BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv3370c Length=1079 Score E Sequences producing significant alignments: (Bits) Value gi|148663233|ref|YP_001284756.1| error-prone DNA polymerase [Myc... 2179 0.0 gi|161350055|ref|NP_338003.2| error-prone DNA polymerase [Mycoba... 2178 0.0 gi|289555649|ref|ZP_06444859.1| DNA polymerase subunit III alpha... 2177 0.0 gi|121639297|ref|YP_979521.1| error-prone DNA polymerase [Mycoba... 2177 0.0 gi|253800417|ref|YP_003033418.1| error-prone DNA polymerase [Myc... 2177 0.0 gi|308371322|ref|ZP_07424578.2| DNA polymerase subunit III alpha... 2176 0.0 gi|308373723|ref|ZP_07433455.2| DNA polymerase subunit III alpha... 2175 0.0 gi|254233973|ref|ZP_04927298.1| DNA polymerase III (alpha chain)... 2153 0.0 gi|339296196|gb|AEJ48307.1| error-prone DNA polymerase [Mycobact... 2023 0.0 gi|289755502|ref|ZP_06514880.1| DNA polymerase III, alpha subuni... 1953 0.0 gi|240173286|ref|ZP_04751944.1| error-prone DNA polymerase [Myco... 1950 0.0 gi|167966837|ref|ZP_02549114.1| error-prone DNA polymerase [Myco... 1929 0.0 gi|118464788|ref|YP_883471.1| error-prone DNA polymerase [Mycoba... 1925 0.0 gi|296168813|ref|ZP_06850495.1| DNA-directed DNA polymerase [Myc... 1923 0.0 gi|254822689|ref|ZP_05227690.1| error-prone DNA polymerase [Myco... 1916 0.0 gi|183981180|ref|YP_001849471.1| DNA polymerase III, alpha chain... 1905 0.0 gi|254776764|ref|ZP_05218280.1| error-prone DNA polymerase [Myco... 1901 0.0 gi|336459770|gb|EGO38685.1| DNA-directed DNA polymerase III PolC... 1901 0.0 gi|118616689|ref|YP_905021.1| error-prone DNA polymerase [Mycoba... 1898 0.0 gi|41409574|ref|NP_962410.1| error-prone DNA polymerase [Mycobac... 1897 0.0 gi|342861583|ref|ZP_08718230.1| error-prone DNA polymerase [Myco... 1891 0.0 gi|126433813|ref|YP_001069504.1| error-prone DNA polymerase [Myc... 1809 0.0 gi|108798154|ref|YP_638351.1| error-prone DNA polymerase [Mycoba... 1807 0.0 gi|120402538|ref|YP_952367.1| error-prone DNA polymerase [Mycoba... 1794 0.0 gi|315445823|ref|YP_004078702.1| DNA polymerase III subunit alph... 1789 0.0 gi|145225469|ref|YP_001136147.1| error-prone DNA polymerase [Myc... 1789 0.0 gi|118471589|ref|YP_886009.1| error-prone DNA polymerase [Mycoba... 1770 0.0 gi|333991845|ref|YP_004524459.1| DNA polymerase III subunit alph... 1698 0.0 gi|254365986|ref|ZP_04982031.1| DNA polymerase III (alpha chain)... 1666 0.0 gi|312140803|ref|YP_004008139.1| DNA polymerase III alpha subuni... 1632 0.0 gi|325675561|ref|ZP_08155245.1| error-prone DNA polymerase [Rhod... 1625 0.0 gi|169630782|ref|YP_001704431.1| error-prone DNA polymerase [Myc... 1608 0.0 gi|229489515|ref|ZP_04383378.1| DNA polymerase III, alpha subuni... 1608 0.0 gi|226305466|ref|YP_002765426.1| error-prone DNA polymerase [Rho... 1592 0.0 gi|226365695|ref|YP_002783478.1| error-prone DNA polymerase [Rho... 1566 0.0 gi|111023190|ref|YP_706162.1| error-prone DNA polymerase [Rhodoc... 1563 0.0 gi|333921664|ref|YP_004495245.1| Error-prone DNA polymerase [Amy... 1556 0.0 gi|289763553|ref|ZP_06522931.1| DNA polymerase III alpha subunit... 1555 0.0 gi|54022882|ref|YP_117124.1| error-prone DNA polymerase [Nocardi... 1515 0.0 gi|296138661|ref|YP_003645904.1| DNA polymerase III subunit alph... 1494 0.0 gi|343926619|ref|ZP_08766117.1| error-prone DNA polymerase [Gord... 1464 0.0 gi|262201696|ref|YP_003272904.1| DNA polymerase III subunit alph... 1457 0.0 gi|307086146|ref|ZP_07495259.1| putative PHP domain protein [Myc... 1454 0.0 gi|326381920|ref|ZP_08203613.1| error-prone DNA polymerase [Gord... 1400 0.0 gi|134103090|ref|YP_001108751.1| error-prone DNA polymerase [Sac... 1366 0.0 gi|258653321|ref|YP_003202477.1| error-prone DNA polymerase [Nak... 1309 0.0 gi|319948757|ref|ZP_08022877.1| error-prone DNA polymerase [Diet... 1302 0.0 gi|302524129|ref|ZP_07276471.1| error-prone DNA polymerase [Stre... 1285 0.0 gi|300782746|ref|YP_003763037.1| DNA polymerase III subunit alph... 1280 0.0 gi|330469312|ref|YP_004407055.1| error-prone DNA polymerase [Ver... 1269 0.0 >gi|148663233|ref|YP_001284756.1| error-prone DNA polymerase [Mycobacterium tuberculosis H37Ra] gi|148824579|ref|YP_001289333.1| error-prone DNA polymerase [Mycobacterium tuberculosis F11] gi|289444974|ref|ZP_06434718.1| DNA polymerase subunit III alpha dnaE2 [Mycobacterium tuberculosis T46] 18 more sequence titles Length=1079 Score = 2179 bits (5647), Expect = 0.0, Method: Compositional matrix adjust. Identities = 1079/1079 (100%), Positives = 1079/1079 (100%), Gaps = 0/1079 (0%) Query 1 MERVLNGKPRHAGVPAFDADGDVPRSRKRGAYQPPGRERVGSSVAYAELHAHSAYSFLDG 60 MERVLNGKPRHAGVPAFDADGDVPRSRKRGAYQPPGRERVGSSVAYAELHAHSAYSFLDG Sbjct 1 MERVLNGKPRHAGVPAFDADGDVPRSRKRGAYQPPGRERVGSSVAYAELHAHSAYSFLDG 60 Query 61 ASTPEELVEEAARLGLCALALTDHDGLYGAVRFAEAAAELDVRTVFGAELSLGATARTER 120 ASTPEELVEEAARLGLCALALTDHDGLYGAVRFAEAAAELDVRTVFGAELSLGATARTER Sbjct 61 ASTPEELVEEAARLGLCALALTDHDGLYGAVRFAEAAAELDVRTVFGAELSLGATARTER 120 Query 121 PDPPGPHLLVLARGPEGYRRLSRQLAAAHLAGGEKGKPRYDFDALTEAAGGHWHILTGCR 180 PDPPGPHLLVLARGPEGYRRLSRQLAAAHLAGGEKGKPRYDFDALTEAAGGHWHILTGCR Sbjct 121 PDPPGPHLLVLARGPEGYRRLSRQLAAAHLAGGEKGKPRYDFDALTEAAGGHWHILTGCR 180 Query 181 KGHVRQALSQGGPAAAQRALADLVDRFTPSRVSIELTHHGHPLDDERNAALAGLAPRFGV 240 KGHVRQALSQGGPAAAQRALADLVDRFTPSRVSIELTHHGHPLDDERNAALAGLAPRFGV Sbjct 181 KGHVRQALSQGGPAAAQRALADLVDRFTPSRVSIELTHHGHPLDDERNAALAGLAPRFGV 240 Query 241 GIVATTGAHFADPSRGRLAMAMAAIRARRSLDSAAGWLAPLGGAHLRSGEEMARLFAWCP 300 GIVATTGAHFADPSRGRLAMAMAAIRARRSLDSAAGWLAPLGGAHLRSGEEMARLFAWCP Sbjct 241 GIVATTGAHFADPSRGRLAMAMAAIRARRSLDSAAGWLAPLGGAHLRSGEEMARLFAWCP 300 Query 301 EAVTAAAELGERCAFGLQLIAPRLPPFDVPDGHTEDSWLRSLVMAGARERYGPPKSAPRA 360 EAVTAAAELGERCAFGLQLIAPRLPPFDVPDGHTEDSWLRSLVMAGARERYGPPKSAPRA Sbjct 301 EAVTAAAELGERCAFGLQLIAPRLPPFDVPDGHTEDSWLRSLVMAGARERYGPPKSAPRA 360 Query 361 YSQIEHELKVIAQLRFPGYFLVVHDITRFCRDNDILCQGRGSAANSAVCYALGVTAVDPV 420 YSQIEHELKVIAQLRFPGYFLVVHDITRFCRDNDILCQGRGSAANSAVCYALGVTAVDPV Sbjct 361 YSQIEHELKVIAQLRFPGYFLVVHDITRFCRDNDILCQGRGSAANSAVCYALGVTAVDPV 420 Query 421 ANELLFERFLSPARDGPPDIDIDIESDQREKVIQYVYHKYGRDYAAQVANVITYRGRSAV 480 ANELLFERFLSPARDGPPDIDIDIESDQREKVIQYVYHKYGRDYAAQVANVITYRGRSAV Sbjct 421 ANELLFERFLSPARDGPPDIDIDIESDQREKVIQYVYHKYGRDYAAQVANVITYRGRSAV 480 Query 481 RDMARALGFSPGQQDAWSKQVSHWTGQADDVDGIPEQVIDLATQIRNLPRHLGIHSGGMV 540 RDMARALGFSPGQQDAWSKQVSHWTGQADDVDGIPEQVIDLATQIRNLPRHLGIHSGGMV Sbjct 481 RDMARALGFSPGQQDAWSKQVSHWTGQADDVDGIPEQVIDLATQIRNLPRHLGIHSGGMV 540 Query 541 ICDRPIADVCPVEWARMANRSVLQWDKDDCAAIGLVKFDLLGLGMLSALHYAKDLVAEHK 600 ICDRPIADVCPVEWARMANRSVLQWDKDDCAAIGLVKFDLLGLGMLSALHYAKDLVAEHK Sbjct 541 ICDRPIADVCPVEWARMANRSVLQWDKDDCAAIGLVKFDLLGLGMLSALHYAKDLVAEHK 600 Query 601 GIEVDLARLDLSEPAVYEMLARADSVGVFQVESRAQMATLPRLKPRVFYDLVVEVALIRP 660 GIEVDLARLDLSEPAVYEMLARADSVGVFQVESRAQMATLPRLKPRVFYDLVVEVALIRP Sbjct 601 GIEVDLARLDLSEPAVYEMLARADSVGVFQVESRAQMATLPRLKPRVFYDLVVEVALIRP 660 Query 661 GPIQGGSVHPYIRRRNGVDPVIYEHPSMAPALRKTLGVPLFQEQLMQLAVDCAGFSAAEA 720 GPIQGGSVHPYIRRRNGVDPVIYEHPSMAPALRKTLGVPLFQEQLMQLAVDCAGFSAAEA Sbjct 661 GPIQGGSVHPYIRRRNGVDPVIYEHPSMAPALRKTLGVPLFQEQLMQLAVDCAGFSAAEA 720 Query 721 DQLRRAMGSKRSTERMRRLRGRFYDGMRALHGAPDEVIDRIYEKLEAFANFGFPESHALS 780 DQLRRAMGSKRSTERMRRLRGRFYDGMRALHGAPDEVIDRIYEKLEAFANFGFPESHALS Sbjct 721 DQLRRAMGSKRSTERMRRLRGRFYDGMRALHGAPDEVIDRIYEKLEAFANFGFPESHALS 780 Query 781 FASLVFYSAWFKLHHPAAFCAALLRAQPMGFYSPQSLVADARRHGVAVHGPCVNASLAHA 840 FASLVFYSAWFKLHHPAAFCAALLRAQPMGFYSPQSLVADARRHGVAVHGPCVNASLAHA Sbjct 781 FASLVFYSAWFKLHHPAAFCAALLRAQPMGFYSPQSLVADARRHGVAVHGPCVNASLAHA 840 Query 841 TCENAGTEVRLGLGAVRYLGAELAEKLVAERTANGPFTSLPDLTSRVQLSVPQVEALATA 900 TCENAGTEVRLGLGAVRYLGAELAEKLVAERTANGPFTSLPDLTSRVQLSVPQVEALATA Sbjct 841 TCENAGTEVRLGLGAVRYLGAELAEKLVAERTANGPFTSLPDLTSRVQLSVPQVEALATA 900 Query 901 GALGCFGMSRREALWAAGAAATGRPDRLPGVGSSSHIPALPGMSELELAAADVWATGVSP 960 GALGCFGMSRREALWAAGAAATGRPDRLPGVGSSSHIPALPGMSELELAAADVWATGVSP Sbjct 901 GALGCFGMSRREALWAAGAAATGRPDRLPGVGSSSHIPALPGMSELELAAADVWATGVSP 960 Query 961 DSYPTQFLRADLDAMGVLPAERLGSVSDGDRVLIAGAVTHRQRPATAQGVTFINLEDETG 1020 DSYPTQFLRADLDAMGVLPAERLGSVSDGDRVLIAGAVTHRQRPATAQGVTFINLEDETG Sbjct 961 DSYPTQFLRADLDAMGVLPAERLGSVSDGDRVLIAGAVTHRQRPATAQGVTFINLEDETG 1020 Query 1021 MVNVLCTPGVWARHRKLAHTAPALLIRGQVQNASGAITVVAERMGRLTLAVGARSRDFR 1079 MVNVLCTPGVWARHRKLAHTAPALLIRGQVQNASGAITVVAERMGRLTLAVGARSRDFR Sbjct 1021 MVNVLCTPGVWARHRKLAHTAPALLIRGQVQNASGAITVVAERMGRLTLAVGARSRDFR 1079 >gi|161350055|ref|NP_338003.2| error-prone DNA polymerase [Mycobacterium tuberculosis CDC1551] gi|161352461|ref|NP_217887.2| error-prone DNA polymerase [Mycobacterium tuberculosis H37Rv] gi|161511527|ref|NP_857046.2| error-prone DNA polymerase [Mycobacterium bovis AF2122/97] 8 more sequence titles Length=1091 Score = 2178 bits (5644), Expect = 0.0, Method: Compositional matrix adjust. Identities = 1079/1079 (100%), Positives = 1079/1079 (100%), Gaps = 0/1079 (0%) Query 1 MERVLNGKPRHAGVPAFDADGDVPRSRKRGAYQPPGRERVGSSVAYAELHAHSAYSFLDG 60 MERVLNGKPRHAGVPAFDADGDVPRSRKRGAYQPPGRERVGSSVAYAELHAHSAYSFLDG Sbjct 13 MERVLNGKPRHAGVPAFDADGDVPRSRKRGAYQPPGRERVGSSVAYAELHAHSAYSFLDG 72 Query 61 ASTPEELVEEAARLGLCALALTDHDGLYGAVRFAEAAAELDVRTVFGAELSLGATARTER 120 ASTPEELVEEAARLGLCALALTDHDGLYGAVRFAEAAAELDVRTVFGAELSLGATARTER Sbjct 73 ASTPEELVEEAARLGLCALALTDHDGLYGAVRFAEAAAELDVRTVFGAELSLGATARTER 132 Query 121 PDPPGPHLLVLARGPEGYRRLSRQLAAAHLAGGEKGKPRYDFDALTEAAGGHWHILTGCR 180 PDPPGPHLLVLARGPEGYRRLSRQLAAAHLAGGEKGKPRYDFDALTEAAGGHWHILTGCR Sbjct 133 PDPPGPHLLVLARGPEGYRRLSRQLAAAHLAGGEKGKPRYDFDALTEAAGGHWHILTGCR 192 Query 181 KGHVRQALSQGGPAAAQRALADLVDRFTPSRVSIELTHHGHPLDDERNAALAGLAPRFGV 240 KGHVRQALSQGGPAAAQRALADLVDRFTPSRVSIELTHHGHPLDDERNAALAGLAPRFGV Sbjct 193 KGHVRQALSQGGPAAAQRALADLVDRFTPSRVSIELTHHGHPLDDERNAALAGLAPRFGV 252 Query 241 GIVATTGAHFADPSRGRLAMAMAAIRARRSLDSAAGWLAPLGGAHLRSGEEMARLFAWCP 300 GIVATTGAHFADPSRGRLAMAMAAIRARRSLDSAAGWLAPLGGAHLRSGEEMARLFAWCP Sbjct 253 GIVATTGAHFADPSRGRLAMAMAAIRARRSLDSAAGWLAPLGGAHLRSGEEMARLFAWCP 312 Query 301 EAVTAAAELGERCAFGLQLIAPRLPPFDVPDGHTEDSWLRSLVMAGARERYGPPKSAPRA 360 EAVTAAAELGERCAFGLQLIAPRLPPFDVPDGHTEDSWLRSLVMAGARERYGPPKSAPRA Sbjct 313 EAVTAAAELGERCAFGLQLIAPRLPPFDVPDGHTEDSWLRSLVMAGARERYGPPKSAPRA 372 Query 361 YSQIEHELKVIAQLRFPGYFLVVHDITRFCRDNDILCQGRGSAANSAVCYALGVTAVDPV 420 YSQIEHELKVIAQLRFPGYFLVVHDITRFCRDNDILCQGRGSAANSAVCYALGVTAVDPV Sbjct 373 YSQIEHELKVIAQLRFPGYFLVVHDITRFCRDNDILCQGRGSAANSAVCYALGVTAVDPV 432 Query 421 ANELLFERFLSPARDGPPDIDIDIESDQREKVIQYVYHKYGRDYAAQVANVITYRGRSAV 480 ANELLFERFLSPARDGPPDIDIDIESDQREKVIQYVYHKYGRDYAAQVANVITYRGRSAV Sbjct 433 ANELLFERFLSPARDGPPDIDIDIESDQREKVIQYVYHKYGRDYAAQVANVITYRGRSAV 492 Query 481 RDMARALGFSPGQQDAWSKQVSHWTGQADDVDGIPEQVIDLATQIRNLPRHLGIHSGGMV 540 RDMARALGFSPGQQDAWSKQVSHWTGQADDVDGIPEQVIDLATQIRNLPRHLGIHSGGMV Sbjct 493 RDMARALGFSPGQQDAWSKQVSHWTGQADDVDGIPEQVIDLATQIRNLPRHLGIHSGGMV 552 Query 541 ICDRPIADVCPVEWARMANRSVLQWDKDDCAAIGLVKFDLLGLGMLSALHYAKDLVAEHK 600 ICDRPIADVCPVEWARMANRSVLQWDKDDCAAIGLVKFDLLGLGMLSALHYAKDLVAEHK Sbjct 553 ICDRPIADVCPVEWARMANRSVLQWDKDDCAAIGLVKFDLLGLGMLSALHYAKDLVAEHK 612 Query 601 GIEVDLARLDLSEPAVYEMLARADSVGVFQVESRAQMATLPRLKPRVFYDLVVEVALIRP 660 GIEVDLARLDLSEPAVYEMLARADSVGVFQVESRAQMATLPRLKPRVFYDLVVEVALIRP Sbjct 613 GIEVDLARLDLSEPAVYEMLARADSVGVFQVESRAQMATLPRLKPRVFYDLVVEVALIRP 672 Query 661 GPIQGGSVHPYIRRRNGVDPVIYEHPSMAPALRKTLGVPLFQEQLMQLAVDCAGFSAAEA 720 GPIQGGSVHPYIRRRNGVDPVIYEHPSMAPALRKTLGVPLFQEQLMQLAVDCAGFSAAEA Sbjct 673 GPIQGGSVHPYIRRRNGVDPVIYEHPSMAPALRKTLGVPLFQEQLMQLAVDCAGFSAAEA 732 Query 721 DQLRRAMGSKRSTERMRRLRGRFYDGMRALHGAPDEVIDRIYEKLEAFANFGFPESHALS 780 DQLRRAMGSKRSTERMRRLRGRFYDGMRALHGAPDEVIDRIYEKLEAFANFGFPESHALS Sbjct 733 DQLRRAMGSKRSTERMRRLRGRFYDGMRALHGAPDEVIDRIYEKLEAFANFGFPESHALS 792 Query 781 FASLVFYSAWFKLHHPAAFCAALLRAQPMGFYSPQSLVADARRHGVAVHGPCVNASLAHA 840 FASLVFYSAWFKLHHPAAFCAALLRAQPMGFYSPQSLVADARRHGVAVHGPCVNASLAHA Sbjct 793 FASLVFYSAWFKLHHPAAFCAALLRAQPMGFYSPQSLVADARRHGVAVHGPCVNASLAHA 852 Query 841 TCENAGTEVRLGLGAVRYLGAELAEKLVAERTANGPFTSLPDLTSRVQLSVPQVEALATA 900 TCENAGTEVRLGLGAVRYLGAELAEKLVAERTANGPFTSLPDLTSRVQLSVPQVEALATA Sbjct 853 TCENAGTEVRLGLGAVRYLGAELAEKLVAERTANGPFTSLPDLTSRVQLSVPQVEALATA 912 Query 901 GALGCFGMSRREALWAAGAAATGRPDRLPGVGSSSHIPALPGMSELELAAADVWATGVSP 960 GALGCFGMSRREALWAAGAAATGRPDRLPGVGSSSHIPALPGMSELELAAADVWATGVSP Sbjct 913 GALGCFGMSRREALWAAGAAATGRPDRLPGVGSSSHIPALPGMSELELAAADVWATGVSP 972 Query 961 DSYPTQFLRADLDAMGVLPAERLGSVSDGDRVLIAGAVTHRQRPATAQGVTFINLEDETG 1020 DSYPTQFLRADLDAMGVLPAERLGSVSDGDRVLIAGAVTHRQRPATAQGVTFINLEDETG Sbjct 973 DSYPTQFLRADLDAMGVLPAERLGSVSDGDRVLIAGAVTHRQRPATAQGVTFINLEDETG 1032 Query 1021 MVNVLCTPGVWARHRKLAHTAPALLIRGQVQNASGAITVVAERMGRLTLAVGARSRDFR 1079 MVNVLCTPGVWARHRKLAHTAPALLIRGQVQNASGAITVVAERMGRLTLAVGARSRDFR Sbjct 1033 MVNVLCTPGVWARHRKLAHTAPALLIRGQVQNASGAITVVAERMGRLTLAVGARSRDFR 1091 >gi|289555649|ref|ZP_06444859.1| DNA polymerase subunit III alpha dnaE2 [Mycobacterium tuberculosis KZN 605] gi|289440281|gb|EFD22774.1| DNA polymerase subunit III alpha dnaE2 [Mycobacterium tuberculosis KZN 605] Length=1094 Score = 2177 bits (5642), Expect = 0.0, Method: Compositional matrix adjust. Identities = 1079/1079 (100%), Positives = 1079/1079 (100%), Gaps = 0/1079 (0%) Query 1 MERVLNGKPRHAGVPAFDADGDVPRSRKRGAYQPPGRERVGSSVAYAELHAHSAYSFLDG 60 MERVLNGKPRHAGVPAFDADGDVPRSRKRGAYQPPGRERVGSSVAYAELHAHSAYSFLDG Sbjct 16 MERVLNGKPRHAGVPAFDADGDVPRSRKRGAYQPPGRERVGSSVAYAELHAHSAYSFLDG 75 Query 61 ASTPEELVEEAARLGLCALALTDHDGLYGAVRFAEAAAELDVRTVFGAELSLGATARTER 120 ASTPEELVEEAARLGLCALALTDHDGLYGAVRFAEAAAELDVRTVFGAELSLGATARTER Sbjct 76 ASTPEELVEEAARLGLCALALTDHDGLYGAVRFAEAAAELDVRTVFGAELSLGATARTER 135 Query 121 PDPPGPHLLVLARGPEGYRRLSRQLAAAHLAGGEKGKPRYDFDALTEAAGGHWHILTGCR 180 PDPPGPHLLVLARGPEGYRRLSRQLAAAHLAGGEKGKPRYDFDALTEAAGGHWHILTGCR Sbjct 136 PDPPGPHLLVLARGPEGYRRLSRQLAAAHLAGGEKGKPRYDFDALTEAAGGHWHILTGCR 195 Query 181 KGHVRQALSQGGPAAAQRALADLVDRFTPSRVSIELTHHGHPLDDERNAALAGLAPRFGV 240 KGHVRQALSQGGPAAAQRALADLVDRFTPSRVSIELTHHGHPLDDERNAALAGLAPRFGV Sbjct 196 KGHVRQALSQGGPAAAQRALADLVDRFTPSRVSIELTHHGHPLDDERNAALAGLAPRFGV 255 Query 241 GIVATTGAHFADPSRGRLAMAMAAIRARRSLDSAAGWLAPLGGAHLRSGEEMARLFAWCP 300 GIVATTGAHFADPSRGRLAMAMAAIRARRSLDSAAGWLAPLGGAHLRSGEEMARLFAWCP Sbjct 256 GIVATTGAHFADPSRGRLAMAMAAIRARRSLDSAAGWLAPLGGAHLRSGEEMARLFAWCP 315 Query 301 EAVTAAAELGERCAFGLQLIAPRLPPFDVPDGHTEDSWLRSLVMAGARERYGPPKSAPRA 360 EAVTAAAELGERCAFGLQLIAPRLPPFDVPDGHTEDSWLRSLVMAGARERYGPPKSAPRA Sbjct 316 EAVTAAAELGERCAFGLQLIAPRLPPFDVPDGHTEDSWLRSLVMAGARERYGPPKSAPRA 375 Query 361 YSQIEHELKVIAQLRFPGYFLVVHDITRFCRDNDILCQGRGSAANSAVCYALGVTAVDPV 420 YSQIEHELKVIAQLRFPGYFLVVHDITRFCRDNDILCQGRGSAANSAVCYALGVTAVDPV Sbjct 376 YSQIEHELKVIAQLRFPGYFLVVHDITRFCRDNDILCQGRGSAANSAVCYALGVTAVDPV 435 Query 421 ANELLFERFLSPARDGPPDIDIDIESDQREKVIQYVYHKYGRDYAAQVANVITYRGRSAV 480 ANELLFERFLSPARDGPPDIDIDIESDQREKVIQYVYHKYGRDYAAQVANVITYRGRSAV Sbjct 436 ANELLFERFLSPARDGPPDIDIDIESDQREKVIQYVYHKYGRDYAAQVANVITYRGRSAV 495 Query 481 RDMARALGFSPGQQDAWSKQVSHWTGQADDVDGIPEQVIDLATQIRNLPRHLGIHSGGMV 540 RDMARALGFSPGQQDAWSKQVSHWTGQADDVDGIPEQVIDLATQIRNLPRHLGIHSGGMV Sbjct 496 RDMARALGFSPGQQDAWSKQVSHWTGQADDVDGIPEQVIDLATQIRNLPRHLGIHSGGMV 555 Query 541 ICDRPIADVCPVEWARMANRSVLQWDKDDCAAIGLVKFDLLGLGMLSALHYAKDLVAEHK 600 ICDRPIADVCPVEWARMANRSVLQWDKDDCAAIGLVKFDLLGLGMLSALHYAKDLVAEHK Sbjct 556 ICDRPIADVCPVEWARMANRSVLQWDKDDCAAIGLVKFDLLGLGMLSALHYAKDLVAEHK 615 Query 601 GIEVDLARLDLSEPAVYEMLARADSVGVFQVESRAQMATLPRLKPRVFYDLVVEVALIRP 660 GIEVDLARLDLSEPAVYEMLARADSVGVFQVESRAQMATLPRLKPRVFYDLVVEVALIRP Sbjct 616 GIEVDLARLDLSEPAVYEMLARADSVGVFQVESRAQMATLPRLKPRVFYDLVVEVALIRP 675 Query 661 GPIQGGSVHPYIRRRNGVDPVIYEHPSMAPALRKTLGVPLFQEQLMQLAVDCAGFSAAEA 720 GPIQGGSVHPYIRRRNGVDPVIYEHPSMAPALRKTLGVPLFQEQLMQLAVDCAGFSAAEA Sbjct 676 GPIQGGSVHPYIRRRNGVDPVIYEHPSMAPALRKTLGVPLFQEQLMQLAVDCAGFSAAEA 735 Query 721 DQLRRAMGSKRSTERMRRLRGRFYDGMRALHGAPDEVIDRIYEKLEAFANFGFPESHALS 780 DQLRRAMGSKRSTERMRRLRGRFYDGMRALHGAPDEVIDRIYEKLEAFANFGFPESHALS Sbjct 736 DQLRRAMGSKRSTERMRRLRGRFYDGMRALHGAPDEVIDRIYEKLEAFANFGFPESHALS 795 Query 781 FASLVFYSAWFKLHHPAAFCAALLRAQPMGFYSPQSLVADARRHGVAVHGPCVNASLAHA 840 FASLVFYSAWFKLHHPAAFCAALLRAQPMGFYSPQSLVADARRHGVAVHGPCVNASLAHA Sbjct 796 FASLVFYSAWFKLHHPAAFCAALLRAQPMGFYSPQSLVADARRHGVAVHGPCVNASLAHA 855 Query 841 TCENAGTEVRLGLGAVRYLGAELAEKLVAERTANGPFTSLPDLTSRVQLSVPQVEALATA 900 TCENAGTEVRLGLGAVRYLGAELAEKLVAERTANGPFTSLPDLTSRVQLSVPQVEALATA Sbjct 856 TCENAGTEVRLGLGAVRYLGAELAEKLVAERTANGPFTSLPDLTSRVQLSVPQVEALATA 915 Query 901 GALGCFGMSRREALWAAGAAATGRPDRLPGVGSSSHIPALPGMSELELAAADVWATGVSP 960 GALGCFGMSRREALWAAGAAATGRPDRLPGVGSSSHIPALPGMSELELAAADVWATGVSP Sbjct 916 GALGCFGMSRREALWAAGAAATGRPDRLPGVGSSSHIPALPGMSELELAAADVWATGVSP 975 Query 961 DSYPTQFLRADLDAMGVLPAERLGSVSDGDRVLIAGAVTHRQRPATAQGVTFINLEDETG 1020 DSYPTQFLRADLDAMGVLPAERLGSVSDGDRVLIAGAVTHRQRPATAQGVTFINLEDETG Sbjct 976 DSYPTQFLRADLDAMGVLPAERLGSVSDGDRVLIAGAVTHRQRPATAQGVTFINLEDETG 1035 Query 1021 MVNVLCTPGVWARHRKLAHTAPALLIRGQVQNASGAITVVAERMGRLTLAVGARSRDFR 1079 MVNVLCTPGVWARHRKLAHTAPALLIRGQVQNASGAITVVAERMGRLTLAVGARSRDFR Sbjct 1036 MVNVLCTPGVWARHRKLAHTAPALLIRGQVQNASGAITVVAERMGRLTLAVGARSRDFR 1094 >gi|121639297|ref|YP_979521.1| error-prone DNA polymerase [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224991794|ref|YP_002646483.1| error-prone DNA polymerase [Mycobacterium bovis BCG str. Tokyo 172] gi|121494945|emb|CAL73431.1| Probable dna polymerase III (alpha chain) dnaE2 [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224774909|dbj|BAH27715.1| error-prone DNA polymerase [Mycobacterium bovis BCG str. Tokyo 172] gi|341603322|emb|CCC66003.1| probable DNA polymerase III (alpha chain) dnaE2 [Mycobacterium bovis BCG str. Moreau RDJ] Length=1079 Score = 2177 bits (5642), Expect = 0.0, Method: Compositional matrix adjust. Identities = 1078/1079 (99%), Positives = 1079/1079 (100%), Gaps = 0/1079 (0%) Query 1 MERVLNGKPRHAGVPAFDADGDVPRSRKRGAYQPPGRERVGSSVAYAELHAHSAYSFLDG 60 MERVLNGKPRHAGVPAFDADGDVPRSRKRGAYQPPGRERVGSSVAYAELHAHSAYSFLDG Sbjct 1 MERVLNGKPRHAGVPAFDADGDVPRSRKRGAYQPPGRERVGSSVAYAELHAHSAYSFLDG 60 Query 61 ASTPEELVEEAARLGLCALALTDHDGLYGAVRFAEAAAELDVRTVFGAELSLGATARTER 120 ASTPEELVEEAARLGLCALALTDHDGLYGAVRFAEAAAELDVRTVFGAELSLGATARTER Sbjct 61 ASTPEELVEEAARLGLCALALTDHDGLYGAVRFAEAAAELDVRTVFGAELSLGATARTER 120 Query 121 PDPPGPHLLVLARGPEGYRRLSRQLAAAHLAGGEKGKPRYDFDALTEAAGGHWHILTGCR 180 PDPPGPHLLVLARGPEGYRRLSRQLAAAHLAGGEKGKPRYDFDALTEAAGGHWHILTGCR Sbjct 121 PDPPGPHLLVLARGPEGYRRLSRQLAAAHLAGGEKGKPRYDFDALTEAAGGHWHILTGCR 180 Query 181 KGHVRQALSQGGPAAAQRALADLVDRFTPSRVSIELTHHGHPLDDERNAALAGLAPRFGV 240 KGHVRQALSQGGPAAAQRALADLVDRFTPSRVSIELTHHGHPLDDERNAALAGLAPRFGV Sbjct 181 KGHVRQALSQGGPAAAQRALADLVDRFTPSRVSIELTHHGHPLDDERNAALAGLAPRFGV 240 Query 241 GIVATTGAHFADPSRGRLAMAMAAIRARRSLDSAAGWLAPLGGAHLRSGEEMARLFAWCP 300 GIVATTGAHFADPSRGRLAMAMAAIRARRSLDSAAGWLAPLGGAHLRSGEEMARLFAWCP Sbjct 241 GIVATTGAHFADPSRGRLAMAMAAIRARRSLDSAAGWLAPLGGAHLRSGEEMARLFAWCP 300 Query 301 EAVTAAAELGERCAFGLQLIAPRLPPFDVPDGHTEDSWLRSLVMAGARERYGPPKSAPRA 360 EAVTAAAELGERCAFGLQLIAPRLPPFDVPDGHTEDSWLRSLVMAGARERYGPPKSAPRA Sbjct 301 EAVTAAAELGERCAFGLQLIAPRLPPFDVPDGHTEDSWLRSLVMAGARERYGPPKSAPRA 360 Query 361 YSQIEHELKVIAQLRFPGYFLVVHDITRFCRDNDILCQGRGSAANSAVCYALGVTAVDPV 420 YSQIEHELKVIAQLRFPGYFLVVHDITRFCRDNDILCQGRGSAANSAVCYALGVTAVDPV Sbjct 361 YSQIEHELKVIAQLRFPGYFLVVHDITRFCRDNDILCQGRGSAANSAVCYALGVTAVDPV 420 Query 421 ANELLFERFLSPARDGPPDIDIDIESDQREKVIQYVYHKYGRDYAAQVANVITYRGRSAV 480 ANELLFERFLSPARDGPPDIDIDIESDQREKVIQYVYHKYGRDYAAQVANVITYRGRSAV Sbjct 421 ANELLFERFLSPARDGPPDIDIDIESDQREKVIQYVYHKYGRDYAAQVANVITYRGRSAV 480 Query 481 RDMARALGFSPGQQDAWSKQVSHWTGQADDVDGIPEQVIDLATQIRNLPRHLGIHSGGMV 540 RDMARALGFSPGQQDAWSKQVSHWTGQADDVDGIPEQVIDLATQIR+LPRHLGIHSGGMV Sbjct 481 RDMARALGFSPGQQDAWSKQVSHWTGQADDVDGIPEQVIDLATQIRSLPRHLGIHSGGMV 540 Query 541 ICDRPIADVCPVEWARMANRSVLQWDKDDCAAIGLVKFDLLGLGMLSALHYAKDLVAEHK 600 ICDRPIADVCPVEWARMANRSVLQWDKDDCAAIGLVKFDLLGLGMLSALHYAKDLVAEHK Sbjct 541 ICDRPIADVCPVEWARMANRSVLQWDKDDCAAIGLVKFDLLGLGMLSALHYAKDLVAEHK 600 Query 601 GIEVDLARLDLSEPAVYEMLARADSVGVFQVESRAQMATLPRLKPRVFYDLVVEVALIRP 660 GIEVDLARLDLSEPAVYEMLARADSVGVFQVESRAQMATLPRLKPRVFYDLVVEVALIRP Sbjct 601 GIEVDLARLDLSEPAVYEMLARADSVGVFQVESRAQMATLPRLKPRVFYDLVVEVALIRP 660 Query 661 GPIQGGSVHPYIRRRNGVDPVIYEHPSMAPALRKTLGVPLFQEQLMQLAVDCAGFSAAEA 720 GPIQGGSVHPYIRRRNGVDPVIYEHPSMAPALRKTLGVPLFQEQLMQLAVDCAGFSAAEA Sbjct 661 GPIQGGSVHPYIRRRNGVDPVIYEHPSMAPALRKTLGVPLFQEQLMQLAVDCAGFSAAEA 720 Query 721 DQLRRAMGSKRSTERMRRLRGRFYDGMRALHGAPDEVIDRIYEKLEAFANFGFPESHALS 780 DQLRRAMGSKRSTERMRRLRGRFYDGMRALHGAPDEVIDRIYEKLEAFANFGFPESHALS Sbjct 721 DQLRRAMGSKRSTERMRRLRGRFYDGMRALHGAPDEVIDRIYEKLEAFANFGFPESHALS 780 Query 781 FASLVFYSAWFKLHHPAAFCAALLRAQPMGFYSPQSLVADARRHGVAVHGPCVNASLAHA 840 FASLVFYSAWFKLHHPAAFCAALLRAQPMGFYSPQSLVADARRHGVAVHGPCVNASLAHA Sbjct 781 FASLVFYSAWFKLHHPAAFCAALLRAQPMGFYSPQSLVADARRHGVAVHGPCVNASLAHA 840 Query 841 TCENAGTEVRLGLGAVRYLGAELAEKLVAERTANGPFTSLPDLTSRVQLSVPQVEALATA 900 TCENAGTEVRLGLGAVRYLGAELAEKLVAERTANGPFTSLPDLTSRVQLSVPQVEALATA Sbjct 841 TCENAGTEVRLGLGAVRYLGAELAEKLVAERTANGPFTSLPDLTSRVQLSVPQVEALATA 900 Query 901 GALGCFGMSRREALWAAGAAATGRPDRLPGVGSSSHIPALPGMSELELAAADVWATGVSP 960 GALGCFGMSRREALWAAGAAATGRPDRLPGVGSSSHIPALPGMSELELAAADVWATGVSP Sbjct 901 GALGCFGMSRREALWAAGAAATGRPDRLPGVGSSSHIPALPGMSELELAAADVWATGVSP 960 Query 961 DSYPTQFLRADLDAMGVLPAERLGSVSDGDRVLIAGAVTHRQRPATAQGVTFINLEDETG 1020 DSYPTQFLRADLDAMGVLPAERLGSVSDGDRVLIAGAVTHRQRPATAQGVTFINLEDETG Sbjct 961 DSYPTQFLRADLDAMGVLPAERLGSVSDGDRVLIAGAVTHRQRPATAQGVTFINLEDETG 1020 Query 1021 MVNVLCTPGVWARHRKLAHTAPALLIRGQVQNASGAITVVAERMGRLTLAVGARSRDFR 1079 MVNVLCTPGVWARHRKLAHTAPALLIRGQVQNASGAITVVAERMGRLTLAVGARSRDFR Sbjct 1021 MVNVLCTPGVWARHRKLAHTAPALLIRGQVQNASGAITVVAERMGRLTLAVGARSRDFR 1079 >gi|253800417|ref|YP_003033418.1| error-prone DNA polymerase [Mycobacterium tuberculosis KZN 1435] gi|289747192|ref|ZP_06506570.1| error-prone DNA polymerase [Mycobacterium tuberculosis 02_1987] gi|308379492|ref|ZP_07486489.2| DNA polymerase subunit III alpha dnaE2 [Mycobacterium tuberculosis SUMu010] 8 more sequence titles Length=1098 Score = 2177 bits (5641), Expect = 0.0, Method: Compositional matrix adjust. Identities = 1079/1079 (100%), Positives = 1079/1079 (100%), Gaps = 0/1079 (0%) Query 1 MERVLNGKPRHAGVPAFDADGDVPRSRKRGAYQPPGRERVGSSVAYAELHAHSAYSFLDG 60 MERVLNGKPRHAGVPAFDADGDVPRSRKRGAYQPPGRERVGSSVAYAELHAHSAYSFLDG Sbjct 20 MERVLNGKPRHAGVPAFDADGDVPRSRKRGAYQPPGRERVGSSVAYAELHAHSAYSFLDG 79 Query 61 ASTPEELVEEAARLGLCALALTDHDGLYGAVRFAEAAAELDVRTVFGAELSLGATARTER 120 ASTPEELVEEAARLGLCALALTDHDGLYGAVRFAEAAAELDVRTVFGAELSLGATARTER Sbjct 80 ASTPEELVEEAARLGLCALALTDHDGLYGAVRFAEAAAELDVRTVFGAELSLGATARTER 139 Query 121 PDPPGPHLLVLARGPEGYRRLSRQLAAAHLAGGEKGKPRYDFDALTEAAGGHWHILTGCR 180 PDPPGPHLLVLARGPEGYRRLSRQLAAAHLAGGEKGKPRYDFDALTEAAGGHWHILTGCR Sbjct 140 PDPPGPHLLVLARGPEGYRRLSRQLAAAHLAGGEKGKPRYDFDALTEAAGGHWHILTGCR 199 Query 181 KGHVRQALSQGGPAAAQRALADLVDRFTPSRVSIELTHHGHPLDDERNAALAGLAPRFGV 240 KGHVRQALSQGGPAAAQRALADLVDRFTPSRVSIELTHHGHPLDDERNAALAGLAPRFGV Sbjct 200 KGHVRQALSQGGPAAAQRALADLVDRFTPSRVSIELTHHGHPLDDERNAALAGLAPRFGV 259 Query 241 GIVATTGAHFADPSRGRLAMAMAAIRARRSLDSAAGWLAPLGGAHLRSGEEMARLFAWCP 300 GIVATTGAHFADPSRGRLAMAMAAIRARRSLDSAAGWLAPLGGAHLRSGEEMARLFAWCP Sbjct 260 GIVATTGAHFADPSRGRLAMAMAAIRARRSLDSAAGWLAPLGGAHLRSGEEMARLFAWCP 319 Query 301 EAVTAAAELGERCAFGLQLIAPRLPPFDVPDGHTEDSWLRSLVMAGARERYGPPKSAPRA 360 EAVTAAAELGERCAFGLQLIAPRLPPFDVPDGHTEDSWLRSLVMAGARERYGPPKSAPRA Sbjct 320 EAVTAAAELGERCAFGLQLIAPRLPPFDVPDGHTEDSWLRSLVMAGARERYGPPKSAPRA 379 Query 361 YSQIEHELKVIAQLRFPGYFLVVHDITRFCRDNDILCQGRGSAANSAVCYALGVTAVDPV 420 YSQIEHELKVIAQLRFPGYFLVVHDITRFCRDNDILCQGRGSAANSAVCYALGVTAVDPV Sbjct 380 YSQIEHELKVIAQLRFPGYFLVVHDITRFCRDNDILCQGRGSAANSAVCYALGVTAVDPV 439 Query 421 ANELLFERFLSPARDGPPDIDIDIESDQREKVIQYVYHKYGRDYAAQVANVITYRGRSAV 480 ANELLFERFLSPARDGPPDIDIDIESDQREKVIQYVYHKYGRDYAAQVANVITYRGRSAV Sbjct 440 ANELLFERFLSPARDGPPDIDIDIESDQREKVIQYVYHKYGRDYAAQVANVITYRGRSAV 499 Query 481 RDMARALGFSPGQQDAWSKQVSHWTGQADDVDGIPEQVIDLATQIRNLPRHLGIHSGGMV 540 RDMARALGFSPGQQDAWSKQVSHWTGQADDVDGIPEQVIDLATQIRNLPRHLGIHSGGMV Sbjct 500 RDMARALGFSPGQQDAWSKQVSHWTGQADDVDGIPEQVIDLATQIRNLPRHLGIHSGGMV 559 Query 541 ICDRPIADVCPVEWARMANRSVLQWDKDDCAAIGLVKFDLLGLGMLSALHYAKDLVAEHK 600 ICDRPIADVCPVEWARMANRSVLQWDKDDCAAIGLVKFDLLGLGMLSALHYAKDLVAEHK Sbjct 560 ICDRPIADVCPVEWARMANRSVLQWDKDDCAAIGLVKFDLLGLGMLSALHYAKDLVAEHK 619 Query 601 GIEVDLARLDLSEPAVYEMLARADSVGVFQVESRAQMATLPRLKPRVFYDLVVEVALIRP 660 GIEVDLARLDLSEPAVYEMLARADSVGVFQVESRAQMATLPRLKPRVFYDLVVEVALIRP Sbjct 620 GIEVDLARLDLSEPAVYEMLARADSVGVFQVESRAQMATLPRLKPRVFYDLVVEVALIRP 679 Query 661 GPIQGGSVHPYIRRRNGVDPVIYEHPSMAPALRKTLGVPLFQEQLMQLAVDCAGFSAAEA 720 GPIQGGSVHPYIRRRNGVDPVIYEHPSMAPALRKTLGVPLFQEQLMQLAVDCAGFSAAEA Sbjct 680 GPIQGGSVHPYIRRRNGVDPVIYEHPSMAPALRKTLGVPLFQEQLMQLAVDCAGFSAAEA 739 Query 721 DQLRRAMGSKRSTERMRRLRGRFYDGMRALHGAPDEVIDRIYEKLEAFANFGFPESHALS 780 DQLRRAMGSKRSTERMRRLRGRFYDGMRALHGAPDEVIDRIYEKLEAFANFGFPESHALS Sbjct 740 DQLRRAMGSKRSTERMRRLRGRFYDGMRALHGAPDEVIDRIYEKLEAFANFGFPESHALS 799 Query 781 FASLVFYSAWFKLHHPAAFCAALLRAQPMGFYSPQSLVADARRHGVAVHGPCVNASLAHA 840 FASLVFYSAWFKLHHPAAFCAALLRAQPMGFYSPQSLVADARRHGVAVHGPCVNASLAHA Sbjct 800 FASLVFYSAWFKLHHPAAFCAALLRAQPMGFYSPQSLVADARRHGVAVHGPCVNASLAHA 859 Query 841 TCENAGTEVRLGLGAVRYLGAELAEKLVAERTANGPFTSLPDLTSRVQLSVPQVEALATA 900 TCENAGTEVRLGLGAVRYLGAELAEKLVAERTANGPFTSLPDLTSRVQLSVPQVEALATA Sbjct 860 TCENAGTEVRLGLGAVRYLGAELAEKLVAERTANGPFTSLPDLTSRVQLSVPQVEALATA 919 Query 901 GALGCFGMSRREALWAAGAAATGRPDRLPGVGSSSHIPALPGMSELELAAADVWATGVSP 960 GALGCFGMSRREALWAAGAAATGRPDRLPGVGSSSHIPALPGMSELELAAADVWATGVSP Sbjct 920 GALGCFGMSRREALWAAGAAATGRPDRLPGVGSSSHIPALPGMSELELAAADVWATGVSP 979 Query 961 DSYPTQFLRADLDAMGVLPAERLGSVSDGDRVLIAGAVTHRQRPATAQGVTFINLEDETG 1020 DSYPTQFLRADLDAMGVLPAERLGSVSDGDRVLIAGAVTHRQRPATAQGVTFINLEDETG Sbjct 980 DSYPTQFLRADLDAMGVLPAERLGSVSDGDRVLIAGAVTHRQRPATAQGVTFINLEDETG 1039 Query 1021 MVNVLCTPGVWARHRKLAHTAPALLIRGQVQNASGAITVVAERMGRLTLAVGARSRDFR 1079 MVNVLCTPGVWARHRKLAHTAPALLIRGQVQNASGAITVVAERMGRLTLAVGARSRDFR Sbjct 1040 MVNVLCTPGVWARHRKLAHTAPALLIRGQVQNASGAITVVAERMGRLTLAVGARSRDFR 1098 >gi|308371322|ref|ZP_07424578.2| DNA polymerase subunit III alpha dnaE2 [Mycobacterium tuberculosis SUMu003] gi|308372518|ref|ZP_07428948.2| DNA polymerase subunit III alpha dnaE2 [Mycobacterium tuberculosis SUMu004] gi|308376093|ref|ZP_07446045.2| DNA polymerase subunit III alpha dnaE2 [Mycobacterium tuberculosis SUMu007] 7 more sequence titles Length=1091 Score = 2176 bits (5638), Expect = 0.0, Method: Compositional matrix adjust. Identities = 1078/1079 (99%), Positives = 1078/1079 (99%), Gaps = 0/1079 (0%) Query 1 MERVLNGKPRHAGVPAFDADGDVPRSRKRGAYQPPGRERVGSSVAYAELHAHSAYSFLDG 60 MERVLNGKPRHAGVPAFDADGDVPRSRKRGAYQPPGRERVGSSVAYAELHAHSAYSFLDG Sbjct 13 MERVLNGKPRHAGVPAFDADGDVPRSRKRGAYQPPGRERVGSSVAYAELHAHSAYSFLDG 72 Query 61 ASTPEELVEEAARLGLCALALTDHDGLYGAVRFAEAAAELDVRTVFGAELSLGATARTER 120 ASTPEELVEEAARLGLCALALTDHDGLYGAVRFAEAAAELDVRTVFGAELSLGATARTER Sbjct 73 ASTPEELVEEAARLGLCALALTDHDGLYGAVRFAEAAAELDVRTVFGAELSLGATARTER 132 Query 121 PDPPGPHLLVLARGPEGYRRLSRQLAAAHLAGGEKGKPRYDFDALTEAAGGHWHILTGCR 180 PDPPGPHLLVLARGPEGYRRLSRQLAAAHLAGGEKGKPRYDFDALTEAAGGHWHILTGCR Sbjct 133 PDPPGPHLLVLARGPEGYRRLSRQLAAAHLAGGEKGKPRYDFDALTEAAGGHWHILTGCR 192 Query 181 KGHVRQALSQGGPAAAQRALADLVDRFTPSRVSIELTHHGHPLDDERNAALAGLAPRFGV 240 KGHVRQALSQGGPAAAQRALADLVDRFTPSRVSIELTHHGHPLDDERNAALAGLAPRFGV Sbjct 193 KGHVRQALSQGGPAAAQRALADLVDRFTPSRVSIELTHHGHPLDDERNAALAGLAPRFGV 252 Query 241 GIVATTGAHFADPSRGRLAMAMAAIRARRSLDSAAGWLAPLGGAHLRSGEEMARLFAWCP 300 GIV TTGAHFADPSRGRLAMAMAAIRARRSLDSAAGWLAPLGGAHLRSGEEMARLFAWCP Sbjct 253 GIVTTTGAHFADPSRGRLAMAMAAIRARRSLDSAAGWLAPLGGAHLRSGEEMARLFAWCP 312 Query 301 EAVTAAAELGERCAFGLQLIAPRLPPFDVPDGHTEDSWLRSLVMAGARERYGPPKSAPRA 360 EAVTAAAELGERCAFGLQLIAPRLPPFDVPDGHTEDSWLRSLVMAGARERYGPPKSAPRA Sbjct 313 EAVTAAAELGERCAFGLQLIAPRLPPFDVPDGHTEDSWLRSLVMAGARERYGPPKSAPRA 372 Query 361 YSQIEHELKVIAQLRFPGYFLVVHDITRFCRDNDILCQGRGSAANSAVCYALGVTAVDPV 420 YSQIEHELKVIAQLRFPGYFLVVHDITRFCRDNDILCQGRGSAANSAVCYALGVTAVDPV Sbjct 373 YSQIEHELKVIAQLRFPGYFLVVHDITRFCRDNDILCQGRGSAANSAVCYALGVTAVDPV 432 Query 421 ANELLFERFLSPARDGPPDIDIDIESDQREKVIQYVYHKYGRDYAAQVANVITYRGRSAV 480 ANELLFERFLSPARDGPPDIDIDIESDQREKVIQYVYHKYGRDYAAQVANVITYRGRSAV Sbjct 433 ANELLFERFLSPARDGPPDIDIDIESDQREKVIQYVYHKYGRDYAAQVANVITYRGRSAV 492 Query 481 RDMARALGFSPGQQDAWSKQVSHWTGQADDVDGIPEQVIDLATQIRNLPRHLGIHSGGMV 540 RDMARALGFSPGQQDAWSKQVSHWTGQADDVDGIPEQVIDLATQIRNLPRHLGIHSGGMV Sbjct 493 RDMARALGFSPGQQDAWSKQVSHWTGQADDVDGIPEQVIDLATQIRNLPRHLGIHSGGMV 552 Query 541 ICDRPIADVCPVEWARMANRSVLQWDKDDCAAIGLVKFDLLGLGMLSALHYAKDLVAEHK 600 ICDRPIADVCPVEWARMANRSVLQWDKDDCAAIGLVKFDLLGLGMLSALHYAKDLVAEHK Sbjct 553 ICDRPIADVCPVEWARMANRSVLQWDKDDCAAIGLVKFDLLGLGMLSALHYAKDLVAEHK 612 Query 601 GIEVDLARLDLSEPAVYEMLARADSVGVFQVESRAQMATLPRLKPRVFYDLVVEVALIRP 660 GIEVDLARLDLSEPAVYEMLARADSVGVFQVESRAQMATLPRLKPRVFYDLVVEVALIRP Sbjct 613 GIEVDLARLDLSEPAVYEMLARADSVGVFQVESRAQMATLPRLKPRVFYDLVVEVALIRP 672 Query 661 GPIQGGSVHPYIRRRNGVDPVIYEHPSMAPALRKTLGVPLFQEQLMQLAVDCAGFSAAEA 720 GPIQGGSVHPYIRRRNGVDPVIYEHPSMAPALRKTLGVPLFQEQLMQLAVDCAGFSAAEA Sbjct 673 GPIQGGSVHPYIRRRNGVDPVIYEHPSMAPALRKTLGVPLFQEQLMQLAVDCAGFSAAEA 732 Query 721 DQLRRAMGSKRSTERMRRLRGRFYDGMRALHGAPDEVIDRIYEKLEAFANFGFPESHALS 780 DQLRRAMGSKRSTERMRRLRGRFYDGMRALHGAPDEVIDRIYEKLEAFANFGFPESHALS Sbjct 733 DQLRRAMGSKRSTERMRRLRGRFYDGMRALHGAPDEVIDRIYEKLEAFANFGFPESHALS 792 Query 781 FASLVFYSAWFKLHHPAAFCAALLRAQPMGFYSPQSLVADARRHGVAVHGPCVNASLAHA 840 FASLVFYSAWFKLHHPAAFCAALLRAQPMGFYSPQSLVADARRHGVAVHGPCVNASLAHA Sbjct 793 FASLVFYSAWFKLHHPAAFCAALLRAQPMGFYSPQSLVADARRHGVAVHGPCVNASLAHA 852 Query 841 TCENAGTEVRLGLGAVRYLGAELAEKLVAERTANGPFTSLPDLTSRVQLSVPQVEALATA 900 TCENAGTEVRLGLGAVRYLGAELAEKLVAERTANGPFTSLPDLTSRVQLSVPQVEALATA Sbjct 853 TCENAGTEVRLGLGAVRYLGAELAEKLVAERTANGPFTSLPDLTSRVQLSVPQVEALATA 912 Query 901 GALGCFGMSRREALWAAGAAATGRPDRLPGVGSSSHIPALPGMSELELAAADVWATGVSP 960 GALGCFGMSRREALWAAGAAATGRPDRLPGVGSSSHIPALPGMSELELAAADVWATGVSP Sbjct 913 GALGCFGMSRREALWAAGAAATGRPDRLPGVGSSSHIPALPGMSELELAAADVWATGVSP 972 Query 961 DSYPTQFLRADLDAMGVLPAERLGSVSDGDRVLIAGAVTHRQRPATAQGVTFINLEDETG 1020 DSYPTQFLRADLDAMGVLPAERLGSVSDGDRVLIAGAVTHRQRPATAQGVTFINLEDETG Sbjct 973 DSYPTQFLRADLDAMGVLPAERLGSVSDGDRVLIAGAVTHRQRPATAQGVTFINLEDETG 1032 Query 1021 MVNVLCTPGVWARHRKLAHTAPALLIRGQVQNASGAITVVAERMGRLTLAVGARSRDFR 1079 MVNVLCTPGVWARHRKLAHTAPALLIRGQVQNASGAITVVAERMGRLTLAVGARSRDFR Sbjct 1033 MVNVLCTPGVWARHRKLAHTAPALLIRGQVQNASGAITVVAERMGRLTLAVGARSRDFR 1091 >gi|308373723|ref|ZP_07433455.2| DNA polymerase subunit III alpha dnaE2 [Mycobacterium tuberculosis SUMu005] gi|308336574|gb|EFP25425.1| DNA polymerase subunit III alpha dnaE2 [Mycobacterium tuberculosis SUMu005] Length=1098 Score = 2175 bits (5636), Expect = 0.0, Method: Compositional matrix adjust. Identities = 1078/1079 (99%), Positives = 1078/1079 (99%), Gaps = 0/1079 (0%) Query 1 MERVLNGKPRHAGVPAFDADGDVPRSRKRGAYQPPGRERVGSSVAYAELHAHSAYSFLDG 60 MERVLNGKPRHAGVPAFDADGDVPRSRKRGAYQPPGRERVGSSVAYAELHAHSAYSFLDG Sbjct 20 MERVLNGKPRHAGVPAFDADGDVPRSRKRGAYQPPGRERVGSSVAYAELHAHSAYSFLDG 79 Query 61 ASTPEELVEEAARLGLCALALTDHDGLYGAVRFAEAAAELDVRTVFGAELSLGATARTER 120 ASTPEELVEEAARLGLCALALTDHDGLYGAVRFAEAAAELDVRTVFGAELSLGATARTER Sbjct 80 ASTPEELVEEAARLGLCALALTDHDGLYGAVRFAEAAAELDVRTVFGAELSLGATARTER 139 Query 121 PDPPGPHLLVLARGPEGYRRLSRQLAAAHLAGGEKGKPRYDFDALTEAAGGHWHILTGCR 180 PDPPGPHLLVLARGPEGYRRLSRQLAAAHLAGGEKGKPRYDFDALTEAAGGHWHILTGCR Sbjct 140 PDPPGPHLLVLARGPEGYRRLSRQLAAAHLAGGEKGKPRYDFDALTEAAGGHWHILTGCR 199 Query 181 KGHVRQALSQGGPAAAQRALADLVDRFTPSRVSIELTHHGHPLDDERNAALAGLAPRFGV 240 KGHVRQALSQGGPAAAQRALADLVDRFTPSRVSIELTHHGHPLDDERNAALAGLAPRFGV Sbjct 200 KGHVRQALSQGGPAAAQRALADLVDRFTPSRVSIELTHHGHPLDDERNAALAGLAPRFGV 259 Query 241 GIVATTGAHFADPSRGRLAMAMAAIRARRSLDSAAGWLAPLGGAHLRSGEEMARLFAWCP 300 GIV TTGAHFADPSRGRLAMAMAAIRARRSLDSAAGWLAPLGGAHLRSGEEMARLFAWCP Sbjct 260 GIVTTTGAHFADPSRGRLAMAMAAIRARRSLDSAAGWLAPLGGAHLRSGEEMARLFAWCP 319 Query 301 EAVTAAAELGERCAFGLQLIAPRLPPFDVPDGHTEDSWLRSLVMAGARERYGPPKSAPRA 360 EAVTAAAELGERCAFGLQLIAPRLPPFDVPDGHTEDSWLRSLVMAGARERYGPPKSAPRA Sbjct 320 EAVTAAAELGERCAFGLQLIAPRLPPFDVPDGHTEDSWLRSLVMAGARERYGPPKSAPRA 379 Query 361 YSQIEHELKVIAQLRFPGYFLVVHDITRFCRDNDILCQGRGSAANSAVCYALGVTAVDPV 420 YSQIEHELKVIAQLRFPGYFLVVHDITRFCRDNDILCQGRGSAANSAVCYALGVTAVDPV Sbjct 380 YSQIEHELKVIAQLRFPGYFLVVHDITRFCRDNDILCQGRGSAANSAVCYALGVTAVDPV 439 Query 421 ANELLFERFLSPARDGPPDIDIDIESDQREKVIQYVYHKYGRDYAAQVANVITYRGRSAV 480 ANELLFERFLSPARDGPPDIDIDIESDQREKVIQYVYHKYGRDYAAQVANVITYRGRSAV Sbjct 440 ANELLFERFLSPARDGPPDIDIDIESDQREKVIQYVYHKYGRDYAAQVANVITYRGRSAV 499 Query 481 RDMARALGFSPGQQDAWSKQVSHWTGQADDVDGIPEQVIDLATQIRNLPRHLGIHSGGMV 540 RDMARALGFSPGQQDAWSKQVSHWTGQADDVDGIPEQVIDLATQIRNLPRHLGIHSGGMV Sbjct 500 RDMARALGFSPGQQDAWSKQVSHWTGQADDVDGIPEQVIDLATQIRNLPRHLGIHSGGMV 559 Query 541 ICDRPIADVCPVEWARMANRSVLQWDKDDCAAIGLVKFDLLGLGMLSALHYAKDLVAEHK 600 ICDRPIADVCPVEWARMANRSVLQWDKDDCAAIGLVKFDLLGLGMLSALHYAKDLVAEHK Sbjct 560 ICDRPIADVCPVEWARMANRSVLQWDKDDCAAIGLVKFDLLGLGMLSALHYAKDLVAEHK 619 Query 601 GIEVDLARLDLSEPAVYEMLARADSVGVFQVESRAQMATLPRLKPRVFYDLVVEVALIRP 660 GIEVDLARLDLSEPAVYEMLARADSVGVFQVESRAQMATLPRLKPRVFYDLVVEVALIRP Sbjct 620 GIEVDLARLDLSEPAVYEMLARADSVGVFQVESRAQMATLPRLKPRVFYDLVVEVALIRP 679 Query 661 GPIQGGSVHPYIRRRNGVDPVIYEHPSMAPALRKTLGVPLFQEQLMQLAVDCAGFSAAEA 720 GPIQGGSVHPYIRRRNGVDPVIYEHPSMAPALRKTLGVPLFQEQLMQLAVDCAGFSAAEA Sbjct 680 GPIQGGSVHPYIRRRNGVDPVIYEHPSMAPALRKTLGVPLFQEQLMQLAVDCAGFSAAEA 739 Query 721 DQLRRAMGSKRSTERMRRLRGRFYDGMRALHGAPDEVIDRIYEKLEAFANFGFPESHALS 780 DQLRRAMGSKRSTERMRRLRGRFYDGMRALHGAPDEVIDRIYEKLEAFANFGFPESHALS Sbjct 740 DQLRRAMGSKRSTERMRRLRGRFYDGMRALHGAPDEVIDRIYEKLEAFANFGFPESHALS 799 Query 781 FASLVFYSAWFKLHHPAAFCAALLRAQPMGFYSPQSLVADARRHGVAVHGPCVNASLAHA 840 FASLVFYSAWFKLHHPAAFCAALLRAQPMGFYSPQSLVADARRHGVAVHGPCVNASLAHA Sbjct 800 FASLVFYSAWFKLHHPAAFCAALLRAQPMGFYSPQSLVADARRHGVAVHGPCVNASLAHA 859 Query 841 TCENAGTEVRLGLGAVRYLGAELAEKLVAERTANGPFTSLPDLTSRVQLSVPQVEALATA 900 TCENAGTEVRLGLGAVRYLGAELAEKLVAERTANGPFTSLPDLTSRVQLSVPQVEALATA Sbjct 860 TCENAGTEVRLGLGAVRYLGAELAEKLVAERTANGPFTSLPDLTSRVQLSVPQVEALATA 919 Query 901 GALGCFGMSRREALWAAGAAATGRPDRLPGVGSSSHIPALPGMSELELAAADVWATGVSP 960 GALGCFGMSRREALWAAGAAATGRPDRLPGVGSSSHIPALPGMSELELAAADVWATGVSP Sbjct 920 GALGCFGMSRREALWAAGAAATGRPDRLPGVGSSSHIPALPGMSELELAAADVWATGVSP 979 Query 961 DSYPTQFLRADLDAMGVLPAERLGSVSDGDRVLIAGAVTHRQRPATAQGVTFINLEDETG 1020 DSYPTQFLRADLDAMGVLPAERLGSVSDGDRVLIAGAVTHRQRPATAQGVTFINLEDETG Sbjct 980 DSYPTQFLRADLDAMGVLPAERLGSVSDGDRVLIAGAVTHRQRPATAQGVTFINLEDETG 1039 Query 1021 MVNVLCTPGVWARHRKLAHTAPALLIRGQVQNASGAITVVAERMGRLTLAVGARSRDFR 1079 MVNVLCTPGVWARHRKLAHTAPALLIRGQVQNASGAITVVAERMGRLTLAVGARSRDFR Sbjct 1040 MVNVLCTPGVWARHRKLAHTAPALLIRGQVQNASGAITVVAERMGRLTLAVGARSRDFR 1098 >gi|254233973|ref|ZP_04927298.1| DNA polymerase III (alpha chain) dnaE2 (DNA nucleotidyltransferase) [Mycobacterium tuberculosis C] gi|124599502|gb|EAY58606.1| DNA polymerase III (alpha chain) dnaE2 (DNA nucleotidyltransferase) [Mycobacterium tuberculosis C] Length=1079 Score = 2153 bits (5579), Expect = 0.0, Method: Compositional matrix adjust. Identities = 1068/1079 (99%), Positives = 1069/1079 (99%), Gaps = 0/1079 (0%) Query 1 MERVLNGKPRHAGVPAFDADGDVPRSRKRGAYQPPGRERVGSSVAYAELHAHSAYSFLDG 60 MERVLNGKPRHAGVPAFDADGDVPRSRKRGAYQPPGRERVGSSVAYAELHAHSAYSFLDG Sbjct 1 MERVLNGKPRHAGVPAFDADGDVPRSRKRGAYQPPGRERVGSSVAYAELHAHSAYSFLDG 60 Query 61 ASTPEELVEEAARLGLCALALTDHDGLYGAVRFAEAAAELDVRTVFGAELSLGATARTER 120 ASTPEELVEEAARLGLCALALTDHDGLYGAVRFAEAAAELDVRTVFGAELSLGATARTER Sbjct 61 ASTPEELVEEAARLGLCALALTDHDGLYGAVRFAEAAAELDVRTVFGAELSLGATARTER 120 Query 121 PDPPGPHLLVLARGPEGYRRLSRQLAAAHLAGGEKGKPRYDFDALTEAAGGHWHILTGCR 180 PDPPGPHLLVLARGPEGYRRLSRQLAAAHLAGGEKGKPRYDFDALTEAAGGHWHILTGCR Sbjct 121 PDPPGPHLLVLARGPEGYRRLSRQLAAAHLAGGEKGKPRYDFDALTEAAGGHWHILTGCR 180 Query 181 KGHVRQALSQGGPAAAQRALADLVDRFTPSRVSIELTHHGHPLDDERNAALAGLAPRFGV 240 KGHV QAL Q GP A AL DLVD FTPS VSIELTHHGHPLDDERNAALAGLAPRFGV Sbjct 181 KGHVAQALPQSGPTADAAALPDLVDPFTPSAVSIELTHHGHPLDDERNAALAGLAPRFGV 240 Query 241 GIVATTGAHFADPSRGRLAMAMAAIRARRSLDSAAGWLAPLGGAHLRSGEEMARLFAWCP 300 GIVATTGAHFADPSRGRLAMAMAAIRARRSLDSAAGWLAPLGGAH+RSGEEMARLFAWCP Sbjct 241 GIVATTGAHFADPSRGRLAMAMAAIRARRSLDSAAGWLAPLGGAHVRSGEEMARLFAWCP 300 Query 301 EAVTAAAELGERCAFGLQLIAPRLPPFDVPDGHTEDSWLRSLVMAGARERYGPPKSAPRA 360 EAVTAAAELGERCAFGLQLIAPRLPPFDVPDGHTEDSWLRSLVMAGARERYGPPKSAPRA Sbjct 301 EAVTAAAELGERCAFGLQLIAPRLPPFDVPDGHTEDSWLRSLVMAGARERYGPPKSAPRA 360 Query 361 YSQIEHELKVIAQLRFPGYFLVVHDITRFCRDNDILCQGRGSAANSAVCYALGVTAVDPV 420 YSQIEHELKVIAQLRFPGYFLVVHDITRFCRDNDILCQGRGSAANSAVCYALGVTAVDPV Sbjct 361 YSQIEHELKVIAQLRFPGYFLVVHDITRFCRDNDILCQGRGSAANSAVCYALGVTAVDPV 420 Query 421 ANELLFERFLSPARDGPPDIDIDIESDQREKVIQYVYHKYGRDYAAQVANVITYRGRSAV 480 ANELLFERFLSPARDGPPDIDIDIESDQREKVIQYVYHKYGRDYAAQVANVITYRGRSAV Sbjct 421 ANELLFERFLSPARDGPPDIDIDIESDQREKVIQYVYHKYGRDYAAQVANVITYRGRSAV 480 Query 481 RDMARALGFSPGQQDAWSKQVSHWTGQADDVDGIPEQVIDLATQIRNLPRHLGIHSGGMV 540 RDMARALGFSPGQQDAWSKQVSHWTGQADDVDGIPEQVIDLATQIRNLPRHLGIHSGGMV Sbjct 481 RDMARALGFSPGQQDAWSKQVSHWTGQADDVDGIPEQVIDLATQIRNLPRHLGIHSGGMV 540 Query 541 ICDRPIADVCPVEWARMANRSVLQWDKDDCAAIGLVKFDLLGLGMLSALHYAKDLVAEHK 600 ICDRPIADVCPVEWARMANRSVLQWDKDDCAAIGLVKFDLLGLGMLSALHYAKDLVAEHK Sbjct 541 ICDRPIADVCPVEWARMANRSVLQWDKDDCAAIGLVKFDLLGLGMLSALHYAKDLVAEHK 600 Query 601 GIEVDLARLDLSEPAVYEMLARADSVGVFQVESRAQMATLPRLKPRVFYDLVVEVALIRP 660 GIEVDLARLDLSEPAVYEMLARADSVGVFQVESRAQMATLPRLKPRVFYDLVVEVALIRP Sbjct 601 GIEVDLARLDLSEPAVYEMLARADSVGVFQVESRAQMATLPRLKPRVFYDLVVEVALIRP 660 Query 661 GPIQGGSVHPYIRRRNGVDPVIYEHPSMAPALRKTLGVPLFQEQLMQLAVDCAGFSAAEA 720 GPIQGGSVHPYIRRRNGVDPVIYEHPSMAPALRKTLGVPLFQEQLMQLAVDCAGFSAAEA Sbjct 661 GPIQGGSVHPYIRRRNGVDPVIYEHPSMAPALRKTLGVPLFQEQLMQLAVDCAGFSAAEA 720 Query 721 DQLRRAMGSKRSTERMRRLRGRFYDGMRALHGAPDEVIDRIYEKLEAFANFGFPESHALS 780 DQLRRAMGSKRSTERMRRLRGRFYDGMRALHGAPDEVIDRIYEKLEAFANFGFPESHALS Sbjct 721 DQLRRAMGSKRSTERMRRLRGRFYDGMRALHGAPDEVIDRIYEKLEAFANFGFPESHALS 780 Query 781 FASLVFYSAWFKLHHPAAFCAALLRAQPMGFYSPQSLVADARRHGVAVHGPCVNASLAHA 840 FASLVFYSAWFKLHHPAAFCAALLRAQPMGFYSPQSLVADARRHGVAVHGPCVNASLAHA Sbjct 781 FASLVFYSAWFKLHHPAAFCAALLRAQPMGFYSPQSLVADARRHGVAVHGPCVNASLAHA 840 Query 841 TCENAGTEVRLGLGAVRYLGAELAEKLVAERTANGPFTSLPDLTSRVQLSVPQVEALATA 900 TCENAGTEVRLGLGAVRYLGAELAEKLVAERTANGPFTSLPDLTSRVQLSVPQVEALATA Sbjct 841 TCENAGTEVRLGLGAVRYLGAELAEKLVAERTANGPFTSLPDLTSRVQLSVPQVEALATA 900 Query 901 GALGCFGMSRREALWAAGAAATGRPDRLPGVGSSSHIPALPGMSELELAAADVWATGVSP 960 GALGCFGMSRREALWAAGAAATGRPDRLPGVGSSSHIPALPGMSELELAAADVWATGVSP Sbjct 901 GALGCFGMSRREALWAAGAAATGRPDRLPGVGSSSHIPALPGMSELELAAADVWATGVSP 960 Query 961 DSYPTQFLRADLDAMGVLPAERLGSVSDGDRVLIAGAVTHRQRPATAQGVTFINLEDETG 1020 DSYPTQFLRADLDAMGVLPAERLGSVSDGDRVLIAGAVTHRQRPATAQGVTFINLEDETG Sbjct 961 DSYPTQFLRADLDAMGVLPAERLGSVSDGDRVLIAGAVTHRQRPATAQGVTFINLEDETG 1020 Query 1021 MVNVLCTPGVWARHRKLAHTAPALLIRGQVQNASGAITVVAERMGRLTLAVGARSRDFR 1079 MVNVLCTPGVWARHRKLAHTAPALLIRGQVQNASGAITVVAERMGRLTLAVGARSRDFR Sbjct 1021 MVNVLCTPGVWARHRKLAHTAPALLIRGQVQNASGAITVVAERMGRLTLAVGARSRDFR 1079 >gi|339296196|gb|AEJ48307.1| error-prone DNA polymerase [Mycobacterium tuberculosis CCDC5079] Length=1003 Score = 2023 bits (5240), Expect = 0.0, Method: Compositional matrix adjust. Identities = 1002/1004 (99%), Positives = 1003/1004 (99%), Gaps = 1/1004 (0%) Query 76 LCALALTDHDGLYGAVRFAEAAAELDVRTVFGAELSLGATARTERPDPPGPHLLVLARGP 135 +C LALTDHDGLYGAVRFAEAAAELDVRTVFGAELSLGATARTERPDPPGPHLLVLARGP Sbjct 1 MC-LALTDHDGLYGAVRFAEAAAELDVRTVFGAELSLGATARTERPDPPGPHLLVLARGP 59 Query 136 EGYRRLSRQLAAAHLAGGEKGKPRYDFDALTEAAGGHWHILTGCRKGHVRQALSQGGPAA 195 EGYRRLSRQLAAAHLAGGEKGKPRYDFDALTEAAGGHWHILTGCRKGHVRQALSQGGPAA Sbjct 60 EGYRRLSRQLAAAHLAGGEKGKPRYDFDALTEAAGGHWHILTGCRKGHVRQALSQGGPAA 119 Query 196 AQRALADLVDRFTPSRVSIELTHHGHPLDDERNAALAGLAPRFGVGIVATTGAHFADPSR 255 AQRALADLVDRFTPSRVSIELTHHGHPLDDERNAALAGLAPRFGVGIVATTGAHFADPSR Sbjct 120 AQRALADLVDRFTPSRVSIELTHHGHPLDDERNAALAGLAPRFGVGIVATTGAHFADPSR 179 Query 256 GRLAMAMAAIRARRSLDSAAGWLAPLGGAHLRSGEEMARLFAWCPEAVTAAAELGERCAF 315 GRLAMAMAAIRARRSLDSAAGWLAPLGGAHLRSGEEMARLFAWCPEAVTAAAELGERCAF Sbjct 180 GRLAMAMAAIRARRSLDSAAGWLAPLGGAHLRSGEEMARLFAWCPEAVTAAAELGERCAF 239 Query 316 GLQLIAPRLPPFDVPDGHTEDSWLRSLVMAGARERYGPPKSAPRAYSQIEHELKVIAQLR 375 GLQLIAPRLPPFDVPDGHTEDSWLRSLVMAGARERYGPPKSAPRAYSQIEHELKVIAQLR Sbjct 240 GLQLIAPRLPPFDVPDGHTEDSWLRSLVMAGARERYGPPKSAPRAYSQIEHELKVIAQLR 299 Query 376 FPGYFLVVHDITRFCRDNDILCQGRGSAANSAVCYALGVTAVDPVANELLFERFLSPARD 435 FPGYFLVVHDITRFCRDNDILCQGRGSAANSAVCYALGVTAVDPVANELLFERFLSPARD Sbjct 300 FPGYFLVVHDITRFCRDNDILCQGRGSAANSAVCYALGVTAVDPVANELLFERFLSPARD 359 Query 436 GPPDIDIDIESDQREKVIQYVYHKYGRDYAAQVANVITYRGRSAVRDMARALGFSPGQQD 495 GPPDIDIDIESDQREKVIQYVYHKYGRDYAAQVANVITYRGRSAVRDMARALGFSPGQQD Sbjct 360 GPPDIDIDIESDQREKVIQYVYHKYGRDYAAQVANVITYRGRSAVRDMARALGFSPGQQD 419 Query 496 AWSKQVSHWTGQADDVDGIPEQVIDLATQIRNLPRHLGIHSGGMVICDRPIADVCPVEWA 555 AWSKQVSHWTGQADDVDGIPEQVIDLATQIRNLPRHLGIHSGGMVICDRPIADVCPVEWA Sbjct 420 AWSKQVSHWTGQADDVDGIPEQVIDLATQIRNLPRHLGIHSGGMVICDRPIADVCPVEWA 479 Query 556 RMANRSVLQWDKDDCAAIGLVKFDLLGLGMLSALHYAKDLVAEHKGIEVDLARLDLSEPA 615 RMANRSVLQWDKDDCAAIGLVKFDLLGLGMLSALHYAKDLVAEHKGIEVDLARLDLSEPA Sbjct 480 RMANRSVLQWDKDDCAAIGLVKFDLLGLGMLSALHYAKDLVAEHKGIEVDLARLDLSEPA 539 Query 616 VYEMLARADSVGVFQVESRAQMATLPRLKPRVFYDLVVEVALIRPGPIQGGSVHPYIRRR 675 VYEMLARADSVGVFQVESRAQMATLPRLKPRVFYDLVVEVALIRPGPIQGGSVHPYIRRR Sbjct 540 VYEMLARADSVGVFQVESRAQMATLPRLKPRVFYDLVVEVALIRPGPIQGGSVHPYIRRR 599 Query 676 NGVDPVIYEHPSMAPALRKTLGVPLFQEQLMQLAVDCAGFSAAEADQLRRAMGSKRSTER 735 NGVDPVIYEHPSMAPALRKTLGVPLFQEQLMQLAVDCAGFSAAEADQLRRAMGSKRSTER Sbjct 600 NGVDPVIYEHPSMAPALRKTLGVPLFQEQLMQLAVDCAGFSAAEADQLRRAMGSKRSTER 659 Query 736 MRRLRGRFYDGMRALHGAPDEVIDRIYEKLEAFANFGFPESHALSFASLVFYSAWFKLHH 795 MRRLRGRFYDGMRALHGAPDEVIDRIYEKLEAFANFGFPESHALSFASLVFYSAWFKLHH Sbjct 660 MRRLRGRFYDGMRALHGAPDEVIDRIYEKLEAFANFGFPESHALSFASLVFYSAWFKLHH 719 Query 796 PAAFCAALLRAQPMGFYSPQSLVADARRHGVAVHGPCVNASLAHATCENAGTEVRLGLGA 855 PAAFCAALLRAQPMGFYSPQSLVADARRHGVAVHGPCVNASLAHATCENAGTEVRLGLGA Sbjct 720 PAAFCAALLRAQPMGFYSPQSLVADARRHGVAVHGPCVNASLAHATCENAGTEVRLGLGA 779 Query 856 VRYLGAELAEKLVAERTANGPFTSLPDLTSRVQLSVPQVEALATAGALGCFGMSRREALW 915 VRYLGAELAEKLVAERTANGPFTSLPDLTSRVQLSVPQVEALATAGALGCFGMSRREALW Sbjct 780 VRYLGAELAEKLVAERTANGPFTSLPDLTSRVQLSVPQVEALATAGALGCFGMSRREALW 839 Query 916 AAGAAATGRPDRLPGVGSSSHIPALPGMSELELAAADVWATGVSPDSYPTQFLRADLDAM 975 AAGAAATGRPDRLPGVGSSSHIPALPGMSELELAAADVWATGVSPDSYPTQFLRADLDAM Sbjct 840 AAGAAATGRPDRLPGVGSSSHIPALPGMSELELAAADVWATGVSPDSYPTQFLRADLDAM 899 Query 976 GVLPAERLGSVSDGDRVLIAGAVTHRQRPATAQGVTFINLEDETGMVNVLCTPGVWARHR 1035 GVLPAERLGSVSDGDRVLIAGAVTHRQRPATAQGVTFINLEDETGMVNVLCTPGVWARHR Sbjct 900 GVLPAERLGSVSDGDRVLIAGAVTHRQRPATAQGVTFINLEDETGMVNVLCTPGVWARHR 959 Query 1036 KLAHTAPALLIRGQVQNASGAITVVAERMGRLTLAVGARSRDFR 1079 KLAHTAPALLIRGQVQNASGAITVVAERMGRLTLAVGARSRDFR Sbjct 960 KLAHTAPALLIRGQVQNASGAITVVAERMGRLTLAVGARSRDFR 1003 >gi|289755502|ref|ZP_06514880.1| DNA polymerase III, alpha subunit [Mycobacterium tuberculosis EAS054] gi|289696089|gb|EFD63518.1| DNA polymerase III, alpha subunit [Mycobacterium tuberculosis EAS054] Length=1005 Score = 1953 bits (5060), Expect = 0.0, Method: Compositional matrix adjust. Identities = 969/969 (100%), Positives = 969/969 (100%), Gaps = 0/969 (0%) Query 1 MERVLNGKPRHAGVPAFDADGDVPRSRKRGAYQPPGRERVGSSVAYAELHAHSAYSFLDG 60 MERVLNGKPRHAGVPAFDADGDVPRSRKRGAYQPPGRERVGSSVAYAELHAHSAYSFLDG Sbjct 13 MERVLNGKPRHAGVPAFDADGDVPRSRKRGAYQPPGRERVGSSVAYAELHAHSAYSFLDG 72 Query 61 ASTPEELVEEAARLGLCALALTDHDGLYGAVRFAEAAAELDVRTVFGAELSLGATARTER 120 ASTPEELVEEAARLGLCALALTDHDGLYGAVRFAEAAAELDVRTVFGAELSLGATARTER Sbjct 73 ASTPEELVEEAARLGLCALALTDHDGLYGAVRFAEAAAELDVRTVFGAELSLGATARTER 132 Query 121 PDPPGPHLLVLARGPEGYRRLSRQLAAAHLAGGEKGKPRYDFDALTEAAGGHWHILTGCR 180 PDPPGPHLLVLARGPEGYRRLSRQLAAAHLAGGEKGKPRYDFDALTEAAGGHWHILTGCR Sbjct 133 PDPPGPHLLVLARGPEGYRRLSRQLAAAHLAGGEKGKPRYDFDALTEAAGGHWHILTGCR 192 Query 181 KGHVRQALSQGGPAAAQRALADLVDRFTPSRVSIELTHHGHPLDDERNAALAGLAPRFGV 240 KGHVRQALSQGGPAAAQRALADLVDRFTPSRVSIELTHHGHPLDDERNAALAGLAPRFGV Sbjct 193 KGHVRQALSQGGPAAAQRALADLVDRFTPSRVSIELTHHGHPLDDERNAALAGLAPRFGV 252 Query 241 GIVATTGAHFADPSRGRLAMAMAAIRARRSLDSAAGWLAPLGGAHLRSGEEMARLFAWCP 300 GIVATTGAHFADPSRGRLAMAMAAIRARRSLDSAAGWLAPLGGAHLRSGEEMARLFAWCP Sbjct 253 GIVATTGAHFADPSRGRLAMAMAAIRARRSLDSAAGWLAPLGGAHLRSGEEMARLFAWCP 312 Query 301 EAVTAAAELGERCAFGLQLIAPRLPPFDVPDGHTEDSWLRSLVMAGARERYGPPKSAPRA 360 EAVTAAAELGERCAFGLQLIAPRLPPFDVPDGHTEDSWLRSLVMAGARERYGPPKSAPRA Sbjct 313 EAVTAAAELGERCAFGLQLIAPRLPPFDVPDGHTEDSWLRSLVMAGARERYGPPKSAPRA 372 Query 361 YSQIEHELKVIAQLRFPGYFLVVHDITRFCRDNDILCQGRGSAANSAVCYALGVTAVDPV 420 YSQIEHELKVIAQLRFPGYFLVVHDITRFCRDNDILCQGRGSAANSAVCYALGVTAVDPV Sbjct 373 YSQIEHELKVIAQLRFPGYFLVVHDITRFCRDNDILCQGRGSAANSAVCYALGVTAVDPV 432 Query 421 ANELLFERFLSPARDGPPDIDIDIESDQREKVIQYVYHKYGRDYAAQVANVITYRGRSAV 480 ANELLFERFLSPARDGPPDIDIDIESDQREKVIQYVYHKYGRDYAAQVANVITYRGRSAV Sbjct 433 ANELLFERFLSPARDGPPDIDIDIESDQREKVIQYVYHKYGRDYAAQVANVITYRGRSAV 492 Query 481 RDMARALGFSPGQQDAWSKQVSHWTGQADDVDGIPEQVIDLATQIRNLPRHLGIHSGGMV 540 RDMARALGFSPGQQDAWSKQVSHWTGQADDVDGIPEQVIDLATQIRNLPRHLGIHSGGMV Sbjct 493 RDMARALGFSPGQQDAWSKQVSHWTGQADDVDGIPEQVIDLATQIRNLPRHLGIHSGGMV 552 Query 541 ICDRPIADVCPVEWARMANRSVLQWDKDDCAAIGLVKFDLLGLGMLSALHYAKDLVAEHK 600 ICDRPIADVCPVEWARMANRSVLQWDKDDCAAIGLVKFDLLGLGMLSALHYAKDLVAEHK Sbjct 553 ICDRPIADVCPVEWARMANRSVLQWDKDDCAAIGLVKFDLLGLGMLSALHYAKDLVAEHK 612 Query 601 GIEVDLARLDLSEPAVYEMLARADSVGVFQVESRAQMATLPRLKPRVFYDLVVEVALIRP 660 GIEVDLARLDLSEPAVYEMLARADSVGVFQVESRAQMATLPRLKPRVFYDLVVEVALIRP Sbjct 613 GIEVDLARLDLSEPAVYEMLARADSVGVFQVESRAQMATLPRLKPRVFYDLVVEVALIRP 672 Query 661 GPIQGGSVHPYIRRRNGVDPVIYEHPSMAPALRKTLGVPLFQEQLMQLAVDCAGFSAAEA 720 GPIQGGSVHPYIRRRNGVDPVIYEHPSMAPALRKTLGVPLFQEQLMQLAVDCAGFSAAEA Sbjct 673 GPIQGGSVHPYIRRRNGVDPVIYEHPSMAPALRKTLGVPLFQEQLMQLAVDCAGFSAAEA 732 Query 721 DQLRRAMGSKRSTERMRRLRGRFYDGMRALHGAPDEVIDRIYEKLEAFANFGFPESHALS 780 DQLRRAMGSKRSTERMRRLRGRFYDGMRALHGAPDEVIDRIYEKLEAFANFGFPESHALS Sbjct 733 DQLRRAMGSKRSTERMRRLRGRFYDGMRALHGAPDEVIDRIYEKLEAFANFGFPESHALS 792 Query 781 FASLVFYSAWFKLHHPAAFCAALLRAQPMGFYSPQSLVADARRHGVAVHGPCVNASLAHA 840 FASLVFYSAWFKLHHPAAFCAALLRAQPMGFYSPQSLVADARRHGVAVHGPCVNASLAHA Sbjct 793 FASLVFYSAWFKLHHPAAFCAALLRAQPMGFYSPQSLVADARRHGVAVHGPCVNASLAHA 852 Query 841 TCENAGTEVRLGLGAVRYLGAELAEKLVAERTANGPFTSLPDLTSRVQLSVPQVEALATA 900 TCENAGTEVRLGLGAVRYLGAELAEKLVAERTANGPFTSLPDLTSRVQLSVPQVEALATA Sbjct 853 TCENAGTEVRLGLGAVRYLGAELAEKLVAERTANGPFTSLPDLTSRVQLSVPQVEALATA 912 Query 901 GALGCFGMSRREALWAAGAAATGRPDRLPGVGSSSHIPALPGMSELELAAADVWATGVSP 960 GALGCFGMSRREALWAAGAAATGRPDRLPGVGSSSHIPALPGMSELELAAADVWATGVSP Sbjct 913 GALGCFGMSRREALWAAGAAATGRPDRLPGVGSSSHIPALPGMSELELAAADVWATGVSP 972 Query 961 DSYPTQFLR 969 DSYPTQFLR Sbjct 973 DSYPTQFLR 981 >gi|240173286|ref|ZP_04751944.1| error-prone DNA polymerase [Mycobacterium kansasii ATCC 12478] Length=1100 Score = 1950 bits (5052), Expect = 0.0, Method: Compositional matrix adjust. Identities = 977/1088 (90%), Positives = 1021/1088 (94%), Gaps = 9/1088 (0%) Query 1 MERVLNGKPRHAGVP-----AFDADGDVPRSRKRGAYQPPGRERVGSSVAYAELHAHSAY 55 MERVL+GKPRHAG P A DA + P SR+RG YQPP RV SS AYAELHAH+AY Sbjct 13 MERVLDGKPRHAGAPVAAEPADDAGLEGPWSRQRGTYQPPENARVRSSAAYAELHAHTAY 72 Query 56 SFLDGASTPEELVEEAARLGLCALALTDHDGLYGAVRFAEAAAELDVRTVFGAELSLGAT 115 SFLDGASTPEELVEEAARL LCALALTDH+GLYGAVRFAEAAAELD+RTVFGAELSLG+ Sbjct 73 SFLDGASTPEELVEEAARLDLCALALTDHNGLYGAVRFAEAAAELDMRTVFGAELSLGSE 132 Query 116 ARTERPDPPGPHLLVLARGPEGYRRLSRQLAAAHLAGGEKGKPRYDFDALTEAAGGHWHI 175 ARTE+PDPPGPHLLVLARGPEGYRRLSRQLAAAHLAGGEKGKPRYDFDALTEAAGGHWHI Sbjct 133 ARTEQPDPPGPHLLVLARGPEGYRRLSRQLAAAHLAGGEKGKPRYDFDALTEAAGGHWHI 192 Query 176 LTGCRKGHVRQALSQGGPAAAQRALADLVDRFTPSRVSIELTHHGHPLDDERNAALAGLA 235 LTGCRKGHVRQALS+GGP AAQRALADLVDRF RVSIELTHHGHPLDDERNA LAGLA Sbjct 193 LTGCRKGHVRQALSEGGPDAAQRALADLVDRFGAYRVSIELTHHGHPLDDERNATLAGLA 252 Query 236 PRFGVGIVATTGAHFADPSRGRLAMAMAAIRARRSLDSAAGWLAPLGGAHLRSGEEMARL 295 PRFGVG+VATTGAHFA PSR RLAMAM AIRAR+SLDSAAGWLAPLGG+HLRSG+EMAR+ Sbjct 253 PRFGVGVVATTGAHFAHPSRSRLAMAMGAIRARQSLDSAAGWLAPLGGSHLRSGDEMARM 312 Query 296 FAWCPEAVTAAAELGERCAFGLQLIAPRLPPFDVPDGHTEDSWLRSLVMAGARERYGPPK 355 FAW PEAVTAAAELG +CAF L LIAP+LPPFDVP GHTEDSWLR LVMAGAR RYGPP Sbjct 313 FAWRPEAVTAAAELGGQCAFELALIAPQLPPFDVPGGHTEDSWLRQLVMAGARHRYGPPD 372 Query 356 SAPRAYSQIEHELKVIAQLRFPGYFLVVHDITRFCRDNDILCQGRGSAANSAVCYALGVT 415 APRAY+QI HELKVIAQL+FPGYFLVVHDIT+FCR N+ILCQGRGSAANSAVCYALG+T Sbjct 373 GAPRAYAQIGHELKVIAQLKFPGYFLVVHDITQFCRRNNILCQGRGSAANSAVCYALGIT 432 Query 416 AVDPVANELLFERFLSPARDGPPDIDIDIESDQREKVIQYVYHKYGRDYAAQVANVITYR 475 AVDPVANELLFERFLSPARDGPPDIDIDIESD+REKVIQYVY KYGRDYAAQVANVITYR Sbjct 433 AVDPVANELLFERFLSPARDGPPDIDIDIESDRREKVIQYVYDKYGRDYAAQVANVITYR 492 Query 476 GRSAVRDMARALGFSPGQQDAWSKQVSHWTGQADDVDGIPEQVIDLATQIRNLPRHLGIH 535 GRSAVRDMARALGFS GQQDAWSKQ+SHW GQA +VDGIPEQV+DLATQIRNLPRH+GIH Sbjct 493 GRSAVRDMARALGFSQGQQDAWSKQISHWNGQAAEVDGIPEQVVDLATQIRNLPRHMGIH 552 Query 536 SGGMVICDRPIADVCPVEWARMANRSVLQWDKDDCAAIGLVKFDLLGLGMLSALHYAKDL 595 SGGMVICDRPIADVCPVEWARM NRSVLQWDKDDCAAIGLVKFDLLGLGMLSALHYA DL Sbjct 553 SGGMVICDRPIADVCPVEWARMENRSVLQWDKDDCAAIGLVKFDLLGLGMLSALHYAMDL 612 Query 596 VAEHKGIEVDLARLDLSEPAVYEMLARADSVGVFQVESRAQMATLPRLKPRVFYDLVVEV 655 VAEHKG+EVDLA+LDLSEPAVYEMLARADSVGVFQVESRAQMATLPRL+PRVFYDLVVEV Sbjct 613 VAEHKGLEVDLAKLDLSEPAVYEMLARADSVGVFQVESRAQMATLPRLRPRVFYDLVVEV 672 Query 656 ALIRPGPIQGGSVHPYIRRRNGVDPVIYEHPSMAPALRKTLGVPLFQEQLMQLAVDCAGF 715 ALIRPGPIQGGSVHPYIRRRNG+DPV+YEHPSMAPALRKTLGVPLFQEQLMQLAVDCAGF Sbjct 673 ALIRPGPIQGGSVHPYIRRRNGIDPVVYEHPSMAPALRKTLGVPLFQEQLMQLAVDCAGF 732 Query 716 SAAEADQLRRAMGSKRSTERMRRLRGRFYDGMRALHGAPDEVIDRIYEKLEAFANFGFPE 775 +AAEADQLRRAMGSKRSTERM+RLRGRFYDGMRALHG DEVIDRIYEKLEAFANFGFPE Sbjct 733 TAAEADQLRRAMGSKRSTERMQRLRGRFYDGMRALHGTRDEVIDRIYEKLEAFANFGFPE 792 Query 776 SHALSFASLVFYSAWFKLHHPAAFCAALLRAQPMGFYSPQSLVADARRHGVAVHGPCVNA 835 SHALSFASLVFYSAWFKLHHPAAFCAALLRAQPMGFYSPQSLVADARRHGV VHGP VNA Sbjct 793 SHALSFASLVFYSAWFKLHHPAAFCAALLRAQPMGFYSPQSLVADARRHGVVVHGPDVNA 852 Query 836 SLAHATCENAGTEVRLGLGAVRYLGAELAEKLVAERTANGPFTSLPDLTSRVQLSVPQVE 895 SLAHAT ENAG EVRLGLGAVR++G +LAEKLV ER ANGPF SL DL SRVQLSVPQ E Sbjct 853 SLAHATLENAGMEVRLGLGAVRHIGDDLAEKLVGERNANGPFASLLDLASRVQLSVPQTE 912 Query 896 ALATAGALGCFGMSRREALWAAGAAATGRPDRLPGVGSS----SHIPALPGMSELELAAA 951 ALATAGALGCFGMSRREALWAAGAAAT RPDRLPGVG+ SHIP LPGMSELELAAA Sbjct 913 ALATAGALGCFGMSRREALWAAGAAATQRPDRLPGVGAQGADGSHIPVLPGMSELELAAA 972 Query 952 DVWATGVSPDSYPTQFLRADLDAMGVLPAERLGSVSDGDRVLIAGAVTHRQRPATAQGVT 1011 DVWATG+SPDSYPTQFLRADLDAMGVLPA+ LGSV DGDRVLIAGAVTHRQRP TAQGVT Sbjct 973 DVWATGISPDSYPTQFLRADLDAMGVLPADALGSVPDGDRVLIAGAVTHRQRPGTAQGVT 1032 Query 1012 FINLEDETGMVNVLCTPGVWARHRKLAHTAPALLIRGQVQNASGAITVVAERMGRLTLAV 1071 FINLEDETGMVNVLCTPGVWARHRKLA+TAPALLIRGQVQNASGAITVVAER+GR++LAV Sbjct 1033 FINLEDETGMVNVLCTPGVWARHRKLANTAPALLIRGQVQNASGAITVVAERLGRISLAV 1092 Query 1072 GARSRDFR 1079 G+RSRDFR Sbjct 1093 GSRSRDFR 1100 >gi|167966837|ref|ZP_02549114.1| error-prone DNA polymerase [Mycobacterium tuberculosis H37Ra] Length=955 Score = 1929 bits (4998), Expect = 0.0, Method: Compositional matrix adjust. Identities = 954/955 (99%), Positives = 954/955 (99%), Gaps = 0/955 (0%) Query 1 MERVLNGKPRHAGVPAFDADGDVPRSRKRGAYQPPGRERVGSSVAYAELHAHSAYSFLDG 60 MERVLNGKPRHAGVPAFDADGDVPRSRKRGAYQPPGRERVGSSVAYAELHAHSAYSFLDG Sbjct 1 MERVLNGKPRHAGVPAFDADGDVPRSRKRGAYQPPGRERVGSSVAYAELHAHSAYSFLDG 60 Query 61 ASTPEELVEEAARLGLCALALTDHDGLYGAVRFAEAAAELDVRTVFGAELSLGATARTER 120 ASTPEELVEEAARLGLCALALTDHDGLYGAVRFAEAAAELDVRTVFGAELSLGATARTER Sbjct 61 ASTPEELVEEAARLGLCALALTDHDGLYGAVRFAEAAAELDVRTVFGAELSLGATARTER 120 Query 121 PDPPGPHLLVLARGPEGYRRLSRQLAAAHLAGGEKGKPRYDFDALTEAAGGHWHILTGCR 180 PDPPGPHLLVLARGPEGYRRLSRQLAAAHLAGGEKGKPRYDFDALTEAAGGHWHILTGCR Sbjct 121 PDPPGPHLLVLARGPEGYRRLSRQLAAAHLAGGEKGKPRYDFDALTEAAGGHWHILTGCR 180 Query 181 KGHVRQALSQGGPAAAQRALADLVDRFTPSRVSIELTHHGHPLDDERNAALAGLAPRFGV 240 KGHVRQALSQGGPAAAQRALADLVDRFTPSRVSIELTHHGHPLDDERNAALAGLAPRFGV Sbjct 181 KGHVRQALSQGGPAAAQRALADLVDRFTPSRVSIELTHHGHPLDDERNAALAGLAPRFGV 240 Query 241 GIVATTGAHFADPSRGRLAMAMAAIRARRSLDSAAGWLAPLGGAHLRSGEEMARLFAWCP 300 GIVATTGAHFADPSRGRLAMAMAAIRARRSLDSAAGWLAPLGGAHLRSGEEMARLFAWCP Sbjct 241 GIVATTGAHFADPSRGRLAMAMAAIRARRSLDSAAGWLAPLGGAHLRSGEEMARLFAWCP 300 Query 301 EAVTAAAELGERCAFGLQLIAPRLPPFDVPDGHTEDSWLRSLVMAGARERYGPPKSAPRA 360 EAVTAAAELGERCAFGLQLIAPRLPPFDVPDGHTEDSWLRSLVMAGARERYGPPKSAPRA Sbjct 301 EAVTAAAELGERCAFGLQLIAPRLPPFDVPDGHTEDSWLRSLVMAGARERYGPPKSAPRA 360 Query 361 YSQIEHELKVIAQLRFPGYFLVVHDITRFCRDNDILCQGRGSAANSAVCYALGVTAVDPV 420 YSQIEHELKVIAQLRFPGYFLVVHDITRFCRDNDILCQGRGSAANSAVCYALGVTAVDPV Sbjct 361 YSQIEHELKVIAQLRFPGYFLVVHDITRFCRDNDILCQGRGSAANSAVCYALGVTAVDPV 420 Query 421 ANELLFERFLSPARDGPPDIDIDIESDQREKVIQYVYHKYGRDYAAQVANVITYRGRSAV 480 ANELLFERFLSPARDGPPDIDIDIESDQREKVIQYVYHKYGRDYAAQVANVITYRGRSAV Sbjct 421 ANELLFERFLSPARDGPPDIDIDIESDQREKVIQYVYHKYGRDYAAQVANVITYRGRSAV 480 Query 481 RDMARALGFSPGQQDAWSKQVSHWTGQADDVDGIPEQVIDLATQIRNLPRHLGIHSGGMV 540 RDMARALGFSPGQQDAWSKQVSHWTGQADDVDGIPEQVIDLATQIRNLPRHLGIHSGGMV Sbjct 481 RDMARALGFSPGQQDAWSKQVSHWTGQADDVDGIPEQVIDLATQIRNLPRHLGIHSGGMV 540 Query 541 ICDRPIADVCPVEWARMANRSVLQWDKDDCAAIGLVKFDLLGLGMLSALHYAKDLVAEHK 600 ICDRPIADVCPVEWARMANRSVLQWDKDDCAAIGLVKFDLLGLGMLSALHYAKDLVAEHK Sbjct 541 ICDRPIADVCPVEWARMANRSVLQWDKDDCAAIGLVKFDLLGLGMLSALHYAKDLVAEHK 600 Query 601 GIEVDLARLDLSEPAVYEMLARADSVGVFQVESRAQMATLPRLKPRVFYDLVVEVALIRP 660 GIEVDLARLDLSEPAVYEMLARADSVGVFQVESRAQMATLPRLKPRVFYDLVVEVALIRP Sbjct 601 GIEVDLARLDLSEPAVYEMLARADSVGVFQVESRAQMATLPRLKPRVFYDLVVEVALIRP 660 Query 661 GPIQGGSVHPYIRRRNGVDPVIYEHPSMAPALRKTLGVPLFQEQLMQLAVDCAGFSAAEA 720 GPIQGGSVHPYIRRRNGVDPVIYEHPSMAPALRKTLGVPLFQEQLMQLAVDCAGFSAAEA Sbjct 661 GPIQGGSVHPYIRRRNGVDPVIYEHPSMAPALRKTLGVPLFQEQLMQLAVDCAGFSAAEA 720 Query 721 DQLRRAMGSKRSTERMRRLRGRFYDGMRALHGAPDEVIDRIYEKLEAFANFGFPESHALS 780 DQLRRAMGSKRSTERMRRLRGRFYDGMRALHGAPDEVIDRIYEKLEAFANFGFPESHALS Sbjct 721 DQLRRAMGSKRSTERMRRLRGRFYDGMRALHGAPDEVIDRIYEKLEAFANFGFPESHALS 780 Query 781 FASLVFYSAWFKLHHPAAFCAALLRAQPMGFYSPQSLVADARRHGVAVHGPCVNASLAHA 840 FASLVFYSAWFKLHHPAAFCAALLRAQPMGFYSPQSLVADARRHGVAVHGPCVNASLAHA Sbjct 781 FASLVFYSAWFKLHHPAAFCAALLRAQPMGFYSPQSLVADARRHGVAVHGPCVNASLAHA 840 Query 841 TCENAGTEVRLGLGAVRYLGAELAEKLVAERTANGPFTSLPDLTSRVQLSVPQVEALATA 900 TCENAGTEVRLGLGAVRYLGAELAEKLVAERTANGPFTSLPDLTSRVQLSVPQVEALATA Sbjct 841 TCENAGTEVRLGLGAVRYLGAELAEKLVAERTANGPFTSLPDLTSRVQLSVPQVEALATA 900 Query 901 GALGCFGMSRREALWAAGAAATGRPDRLPGVGSSSHIPALPGMSELELAAADVWA 955 GALGCFGMSRREALWAAGAAATGRPDRLPGVGSSSHIPALPGMSELELAAA VWA Sbjct 901 GALGCFGMSRREALWAAGAAATGRPDRLPGVGSSSHIPALPGMSELELAAAHVWA 955 >gi|118464788|ref|YP_883471.1| error-prone DNA polymerase [Mycobacterium avium 104] gi|118166075|gb|ABK66972.1| DNA polymerase III, alpha subunit, putative [Mycobacterium avium 104] Length=1093 Score = 1925 bits (4986), Expect = 0.0, Method: Compositional matrix adjust. Identities = 971/1083 (90%), Positives = 1012/1083 (94%), Gaps = 6/1083 (0%) Query 1 MERVLNGKPRHAG-VPAFDADGDVPRSRKRGAYQPPGRERVG-SSVAYAELHAHSAYSFL 58 MERVL+ KPR AG PA + DG P SR R Y+PP R SSV YAELHAHSA+SFL Sbjct 13 MERVLDSKPRRAGESPAPEPDG--PLSRGRATYRPPDEGRAARSSVPYAELHAHSAFSFL 70 Query 59 DGASTPEELVEEAARLGLCALALTDHDGLYGAVRFAEAAAELDVRTVFGAELSLGATART 118 DGASTPEE+VEEAARL L ALALTDHDGLYGAVRFAEAAAELDVRTVFGAELSLG +ART Sbjct 71 DGASTPEEMVEEAARLDLRALALTDHDGLYGAVRFAEAAAELDVRTVFGAELSLGPSART 130 Query 119 ERPDPPGPHLLVLARGPEGYRRLSRQLAAAHLAGGEKGKPRYDFDALTEAAGGHWHILTG 178 E PDPPGPHLLVLARGPEGYRRLSRQLAAAHLAGGEKGKPRYD DALTEAAGGHWHILTG Sbjct 131 EAPDPPGPHLLVLARGPEGYRRLSRQLAAAHLAGGEKGKPRYDLDALTEAAGGHWHILTG 190 Query 179 CRKGHVRQALSQGGPAAAQRALADLVDRFTPSRVSIELTHHGHPLDDERNAALAGLAPRF 238 CRKGHVRQALS+GGP A RALADLVDRF +RVSIELT HG PLDDERNAALA LAPRF Sbjct 191 CRKGHVRQALSEGGPDEAARALADLVDRFGAARVSIELTRHGQPLDDERNAALAALAPRF 250 Query 239 GVGIVATTGAHFADPSRGRLAMAMAAIRARRSLDSAAGWLAPLGGAHLRSGEEMARLFAW 298 GVG+VATTGAHFA PSR RLAMA+ AIRAR SLDSAAGWLAPLGG+HLRSGEEMARLFAW Sbjct 251 GVGVVATTGAHFAGPSRRRLAMAVGAIRARESLDSAAGWLAPLGGSHLRSGEEMARLFAW 310 Query 299 CPEAVTAAAELGERCAFGLQLIAPRLPPFDVPDGHTEDSWLRSLVMAGARERYGPPKSAP 358 CPEAVTAAAELGE+CAFGL LIAPRLPPFDVPDGHTEDSWLR L M GAR+RYG P+ AP Sbjct 311 CPEAVTAAAELGEQCAFGLALIAPRLPPFDVPDGHTEDSWLRQLTMTGARDRYGSPEHAP 370 Query 359 RAYSQIEHELKVIAQLRFPGYFLVVHDITRFCRDNDILCQGRGSAANSAVCYALGVTAVD 418 RAY+QIEHELKVIAQL+FPGYFLVVHDI RFCR+N+ILCQGRGSAANSAVCYALGVTAVD Sbjct 371 RAYAQIEHELKVIAQLQFPGYFLVVHDIARFCRENNILCQGRGSAANSAVCYALGVTAVD 430 Query 419 PVANELLFERFLSPARDGPPDIDIDIESDQREKVIQYVYHKYGRDYAAQVANVITYRGRS 478 PVANELLFERFLSPARDGPPDID+DIESDQREKVIQYVY +YGRDYAAQVANVITYRG+ Sbjct 431 PVANELLFERFLSPARDGPPDIDMDIESDQREKVIQYVYDRYGRDYAAQVANVITYRGKI 490 Query 479 AVRDMARALGFSPGQQDAWSKQVSHWTGQAD--DVDGIPEQVIDLATQIRNLPRHLGIHS 536 AVRDMARALGFS GQQDAWSKQ+S W+G AD DV+GIP QVIDLA Q+RNLPRHLGIHS Sbjct 491 AVRDMARALGFSQGQQDAWSKQISSWSGLADSPDVEGIPPQVIDLANQVRNLPRHLGIHS 550 Query 537 GGMVICDRPIADVCPVEWARMANRSVLQWDKDDCAAIGLVKFDLLGLGMLSALHYAKDLV 596 GGMVICDRPIADVCPVEWARM NRSVLQWDKDDCAAIGLVKFDLLGLGMLSALHYA DLV Sbjct 551 GGMVICDRPIADVCPVEWARMENRSVLQWDKDDCAAIGLVKFDLLGLGMLSALHYAIDLV 610 Query 597 AEHKGIEVDLARLDLSEPAVYEMLARADSVGVFQVESRAQMATLPRLKPRVFYDLVVEVA 656 AEHKGIEVDLARLDLSEPAVYEMLARADSVGVFQVESRAQMATLPRLKPRVFYDLVVEVA Sbjct 611 AEHKGIEVDLARLDLSEPAVYEMLARADSVGVFQVESRAQMATLPRLKPRVFYDLVVEVA 670 Query 657 LIRPGPIQGGSVHPYIRRRNGVDPVIYEHPSMAPALRKTLGVPLFQEQLMQLAVDCAGFS 716 LIRPGPIQGGSVHPYIRRRNGVDPV+Y+HPSM PALRKTLGVPLFQEQLMQLAVDCAGFS Sbjct 671 LIRPGPIQGGSVHPYIRRRNGVDPVLYDHPSMEPALRKTLGVPLFQEQLMQLAVDCAGFS 730 Query 717 AAEADQLRRAMGSKRSTERMRRLRGRFYDGMRALHGAPDEVIDRIYEKLEAFANFGFPES 776 AAEADQLRRAMGSKRSTERMRRLRGRFYDGMRALHGAPDEVIDR YEKLEAFANFGFPES Sbjct 731 AAEADQLRRAMGSKRSTERMRRLRGRFYDGMRALHGAPDEVIDRTYEKLEAFANFGFPES 790 Query 777 HALSFASLVFYSAWFKLHHPAAFCAALLRAQPMGFYSPQSLVADARRHGVAVHGPCVNAS 836 HALSFASLVFYS+WFKLHHPAAFCAALLRAQPMGFYSPQSLVADARRHGV VHGP VNAS Sbjct 791 HALSFASLVFYSSWFKLHHPAAFCAALLRAQPMGFYSPQSLVADARRHGVTVHGPDVNAS 850 Query 837 LAHATCENAGTEVRLGLGAVRYLGAELAEKLVAERTANGPFTSLPDLTSRVQLSVPQVEA 896 LAHAT ENAGTEVRLGLGAVR++G +LAEKLV ER ANGPF SL DLT+R+QLSVPQ EA Sbjct 851 LAHATLENAGTEVRLGLGAVRHIGDDLAEKLVQERKANGPFASLLDLTARLQLSVPQTEA 910 Query 897 LATAGALGCFGMSRREALWAAGAAATGRPDRLPGVGSSSHIPALPGMSELELAAADVWAT 956 LATAGA GCFGMSRREALWAAGAAAT RPDRLPGVGSSSHIPALPGMSELELAAADVWAT Sbjct 911 LATAGAFGCFGMSRREALWAAGAAATQRPDRLPGVGSSSHIPALPGMSELELAAADVWAT 970 Query 957 GVSPDSYPTQFLRADLDAMGVLPAERLGSVSDGDRVLIAGAVTHRQRPATAQGVTFINLE 1016 G+SPDSYPTQFLR DLDAMGV+PA RLGSV DGDRVLIAGAVTHRQRP TAQGVTF+NLE Sbjct 971 GISPDSYPTQFLRDDLDAMGVVPAARLGSVPDGDRVLIAGAVTHRQRPGTAQGVTFLNLE 1030 Query 1017 DETGMVNVLCTPGVWARHRKLAHTAPALLIRGQVQNASGAITVVAERMGRLTLAVGARSR 1076 DETGMVNVLCTPGVWARHRKLA+TAPALL+RGQVQNASGAITVVAER+GR+TLAVG+RSR Sbjct 1031 DETGMVNVLCTPGVWARHRKLANTAPALLVRGQVQNASGAITVVAERLGRITLAVGSRSR 1090 Query 1077 DFR 1079 DFR Sbjct 1091 DFR 1093 >gi|296168813|ref|ZP_06850495.1| DNA-directed DNA polymerase [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295896516|gb|EFG76163.1| DNA-directed DNA polymerase [Mycobacterium parascrofulaceum ATCC BAA-614] Length=1080 Score = 1923 bits (4982), Expect = 0.0, Method: Compositional matrix adjust. Identities = 961/1082 (89%), Positives = 1008/1082 (94%), Gaps = 5/1082 (0%) Query 1 MERVLNGKPRHAGVPAFDADGDVPRSRKRGAYQPP-GRERVGSSVAYAELHAHSAYSFLD 59 MERVL+ KPRHAGVPA + D P S +RG Y+PP G SSV YAELHAHSA+SFLD Sbjct 1 MERVLDSKPRHAGVPAGPGE-DGPLSSRRGTYRPPDGARGARSSVPYAELHAHSAFSFLD 59 Query 60 GASTPEELVEEAARLGLCALALTDHDGLYGAVRFAEAAAELDVRTVFGAELSLGATARTE 119 GASTPEELVEEAARLGL ALALTDHDGLYGAVRFAEAAAEL++RTVFGAELSLG ARTE Sbjct 60 GASTPEELVEEAARLGLRALALTDHDGLYGAVRFAEAAAELELRTVFGAELSLGPGARTE 119 Query 120 RPDPPGPHLLVLARGPEGYRRLSRQLAAAHLAGGEKGKPRYDFDALTEAAGGHWHILTGC 179 PDPPGPHLLVLARGPEGYRRLSRQLAAAHLAGGEKGKPRYDFDALTEAAGGHWHILTGC Sbjct 120 TPDPPGPHLLVLARGPEGYRRLSRQLAAAHLAGGEKGKPRYDFDALTEAAGGHWHILTGC 179 Query 180 RKGHVRQALSQGGPAAAQRALADLVDRFTPSRVSIELTHHGHPLDDERNAALAGLAPRFG 239 RKGHVRQALSQG P AA RALADLVDRF RVSIELTHHG P DDERNAALAGLAPRFG Sbjct 180 RKGHVRQALSQG-PDAAGRALADLVDRFGADRVSIELTHHGQPPDDERNAALAGLAPRFG 238 Query 240 VGIVATTGAHFADPSRGRLAMAMAAIRARRSLDSAAGWLAPLGGAHLRSGEEMARLFAWC 299 VG+VATTGAHFA PSR RLAMAM AIRAR+SLD+AAGWLAPLGG+HLRSGEEMARLFAW Sbjct 239 VGVVATTGAHFAGPSRRRLAMAMGAIRARQSLDAAAGWLAPLGGSHLRSGEEMARLFAWR 298 Query 300 PEAVTAAAELGERCAFGLQLIAPRLPPFDVPDGHTEDSWLRSLVMAGARERYGPPKSAPR 359 P+AVTAAA+LGE+CAFGL LIAPRLPPFDVP GHTEDSWLR L M GAR RYG P +APR Sbjct 299 PDAVTAAADLGEQCAFGLALIAPRLPPFDVPAGHTEDSWLRQLTMTGARGRYGTPDAAPR 358 Query 360 AYSQIEHELKVIAQLRFPGYFLVVHDITRFCRDNDILCQGRGSAANSAVCYALGVTAVDP 419 A+SQIEHELKVIA+L+FPGYFLVVHDI RFCR+N+ILCQGRGSAANSAVCYALGVTAVDP Sbjct 359 AFSQIEHELKVIARLQFPGYFLVVHDIARFCRENNILCQGRGSAANSAVCYALGVTAVDP 418 Query 420 VANELLFERFLSPARDGPPDIDIDIESDQREKVIQYVYHKYGRDYAAQVANVITYRGRSA 479 VANELLFERFLSPARDGPPDID+DIESDQREKVIQYVY KYGRDYAAQVANVITYRGR A Sbjct 419 VANELLFERFLSPARDGPPDIDMDIESDQREKVIQYVYDKYGRDYAAQVANVITYRGRIA 478 Query 480 VRDMARALGFSPGQQDAWSKQVSHWTGQAD--DVDGIPEQVIDLATQIRNLPRHLGIHSG 537 VRDMARALGFS GQQDAWSKQ+ HW G AD DV+GIP QV+DLA QIRNLPRH+GIHSG Sbjct 479 VRDMARALGFSQGQQDAWSKQLGHWNGLADSPDVEGIPPQVVDLANQIRNLPRHMGIHSG 538 Query 538 GMVICDRPIADVCPVEWARMANRSVLQWDKDDCAAIGLVKFDLLGLGMLSALHYAKDLVA 597 GMVICDRPIADVCPVEWARMANRSVLQWDKDDCAAIGLVKFDLLGLGMLSALHYA DLVA Sbjct 539 GMVICDRPIADVCPVEWARMANRSVLQWDKDDCAAIGLVKFDLLGLGMLSALHYAIDLVA 598 Query 598 EHKGIEVDLARLDLSEPAVYEMLARADSVGVFQVESRAQMATLPRLKPRVFYDLVVEVAL 657 EHKGIEVDLARLDLSEPAVYEMLARADSVGVFQVESRAQMATLPRLKPR+FYDLVVEVAL Sbjct 599 EHKGIEVDLARLDLSEPAVYEMLARADSVGVFQVESRAQMATLPRLKPRIFYDLVVEVAL 658 Query 658 IRPGPIQGGSVHPYIRRRNGVDPVIYEHPSMAPALRKTLGVPLFQEQLMQLAVDCAGFSA 717 IRPGPIQGGSVHPYIRRRNG+DPV+Y+HPSM PALRKTLGVPLFQEQLMQLAVDCAGFSA Sbjct 659 IRPGPIQGGSVHPYIRRRNGLDPVVYDHPSMEPALRKTLGVPLFQEQLMQLAVDCAGFSA 718 Query 718 AEADQLRRAMGSKRSTERMRRLRGRFYDGMRALHGAPDEVIDRIYEKLEAFANFGFPESH 777 AEADQLRRAMGSKRSTERMRRLR RFYDGMRALHGA DEVIDR YEKLEAFANFGFPESH Sbjct 719 AEADQLRRAMGSKRSTERMRRLRDRFYDGMRALHGATDEVIDRAYEKLEAFANFGFPESH 778 Query 778 ALSFASLVFYSAWFKLHHPAAFCAALLRAQPMGFYSPQSLVADARRHGVAVHGPCVNASL 837 ALSFASLVFYS+WFKLHHPAAFCAALLRAQPMGFYSPQSLVADARRHGV VHGP VNASL Sbjct 779 ALSFASLVFYSSWFKLHHPAAFCAALLRAQPMGFYSPQSLVADARRHGVTVHGPDVNASL 838 Query 838 AHATCENAGTEVRLGLGAVRYLGAELAEKLVAERTANGPFTSLPDLTSRVQLSVPQVEAL 897 AHAT ENAGTEVRLGLGAVR++G +LAE+LVAER ANGPF SL DLT+R+QLSVPQ EAL Sbjct 839 AHATLENAGTEVRLGLGAVRHIGDDLAERLVAERKANGPFASLLDLTTRLQLSVPQTEAL 898 Query 898 ATAGALGCFGMSRREALWAAGAAATGRPDRLPGVGSSSHIPALPGMSELELAAADVWATG 957 ATAGA GCFGMSRRE LWAAGAAAT RPDRLPGVGSSSH+PALPGMSELELAAADVWATG Sbjct 899 ATAGAFGCFGMSRREGLWAAGAAATQRPDRLPGVGSSSHVPALPGMSELELAAADVWATG 958 Query 958 VSPDSYPTQFLRADLDAMGVLPAERLGSVSDGDRVLIAGAVTHRQRPATAQGVTFINLED 1017 VSPDSYPTQFLRADLDAMGV+PA +L V DGDRVLIAGAVTHRQRP TAQGVTF+NLED Sbjct 959 VSPDSYPTQFLRADLDAMGVVPAGKLLDVPDGDRVLIAGAVTHRQRPGTAQGVTFLNLED 1018 Query 1018 ETGMVNVLCTPGVWARHRKLAHTAPALLIRGQVQNASGAITVVAERMGRLTLAVGARSRD 1077 ETGMVNVLCTP VWARHRKLA+ APA+L+RGQVQNASGA+TVVAER+GR+TLAVG+RSRD Sbjct 1019 ETGMVNVLCTPAVWARHRKLANAAPAMLVRGQVQNASGAVTVVAERLGRITLAVGSRSRD 1078 Query 1078 FR 1079 FR Sbjct 1079 FR 1080 >gi|254822689|ref|ZP_05227690.1| error-prone DNA polymerase [Mycobacterium intracellulare ATCC 13950] Length=1095 Score = 1916 bits (4964), Expect = 0.0, Method: Compositional matrix adjust. Identities = 957/1086 (89%), Positives = 1003/1086 (93%), Gaps = 10/1086 (0%) Query 1 MERVLNGKPRHAGVPAFDADGDVPRSRKRGAYQPPG-----RERVGSSVAYAELHAHSAY 55 MERVL+ KPR AG PA + D P SRKR Y+PPG R SV YAELHAHSA+ Sbjct 13 MERVLDSKPRRAGEPAGLPE-DAPLSRKRATYRPPGDGRAPRPSAARSVPYAELHAHSAF 71 Query 56 SFLDGASTPEELVEEAARLGLCALALTDHDGLYGAVRFAEAAAELDVRTVFGAELSLGAT 115 SFLDGASTPEELVEEAARLGL ALALTDHDGLYGAVRFAEAAAELD+RTVFGAELSLG Sbjct 72 SFLDGASTPEELVEEAARLGLRALALTDHDGLYGAVRFAEAAAELDMRTVFGAELSLGGE 131 Query 116 ARTERPDPPGPHLLVLARGPEGYRRLSRQLAAAHLAGGEKGKPRYDFDALTEAAGGHWHI 175 ARTERPDP GPHLLVLARGPEGYRRLSRQLAAAHLAGGEKGKPRYDFDALTEAAGGHWHI Sbjct 132 ARTERPDPAGPHLLVLARGPEGYRRLSRQLAAAHLAGGEKGKPRYDFDALTEAAGGHWHI 191 Query 176 LTGCRKGHVRQALSQGGPAAAQRALADLVDRFTPSRVSIELTHHGHPLDDERNAALAGLA 235 LTGCRKGHVRQALS GGP AA+RALADLVDRF VS+ELTHHG PLDDERNA LA LA Sbjct 192 LTGCRKGHVRQALSDGGPDAAERALADLVDRFGAQSVSVELTHHGQPLDDERNAVLAALA 251 Query 236 PRFGVGIVATTGAHFADPSRGRLAMAMAAIRARRSLDSAAGWLAPLGGAHLRSGEEMARL 295 PRFGVG+VATTGAHFA PSR RLAMAM AIRAR SLDSAAGWLAPLGG+HLRSG EMARL Sbjct 252 PRFGVGVVATTGAHFAGPSRRRLAMAMGAIRARESLDSAAGWLAPLGGSHLRSGAEMARL 311 Query 296 FAWCPEAVTAAAELGERCAFGLQLIAPRLPPFDVPDGHTEDSWLRSLVMAGARERYGPPK 355 FA P+ VTAAAELGE+CAFGL LIAP+LPPFDVPDGHTEDSWLR L MAGAR+RYGP Sbjct 312 FAGGPDVVTAAAELGEQCAFGLALIAPQLPPFDVPDGHTEDSWLRQLTMAGARDRYGP-- 369 Query 356 SAPRAYSQIEHELKVIAQLRFPGYFLVVHDITRFCRDNDILCQGRGSAANSAVCYALGVT 415 +APRAY+QIEHELKVIAQL+FPGYFLVVHDI RFCRDN+ILCQGRGSAANSAVCYALGVT Sbjct 370 NAPRAYAQIEHELKVIAQLQFPGYFLVVHDIARFCRDNNILCQGRGSAANSAVCYALGVT 429 Query 416 AVDPVANELLFERFLSPARDGPPDIDIDIESDQREKVIQYVYHKYGRDYAAQVANVITYR 475 AVDPVANELLFERFLSPARDGPPDID+DIESDQREKVIQYVY KYGRDYAAQVANVITYR Sbjct 430 AVDPVANELLFERFLSPARDGPPDIDMDIESDQREKVIQYVYDKYGRDYAAQVANVITYR 489 Query 476 GRSAVRDMARALGFSPGQQDAWSKQVSHWTGQAD--DVDGIPEQVIDLATQIRNLPRHLG 533 G+ AVRDMARALGFS GQQDAWSKQ+SHW G AD +V+ IPE VIDLA QIRNLPRH+G Sbjct 490 GKIAVRDMARALGFSQGQQDAWSKQISHWGGLADSPEVEDIPEPVIDLANQIRNLPRHMG 549 Query 534 IHSGGMVICDRPIADVCPVEWARMANRSVLQWDKDDCAAIGLVKFDLLGLGMLSALHYAK 593 IHSGGMVICDRPIADVCPVEWARM NRSVLQWDKDDCAAIGLVKFDLLGLGMLSALHYA Sbjct 550 IHSGGMVICDRPIADVCPVEWARMENRSVLQWDKDDCAAIGLVKFDLLGLGMLSALHYAI 609 Query 594 DLVAEHKGIEVDLARLDLSEPAVYEMLARADSVGVFQVESRAQMATLPRLKPRVFYDLVV 653 DLVAEHKGIEVDLARLDLSEPAVYEMLARADSVGVFQVESRAQMATLPRLKPRVFYDLVV Sbjct 610 DLVAEHKGIEVDLARLDLSEPAVYEMLARADSVGVFQVESRAQMATLPRLKPRVFYDLVV 669 Query 654 EVALIRPGPIQGGSVHPYIRRRNGVDPVIYEHPSMAPALRKTLGVPLFQEQLMQLAVDCA 713 EVALIRPGPIQGGSVHPYIRRRNG DPV+Y+HPSM PALRKTLGVPLFQEQLMQLAVDCA Sbjct 670 EVALIRPGPIQGGSVHPYIRRRNGEDPVVYDHPSMEPALRKTLGVPLFQEQLMQLAVDCA 729 Query 714 GFSAAEADQLRRAMGSKRSTERMRRLRGRFYDGMRALHGAPDEVIDRIYEKLEAFANFGF 773 GFSAAEADQLRRAMGSKRSTERMRRLRGRFY+GMRALHGAPDEVIDR YEKLEAFANFGF Sbjct 730 GFSAAEADQLRRAMGSKRSTERMRRLRGRFYEGMRALHGAPDEVIDRTYEKLEAFANFGF 789 Query 774 PESHALSFASLVFYSAWFKLHHPAAFCAALLRAQPMGFYSPQSLVADARRHGVAVHGPCV 833 PESHALSFASLVFYS+WFKLHHPAAFCAALLRAQPMGFYSPQSLVADARRHGV VHGP V Sbjct 790 PESHALSFASLVFYSSWFKLHHPAAFCAALLRAQPMGFYSPQSLVADARRHGVTVHGPDV 849 Query 834 NASLAHATCENAGTEVRLGLGAVRYLGAELAEKLVAERTANGPFTSLPDLTSRVQLSVPQ 893 NASLAHAT EN GTEVRLGLGAVR++G +LAE+LV ER ANGPF SL D+TSR+QLSVPQ Sbjct 850 NASLAHATLENTGTEVRLGLGAVRHIGDDLAEQLVEERKANGPFASLLDVTSRLQLSVPQ 909 Query 894 VEALATAGALGCFGMSRREALWAAGAAATGRPDRLPGVGSSSHIPALPGMSELELAAADV 953 EALATAGA CFGMSRRE LWAAGAAAT RP RLPGVGSSSH+PALPGMSELELAAADV Sbjct 910 TEALATAGAFACFGMSRREGLWAAGAAATQRPGRLPGVGSSSHVPALPGMSELELAAADV 969 Query 954 WATGVSPDSYPTQFLRADLDAMGVLPAERLGSVSDGDRVLIAGAVTHRQRPATAQGVTFI 1013 WATG+SPDSYPTQFLR DLDAMGV+PAE+LGSV DGDRVLIAGAVTHRQRP TAQGVTF+ Sbjct 970 WATGISPDSYPTQFLREDLDAMGVVPAEKLGSVPDGDRVLIAGAVTHRQRPGTAQGVTFL 1029 Query 1014 NLEDETGMVNVLCTPGVWARHRKLAHTAPALLIRGQVQNASGAITVVAERMGRLTLAVGA 1073 NLEDETGMVNVLC PGVWARHRKLA++APALL+RGQVQNA+GAITVVAER+GR+TLAVG+ Sbjct 1030 NLEDETGMVNVLCAPGVWARHRKLANSAPALLVRGQVQNATGAITVVAERLGRITLAVGS 1089 Query 1074 RSRDFR 1079 +SRDFR Sbjct 1090 KSRDFR 1095 >gi|183981180|ref|YP_001849471.1| DNA polymerase III, alpha chain, DnaE2 [Mycobacterium marinum M] gi|183174506|gb|ACC39616.1| DNA polymerase III, alpha chain, DnaE2 [Mycobacterium marinum M] Length=1100 Score = 1905 bits (4934), Expect = 0.0, Method: Compositional matrix adjust. Identities = 967/1088 (89%), Positives = 1012/1088 (94%), Gaps = 9/1088 (0%) Query 1 MERVLNGKPRHAGVP-----AFDADGDVPRSRKRGAYQP-PGRERVGSSVAYAELHAHSA 54 MERVL+GKPRHAGVP +A D P SRKR Y P P RV SS+AYAELHAHSA Sbjct 13 MERVLDGKPRHAGVPDAAGPTAEAGWDGPLSRKRETYAPKPDANRVDSSIAYAELHAHSA 72 Query 55 YSFLDGASTPEELVEEAARLGLCALALTDHDGLYGAVRFAEAAAELDVRTVFGAELSLGA 114 YSFLDGASTPEELVEEAARL L ALALTDH+GLYGAVRFAEAA+ L VRTVFGAELSLG Sbjct 73 YSFLDGASTPEELVEEAARLDLRALALTDHNGLYGAVRFAEAASGLGVRTVFGAELSLGP 132 Query 115 TARTERPDPPGPHLLVLARGPEGYRRLSRQLAAAHLAGGEKGKPRYDFDALTEAAGGHWH 174 ARTE+PDPPGPHLLVLARGPEGYRRLSRQLAAAHLAGGEKGKPRYDFD+LTEAAGGHWH Sbjct 133 EARTEQPDPPGPHLLVLARGPEGYRRLSRQLAAAHLAGGEKGKPRYDFDSLTEAAGGHWH 192 Query 175 ILTGCRKGHVRQALSQGGPAAAQRALADLVDRFTPSRVSIELTHHGHPLDDERNAALAGL 234 ILTGCRKGHVRQAL QGGP AA+RALADLVDRFT RVS+ELTHHGHPLDDE NA LAGL Sbjct 193 ILTGCRKGHVRQALRQGGPDAAERALADLVDRFTAGRVSVELTHHGHPLDDENNAMLAGL 252 Query 235 APRFGVGIVATTGAHFADPSRGRLAMAMAAIRARRSLDSAAGWLAPLGGAHLRSGEEMAR 294 APRFGVG+VATTGAHFA P+R RLAMAM AIRAR+SLDSAAGWLAPLGG+HLRSG EMAR Sbjct 253 APRFGVGVVATTGAHFAHPARSRLAMAMGAIRARQSLDSAAGWLAPLGGSHLRSGAEMAR 312 Query 295 LFAWCPEAVTAAAELGERCAFGLQLIAPRLPPFDVPDGHTEDSWLRSLVMAGARERYGPP 354 LFA P+ VTAAAELGE+CAFGL LIAPRLPPFDVPDGHTEDSWLRSLVM+GARERYG Sbjct 313 LFAQRPDVVTAAAELGEQCAFGLALIAPRLPPFDVPDGHTEDSWLRSLVMSGARERYGST 372 Query 355 KSAPRA---YSQIEHELKVIAQLRFPGYFLVVHDITRFCRDNDILCQGRGSAANSAVCYA 411 + +PRA Y+QIEHELKVIAQL FPGYFLVVHDIT+FCR NDILCQGRGSAANSAVCYA Sbjct 373 ERSPRARKAYTQIEHELKVIAQLSFPGYFLVVHDITQFCRRNDILCQGRGSAANSAVCYA 432 Query 412 LGVTAVDPVANELLFERFLSPARDGPPDIDIDIESDQREKVIQYVYHKYGRDYAAQVANV 471 LGVTAVDP+ANELLFERFLSP RDGPPDIDIDIESDQREKVIQYVY+KYGRDYAAQVANV Sbjct 433 LGVTAVDPIANELLFERFLSPERDGPPDIDIDIESDQREKVIQYVYNKYGRDYAAQVANV 492 Query 472 ITYRGRSAVRDMARALGFSPGQQDAWSKQVSHWTGQADDVDGIPEQVIDLATQIRNLPRH 531 ITYRGRSAVRDMARALGFS GQQDAWSKQ+ HW DDV+GIPEQVIDLA QIRNLPRH Sbjct 493 ITYRGRSAVRDMARALGFSQGQQDAWSKQIGHWNATPDDVEGIPEQVIDLAAQIRNLPRH 552 Query 532 LGIHSGGMVICDRPIADVCPVEWARMANRSVLQWDKDDCAAIGLVKFDLLGLGMLSALHY 591 +GIHSGGMVICDRPIADVCPVEWARMA+RSVLQWDKDDCAAIGLVKFDLLGLGMLSALHY Sbjct 553 MGIHSGGMVICDRPIADVCPVEWARMADRSVLQWDKDDCAAIGLVKFDLLGLGMLSALHY 612 Query 592 AKDLVAEHKGIEVDLARLDLSEPAVYEMLARADSVGVFQVESRAQMATLPRLKPRVFYDL 651 A+DLVAEHKGIEVDLARLDLSEPAVYEMLARADSVGVFQVESRAQMATLPRLKPRVFYDL Sbjct 613 ARDLVAEHKGIEVDLARLDLSEPAVYEMLARADSVGVFQVESRAQMATLPRLKPRVFYDL 672 Query 652 VVEVALIRPGPIQGGSVHPYIRRRNGVDPVIYEHPSMAPALRKTLGVPLFQEQLMQLAVD 711 VVEVALIRPGPIQGGSVHPYIRRRNG+DPV+YEHPSM ALRKTLGVPLFQEQLMQLAVD Sbjct 673 VVEVALIRPGPIQGGSVHPYIRRRNGIDPVVYEHPSMESALRKTLGVPLFQEQLMQLAVD 732 Query 712 CAGFSAAEADQLRRAMGSKRSTERMRRLRGRFYDGMRALHGAPDEVIDRIYEKLEAFANF 771 CAGFSAAEADQLRRA+GSKRSTERMRRLRGRFYDGMRALHGAPDEVIDRIYEKLEAFANF Sbjct 733 CAGFSAAEADQLRRAIGSKRSTERMRRLRGRFYDGMRALHGAPDEVIDRIYEKLEAFANF 792 Query 772 GFPESHALSFASLVFYSAWFKLHHPAAFCAALLRAQPMGFYSPQSLVADARRHGVAVHGP 831 GFPESHALSFASLVFYS+WFKLHHPAAFCAALLRAQPMGFYSPQSLVADARRHGV VHGP Sbjct 793 GFPESHALSFASLVFYSSWFKLHHPAAFCAALLRAQPMGFYSPQSLVADARRHGVLVHGP 852 Query 832 CVNASLAHATCENAGTEVRLGLGAVRYLGAELAEKLVAERTANGPFTSLPDLTSRVQLSV 891 VNASLAHAT ENAG +VRLGLGAVR++G +LAE LVAER NGPF SL +LTSRVQLSV Sbjct 853 DVNASLAHATLENAGMQVRLGLGAVRHIGDDLAESLVAERNDNGPFASLLNLTSRVQLSV 912 Query 892 PQVEALATAGALGCFGMSRREALWAAGAAATGRPDRLPGVGSSSHIPALPGMSELELAAA 951 PQ EALATAGALGCFGMSRREALWAAGAAAT RPDRLPGVGSSSHIP LPGMSELELAA+ Sbjct 913 PQTEALATAGALGCFGMSRREALWAAGAAATQRPDRLPGVGSSSHIPTLPGMSELELAAS 972 Query 952 DVWATGVSPDSYPTQFLRADLDAMGVLPAERLGSVSDGDRVLIAGAVTHRQRPATAQGVT 1011 DVWATG+SPDSYPTQFLRADLDA+GVL A L SV DG+RVLIAGAVTHRQRPATAQGVT Sbjct 973 DVWATGISPDSYPTQFLRADLDALGVLAAAALLSVPDGERVLIAGAVTHRQRPATAQGVT 1032 Query 1012 FINLEDETGMVNVLCTPGVWARHRKLAHTAPALLIRGQVQNASGAITVVAERMGRLTLAV 1071 FINLEDETGMVNVLCTPGVW RHRKLA+TAPALLIRGQVQNASGA+TVVAERMGR++LAV Sbjct 1033 FINLEDETGMVNVLCTPGVWVRHRKLANTAPALLIRGQVQNASGAVTVVAERMGRISLAV 1092 Query 1072 GARSRDFR 1079 G+RSRDFR Sbjct 1093 GSRSRDFR 1100 >gi|254776764|ref|ZP_05218280.1| error-prone DNA polymerase [Mycobacterium avium subsp. avium ATCC 25291] Length=1093 Score = 1901 bits (4925), Expect = 0.0, Method: Compositional matrix adjust. Identities = 966/1083 (90%), Positives = 1008/1083 (94%), Gaps = 6/1083 (0%) Query 1 MERVLNGKPRHAG-VPAFDADGDVPRSRKRGAYQPPGRERVG-SSVAYAELHAHSAYSFL 58 MERVL+ KPR AG PA + DG P SR R Y+PP R SSV YAELHAHSA+SFL Sbjct 13 MERVLDSKPRRAGESPAPEPDG--PLSRGRATYRPPDEGRAARSSVPYAELHAHSAFSFL 70 Query 59 DGASTPEELVEEAARLGLCALALTDHDGLYGAVRFAEAAAELDVRTVFGAELSLGATART 118 DG STPEE+VEEAARL L ALALTDHDGLYGAVRFAEAAAELDVRTVFGAELSLG +ART Sbjct 71 DGVSTPEEMVEEAARLDLRALALTDHDGLYGAVRFAEAAAELDVRTVFGAELSLGPSART 130 Query 119 ERPDPPGPHLLVLARGPEGYRRLSRQLAAAHLAGGEKGKPRYDFDALTEAAGGHWHILTG 178 E PDPPGPHLLVLARG EGYRRLSRQLA AHLAGGEKGKPRYD DALTEAAGGHWHILTG Sbjct 131 EAPDPPGPHLLVLARGAEGYRRLSRQLAVAHLAGGEKGKPRYDLDALTEAAGGHWHILTG 190 Query 179 CRKGHVRQALSQGGPAAAQRALADLVDRFTPSRVSIELTHHGHPLDDERNAALAGLAPRF 238 CRKGHVRQALS GGP AA RALADLVDRF +RVSIELT HG PLDDERNAALA LAPRF Sbjct 191 CRKGHVRQALSDGGPDAAARALADLVDRFGAARVSIELTRHGQPLDDERNAALAALAPRF 250 Query 239 GVGIVATTGAHFADPSRGRLAMAMAAIRARRSLDSAAGWLAPLGGAHLRSGEEMARLFAW 298 GVG+VATTGAHFA PSR RLAMA+ AIRAR SLDSAAGWLAPLGG+HLRSGEEMARLFAW Sbjct 251 GVGVVATTGAHFAGPSRRRLAMAVGAIRARESLDSAAGWLAPLGGSHLRSGEEMARLFAW 310 Query 299 CPEAVTAAAELGERCAFGLQLIAPRLPPFDVPDGHTEDSWLRSLVMAGARERYGPPKSAP 358 CPEAVTAAAELGE+CAFGL LIAPRLPPFDVPDGHTEDSWLR L M GAR+RYG P+ AP Sbjct 311 CPEAVTAAAELGEQCAFGLALIAPRLPPFDVPDGHTEDSWLRQLTMTGARDRYGSPERAP 370 Query 359 RAYSQIEHELKVIAQLRFPGYFLVVHDITRFCRDNDILCQGRGSAANSAVCYALGVTAVD 418 RAY+QIEHELKVIAQL+FPGYFLVVHDI RFCR+N+ILCQGRGSAANSAVCYALGVTAVD Sbjct 371 RAYAQIEHELKVIAQLQFPGYFLVVHDIARFCRENNILCQGRGSAANSAVCYALGVTAVD 430 Query 419 PVANELLFERFLSPARDGPPDIDIDIESDQREKVIQYVYHKYGRDYAAQVANVITYRGRS 478 PVANELLFERFLSPARDGPPDID+DIESDQREKVIQYVY +YGRDYAAQVANVITYRG+ Sbjct 431 PVANELLFERFLSPARDGPPDIDMDIESDQREKVIQYVYDRYGRDYAAQVANVITYRGKI 490 Query 479 AVRDMARALGFSPGQQDAWSKQVSHWTGQAD--DVDGIPEQVIDLATQIRNLPRHLGIHS 536 AVRDMARALG+S GQQDAWSKQ+S W+G AD DV+GIP QVIDLA Q+RNLPRHLGIHS Sbjct 491 AVRDMARALGYSQGQQDAWSKQISSWSGLADSPDVEGIPPQVIDLANQVRNLPRHLGIHS 550 Query 537 GGMVICDRPIADVCPVEWARMANRSVLQWDKDDCAAIGLVKFDLLGLGMLSALHYAKDLV 596 GGMVICDRPIADVCPVEWARM NRSVLQWDKDDCAAIGLVKFDLLGLGMLSALHYA DLV Sbjct 551 GGMVICDRPIADVCPVEWARMENRSVLQWDKDDCAAIGLVKFDLLGLGMLSALHYAIDLV 610 Query 597 AEHKGIEVDLARLDLSEPAVYEMLARADSVGVFQVESRAQMATLPRLKPRVFYDLVVEVA 656 AEHKGIEVDL+RLDLSEPAVYEMLARADSVGVFQVESRAQMATLPRLKPRVFYDLVVEVA Sbjct 611 AEHKGIEVDLSRLDLSEPAVYEMLARADSVGVFQVESRAQMATLPRLKPRVFYDLVVEVA 670 Query 657 LIRPGPIQGGSVHPYIRRRNGVDPVIYEHPSMAPALRKTLGVPLFQEQLMQLAVDCAGFS 716 LIRPGPIQGGSVHPYIRRRNGVDPV+Y+HPSM PALRKTLGVPLFQEQLMQLAVDCAGFS Sbjct 671 LIRPGPIQGGSVHPYIRRRNGVDPVLYDHPSMEPALRKTLGVPLFQEQLMQLAVDCAGFS 730 Query 717 AAEADQLRRAMGSKRSTERMRRLRGRFYDGMRALHGAPDEVIDRIYEKLEAFANFGFPES 776 AAEADQLRRAMGSKRSTERMRRLRGRFYDGMRALHGAPDEVIDR YEKLEAFANFGFPES Sbjct 731 AAEADQLRRAMGSKRSTERMRRLRGRFYDGMRALHGAPDEVIDRTYEKLEAFANFGFPES 790 Query 777 HALSFASLVFYSAWFKLHHPAAFCAALLRAQPMGFYSPQSLVADARRHGVAVHGPCVNAS 836 HALSFASLVFYS+WFKLHHPAAFCAALLRAQPMGFYSPQSLVADARRHGV VHGP VNAS Sbjct 791 HALSFASLVFYSSWFKLHHPAAFCAALLRAQPMGFYSPQSLVADARRHGVTVHGPDVNAS 850 Query 837 LAHATCENAGTEVRLGLGAVRYLGAELAEKLVAERTANGPFTSLPDLTSRVQLSVPQVEA 896 LAHAT ENAGTEVRLGLGAVR++G +LAEKLV ER ANGPF SL DLT+R+ LSVPQ EA Sbjct 851 LAHATLENAGTEVRLGLGAVRHIGDDLAEKLVQERKANGPFASLLDLTARLHLSVPQTEA 910 Query 897 LATAGALGCFGMSRREALWAAGAAATGRPDRLPGVGSSSHIPALPGMSELELAAADVWAT 956 LATAGA GCFGMSRREALWAAGAAAT RPDRLPGVGSSSHIPALPGMSELELAAADVWAT Sbjct 911 LATAGAFGCFGMSRREALWAAGAAATQRPDRLPGVGSSSHIPALPGMSELELAAADVWAT 970 Query 957 GVSPDSYPTQFLRADLDAMGVLPAERLGSVSDGDRVLIAGAVTHRQRPATAQGVTFINLE 1016 G+SPDSYPTQFLR DLDAMGV+PA RLGSV DGDRVLIAGAVTHRQRP TAQGVTF+NLE Sbjct 971 GISPDSYPTQFLRDDLDAMGVVPAARLGSVPDGDRVLIAGAVTHRQRPGTAQGVTFLNLE 1030 Query 1017 DETGMVNVLCTPGVWARHRKLAHTAPALLIRGQVQNASGAITVVAERMGRLTLAVGARSR 1076 DETGMVNVLCTPGVWARHRKLA+TAPALL+RGQVQNASGAITVVAER+GR+TLAVG+RSR Sbjct 1031 DETGMVNVLCTPGVWARHRKLANTAPALLVRGQVQNASGAITVVAERLGRITLAVGSRSR 1090 Query 1077 DFR 1079 DFR Sbjct 1091 DFR 1093 >gi|336459770|gb|EGO38685.1| DNA-directed DNA polymerase III PolC [Mycobacterium avium subsp. paratuberculosis S397] Length=1081 Score = 1901 bits (4924), Expect = 0.0, Method: Compositional matrix adjust. Identities = 966/1082 (90%), Positives = 1007/1082 (94%), Gaps = 4/1082 (0%) Query 1 MERVLNGKPRHAGVPAFDADGDVPRSRKRGAYQPPGRERVG-SSVAYAELHAHSAYSFLD 59 MERVL+ KPR AG A + D P SR R Y+PP R SSV YAELHAHSA+SFLD Sbjct 1 MERVLDSKPRRAGESAA-PEPDGPLSRGRATYRPPDEGRAARSSVPYAELHAHSAFSFLD 59 Query 60 GASTPEELVEEAARLGLCALALTDHDGLYGAVRFAEAAAELDVRTVFGAELSLGATARTE 119 GASTPEE+VEEAARL L ALALTDHDGLYGAVRFAEAAAELDVRTVFGAELSLG +ARTE Sbjct 60 GASTPEEMVEEAARLDLRALALTDHDGLYGAVRFAEAAAELDVRTVFGAELSLGPSARTE 119 Query 120 RPDPPGPHLLVLARGPEGYRRLSRQLAAAHLAGGEKGKPRYDFDALTEAAGGHWHILTGC 179 PDPPGPHLLVLARGPEGYRRLSRQLAAAHLAGGEKGKPRYD DALTEAAGGHWHILTGC Sbjct 120 APDPPGPHLLVLARGPEGYRRLSRQLAAAHLAGGEKGKPRYDLDALTEAAGGHWHILTGC 179 Query 180 RKGHVRQALSQGGPAAAQRALADLVDRFTPSRVSIELTHHGHPLDDERNAALAGLAPRFG 239 RKGHVRQALS GGP AA RALADLVDRF +RVSIELT HG PLDDERNAALA LAPRFG Sbjct 180 RKGHVRQALSDGGPDAAARALADLVDRFGAARVSIELTRHGQPLDDERNAALAALAPRFG 239 Query 240 VGIVATTGAHFADPSRGRLAMAMAAIRARRSLDSAAGWLAPLGGAHLRSGEEMARLFAWC 299 VG+VATTGAHFA PSR RLAMAM AIRAR SLDSAAGWLAPLGG+HLRSG EMARLFAW Sbjct 240 VGVVATTGAHFAGPSRRRLAMAMGAIRARESLDSAAGWLAPLGGSHLRSGAEMARLFAWR 299 Query 300 PEAVTAAAELGERCAFGLQLIAPRLPPFDVPDGHTEDSWLRSLVMAGARERYGPPKSAPR 359 P+AVTAAAELGE+CAFGL LIAPRLPPFDVPDGHTEDSWLR L M GAR+RYG P+ APR Sbjct 300 PQAVTAAAELGEQCAFGLALIAPRLPPFDVPDGHTEDSWLRQLTMTGARDRYGSPEHAPR 359 Query 360 AYSQIEHELKVIAQLRFPGYFLVVHDITRFCRDNDILCQGRGSAANSAVCYALGVTAVDP 419 AY+QIEHELKVIAQL+FPGYFLVVHDI RFCR+N+ILCQGRGSAANSAVCYALGVTAVDP Sbjct 360 AYAQIEHELKVIAQLQFPGYFLVVHDIARFCRENNILCQGRGSAANSAVCYALGVTAVDP 419 Query 420 VANELLFERFLSPARDGPPDIDIDIESDQREKVIQYVYHKYGRDYAAQVANVITYRGRSA 479 VANELLFERFLSPARDGPPDID+DIESDQREKVIQYVY +YGRDYAAQVANVITYRG+ A Sbjct 420 VANELLFERFLSPARDGPPDIDMDIESDQREKVIQYVYDRYGRDYAAQVANVITYRGKIA 479 Query 480 VRDMARALGFSPGQQDAWSKQVSHWTGQAD--DVDGIPEQVIDLATQIRNLPRHLGIHSG 537 VRDMARALG+S GQQDAWSKQ+S W+G AD DV+GIP QVIDLA Q+RNLPRHLGIHSG Sbjct 480 VRDMARALGYSQGQQDAWSKQISSWSGPADSPDVEGIPPQVIDLANQVRNLPRHLGIHSG 539 Query 538 GMVICDRPIADVCPVEWARMANRSVLQWDKDDCAAIGLVKFDLLGLGMLSALHYAKDLVA 597 GMVICDRPIADVCPVEWARM NRSVLQWDKDDCAAIGLVKFDLLGLGMLSALHYA DLVA Sbjct 540 GMVICDRPIADVCPVEWARMENRSVLQWDKDDCAAIGLVKFDLLGLGMLSALHYAIDLVA 599 Query 598 EHKGIEVDLARLDLSEPAVYEMLARADSVGVFQVESRAQMATLPRLKPRVFYDLVVEVAL 657 EHKGIEVDLARLDLSEPAVYEMLARADSVGVFQVESRAQMATLPRLKPRVFYDLVVEVAL Sbjct 600 EHKGIEVDLARLDLSEPAVYEMLARADSVGVFQVESRAQMATLPRLKPRVFYDLVVEVAL 659 Query 658 IRPGPIQGGSVHPYIRRRNGVDPVIYEHPSMAPALRKTLGVPLFQEQLMQLAVDCAGFSA 717 IRPGPIQGGSVHPYIRRRNGVDPV+Y+HPSM PALRKTLGVPLFQEQLMQLAVDCAGFSA Sbjct 660 IRPGPIQGGSVHPYIRRRNGVDPVLYDHPSMEPALRKTLGVPLFQEQLMQLAVDCAGFSA 719 Query 718 AEADQLRRAMGSKRSTERMRRLRGRFYDGMRALHGAPDEVIDRIYEKLEAFANFGFPESH 777 AEADQLRRAMGSKRSTERMRRLR RFYDGMRALHGAPDEVIDR YEKLEAFANFGFPESH Sbjct 720 AEADQLRRAMGSKRSTERMRRLRSRFYDGMRALHGAPDEVIDRTYEKLEAFANFGFPESH 779 Query 778 ALSFASLVFYSAWFKLHHPAAFCAALLRAQPMGFYSPQSLVADARRHGVAVHGPCVNASL 837 ALSFASLVFYS+WFKLHHPAAFCAALLRAQPMGFYSPQSLVADARRHGV VHGP VNASL Sbjct 780 ALSFASLVFYSSWFKLHHPAAFCAALLRAQPMGFYSPQSLVADARRHGVTVHGPDVNASL 839 Query 838 AHATCENAGTEVRLGLGAVRYLGAELAEKLVAERTANGPFTSLPDLTSRVQLSVPQVEAL 897 AHAT ENAGTEVRLGLGAVR++G +LAEKLV ER ANGPFTSL DLT+R+QLSV Q EAL Sbjct 840 AHATLENAGTEVRLGLGAVRHIGDDLAEKLVQERKANGPFTSLLDLTARLQLSVQQTEAL 899 Query 898 ATAGALGCFGMSRREALWAAGAAATGRPDRLPGVGSSSHIPALPGMSELELAAADVWATG 957 ATAGA GCFGMSRREALWAAGAAAT RPDRLPGVGSSSHIPALPGMSELELAAADVWATG Sbjct 900 ATAGAFGCFGMSRREALWAAGAAATQRPDRLPGVGSSSHIPALPGMSELELAAADVWATG 959 Query 958 VSPDSYPTQFLRADLDAMGVLPAERLGSVSDGDRVLIAGAVTHRQRPATAQGVTFINLED 1017 +SPDSYPTQFLR DLDAMGV+PA RLGSV DGDRVLIAGAVTHRQRP TAQGVTF+NLED Sbjct 960 ISPDSYPTQFLRDDLDAMGVVPAARLGSVPDGDRVLIAGAVTHRQRPGTAQGVTFLNLED 1019 Query 1018 ETGMVNVLCTPGVWARHRKLAHTAPALLIRGQVQNASGAITVVAERMGRLTLAVGARSRD 1077 ETGMVNVLCTPGVWARHRKLA+TAPALL+RGQVQNASGAITVVAER+GR+TLAVG+RSRD Sbjct 1020 ETGMVNVLCTPGVWARHRKLANTAPALLVRGQVQNASGAITVVAERLGRITLAVGSRSRD 1079 Query 1078 FR 1079 FR Sbjct 1080 FR 1081 >gi|118616689|ref|YP_905021.1| error-prone DNA polymerase [Mycobacterium ulcerans Agy99] gi|118568799|gb|ABL03550.1| DNA polymerase III, alpha chain, DnaE2 [Mycobacterium ulcerans Agy99] Length=1088 Score = 1898 bits (4917), Expect = 0.0, Method: Compositional matrix adjust. Identities = 962/1088 (89%), Positives = 1008/1088 (93%), Gaps = 9/1088 (0%) Query 1 MERVLNGKPRHAGVP-----AFDADGDVPRSRKRGAYQP-PGRERVGSSVAYAELHAHSA 54 MERVL+GKPRHAGVP +A D P SRKR Y P P RV SS+AYAELHAHSA Sbjct 1 MERVLDGKPRHAGVPDAAGPTAEAGWDGPLSRKRETYAPKPDANRVDSSIAYAELHAHSA 60 Query 55 YSFLDGASTPEELVEEAARLGLCALALTDHDGLYGAVRFAEAAAELDVRTVFGAELSLGA 114 YSFLDGASTPEELVEEAARL L ALALTDH+GLYGAVRFAEAA+ L VRTVFGAELSLG Sbjct 61 YSFLDGASTPEELVEEAARLDLRALALTDHNGLYGAVRFAEAASGLGVRTVFGAELSLGP 120 Query 115 TARTERPDPPGPHLLVLARGPEGYRRLSRQLAAAHLAGGEKGKPRYDFDALTEAAGGHWH 174 ARTE+PDPPGPHLLVLARGPEGYRRLSRQLAAAHLAGGEKGKPRYDFD+LTEAAGGHWH Sbjct 121 EARTEQPDPPGPHLLVLARGPEGYRRLSRQLAAAHLAGGEKGKPRYDFDSLTEAAGGHWH 180 Query 175 ILTGCRKGHVRQALSQGGPAAAQRALADLVDRFTPSRVSIELTHHGHPLDDERNAALAGL 234 ILTGCRKGHVRQAL QGGP AA+R LADLVDRFT RVS+ELTHHGHPLDDE NA LAGL Sbjct 181 ILTGCRKGHVRQALRQGGPDAAERVLADLVDRFTAGRVSVELTHHGHPLDDENNAMLAGL 240 Query 235 APRFGVGIVATTGAHFADPSRGRLAMAMAAIRARRSLDSAAGWLAPLGGAHLRSGEEMAR 294 APRFGVG+VATTGAHFA P+R RLAMAM AIRAR+SLDSAAGWLAPLGG+HLRSG EMAR Sbjct 241 APRFGVGVVATTGAHFAHPARSRLAMAMGAIRARQSLDSAAGWLAPLGGSHLRSGAEMAR 300 Query 295 LFAWCPEAVTAAAELGERCAFGLQLIAPRLPPFDVPDGHTEDSWLRSLVMAGARERYGPP 354 LFA P+ VTAAAELGE+CAFGL LIAPRLPPFDVPDGHTEDSWLRSLVM+GARERYG Sbjct 301 LFAQRPDVVTAAAELGEQCAFGLALIAPRLPPFDVPDGHTEDSWLRSLVMSGARERYGST 360 Query 355 KSAPRA---YSQIEHELKVIAQLRFPGYFLVVHDITRFCRDNDILCQGRGSAANSAVCYA 411 + +PRA Y+QIEHELKVIAQL FPGYFLVVHDIT+FCR NDILCQGRGSAANSAVCYA Sbjct 361 ERSPRARKAYAQIEHELKVIAQLSFPGYFLVVHDITQFCRRNDILCQGRGSAANSAVCYA 420 Query 412 LGVTAVDPVANELLFERFLSPARDGPPDIDIDIESDQREKVIQYVYHKYGRDYAAQVANV 471 LGVTAVDP+ANELLFERFLSP RDGPPDIDIDIESDQREKVIQYVY+KYGRDYAAQVANV Sbjct 421 LGVTAVDPIANELLFERFLSPERDGPPDIDIDIESDQREKVIQYVYNKYGRDYAAQVANV 480 Query 472 ITYRGRSAVRDMARALGFSPGQQDAWSKQVSHWTGQADDVDGIPEQVIDLATQIRNLPRH 531 ITYRGRSAVRDMARALGFS GQQDAWSKQ+ HW DDV+GIPEQVIDLA QIRNLPRH Sbjct 481 ITYRGRSAVRDMARALGFSQGQQDAWSKQIGHWNATLDDVEGIPEQVIDLAAQIRNLPRH 540 Query 532 LGIHSGGMVICDRPIADVCPVEWARMANRSVLQWDKDDCAAIGLVKFDLLGLGMLSALHY 591 +GIHSGGMVICDRPIADVCPVEWARMA+RSVLQWDKDDCAAIGLVKFDLLGLGMLSALHY Sbjct 541 MGIHSGGMVICDRPIADVCPVEWARMADRSVLQWDKDDCAAIGLVKFDLLGLGMLSALHY 600 Query 592 AKDLVAEHKGIEVDLARLDLSEPAVYEMLARADSVGVFQVESRAQMATLPRLKPRVFYDL 651 A+DLVAEHKGIEVDLARLDLSEPAVYEMLARADSVGVFQVESRAQMATLPRLKPRVFYDL Sbjct 601 ARDLVAEHKGIEVDLARLDLSEPAVYEMLARADSVGVFQVESRAQMATLPRLKPRVFYDL 660 Query 652 VVEVALIRPGPIQGGSVHPYIRRRNGVDPVIYEHPSMAPALRKTLGVPLFQEQLMQLAVD 711 VVEVALIRPGPIQGGSVHPYIRRR+G+DPV+YEHPSM ALRKTLGVPLFQEQLMQLAVD Sbjct 661 VVEVALIRPGPIQGGSVHPYIRRRSGIDPVVYEHPSMESALRKTLGVPLFQEQLMQLAVD 720 Query 712 CAGFSAAEADQLRRAMGSKRSTERMRRLRGRFYDGMRALHGAPDEVIDRIYEKLEAFANF 771 CAGFSAAEADQLRRA+GSKRSTERMRRLRGRFYDGMRALHGAPDEVIDRIYEKLEAFANF Sbjct 721 CAGFSAAEADQLRRAIGSKRSTERMRRLRGRFYDGMRALHGAPDEVIDRIYEKLEAFANF 780 Query 772 GFPESHALSFASLVFYSAWFKLHHPAAFCAALLRAQPMGFYSPQSLVADARRHGVAVHGP 831 GFPESHALSFASLVFYS+WFKLHHPAAFCAALLRAQPMGFYSPQSLVADARRHGV VHGP Sbjct 781 GFPESHALSFASLVFYSSWFKLHHPAAFCAALLRAQPMGFYSPQSLVADARRHGVLVHGP 840 Query 832 CVNASLAHATCENAGTEVRLGLGAVRYLGAELAEKLVAERTANGPFTSLPDLTSRVQLSV 891 VNASLAHAT ENAG +VRLGLGAVR++G +LAE LVAER NGPF SL +LTSRVQLSV Sbjct 841 DVNASLAHATLENAGMQVRLGLGAVRHIGDDLAESLVAERNDNGPFASLLNLTSRVQLSV 900 Query 892 PQVEALATAGALGCFGMSRREALWAAGAAATGRPDRLPGVGSSSHIPALPGMSELELAAA 951 PQ EALAT GALGCFGMSRREALWAAGAAAT RPDRLPGVGSSSHIP LPGMSELELAA+ Sbjct 901 PQTEALATTGALGCFGMSRREALWAAGAAATQRPDRLPGVGSSSHIPTLPGMSELELAAS 960 Query 952 DVWATGVSPDSYPTQFLRADLDAMGVLPAERLGSVSDGDRVLIAGAVTHRQRPATAQGVT 1011 DVWATG+SPDSYPTQFLRADLDA+GVL A L SV DG+RVLIAGAVTHRQRPATAQGVT Sbjct 961 DVWATGISPDSYPTQFLRADLDALGVLAAAALLSVPDGERVLIAGAVTHRQRPATAQGVT 1020 Query 1012 FINLEDETGMVNVLCTPGVWARHRKLAHTAPALLIRGQVQNASGAITVVAERMGRLTLAV 1071 FINLEDETGMVNVLCTPGVW RHRKLA+TAP LLIRGQVQNAS A+TVVAERMGR++LAV Sbjct 1021 FINLEDETGMVNVLCTPGVWMRHRKLANTAPVLLIRGQVQNASSAVTVVAERMGRISLAV 1080 Query 1072 GARSRDFR 1079 G+RSRDFR Sbjct 1081 GSRSRDFR 1088 >gi|41409574|ref|NP_962410.1| error-prone DNA polymerase [Mycobacterium avium subsp. paratuberculosis K-10] gi|71151829|sp|Q73U92.1|DNAE2_MYCPA RecName: Full=Error-prone DNA polymerase gi|41398405|gb|AAS06026.1| DnaE2 [Mycobacterium avium subsp. paratuberculosis K-10] Length=1093 Score = 1897 bits (4915), Expect = 0.0, Method: Compositional matrix adjust. Identities = 966/1082 (90%), Positives = 1007/1082 (94%), Gaps = 4/1082 (0%) Query 1 MERVLNGKPRHAGVPAFDADGDVPRSRKRGAYQPPGRERVG-SSVAYAELHAHSAYSFLD 59 MERVL+ KPR AG A + D P SR R Y+PP R SSV YAELHAHSA+SFLD Sbjct 13 MERVLDSKPRRAGESAA-PEPDGPLSRGRATYRPPDEGRAARSSVPYAELHAHSAFSFLD 71 Query 60 GASTPEELVEEAARLGLCALALTDHDGLYGAVRFAEAAAELDVRTVFGAELSLGATARTE 119 GASTPEE+VEEAARL L ALALTDHDGLYGAVRFAEAAAELDVRTVFGAELSLG +ARTE Sbjct 72 GASTPEEMVEEAARLDLRALALTDHDGLYGAVRFAEAAAELDVRTVFGAELSLGPSARTE 131 Query 120 RPDPPGPHLLVLARGPEGYRRLSRQLAAAHLAGGEKGKPRYDFDALTEAAGGHWHILTGC 179 PDPPGPHLLVLARGPEGYRRLSRQLAAAHLAGGEKGKPRYD DALTEAAGGHWHILTGC Sbjct 132 APDPPGPHLLVLARGPEGYRRLSRQLAAAHLAGGEKGKPRYDLDALTEAAGGHWHILTGC 191 Query 180 RKGHVRQALSQGGPAAAQRALADLVDRFTPSRVSIELTHHGHPLDDERNAALAGLAPRFG 239 RKGHVRQALS GGP AA RALADLVDRF +RVSIELT HG PLDDERNAALA LAPRFG Sbjct 192 RKGHVRQALSDGGPDAAARALADLVDRFGAARVSIELTRHGQPLDDERNAALAALAPRFG 251 Query 240 VGIVATTGAHFADPSRGRLAMAMAAIRARRSLDSAAGWLAPLGGAHLRSGEEMARLFAWC 299 VG+VATTGAHFA PSR RLAMAM AIRAR SLDSAAGWLAPLGG+HLRSG EMARLFAW Sbjct 252 VGVVATTGAHFAGPSRRRLAMAMGAIRARESLDSAAGWLAPLGGSHLRSGAEMARLFAWR 311 Query 300 PEAVTAAAELGERCAFGLQLIAPRLPPFDVPDGHTEDSWLRSLVMAGARERYGPPKSAPR 359 P+AVTAAAELGE+CAFGL LIAPRLPPFDVPDGHTEDSWLR L M GAR+RYG P+ APR Sbjct 312 PQAVTAAAELGEQCAFGLALIAPRLPPFDVPDGHTEDSWLRQLTMTGARDRYGSPEHAPR 371 Query 360 AYSQIEHELKVIAQLRFPGYFLVVHDITRFCRDNDILCQGRGSAANSAVCYALGVTAVDP 419 AY+QIEHELKVIAQL+FPGYFLVVHDI RFCR+N+ILCQGRGSAANSAVCYALGVTAVDP Sbjct 372 AYAQIEHELKVIAQLQFPGYFLVVHDIARFCRENNILCQGRGSAANSAVCYALGVTAVDP 431 Query 420 VANELLFERFLSPARDGPPDIDIDIESDQREKVIQYVYHKYGRDYAAQVANVITYRGRSA 479 VANELLFERFLSPARDGPPDID+DIESDQREKVIQYVY +YGRDYAAQVANVITYRG+ A Sbjct 432 VANELLFERFLSPARDGPPDIDMDIESDQREKVIQYVYDRYGRDYAAQVANVITYRGKIA 491 Query 480 VRDMARALGFSPGQQDAWSKQVSHWTGQAD--DVDGIPEQVIDLATQIRNLPRHLGIHSG 537 VRDMARALG+S GQQDAWSKQ+S W+G AD DV+GIP QVIDLA Q+RNLPRHLGIHSG Sbjct 492 VRDMARALGYSQGQQDAWSKQISSWSGPADSPDVEGIPPQVIDLANQVRNLPRHLGIHSG 551 Query 538 GMVICDRPIADVCPVEWARMANRSVLQWDKDDCAAIGLVKFDLLGLGMLSALHYAKDLVA 597 GMVICDRPIADVCPVEWARM NRSVLQWDKDDCAAIGLVKFDLLGLGMLSALHYA DLVA Sbjct 552 GMVICDRPIADVCPVEWARMENRSVLQWDKDDCAAIGLVKFDLLGLGMLSALHYAIDLVA 611 Query 598 EHKGIEVDLARLDLSEPAVYEMLARADSVGVFQVESRAQMATLPRLKPRVFYDLVVEVAL 657 EHKGIEVDLARLDLSEPAVYEMLARADSVGVFQVESRAQMATLPRLKPRVFYDLVVEVAL Sbjct 612 EHKGIEVDLARLDLSEPAVYEMLARADSVGVFQVESRAQMATLPRLKPRVFYDLVVEVAL 671 Query 658 IRPGPIQGGSVHPYIRRRNGVDPVIYEHPSMAPALRKTLGVPLFQEQLMQLAVDCAGFSA 717 IRPGPIQGGSVHPYIRRRNGVDPV+Y+HPSM PALRKTLGVPLFQEQLMQLAVDCAGFSA Sbjct 672 IRPGPIQGGSVHPYIRRRNGVDPVLYDHPSMEPALRKTLGVPLFQEQLMQLAVDCAGFSA 731 Query 718 AEADQLRRAMGSKRSTERMRRLRGRFYDGMRALHGAPDEVIDRIYEKLEAFANFGFPESH 777 AEADQLRRAMGSKRSTERMRRLR RFYDGMRALHGAPDEVIDR YEKLEAFANFGFPESH Sbjct 732 AEADQLRRAMGSKRSTERMRRLRSRFYDGMRALHGAPDEVIDRTYEKLEAFANFGFPESH 791 Query 778 ALSFASLVFYSAWFKLHHPAAFCAALLRAQPMGFYSPQSLVADARRHGVAVHGPCVNASL 837 ALSFASLVFYS+WFKLHHPAAFCAALLRAQPMGFYSPQSLVADARRHGV VHGP VNASL Sbjct 792 ALSFASLVFYSSWFKLHHPAAFCAALLRAQPMGFYSPQSLVADARRHGVTVHGPDVNASL 851 Query 838 AHATCENAGTEVRLGLGAVRYLGAELAEKLVAERTANGPFTSLPDLTSRVQLSVPQVEAL 897 AHAT ENAGTEVRLGLGAVR++G +LAEKLV ER ANGPFTSL DLT+R+QLSV Q EAL Sbjct 852 AHATLENAGTEVRLGLGAVRHIGDDLAEKLVQERKANGPFTSLLDLTARLQLSVQQTEAL 911 Query 898 ATAGALGCFGMSRREALWAAGAAATGRPDRLPGVGSSSHIPALPGMSELELAAADVWATG 957 ATAGA GCFGMSRREALWAAGAAAT RPDRLPGVGSSSHIPALPGMSELELAAADVWATG Sbjct 912 ATAGAFGCFGMSRREALWAAGAAATQRPDRLPGVGSSSHIPALPGMSELELAAADVWATG 971 Query 958 VSPDSYPTQFLRADLDAMGVLPAERLGSVSDGDRVLIAGAVTHRQRPATAQGVTFINLED 1017 +SPDSYPTQFLR DLDAMGV+PA RLGSV DGDRVLIAGAVTHRQRP TAQGVTF+NLED Sbjct 972 ISPDSYPTQFLRDDLDAMGVVPAARLGSVPDGDRVLIAGAVTHRQRPGTAQGVTFLNLED 1031 Query 1018 ETGMVNVLCTPGVWARHRKLAHTAPALLIRGQVQNASGAITVVAERMGRLTLAVGARSRD 1077 ETGMVNVLCTPGVWARHRKLA+TAPALL+RGQVQNASGAITVVAER+GR+TLAVG+RSRD Sbjct 1032 ETGMVNVLCTPGVWARHRKLANTAPALLVRGQVQNASGAITVVAERLGRITLAVGSRSRD 1091 Query 1078 FR 1079 FR Sbjct 1092 FR 1093 >gi|342861583|ref|ZP_08718230.1| error-prone DNA polymerase [Mycobacterium colombiense CECT 3035] gi|342131072|gb|EGT84361.1| error-prone DNA polymerase [Mycobacterium colombiense CECT 3035] Length=1107 Score = 1891 bits (4898), Expect = 0.0, Method: Compositional matrix adjust. Identities = 962/1096 (88%), Positives = 1005/1096 (92%), Gaps = 18/1096 (1%) Query 1 MERVLNGKPRHAGVPAFDADGDVPRSRKRGAYQPPGRERVG-SSVAYAELHAHSAYSFLD 59 MERVL+ KPRHAG A + D P SR+R YQPP R SSVAYAELHAHSA+SFLD Sbjct 13 MERVLDSKPRHAGESA-GPESDGPLSRRRATYQPPDGGRASRSSVAYAELHAHSAFSFLD 71 Query 60 GASTPEELVEEAARLGLCALALTDHDGLYGAVRFAEAAAELDVRTVFGAELSLG------ 113 GASTPEELVEEAARL L ALALTDHDGLYGAVRFAEAAAELD+RTVFGAELSLG Sbjct 72 GASTPEELVEEAARLDLRALALTDHDGLYGAVRFAEAAAELDMRTVFGAELSLGPQSREG 131 Query 114 ----ATARTERPDPPGPHLLVLARGPEGYRRLSRQLAAAHLAGGEKGKPRYDFDALTEAA 169 A+ARTE PDPPGPHLLVLARG EGYRRLSRQLAAAHLAGGEKGKPRYDFDALTEAA Sbjct 132 GDIGASARTEAPDPPGPHLLVLARGAEGYRRLSRQLAAAHLAGGEKGKPRYDFDALTEAA 191 Query 170 GGHWHILTGCRKGHVRQALSQGGPAAAQRALADLVDRFTPSRVSIELTHHGHPLDDERNA 229 GGHWHILTGCRKGHVRQALS GPAAA+RALADLVDRF RVSIELTHHG PLDDERNA Sbjct 192 GGHWHILTGCRKGHVRQALSDSGPAAAERALADLVDRFGAQRVSIELTHHGQPLDDERNA 251 Query 230 ALAGLAPRFGVGIVATTGAHFADPSRGRLAMAMAAIRARRSLDSAAGWLAPLGGAHLRSG 289 ALA LAPRFGVG+VATTGAHFA PSR RLAMAM AIRAR+SLD+AAGWLAPLGG+HLRSG Sbjct 252 ALAALAPRFGVGVVATTGAHFAGPSRRRLAMAMGAIRARQSLDAAAGWLAPLGGSHLRSG 311 Query 290 EEMARLFAWCP----EAVTAAAELGERCAFGLQLIAPRLPPFDVPDGHTEDSWLRSLVMA 345 EEMARLF + VTAAAELGE+CAFGL LIAP+LPPFDVP GHTEDSWLR L MA Sbjct 312 EEMARLFGPVHLGGRDVVTAAAELGEQCAFGLALIAPQLPPFDVPAGHTEDSWLRQLTMA 371 Query 346 GARERYGPPKSAPRAYSQIEHELKVIAQLRFPGYFLVVHDITRFCRDNDILCQGRGSAAN 405 GAR+RYG + APRAY+QIEHELKVIA L FPGYFLVVHDI RFCRDN+ILCQGRGSAAN Sbjct 372 GARDRYGSAEHAPRAYAQIEHELKVIAHLTFPGYFLVVHDIARFCRDNNILCQGRGSAAN 431 Query 406 SAVCYALGVTAVDPVANELLFERFLSPARDGPPDIDIDIESDQREKVIQYVYHKYGRDYA 465 SAVCYALGVTAVDPVANELLFERFLSPARDGPPDID+DIESDQREKVIQYVY KYGRDYA Sbjct 432 SAVCYALGVTAVDPVANELLFERFLSPARDGPPDIDMDIESDQREKVIQYVYDKYGRDYA 491 Query 466 AQVANVITYRGRSAVRDMARALGFSPGQQDAWSKQVSHWTGQAD--DVDGIPEQVIDLAT 523 AQVANVITYRG+ AVRDMARALGFS GQQDAWSKQ+SHW G AD DV+GIPE V+DLA Sbjct 492 AQVANVITYRGKIAVRDMARALGFSQGQQDAWSKQISHWNGLADSPDVEGIPEPVVDLAN 551 Query 524 QIRNLPRHLGIHSGGMVICDRPIADVCPVEWARMANRSVLQWDKDDCAAIGLVKFDLLGL 583 QIRNLPRH+GIHSGGMVICDRPIADVCPVEWARM NRSVLQWDKDDCAAIGLVKFDLLGL Sbjct 552 QIRNLPRHMGIHSGGMVICDRPIADVCPVEWARMENRSVLQWDKDDCAAIGLVKFDLLGL 611 Query 584 GMLSALHYAKDLVAEHKGIEVDLARLDLSEPAVYEMLARADSVGVFQVESRAQMATLPRL 643 GMLSALHYA DLVAEHKGIEVDLARLDLSEPAVYEMLARADSVGVFQVESRAQMATLPRL Sbjct 612 GMLSALHYAIDLVAEHKGIEVDLARLDLSEPAVYEMLARADSVGVFQVESRAQMATLPRL 671 Query 644 KPRVFYDLVVEVALIRPGPIQGGSVHPYIRRRNGVDPVIYEHPSMAPALRKTLGVPLFQE 703 KPRVFYDLVVEVALIRPGPIQGGSVHPYIRRRNG+DPV+Y+HPSM PALRKTLGVPLFQE Sbjct 672 KPRVFYDLVVEVALIRPGPIQGGSVHPYIRRRNGLDPVVYDHPSMEPALRKTLGVPLFQE 731 Query 704 QLMQLAVDCAGFSAAEADQLRRAMGSKRSTERMRRLRGRFYDGMRALHGAPDEVIDRIYE 763 QLMQLAVDCAGFSAAEADQLRRAMGSKRSTERMRRLRGRFYDGMRALHGA DEVIDR YE Sbjct 732 QLMQLAVDCAGFSAAEADQLRRAMGSKRSTERMRRLRGRFYDGMRALHGADDEVIDRTYE 791 Query 764 KLEAFANFGFPESHALSFASLVFYSAWFKLHHPAAFCAALLRAQPMGFYSPQSLVADARR 823 KLEAFANFGFPESHALSFASLVFYS+WFKLHHPAAFCAALLRAQPMGFYSPQSLVADARR Sbjct 792 KLEAFANFGFPESHALSFASLVFYSSWFKLHHPAAFCAALLRAQPMGFYSPQSLVADARR 851 Query 824 HGVAVHGPCVNASLAHATCENAGTEVRLGLGAVRYLGAELAEKLVAERTANGPFTSLPDL 883 HGV VHGP VNASLAHAT ENAGTEVRLGLGAVR++G +LAE+LV ER ANGPF SL DL Sbjct 852 HGVTVHGPDVNASLAHATLENAGTEVRLGLGAVRHIGDDLAEQLVDERKANGPFASLLDL 911 Query 884 TSRVQLSVPQVEALATAGALGCFGMSRREALWAAGAAATGRPDRLPGVGSSSHIPALPGM 943 T+R+QLSVPQ EALATAGALGCFGM RREALWAAGAAAT RP RLPGVGSSSH+PALPGM Sbjct 912 TTRLQLSVPQTEALATAGALGCFGMPRREALWAAGAAATQRPGRLPGVGSSSHVPALPGM 971 Query 944 SELELAAADVWATGVSPDSYPTQFLRADLDAMGVLPAERLGSVSDGDRVLIAGAVTHRQR 1003 SELELAAADVWATGVSPDSYPTQFLRADLDAMGV+PA LGSV DGDRVLIAGAVTHRQR Sbjct 972 SELELAAADVWATGVSPDSYPTQFLRADLDAMGVVPAAGLGSVPDGDRVLIAGAVTHRQR 1031 Query 1004 PATAQGVTFINLEDETGMVNVLCTPGVWARHRKLAHTAPALLIRGQVQNASGAITVVAER 1063 P TAQGVTFINLEDETGMVNVLC PGVWARHRKLA++APALL+RGQVQNASGAITVVAER Sbjct 1032 PGTAQGVTFINLEDETGMVNVLCAPGVWARHRKLANSAPALLVRGQVQNASGAITVVAER 1091 Query 1064 MGRLTLAVGARSRDFR 1079 +GR+TLAVG++SRDFR Sbjct 1092 LGRITLAVGSKSRDFR 1107 >gi|126433813|ref|YP_001069504.1| error-prone DNA polymerase [Mycobacterium sp. JLS] gi|126233613|gb|ABN97013.1| error-prone DNA polymerase, DnaE-like protein [Mycobacterium sp. JLS] Length=1099 Score = 1809 bits (4685), Expect = 0.0, Method: Compositional matrix adjust. Identities = 901/1089 (83%), Positives = 983/1089 (91%), Gaps = 11/1089 (1%) Query 1 MERVLNGKPRHAGV----PAFDADGDVPR-SRKRGAYQPPGRERVGSSVAYAELHAHSAY 55 +ERVLNGKPR AG P D GD P SRKRGAYQ P R G +V YAELHAHSAY Sbjct 12 IERVLNGKPRRAGESLREPPGDG-GDSPAWSRKRGAYQAPQLPRSGGAVPYAELHAHSAY 70 Query 56 SFLDGASTPEELVEEAARLGLCALALTDHDGLYGAVRFAEAAAELDVRTVFGAELSLGA- 114 SFLDGA TPEELVEEAARL L A+ALTDHDGLYG VRFAEAA ELD+RTVFGAELSLG Sbjct 71 SFLDGAGTPEELVEEAARLDLRAIALTDHDGLYGVVRFAEAARELDMRTVFGAELSLGMG 130 Query 115 --TARTERPDPPGPHLLVLARGPEGYRRLSRQLAAAHLAGGEKGKPRYDFDALTEAAGGH 172 +AR E PDPPGPHLLVLARGPEGYRRLSR++A AHLAGGEKGKPRYD+DALTEAAGGH Sbjct 131 ARSARNEVPDPPGPHLLVLARGPEGYRRLSREIAKAHLAGGEKGKPRYDYDALTEAAGGH 190 Query 173 WHILTGCRKGHVRQALSQGGPAAAQRALADLVDRFTPSRVSIELTHHGHPLDDERNAALA 232 WHILTGCRKGHVRQALS+GGPAAA++ALADLVDRF RVS+ELTHHGHPLDDERNAALA Sbjct 191 WHILTGCRKGHVRQALSEGGPAAAEKALADLVDRFGRDRVSVELTHHGHPLDDERNAALA 250 Query 233 GLAPRFGVGIVATTGAHFADPSRGRLAMAMAAIRARRSLDSAAGWLAPLGGAHLRSGEEM 292 LAPRFG+ +VATT AHFA+PSRGRLAMAM AIRAR S+D AAG+LAPLGG+HLRSGEEM Sbjct 251 ELAPRFGLTVVATTAAHFAEPSRGRLAMAMGAIRARHSIDEAAGYLAPLGGSHLRSGEEM 310 Query 293 ARLFAWCPEAVTAAAELGERCAFGLQLIAPRLPPFDVPDGHTEDSWLRSLVMAGARERYG 352 ARLFA CP+ VTAAA+LGE+CAFGL LIAP+LPPFDVP GHTEDSWLR LVM GAR RYG Sbjct 311 ARLFAHCPQVVTAAADLGEQCAFGLALIAPKLPPFDVPAGHTEDSWLRHLVMLGARNRYG 370 Query 353 PPKSAPRAYSQIEHELKVIAQLRFPGYFLVVHDITRFCRDNDILCQGRGSAANSAVCYAL 412 PP+ AP+AY+QIEHEL+VI +L FPGYFLVVHDITRFC++N IL QGRGSAANSAVCYAL Sbjct 371 PPERAPQAYAQIEHELRVIEKLSFPGYFLVVHDITRFCKENGILAQGRGSAANSAVCYAL 430 Query 413 GVTAVDPVANELLFERFLSPARDGPPDIDIDIESDQREKVIQYVYHKYGRDYAAQVANVI 472 GVT VDPVANELLFERFLSPARDGPPDIDIDIESD RE+ IQYVY +YGRDYAAQVANVI Sbjct 431 GVTNVDPVANELLFERFLSPARDGPPDIDIDIESDLREQAIQYVYDRYGRDYAAQVANVI 490 Query 473 TYRGRSAVRDMARALGFSPGQQDAWSKQVSHWTGQAD--DVDGIPEQVIDLATQIRNLPR 530 TYRGRSA+RDMARALGFS GQQDAWSKQ+S W G AD D++GIPE V+DLA QI NLPR Sbjct 491 TYRGRSAIRDMARALGFSQGQQDAWSKQLSKWNGLADSPDIEGIPEPVVDLALQISNLPR 550 Query 531 HLGIHSGGMVICDRPIADVCPVEWARMANRSVLQWDKDDCAAIGLVKFDLLGLGMLSALH 590 H+GIHSGGMVICDRPIADVCPVEWARMANRSVLQWDKDDCAAIGLVKFD+LGLGMLSALH Sbjct 551 HMGIHSGGMVICDRPIADVCPVEWARMANRSVLQWDKDDCAAIGLVKFDMLGLGMLSALH 610 Query 591 YAKDLVAEHKGIEVDLARLDLSEPAVYEMLARADSVGVFQVESRAQMATLPRLKPRVFYD 650 Y DLV EHKG++VDLA+LDLSEPAVYEML RADSVGVFQVESRAQMATLPRLKPRVFYD Sbjct 611 YCIDLVREHKGLDVDLAKLDLSEPAVYEMLQRADSVGVFQVESRAQMATLPRLKPRVFYD 670 Query 651 LVVEVALIRPGPIQGGSVHPYIRRRNGVDPVIYEHPSMAPALRKTLGVPLFQEQLMQLAV 710 LVVEVALIRPGPIQGGSVHPYI+RRNG +PV Y+HPSMA ALRKTLGVPLFQEQLMQLAV Sbjct 671 LVVEVALIRPGPIQGGSVHPYIKRRNGEEPVTYDHPSMANALRKTLGVPLFQEQLMQLAV 730 Query 711 DCAGFSAAEADQLRRAMGSKRSTERMRRLRGRFYDGMRALHGAPDEVIDRIYEKLEAFAN 770 DCAGF+AAEADQLRRAMGSKRSTE+MRRLRGRFYDGMR HG EV DRIY+KLEAFAN Sbjct 731 DCAGFTAAEADQLRRAMGSKRSTEKMRRLRGRFYDGMRQRHGITGEVADRIYDKLEAFAN 790 Query 771 FGFPESHALSFASLVFYSAWFKLHHPAAFCAALLRAQPMGFYSPQSLVADARRHGVAVHG 830 FGFPESH+LSFASLVFYS+WFKLHHPAAFCAALLRAQPMGFYSPQSLVADARRHGV VHG Sbjct 791 FGFPESHSLSFASLVFYSSWFKLHHPAAFCAALLRAQPMGFYSPQSLVADARRHGVTVHG 850 Query 831 PCVNASLAHATCENAGTEVRLGLGAVRYLGAELAEKLVAERTANGPFTSLPDLTSRVQLS 890 P VNASLA+AT E+AGTEVRLGLGAVR++G +LAE++V ER ANGPF SL DLT RVQLS Sbjct 851 PDVNASLAYATLESAGTEVRLGLGAVRHIGDDLAERIVEERKANGPFESLLDLTGRVQLS 910 Query 891 VPQVEALATAGALGCFGMSRREALWAAGAAATGRPDRLPGVGSSSHIPALPGMSELELAA 950 VPQ EALATAGALGCFG++RRE LWAAGAAA RPDRLPGVGS+ +P+LPGMS+LELAA Sbjct 911 VPQTEALATAGALGCFGVTRREGLWAAGAAAAERPDRLPGVGSAGQVPSLPGMSKLELAA 970 Query 951 ADVWATGVSPDSYPTQFLRADLDAMGVLPAERLGSVSDGDRVLIAGAVTHRQRPATAQGV 1010 ADVWATGVSPDSYPTQFLR +LDAMGV+PA RL V DG RVL+AGAVTHRQRPATAQGV Sbjct 971 ADVWATGVSPDSYPTQFLRENLDAMGVIPAGRLLDVPDGTRVLVAGAVTHRQRPATAQGV 1030 Query 1011 TFINLEDETGMVNVLCTPGVWARHRKLAHTAPALLIRGQVQNASGAITVVAERMGRLTLA 1070 TF+NLEDETGMVNV+C+P +W+R R+LA TAPA++IRG VQNA+GA+TVVA+++G+L + Sbjct 1031 TFLNLEDETGMVNVVCSPQLWSRQRRLAQTAPAMVIRGIVQNATGAVTVVADKLGKLDMR 1090 Query 1071 VGARSRDFR 1079 VG++SRDFR Sbjct 1091 VGSKSRDFR 1099 >gi|108798154|ref|YP_638351.1| error-prone DNA polymerase [Mycobacterium sp. MCS] gi|119867250|ref|YP_937202.1| error-prone DNA polymerase [Mycobacterium sp. KMS] gi|108768573|gb|ABG07295.1| error-prone DNA polymerase, DnaE-like protein [Mycobacterium sp. MCS] gi|119693339|gb|ABL90412.1| error-prone DNA polymerase, DnaE-like protein [Mycobacterium sp. KMS] Length=1099 Score = 1807 bits (4681), Expect = 0.0, Method: Compositional matrix adjust. Identities = 900/1089 (83%), Positives = 982/1089 (91%), Gaps = 11/1089 (1%) Query 1 MERVLNGKPRHAGV----PAFDADGDVPR-SRKRGAYQPPGRERVGSSVAYAELHAHSAY 55 +ERVLNGKPR AG P D GD P SRKRGAYQ P R G +V YAELHAHSAY Sbjct 12 IERVLNGKPRRAGESLREPPGDG-GDSPAWSRKRGAYQAPQLPRSGGAVPYAELHAHSAY 70 Query 56 SFLDGASTPEELVEEAARLGLCALALTDHDGLYGAVRFAEAAAELDVRTVFGAELSLGA- 114 SFLDGA TPEELVEEAARL L A+ALTDHDGLYG VRFAEAA ELD+RTVFGAELSLG Sbjct 71 SFLDGAGTPEELVEEAARLDLRAIALTDHDGLYGVVRFAEAARELDMRTVFGAELSLGMG 130 Query 115 --TARTERPDPPGPHLLVLARGPEGYRRLSRQLAAAHLAGGEKGKPRYDFDALTEAAGGH 172 +AR E PDPPGPHLLVLARGPEGYRRLSR++A AHLAGGEKGKPRYD+D LTEAAGGH Sbjct 131 ARSARNEVPDPPGPHLLVLARGPEGYRRLSREIAKAHLAGGEKGKPRYDYDTLTEAAGGH 190 Query 173 WHILTGCRKGHVRQALSQGGPAAAQRALADLVDRFTPSRVSIELTHHGHPLDDERNAALA 232 WHILTGCRKGHVRQALS+GGPAAA++ALADLVDRF RVS+ELTHHGHPLDDERNAALA Sbjct 191 WHILTGCRKGHVRQALSEGGPAAAEKALADLVDRFGRDRVSVELTHHGHPLDDERNAALA 250 Query 233 GLAPRFGVGIVATTGAHFADPSRGRLAMAMAAIRARRSLDSAAGWLAPLGGAHLRSGEEM 292 LAPRFG+ +VATT AHFA+PSRGRLAMAM AIRAR S+D AAG+LAPLGG+HLRSGEEM Sbjct 251 ELAPRFGLTVVATTAAHFAEPSRGRLAMAMGAIRARHSIDEAAGYLAPLGGSHLRSGEEM 310 Query 293 ARLFAWCPEAVTAAAELGERCAFGLQLIAPRLPPFDVPDGHTEDSWLRSLVMAGARERYG 352 ARLFA CP+ VTAAA+LGE+CAFGL LIAP+LPPFDVP GHTEDSWLR LVM GAR RYG Sbjct 311 ARLFAHCPQVVTAAADLGEQCAFGLALIAPKLPPFDVPAGHTEDSWLRHLVMLGARNRYG 370 Query 353 PPKSAPRAYSQIEHELKVIAQLRFPGYFLVVHDITRFCRDNDILCQGRGSAANSAVCYAL 412 PP+ AP+AY+QIEHEL+VI +L FPGYFLVVHDITRFC++N IL QGRGSAANSAVCYAL Sbjct 371 PPERAPQAYAQIEHELRVIEKLSFPGYFLVVHDITRFCKENGILAQGRGSAANSAVCYAL 430 Query 413 GVTAVDPVANELLFERFLSPARDGPPDIDIDIESDQREKVIQYVYHKYGRDYAAQVANVI 472 GVT VDPVANELLFERFLSPARDGPPDIDIDIESD RE+ IQYVY +YGRDYAAQVANVI Sbjct 431 GVTNVDPVANELLFERFLSPARDGPPDIDIDIESDLREQAIQYVYDRYGRDYAAQVANVI 490 Query 473 TYRGRSAVRDMARALGFSPGQQDAWSKQVSHWTGQAD--DVDGIPEQVIDLATQIRNLPR 530 TYRGRSA+RDMARALGFS GQQDAWSKQ+S W G AD D++GIPE V+DLA QI NLPR Sbjct 491 TYRGRSAIRDMARALGFSQGQQDAWSKQLSKWNGLADSPDIEGIPEPVVDLALQISNLPR 550 Query 531 HLGIHSGGMVICDRPIADVCPVEWARMANRSVLQWDKDDCAAIGLVKFDLLGLGMLSALH 590 H+GIHSGGMVICDRPIADVCPVEWARMANRSVLQWDKDDCAAIGLVKFD+LGLGMLSALH Sbjct 551 HMGIHSGGMVICDRPIADVCPVEWARMANRSVLQWDKDDCAAIGLVKFDMLGLGMLSALH 610 Query 591 YAKDLVAEHKGIEVDLARLDLSEPAVYEMLARADSVGVFQVESRAQMATLPRLKPRVFYD 650 Y DLV EHKG++VDLA+LDLSEPAVYEML RADSVGVFQVESRAQMATLPRLKPRVFYD Sbjct 611 YCIDLVREHKGLDVDLAKLDLSEPAVYEMLQRADSVGVFQVESRAQMATLPRLKPRVFYD 670 Query 651 LVVEVALIRPGPIQGGSVHPYIRRRNGVDPVIYEHPSMAPALRKTLGVPLFQEQLMQLAV 710 LVVEVALIRPGPIQGGSVHPYI+RRNG +PV Y+HPSMA ALRKTLGVPLFQEQLMQLAV Sbjct 671 LVVEVALIRPGPIQGGSVHPYIKRRNGEEPVTYDHPSMANALRKTLGVPLFQEQLMQLAV 730 Query 711 DCAGFSAAEADQLRRAMGSKRSTERMRRLRGRFYDGMRALHGAPDEVIDRIYEKLEAFAN 770 DCAGF+AAEADQLRRAMGSKRSTE+MRRLRGRFYDGMR HG EV DRIY+KLEAFAN Sbjct 731 DCAGFTAAEADQLRRAMGSKRSTEKMRRLRGRFYDGMRQRHGITGEVADRIYDKLEAFAN 790 Query 771 FGFPESHALSFASLVFYSAWFKLHHPAAFCAALLRAQPMGFYSPQSLVADARRHGVAVHG 830 FGFPESH+LSFASLVFYS+WFKLHHPAAFCAALLRAQPMGFYSPQSLVADARRHGV VHG Sbjct 791 FGFPESHSLSFASLVFYSSWFKLHHPAAFCAALLRAQPMGFYSPQSLVADARRHGVTVHG 850 Query 831 PCVNASLAHATCENAGTEVRLGLGAVRYLGAELAEKLVAERTANGPFTSLPDLTSRVQLS 890 P VNASLA+AT E+AGTEVRLGLGAVR++G +LAE++V ER ANGPF SL DLT RVQLS Sbjct 851 PDVNASLAYATLESAGTEVRLGLGAVRHIGDDLAERIVEERKANGPFESLLDLTGRVQLS 910 Query 891 VPQVEALATAGALGCFGMSRREALWAAGAAATGRPDRLPGVGSSSHIPALPGMSELELAA 950 VPQ EALATAGALGCFG++RRE LWAAGAAA RPDRLPGVGS+ +P+LPGMS+LELAA Sbjct 911 VPQTEALATAGALGCFGVTRREGLWAAGAAAAERPDRLPGVGSAGQVPSLPGMSKLELAA 970 Query 951 ADVWATGVSPDSYPTQFLRADLDAMGVLPAERLGSVSDGDRVLIAGAVTHRQRPATAQGV 1010 ADVWATGVSPDSYPTQFLR +LDAMGV+PA RL V DG RVL+AGAVTHRQRPATAQGV Sbjct 971 ADVWATGVSPDSYPTQFLRENLDAMGVVPAGRLLDVPDGTRVLVAGAVTHRQRPATAQGV 1030 Query 1011 TFINLEDETGMVNVLCTPGVWARHRKLAHTAPALLIRGQVQNASGAITVVAERMGRLTLA 1070 TF+NLEDETGMVNV+C+P +W+R R+LA TAPA++IRG VQNA+GA+TVVA+++G+L + Sbjct 1031 TFLNLEDETGMVNVVCSPQLWSRQRRLAQTAPAMVIRGIVQNATGAVTVVADKLGKLDMR 1090 Query 1071 VGARSRDFR 1079 VG++SRDFR Sbjct 1091 VGSKSRDFR 1099 >gi|120402538|ref|YP_952367.1| error-prone DNA polymerase [Mycobacterium vanbaalenii PYR-1] gi|119955356|gb|ABM12361.1| error-prone DNA polymerase, DnaE-like protein [Mycobacterium vanbaalenii PYR-1] Length=1098 Score = 1794 bits (4646), Expect = 0.0, Method: Compositional matrix adjust. Identities = 901/1086 (83%), Positives = 965/1086 (89%), Gaps = 7/1086 (0%) Query 1 MERVLNGKPRHAGVP---AFDADGDVPR-SRKRGAYQ-PPGRERVGSSVAYAELHAHSAY 55 MERVL+GKPR AG P GD P SRKRG Y P G SS YAELHAHSAY Sbjct 13 MERVLSGKPRRAGWPIDQQIGDGGDSPAWSRKRGEYHAPEGPGAQESSTPYAELHAHSAY 72 Query 56 SFLDGASTPEELVEEAARLGLCALALTDHDGLYGAVRFAEAAAELDVRTVFGAELSLGAT 115 SFLDGASTPEELVEEAARL L A+ALTDHDGLYG VRFAEAA ELDV TVFGAELSLG Sbjct 73 SFLDGASTPEELVEEAARLNLRAIALTDHDGLYGVVRFAEAARELDVATVFGAELSLGGG 132 Query 116 ARTERPDPPGPHLLVLARGPEGYRRLSRQLAAAHLAGGEKGKPRYDFDALTEAAGGHWHI 175 RT+ PDPPGPHLLVLARGPEGYRRLSRQLAAAHLAGGEKG RYDFDALTEAAGGHW I Sbjct 133 TRTDVPDPPGPHLLVLARGPEGYRRLSRQLAAAHLAGGEKGVLRYDFDALTEAAGGHWQI 192 Query 176 LTGCRKGHVRQALSQGGPAAAQRALADLVDRFTPSRVSIELTHHGHPLDDERNAALAGLA 235 LTGCRKGHVRQALS GGP AA+ ALADLVDRF P RV++ELTHHGHPLDDERNAALA LA Sbjct 193 LTGCRKGHVRQALSTGGPEAAEAALADLVDRFGPDRVTVELTHHGHPLDDERNAALAALA 252 Query 236 PRFGVGIVATTGAHFADPSRGRLAMAMAAIRARRSLDSAAGWLAPLGGAHLRSGEEMARL 295 PRFG+G+VATT AHFA+P+RGRLAMAM AIRAR S+D AAG+LAPLGG+HLRSG+EMAR+ Sbjct 253 PRFGLGVVATTAAHFAEPARGRLAMAMGAIRARNSIDEAAGYLAPLGGSHLRSGDEMARM 312 Query 296 FAWCPEAVTAAAELGERCAFGLQLIAPRLPPFDVPDGHTEDSWLRSLVMAGARERYGPPK 355 FA CPE VTAAAELGE+CAFGL LIAP+LPPFDVPDGHTE SWLR LVM GARERYGPP+ Sbjct 313 FAHCPEVVTAAAELGEQCAFGLALIAPQLPPFDVPDGHTESSWLRHLVMQGARERYGPPE 372 Query 356 SAPRAYSQIEHELKVIAQLRFPGYFLVVHDITRFCRDNDILCQGRGSAANSAVCYALGVT 415 A RAY+QIEHEL VI QL FPGYFLVVHDITRFCRDN+IL QGRGSAANSAVCYAL VT Sbjct 373 RASRAYAQIEHELAVIEQLNFPGYFLVVHDITRFCRDNNILSQGRGSAANSAVCYALKVT 432 Query 416 AVDPVANELLFERFLSPARDGPPDIDIDIESDQREKVIQYVYHKYGRDYAAQVANVITYR 475 VDP+AN+LLFERFLSPARDGPPDIDIDIESD RE IQYVY +YGR+YAAQVANVITYR Sbjct 433 NVDPIANDLLFERFLSPARDGPPDIDIDIESDLRENAIQYVYQRYGREYAAQVANVITYR 492 Query 476 GRSAVRDMARALGFSPGQQDAWSKQVSHWTGQAD--DVDGIPEQVIDLATQIRNLPRHLG 533 GRSAVRDMARALGFS GQQDAWSKQVS W AD V+ IP V+DLA QI NLPRH+G Sbjct 493 GRSAVRDMARALGFSQGQQDAWSKQVSQWGNLADATHVEDIPGPVVDLAKQISNLPRHMG 552 Query 534 IHSGGMVICDRPIADVCPVEWARMANRSVLQWDKDDCAAIGLVKFDLLGLGMLSALHYAK 593 IHSGGMVICDRPIADVCPVEWARM NRSVLQWDKDDCAAIGLVKFDLLGLGMLSALHYA Sbjct 553 IHSGGMVICDRPIADVCPVEWARMENRSVLQWDKDDCAAIGLVKFDLLGLGMLSALHYAI 612 Query 594 DLVAEHKGIEVDLARLDLSEPAVYEMLARADSVGVFQVESRAQMATLPRLKPRVFYDLVV 653 DLVAEHKGIEVDLA+LDLSEPAVYEMLARADSVGVFQVESRAQMATLPRLKPR+FYDLVV Sbjct 613 DLVAEHKGIEVDLAKLDLSEPAVYEMLARADSVGVFQVESRAQMATLPRLKPRMFYDLVV 672 Query 654 EVALIRPGPIQGGSVHPYIRRRNGVDPVIYEHPSMAPALRKTLGVPLFQEQLMQLAVDCA 713 EVALIRPGPIQGGSVHPYI+RRNG + V Y+HPSM ALRKTLGVPLFQEQLMQLAVDCA Sbjct 673 EVALIRPGPIQGGSVHPYIKRRNGQEAVTYDHPSMESALRKTLGVPLFQEQLMQLAVDCA 732 Query 714 GFSAAEADQLRRAMGSKRSTERMRRLRGRFYDGMRALHGAPDEVIDRIYEKLEAFANFGF 773 GF+ AEADQLRRAMGSKRSTE+MRRLRGRF+DGM LHG +V RIYEKLEAFANFGF Sbjct 733 GFTPAEADQLRRAMGSKRSTEKMRRLRGRFFDGMAELHGVTGDVAQRIYEKLEAFANFGF 792 Query 774 PESHALSFASLVFYSAWFKLHHPAAFCAALLRAQPMGFYSPQSLVADARRHGVAVHGPCV 833 PESH+LSFASLVFYS+WFKLHHPAAFCAALLRAQPMGFYSPQSLVADARRHGV VHGP V Sbjct 793 PESHSLSFASLVFYSSWFKLHHPAAFCAALLRAQPMGFYSPQSLVADARRHGVVVHGPDV 852 Query 834 NASLAHATCENAGTEVRLGLGAVRYLGAELAEKLVAERTANGPFTSLPDLTSRVQLSVPQ 893 NA LAHAT EN G +VRLGLG VR++G ELAE+LV ER A+GPFTSL DLT RVQLSVPQ Sbjct 853 NAGLAHATLENHGLDVRLGLGGVRHIGDELAERLVGERKAHGPFTSLTDLTRRVQLSVPQ 912 Query 894 VEALATAGALGCFGMSRREALWAAGAAATGRPDRLPGVGSSSHIPALPGMSELELAAADV 953 EALATAGALGCFG++RRE LWAAGAAAT RPDRLPGVGSSSH+P+LPGM+ELEL ADV Sbjct 913 TEALATAGALGCFGITRREGLWAAGAAATERPDRLPGVGSSSHVPSLPGMTELELTVADV 972 Query 954 WATGVSPDSYPTQFLRADLDAMGVLPAERLGSVSDGDRVLIAGAVTHRQRPATAQGVTFI 1013 WATGVSPD YPT+FLR DLDAMGV+PA++L S+ DG RVL+AGAVTHRQRPATAQGVTF+ Sbjct 973 WATGVSPDRYPTEFLREDLDAMGVVPADQLLSLPDGTRVLVAGAVTHRQRPATAQGVTFM 1032 Query 1014 NLEDETGMVNVLCTPGVWARHRKLAHTAPALLIRGQVQNASGAITVVAERMGRLTLAVGA 1073 NLEDETGMVNVLC+ GVWARHRKLA TA AL++RG VQNA+GA+TVVA+RMGRL+L + Sbjct 1033 NLEDETGMVNVLCSQGVWARHRKLAQTASALVVRGIVQNATGAVTVVADRMGRLSLRAAS 1092 Query 1074 RSRDFR 1079 +SRDFR Sbjct 1093 KSRDFR 1098 >gi|315445823|ref|YP_004078702.1| DNA polymerase III subunit alpha [Mycobacterium sp. Spyr1] gi|315264126|gb|ADU00868.1| DNA polymerase III, alpha subunit [Mycobacterium sp. Spyr1] Length=1099 Score = 1789 bits (4634), Expect = 0.0, Method: Compositional matrix adjust. Identities = 891/1088 (82%), Positives = 965/1088 (89%), Gaps = 10/1088 (0%) Query 1 MERVLNGKPRHAGVPAFDAD----GDVPR-SRKRGAYQPPGRE--RVGSSVAYAELHAHS 53 M RVL GKPR AG P DA GD P S KRG Y+ P G S+ YAELHAHS Sbjct 13 MRRVLEGKPRRAGWP-IDAQVGDGGDSPAWSSKRGQYRAPESRGPATGRSMPYAELHAHS 71 Query 54 AYSFLDGASTPEELVEEAARLGLCALALTDHDGLYGAVRFAEAAAELDVRTVFGAELSLG 113 AYSFLDGASTPEELVEEA+RLGL ALALTDHDGLYG VRFAEAA ELDV TVFGAELSLG Sbjct 72 AYSFLDGASTPEELVEEASRLGLRALALTDHDGLYGVVRFAEAAKELDVDTVFGAELSLG 131 Query 114 ATARTERPDPPGPHLLVLARGPEGYRRLSRQLAAAHLAGGEKGKPRYDFDALTEAAGGHW 173 RT+ PDPPGPHLLVLARGPEGYRRLSRQLAAAHLAGGEKG RYDFDALTEAAGGHW Sbjct 132 GGTRTDVPDPPGPHLLVLARGPEGYRRLSRQLAAAHLAGGEKGVLRYDFDALTEAAGGHW 191 Query 174 HILTGCRKGHVRQALSQGGPAAAQRALADLVDRFTPSRVSIELTHHGHPLDDERNAALAG 233 ILTGCRKGHVRQAL +GG +AA+ ALADLVDRF RV++ELTHHGHPLDDERNAALA Sbjct 192 QILTGCRKGHVRQALLRGGDSAAEAALADLVDRFGRERVTVELTHHGHPLDDERNAALAA 251 Query 234 LAPRFGVGIVATTGAHFADPSRGRLAMAMAAIRARRSLDSAAGWLAPLGGAHLRSGEEMA 293 LAPRFG+ ++ATT AHFA+PSRGRLAMAM AIRAR S+D AAG+LAPLGG+HLRSGEEMA Sbjct 252 LAPRFGLTVIATTAAHFAEPSRGRLAMAMGAIRARNSIDEAAGYLAPLGGSHLRSGEEMA 311 Query 294 RLFAWCPEAVTAAAELGERCAFGLQLIAPRLPPFDVPDGHTEDSWLRSLVMAGARERYGP 353 R+FA CPE VTAAA+LGE+CAFGL LIAP+LPPF+VP GHTE+SWLR LVM GARERYGP Sbjct 312 RVFAHCPEVVTAAADLGEQCAFGLALIAPQLPPFEVPAGHTENSWLRHLVMQGARERYGP 371 Query 354 PKSAPRAYSQIEHELKVIAQLRFPGYFLVVHDITRFCRDNDILCQGRGSAANSAVCYALG 413 P+ A RAY+QIEHEL+VI QL FPGYFLVVHDITRFCR+N IL QGRGSAANSAVCYAL Sbjct 372 PERASRAYAQIEHELRVIEQLNFPGYFLVVHDITRFCRENAILSQGRGSAANSAVCYALK 431 Query 414 VTAVDPVANELLFERFLSPARDGPPDIDIDIESDQREKVIQYVYHKYGRDYAAQVANVIT 473 VT VDP+AN LLFERFLSPARDGPPDIDIDIESD REK IQYVY +YGR+YAAQVANVIT Sbjct 432 VTNVDPIANGLLFERFLSPARDGPPDIDIDIESDLREKAIQYVYERYGREYAAQVANVIT 491 Query 474 YRGRSAVRDMARALGFSPGQQDAWSKQVSHWTGQAD--DVDGIPEQVIDLATQIRNLPRH 531 YRGRSAVRDMARALGFS GQQDAWSKQ+S W AD V+ IPE VIDLA QI +LPRH Sbjct 492 YRGRSAVRDMARALGFSQGQQDAWSKQISQWGNLADATHVEDIPEPVIDLAMQISHLPRH 551 Query 532 LGIHSGGMVICDRPIADVCPVEWARMANRSVLQWDKDDCAAIGLVKFDLLGLGMLSALHY 591 +GIHSGGMVICDRPIADVCPVEWARM NRSVLQWDKDDCAAIGLVKFDLLGLGMLSALHY Sbjct 552 MGIHSGGMVICDRPIADVCPVEWARMENRSVLQWDKDDCAAIGLVKFDLLGLGMLSALHY 611 Query 592 AKDLVAEHKGIEVDLARLDLSEPAVYEMLARADSVGVFQVESRAQMATLPRLKPRVFYDL 651 A DLVAEHKG+EVDLA+LDLSEPAVYEML RADSVGVFQVESRAQMATLPRLKPRVFYDL Sbjct 612 AIDLVAEHKGLEVDLAKLDLSEPAVYEMLQRADSVGVFQVESRAQMATLPRLKPRVFYDL 671 Query 652 VVEVALIRPGPIQGGSVHPYIRRRNGVDPVIYEHPSMAPALRKTLGVPLFQEQLMQLAVD 711 VVEVALIRPGPIQGGSVHPYI+RRNG +PV YEHPSM ALRKTLGVPLFQEQLMQLAVD Sbjct 672 VVEVALIRPGPIQGGSVHPYIKRRNGQEPVTYEHPSMERALRKTLGVPLFQEQLMQLAVD 731 Query 712 CAGFSAAEADQLRRAMGSKRSTERMRRLRGRFYDGMRALHGAPDEVIDRIYEKLEAFANF 771 CAGFSAAEADQLRRAMGSKRSTE+MRRLRGRF++GM LHG +V RIYEKLEAFANF Sbjct 732 CAGFSAAEADQLRRAMGSKRSTEKMRRLRGRFFEGMAELHGISGDVARRIYEKLEAFANF 791 Query 772 GFPESHALSFASLVFYSAWFKLHHPAAFCAALLRAQPMGFYSPQSLVADARRHGVAVHGP 831 GFPESH+LSFASLVFYS+WFKLHHPAAFCAALLRAQPMGFYSPQ+LVADARRHGV VHGP Sbjct 792 GFPESHSLSFASLVFYSSWFKLHHPAAFCAALLRAQPMGFYSPQTLVADARRHGVDVHGP 851 Query 832 CVNASLAHATCENAGTEVRLGLGAVRYLGAELAEKLVAERTANGPFTSLPDLTSRVQLSV 891 VNASLAHAT EN G +VRLGLG++R++G ELA++LV +R NGPF SL DLT RVQL+V Sbjct 852 DVNASLAHATLENHGLDVRLGLGSIRHIGDELAQRLVEDRKLNGPFVSLTDLTRRVQLTV 911 Query 892 PQVEALATAGALGCFGMSRREALWAAGAAATGRPDRLPGVGSSSHIPALPGMSELELAAA 951 PQ EALATAGALGCFG++RRE LWAAGAAAT RPDRLPGVGSSS +P+LPGM+ELEL AA Sbjct 912 PQTEALATAGALGCFGITRREGLWAAGAAATERPDRLPGVGSSSQVPSLPGMTELELTAA 971 Query 952 DVWATGVSPDSYPTQFLRADLDAMGVLPAERLGSVSDGDRVLIAGAVTHRQRPATAQGVT 1011 DVWATGVSPD YPT+FLR DLDAMGV+PA+RL SV DG RVL+AGAVTHRQRPATAQGVT Sbjct 972 DVWATGVSPDRYPTEFLREDLDAMGVVPADRLLSVRDGTRVLVAGAVTHRQRPATAQGVT 1031 Query 1012 FINLEDETGMVNVLCTPGVWARHRKLAHTAPALLIRGQVQNASGAITVVAERMGRLTLAV 1071 F+NLEDETGMVNVLC+ G+WARHRKLA TA AL++RG VQNA+GA+TVVA+RMG + + V Sbjct 1032 FLNLEDETGMVNVLCSQGIWARHRKLAQTASALVVRGIVQNATGAVTVVADRMGPINMKV 1091 Query 1072 GARSRDFR 1079 ++SRDFR Sbjct 1092 ASKSRDFR 1099 >gi|145225469|ref|YP_001136147.1| error-prone DNA polymerase [Mycobacterium gilvum PYR-GCK] gi|145217955|gb|ABP47359.1| error-prone DNA polymerase, DnaE-like protein [Mycobacterium gilvum PYR-GCK] Length=1087 Score = 1789 bits (4633), Expect = 0.0, Method: Compositional matrix adjust. Identities = 890/1088 (82%), Positives = 965/1088 (89%), Gaps = 10/1088 (0%) Query 1 MERVLNGKPRHAGVPAFDAD----GDVPR-SRKRGAYQPPGRE--RVGSSVAYAELHAHS 53 M RVL GKPR AG P DA GD P S KRG Y+ P G S+ YAELHAHS Sbjct 1 MRRVLEGKPRRAGWP-IDAQVGDGGDSPAWSSKRGQYRAPESRGPATGRSMPYAELHAHS 59 Query 54 AYSFLDGASTPEELVEEAARLGLCALALTDHDGLYGAVRFAEAAAELDVRTVFGAELSLG 113 AYSFLDGASTPEELVEEA+RLGL ALALTDHDGLYG VRFAEAA ELDV TVFGAELSLG Sbjct 60 AYSFLDGASTPEELVEEASRLGLRALALTDHDGLYGVVRFAEAAKELDVDTVFGAELSLG 119 Query 114 ATARTERPDPPGPHLLVLARGPEGYRRLSRQLAAAHLAGGEKGKPRYDFDALTEAAGGHW 173 RT+ PDPPGPHLLVLARGPEGYRRLSRQLAAAHLAGGEKG RYDFDALTEAAGGHW Sbjct 120 GGTRTDVPDPPGPHLLVLARGPEGYRRLSRQLAAAHLAGGEKGVLRYDFDALTEAAGGHW 179 Query 174 HILTGCRKGHVRQALSQGGPAAAQRALADLVDRFTPSRVSIELTHHGHPLDDERNAALAG 233 ILTGCRKGHVRQAL +GG +AA+ ALADLVDRF RV++ELTHHGHPLDDERNAALA Sbjct 180 QILTGCRKGHVRQALLRGGDSAAEAALADLVDRFGRERVTVELTHHGHPLDDERNAALAA 239 Query 234 LAPRFGVGIVATTGAHFADPSRGRLAMAMAAIRARRSLDSAAGWLAPLGGAHLRSGEEMA 293 LAPRFG+ ++ATT AHFA+PSRGRLAMAM AIRAR S+D AAG+LAPLGG+HLRSGEEMA Sbjct 240 LAPRFGLTVIATTAAHFAEPSRGRLAMAMGAIRARNSIDEAAGYLAPLGGSHLRSGEEMA 299 Query 294 RLFAWCPEAVTAAAELGERCAFGLQLIAPRLPPFDVPDGHTEDSWLRSLVMAGARERYGP 353 R+FA CPE VTAAA+LGE+CAFGL LIAP+LPPF+VP GHTE+SWLR LVM GARERYGP Sbjct 300 RVFAHCPEVVTAAADLGEQCAFGLALIAPQLPPFEVPAGHTENSWLRHLVMQGARERYGP 359 Query 354 PKSAPRAYSQIEHELKVIAQLRFPGYFLVVHDITRFCRDNDILCQGRGSAANSAVCYALG 413 P+ A RAY+QIEHEL+VI QL FPGYFLVVHDITRFCR+N IL QGRGSAANSAVCYAL Sbjct 360 PERASRAYAQIEHELRVIEQLNFPGYFLVVHDITRFCRENAILSQGRGSAANSAVCYALK 419 Query 414 VTAVDPVANELLFERFLSPARDGPPDIDIDIESDQREKVIQYVYHKYGRDYAAQVANVIT 473 VT VDP+AN LLFERFLSPARDGPPDIDIDIESD REK IQYVY +YGR+YAAQVANVIT Sbjct 420 VTNVDPIANGLLFERFLSPARDGPPDIDIDIESDLREKAIQYVYERYGREYAAQVANVIT 479 Query 474 YRGRSAVRDMARALGFSPGQQDAWSKQVSHWTGQAD--DVDGIPEQVIDLATQIRNLPRH 531 YRGRSAVRDMARALGFS GQQDAWSKQ+S W AD V+ IPE VIDLA QI +LPRH Sbjct 480 YRGRSAVRDMARALGFSQGQQDAWSKQISQWGNLADATHVEDIPEPVIDLAMQISHLPRH 539 Query 532 LGIHSGGMVICDRPIADVCPVEWARMANRSVLQWDKDDCAAIGLVKFDLLGLGMLSALHY 591 +GIHSGGMVICDRPIADVCPVEWARM NRSVLQWDKDDCAAIGLVKFDLLGLGMLSALHY Sbjct 540 MGIHSGGMVICDRPIADVCPVEWARMENRSVLQWDKDDCAAIGLVKFDLLGLGMLSALHY 599 Query 592 AKDLVAEHKGIEVDLARLDLSEPAVYEMLARADSVGVFQVESRAQMATLPRLKPRVFYDL 651 A DLVAEHKG+EVDLA+LDLSEPAVYEML RADSVGVFQVESRAQMATLPRLKPR+FYDL Sbjct 600 AIDLVAEHKGLEVDLAKLDLSEPAVYEMLQRADSVGVFQVESRAQMATLPRLKPRMFYDL 659 Query 652 VVEVALIRPGPIQGGSVHPYIRRRNGVDPVIYEHPSMAPALRKTLGVPLFQEQLMQLAVD 711 VVEVALIRPGPIQGGSVHPYI+RRNG +PV YEHPSM ALRKTLGVPLFQEQLMQLAVD Sbjct 660 VVEVALIRPGPIQGGSVHPYIKRRNGQEPVTYEHPSMERALRKTLGVPLFQEQLMQLAVD 719 Query 712 CAGFSAAEADQLRRAMGSKRSTERMRRLRGRFYDGMRALHGAPDEVIDRIYEKLEAFANF 771 CAGFSAAEADQLRRAMGSKRSTE+MRRLRGRF++GM LHG +V RIYEKLEAFANF Sbjct 720 CAGFSAAEADQLRRAMGSKRSTEKMRRLRGRFFEGMAELHGISGDVARRIYEKLEAFANF 779 Query 772 GFPESHALSFASLVFYSAWFKLHHPAAFCAALLRAQPMGFYSPQSLVADARRHGVAVHGP 831 GFPESH+LSFASLVFYS+WFKLHHPAAFCAALLRAQPMGFYSPQ+LVADARRHGV VHGP Sbjct 780 GFPESHSLSFASLVFYSSWFKLHHPAAFCAALLRAQPMGFYSPQTLVADARRHGVDVHGP 839 Query 832 CVNASLAHATCENAGTEVRLGLGAVRYLGAELAEKLVAERTANGPFTSLPDLTSRVQLSV 891 VNASLAHAT EN G +VRLGLG++R++G ELA++LV +R NGPF SL DLT RVQL+V Sbjct 840 DVNASLAHATLENHGLDVRLGLGSIRHIGDELAQRLVEDRKLNGPFVSLTDLTRRVQLTV 899 Query 892 PQVEALATAGALGCFGMSRREALWAAGAAATGRPDRLPGVGSSSHIPALPGMSELELAAA 951 PQ EALATAGALGCFG++RRE LWAAGAAAT RPDRLPGVGSSS +P+LPGM+ELEL AA Sbjct 900 PQTEALATAGALGCFGITRREGLWAAGAAATERPDRLPGVGSSSQVPSLPGMTELELTAA 959 Query 952 DVWATGVSPDSYPTQFLRADLDAMGVLPAERLGSVSDGDRVLIAGAVTHRQRPATAQGVT 1011 DVWATGVSPD YPT+FLR DLDAMGV+PA+RL SV DG RVL+AGAVTHRQRPATAQGVT Sbjct 960 DVWATGVSPDRYPTEFLREDLDAMGVVPADRLLSVRDGTRVLVAGAVTHRQRPATAQGVT 1019 Query 1012 FINLEDETGMVNVLCTPGVWARHRKLAHTAPALLIRGQVQNASGAITVVAERMGRLTLAV 1071 F+NLEDETGMVNVLC+ G+WARHRKLA TA AL++RG VQNA+GA+TVVA+RMG + + V Sbjct 1020 FLNLEDETGMVNVLCSQGIWARHRKLAQTASALVVRGIVQNATGAVTVVADRMGPINMKV 1079 Query 1072 GARSRDFR 1079 ++SRDFR Sbjct 1080 ASKSRDFR 1087 >gi|118471589|ref|YP_886009.1| error-prone DNA polymerase [Mycobacterium smegmatis str. MC2 155] gi|118172876|gb|ABK73772.1| DNA polymerase III, alpha subunit, putative [Mycobacterium smegmatis str. MC2 155] Length=1095 Score = 1770 bits (4585), Expect = 0.0, Method: Compositional matrix adjust. Identities = 895/1085 (83%), Positives = 969/1085 (90%), Gaps = 8/1085 (0%) Query 1 MERVLNGKPRHAGVPAFDAD--GDVPR-SRKRGAYQPPGRERV-GSSVAYAELHAHSAYS 56 MERVL KPR +G+P GD P SRKRGAY+PP + R+ S++ YAELHAHSAYS Sbjct 13 MERVLTSKPRRSGLPLESPGDGGDSPAWSRKRGAYEPPDQARMPASALPYAELHAHSAYS 72 Query 57 FLDGASTPEELVEEAARLGLCALALTDHDGLYGAVRFAEAAAELDVRTVFGAELSLGATA 116 FLDGASTPEELVEEAARL L A+ALTDHDGLYG VRFAEAA ELDV TVFGAELSL A Sbjct 73 FLDGASTPEELVEEAARLNLRAIALTDHDGLYGVVRFAEAARELDVATVFGAELSLSNVA 132 Query 117 RTERPDPPGPHLLVLARGPEGYRRLSRQLAAAHLAGGEKGKPRYDFDALTEAAGGHWHIL 176 RTE PDPPGPHLLVLARGPEGYRRLSR++A AHLAGGEKG+PRYDFD LTEAAGGHWHIL Sbjct 133 RTEDPDPPGPHLLVLARGPEGYRRLSREIAKAHLAGGEKGRPRYDFDQLTEAAGGHWHIL 192 Query 177 TGCRKGHVRQALSQGGPAAAQRALADLVDRFTPSRVSIELTHHGHPLDDERNAALAGLAP 236 TGCRKGHVRQALS GGP AA ALADLVDRF RVSIELTHHGHP DDERNAALA LAP Sbjct 193 TGCRKGHVRQALSDGGPDAAAAALADLVDRFGADRVSIELTHHGHPCDDERNAALAELAP 252 Query 237 RFGVGIVATTGAHFADPSRGRLAMAMAAIRARRSLDSAAGWLAPLGGAHLRSGEEMARLF 296 RFG+G+VATT AHFA PSRGRLAMAMAAIRAR S+D+AAGWLAPLGG HLRSGEEMARLF Sbjct 253 RFGLGVVATTAAHFATPSRGRLAMAMAAIRARNSIDTAAGWLAPLGGVHLRSGEEMARLF 312 Query 297 AWCPEAVTAAAELGERCAFGLQLIAPRLPPFDVPDGHTEDSWLRSLVMAGARERYGPPKS 356 PE V AAA+LGE+CAFGL LIAP+LPPFDVPDGHTEDSWLR L MAGA RYGPP+ Sbjct 313 D--PEFVAAAADLGEQCAFGLALIAPQLPPFDVPDGHTEDSWLRHLAMAGAARRYGPPER 370 Query 357 APRAYSQIEHELKVIAQLRFPGYFLVVHDITRFCRDNDILCQGRGSAANSAVCYALGVTA 416 AP+AY+QIEHEL++I QLRFPGYFLVVHDIT+FCRDN+ILCQGRGSAANSAVCYALGVT Sbjct 371 APKAYAQIEHELRIIEQLRFPGYFLVVHDITQFCRDNNILCQGRGSAANSAVCYALGVTN 430 Query 417 VDPVANELLFERFLSPARDGPPDIDIDIESDQREKVIQYVYHKYGRDYAAQVANVITYRG 476 VDP+AN+LLFERFLSPARDGPPDIDIDIESD RE VIQYVY +YGRDYAAQVANVITYRG Sbjct 431 VDPIANDLLFERFLSPARDGPPDIDIDIESDLRENVIQYVYERYGRDYAAQVANVITYRG 490 Query 477 RSAVRDMARALGFSPGQQDAWSKQVSHWTGQAD--DVDGIPEQVIDLATQIRNLPRHLGI 534 RSA+RDMARALGFS GQQDAWSK +S W G+ D DV IPEQVI+LA QI NLPRH+GI Sbjct 491 RSAIRDMARALGFSQGQQDAWSKHLSRWDGRPDSPDVAEIPEQVIELANQIANLPRHMGI 550 Query 535 HSGGMVICDRPIADVCPVEWARMANRSVLQWDKDDCAAIGLVKFDLLGLGMLSALHYAKD 594 HSGGMVICDRPIADVCPVEWARM NRSVLQWDKDDCAAIGLVKFD+LGLGMLSALHYA D Sbjct 551 HSGGMVICDRPIADVCPVEWARMENRSVLQWDKDDCAAIGLVKFDMLGLGMLSALHYAID 610 Query 595 LVAEHKGIEVDLARLDLSEPAVYEMLARADSVGVFQVESRAQMATLPRLKPRVFYDLVVE 654 LVAEHKGIEVDLA LDLSEPAVYEML RADSVGVFQVESRAQMATLPRLKPR FYDLVVE Sbjct 611 LVAEHKGIEVDLATLDLSEPAVYEMLQRADSVGVFQVESRAQMATLPRLKPREFYDLVVE 670 Query 655 VALIRPGPIQGGSVHPYIRRRNGVDPVIYEHPSMAPALRKTLGVPLFQEQLMQLAVDCAG 714 VALIRPGPIQGGSVHPYI+RRNG +PV Y+HPSM PAL+KTLGVPLFQEQLMQLAVDCAG Sbjct 671 VALIRPGPIQGGSVHPYIKRRNGQEPVTYDHPSMEPALKKTLGVPLFQEQLMQLAVDCAG 730 Query 715 FSAAEADQLRRAMGSKRSTERMRRLRGRFYDGMRALHGAPDEVIDRIYEKLEAFANFGFP 774 FSAAEADQLRRAMGSKRST +MRRLR RFYDGMR HG V DRIYEKLEAFANFGFP Sbjct 731 FSAAEADQLRRAMGSKRSTAKMRRLRSRFYDGMRERHGITGVVADRIYEKLEAFANFGFP 790 Query 775 ESHALSFASLVFYSAWFKLHHPAAFCAALLRAQPMGFYSPQSLVADARRHGVAVHGPCVN 834 ESH+LSFASLVFYS+WFKLHHPAAFCAALLRAQPMGFYSPQSLVADARRHGV VHGP VN Sbjct 791 ESHSLSFASLVFYSSWFKLHHPAAFCAALLRAQPMGFYSPQSLVADARRHGVTVHGPDVN 850 Query 835 ASLAHATCENAGTEVRLGLGAVRYLGAELAEKLVAERTANGPFTSLPDLTSRVQLSVPQV 894 ASLAHA EN G +VRLGLG+VR++G +LA+++V ER ANG FTSL DLTSRVQL+VPQ Sbjct 851 ASLAHAGLENRGLDVRLGLGSVRHIGDDLAQRIVDEREANGQFTSLLDLTSRVQLTVPQT 910 Query 895 EALATAGALGCFGMSRREALWAAGAAATGRPDRLPGVGSSSHIPALPGMSELELAAADVW 954 EALATAGALGCFG++RRE LWAAGAAAT RPDRLPGVGSS+HIP LPGMS LEL+AADVW Sbjct 911 EALATAGALGCFGITRREGLWAAGAAATQRPDRLPGVGSSTHIPPLPGMSALELSAADVW 970 Query 955 ATGVSPDSYPTQFLRADLDAMGVLPAERLGSVSDGDRVLIAGAVTHRQRPATAQGVTFIN 1014 ATG+SPDSYPT++LR LD++GV+P +RL V+DG R+L+AGAVTHRQRPATAQGVTFIN Sbjct 971 ATGISPDSYPTEYLRKHLDSLGVVPTDRLLDVADGTRILVAGAVTHRQRPATAQGVTFIN 1030 Query 1015 LEDETGMVNVLCTPGVWARHRKLAHTAPALLIRGQVQNASGAITVVAERMGRLTLAVGAR 1074 LEDE GMVNVLC PGVW+R+RK+A TAPAL++RG VQNA+GA+TVVA+RM + L VG+R Sbjct 1031 LEDEKGMVNVLCAPGVWSRYRKVAQTAPALIVRGIVQNATGAVTVVADRMDAVNLRVGSR 1090 Query 1075 SRDFR 1079 SRDFR Sbjct 1091 SRDFR 1095 >gi|333991845|ref|YP_004524459.1| DNA polymerase III subunit alpha [Mycobacterium sp. JDM601] gi|333487813|gb|AEF37205.1| DNA polymerase III alpha chain DnaE2 [Mycobacterium sp. JDM601] Length=1094 Score = 1698 bits (4398), Expect = 0.0, Method: Compositional matrix adjust. Identities = 884/1092 (81%), Positives = 949/1092 (87%), Gaps = 23/1092 (2%) Query 1 MERVLNGKPRHA-GVPAFDADGDVPRSRKRGAYQPPGRERVGSSVAYAELHAHSAYSFLD 59 MERVL+GKPRH GV A R+ +P G +V YAELHAHSAYSFLD Sbjct 13 MERVLDGKPRHTRGVSA---------DREPTEPRPERPPPRGPTVPYAELHAHSAYSFLD 63 Query 60 GASTPEELVEEAARLGLCALALTDHDGLYGAVRFAEAAAEL-----DVRTVFGAELSLGA 114 GASTP+ELV EAARLGL A+ALTDH+GLYG VRFAEAAAEL ++ TV+GAELSLG Sbjct 64 GASTPQELVVEAARLGLRAIALTDHNGLYGVVRFAEAAAELAAAGQEIATVYGAELSLGP 123 Query 115 TARTERPDPPGPHLLVLARGPEGYRRLSRQLAAAHLAGGEKGKPRYDFDALTEAAGGHWH 174 ART+ PDPPGPHLLVLARGPEGYRRLSRQ+AAAHLAG EK +PR+D D LTEAA GHWH Sbjct 124 GARTDDPDPPGPHLLVLARGPEGYRRLSRQIAAAHLAG-EKDRPRFDLDVLTEAADGHWH 182 Query 175 ILTGCRKGHVRQALSQGGPAAAQRALADLVDRFTPSRVSIELTHHGHPLDDERNAALAGL 234 ILTGCRKGHVRQAL+ GGP AA ALADLVDRF +RVS+ELT HG P DDE NAALA L Sbjct 183 ILTGCRKGHVRQALAAGGPDAAATALADLVDRFGAARVSVELTRHGDPYDDEHNAALAAL 242 Query 235 APRFGVGIVATTGAHFADPSRGRLAMAMAAIRARRSLDSAAGWLAPLGGAHLRSGEEMAR 294 APRFGV +VATT AHFA PSR RLAMAM AIRAR+SLD+AAG LAPLGG+HLRSG EMAR Sbjct 243 APRFGVSVVATTAAHFAGPSRARLAMAMGAIRARQSLDAAAGRLAPLGGSHLRSGAEMAR 302 Query 295 LFAWCPEAVTAAAELGERCAFGLQLIAPRLPPFDVPDGHTEDSWLRSLVMAGARERYGPP 354 LFA P AV AAAELGERCAF L LIAPRLPPF VPDGHTEDSWLR L +AGA +RYGPP Sbjct 303 LFAAHPSAVPAAAELGERCAFPLALIAPRLPPFAVPDGHTEDSWLRRLALAGAEQRYGPP 362 Query 355 KSAPRAYSQIEHELKVIAQLRFPGYFLVVHDITRFCRDNDILCQGRGSAANSAVCYALGV 414 APRAY+QIE EL+VIAQL FPGYFLVVHDITRFCRD+DILCQGRGSAANSAVCYALGV Sbjct 363 SGAPRAYAQIERELEVIAQLGFPGYFLVVHDITRFCRDSDILCQGRGSAANSAVCYALGV 422 Query 415 TAVDPVANELLFERFLSPARDGPPDIDIDIESDQREKVIQYVYHKYGRDYAAQVANVITY 474 TAVDPVANELLFERFLSPARDGPPDIDIDIESD+RE+VIQYVY KYGRD+AAQVANVITY Sbjct 423 TAVDPVANELLFERFLSPARDGPPDIDIDIESDRREEVIQYVYDKYGRDHAAQVANVITY 482 Query 475 RGRSAVRDMARALGFSPGQQDAWSKQVSHW----TGQADDVDGIPEQVIDLATQIRNLPR 530 RGRSAVRDMARALG+SPGQQDAWSKQ+ W + D+ GIP VIDLATQI +LPR Sbjct 483 RGRSAVRDMARALGYSPGQQDAWSKQLGRWGSLHRAEDADIQGIPGPVIDLATQIADLPR 542 Query 531 HLGIHSGGMVICDRPIADVCPVEWARMANRSVLQWDKDDCAAIGLVKFDLLGLGMLSALH 590 HLGIHSGGMVICDRPIADVCPVEWARM RSVLQWDKDDCAAIGLVKFDLLGLGMLSALH Sbjct 543 HLGIHSGGMVICDRPIADVCPVEWARMPGRSVLQWDKDDCAAIGLVKFDLLGLGMLSALH 602 Query 591 YAKDLVAEHKGIEVDLARLDLSEPAVYEMLARADSVGVFQVESRAQMATLPRLKPRVFYD 650 YA DLVAEHKGIEVDLA +DLSEPAVYEMLARADSVGVFQVESRAQMATLPRL+PRVFYD Sbjct 603 YAIDLVAEHKGIEVDLAAIDLSEPAVYEMLARADSVGVFQVESRAQMATLPRLRPRVFYD 662 Query 651 LVVEVALIRPGPIQGGSVHPYIRRRNGVDPVIYEHPSMAPALRKTLGVPLFQEQLMQLAV 710 LVV+VALIRPGPIQGGSVHPYIRRRNGVDPV YEHP M ALRKTLG+PLFQEQLM LAV Sbjct 663 LVVQVALIRPGPIQGGSVHPYIRRRNGVDPVTYEHPCMERALRKTLGIPLFQEQLMTLAV 722 Query 711 DCAGFSAAEADQLRRAMGSKRSTERMRRLRGRFYDGMRALHGAPDEVIDRIYEKLEAFAN 770 DCAGF+A EADQLRRAMGSKRS ERMRRLR RFYDGM HG V RIYEKLEAFAN Sbjct 723 DCAGFTAGEADQLRRAMGSKRSPERMRRLRDRFYDGMAQCHGITGAVAMRIYEKLEAFAN 782 Query 771 FGFPESHALSFASLVFYSAWFKLHHPAAFCAALLRAQPMGFYSPQSLVADARRHGVAVHG 830 +GFPESHA+SFASLVFYS+WFKLHHPAAFCAALLRAQPMGFYSPQSLVADARRHGV VHG Sbjct 783 YGFPESHAMSFASLVFYSSWFKLHHPAAFCAALLRAQPMGFYSPQSLVADARRHGVVVHG 842 Query 831 PCVNASLAHATCENAGTEVRLGLGAVRYLGAELAEKLVAERTANGPFTSLPDLTSRVQLS 890 P VNASLAHAT E AG +VRLGLGAVR +G +LAE+LVA+R A+GPF S+ DLT+RVQLS Sbjct 843 PDVNASLAHATLEEAGLQVRLGLGAVRGIGVDLAERLVADRAAHGPFASMLDLTARVQLS 902 Query 891 VPQVEALATAGALGCFGMSRREALWAAGAAATGRPDRLPGVGSS---SHIPALPGMSELE 947 PQ EALATAGA G FGMSRREALWAAG+AA RPDRLPGVG S H P LPGMSE+E Sbjct 903 TPQAEALATAGAFGGFGMSRREALWAAGSAAGQRPDRLPGVGVSGCDGHTPELPGMSEIE 962 Query 948 LAAADVWATGVSPDSYPTQFLRADLDAMGVLPAERLGSVSDGDRVLIAGAVTHRQRPATA 1007 L+AADVWATGVSPDS+PTQFLRADLDA+GV+PA RL V DG RVL+AGAVTHRQRP+TA Sbjct 963 LSAADVWATGVSPDSFPTQFLRADLDAIGVIPATRLAGVPDGTRVLVAGAVTHRQRPSTA 1022 Query 1008 QGVTFINLEDETGMVNVLCTPGVWARHRKLAHTAPALLIRGQVQNASGAITVVAERMGRL 1067 +GVTF+NLEDETGMVNVLCTPGVW RHR+LA TA ALLIRG+VQNASGAITV+AER+G L Sbjct 1023 RGVTFVNLEDETGMVNVLCTPGVWTRHRRLAQTATALLIRGRVQNASGAITVLAERLGAL 1082 Query 1068 TLAVGARSRDFR 1079 LAVG+RSRDFR Sbjct 1083 ELAVGSRSRDFR 1094 >gi|254365986|ref|ZP_04982031.1| DNA polymerase III (alpha chain) dnaE2 (DNA nucleotidyltransferase) [Mycobacterium tuberculosis str. Haarlem] gi|134151499|gb|EBA43544.1| DNA polymerase III (alpha chain) dnaE2 (DNA nucleotidyltransferase) [Mycobacterium tuberculosis str. Haarlem] Length=1090 Score = 1666 bits (4314), Expect = 0.0, Method: Compositional matrix adjust. Identities = 845/845 (100%), Positives = 845/845 (100%), Gaps = 0/845 (0%) Query 235 APRFGVGIVATTGAHFADPSRGRLAMAMAAIRARRSLDSAAGWLAPLGGAHLRSGEEMAR 294 APRFGVGIVATTGAHFADPSRGRLAMAMAAIRARRSLDSAAGWLAPLGGAHLRSGEEMAR Sbjct 246 APRFGVGIVATTGAHFADPSRGRLAMAMAAIRARRSLDSAAGWLAPLGGAHLRSGEEMAR 305 Query 295 LFAWCPEAVTAAAELGERCAFGLQLIAPRLPPFDVPDGHTEDSWLRSLVMAGARERYGPP 354 LFAWCPEAVTAAAELGERCAFGLQLIAPRLPPFDVPDGHTEDSWLRSLVMAGARERYGPP Sbjct 306 LFAWCPEAVTAAAELGERCAFGLQLIAPRLPPFDVPDGHTEDSWLRSLVMAGARERYGPP 365 Query 355 KSAPRAYSQIEHELKVIAQLRFPGYFLVVHDITRFCRDNDILCQGRGSAANSAVCYALGV 414 KSAPRAYSQIEHELKVIAQLRFPGYFLVVHDITRFCRDNDILCQGRGSAANSAVCYALGV Sbjct 366 KSAPRAYSQIEHELKVIAQLRFPGYFLVVHDITRFCRDNDILCQGRGSAANSAVCYALGV 425 Query 415 TAVDPVANELLFERFLSPARDGPPDIDIDIESDQREKVIQYVYHKYGRDYAAQVANVITY 474 TAVDPVANELLFERFLSPARDGPPDIDIDIESDQREKVIQYVYHKYGRDYAAQVANVITY Sbjct 426 TAVDPVANELLFERFLSPARDGPPDIDIDIESDQREKVIQYVYHKYGRDYAAQVANVITY 485 Query 475 RGRSAVRDMARALGFSPGQQDAWSKQVSHWTGQADDVDGIPEQVIDLATQIRNLPRHLGI 534 RGRSAVRDMARALGFSPGQQDAWSKQVSHWTGQADDVDGIPEQVIDLATQIRNLPRHLGI Sbjct 486 RGRSAVRDMARALGFSPGQQDAWSKQVSHWTGQADDVDGIPEQVIDLATQIRNLPRHLGI 545 Query 535 HSGGMVICDRPIADVCPVEWARMANRSVLQWDKDDCAAIGLVKFDLLGLGMLSALHYAKD 594 HSGGMVICDRPIADVCPVEWARMANRSVLQWDKDDCAAIGLVKFDLLGLGMLSALHYAKD Sbjct 546 HSGGMVICDRPIADVCPVEWARMANRSVLQWDKDDCAAIGLVKFDLLGLGMLSALHYAKD 605 Query 595 LVAEHKGIEVDLARLDLSEPAVYEMLARADSVGVFQVESRAQMATLPRLKPRVFYDLVVE 654 LVAEHKGIEVDLARLDLSEPAVYEMLARADSVGVFQVESRAQMATLPRLKPRVFYDLVVE Sbjct 606 LVAEHKGIEVDLARLDLSEPAVYEMLARADSVGVFQVESRAQMATLPRLKPRVFYDLVVE 665 Query 655 VALIRPGPIQGGSVHPYIRRRNGVDPVIYEHPSMAPALRKTLGVPLFQEQLMQLAVDCAG 714 VALIRPGPIQGGSVHPYIRRRNGVDPVIYEHPSMAPALRKTLGVPLFQEQLMQLAVDCAG Sbjct 666 VALIRPGPIQGGSVHPYIRRRNGVDPVIYEHPSMAPALRKTLGVPLFQEQLMQLAVDCAG 725 Query 715 FSAAEADQLRRAMGSKRSTERMRRLRGRFYDGMRALHGAPDEVIDRIYEKLEAFANFGFP 774 FSAAEADQLRRAMGSKRSTERMRRLRGRFYDGMRALHGAPDEVIDRIYEKLEAFANFGFP Sbjct 726 FSAAEADQLRRAMGSKRSTERMRRLRGRFYDGMRALHGAPDEVIDRIYEKLEAFANFGFP 785 Query 775 ESHALSFASLVFYSAWFKLHHPAAFCAALLRAQPMGFYSPQSLVADARRHGVAVHGPCVN 834 ESHALSFASLVFYSAWFKLHHPAAFCAALLRAQPMGFYSPQSLVADARRHGVAVHGPCVN Sbjct 786 ESHALSFASLVFYSAWFKLHHPAAFCAALLRAQPMGFYSPQSLVADARRHGVAVHGPCVN 845 Query 835 ASLAHATCENAGTEVRLGLGAVRYLGAELAEKLVAERTANGPFTSLPDLTSRVQLSVPQV 894 ASLAHATCENAGTEVRLGLGAVRYLGAELAEKLVAERTANGPFTSLPDLTSRVQLSVPQV Sbjct 846 ASLAHATCENAGTEVRLGLGAVRYLGAELAEKLVAERTANGPFTSLPDLTSRVQLSVPQV 905 Query 895 EALATAGALGCFGMSRREALWAAGAAATGRPDRLPGVGSSSHIPALPGMSELELAAADVW 954 EALATAGALGCFGMSRREALWAAGAAATGRPDRLPGVGSSSHIPALPGMSELELAAADVW Sbjct 906 EALATAGALGCFGMSRREALWAAGAAATGRPDRLPGVGSSSHIPALPGMSELELAAADVW 965 Query 955 ATGVSPDSYPTQFLRADLDAMGVLPAERLGSVSDGDRVLIAGAVTHRQRPATAQGVTFIN 1014 ATGVSPDSYPTQFLRADLDAMGVLPAERLGSVSDGDRVLIAGAVTHRQRPATAQGVTFIN Sbjct 966 ATGVSPDSYPTQFLRADLDAMGVLPAERLGSVSDGDRVLIAGAVTHRQRPATAQGVTFIN 1025 Query 1015 LEDETGMVNVLCTPGVWARHRKLAHTAPALLIRGQVQNASGAITVVAERMGRLTLAVGAR 1074 LEDETGMVNVLCTPGVWARHRKLAHTAPALLIRGQVQNASGAITVVAERMGRLTLAVGAR Sbjct 1026 LEDETGMVNVLCTPGVWARHRKLAHTAPALLIRGQVQNASGAITVVAERMGRLTLAVGAR 1085 Query 1075 SRDFR 1079 SRDFR Sbjct 1086 SRDFR 1090 Score = 292 bits (747), Expect = 3e-76, Method: Compositional matrix adjust. Identities = 147/147 (100%), Positives = 147/147 (100%), Gaps = 0/147 (0%) Query 1 MERVLNGKPRHAGVPAFDADGDVPRSRKRGAYQPPGRERVGSSVAYAELHAHSAYSFLDG 60 MERVLNGKPRHAGVPAFDADGDVPRSRKRGAYQPPGRERVGSSVAYAELHAHSAYSFLDG Sbjct 13 MERVLNGKPRHAGVPAFDADGDVPRSRKRGAYQPPGRERVGSSVAYAELHAHSAYSFLDG 72 Query 61 ASTPEELVEEAARLGLCALALTDHDGLYGAVRFAEAAAELDVRTVFGAELSLGATARTER 120 ASTPEELVEEAARLGLCALALTDHDGLYGAVRFAEAAAELDVRTVFGAELSLGATARTER Sbjct 73 ASTPEELVEEAARLGLCALALTDHDGLYGAVRFAEAAAELDVRTVFGAELSLGATARTER 132 Query 121 PDPPGPHLLVLARGPEGYRRLSRQLAA 147 PDPPGPHLLVLARGPEGYRRLSRQLAA Sbjct 133 PDPPGPHLLVLARGPEGYRRLSRQLAA 159 >gi|312140803|ref|YP_004008139.1| DNA polymerase III alpha subunit dnae2 [Rhodococcus equi 103S] gi|311890142|emb|CBH49460.1| DNA polymerase III alpha subunit DnaE2 [Rhodococcus equi 103S] Length=1093 Score = 1632 bits (4227), Expect = 0.0, Method: Compositional matrix adjust. Identities = 840/1083 (78%), Positives = 923/1083 (86%), Gaps = 6/1083 (0%) Query 1 MERVLNGKPRHAGVPAFDADG-DVPR-SRKRGAYQPPGRER-VGSSVAYAELHAHSAYSF 57 MERVL+G+PRH F DG D P SRKRGAY G R VG++V YAELH HSA+SF Sbjct 13 MERVLSGRPRHES--QFPGDGGDSPAWSRKRGAYLADGAVRPVGATVPYAELHTHSAFSF 70 Query 58 LDGASTPEELVEEAARLGLCALALTDHDGLYGAVRFAEAAAELDVRTVFGAELSLGATAR 117 LDGAS PEELVEEA RLGL A+ALTDHDG+YG VRFAEAA EL +RTVFGAELSL AT R Sbjct 71 LDGASPPEELVEEAVRLGLDAIALTDHDGMYGVVRFAEAAKELGMRTVFGAELSLDATPR 130 Query 118 TERPDPPGPHLLVLARGPEGYRRLSRQLAAAHLAGGEKGKPRYDFDALTEAAGGHWHILT 177 T PDP G HLLVLARG EGYRRLSRQ+AAAHLAGGEKGKPRYD+DALTEAAGGHW ILT Sbjct 131 TGTPDPGGTHLLVLARGQEGYRRLSRQIAAAHLAGGEKGKPRYDYDALTEAAGGHWQILT 190 Query 178 GCRKGHVRQALSQGGPAAAQRALADLVDRFTPSRVSIELTHHGHPLDDERNAALAGLAPR 237 GCRKGHVR AL+ GGP AA+ AL DLVDRF RV++ELTH G P DDE NAALA +A R Sbjct 191 GCRKGHVRSALAAGGPDAAEAALRDLVDRFGADRVTVELTHRGLPEDDEINAALAEIATR 250 Query 238 FGVGIVATTGAHFADPSRGRLAMAMAAIRARRSLDSAAGWLAPLGGAHLRSGEEMARLFA 297 + ++A+T AHFA P R RLAMAMAA+RAR+SLD AAGWLAP GGAHLRSG EMARLFA Sbjct 251 QQLPVIASTAAHFAGPPRRRLAMAMAAVRARQSLDEAAGWLAPTGGAHLRSGAEMARLFA 310 Query 298 WCPEAVTAAAELGERCAFGLQLIAPRLPPFDVPDGHTEDSWLRSLVMAGARERYGPPKSA 357 CPEAV AA LG CAF L+LIAP+LPPFDVPDGHTE SWLR L M GAR RYGPP + Sbjct 311 QCPEAVAGAAALGLECAFDLRLIAPKLPPFDVPDGHTEASWLRELTMQGARRRYGPPSAN 370 Query 358 PRAYSQIEHELKVIAQLRFPGYFLVVHDITRFCRDNDILCQGRGSAANSAVCYALGVTAV 417 P AY+QIEHEL +I +L FPGYFLVVHDI FC+DNDILCQGRGSAANSAVCYA+G+T V Sbjct 371 PAAYAQIEHELDIIERLTFPGYFLVVHDIVSFCKDNDILCQGRGSAANSAVCYAIGITNV 430 Query 418 DPVANELLFERFLSPARDGPPDIDIDIESDQREKVIQYVYHKYGRDYAAQVANVITYRGR 477 DPV N+LLFERFLSP RDGPPDID+DIESD+RE+ IQ+VY KYGR+YAAQVANVITYRG+ Sbjct 431 DPVRNKLLFERFLSPERDGPPDIDVDIESDRREEAIQHVYTKYGREYAAQVANVITYRGK 490 Query 478 SAVRDMARALGFSPGQQDAWSKQVSHWTGQADDVD-GIPEQVIDLATQIRNLPRHLGIHS 536 S+VRDMARALGFS GQQDAWSKQVS WTG + D IP V++LA QI PRHLGIHS Sbjct 491 SSVRDMARALGFSQGQQDAWSKQVSRWTGVGQETDTDIPPAVLELAAQIEGFPRHLGIHS 550 Query 537 GGMVICDRPIADVCPVEWARMANRSVLQWDKDDCAAIGLVKFDLLGLGMLSALHYAKDLV 596 GGMVICDRPIADVCPVEWARM NRSVLQWDKDDCAA+GLVKFDLLGLGMLSALHY DLV Sbjct 551 GGMVICDRPIADVCPVEWARMENRSVLQWDKDDCAAVGLVKFDLLGLGMLSALHYMIDLV 610 Query 597 AEHKGIEVDLARLDLSEPAVYEMLARADSVGVFQVESRAQMATLPRLKPRVFYDLVVEVA 656 AEHKGIEVDLA+LDLSE AVYEML RADSVGVFQVESRAQMATLPRLKPR FYDLVVEVA Sbjct 611 AEHKGIEVDLAQLDLSEQAVYEMLQRADSVGVFQVESRAQMATLPRLKPRNFYDLVVEVA 670 Query 657 LIRPGPIQGGSVHPYIRRRNGVDPVIYEHPSMAPALRKTLGVPLFQEQLMQLAVDCAGFS 716 LIRPGPIQGGSVHPYIRRRNG +PV+Y+HP + AL +TLGVPLFQEQLMQ+AVD AGFS Sbjct 671 LIRPGPIQGGSVHPYIRRRNGREPVVYDHPCLEKALARTLGVPLFQEQLMQMAVDAAGFS 730 Query 717 AAEADQLRRAMGSKRSTERMRRLRGRFYDGMRALHGAPDEVIDRIYEKLEAFANFGFPES 776 AAEADQLRRAMGSKRS E+M RLRGR YDGMR LHG +V DRIYEKL AFANFGFPES Sbjct 731 AAEADQLRRAMGSKRSPEKMERLRGRLYDGMRELHGITGDVADRIYEKLHAFANFGFPES 790 Query 777 HALSFASLVFYSAWFKLHHPAAFCAALLRAQPMGFYSPQSLVADARRHGVAVHGPCVNAS 836 H+ SFASLVFYS+WFKLHHPAAFCA LLRAQPMGFYSPQSLVADARRHGV VHG VNAS Sbjct 791 HSQSFASLVFYSSWFKLHHPAAFCAGLLRAQPMGFYSPQSLVADARRHGVRVHGADVNAS 850 Query 837 LAHATCENAGTEVRLGLGAVRYLGAELAEKLVAERTANGPFTSLPDLTSRVQLSVPQVEA 896 LAHAT E GTEVRLGLG VR +G LAE++VA R +GPF S+ DLT R+ L+ QVE+ Sbjct 851 LAHATLEACGTEVRLGLGEVRGIGDALAERIVAARAEDGPFRSILDLTGRIDLTTGQVES 910 Query 897 LATAGALGCFGMSRREALWAAGAAATGRPDRLPGVGSSSHIPALPGMSELELAAADVWAT 956 LATAGAL CFG+SRREALWAAGAAA RPDRLPG+G+S+ PALPGMS+LELAAADVWAT Sbjct 911 LATAGALSCFGLSRREALWAAGAAAGERPDRLPGMGASTRAPALPGMSDLELAAADVWAT 970 Query 957 GVSPDSYPTQFLRADLDAMGVLPAERLGSVSDGDRVLIAGAVTHRQRPATAQGVTFINLE 1016 GVSPDSYPT+FLR LDA+GVLPA RL V DGDRVL+ GAVTHRQRPATA GVTF+NLE Sbjct 971 GVSPDSYPTEFLRPQLDALGVLPASRLLDVPDGDRVLVGGAVTHRQRPATAAGVTFVNLE 1030 Query 1017 DETGMVNVLCTPGVWARHRKLAHTAPALLIRGQVQNASGAITVVAERMGRLTLAVGARSR 1076 DETGMVNV+C+ G+WAR+RKLA +APALL+RG+VQNA GA+TVVA+ + + L + +RSR Sbjct 1031 DETGMVNVVCSVGLWARYRKLATSAPALLVRGKVQNAEGAVTVVADHLQLMDLRMASRSR 1090 Query 1077 DFR 1079 DFR Sbjct 1091 DFR 1093 >gi|325675561|ref|ZP_08155245.1| error-prone DNA polymerase [Rhodococcus equi ATCC 33707] gi|325553532|gb|EGD23210.1| error-prone DNA polymerase [Rhodococcus equi ATCC 33707] Length=1115 Score = 1625 bits (4209), Expect = 0.0, Method: Compositional matrix adjust. Identities = 837/1083 (78%), Positives = 921/1083 (86%), Gaps = 6/1083 (0%) Query 1 MERVLNGKPRHAGVPAFDADG-DVPR-SRKRGAYQPPGRER-VGSSVAYAELHAHSAYSF 57 MERVL+G+PRH F DG D P SRKRGAY G R VG++V YAELH HSA+SF Sbjct 35 MERVLSGRPRHES--QFPGDGGDSPAWSRKRGAYLADGAVRPVGATVPYAELHTHSAFSF 92 Query 58 LDGASTPEELVEEAARLGLCALALTDHDGLYGAVRFAEAAAELDVRTVFGAELSLGATAR 117 LDGAS PEELVEEA RLGL A+ALTDHDG+YG VRFAEAA EL +RTVFGAELSL AT R Sbjct 93 LDGASPPEELVEEAVRLGLDAIALTDHDGMYGVVRFAEAAKELGMRTVFGAELSLDATPR 152 Query 118 TERPDPPGPHLLVLARGPEGYRRLSRQLAAAHLAGGEKGKPRYDFDALTEAAGGHWHILT 177 T PDP G HLLVLARG EGYRRLSRQ+AAAHLAGGEKGKPRYD+DALTEAAGGHW ILT Sbjct 153 TGTPDPGGTHLLVLARGQEGYRRLSRQIAAAHLAGGEKGKPRYDYDALTEAAGGHWQILT 212 Query 178 GCRKGHVRQALSQGGPAAAQRALADLVDRFTPSRVSIELTHHGHPLDDERNAALAGLAPR 237 GCRKGHVR AL+ GGP AA+ AL DLVDRF RV++ELTH G P DDE NAALA +A R Sbjct 213 GCRKGHVRSALAAGGPDAAEAALRDLVDRFGADRVTVELTHRGLPEDDEINAALAEIATR 272 Query 238 FGVGIVATTGAHFADPSRGRLAMAMAAIRARRSLDSAAGWLAPLGGAHLRSGEEMARLFA 297 + ++A+T AHFA P R RLAMAMAA+RAR+SLD AAGWLAP GGAHLRSG EM RLFA Sbjct 273 QQLPVIASTAAHFAGPHRRRLAMAMAAVRARQSLDEAAGWLAPTGGAHLRSGAEMVRLFA 332 Query 298 WCPEAVTAAAELGERCAFGLQLIAPRLPPFDVPDGHTEDSWLRSLVMAGARERYGPPKSA 357 CPEAV AA LG CAF L+LIAP+LPPFDVPDGHTE SWLR L M GAR RYGPP + Sbjct 333 QCPEAVAGAAALGLECAFDLRLIAPKLPPFDVPDGHTEASWLRELTMQGARRRYGPPSAN 392 Query 358 PRAYSQIEHELKVIAQLRFPGYFLVVHDITRFCRDNDILCQGRGSAANSAVCYALGVTAV 417 P AY+QIEHEL +I +L FPGYFLVVHDI FC+ NDILCQGRGSAANSAVCYA+G+T V Sbjct 393 PAAYAQIEHELDIIERLTFPGYFLVVHDIVSFCKGNDILCQGRGSAANSAVCYAIGITNV 452 Query 418 DPVANELLFERFLSPARDGPPDIDIDIESDQREKVIQYVYHKYGRDYAAQVANVITYRGR 477 DPV N+LLFERFLSP RDGPPDID+DIESD+RE+ IQ+VY KYGR+YAAQVANVITYRG+ Sbjct 453 DPVRNKLLFERFLSPERDGPPDIDVDIESDRREEAIQHVYTKYGREYAAQVANVITYRGK 512 Query 478 SAVRDMARALGFSPGQQDAWSKQVSHWTGQADDVD-GIPEQVIDLATQIRNLPRHLGIHS 536 S+VRDMARALGFS GQQDAWSKQVS WTG + D IP V++LA QI PRHLGIHS Sbjct 513 SSVRDMARALGFSQGQQDAWSKQVSRWTGVGQETDTDIPPAVLELAAQIEGFPRHLGIHS 572 Query 537 GGMVICDRPIADVCPVEWARMANRSVLQWDKDDCAAIGLVKFDLLGLGMLSALHYAKDLV 596 GGMVICDRPIADVCPVEWARM NRSVLQWDKDDCAA+GLVKFDLLGLGMLSALHY DLV Sbjct 573 GGMVICDRPIADVCPVEWARMENRSVLQWDKDDCAAVGLVKFDLLGLGMLSALHYMIDLV 632 Query 597 AEHKGIEVDLARLDLSEPAVYEMLARADSVGVFQVESRAQMATLPRLKPRVFYDLVVEVA 656 AEHKGIEVDLA+LDLSE AVYEML RADSVGVFQVESRAQMATLPRLKPR FYDLVVEVA Sbjct 633 AEHKGIEVDLAQLDLSEQAVYEMLQRADSVGVFQVESRAQMATLPRLKPRNFYDLVVEVA 692 Query 657 LIRPGPIQGGSVHPYIRRRNGVDPVIYEHPSMAPALRKTLGVPLFQEQLMQLAVDCAGFS 716 LIRPGPIQGGSVHPYIRRRNG +PV+Y+HP + AL +TLGVPLFQEQLMQ+AVD AGFS Sbjct 693 LIRPGPIQGGSVHPYIRRRNGREPVVYDHPCLEKALARTLGVPLFQEQLMQMAVDAAGFS 752 Query 717 AAEADQLRRAMGSKRSTERMRRLRGRFYDGMRALHGAPDEVIDRIYEKLEAFANFGFPES 776 AAEADQLRRAMGSKRS E+M RLRGR YDGMR LHG +V DRIYEKL AFANFGFPES Sbjct 753 AAEADQLRRAMGSKRSPEKMERLRGRLYDGMRELHGITGDVADRIYEKLHAFANFGFPES 812 Query 777 HALSFASLVFYSAWFKLHHPAAFCAALLRAQPMGFYSPQSLVADARRHGVAVHGPCVNAS 836 H+ SFASLVFYS+WFKLHHPAAFCA LLRAQPMGFYSPQSLVADARRHGV VHG VNAS Sbjct 813 HSQSFASLVFYSSWFKLHHPAAFCAGLLRAQPMGFYSPQSLVADARRHGVRVHGADVNAS 872 Query 837 LAHATCENAGTEVRLGLGAVRYLGAELAEKLVAERTANGPFTSLPDLTSRVQLSVPQVEA 896 LAHAT E GTEVRLGLG VR +G LA+++VA R +GPF S+ DLT R+ L+ QVE+ Sbjct 873 LAHATLEACGTEVRLGLGEVRGIGDALADRIVAARAEDGPFRSILDLTGRIDLTTGQVES 932 Query 897 LATAGALGCFGMSRREALWAAGAAATGRPDRLPGVGSSSHIPALPGMSELELAAADVWAT 956 LATAGAL CFG+SRREALWAAGAAA RPDRLPG+G+S+ PALPGMS+LELAAADVWAT Sbjct 933 LATAGALSCFGLSRREALWAAGAAAGERPDRLPGMGASTRAPALPGMSDLELAAADVWAT 992 Query 957 GVSPDSYPTQFLRADLDAMGVLPAERLGSVSDGDRVLIAGAVTHRQRPATAQGVTFINLE 1016 GVSPDSYPT+FLR LDA+GVLPA RL V DGDRVL+ GAVTHRQRPATA GVTF+NLE Sbjct 993 GVSPDSYPTEFLRPQLDALGVLPASRLLDVPDGDRVLVGGAVTHRQRPATAAGVTFVNLE 1052 Query 1017 DETGMVNVLCTPGVWARHRKLAHTAPALLIRGQVQNASGAITVVAERMGRLTLAVGARSR 1076 DETGMVNV+C+ G+WAR+RKLA +APALL+RG+VQNA GA+TVVA+ + + L + +RSR Sbjct 1053 DETGMVNVVCSVGLWARYRKLATSAPALLVRGKVQNAEGAVTVVADHLQLMDLRMASRSR 1112 Query 1077 DFR 1079 DFR Sbjct 1113 DFR 1115 >gi|169630782|ref|YP_001704431.1| error-prone DNA polymerase [Mycobacterium abscessus ATCC 19977] gi|169242749|emb|CAM63777.1| Error-prone DNA polymerase [Mycobacterium abscessus] Length=1078 Score = 1608 bits (4164), Expect = 0.0, Method: Compositional matrix adjust. Identities = 829/1067 (78%), Positives = 907/1067 (86%), Gaps = 12/1067 (1%) Query 21 GDVPR-SRKRGAYQPPGRERVGSSVAYAELHAHSAYSFLDGASTPEELVEEAARLGLCAL 79 GD P SRKR Y+PP RER S V YAELHAHSA+SFLDGAS PEE+V+EAARL L AL Sbjct 16 GDGPAWSRKRQPYEPPPRERGRSVVPYAELHAHSAFSFLDGASLPEEMVQEAARLDLKAL 75 Query 80 ALTDHDGLYGAVRFAEAAAELDVRTVFGAELSLGATARTERPDPPGPHLLVLARGPEGYR 139 A+TDHDG YG VRFAEAA EL + TVFGAELSLG TE HLLVLARG EGYR Sbjct 76 AITDHDGFYGVVRFAEAAKELGLPTVFGAELSLGGQGNTE----DSVHLLVLARGQEGYR 131 Query 140 RLSRQLAAAHLAGG----EKGKPRYDFDALTEAAGGHWHILTGCRKGHVRQALSQGGPAA 195 RLSRQ+A AHL+GG KGKPRYD DALTEAAGGHWHILTGCRKGHVR+AL+ GGP A Sbjct 132 RLSRQMAGAHLSGGTPKDRKGKPRYDLDALTEAAGGHWHILTGCRKGHVRRALAGGGPVA 191 Query 196 AQRALADLVDRFTPSRVSIELTHHGHPLDDERNAALAGLAPRFGVGIVATTGAHFADPSR 255 A+RALA+LVDRF RVSIEL HGHP +DERNA LA LA FGVG++ATT AHFA P Sbjct 192 AERALANLVDRFGADRVSIELNRHGHPGEDERNAELAALARGFGVGVIATTAAHFATPES 251 Query 256 GRLAMAMAAIRARRSLDSAAGWLAPLGGAHLRSGEEMARLFAWCPEAVTAAAELGERCAF 315 GRLAMAMAA+RAR+SLD AAGWL P+GGAHLRSG+EMARLF+ PE VTAAAELGE CAF Sbjct 252 GRLAMAMAAVRARKSLDDAAGWLDPVGGAHLRSGDEMARLFSHYPEVVTAAAELGEECAF 311 Query 316 GLQLIAPRLPPFDVPDGHTEDSWLRSLVMAGARERYGPPKSAPRAYSQIEHELKVIAQLR 375 L+LIAP+LPPFDVP GHTEDSWLR L + GA RYGP A +AY+QIE EL++IAQL Sbjct 312 DLRLIAPQLPPFDVPSGHTEDSWLRHLALEGAARRYGPRAGAQKAYAQIERELEIIAQLN 371 Query 376 FPGYFLVVHDITRFCRDNDILCQGRGSAANSAVCYALGVTAVDPVANELLFERFLSPARD 435 FPGYFLVVHDIT+FCR +DILCQGRGSAANSAVCYALGVT VDPV N LLFERFLSPARD Sbjct 372 FPGYFLVVHDITQFCRRSDILCQGRGSAANSAVCYALGVTNVDPVDNGLLFERFLSPARD 431 Query 436 GPPDIDIDIESDQREKVIQYVYHKYGRDYAAQVANVITYRGRSAVRDMARALGFSPGQQD 495 GPPDIDIDIESD+RE+ IQYVY+KYGR+YAAQVANVITYRGR AVRDMA+ALGF+ GQQD Sbjct 432 GPPDIDIDIESDEREQAIQYVYNKYGREYAAQVANVITYRGRMAVRDMAKALGFAQGQQD 491 Query 496 AWSKQVSHWTGQADD--VDGIPEQVIDLATQIRNLPRHLGIHSGGMVICDRPIADVCPVE 553 AWSKQ+ HW G AD VDGIP QVI LA QI++ PRH+GIHSGGMVICDRP+ADV PVE Sbjct 492 AWSKQMGHWGGLADAAAVDGIPPQVIQLARQIKDFPRHMGIHSGGMVICDRPLADVVPVE 551 Query 554 WARMANRSVLQWDKDDCAAIGLVKFDLLGLGMLSALHYAKDLVAEHKGIEVDLARLDLSE 613 WARM NRSVLQWDKDDCAA+GLVKFDLLGLGMLSALHY DLV EHKGI+VDLA ++L E Sbjct 552 WARMENRSVLQWDKDDCAAVGLVKFDLLGLGMLSALHYCIDLVREHKGIDVDLAHINLKE 611 Query 614 PAVYEMLARADSVGVFQVESRAQMATLPRLKPRVFYDLVVEVALIRPGPIQGGSVHPYIR 673 AVYEMLARADSVGVFQVESRAQMATLPRLKP+ FYDLVVEVALIRPGPIQGGSVHPYIR Sbjct 612 QAVYEMLARADSVGVFQVESRAQMATLPRLKPKCFYDLVVEVALIRPGPIQGGSVHPYIR 671 Query 674 RRNGVDP-VIYEHPSMAPALRKTLGVPLFQEQLMQLAVDCAGFSAAEADQLRRAMGSKRS 732 R N +D ++HPSMA AL KTLGVPLFQEQLMQLAVD AGFS AE+DQLRRAMGSKRS Sbjct 672 RYNKIDKDWQHDHPSMAAALDKTLGVPLFQEQLMQLAVDVAGFSPAESDQLRRAMGSKRS 731 Query 733 TERMRRLRGRFYDGMRALHGAPDEVIDRIYEKLEAFANFGFPESHALSFASLVFYSAWFK 792 ERM RLR RFY+GMR LHG E+ DRIYEKL AFANFGFPESHA SFASLVFYS+WFK Sbjct 732 PERMERLRNRFYEGMRNLHGITGELADRIYEKLYAFANFGFPESHAQSFASLVFYSSWFK 791 Query 793 LHHPAAFCAALLRAQPMGFYSPQSLVADARRHGVAVHGPCVNASLAHATCENAGTEVRLG 852 LHHPAAFCAALLRAQPMGFYSPQSLVADARRHGV VHGP VNASL++AT ENAG EVR+G Sbjct 792 LHHPAAFCAALLRAQPMGFYSPQSLVADARRHGVTVHGPDVNASLSYATLENAGLEVRIG 851 Query 853 LGAVRYLGAELAEKLVAERTANGPFTSLPDLTSRVQLSVPQVEALATAGALGCFGMSRRE 912 LGAVR++G +LA+ +V ER GPF SL DLT R+QL+ QVEALAT GALGCF MSRRE Sbjct 852 LGAVRHIGDDLAQAIVEERKVRGPFVSLLDLTGRIQLTTAQVEALATGGALGCFDMSRRE 911 Query 913 ALWAAGAAATGRPDRLPGVGSSSHIPALPGMSELELAAADVWATGVSPDSYPTQFLRADL 972 ALW AGAAA RPDRLPGVG SS IPALP M E+ AAADVWATGVSPDSYPTQFLRA L Sbjct 912 ALWVAGAAAAQRPDRLPGVGVSSRIPALPEMGEVTRAAADVWATGVSPDSYPTQFLRARL 971 Query 973 DAMGVLPAERLGSVSDGDRVLIAGAVTHRQRPATAQGVTFINLEDETGMVNVLCTPGVWA 1032 DAMGV+PA+ L V DG RVL+AGAVTHRQRPATA GVTFINLEDETGMVNV+C+ G+WA Sbjct 972 DAMGVVPAKGLFGVPDGSRVLVAGAVTHRQRPATAAGVTFINLEDETGMVNVVCSVGLWA 1031 Query 1033 RHRKLAHTAPALLIRGQVQNASGAITVVAERMGRLTLAVGARSRDFR 1079 R+RKLA TA AL+IRGQVQNASGA++VVA+++ L L + + SRDFR Sbjct 1032 RYRKLAVTARALIIRGQVQNASGAVSVVADQLRPLDLQIRSTSRDFR 1078 >gi|229489515|ref|ZP_04383378.1| DNA polymerase III, alpha subunit family [Rhodococcus erythropolis SK121] gi|229323612|gb|EEN89370.1| DNA polymerase III, alpha subunit family [Rhodococcus erythropolis SK121] Length=1072 Score = 1608 bits (4163), Expect = 0.0, Method: Compositional matrix adjust. Identities = 808/1066 (76%), Positives = 890/1066 (84%), Gaps = 3/1066 (0%) Query 17 FDADG-DVPR-SRKRGAYQPPGRERVGSSVAYAELHAHSAYSFLDGASTPEELVEEAARL 74 F DG D P SRKRG Y R V YAELHAHSA+SFLDGAS PEELVEEA RL Sbjct 7 FPGDGSDSPAWSRKRGEYHAGELTRGAGVVPYAELHAHSAFSFLDGASPPEELVEEAVRL 66 Query 75 GLCALALTDHDGLYGAVRFAEAAAELDVRTVFGAELSLGATARTERPDPPGPHLLVLARG 134 GL A+A+TDHDG YG VRFAEAA E +RTVFGAELSL + RT DP G HLLVLARG Sbjct 67 GLEAIAVTDHDGFYGVVRFAEAAREWGMRTVFGAELSLDSVPRTGTADPGGTHLLVLARG 126 Query 135 PEGYRRLSRQLAAAHLAGGEKGKPRYDFDALTEAAGGHWHILTGCRKGHVRQALSQGGPA 194 EGYRRLSR++AAAHLAGGEKGK +YD+D LTEAAGGHW ILTGCRKGHVRQAL+ GG Sbjct 127 QEGYRRLSREIAAAHLAGGEKGKLQYDYDVLTEAAGGHWQILTGCRKGHVRQALTSGGRE 186 Query 195 AAQRALADLVDRFTPSRVSIELTHHGHPLDDERNAALAGLAPRFGVGIVATTGAHFADPS 254 AA AL DLV+RF RVS+ELTHHG DDERNA LA LA G+ VATT AHFA P Sbjct 187 AAADALGDLVERFGAERVSVELTHHGLAEDDERNAVLAELAREHGLRTVATTAAHFAAPP 246 Query 255 RGRLAMAMAAIRARRSLDSAAGWLAPLGGAHLRSGEEMARLFAWCPEAVTAAAELGERCA 314 R RLAMAMAA+R+R+SLD AAGWLAP GGAHLRSG EMA LF+ PEAV+ AA+LG CA Sbjct 247 RRRLAMAMAAVRSRQSLDEAAGWLAPTGGAHLRSGAEMAALFSLYPEAVSGAADLGRECA 306 Query 315 FGLQLIAPRLPPFDVPDGHTEDSWLRSLVMAGARERYGPPKSAPRAYSQIEHELKVIAQL 374 F L+LIAP+LPPFDVP GHTE SWLR L M GA ERYGPP+ AP+AY Q+EHEL +I L Sbjct 307 FDLKLIAPKLPPFDVPAGHTEASWLRELTMVGALERYGPPEGAPKAYKQLEHELAIIEGL 366 Query 375 RFPGYFLVVHDITRFCRDNDILCQGRGSAANSAVCYALGVTAVDPVANELLFERFLSPAR 434 FPGYFLVVHDI FC++NDILCQGRGSAANSAVCYA+G+T VDPV N+LLFERFL+P R Sbjct 367 NFPGYFLVVHDIVSFCKNNDILCQGRGSAANSAVCYAIGITNVDPVRNKLLFERFLAPER 426 Query 435 DGPPDIDIDIESDQREKVIQYVYHKYGRDYAAQVANVITYRGRSAVRDMARALGFSPGQQ 494 DGPPDID+DIESD+RE+ IQ+VY KYGR YAAQVANVITYRG+S+VRDMARALGFS GQQ Sbjct 427 DGPPDIDVDIESDRREEAIQHVYAKYGRTYAAQVANVITYRGKSSVRDMARALGFSQGQQ 486 Query 495 DAWSKQVSHWTGQADDVD-GIPEQVIDLATQIRNLPRHLGIHSGGMVICDRPIADVCPVE 553 DAWSKQV W G + D IP V++LA QI PRHLGIHSGGMVICDRPIADVCPVE Sbjct 487 DAWSKQVGRWGGIDKNADTDIPRPVLELAAQIEGYPRHLGIHSGGMVICDRPIADVCPVE 546 Query 554 WARMANRSVLQWDKDDCAAIGLVKFDLLGLGMLSALHYAKDLVAEHKGIEVDLARLDLSE 613 WARMANRSVLQWDKDDCAA GLVKFDLLGLGMLSALHY DLVAEHKGI VDLA+LDLSE Sbjct 547 WARMANRSVLQWDKDDCAAAGLVKFDLLGLGMLSALHYMMDLVAEHKGITVDLAQLDLSE 606 Query 614 PAVYEMLARADSVGVFQVESRAQMATLPRLKPRVFYDLVVEVALIRPGPIQGGSVHPYIR 673 AVYEML RADSVGVFQVESRAQMATLPRLKPR FYDLVVEVALIRPGPIQGGSVHPYIR Sbjct 607 TAVYEMLQRADSVGVFQVESRAQMATLPRLKPRNFYDLVVEVALIRPGPIQGGSVHPYIR 666 Query 674 RRNGVDPVIYEHPSMAPALRKTLGVPLFQEQLMQLAVDCAGFSAAEADQLRRAMGSKRST 733 RRN ++PV Y+HPS+ AL +TLGVPLFQEQLMQ+AVD AGF+ +EADQLRRAMGSKRST Sbjct 667 RRNKLEPVSYDHPSLEKALERTLGVPLFQEQLMQMAVDVAGFTPSEADQLRRAMGSKRST 726 Query 734 ERMRRLRGRFYDGMRALHGAPDEVIDRIYEKLEAFANFGFPESHALSFASLVFYSAWFKL 793 E+M +LR RFY GMR LHG DEV DRIYEKL AFANFGFPESH+ SFA+LVFYS+WFKL Sbjct 727 EKMEQLRARFYQGMRDLHGIGDEVADRIYEKLYAFANFGFPESHSQSFAALVFYSSWFKL 786 Query 794 HHPAAFCAALLRAQPMGFYSPQSLVADARRHGVAVHGPCVNASLAHATCENAGTEVRLGL 853 HHPAAFCA LLRAQPMGFYSPQSLVADARRHGV VHG +N SLAHAT E G EVRLGL Sbjct 787 HHPAAFCAGLLRAQPMGFYSPQSLVADARRHGVQVHGADINVSLAHATVEAGGFEVRLGL 846 Query 854 GAVRYLGAELAEKLVAERTANGPFTSLPDLTSRVQLSVPQVEALATAGALGCFGMSRREA 913 G VR +G LAEK+V +R GPFTS DLT RV+L+ Q E+LATAGAL FG+SRREA Sbjct 847 GEVRNIGDALAEKIVEQRDLGGPFTSFLDLTGRVELTTAQAESLATAGALASFGISRREA 906 Query 914 LWAAGAAATGRPDRLPGVGSSSHIPALPGMSELELAAADVWATGVSPDSYPTQFLRADLD 973 LWAAGAAA RPDRLPG+G+S P LPGMS++ELAAADVWATGVSPD+YPTQFLR LD Sbjct 907 LWAAGAAAGERPDRLPGIGASVTAPTLPGMSDVELAAADVWATGVSPDTYPTQFLRPQLD 966 Query 974 AMGVLPAERLGSVSDGDRVLIAGAVTHRQRPATAQGVTFINLEDETGMVNVLCTPGVWAR 1033 A+GV+PA RL + DGDRVL+ GAVTHRQRPATA GVTFINLEDETGMVNV+C+ G+WA+ Sbjct 967 ALGVVPASRLLDIPDGDRVLVGGAVTHRQRPATAAGVTFINLEDETGMVNVVCSVGLWAK 1026 Query 1034 HRKLAHTAPALLIRGQVQNASGAITVVAERMGRLTLAVGARSRDFR 1079 +RKLA+TAPALLIRG+VQNA GA+TVVA+RM + L V A+SRDFR Sbjct 1027 YRKLANTAPALLIRGKVQNAEGAVTVVADRMQLMDLRVTAKSRDFR 1072 >gi|226305466|ref|YP_002765426.1| error-prone DNA polymerase [Rhodococcus erythropolis PR4] gi|226184583|dbj|BAH32687.1| error-prone DNA polymerase [Rhodococcus erythropolis PR4] Length=1095 Score = 1592 bits (4122), Expect = 0.0, Method: Compositional matrix adjust. Identities = 815/1083 (76%), Positives = 899/1083 (84%), Gaps = 4/1083 (0%) Query 1 MERVLNGKP-RHAGVPAFDADG-DVPR-SRKRGAYQPPGRERVGSSVAYAELHAHSAYSF 57 MERVL+G+P R F DG D P SRKRG Y R V YAELHAHSA+SF Sbjct 13 MERVLSGRPGRVEHEDLFPGDGSDSPAWSRKRGEYHAGELTRGTGVVPYAELHAHSAFSF 72 Query 58 LDGASTPEELVEEAARLGLCALALTDHDGLYGAVRFAEAAAELDVRTVFGAELSLGATAR 117 LDGAS PEELVEEA RLGL A+A+TDHDG YG VRFAEAA E +RTVFGAELSL + R Sbjct 73 LDGASPPEELVEEAVRLGLEAIAVTDHDGFYGVVRFAEAAREWGMRTVFGAELSLDSVPR 132 Query 118 TERPDPPGPHLLVLARGPEGYRRLSRQLAAAHLAGGEKGKPRYDFDALTEAAGGHWHILT 177 T DP G HLLVLARG EGYRRLSR++AAAHLAGGEKGK +Y++D LTEAAGGHW ILT Sbjct 133 TGTADPGGTHLLVLARGQEGYRRLSREIAAAHLAGGEKGKLQYNYDVLTEAAGGHWQILT 192 Query 178 GCRKGHVRQALSQGGPAAAQRALADLVDRFTPSRVSIELTHHGHPLDDERNAALAGLAPR 237 GCRKGHVRQAL+ GG AA AL DLV+RF RVS+ELTHHG DDERNA LA LA Sbjct 193 GCRKGHVRQALTSGGREAAAEALQDLVERFGAERVSVELTHHGLAEDDERNAVLAELARE 252 Query 238 FGVGIVATTGAHFADPSRGRLAMAMAAIRARRSLDSAAGWLAPLGGAHLRSGEEMARLFA 297 G+ VATT AHFA P R RLAMAMAA+RAR+SLD AAGWLAP GGAHLRSG EMA LF+ Sbjct 253 RGLRTVATTAAHFAAPPRRRLAMAMAAVRARQSLDEAAGWLAPTGGAHLRSGAEMATLFS 312 Query 298 WCPEAVTAAAELGERCAFGLQLIAPRLPPFDVPDGHTEDSWLRSLVMAGARERYGPPKSA 357 PEAV+ AA+LG CAF L+LIAP+LPPFDVP GHTE SWLR L M GA ERYGPP+ A Sbjct 313 LYPEAVSGAADLGRECAFDLKLIAPKLPPFDVPAGHTEASWLRELTMVGALERYGPPEGA 372 Query 358 PRAYSQIEHELKVIAQLRFPGYFLVVHDITRFCRDNDILCQGRGSAANSAVCYALGVTAV 417 P+AY Q+EHEL +I L FPGYFLVVHDI FC++NDILCQGRGSAANSAVCYA+G+T V Sbjct 373 PKAYKQLEHELAIIEGLNFPGYFLVVHDIVSFCKNNDILCQGRGSAANSAVCYAIGITNV 432 Query 418 DPVANELLFERFLSPARDGPPDIDIDIESDQREKVIQYVYHKYGRDYAAQVANVITYRGR 477 DPV N+LLFERFL+P RDGPPDID+DIESD+RE+ IQ+VY KYGR YAAQVANVITYRG+ Sbjct 433 DPVRNKLLFERFLAPERDGPPDIDVDIESDRREEAIQHVYAKYGRTYAAQVANVITYRGK 492 Query 478 SAVRDMARALGFSPGQQDAWSKQVSHWTGQADDVD-GIPEQVIDLATQIRNLPRHLGIHS 536 S+VRDMARALGFS GQQDAWSKQV W G + D IP V++LA QI PRHLGIHS Sbjct 493 SSVRDMARALGFSQGQQDAWSKQVGRWGGIDKNADTDIPRPVLELAAQIEGYPRHLGIHS 552 Query 537 GGMVICDRPIADVCPVEWARMANRSVLQWDKDDCAAIGLVKFDLLGLGMLSALHYAKDLV 596 GGMVICDRPIADVCPVEWARMANRSVLQWDKDDCAA GLVKFDLLGLGMLSALHY DLV Sbjct 553 GGMVICDRPIADVCPVEWARMANRSVLQWDKDDCAAAGLVKFDLLGLGMLSALHYMMDLV 612 Query 597 AEHKGIEVDLARLDLSEPAVYEMLARADSVGVFQVESRAQMATLPRLKPRVFYDLVVEVA 656 AEHKGI VDLA+LDLSE AVYEML RADSVGVFQVESRAQMATLPRLKPR FYDLVVEVA Sbjct 613 AEHKGITVDLAQLDLSETAVYEMLQRADSVGVFQVESRAQMATLPRLKPRNFYDLVVEVA 672 Query 657 LIRPGPIQGGSVHPYIRRRNGVDPVIYEHPSMAPALRKTLGVPLFQEQLMQLAVDCAGFS 716 LIRPGPIQGGSVHPYIRRRN ++PV Y+HPS+ AL +TLGVPLFQEQLMQ+AVD AGF+ Sbjct 673 LIRPGPIQGGSVHPYIRRRNKLEPVSYDHPSLEKALERTLGVPLFQEQLMQMAVDVAGFT 732 Query 717 AAEADQLRRAMGSKRSTERMRRLRGRFYDGMRALHGAPDEVIDRIYEKLEAFANFGFPES 776 +EADQLRRAMGSKRSTE+M +LR R Y GMR LHG DEV DRIYEKL AFANFGFPES Sbjct 733 PSEADQLRRAMGSKRSTEKMEQLRARLYQGMRDLHGIGDEVADRIYEKLYAFANFGFPES 792 Query 777 HALSFASLVFYSAWFKLHHPAAFCAALLRAQPMGFYSPQSLVADARRHGVAVHGPCVNAS 836 H+ SFA+LVFYS+WFKLHHPAAFCA LLRAQPMGFYSPQSLVADARRHGV VHG +N S Sbjct 793 HSQSFAALVFYSSWFKLHHPAAFCAGLLRAQPMGFYSPQSLVADARRHGVQVHGADINVS 852 Query 837 LAHATCENAGTEVRLGLGAVRYLGAELAEKLVAERTANGPFTSLPDLTSRVQLSVPQVEA 896 LAHAT E G EVRLGLG VR +G LAEK+V +R GPFTS DLT RV+L+ Q E+ Sbjct 853 LAHATVEAGGFEVRLGLGEVRNIGDALAEKIVEQRDLGGPFTSFLDLTGRVELTTAQAES 912 Query 897 LATAGALGCFGMSRREALWAAGAAATGRPDRLPGVGSSSHIPALPGMSELELAAADVWAT 956 LATAGAL FG+SRREALWAAGAAA RPDRLPG+G+S P LPGMS++ELAAADVWAT Sbjct 913 LATAGALASFGISRREALWAAGAAAGERPDRLPGIGASVTAPTLPGMSDVELAAADVWAT 972 Query 957 GVSPDSYPTQFLRADLDAMGVLPAERLGSVSDGDRVLIAGAVTHRQRPATAQGVTFINLE 1016 GVSPD+YPTQFLR LDA+GV+PA RL + DGDRVL+ GAVTHRQRPATA GVTFINLE Sbjct 973 GVSPDTYPTQFLRPQLDALGVVPASRLLDIPDGDRVLVGGAVTHRQRPATAAGVTFINLE 1032 Query 1017 DETGMVNVLCTPGVWARHRKLAHTAPALLIRGQVQNASGAITVVAERMGRLTLAVGARSR 1076 DETGMVNV+C+ G+WA++RKLA+TAPALLIRG+VQNA GA+TVVA+RM + L V A+SR Sbjct 1033 DETGMVNVVCSVGLWAKYRKLANTAPALLIRGKVQNAEGAVTVVADRMQLMDLRVTAKSR 1092 Query 1077 DFR 1079 DFR Sbjct 1093 DFR 1095 >gi|226365695|ref|YP_002783478.1| error-prone DNA polymerase [Rhodococcus opacus B4] gi|226244185|dbj|BAH54533.1| error-prone DNA polymerase [Rhodococcus opacus B4] Length=1084 Score = 1566 bits (4054), Expect = 0.0, Method: Compositional matrix adjust. Identities = 812/1083 (75%), Positives = 901/1083 (84%), Gaps = 15/1083 (1%) Query 1 MERVLNGKP-RHAGVPAFDADG-DVPR-SRKRGAYQPPGRERVGSSVAYAELHAHSAYSF 57 MERVL+G+P R + DG D P SRKRG Y+ +ER GS+V YAELHAHSA+SF Sbjct 13 MERVLSGRPGRVDPESLYPGDGGDSPAWSRKRGEYRAGRQERSGSTVPYAELHAHSAFSF 72 Query 58 LDGASTPEELVEEAARLGLCALALTDHDGLYGAVRFAEAAAELDVRTVFGAELSLGATAR 117 LDGAS PEELVEEA RLGL A+ALTDHDG YG VRFAEAA EL++RTVFG+ELSL Sbjct 73 LDGASPPEELVEEAVRLGLEAIALTDHDGFYGVVRFAEAAKELNMRTVFGSELSLDDA-- 130 Query 118 TERPDPPGPHLLVLARGPEGYRRLSRQLAAAHLAGGEKGKPRYDFDALTEAAGGHWHILT 177 HLLVLARG EGYRRLSR++AAAHLAGGEKG+ RYD D L +AAGGHW ILT Sbjct 131 ---------HLLVLARGQEGYRRLSREIAAAHLAGGEKGRLRYDLDRLADAAGGHWQILT 181 Query 178 GCRKGHVRQALSQGGPAAAQRALADLVDRFTPSRVSIELTHHGHPLDDERNAALAGLAPR 237 GCRKGHVRQAL+ GGP AA L DL+DRF RV++ELTHHG D ERNA LA LA R Sbjct 182 GCRKGHVRQALADGGPDAAAARLRDLIDRFGADRVTVELTHHGVAEDAERNACLAELAQR 241 Query 238 FGVGIVATTGAHFADPSRGRLAMAMAAIRARRSLDSAAGWLAPLGGAHLRSGEEMARLFA 297 G+ ++A+T AHFA P R RLAMAMAA+RAR+SLD AAG+LAP GGAHLRSGEEMA LFA Sbjct 242 HGLRVIASTAAHFAGPPRRRLAMAMAAVRARQSLDDAAGYLAPAGGAHLRSGEEMAHLFA 301 Query 298 WCPEAVTAAAELGERCAFGLQLIAPRLPPFDVPDGHTEDSWLRSLVMAGARERYGPPKSA 357 P+AV AAELG CAF L+LIAP+LPPFDVPDGHTE SWLR L M GAR RYG P Sbjct 302 AYPDAVRGAAELGLECAFDLRLIAPQLPPFDVPDGHTEASWLRQLTMDGARRRYGAPADR 361 Query 358 PRAYSQIEHELKVIAQLRFPGYFLVVHDITRFCRDNDILCQGRGSAANSAVCYALGVTAV 417 P AY QIEHEL +I L FPGYFLVVHDI FC++NDILCQGRGSAANSAVCYA+G+T V Sbjct 362 PEAYRQIEHELGIITGLNFPGYFLVVHDIVSFCKNNDILCQGRGSAANSAVCYAIGITNV 421 Query 418 DPVANELLFERFLSPARDGPPDIDIDIESDQREKVIQYVYHKYGRDYAAQVANVITYRGR 477 DPV N+LLFERFLSP RDGPPDID+DIESD+RE+ IQ+VY KYGR YAAQVANVITYRG+ Sbjct 422 DPVRNKLLFERFLSPERDGPPDIDVDIESDRREEAIQHVYTKYGRQYAAQVANVITYRGK 481 Query 478 SAVRDMARALGFSPGQQDAWSKQVSHWTGQADDV-DGIPEQVIDLATQIRNLPRHLGIHS 536 S+VRDMARALGFS GQQDAWSKQVS W G + IP V++LA QI PRHLGIHS Sbjct 482 SSVRDMARALGFSQGQQDAWSKQVSRWGGIGKEAGTDIPPAVLELAAQIEGFPRHLGIHS 541 Query 537 GGMVICDRPIADVCPVEWARMANRSVLQWDKDDCAAIGLVKFDLLGLGMLSALHYAKDLV 596 GGMVICDRPIADVCPVEWARMANRSVLQWDKDDCAA+GLVKFD+LGLGMLSALHY DLV Sbjct 542 GGMVICDRPIADVCPVEWARMANRSVLQWDKDDCAAVGLVKFDMLGLGMLSALHYMIDLV 601 Query 597 AEHKGIEVDLARLDLSEPAVYEMLARADSVGVFQVESRAQMATLPRLKPRVFYDLVVEVA 656 AEHKGIEVDLA+LDLSE AVYEML RADSVGVFQVESRAQMATLPRLKPR FYDLVVEVA Sbjct 602 AEHKGIEVDLAQLDLSEEAVYEMLQRADSVGVFQVESRAQMATLPRLKPRNFYDLVVEVA 661 Query 657 LIRPGPIQGGSVHPYIRRRNGVDPVIYEHPSMAPALRKTLGVPLFQEQLMQLAVDCAGFS 716 LIRPGPIQGGSVHPYIRRRN ++PV Y+HPS+ AL++TLGVPLFQEQLMQ+AVD AGFS Sbjct 662 LIRPGPIQGGSVHPYIRRRNKLEPVTYDHPSLEKALKRTLGVPLFQEQLMQMAVDVAGFS 721 Query 717 AAEADQLRRAMGSKRSTERMRRLRGRFYDGMRALHGAPDEVIDRIYEKLEAFANFGFPES 776 AEADQLRRAMGSKRS E+M RLRGRFY GMR LHG +V DRIYEKL AFANFGFPES Sbjct 722 PAEADQLRRAMGSKRSPEKMERLRGRFYQGMRELHGIGGDVADRIYEKLFAFANFGFPES 781 Query 777 HALSFASLVFYSAWFKLHHPAAFCAALLRAQPMGFYSPQSLVADARRHGVAVHGPCVNAS 836 H+ SFA+LVFYS+WFKLHHPAAFCA LLRAQPMGFYSPQSLVADARRHGV VHG VNAS Sbjct 782 HSQSFAALVFYSSWFKLHHPAAFCAGLLRAQPMGFYSPQSLVADARRHGVRVHGADVNAS 841 Query 837 LAHATCENAGTEVRLGLGAVRYLGAELAEKLVAERTANGPFTSLPDLTSRVQLSVPQVEA 896 LAHAT E GTEVRLGLG VR++G LAE++V R GP+TS DLT RV+LS Q E+ Sbjct 842 LAHATVEAGGTEVRLGLGEVRHIGTALAERIVDSRGDGGPYTSFLDLTGRVELSTAQAES 901 Query 897 LATAGALGCFGMSRREALWAAGAAATGRPDRLPGVGSSSHIPALPGMSELELAAADVWAT 956 LATAGAL FG+SRREALWAAGAAA R DRLPG+G+S+ P LPGMS+LELAAADVWAT Sbjct 902 LATAGALDSFGLSRREALWAAGAAAGERRDRLPGIGASTRAPTLPGMSDLELAAADVWAT 961 Query 957 GVSPDSYPTQFLRADLDAMGVLPAERLGSVSDGDRVLIAGAVTHRQRPATAQGVTFINLE 1016 GVSPD+YPT+FLR LDA+GV+PA L V DGDRVL+ GAVTHRQRPATA GVTFINLE Sbjct 962 GVSPDTYPTEFLRPQLDALGVIPAAHLLDVPDGDRVLVGGAVTHRQRPATAAGVTFINLE 1021 Query 1017 DETGMVNVLCTPGVWARHRKLAHTAPALLIRGQVQNASGAITVVAERMGRLTLAVGARSR 1076 DETGMVNV+C+ G+WA++RKLA+TAPALL+RG+VQNA GA+TVVA+R+ + L V A+SR Sbjct 1022 DETGMVNVVCSVGLWAKYRKLANTAPALLVRGKVQNAEGAVTVVADRLQLMDLRVSAKSR 1081 Query 1077 DFR 1079 DFR Sbjct 1082 DFR 1084 >gi|111023190|ref|YP_706162.1| error-prone DNA polymerase [Rhodococcus jostii RHA1] gi|110822720|gb|ABG98004.1| DNA-directed DNA polymerase alpha subunit (DNA polymerase III alpha subunit) [Rhodococcus jostii RHA1] Length=1084 Score = 1563 bits (4047), Expect = 0.0, Method: Compositional matrix adjust. Identities = 810/1083 (75%), Positives = 902/1083 (84%), Gaps = 15/1083 (1%) Query 1 MERVLNGKP-RHAGVPAFDADG-DVPR-SRKRGAYQPPGRERVGSSVAYAELHAHSAYSF 57 MERVL+G+P R + + DG D P SRKRG Y+ +ER GS+V YAELHAHSA+SF Sbjct 13 MERVLSGRPGRVSPESLYPGDGGDSPAWSRKRGEYRAGPQERAGSTVPYAELHAHSAFSF 72 Query 58 LDGASTPEELVEEAARLGLCALALTDHDGLYGAVRFAEAAAELDVRTVFGAELSLGATAR 117 LDGAS PEELVEEA RLGL A+ALTDHDG YG VRFAEAA EL++RT FG+EL+L Sbjct 73 LDGASPPEELVEEAVRLGLEAIALTDHDGFYGVVRFAEAAKELNMRTAFGSELTLDDA-- 130 Query 118 TERPDPPGPHLLVLARGPEGYRRLSRQLAAAHLAGGEKGKPRYDFDALTEAAGGHWHILT 177 HLLVLARG EGYRRLSR++AAAHLAGGEKGK RYD D LT+AAGGHW ILT Sbjct 131 ---------HLLVLARGQEGYRRLSREIAAAHLAGGEKGKLRYDLDRLTDAAGGHWQILT 181 Query 178 GCRKGHVRQALSQGGPAAAQRALADLVDRFTPSRVSIELTHHGHPLDDERNAALAGLAPR 237 GCRKGHVRQAL+ GGP AA L +L+DRF RV++ELTHHG D ERNA+LA LA + Sbjct 182 GCRKGHVRQALAAGGPDAAAARLRELIDRFGADRVTVELTHHGIAEDAERNASLAELAQQ 241 Query 238 FGVGIVATTGAHFADPSRGRLAMAMAAIRARRSLDSAAGWLAPLGGAHLRSGEEMARLFA 297 G+ ++A+T AHFA P R RLAMAMAA+RAR+SLD AAG LAP GGAHLRSGEEMA LFA Sbjct 242 HGLPVIASTAAHFAGPPRRRLAMAMAAVRARQSLDDAAGHLAPAGGAHLRSGEEMAHLFA 301 Query 298 WCPEAVTAAAELGERCAFGLQLIAPRLPPFDVPDGHTEDSWLRSLVMAGARERYGPPKSA 357 PEAV AA+LG CAF L+LIAP+LPPFDVPDGHTE SWLR L M GAR RYG P Sbjct 302 AYPEAVRGAADLGRECAFDLRLIAPQLPPFDVPDGHTEASWLRQLTMDGARRRYGAPADR 361 Query 358 PRAYSQIEHELKVIAQLRFPGYFLVVHDITRFCRDNDILCQGRGSAANSAVCYALGVTAV 417 P AY QIEHEL +I L FPGYFLVVHDI FC++NDILCQGRGSAANSAVCYA+G+T V Sbjct 362 PEAYRQIEHELDIITGLNFPGYFLVVHDIVSFCKNNDILCQGRGSAANSAVCYAIGITNV 421 Query 418 DPVANELLFERFLSPARDGPPDIDIDIESDQREKVIQYVYHKYGRDYAAQVANVITYRGR 477 DPV N+LLFERFLSP RDGPPDID+DIESD+RE+ IQ+VY KYGR YAAQVANVITYRG+ Sbjct 422 DPVRNKLLFERFLSPERDGPPDIDVDIESDRREEAIQHVYAKYGRQYAAQVANVITYRGK 481 Query 478 SAVRDMARALGFSPGQQDAWSKQVSHWTGQADDV-DGIPEQVIDLATQIRNLPRHLGIHS 536 S+VRDMARALGFS GQQDAWSKQVS W G +V IP V++LA QI PRHLGIHS Sbjct 482 SSVRDMARALGFSQGQQDAWSKQVSRWGGIGKEVGTDIPPAVLELAAQIEGFPRHLGIHS 541 Query 537 GGMVICDRPIADVCPVEWARMANRSVLQWDKDDCAAIGLVKFDLLGLGMLSALHYAKDLV 596 GGMVICDRPIADVCPVEWARM NRSVLQWDKDDCAA+GLVKFD+LGLGMLSALHY DLV Sbjct 542 GGMVICDRPIADVCPVEWARMENRSVLQWDKDDCAAVGLVKFDMLGLGMLSALHYMIDLV 601 Query 597 AEHKGIEVDLARLDLSEPAVYEMLARADSVGVFQVESRAQMATLPRLKPRVFYDLVVEVA 656 AEHKGIEVDLA+LDLSE AVYEML RADSVGVFQVESRAQMATLPRLKPR FYDLVVEVA Sbjct 602 AEHKGIEVDLAQLDLSEEAVYEMLQRADSVGVFQVESRAQMATLPRLKPRNFYDLVVEVA 661 Query 657 LIRPGPIQGGSVHPYIRRRNGVDPVIYEHPSMAPALRKTLGVPLFQEQLMQLAVDCAGFS 716 LIRPGPIQGGSVHPYIRRRN ++PV Y+HPS+ AL++TLGVPLFQEQLMQ+AVD AGFS Sbjct 662 LIRPGPIQGGSVHPYIRRRNKLEPVTYDHPSLEKALKRTLGVPLFQEQLMQMAVDVAGFS 721 Query 717 AAEADQLRRAMGSKRSTERMRRLRGRFYDGMRALHGAPDEVIDRIYEKLEAFANFGFPES 776 AEADQLRRAMGSKRS E+M RLRGR Y GMR LHG D+V DRIYEKL AFANFGFPES Sbjct 722 PAEADQLRRAMGSKRSPEKMERLRGRLYQGMRELHGIGDDVADRIYEKLYAFANFGFPES 781 Query 777 HALSFASLVFYSAWFKLHHPAAFCAALLRAQPMGFYSPQSLVADARRHGVAVHGPCVNAS 836 H+ SFA+LVFYS+WFKLHHPAAFCA LLRAQPMGFYSPQSLVADARRHGV VHG +NAS Sbjct 782 HSQSFAALVFYSSWFKLHHPAAFCAGLLRAQPMGFYSPQSLVADARRHGVPVHGADINAS 841 Query 837 LAHATCENAGTEVRLGLGAVRYLGAELAEKLVAERTANGPFTSLPDLTSRVQLSVPQVEA 896 LAHAT E GTEVRLGLG VR++G LAE++V R GP+TS DLT RV+LS Q E+ Sbjct 842 LAHATVEAGGTEVRLGLGEVRHIGTALAERIVESRGDGGPYTSFLDLTGRVELSTAQAES 901 Query 897 LATAGALGCFGMSRREALWAAGAAATGRPDRLPGVGSSSHIPALPGMSELELAAADVWAT 956 LATAGAL FG+SRREALWAAGAAA R DRLPG+G+S+ P LPGMS+LELAAADVWAT Sbjct 902 LATAGALDSFGLSRREALWAAGAAAGERRDRLPGIGASTRAPTLPGMSDLELAAADVWAT 961 Query 957 GVSPDSYPTQFLRADLDAMGVLPAERLGSVSDGDRVLIAGAVTHRQRPATAQGVTFINLE 1016 GVSPD+YPTQFLR LDA+GV+PA L V DGDRVL+ GAVTHRQRPATA GVTFINLE Sbjct 962 GVSPDTYPTQFLRPQLDALGVIPAAGLLDVPDGDRVLVGGAVTHRQRPATAAGVTFINLE 1021 Query 1017 DETGMVNVLCTPGVWARHRKLAHTAPALLIRGQVQNASGAITVVAERMGRLTLAVGARSR 1076 DETGMVNV+C+ G+WA++RKLA+TAPALL+RG+VQNA GA+TVVA+R+ + L V A+SR Sbjct 1022 DETGMVNVVCSVGLWAKYRKLANTAPALLVRGKVQNAEGAVTVVADRLQLMDLRVSAKSR 1081 Query 1077 DFR 1079 DFR Sbjct 1082 DFR 1084 >gi|333921664|ref|YP_004495245.1| Error-prone DNA polymerase [Amycolicicoccus subflavus DQS3-9A1] gi|333483885|gb|AEF42445.1| Error-prone DNA polymerase [Amycolicicoccus subflavus DQS3-9A1] Length=1088 Score = 1556 bits (4030), Expect = 0.0, Method: Compositional matrix adjust. Identities = 788/1083 (73%), Positives = 896/1083 (83%), Gaps = 13/1083 (1%) Query 1 MERVLNGKPRHAGVPAFDADG-DVPR-SRKRGAYQPPGRERVGSSVAYAELHAHSAYSFL 58 +ER+L+G+P F DG D P SRKR AY+PP R S V YAELHAH+A+SFL Sbjct 13 LERILSGRPGQQ----FPGDGNDSPAWSRKRSAYEPPELARTVSRVPYAELHAHTAFSFL 68 Query 59 DGASTPEELVEEAARLGLCALALTDHDGLYGAVRFAEAAAELDVRTVFGAELSLGA-TAR 117 DGAS PEE+VE+AARLGL A+A+TDHDGLYG VRFAEAA ELD+ TVFGAEL L A R Sbjct 69 DGASMPEEMVEQAARLGLKAIAVTDHDGLYGVVRFAEAALELDIGTVFGAELGLEAVNPR 128 Query 118 TERPDPPGPHLLVLARGPEGYRRLSRQLAAAHLAGGEKGKPRYDFDALTEAAGGHWHILT 177 T PDP G HLLVLA+G EGYRRLSRQ+A AHLAGGEKGK RYD DAL AAG HW +LT Sbjct 129 TGEPDPDGTHLLVLAKGQEGYRRLSRQIAEAHLAGGEKGKLRYDIDALANAAGEHWQVLT 188 Query 178 GCRKGHVRQALSQGGPAAAQRALADLVDRFTPSRVSIELTHHGHPLDDERNAALAGLAPR 237 GCRKG VR+AL+QGG AA++AL L++RF V++ELT G P DDERN L LA + Sbjct 189 GCRKGSVRKALAQGGSEAAEQALIGLIERF--GNVAVELTKTGLPDDDERNDLLYELAHK 246 Query 238 FGVGIVATTGAHFADPSRGRLAMAMAAIRARRSLDSAAGWLAPLGGAHLRSGEEMARLFA 297 + + VATTGAHFA P R RLA AM+A+RARRSLD AGWL P LRSGEEMA LF+ Sbjct 247 YRLPAVATTGAHFARPDRARLAAAMSAVRARRSLDDTAGWLPPAAHGFLRSGEEMAHLFS 306 Query 298 WCPEAVTAAAELGERCAFGLQLIAPRLPPFDVPDGHTEDSWLRSLVMAGARERYGPPKSA 357 P V AA++GERC+F L+LIAP+LPPFDVP+GHTED+WLR + M GA +RYGP Sbjct 307 RYPGVVHTAADIGERCSFDLRLIAPKLPPFDVPEGHTEDTWLREITMRGAYDRYGP--HH 364 Query 358 PRAYSQIEHELKVIAQLRFPGYFLVVHDITRFCRDNDILCQGRGSAANSAVCYALGVTAV 417 P+AY+QIEHEL++I QL FPGYFLVVHDI FC+ NDILCQGRGSAANSAVCYA+G+T V Sbjct 365 PKAYAQIEHELRIIKQLGFPGYFLVVHDIVSFCKRNDILCQGRGSAANSAVCYAIGITNV 424 Query 418 DPVANELLFERFLSPARDGPPDIDIDIESDQREKVIQYVYHKYGRDYAAQVANVITYRGR 477 D VAN LLFERFL+P RDGPPDID+DIESD+RE+ IQYVY +YGR +AAQVANVITYRGR Sbjct 425 DAVANGLLFERFLAPERDGPPDIDLDIESDRREEAIQYVYQRYGRTHAAQVANVITYRGR 484 Query 478 SAVRDMARALGFSPGQQDAWSKQVSHWTG--QADDVDGIPEQVIDLATQIRNLPRHLGIH 535 SAVRDMARALGFS GQQDAWSK++ W+G DD GIP+ V+DLA QI PRHLGIH Sbjct 485 SAVRDMARALGFSQGQQDAWSKRIDRWSGVRNGDDDWGIPKPVLDLAAQIEGFPRHLGIH 544 Query 536 SGGMVICDRPIADVCPVEWARMANRSVLQWDKDDCAAIGLVKFDLLGLGMLSALHYAKDL 595 SGGMVICDRP+ADVCPVEWARMANRSVLQWDKDDCAA+GLVKFDLLGLGMLSALHYA DL Sbjct 545 SGGMVICDRPVADVCPVEWARMANRSVLQWDKDDCAAVGLVKFDLLGLGMLSALHYAIDL 604 Query 596 VAEHKGIEVDLARLDLSEPAVYEMLARADSVGVFQVESRAQMATLPRLKPRVFYDLVVEV 655 VAEHKG+EVDLA++DL+E AVYEML RADSVGVFQVESRAQMATLPRLKPR F+DLVVEV Sbjct 605 VAEHKGVEVDLAKIDLTEQAVYEMLQRADSVGVFQVESRAQMATLPRLKPRNFFDLVVEV 664 Query 656 ALIRPGPIQGGSVHPYIRRRNGVDPVIYEHPSMAPALRKTLGVPLFQEQLMQLAVDCAGF 715 ALIRPGPIQGGSVHPYIRRRNG++PVIY+HPS+ AL+KTLGVPLFQEQLMQ+AVD AGF Sbjct 665 ALIRPGPIQGGSVHPYIRRRNGLEPVIYDHPSLEKALKKTLGVPLFQEQLMQIAVDVAGF 724 Query 716 SAAEADQLRRAMGSKRSTERMRRLRGRFYDGMRALHGAPDEVIDRIYEKLEAFANFGFPE 775 SA+EADQLRRAMGSKRS E+M RL+ RFY+GMR HG V DRIYEKL AFANFGFPE Sbjct 725 SASEADQLRRAMGSKRSPEKMERLKVRFYEGMRQKHGITGAVADRIYEKLYAFANFGFPE 784 Query 776 SHALSFASLVFYSAWFKLHHPAAFCAALLRAQPMGFYSPQSLVADARRHGVAVHGPCVNA 835 SH+ SFA+LVFYS+WFKLH+PAAFCAALLRAQPMGFYSPQSLVADARRH V VHGP VNA Sbjct 785 SHSQSFAALVFYSSWFKLHYPAAFCAALLRAQPMGFYSPQSLVADARRHDVTVHGPDVNA 844 Query 836 SLAHATCENAGTEVRLGLGAVRYLGAELAEKLVAERTANGPFTSLPDLTSRVQLSVPQVE 895 SLAHAT EN GTEVRLGL +VR +G AE++VAER + G +T L DL RV+L+ Q+E Sbjct 845 SLAHATLENDGTEVRLGLASVRGIGQAKAEEIVAERESGGSYTVLLDLAGRVELTTSQIE 904 Query 896 ALATAGALGCFGMSRREALWAAGAAATGRPDRLPGVGSSSHIPALPGMSELELAAADVWA 955 ALAT GALGCFG+SRRE LWAAGAAA RPDRLPG+G S P LPGMS+ ELAAAD WA Sbjct 905 ALATGGALGCFGISRREGLWAAGAAAEERPDRLPGMGPSLDAPTLPGMSDAELAAADAWA 964 Query 956 TGVSPDSYPTQFLRADLDAMGVLPAERLGSVSDGDRVLIAGAVTHRQRPATAQGVTFINL 1015 TG++PD+YPT+F R +L +GV+PA++L DG RVL+ GAVTHRQRPATA GVTFINL Sbjct 965 TGITPDNYPTEFARPELKKLGVIPADQLLQAPDGSRVLVGGAVTHRQRPATAAGVTFINL 1024 Query 1016 EDETGMVNVLCTPGVWARHRKLAHTAPALLIRGQVQNASGAITVVAERMGRLTLAVGARS 1075 EDETGMVNV+C+ G+W R+R LAHTAPALLIRG+VQNA G +TVVA+R+ RL L V A+S Sbjct 1025 EDETGMVNVVCSVGLWRRYRVLAHTAPALLIRGKVQNAEGVVTVVADRLERLDLRVAAKS 1084 Query 1076 RDF 1078 RDF Sbjct 1085 RDF 1087 >gi|289763553|ref|ZP_06522931.1| DNA polymerase III alpha subunit dnaE2 (DNA nucleotidyltransferase) [Mycobacterium tuberculosis GM 1503] gi|289711059|gb|EFD75075.1| DNA polymerase III alpha subunit dnaE2 (DNA nucleotidyltransferase) [Mycobacterium tuberculosis GM 1503] Length=861 Score = 1555 bits (4025), Expect = 0.0, Method: Compositional matrix adjust. Identities = 778/780 (99%), Positives = 778/780 (99%), Gaps = 0/780 (0%) Query 300 PEAVTAAAELGERCAFGLQLIAPRLPPFDVPDGHTEDSWLRSLVMAGARERYGPPKSAPR 359 P VTAAAELGERCAFGLQLIAPRLPPFDVPDGHTEDSWLRSLVMAGARERYGPPKSAPR Sbjct 82 PRRVTAAAELGERCAFGLQLIAPRLPPFDVPDGHTEDSWLRSLVMAGARERYGPPKSAPR 141 Query 360 AYSQIEHELKVIAQLRFPGYFLVVHDITRFCRDNDILCQGRGSAANSAVCYALGVTAVDP 419 AYSQIEHELKVIAQLRFPGYFLVVHDITRFCRDNDILCQGRGSAANSAVCYALGVTAVDP Sbjct 142 AYSQIEHELKVIAQLRFPGYFLVVHDITRFCRDNDILCQGRGSAANSAVCYALGVTAVDP 201 Query 420 VANELLFERFLSPARDGPPDIDIDIESDQREKVIQYVYHKYGRDYAAQVANVITYRGRSA 479 VANELLFERFLSPARDGPPDIDIDIESDQREKVIQYVYHKYGRDYAAQVANVITYRGRSA Sbjct 202 VANELLFERFLSPARDGPPDIDIDIESDQREKVIQYVYHKYGRDYAAQVANVITYRGRSA 261 Query 480 VRDMARALGFSPGQQDAWSKQVSHWTGQADDVDGIPEQVIDLATQIRNLPRHLGIHSGGM 539 VRDMARALGFSPGQQDAWSKQVSHWTGQADDVDGIPEQVIDLATQIRNLPRHLGIHSGGM Sbjct 262 VRDMARALGFSPGQQDAWSKQVSHWTGQADDVDGIPEQVIDLATQIRNLPRHLGIHSGGM 321 Query 540 VICDRPIADVCPVEWARMANRSVLQWDKDDCAAIGLVKFDLLGLGMLSALHYAKDLVAEH 599 VICDRPIADVCPVEWARMANRSVLQWDKDDCAAIGLVKFDLLGLGMLSALHYAKDLVAEH Sbjct 322 VICDRPIADVCPVEWARMANRSVLQWDKDDCAAIGLVKFDLLGLGMLSALHYAKDLVAEH 381 Query 600 KGIEVDLARLDLSEPAVYEMLARADSVGVFQVESRAQMATLPRLKPRVFYDLVVEVALIR 659 KGIEVDLARLDLSEPAVYEMLARADSVGVFQVESRAQMATLPRLKPRVFYDLVVEVALIR Sbjct 382 KGIEVDLARLDLSEPAVYEMLARADSVGVFQVESRAQMATLPRLKPRVFYDLVVEVALIR 441 Query 660 PGPIQGGSVHPYIRRRNGVDPVIYEHPSMAPALRKTLGVPLFQEQLMQLAVDCAGFSAAE 719 PGPIQGGSVHPYIRRRNGVDPVIYEHPSMAPALRKTLGVPLFQEQLMQLAVDCAGFSAAE Sbjct 442 PGPIQGGSVHPYIRRRNGVDPVIYEHPSMAPALRKTLGVPLFQEQLMQLAVDCAGFSAAE 501 Query 720 ADQLRRAMGSKRSTERMRRLRGRFYDGMRALHGAPDEVIDRIYEKLEAFANFGFPESHAL 779 ADQLRRAMGSKRSTERMRRLRGRFYDGMRALHGAPDEVIDRIYEKLEAFANFGFPESHAL Sbjct 502 ADQLRRAMGSKRSTERMRRLRGRFYDGMRALHGAPDEVIDRIYEKLEAFANFGFPESHAL 561 Query 780 SFASLVFYSAWFKLHHPAAFCAALLRAQPMGFYSPQSLVADARRHGVAVHGPCVNASLAH 839 SFASLVFYSAWFKLHHPAAFCAALLRAQPMGFYSPQSLVADARRHGVAVHGPCVNASLAH Sbjct 562 SFASLVFYSAWFKLHHPAAFCAALLRAQPMGFYSPQSLVADARRHGVAVHGPCVNASLAH 621 Query 840 ATCENAGTEVRLGLGAVRYLGAELAEKLVAERTANGPFTSLPDLTSRVQLSVPQVEALAT 899 ATCENAGTEVRLGLGAVRYLGAELAEKLVAERTANGPFTSLPDLTSRVQLSVPQVEALAT Sbjct 622 ATCENAGTEVRLGLGAVRYLGAELAEKLVAERTANGPFTSLPDLTSRVQLSVPQVEALAT 681 Query 900 AGALGCFGMSRREALWAAGAAATGRPDRLPGVGSSSHIPALPGMSELELAAADVWATGVS 959 AGALGCFGMSRREALWAAGAAATGRPDRLPGVGSSSHIPALPGMSELELAAADVWATGVS Sbjct 682 AGALGCFGMSRREALWAAGAAATGRPDRLPGVGSSSHIPALPGMSELELAAADVWATGVS 741 Query 960 PDSYPTQFLRADLDAMGVLPAERLGSVSDGDRVLIAGAVTHRQRPATAQGVTFINLEDET 1019 PDSYPTQFLRADLDAMGVLPAERLGSVSDGDRVLIAGAVTHRQRPATAQGVTFINLEDET Sbjct 742 PDSYPTQFLRADLDAMGVLPAERLGSVSDGDRVLIAGAVTHRQRPATAQGVTFINLEDET 801 Query 1020 GMVNVLCTPGVWARHRKLAHTAPALLIRGQVQNASGAITVVAERMGRLTLAVGARSRDFR 1079 GMVNVLCTPGVWARHRKLAHTAPALLIRGQVQNASGAITVVAERMGRLTLAVGARSRDFR Sbjct 802 GMVNVLCTPGVWARHRKLAHTAPALLIRGQVQNASGAITVVAERMGRLTLAVGARSRDFR 861 >gi|54022882|ref|YP_117124.1| error-prone DNA polymerase [Nocardia farcinica IFM 10152] gi|71151830|sp|Q5Z1D1.1|DNAE2_NOCFA RecName: Full=Error-prone DNA polymerase gi|54014390|dbj|BAD55760.1| putative DNA polymerase III alpha subunit [Nocardia farcinica IFM 10152] Length=1146 Score = 1515 bits (3922), Expect = 0.0, Method: Compositional matrix adjust. Identities = 799/1134 (71%), Positives = 891/1134 (79%), Gaps = 55/1134 (4%) Query 1 MERVLNGKPRHAGVPA-FDADG-DVPR-SRKRGAY-QPPGRERVGSSVAYAELHAHSAYS 56 +ERVL+G+P A + DG D P SRKR Y P R +V YAELHAHSAYS Sbjct 13 LERVLSGRPGRTDPEAMYPGDGGDSPAWSRKREPYLAEPIRPVDRPTVPYAELHAHSAYS 72 Query 57 FLDGASTPEELVEEAARLGLCALALTDHDGLYGAVRFAEAAAELDVRTVFGAELSLG--- 113 FLDGAS PEELVEEA RLGL A+ALTDHDG YG VRFAEAA E + TVFGAELSLG Sbjct 73 FLDGASQPEELVEEAVRLGLEAIALTDHDGFYGTVRFAEAAKEWGIATVFGAELSLGVAR 132 Query 114 ---------------------------------ATARTERPDPPGPHLLVLARGPEGYRR 140 + RT PDPPGPHLLVLARG EGYRR Sbjct 133 PAPRRSARKAARGRGRAVRYAATPEFEHAAAPDSAPRTGEPDPPGPHLLVLARGQEGYRR 192 Query 141 LSRQLAAAHLAGGEKGKPRYDFDALTEAAGGHWHILTGCRKGHVRQALS------QGGPA 194 LSR++AAAHLA GEKG RYD DALT AAGGHWHILTGCRKGH+R AL+ + G Sbjct 193 LSREIAAAHLAAGEKGVLRYDIDALTAAAGGHWHILTGCRKGHLRTALADDLAAGETGLP 252 Query 195 AAQRALADLVDRFTPSRVSIELTHHGHPLDDERNAALAGLAPRFGVGIVATTGAHFADPS 254 A+ AL DLV+RF RVS+ELTHHG P DDERNA L LA R G+ ++ATTGAHFA P Sbjct 253 RAEAALRDLVERFGADRVSVELTHHGVPADDERNALLIALADRVGLPVLATTGAHFAGPE 312 Query 255 RGRLAMAMAAIRARRSLDSAAGWLAPLGGAHLRSGEEMARLFAWCPEAVTAAAELGERCA 314 + R AMA+AAIRARRSLD AGWLAP GGAHLRSG EMARLFA CP+AV A L CA Sbjct 313 QRRRAMALAAIRARRSLDEMAGWLAPAGGAHLRSGAEMARLFAACPDAVANAVALSRECA 372 Query 315 FGLQLIAPRLPPFDVPDGHTEDSWLRSLVMAGARERYGPPKSAPRAYSQIEHELKVIAQL 374 F L+LIAP+LPPF VPDGH E+SWLR LV+ GA RYGPP + P AY Q+EHEL+VIA L Sbjct 373 FDLRLIAPQLPPFAVPDGHDENSWLRELVLRGAARRYGPPHANPPAYRQLEHELEVIATL 432 Query 375 RFPGYFLVVHDITRFCRDNDILCQGRGSAANSAVCYALGVTAVDPVANELLFERFLSPAR 434 FPGYFLVVHDI FC N ILCQGRGSAANSAVC+A+G+T VDPVANELLFERFLSP R Sbjct 433 GFPGYFLVVHDIVSFCERNGILCQGRGSAANSAVCFAIGITNVDPVANELLFERFLSPER 492 Query 435 DGPPDIDIDIESDQREKVIQYVYHKYGRDYAAQVANVITYRGRSAVRDMARALGFSPGQQ 494 DGPPDIDIDIESD+RE+ IQ+VY +YGR+YAAQVANVITYRG+SAVRD A+ALGFSPGQQ Sbjct 493 DGPPDIDIDIESDRREEAIQHVYARYGREYAAQVANVITYRGKSAVRDAAKALGFSPGQQ 552 Query 495 DAWSKQVSHWTG-QADDVDGIPEQVIDLATQIRNLPRHLGIHSGGMVICDRPIADVCPVE 553 DAWSKQVS WTG A+ IPEQV+ LA + LPRH+GIHSGGMVICDRPIADVCPVE Sbjct 553 DAWSKQVSRWTGVGAETGTDIPEQVLRLAADLEGLPRHMGIHSGGMVICDRPIADVCPVE 612 Query 554 WARMANRSVLQWDKDDCAAIGLVKFDLLGLGMLSALHYAKDLVAEHKGIEVDLARLDLSE 613 WARMA RSVLQWDKDDCAA+GLVKFD+LGLGMLSALHY DLV EH+G+EV L LDL E Sbjct 613 WARMAGRSVLQWDKDDCAAVGLVKFDMLGLGMLSALHYMIDLVREHEGVEVRLHELDLKE 672 Query 614 PAVYEMLARADSVGVFQVESRAQMATLPRLKPRVFYDLVVEVALIRPGPIQGGSVHPYIR 673 PAVYEML+RADSVGVFQVESRAQMATLPRL+PR FYDLVVEVALIRPGPIQGGSVHPYIR Sbjct 673 PAVYEMLSRADSVGVFQVESRAQMATLPRLRPREFYDLVVEVALIRPGPIQGGSVHPYIR 732 Query 674 RRNGVDPVIYEHPSMAPALRKTLGVPLFQEQLMQLAVDCAGFSAAEADQLRRAMGSKRST 733 RRNG +PV Y+HP++ +L +TLGVPLFQEQLMQ+AVD AGF+AAEADQLRRAMGSKRS Sbjct 733 RRNGTEPVTYDHPALENSLGRTLGVPLFQEQLMQMAVDVAGFTAAEADQLRRAMGSKRSP 792 Query 734 ERMRRLRGRFYDGMRALHGAPDEVIDRIYEKLEAFANFGFPESHALSFASLVFYSAWFKL 793 ERMRRL+ R Y GM LHG EV DRIYEKL AFANFGFPESH+ SFA+LVFYSAWFKL Sbjct 793 ERMRRLKERLYRGMAELHGITGEVADRIYEKLYAFANFGFPESHSQSFAALVFYSAWFKL 852 Query 794 HHPAAFCAALLRAQPMGFYSPQSLVADARRHGVAVHGPCVNASLAHATCENAGTEVRLGL 853 HHPAAFCA LLRAQPMGFYSPQSLVADARRHGV VHGP VNASLA AT EN G EVRLGL Sbjct 853 HHPAAFCAGLLRAQPMGFYSPQSLVADARRHGVPVHGPDVNASLAEATLENGGREVRLGL 912 Query 854 GAVRYLGAELAEKLVAERTANGPFTSLPDLTSRVQLSVPQVEALATAGAL----GCFGMS 909 VR++G+ELAE++VA R +GP+TS+ DLT RV+L+V Q EALATAGA G G Sbjct 913 AGVRHIGSELAERIVAARVEHGPYTSVLDLTGRVELTVAQAEALATAGAFDSVTGPSGAE 972 Query 910 RR----EALWAAGAAATGRPDRLPGVGSSSHIPALPGMSELELAAADVWATGVSPDSYPT 965 R ALWAAGAAA R LPG G ++ PALPGMS LELAAADVWATG+SP SYPT Sbjct 973 RSGGRRAALWAAGAAARERAHLLPGTGPAADAPALPGMSALELAAADVWATGISPGSYPT 1032 Query 966 QFLRADLDAMGVLPAERLGSVSDGDRVLIAGAVTHRQRPATAQGVTFINLEDETGMVNVL 1025 +FLRA +D +GV+PA RL V DG RVL+ GAVTHRQRPATA GVTF+NLEDETGMVNV+ Sbjct 1033 EFLRARMDELGVIPAGRLLEVRDGSRVLVGGAVTHRQRPATAAGVTFLNLEDETGMVNVV 1092 Query 1026 CTPGVWARHRKLAHTAPALLIRGQVQNASGAITVVAERMGRLTLAVGARSRDFR 1079 C+ G+W R+R LA +A ALL+RG+VQNA GA++VVAE + L+L +G+RSRDFR Sbjct 1093 CSVGLWTRYRALAQSASALLVRGRVQNAEGAVSVVAEHLQLLSLGMGSRSRDFR 1146 >gi|296138661|ref|YP_003645904.1| DNA polymerase III subunit alpha [Tsukamurella paurometabola DSM 20162] gi|296026795|gb|ADG77565.1| DNA polymerase III, alpha subunit [Tsukamurella paurometabola DSM 20162] Length=1093 Score = 1494 bits (3867), Expect = 0.0, Method: Compositional matrix adjust. Identities = 771/1083 (72%), Positives = 867/1083 (81%), Gaps = 5/1083 (0%) Query 1 MERVLNGK-PRHAGVPAFDADGDVPR-SRKRGAYQPPGRERVGSSVAYAELHAHSAYSFL 58 MERVL+G+ P P D GD P SRKR Y P S V YAELHAH+A+SFL Sbjct 12 MERVLSGRAPARREEPPGDG-GDSPAWSRKREPYVPGEGGPGASRVPYAELHAHTAFSFL 70 Query 59 DGASTPEELVEEAARLGLCALALTDHDGLYGAVRFAEAAAELDVRTVFGAELSLGATA-R 117 DGA+ PEE+VE+A LGL ALA+TDH+G YG VRFAEAA L V TVFGAELSL A R Sbjct 71 DGAAQPEEMVEQAHALGLTALAVTDHNGFYGVVRFAEAALGLGVPTVFGAELSLLRDAER 130 Query 118 TERPDPPGPHLLVLARGPEGYRRLSRQLAAAHLAGGEKGKPRYDFDALTEAAGGHWHILT 177 T DP G HLLVLARG EGYRRLSR +A AH+ GEKGK R+ D L E + GHWHILT Sbjct 131 TGTADPDGEHLLVLARGQEGYRRLSRAMAEAHMEAGEKGKLRFHPDRLAEWSEGHWHILT 190 Query 178 GCRKGHVRQALSQGGPAAAQRALADLVDRFTPSRVSIELTHHGHPLDDERNAALAGLAPR 237 GCRKG VR+ L GP A ALA L+DRF P RVS+ELT HG P DDERN LAG+A R Sbjct 191 GCRKGAVRRGLDAAGPDGAAGALAHLLDRFGPDRVSMELTVHGVPEDDERNHLLAGVAAR 250 Query 238 FGVGIVATTGAHFADPSRGRLAMAMAAIRARRSLDSAAGWLAPLGGAHLRSGEEMARLFA 297 GVG VATTGAHFA P + RLA +AAIRARRSLD GWL GGAHLRSG+EMA L Sbjct 251 MGVGTVATTGAHFARPDQRRLAATLAAIRARRSLDELDGWLPAAGGAHLRSGDEMALLLP 310 Query 298 WCPEAVTAAAELGERCAFGLQLIAPRLPPFDVPDGHTEDSWLRSLVMAGARERYGPPKSA 357 P A+ A EL CAF L+LIAP LPPFDVP GHTE +WLR L GA +RYGPP+S Sbjct 311 EHPGAIAGAVELAAECAFSLRLIAPNLPPFDVPAGHTEATWLRELTRRGALDRYGPPESN 370 Query 358 PRAYSQIEHELKVIAQLRFPGYFLVVHDITRFCRDNDILCQGRGSAANSAVCYALGVTAV 417 P+AY QIEHEL VI L FPGYFL+VH I FCR++DILCQGRGSAANSAVC+ALG+TAV Sbjct 371 PKAYRQIEHELNVIETLTFPGYFLIVHSIVSFCRESDILCQGRGSAANSAVCFALGITAV 430 Query 418 DPVANELLFERFLSPARDGPPDIDIDIESDQREKVIQYVYHKYGRDYAAQVANVITYRGR 477 DPV N LLFERFL+P RDGPPDID+DIESD+RE+ IQ+VY YGR YAAQVANVITYRGR Sbjct 431 DPVRNGLLFERFLAPERDGPPDIDVDIESDRREEAIQFVYRTYGRAYAAQVANVITYRGR 490 Query 478 SAVRDMARALGFSPGQQDAWSKQVSHWTGQADDV-DGIPEQVIDLATQIRNLPRHLGIHS 536 SAVRD ARALG+S GQQDAWSKQ+S + + D V DG+PE+VIDLATQI +LPRHLGIHS Sbjct 491 SAVRDTARALGYSQGQQDAWSKQISSYGWRNDPVPDGVPERVIDLATQIADLPRHLGIHS 550 Query 537 GGMVICDRPIADVCPVEWARMANRSVLQWDKDDCAAIGLVKFDLLGLGMLSALHYAKDLV 596 GGMVICDRPIADVCP EWARM +RSVLQWDKDDCAA GLVKFDLLGLGMLSALHYA+DL+ Sbjct 551 GGMVICDRPIADVCPTEWARMQDRSVLQWDKDDCAAAGLVKFDLLGLGMLSALHYAQDLL 610 Query 597 AEHKGIEVDLARLDLSEPAVYEMLARADSVGVFQVESRAQMATLPRLKPRVFYDLVVEVA 656 EHKGIEVD A+LDL++ VY ML RADSVGVFQVESRAQMATLPRLKPR FYDLVVEVA Sbjct 611 KEHKGIEVDFAQLDLTDDTVYAMLRRADSVGVFQVESRAQMATLPRLKPRTFYDLVVEVA 670 Query 657 LIRPGPIQGGSVHPYIRRRNGVDPVIYEHPSMAPALRKTLGVPLFQEQLMQLAVDCAGFS 716 LIRPGPIQGGSVHPYIRRRNG + EHPSM L +TLGVPLFQEQLMQLAVD A F+ Sbjct 671 LIRPGPIQGGSVHPYIRRRNGQEEPRVEHPSMWKTLERTLGVPLFQEQLMQLAVDVADFT 730 Query 717 AAEADQLRRAMGSKRSTERMRRLRGRFYDGMRALHGAPDEVIDRIYEKLEAFANFGFPES 776 AEADQLRRAMGSKRSTE+M +LR RFY G + LHG E+ DRI+EKL AFANFGFPES Sbjct 731 PAEADQLRRAMGSKRSTEKMEQLRERFYRGAKQLHGIEGELADRIFEKLAAFANFGFPES 790 Query 777 HALSFASLVFYSAWFKLHHPAAFCAALLRAQPMGFYSPQSLVADARRHGVAVHGPCVNAS 836 H+ SFASLVFYS+WFK +HPAAFCAALLRAQPMGFYSPQSLVADARRHGV VHGP +N S Sbjct 791 HSQSFASLVFYSSWFKCYHPAAFCAALLRAQPMGFYSPQSLVADARRHGVTVHGPDLNIS 850 Query 837 LAHATCENAGTEVRLGLGAVRYLGAELAEKLVAERTANGPFTSLPDLTSRVQLSVPQVEA 896 L A ENAG EVRLGL A+R +G ELAE++VAER A G + L DLTSRV+L+V Q EA Sbjct 851 LPWANLENAGMEVRLGLAAIRTIGDELAERIVAEREAGGIYAGLTDLTSRVELTVAQAEA 910 Query 897 LATAGALGCFGMSRREALWAAGAAATGRPDRLPGVGSSSHIPALPGMSELELAAADVWAT 956 LAT+GAL CFG RR+ALW AGAAA RPDRLPG ++ P LPGMSE ELAAADVWAT Sbjct 911 LATSGALDCFGRDRRQALWEAGAAARERPDRLPGTATAGAPPTLPGMSETELAAADVWAT 970 Query 957 GVSPDSYPTQFLRADLDAMGVLPAERLGSVSDGDRVLIAGAVTHRQRPATAQGVTFINLE 1016 V+ YPT+FLR LD +GV+PA++L S+ DGDRVL+ GAVTHRQRPATA GVTFINLE Sbjct 971 SVTVGKYPTEFLRPKLDELGVIPADQLLSLPDGDRVLVGGAVTHRQRPATAGGVTFINLE 1030 Query 1017 DETGMVNVLCTPGVWARHRKLAHTAPALLIRGQVQNASGAITVVAERMGRLTLAVGARSR 1076 DETGMVNV+C+ G+WAR+R+LA +APALLIRG++QNA GA+TVVA+R+ R+ L+V +RSR Sbjct 1031 DETGMVNVVCSQGLWARYRRLAQSAPALLIRGKLQNAEGAVTVVADRLQRMDLSVPSRSR 1090 Query 1077 DFR 1079 D++ Sbjct 1091 DWQ 1093 >gi|343926619|ref|ZP_08766117.1| error-prone DNA polymerase [Gordonia alkanivorans NBRC 16433] gi|343763371|dbj|GAA13043.1| error-prone DNA polymerase [Gordonia alkanivorans NBRC 16433] Length=1094 Score = 1464 bits (3791), Expect = 0.0, Method: Compositional matrix adjust. Identities = 765/1094 (70%), Positives = 866/1094 (80%), Gaps = 27/1094 (2%) Query 1 MERVLNGKPRHAGVP--AFDAD-----------GDVPR-SRKRGAYQPPGRERVGSSVAY 46 MERVL+G+ G P AF D GD P SRKRGAYQ R SSVAY Sbjct 13 MERVLSGRAPDGGRPGTAFGPDDSDHAMFPGDGGDSPAWSRKRGAYQAEDIARGSSSVAY 72 Query 47 AELHAHSAYSFLDGASTPEELVEEAARLGLCALALTDHDGLYGAVRFAEAAAELDVRTVF 106 AELHAHS+YSFLDGAS PEELVEEA RLGL ALA+TDHDG YG VRFAEAA E + TVF Sbjct 73 AELHAHSSYSFLDGASMPEELVEEAERLGLQALAVTDHDGFYGIVRFAEAAREFGMPTVF 132 Query 107 GAELSLGA-TARTERPDPPGPHLLVLARGPEGYRRLSRQLAAAHLAGGEKGKPRYDFDAL 165 GAELSL AR+ DPPG HLLVLAR EGYRRLSR +A AH+ GEKG RYD DAL Sbjct 133 GAELSLEPDIARSGLNDPPGEHLLVLARDGEGYRRLSRTIAEAHMVAGEKGLLRYDRDAL 192 Query 166 TEAAGGHWHILTGCRKGHVRQALSQGGPAAAQRALADLVDRFTPSRVSIELTHHGHPLDD 225 + A GHW ILTGCRKG VR+AL +GG AA+ AL ++++ + V +ELT G P DD Sbjct 193 SGAGDGHWLILTGCRKGAVRRALDRGGVPAAEIALREMIETYGHGNVVLELTAQGMPDDD 252 Query 226 ERNAALAGLAPRFGVGIVATTGAHFADPSRGRLAMAMAAIRARRSLDSAAGWLAPLGGAH 285 ERNA LAGLA R GV VATTGAHFA P R RLAMAMAA+RAR +++ AGW+ + GAH Sbjct 253 ERNAVLAGLAARAGVPTVATTGAHFAAPRRRRLAMAMAAVRARTDIETIAGWMPGVAGAH 312 Query 286 LRSGEEMARLFAWCPEAVTAAAELGERCAFGLQLIAPRLPPFDVPDGHTEDSWLRSLVMA 345 LRSG+EMARL +A+ A + CAF L LIAP LPPFDVP+G+TE SWLR L M Sbjct 313 LRSGDEMARLMPAHLDAIDNAVGIAADCAFRLGLIAPELPPFDVPEGYTEASWLRELTMT 372 Query 346 GARERYGPPKSAPRAYSQIEHELKVIAQLRFPGYFLVVHDITRFCRDNDILCQGRGSAAN 405 AR RYG P P+AY QIEHEL +I L FPGYFLVV DI FC+ NDILCQGRGSAAN Sbjct 373 RARRRYGTPVEHPQAYRQIEHELAIIETLTFPGYFLVVADIVDFCKANDILCQGRGSAAN 432 Query 406 SAVCYALGVTAVDPVANELLFERFLSPARDGPPDIDIDIESDQREKVIQYVYHKYGRDYA 465 SAVCYALG+T VDPVAN+LLFERFL+P RDGPPDID+DIESD+RE+ IQYVY +YGRD + Sbjct 433 SAVCYALGITNVDPVANKLLFERFLAPERDGPPDIDVDIESDRREEAIQYVYRRYGRDRS 492 Query 466 AQVANVITYRGRSAVRDMARALGFSPGQQDAWSKQVSHWTGQADDVDGIPEQVIDLATQI 525 AQVANVITYRG+SA+RDMARALG++PGQQDAW+K D P V DLA +I Sbjct 493 AQVANVITYRGKSAIRDMARALGYAPGQQDAWAKSP----------DAAPSDVTDLAGEI 542 Query 526 RNLPRHLGIHSGGMVICDRPIADVCPVEWARMANRSVLQWDKDDCAAIGLVKFDLLGLGM 585 +PRHLGIHSGGMVICDRPIADVCP EWARM NRSVLQWDKDDCAAIGLVKFD+LGLGM Sbjct 543 LGMPRHLGIHSGGMVICDRPIADVCPTEWARMENRSVLQWDKDDCAAIGLVKFDMLGLGM 602 Query 586 LSALHYAKDLVAEHKGIEVDLARLDLSEPAVYEMLARADSVGVFQVESRAQMATLPRLKP 645 LSALHYA DLVAEHKGIEVDLA LDL+EPAVYEML RADSVGVFQVESRAQMATLPRLKP Sbjct 603 LSALHYAIDLVAEHKGIEVDLATLDLAEPAVYEMLCRADSVGVFQVESRAQMATLPRLKP 662 Query 646 RVFYDLVVEVALIRPGPIQGGSVHPYIRRRNGVDPVIYEHPSMAPALRKTLGVPLFQEQL 705 R FYDLVVEVALIRPGPIQGGSVHP+I+RRNG +PV EHPSM AL +TLGVPLFQEQL Sbjct 663 RCFYDLVVEVALIRPGPIQGGSVHPFIKRRNGDEPVTVEHPSMHKALERTLGVPLFQEQL 722 Query 706 MQLAVDCAGFSAAEADQLRRAMGSKRSTERMRRLRGRFYDGMRALHGAPDEVIDRIYEKL 765 MQLAVD AGF A+EADQLRRAMGSKRS E+M RLR RFY GM LHG + DRI+EK+ Sbjct 723 MQLAVDVAGFDASEADQLRRAMGSKRSPEKMERLRKRFYAGMEKLHGITGDTADRIFEKM 782 Query 766 EAFANFGFPESHALSFASLVFYSAWFKLHHPAAFCAALLRAQPMGFYSPQSLVADARRHG 825 AFANFGFPESH+ SFASLVFYS+WFKLHHPAAFCAALLRAQPMGFYSPQ+LVADARRHG Sbjct 783 AAFANFGFPESHSQSFASLVFYSSWFKLHHPAAFCAALLRAQPMGFYSPQTLVADARRHG 842 Query 826 VAVHGPCVNASLAHATCENAGTEVRLGLGAVRYLGAELAEKLVAERTANGPFTSLPDLTS 885 VAVH P +NASLAHAT EN G +VRLGL VR +G E+A+++V +R A+GP+T + D++ Sbjct 843 VAVHRPDINASLAHATLENEGLDVRLGLDEVRGVGEEVAQRIV-DRRADGPYTDITDVSR 901 Query 886 RVQLSVPQVEALATAGALGCFGMSRREALWAAGAAATGRPDRLPGVGSSSHIPALPGMSE 945 R LS ++E LA AGA FG+SRR+ALW AGAAAT R D+L + S+ P LPG+S+ Sbjct 902 RAALSAKELEGLAGAGAFDGFGLSRRQALWEAGAAATVRDDQLE-LRSAGATPTLPGLSD 960 Query 946 LELAAADVWATGVSPDSYPTQFLRADLDAMGVLPAERLGSVSDGDRVLIAGAVTHRQRPA 1005 +ELAA D WATG++P SYPTQFLR LDAMGV+ A+RL SV DG RVLI GAVTHRQRPA Sbjct 961 IELAATDAWATGITPKSYPTQFLRPRLDAMGVVAADRLLSVPDGARVLIGGAVTHRQRPA 1020 Query 1006 TAQGVTFINLEDETGMVNVLCTPGVWARHRKLAHTAPALLIRGQVQNASGAITVVAERMG 1065 TA GVTFINLEDETGMVNV+C+ G+WAR+R LA TAPALL+RG+VQNA GA+TVVA+R+ Sbjct 1021 TASGVTFINLEDETGMVNVVCSVGLWARYRVLAQTAPALLVRGRVQNAEGAVTVVADRLQ 1080 Query 1066 RLTLAVGARSRDFR 1079 R+ L VG RSRD++ Sbjct 1081 RMDLRVGTRSRDWQ 1094 >gi|262201696|ref|YP_003272904.1| DNA polymerase III subunit alpha [Gordonia bronchialis DSM 43247] gi|262085043|gb|ACY21011.1| DNA polymerase III, alpha subunit [Gordonia bronchialis DSM 43247] Length=1090 Score = 1457 bits (3772), Expect = 0.0, Method: Compositional matrix adjust. Identities = 761/1088 (70%), Positives = 862/1088 (80%), Gaps = 21/1088 (1%) Query 1 MERVLNGKPRHAGVP--AF---DADGDVPRS----RKRGAYQPPGRERVGSSVAYAELHA 51 +ERVL+G+ AG P AF D GD S RKRGA++P SSV YAELHA Sbjct 13 LERVLSGRAPGAGRPGEAFGPGDNTGDGSDSPAWSRKRGAFRPDPVRPEPSSVPYAELHA 72 Query 52 HSAYSFLDGASTPEELVEEAARLGLCALALTDHDGLYGAVRFAEAAAELDVRTVFGAELS 111 HSAYSFLDGAS PEE+V EA RL L AL++TDHDG YG VRFAEAA E + TVFG+ELS Sbjct 73 HSAYSFLDGASMPEEMVTEAQRLDLRALSITDHDGFYGIVRFAEAAREFGMPTVFGSELS 132 Query 112 LG-ATARTERPDPPGPHLLVLARGPEGYRRLSRQLAAAHLAGGEKGKPRYDFDALTEAAG 170 L ART DPPG HLLVLAR EGYRRLSR +A AH+ GEKG RY+ ++L+ AAG Sbjct 133 LAHDVARTGHNDPPGEHLLVLARDSEGYRRLSRTIADAHMVAGEKGLLRYERESLSSAAG 192 Query 171 GHWHILTGCRKGHVRQALSQGGPAAAQRALADLVDRFTPSRVSIELTHHGHPLDDERNAA 230 GHW ILTGCRKG VR+AL +GG +AA+ AL DLVDRF V++ELT G P DD+RNAA Sbjct 193 GHWLILTGCRKGAVRRALDRGGASAAEVALRDLVDRFGRDDVAVELTASGLPDDDDRNAA 252 Query 231 LAGLAPRFGVGIVATTGAHFADPSRGRLAMAMAAIRARRSLDSAAGWLAPLGGAHLRSGE 290 LAG+A GV VATTGAHFA P R RLAMAMAA+RAR +D+ AGW+ + GAHL SG+ Sbjct 253 LAGVARLVGVATVATTGAHFAGPRRRRLAMAMAAVRARTDIDTIAGWMPGVAGAHLCSGD 312 Query 291 EMARLFAWCPEAVTAAAELGERCAFGLQLIAPRLPPFDVPDGHTEDSWLRSLVMAGARER 350 EMARL +A+ A +L CAF L LIAP+LPPFDVPDGHTE +WLR L M AR R Sbjct 313 EMARLLPAHRDAIDNAVQLAADCAFELGLIAPQLPPFDVPDGHTEITWLRELTMTRARRR 372 Query 351 YGPPKSAPRAYSQIEHELKVIAQLRFPGYFLVVHDITRFCRDNDILCQGRGSAANSAVCY 410 YG P P+AY QIEHEL ++ L FPGYFLVV DI FC+ NDILCQGRGSAANSAVCY Sbjct 373 YGTPAQHPQAYRQIEHELAIVETLNFPGYFLVVADIVDFCKANDILCQGRGSAANSAVCY 432 Query 411 ALGVTAVDPVANELLFERFLSPARDGPPDIDIDIESDQREKVIQYVYHKYGRDYAAQVAN 470 ALG+T VDPVAN+LLFERFLSP RDGPPDID+DIESD+RE+ IQYVY +YGRDY+AQVAN Sbjct 433 ALGITNVDPVANKLLFERFLSPERDGPPDIDVDIESDRREEAIQYVYRRYGRDYSAQVAN 492 Query 471 VITYRGRSAVRDMARALGFSPGQQDAWSKQVSHWTGQADDVDGIPEQVIDLATQIRNLPR 530 VITYRGRSAVRDMARALG+ GQQDAWS+ D P +V DLA +I +PR Sbjct 493 VITYRGRSAVRDMARALGYGTGQQDAWSRLP----------DEAPPEVADLAGEILGMPR 542 Query 531 HLGIHSGGMVICDRPIADVCPVEWARMANRSVLQWDKDDCAAIGLVKFDLLGLGMLSALH 590 HLGIHSGGMVICDRPIADVCP EWARM NRSVLQWDKDDCAAIGLVKFDLLGLGMLSALH Sbjct 543 HLGIHSGGMVICDRPIADVCPTEWARMENRSVLQWDKDDCAAIGLVKFDLLGLGMLSALH 602 Query 591 YAKDLVAEHKGIEVDLARLDLSEPAVYEMLARADSVGVFQVESRAQMATLPRLKPRVFYD 650 YA DLVAEHKG+ VDLA LDLSEPAVYEML RADSVGVFQVESRAQMATLPRL+PR FYD Sbjct 603 YAIDLVAEHKGLHVDLAELDLSEPAVYEMLCRADSVGVFQVESRAQMATLPRLRPRKFYD 662 Query 651 LVVEVALIRPGPIQGGSVHPYIRRRNGVDPVIYEHPSMAPALRKTLGVPLFQEQLMQLAV 710 LVVEVALIRPGPIQGGSVHPYIRRR+G + EHPSM AL +TLGVPLFQEQLMQLAV Sbjct 663 LVVEVALIRPGPIQGGSVHPYIRRRHGQEKPTVEHPSMHKALERTLGVPLFQEQLMQLAV 722 Query 711 DCAGFSAAEADQLRRAMGSKRSTERMRRLRGRFYDGMRALHGAPDEVIDRIYEKLEAFAN 770 D AGF AA ADQLRRAMGSKRS ERM RLR RFYDGMR LHG EV DRI+EK+ AFAN Sbjct 723 DVAGFDAAGADQLRRAMGSKRSPERMERLRQRFYDGMRDLHGITGEVADRIFEKMSAFAN 782 Query 771 FGFPESHALSFASLVFYSAWFKLHHPAAFCAALLRAQPMGFYSPQSLVADARRHGVAVHG 830 FGFPESH+ SFASLVFYS+WFKLHHPAAFCAALLRAQPMGFYSPQSLVADARRHGV VH Sbjct 783 FGFPESHSQSFASLVFYSSWFKLHHPAAFCAALLRAQPMGFYSPQSLVADARRHGVRVHR 842 Query 831 PCVNASLAHATCENAGTEVRLGLGAVRYLGAELAEKLVAERTANGPFTSLPDLTSRVQLS 890 P +N SL HAT EN G EVRLGL VR +G E+AE++V R A+GP+ + D++ R L+ Sbjct 843 PDINVSLPHATLENEGLEVRLGLDGVRGVGTEVAERIVERRDADGPYRDITDVSRRAGLT 902 Query 891 VPQVEALATAGALGCFGMSRREALWAAGAAATGRPDRLPGVGSSSHIPALPGMSELELAA 950 ++E LA AGA FG+SRR+ALW AGAAAT R D+LP + S++ P LPG+S++ELAA Sbjct 903 TRELEGLAGAGAFDVFGVSRRQALWEAGAAATVRDDQLP-LASAATTPTLPGLSDVELAA 961 Query 951 ADVWATGVSPDSYPTQFLRADLDAMGVLPAERLGSVSDGDRVLIAGAVTHRQRPATAQGV 1010 D WATG++P SYPTQFLR L AMGVL AE L SV DG RV++ GAVTHRQRPATA GV Sbjct 962 TDAWATGITPTSYPTQFLRPRLRAMGVLAAETLLSVPDGSRVVVGGAVTHRQRPATASGV 1021 Query 1011 TFINLEDETGMVNVLCTPGVWARHRKLAHTAPALLIRGQVQNASGAITVVAERMGRLTLA 1070 TFINLEDETGMVNV+C+ G+W+++R LAH+A AL++RG+VQNA GA+TVVA+R+ R+ L Sbjct 1022 TFINLEDETGMVNVVCSVGLWSKYRALAHSASALIVRGRVQNAEGAVTVVADRLQRMDLR 1081 Query 1071 VGARSRDF 1078 VG RSRD+ Sbjct 1082 VGTRSRDW 1089 >gi|307086146|ref|ZP_07495259.1| putative PHP domain protein [Mycobacterium tuberculosis SUMu012] gi|308364390|gb|EFP53241.1| putative PHP domain protein [Mycobacterium tuberculosis SUMu012] Length=716 Score = 1454 bits (3763), Expect = 0.0, Method: Compositional matrix adjust. Identities = 716/716 (100%), Positives = 716/716 (100%), Gaps = 0/716 (0%) Query 71 AARLGLCALALTDHDGLYGAVRFAEAAAELDVRTVFGAELSLGATARTERPDPPGPHLLV 130 AARLGLCALALTDHDGLYGAVRFAEAAAELDVRTVFGAELSLGATARTERPDPPGPHLLV Sbjct 1 AARLGLCALALTDHDGLYGAVRFAEAAAELDVRTVFGAELSLGATARTERPDPPGPHLLV 60 Query 131 LARGPEGYRRLSRQLAAAHLAGGEKGKPRYDFDALTEAAGGHWHILTGCRKGHVRQALSQ 190 LARGPEGYRRLSRQLAAAHLAGGEKGKPRYDFDALTEAAGGHWHILTGCRKGHVRQALSQ Sbjct 61 LARGPEGYRRLSRQLAAAHLAGGEKGKPRYDFDALTEAAGGHWHILTGCRKGHVRQALSQ 120 Query 191 GGPAAAQRALADLVDRFTPSRVSIELTHHGHPLDDERNAALAGLAPRFGVGIVATTGAHF 250 GGPAAAQRALADLVDRFTPSRVSIELTHHGHPLDDERNAALAGLAPRFGVGIVATTGAHF Sbjct 121 GGPAAAQRALADLVDRFTPSRVSIELTHHGHPLDDERNAALAGLAPRFGVGIVATTGAHF 180 Query 251 ADPSRGRLAMAMAAIRARRSLDSAAGWLAPLGGAHLRSGEEMARLFAWCPEAVTAAAELG 310 ADPSRGRLAMAMAAIRARRSLDSAAGWLAPLGGAHLRSGEEMARLFAWCPEAVTAAAELG Sbjct 181 ADPSRGRLAMAMAAIRARRSLDSAAGWLAPLGGAHLRSGEEMARLFAWCPEAVTAAAELG 240 Query 311 ERCAFGLQLIAPRLPPFDVPDGHTEDSWLRSLVMAGARERYGPPKSAPRAYSQIEHELKV 370 ERCAFGLQLIAPRLPPFDVPDGHTEDSWLRSLVMAGARERYGPPKSAPRAYSQIEHELKV Sbjct 241 ERCAFGLQLIAPRLPPFDVPDGHTEDSWLRSLVMAGARERYGPPKSAPRAYSQIEHELKV 300 Query 371 IAQLRFPGYFLVVHDITRFCRDNDILCQGRGSAANSAVCYALGVTAVDPVANELLFERFL 430 IAQLRFPGYFLVVHDITRFCRDNDILCQGRGSAANSAVCYALGVTAVDPVANELLFERFL Sbjct 301 IAQLRFPGYFLVVHDITRFCRDNDILCQGRGSAANSAVCYALGVTAVDPVANELLFERFL 360 Query 431 SPARDGPPDIDIDIESDQREKVIQYVYHKYGRDYAAQVANVITYRGRSAVRDMARALGFS 490 SPARDGPPDIDIDIESDQREKVIQYVYHKYGRDYAAQVANVITYRGRSAVRDMARALGFS Sbjct 361 SPARDGPPDIDIDIESDQREKVIQYVYHKYGRDYAAQVANVITYRGRSAVRDMARALGFS 420 Query 491 PGQQDAWSKQVSHWTGQADDVDGIPEQVIDLATQIRNLPRHLGIHSGGMVICDRPIADVC 550 PGQQDAWSKQVSHWTGQADDVDGIPEQVIDLATQIRNLPRHLGIHSGGMVICDRPIADVC Sbjct 421 PGQQDAWSKQVSHWTGQADDVDGIPEQVIDLATQIRNLPRHLGIHSGGMVICDRPIADVC 480 Query 551 PVEWARMANRSVLQWDKDDCAAIGLVKFDLLGLGMLSALHYAKDLVAEHKGIEVDLARLD 610 PVEWARMANRSVLQWDKDDCAAIGLVKFDLLGLGMLSALHYAKDLVAEHKGIEVDLARLD Sbjct 481 PVEWARMANRSVLQWDKDDCAAIGLVKFDLLGLGMLSALHYAKDLVAEHKGIEVDLARLD 540 Query 611 LSEPAVYEMLARADSVGVFQVESRAQMATLPRLKPRVFYDLVVEVALIRPGPIQGGSVHP 670 LSEPAVYEMLARADSVGVFQVESRAQMATLPRLKPRVFYDLVVEVALIRPGPIQGGSVHP Sbjct 541 LSEPAVYEMLARADSVGVFQVESRAQMATLPRLKPRVFYDLVVEVALIRPGPIQGGSVHP 600 Query 671 YIRRRNGVDPVIYEHPSMAPALRKTLGVPLFQEQLMQLAVDCAGFSAAEADQLRRAMGSK 730 YIRRRNGVDPVIYEHPSMAPALRKTLGVPLFQEQLMQLAVDCAGFSAAEADQLRRAMGSK Sbjct 601 YIRRRNGVDPVIYEHPSMAPALRKTLGVPLFQEQLMQLAVDCAGFSAAEADQLRRAMGSK 660 Query 731 RSTERMRRLRGRFYDGMRALHGAPDEVIDRIYEKLEAFANFGFPESHALSFASLVF 786 RSTERMRRLRGRFYDGMRALHGAPDEVIDRIYEKLEAFANFGFPESHALSFASLVF Sbjct 661 RSTERMRRLRGRFYDGMRALHGAPDEVIDRIYEKLEAFANFGFPESHALSFASLVF 716 >gi|326381920|ref|ZP_08203613.1| error-prone DNA polymerase [Gordonia neofelifaecis NRRL B-59395] gi|326199346|gb|EGD56527.1| error-prone DNA polymerase [Gordonia neofelifaecis NRRL B-59395] Length=1096 Score = 1400 bits (3623), Expect = 0.0, Method: Compositional matrix adjust. Identities = 742/1094 (68%), Positives = 844/1094 (78%), Gaps = 27/1094 (2%) Query 1 MERVLNGKPRHAG-------VPAFDADGDVPR-------SRKRGAYQPPGRERVGSSVAY 46 MERVL+G+ R G P F+ G SRKRG Y+ E S+V Y Sbjct 13 MERVLSGRARSRGDRPGETFPPTFNGAGPPGDGGDSPAWSRKRGPYEAADIEFGTSTVPY 72 Query 47 AELHAHSAYSFLDGASTPEELVEEAARLGLCALALTDHDGLYGAVRFAEAAAELDVRTVF 106 AELHAHSAYSFLDGAS PE +VEEA RLGL LALTDHDG YG VRFAEAA E + TVF Sbjct 73 AELHAHSAYSFLDGASMPEAMVEEAQRLGLRGLALTDHDGFYGVVRFAEAAREFGMPTVF 132 Query 107 GAELSLG-ATARTERPDPPGPHLLVLARGPEGYRRLSRQLAAAHLAGGEKGKPRYDFDAL 165 GAELSL +AR DPPG HL VLAR EGYRRLSR +A AH+ GGEKG RYD A+ Sbjct 133 GAELSLERDSARAGAVDPPGEHLQVLARRAEGYRRLSRVIADAHMTGGEKGLLRYDAAAI 192 Query 166 TEAAG-GHWHILTGCRKGHVRQALSQGGPAAAQRALADLVDRFTPSRVSIELTHHGHPLD 224 TE A G W ILTGCRKG VR+AL +GG AA AL +++DRF V++EL+ D Sbjct 193 TEHAAAGDWLILTGCRKGAVRRALDRGGKRAAGAALGEMIDRFGIGNVAVELSPGPGSDD 252 Query 225 DERNAALAGLAPRFGVGIVATTGAHFADPSRGRLAMAMAAIRARRSLDSAAGWLAPLGGA 284 DERNA LA LA + V VATTGAHFA P GRLA AMAAIRAR + + GW+ +GGA Sbjct 253 DERNAILASLAAQHRVPTVATTGAHFAAPENGRLATAMAAIRARTDITTIDGWMPGVGGA 312 Query 285 HLRSGEEMARLFAWCPEAVTAAAELGERCAFGLQLIAPRLPPFDVPDGHTEDSWLRSLVM 344 HLR+G+EM RL EA+ A + CAF L+LIAP LPPFDVPDGH+E +WLR L Sbjct 313 HLRNGDEMLRLMPAHREAIDNAVAFADECAFSLKLIAPSLPPFDVPDGHSESTWLRELTE 372 Query 345 AGARERYGPPKSAPRAYSQIEHELKVIAQLRFPGYFLVVHDITRFCRDNDILCQGRGSAA 404 GAR RYG + P AY QI+HEL +I L FPGYFLVVHDI FC++NDILCQGRGSAA Sbjct 373 RGARGRYGTREQRPDAYRQIDHELAIIEALTFPGYFLVVHDIVSFCKENDILCQGRGSAA 432 Query 405 NSAVCYALGVTAVDPVANELLFERFLSPARDGPPDIDIDIESDQREKVIQYVYHKYGRDY 464 NSAVCYALG+T VDPVAN LLFERFLSP RDGPPDID+DIESD+RE+ IQ+VY K+GR + Sbjct 433 NSAVCYALGITNVDPVANHLLFERFLSPERDGPPDIDVDIESDRREEAIQHVYAKHGRSH 492 Query 465 AAQVANVITYRGRSAVRDMARALGFSPGQQDAWSKQVSHWTGQADDVDGIPEQVIDLATQ 524 +AQVANVITYRGRSAVRD ARALG++PGQQDAWSK D P+ V ++A Q Sbjct 493 SAQVANVITYRGRSAVRDTARALGYAPGQQDAWSKIP----------DSAPDDVREMAAQ 542 Query 525 IRNLPRHLGIHSGGMVICDRPIADVCPVEWARMANRSVLQWDKDDCAAIGLVKFDLLGLG 584 I +LPRHLGIHSGGMVICDRPIADVCP EWARMA RSVLQWDKDDCAAIGLVKFDLLGLG Sbjct 543 ISSLPRHLGIHSGGMVICDRPIADVCPTEWARMAGRSVLQWDKDDCAAIGLVKFDLLGLG 602 Query 585 MLSALHYAKDLVAEHKGIEVDLARLDLSEPAVYEMLARADSVGVFQVESRAQMATLPRLK 644 MLSALHY DLV EHKG+ VDLARLDL+E AVY+ML RADSVGVFQVESRAQMATLPRLK Sbjct 603 MLSALHYMIDLVDEHKGVTVDLARLDLTEEAVYDMLCRADSVGVFQVESRAQMATLPRLK 662 Query 645 PRVFYDLVVEVALIRPGPIQGGSVHPYIRRRNGVDPVIYEHPSMAPALRKTLGVPLFQEQ 704 PR FYDLVVEVALIRPGPIQGGSVHPYIRRRNG++ +HPSM AL +TLG+PLFQEQ Sbjct 663 PRTFYDLVVEVALIRPGPIQGGSVHPYIRRRNGLEAPNCDHPSMEDALGRTLGIPLFQEQ 722 Query 705 LMQLAVDCAGFSAAEADQLRRAMGSKRSTERMRRLRGRFYDGMRALHGAPDEVIDRIYEK 764 LMQ+A D AGF AAEADQLRRAMGSKRS E+M+RLR RFYDGMR +G ++ DRIYEK Sbjct 723 LMQVARDVAGFGAAEADQLRRAMGSKRSPEKMQRLRQRFYDGMRETNGITGDLADRIYEK 782 Query 765 LEAFANFGFPESHALSFASLVFYSAWFKLHHPAAFCAALLRAQPMGFYSPQSLVADARRH 824 + AFANFGFPESH+ SFASLVFYSAWFKLHHPAAFCAALLRAQPMGFYSPQSLVADARRH Sbjct 783 MAAFANFGFPESHSQSFASLVFYSAWFKLHHPAAFCAALLRAQPMGFYSPQSLVADARRH 842 Query 825 GVAVHGPCVNASLAHATCENAGTEVRLGLGAVRYLGAELAEKLVAERTANGPFTSLPDLT 884 GV VH P VN SL++A EN G +VR+GLGA+R L E+A ++V ER+A GPF S+ DL+ Sbjct 843 GVQVHRPDVNLSLSYAGLENGGLDVRIGLGAIRGLSDEVATRIVEERSAGGPFVSVADLS 902 Query 885 SRVQLSVPQVEALATAGALGCFGMSRREALWAAGAAATGRPDRLPGVGSSSHIPALPGMS 944 RV+ + Q+EA+ATAGA G RR ALW AGAAA R D+L V S P LPGMS Sbjct 903 RRVEATTAQLEAIATAGAFESLGRDRRAALWEAGAAAGLRNDQL-DVTSPRGAPTLPGMS 961 Query 945 ELELAAADVWATGVSPDSYPTQFLRADLDAMGVLPAERLGSVSDGDRVLIAGAVTHRQRP 1004 E+EL D +TGVSP +YPT++LR LDAMGV+PA+RL SV+DG RVL+ GAVTHRQRP Sbjct 962 EVELTTVDALSTGVSPRAYPTEYLRPRLDAMGVVPADRLLSVADGSRVLVGGAVTHRQRP 1021 Query 1005 ATAQGVTFINLEDETGMVNVLCTPGVWARHRKLAHTAPALLIRGQVQNASGAITVVAERM 1064 ATA GVTF+NLEDETGMVNV+C+ G+WAR+R LA TA ALLIRG+VQNA GA+TVVA+R+ Sbjct 1022 ATASGVTFVNLEDETGMVNVVCSVGLWARYRTLAQTASALLIRGRVQNAEGAVTVVADRL 1081 Query 1065 GRLTLAVGARSRDF 1078 +L L VG RSRD+ Sbjct 1082 QKLDLKVGTRSRDW 1095 >gi|134103090|ref|YP_001108751.1| error-prone DNA polymerase [Saccharopolyspora erythraea NRRL 2338] gi|291003967|ref|ZP_06561940.1| error-prone DNA polymerase [Saccharopolyspora erythraea NRRL 2338] gi|133915713|emb|CAM05826.1| DNA polymerase III, alpha subunit, putative [Saccharopolyspora erythraea NRRL 2338] Length=1056 Score = 1366 bits (3536), Expect = 0.0, Method: Compositional matrix adjust. Identities = 710/1042 (69%), Positives = 814/1042 (79%), Gaps = 8/1042 (0%) Query 43 SVAYAELHAHSAYSFLDGASTPEELVEEAARLGLCALALTDHDGLYGAVRFAEAAAELDV 102 +V YAELHAHS +SFLDGAS PEELV E+ARLGL A+ALTDHDG+YG VRF+EAAAE V Sbjct 16 AVPYAELHAHSNFSFLDGASHPEELVAESARLGLEAIALTDHDGMYGVVRFSEAAAEHGV 75 Query 103 RTVFGAELSLGATA-RTERPDPPGPHLLVLARGPEGYRRLSRQLAAAHLAGGEKGKPRYD 161 RTVFGAELSLG TA +T PDP G HLLVLAR P GY RL R++++A LAG EKG+P Y Sbjct 76 RTVFGAELSLGLTAAQTGVPDPEGNHLLVLARDPGGYARLCREISSAQLAGQEKGRPTYR 135 Query 162 FDALTEAAGGHWHILTGCRKGHVRQALSQGGPAAAQRALADLVDRFTPSRVSIELTHHGH 221 + L EAA HW +LTGCRKG VR AL++GGPAAA L LV F V++ELT Sbjct 136 LEQLAEAAEDHWLVLTGCRKGAVRSALAEGGPAAAAAELDRLVALFGGENVAVELTDQDL 195 Query 222 PLDDERNAALAGLAPRFGVGIVATTGAHFADPSRGRLAMAMAAIRARRSLDSAAGWLAPL 281 P D ERN L LA G+ VAT GAHFA P GR+A +AAIRARR LD GWL Sbjct 196 PTDSERNDVLFALARDAGLPAVATNGAHFAGPWNGRMASVVAAIRARRGLDEMDGWLPAW 255 Query 282 GGAHLRSGEEMARLFAWCPEAVTAAAELGERCAFGLQLIAPRLPPFDVPDGHTEDSWLRS 341 G HLRSGEEMA FA P AV AA LG CAF L+L+APRLPPFDVP+G TE WLR Sbjct 256 AGNHLRSGEEMAERFARYPGAVETAARLGRECAFDLRLVAPRLPPFDVPEGRTEAEWLRE 315 Query 342 LVMAGARERYGPPKSAPRAYSQIEHELKVIAQLRFPGYFLVVHDITRFCRDNDILCQGRG 401 L GA RYG P+ P AY+QIEHEL VI +L FPGYFLVVHDI FC + ILCQGRG Sbjct 316 LTYRGALRRYGLPQDNPAAYAQIEHELAVIEKLDFPGYFLVVHDIVSFCGEMGILCQGRG 375 Query 402 SAANSAVCYALGVTAVDPVANELLFERFLSPARDGPPDIDIDIESDQREKVIQYVYHKYG 461 SAANSAVC+AL +T DPV +LLFERFL+P RDGPPDID+DIESD+RE+ IQYVY KYG Sbjct 376 SAANSAVCFALRITNADPVRYDLLFERFLAPERDGPPDIDLDIESDRREEAIQYVYRKYG 435 Query 462 RDYAAQVANVITYRGRSAVRDMARALGFSPGQQDAWSKQVSHWTGQADDVDGIPEQVIDL 521 R +AAQVANVI+YR +SAVRD+ARALG+SPGQQDAWSKQ+ HW DD + +P+QV +L Sbjct 436 RTHAAQVANVISYRPKSAVRDVARALGYSPGQQDAWSKQIEHWGPLPDDGE-VPDQVREL 494 Query 522 ATQIRNLPRHLGIHSGGMVICDRPIADVCPVEWARMANRSVLQWDKDDCAAIGLVKFDLL 581 A ++ PRHLGIHSGGMVIC +P+++VCPVEWARM R+VLQWDKDDCA++GLVKFDLL Sbjct 495 AGELMGYPRHLGIHSGGMVICHQPVSEVCPVEWARMPGRTVLQWDKDDCASVGLVKFDLL 554 Query 582 GLGMLSALHYAKDLVAEHKGIEVDLARLDLSEPAVYEMLARADSVGVFQVESRAQMATLP 641 GLGMLSALHYA DL EH GIEVDL LDL++ VY ML RAD+VGVFQVESRAQ+ATLP Sbjct 555 GLGMLSALHYAIDLAREHHGIEVDLGELDLADDEVYAMLRRADAVGVFQVESRAQLATLP 614 Query 642 RLKPRVFYDLVVEVALIRPGPIQGGSVHPYIRRRNGVDPVIYEHPSMAPALRKTLGVPLF 701 RLKPR FYDLVVEVALIRPGPIQGGSVHPYIRRRNG + YEHP MA AL KTLGVPLF Sbjct 615 RLKPRKFYDLVVEVALIRPGPIQGGSVHPYIRRRNGEEDWDYEHPLMAAALEKTLGVPLF 674 Query 702 QEQLMQLAVDCAGFSAAEADQLRRAMGSKRSTERMRRLRGRFYDGMRALHGAPDEVIDRI 761 QEQLMQLAVD AGFSA EAD+LRRAMGSKRS ERM RLRGR ++GM A++G E+ +RI Sbjct 675 QEQLMQLAVDIAGFSAGEADELRRAMGSKRSEERMARLRGRLFEGM-AVNGITGELAERI 733 Query 762 YEKLEAFANFGFPESHALSFASLVFYSAWFKLHHPAAFCAALLRAQPMGFYSPQSLVADA 821 Y++L AFANFGFPESHALSFA LVF S+WFK ++PA FCAALL+AQPMGFYSPQSLVADA Sbjct 734 YQQLLAFANFGFPESHALSFAVLVFASSWFKRYYPAVFCAALLKAQPMGFYSPQSLVADA 793 Query 822 RRHGVAVHGPCVNASLAHATCE-----NAGTEVRLGLGAVRYLGAELAEKLVAERTANGP 876 RRHGV VHGP VNAS A E G VRLGL +VR LG +AE+LVAERT NGP Sbjct 794 RRHGVRVHGPDVNASRGQADLEPDAESEGGQAVRLGLASVRTLGDSVAEQLVAERTENGP 853 Query 877 FTSLPDLTSRVQLSVPQVEALATAGALGCFGMSRREALWAAGAAATGRPDRLPGVGSSSH 936 +T + DL+ R+ L+ Q+EALATAGA GCFG+SRREALW A AAA RPDRLPG S+ Sbjct 854 YTGMADLSRRMSLNAAQMEALATAGAFGCFGLSRREALWNAAAAAGDRPDRLPGTTVSAD 913 Query 937 IPALPGMSELELAAADVWATGVSPDSYPTQFLRADLDAMGVLPAERLGSVSDGDRVLIAG 996 P LPGM +ELAAADVWATG+SPDSYP QFLR+ L MG L A L V +G+RVL+ G Sbjct 914 APPLPGMDGVELAAADVWATGISPDSYPLQFLRSRLGEMGALSAADLSEVDNGERVLVGG 973 Query 997 AVTHRQRPATAQGVTFINLEDETGMVNVLCTPGVWARHRKLAHTAPALLIRGQVQNASGA 1056 AVTHRQRPATA GVTF+NLEDETGM+NV+CTPG+WAR+RK+A T+ ALL+RG ++ A G Sbjct 974 AVTHRQRPATAGGVTFLNLEDETGMINVVCTPGLWARYRKIARTSAALLVRGTIECAEGV 1033 Query 1057 ITVVAERMGRLTLAVGARSRDF 1078 I + A+R+ L + V + SRDF Sbjct 1034 INLRADRLQHLDMRVPSTSRDF 1055 >gi|258653321|ref|YP_003202477.1| error-prone DNA polymerase [Nakamurella multipartita DSM 44233] gi|258556546|gb|ACV79488.1| DNA polymerase III, alpha subunit [Nakamurella multipartita DSM 44233] Length=1092 Score = 1309 bits (3387), Expect = 0.0, Method: Compositional matrix adjust. Identities = 700/1043 (68%), Positives = 806/1043 (78%), Gaps = 6/1043 (0%) Query 42 SSVAYAELHAHSAYSFLDGASTPEELVEEAARLGLCALALTDHDGLYGAVRFAEAAAELD 101 ++V YAELH HSA+SFLDGASTPE+LV EA RLGL ALA+TDHDGLYG VRFAEAA E Sbjct 51 TAVPYAELHCHSAFSFLDGASTPEQLVAEAVRLGLEALAITDHDGLYGIVRFAEAAREAG 110 Query 102 VRTVFGAELSLG-ATARTERPDPPGPHLLVLARGPEGYRRLSRQLAAAHLAGGEKGKPRY 160 +RT++GAELSLG + PDP G HLLVLARG EGY RLS Q++ A LAGG KG+P Y Sbjct 111 LRTLYGAELSLGLPEPQLGVPDPVGEHLLVLARGQEGYHRLSTQISRAQLAGGAKGRPVY 170 Query 161 DFDALTEAAGGHWHILTGCRKGHVRQALSQGGPAAAQRALADLVDRFTPSRVSIELTHHG 220 D D L +AAGGHW ILTGCRKG VR+AL + GPA A L L+DRF V +ELT Sbjct 171 DLDELADAAGGHWLILTGCRKGSVRRALQRHGPARAAEELRALMDRFGRDNVVVELTTSL 230 Query 221 HPLDDERNAALAGLAPRFGVGIVATTGAHFADPSRGRLAMAMAAIRARRSLDSAAGWLAP 280 P DDE N ALA LA + IVATT AH+A P+ GR+A AMAA+RARRSL+ A +L Sbjct 231 APTDDEDNDALAALAAELDLPIVATTAAHYATPAEGRIAAAMAAVRARRSLEEADPYLPA 290 Query 281 LGGAHLRSGEEMARLFAWCPEAVTAAAELGERCAFGLQLIAPRLPPFDVPDGHTEDSWLR 340 G+HLRSG EMA LFA P AV AA +G C+F L+L+AP+LPP+DVP GH E+S LR Sbjct 291 GPGSHLRSGAEMAALFARYPAAVPTAAAIGRECSFDLRLLAPKLPPYDVPPGHDENSHLR 350 Query 341 SLVMAGARERYGPPKSAPRAYSQIEHELKVIAQLRFPGYFLVVHDITRFCRDNDILCQGR 400 L +AGA RYG P P AY+QIE EL +IA+L FPGYFL+V+DI FCR +DILCQGR Sbjct 351 QLTLAGAARRYGSPDDRPDAYAQIEKELGIIARLDFPGYFLIVNDIVDFCRRSDILCQGR 410 Query 401 GSAANSAVCYALGVTAVDPVANELLFERFLSPARDGPPDIDIDIESDQREKVIQYVYHKY 460 GSAANSAVCYALG+TAVD V ELLFERFL+P RDGPPDID+DIESD+RE+VIQYV+ Y Sbjct 411 GSAANSAVCYALGITAVDAVRYELLFERFLAPERDGPPDIDVDIESDRREEVIQYVFATY 470 Query 461 GRDYAAQVANVITYRGRSAVRDMARALGFSPGQQDAWSKQVSHWTGQA-DDVDGIPEQVI 519 GRD AAQVANV TYR R AVRDMA+ALG SPGQQDA+SKQ+ W A D GIP V+ Sbjct 471 GRDKAAQVANVNTYRPRMAVRDMAKALGHSPGQQDAYSKQLDGWVPLAGQDASGIPADVL 530 Query 520 DLATQIRNLPRHLGIHSGGMVICDRPIADVCPVEWARMANRSVLQWDKDDCAAIGLVKFD 579 LA +I++ PRHL IHSGGMVICDRP+A VCPVEWARM NRSVLQWDKDDCAA+GLVKFD Sbjct 531 ALAHRIQDYPRHLSIHSGGMVICDRPVASVCPVEWARMENRSVLQWDKDDCAAMGLVKFD 590 Query 580 LLGLGMLSALHYAKDLVAEHKGIEVDLARLDLSEPAVYEMLARADSVGVFQVESRAQMAT 639 LLGLGMLSALHYA DL+ EH+G+E+D A+LDL EPAVYEML RADSVGVFQVESRAQMAT Sbjct 591 LLGLGMLSALHYAVDLIREHEGLEIDFAQLDLEEPAVYEMLQRADSVGVFQVESRAQMAT 650 Query 640 LPRLKPRVFYDLVVEVALIRPGPIQGGSVHPYIRRRNGVDPVIYEHPSMAPALRKTLGVP 699 LPRLKPR FYDLVVEVALIRPGPIQG +VHPYIRRRNG + V Y+HP M +L KTLG+P Sbjct 651 LPRLKPRTFYDLVVEVALIRPGPIQGNAVHPYIRRRNGQEEVTYDHPVMEKSLAKTLGIP 710 Query 700 LFQEQLMQLAVDCAGFSAAEADQLRRAMGSKRSTERMRRLRGRFYDGMRALHGAPDEVID 759 LFQEQLMQLAVD AGF A EADQLRRAMG+KRS +M +L+ R YDGMR HG V D Sbjct 711 LFQEQLMQLAVDVAGFDAGEADQLRRAMGAKRSKGKMEKLKARLYDGMRERHGITGPVAD 770 Query 760 RIYEKLEAFANFGFPESHALSFASLVFYSAWFKLHHPAAFCAALLRAQPMGFYSPQSLVA 819 RIYE+L AFANFGF ESHALSFA+LVFYSAW KLHHPAAFCAALLRAQPMGFYSPQSLVA Sbjct 771 RIYERLLAFANFGFAESHALSFAALVFYSAWLKLHHPAAFCAALLRAQPMGFYSPQSLVA 830 Query 820 DARRHGVAVHGPCVNASLAHATCE---NAGTEVRLGLGAVRYLGAELAEKLVAERTANGP 876 DARRHGV++ P +NAS AHA E + VRLGL VR +G ELA ++VA R G Sbjct 831 DARRHGVSIRRPDINASRAHADLEPGPDGRPAVRLGLDEVRTIGDELAARIVARRPTEG- 889 Query 877 FTSLPDLTSRVQLSVPQVEALATAGALGCFGMSRREALWAAGAAATGRPDRLPGVGSSSH 936 + SL +LT V L+ PQ EALATAGAL +RR ALWAAGAAA R L G Sbjct 890 YRSLDELTRTVTLTAPQAEALATAGALDTLVGTRRHALWAAGAAAGDRAGTLAGSVVGLD 949 Query 937 IPALPGMSELELAAADVWATGVSPDSYPTQFLRADLDAMGVLPAERLGSVSDGDRVLIAG 996 PALPGMS++EL AD+WATG+SP +YPT+F R LDA GV A L + G RVL+AG Sbjct 950 APALPGMSDIELTVADIWATGISPQTYPTEFSRDQLDAWGVKTAAALKDTAHGTRVLVAG 1009 Query 997 AVTHRQRPATAQGVTFINLEDETGMVNVLCTPGVWARHRKLAHTAPALLIRGQVQNASGA 1056 VTHRQRPATA GV FINLEDETGM+NV+C+ G+WA+++++A +PALL+RG V+ A GA Sbjct 1010 VVTHRQRPATASGVIFINLEDETGMLNVICSVGLWAKYKQIARGSPALLVRGVVERAGGA 1069 Query 1057 ITVVAERMGRLTLAVGARSRDFR 1079 I++VA+R+ R+ L SRDFR Sbjct 1070 ISIVADRIARVNLIAATPSRDFR 1092 >gi|319948757|ref|ZP_08022877.1| error-prone DNA polymerase [Dietzia cinnamea P4] gi|319437590|gb|EFV92590.1| error-prone DNA polymerase [Dietzia cinnamea P4] Length=1049 Score = 1302 bits (3370), Expect = 0.0, Method: Compositional matrix adjust. Identities = 694/1058 (66%), Positives = 811/1058 (77%), Gaps = 35/1058 (3%) Query 46 YAELHAHSAYSFLDGASTPEELVEEAARLGLCALALTDHDGLYGAVRFAEAAAELDVRTV 105 YAELHAH+A+SFLDGAS+PE + E AA LGL ALA+TDHDGLYG VRFAEAA+EL + TV Sbjct 3 YAELHAHTAFSFLDGASSPEAMAEAAAELGLTALAITDHDGLYGVVRFAEAASELGLATV 62 Query 106 FGAELSLGATARTERPDPPGPHLLVLARGPEGYRRLSRQLAAAHLAGGEKGKPRYDFDAL 165 FGAELSL P G HLLVLARG EGYRRLSR +A AHL GG KG+PRY+ L Sbjct 63 FGAELSL----------PGGEHLLVLARGQEGYRRLSRAIARAHLRGGAKGEPRYEITEL 112 Query 166 TEAAGGHWHILTGCRKGHVRQALSQGGPA-------AAQRALADLVDRFTPSRVSIELTH 218 EAAGGHW++LTGCR+G VR+AL +GG AA+ AL LV+ F RV +ELT Sbjct 113 AEAAGGHWYVLTGCRRGRVRRALERGGTGGPDFDTEAARTALEQLVELFGRDRVVVELTC 172 Query 219 HGHPLDDERNAALAGLAPRFGVGIVATTGAHFADPSRGRLAMAMAAIRARRSLDSAAGWL 278 HG P D ER ALAGLA R G+ +VATT AH A P RLA MAA+ AR +L++ A L Sbjct 173 HGVPEDTERCDALAGLAARAGLPVVATTAAHCAGPEGARLASVMAALGARDALETHAAHL 232 Query 279 APLGGAHLRSGEEMARLFAWCPEAVTAAAELGERCAFGLQLIAPRLPPFDVPDGHTEDSW 338 GGAHLRSGEEMA LF P+AV A LG CAF L+LIAP+LPPFDVP+GHTED+ Sbjct 233 PAAGGAHLRSGEEMADLFDRWPDAVAGADRLGRECAFDLRLIAPQLPPFDVPEGHTEDTM 292 Query 339 LRSLVMAGARERYGPPKSAPRAYSQIEHELKVIAQLRFPGYFLVVHDITRFCRDNDILCQ 398 L L AGA RYG + P AY+QI ELKVIA+L FPGYFLVVHDI FCR ILCQ Sbjct 293 LAELAYAGAARRYGTREEMPEAYAQIGRELKVIAELGFPGYFLVVHDIVEFCRREGILCQ 352 Query 399 GRGSAANSAVCYALGVTAVDPVANELLFERFLSPARDGPPDIDIDIESDQREKVIQYVYH 458 GRGSAANSAVCY+LG+T VDPV +LLFERFL+P RDGPPDID+DIES +RE+ IQYVY Sbjct 353 GRGSAANSAVCYSLGITNVDPVRAQLLFERFLAPERDGPPDIDVDIESGRREEAIQYVYS 412 Query 459 KYGRDYAAQVANVITYRGRSAVRDMARALGFSPGQQDAWSKQVSHWTGQAD-----DVDG 513 +YGRDYAAQVANVITYRGRSAVRD+ARALG+SPGQQDAWSK V W+G + Sbjct 413 RYGRDYAAQVANVITYRGRSAVRDVARALGYSPGQQDAWSKSVDRWSGLKNHEGEATEHT 472 Query 514 IPEQVIDLATQIRNLPRHLGIHSGGMVICDRPIADVCPVEWARMANRSVLQWDKDDCAAI 573 +P V+ LA Q+ LPRHLGIHSGGMVICDRP+ADV PVEWARM R+VLQWDKDDCAA+ Sbjct 473 VPPDVLALARQLVGLPRHLGIHSGGMVICDRPVADVVPVEWARMPGRTVLQWDKDDCAAV 532 Query 574 GLVKFDLLGLGMLSALHYAKDLVAEHKGIEVDLARLDLSEPAVYEMLARADSVGVFQVES 633 GLVKFD+LGLGML+ALH+A DL AEHK ++VDLA+LDL++P VYEML R DSVGVFQVES Sbjct 533 GLVKFDMLGLGMLTALHHAIDLAAEHKDLDVDLAKLDLADPQVYEMLCRGDSVGVFQVES 592 Query 634 RAQMATLPRLKPRVFYDLVVEVALIRPGPIQGGSVHPYIRRRNGVDPVIYEHPSMAPALR 693 RAQMATLPRL+PR FYDLVVEVALIRPGPIQGGSVHPYIRRRNG + V ++HP++ L Sbjct 593 RAQMATLPRLRPRTFYDLVVEVALIRPGPIQGGSVHPYIRRRNGREKVEFDHPALEEVLG 652 Query 694 KTLGVPLFQEQLMQLAVDCAGFSAAEADQLRRAMGSKRSTERMRRLRGRFYDGMRALHG- 752 +TLG+PLFQEQLMQ+A AGF+ AEADQLRRAMG+KRS ERM RL+ RF+ GMR LHG Sbjct 653 RTLGIPLFQEQLMQIATVIAGFTGAEADQLRRAMGAKRSPERMARLKERFFAGMRELHGI 712 Query 753 ---------APDEVIDRIYEKLEAFANFGFPESHALSFASLVFYSAWFKLHHPAAFCAAL 803 EV +RI+EK+ AFAN+GFPESH+ SFA++V+YSAWFK HHPA FCAAL Sbjct 713 GTSPPGTPYTGPEVGERIWEKMCAFANYGFPESHSQSFAAIVYYSAWFKCHHPAIFCAAL 772 Query 804 LRAQPMGFYSPQSLVADARRHGVAVHGPCVNASLAHATCENAGTEVRLGLGAVRYLGAEL 863 LR+QPMGFYSPQSLVADARRHGV VH PCVN SL ATCEN GTEVRLGL +VR +G +L Sbjct 773 LRSQPMGFYSPQSLVADARRHGVTVHRPCVNRSLGGATCENDGTEVRLGLESVRAIGEDL 832 Query 864 AEKLVAERTANGPFTSLPDLTSRVQLSVPQVEALATAGALGCFGM-SRREALWAAGAAAT 922 A + ER ++GP+TS DL R LSV Q+EALATAGAL G RR ALW+A AA Sbjct 833 ATAIADERDSHGPYTSAADLAGRTGLSVRQMEALATAGALDSLGTGGRRAALWSAATAAR 892 Query 923 GRPDRLPGVGSSSHIPALPGMSELELAAADVWATGVSPDSYPTQFLRADLDAMGVLPAER 982 +P LPG+ S PALPGMS LEL +AD+ ATG+SP+ YPT R LD+ GV Sbjct 893 EKPGMLPGL-SQVDAPALPGMSLLELTSADLAATGISPEEYPTVHARPWLDSQGVCTTAG 951 Query 983 LGSVSDGDRVLIAGAVTHRQRPATAQGVTFINLEDETGMVNVLCTPGVWARHRKLAHTAP 1042 L V DG R+ +AGAVTHRQRPATA+GVTF++LEDETGM N++C+ G+WAR+R + +AP Sbjct 952 LAHVPDGSRIRVAGAVTHRQRPATAEGVTFLSLEDETGMTNIVCSVGLWARYRPIVSSAP 1011 Query 1043 ALLIRGQVQNASGAITVVAERMGRLTLAVG-ARSRDFR 1079 AL++RG V+N SGA++VVA+++ RL L + RSRDFR Sbjct 1012 ALIVRGTVENRSGAVSVVADKIERLHLGMAIGRSRDFR 1049 >gi|302524129|ref|ZP_07276471.1| error-prone DNA polymerase [Streptomyces sp. AA4] gi|302433024|gb|EFL04840.1| error-prone DNA polymerase [Streptomyces sp. AA4] Length=1053 Score = 1285 bits (3325), Expect = 0.0, Method: Compositional matrix adjust. Identities = 661/1055 (63%), Positives = 785/1055 (75%), Gaps = 21/1055 (1%) Query 44 VAYAELHAHSAYSFLDGASTPEELVEEAARLGLCALALTDHDGLYGAVRFAEAAAELDVR 103 +AYAELH HS +SFLDGAS PEELVEEAARL L A+ALTDHDG+YG VRFAEAA EL V Sbjct 1 MAYAELHCHSNFSFLDGASHPEELVEEAARLRLDAIALTDHDGMYGVVRFAEAAKELGVA 60 Query 104 TVFGAELSLGATA-RTERPDPPGPHLLVLARGPEGYRRLSRQLAAAHLAG--------GE 154 TVFG ELS G +A + DP G HLL+LARG +GYR L R + A L G E Sbjct 61 TVFGTELSFGLSAPQNGVADPEGEHLLLLARGSDGYRSLCRAITAGQLRGHDEKDAERAE 120 Query 155 KGKPRYDFDALTEAAGGHWHILTGCRKGHVRQALSQGGPAAAQRALADLVDRFTPSRVSI 214 KG+P YD A+ E G +LTGCRKG VR AL + GP AA L LVD F ++V + Sbjct 121 KGRPIYDLSAVAEEVVGKCAVLTGCRKGSVRSALVREGPDAAFAELRRLVDLFGRTQVYV 180 Query 215 ELTHHGHPLDDERNAALAGLAPRFGVGIVATTGAHFADPSRGRLAMAMAAIRARRSLDSA 274 EL HG PLD N LA +A + VATT AH+A P RGRLA A+AAIRARR +D Sbjct 181 ELIDHGQPLDSTHNDLLAEMADELKLPTVATTAAHYARPERGRLADALAAIRARRGIDDL 240 Query 275 AGWLAPLGGAHLRSGEEMARLFAWCPEAVTAAAELGERCAFGLQLIAPRLPPFDVPDGHT 334 GWL A LRSG EMA +F P AV +A LG CAF L+L+AP+LPPFDVP G T Sbjct 241 EGWLPGDAAAFLRSGNEMAEIFQRYPGAVQRSALLGMECAFPLKLLAPKLPPFDVPKGET 300 Query 335 EDSWLRSLVMAGARERY-GPPKSAPRAYSQIEHELKVIAQLRFPGYFLVVHDITRFCRDN 393 E + LR+LV G +ERY G PK A +A QI+HE++VI L FPGYFL+V DI RFCR+ Sbjct 301 ETTHLRALVREGFKERYRGKPKEA-QAEKQIKHEMEVIESLGFPGYFLIVWDIVRFCREQ 359 Query 394 DILCQGRGSAANSAVCYALGVTAVDPVANELLFERFLSPARDGPPDIDIDIESDQREKVI 453 DILCQGRGSAANSAVCYALG+T VDP+ LLFERFL+P RDG PDID+DIESD+RE+ I Sbjct 360 DILCQGRGSAANSAVCYALGITKVDPIKYNLLFERFLAPDRDGYPDIDLDIESDRREEAI 419 Query 454 QYVYHKYGRDYAAQVANVITYRGRSAVRDMARALGFSPGQQDAWSKQVSHW----TGQAD 509 QYVY K+GR AAQVANVITYR RSA+RD ARALG+SPGQQDAWSKQ+ W + + D Sbjct 420 QYVYGKHGRLNAAQVANVITYRARSAIRDAARALGYSPGQQDAWSKQIDRWGALRSTEKD 479 Query 510 DVDGIPEQVIDLATQIRNLPRHLGIHSGGMVICDRPIADVCPVEWARMANRSVLQWDKDD 569 IP V+ LA + + PRHLGIHSGGMV+C P++ VCPVEWARM NRSVLQW+K+D Sbjct 480 HDHDIPNDVVQLAFALEDFPRHLGIHSGGMVMCREPVSQVCPVEWARMENRSVLQWEKED 539 Query 570 CAAIGLVKFDLLGLGMLSALHYAKDLVAEHKGIEVDLARLDLSEPAVYEMLARADSVGVF 629 CAA+GLVKFDLLGLGMLSALHY DLV E+K E+DLA LDL++ +YEML AD++GVF Sbjct 540 CAAVGLVKFDLLGLGMLSALHYMLDLVKEYKDEEIDLAELDLADENIYEMLCHADAIGVF 599 Query 630 QVESRAQMATLPRLKPRVFYDLVVEVALIRPGPIQGGSVHPYIRRRNGVDPVIYEHPSMA 689 QVESRAQ+ATLPRL+P+ FYDL VEVALIRPGPIQGGSVHPYIRR+ G + Y+HP + Sbjct 600 QVESRAQLATLPRLRPKEFYDLAVEVALIRPGPIQGGSVHPYIRRKQGREKWEYDHPLLK 659 Query 690 PALRKTLGVPLFQEQLMQLAVDCAGFSAAEADQLRRAMGSKRSTERMRRLRGRFYDGMRA 749 AL+KTLGVPLFQEQ+MQ+A+D A F+ AEADQLR AMGSKRS +M RL RF DG A Sbjct 660 NALKKTLGVPLFQEQMMQIALDVAKFTPAEADQLRHAMGSKRSQRKMERLHKRFLDGAVA 719 Query 750 LHGAPDEVIDRIYEKLEAFANFGFPESHALSFASLVFYSAWFKLHHPAAFCAALLRAQPM 809 +G E+ ++I++KL+AFANFGFPESHALSFA LVF SA+FK +HP AFCA LLRAQPM Sbjct 720 -NGVDAELAEKIFQKLKAFANFGFPESHALSFAHLVFASAYFKHYHPDAFCAGLLRAQPM 778 Query 810 GFYSPQSLVADARRHGVAVHGPCVNASLAHATCE---NAGT--EVRLGLGAVRYLGAELA 864 GFYSPQSLVADARRHGV GP +N SL HAT E + G VR GL VR +G LA Sbjct 779 GFYSPQSLVADARRHGVTTLGPDINRSLPHATLEALPDNGKLHAVRGGLSTVRMIGETLA 838 Query 865 EKLVAERTANGPFTSLPDLTSRVQLSVPQVEALATAGALGCFGMSRREALWAAGAAATGR 924 E++VAER ANG + S+ DL RV+L+ PQ+EALATAGA FG RR+ALW+AGA A R Sbjct 839 EEIVAERQANGRYESMSDLGRRVRLTTPQLEALATAGAFSAFGPDRRQALWSAGAVAQDR 898 Query 925 PDRLPGVGSSSHIPALPGMSELELAAADVWATGVSPDSYPTQFLRADLDAMGVLPAERLG 984 P++LPG G P LPGM L+LAAADVWATG+SPDSYPT+F+R LDA+GV+ A++L Sbjct 899 PEKLPGTGVGVDAPMLPGMDGLDLAAADVWATGISPDSYPTEFIRDRLDALGVVTADKLL 958 Query 985 SVSDGDRVLIAGAVTHRQRPATAQGVTFINLEDETGMVNVLCTPGVWARHRKLAHTAPAL 1044 DG+RVL+ GAVTHRQRPATA GVTF+NLEDETGMVNV+CT G+W R ++A + AL Sbjct 959 DREDGERVLVGGAVTHRQRPATAGGVTFLNLEDETGMVNVICTLGLWQRFHRIARGSAAL 1018 Query 1045 LIRGQVQNASGAITVVAERMGRLTLAVGARSRDFR 1079 L+ G V+ A G +V A+++ +L L + +SRDFR Sbjct 1019 LVHGVVEKADGVASVRAQKLEQLRLRIPTKSRDFR 1053 >gi|300782746|ref|YP_003763037.1| DNA polymerase III subunit alpha [Amycolatopsis mediterranei U32] gi|299792260|gb|ADJ42635.1| DNA polymerase III subunit alpha [Amycolatopsis mediterranei U32] gi|340524120|gb|AEK39325.1| error-prone DNA polymerase [Amycolatopsis mediterranei S699] Length=1103 Score = 1280 bits (3311), Expect = 0.0, Method: Compositional matrix adjust. Identities = 674/1088 (62%), Positives = 798/1088 (74%), Gaps = 25/1088 (2%) Query 13 GVPAFDADGDVPR-SRKRGAYQPPG-----RERVGSS---VAYAELHAHSAYSFLDGAST 63 G+P D GD P R R YQ PG R G+ V YAELH HS +SFLDGAS Sbjct 20 GMPPGD-HGDSPAWGRHREGYQRPGDLPARRNDDGAETVRVPYAELHCHSNFSFLDGASH 78 Query 64 PEELVEEAARLGLCALALTDHDGLYGAVRFAEAAAELDVRTVFGAELSLGA-TARTERPD 122 PEELVEEAARL L A+ALTDHDG+YG VRFAEAA EL V TVFG ELS G + + PD Sbjct 79 PEELVEEAARLELDAIALTDHDGMYGVVRFAEAARELGVDTVFGTELSFGLRSPQNGVPD 138 Query 123 PPGPHLLVLARGPEGYRRLSRQLAAAHLA-GGEKGKPRYDFDALTEAAGGHWHILTGCRK 181 P G HLL+LARG +GYR L R + A + EKG+P YD A+ E G +LTGCRK Sbjct 139 PEGEHLLLLARGDQGYRALCRAITAGQIHHQAEKGRPSYDLGAVAEEVAGQCVVLTGCRK 198 Query 182 GHVRQALSQGGPAAAQRALADLVDRFTPSRVSIELTHHGHPLDDERNAALAGLAPRFGVG 241 G VR AL GPAAA L +LVDRF V +ELT H PLD N L LA G+ Sbjct 199 GAVRSALVAHGPAAAAEKLKELVDRFGRDNVYVELTDHRQPLDSTHNDLLTQLAGELGLP 258 Query 242 IVATTGAHFADPSRGRLAMAMAAIRARRSLDSAAGWLAPLGGAHLRSGEEMARLFAWCPE 301 VATT AH+A P R LA A+AAIRARR +D GWL G A LRSG EM LF P Sbjct 259 TVATTAAHYARPERAPLADALAAIRARRGIDELEGWLPAAGTAFLRSGAEMDALFRRYPG 318 Query 302 AVTAAAELGERCAFGLQLIAPRLPPFDVPDGHTEDSWLRSLVMAGARERYGPPKSAPRAY 361 AV +A LG CAF L+LIAP LPPFDVP+G+TE ++LR L GA ER+ +A Sbjct 319 AVRRSALLGMECAFPLKLIAPELPPFDVPEGYTETTYLRELTKEGAEERFQGKPHEEQAK 378 Query 362 SQIEHELKVIAQLRFPGYFLVVHDITRFCRDNDILCQGRGSAANSAVCYALGVTAVDPVA 421 QI+HEL +I +L FPGYFL+V DI RFCR++DILCQGRGSAANSAVCYALG+T VD VA Sbjct 379 EQIKHELAIIEELGFPGYFLIVWDIVRFCREHDILCQGRGSAANSAVCYALGITKVDSVA 438 Query 422 NELLFERFLSPARDGPPDIDIDIESDQREKVIQYVYHKYGRDYAAQVANVITYRGRSAVR 481 ELLFERFL+P RDG PDID+DIESD+RE+ IQYV+ K+GR AQVANVITYR RSAVR Sbjct 439 YELLFERFLAPDRDGYPDIDLDIESDRREEAIQYVFEKHGRLRIAQVANVITYRARSAVR 498 Query 482 DMARALGFSPGQQDAWSKQVSHW----TGQADDVDGIPEQVIDLATQIRNLPRHLGIHSG 537 D ARALG+SPGQQDAWSKQ+ W + D IP++V+ LA + + PRHLGIHSG Sbjct 499 DAARALGYSPGQQDAWSKQIDRWGSLQNTEKDHDHDIPDEVLQLAFALEDFPRHLGIHSG 558 Query 538 GMVICDRPIADVCPVEWARMANRSVLQWDKDDCAAIGLVKFDLLGLGMLSALHYAKDLVA 597 GMV+C P++ V PVEWARMA+RSV+QW+K+DCAA GLVKFDLLGLGMLSALHY DLVA Sbjct 559 GMVMCAEPVSQVVPVEWARMADRSVIQWEKEDCAAAGLVKFDLLGLGMLSALHYMIDLVA 618 Query 598 EHKGIEVDLARLDLSEPAVYEMLARADSVGVFQVESRAQMATLPRLKPRVFYDLVVEVAL 657 E+K +VDLA LDL++ +Y+ML RAD++GVFQVESRAQ+ATLPRL+PR FYDL VEVAL Sbjct 619 EYKDEQVDLAELDLADEKIYDMLCRADAIGVFQVESRAQLATLPRLQPREFYDLAVEVAL 678 Query 658 IRPGPIQGGSVHPYIRRRNGVDPVIYEHPSMAPALRKTLGVPLFQEQLMQLAVDCAGFSA 717 IRPGPIQGGSVHPYIRR+ G + Y+HP + AL KT GVPLFQEQ+MQ+A+D A F+A Sbjct 679 IRPGPIQGGSVHPYIRRKQGREEWTYDHPLLERALHKTKGVPLFQEQMMQIALDVANFTA 738 Query 718 AEADQLRRAMGSKRSTERMRRLRGRFYDGMRALHGAPDEVIDRIYEKLEAFANFGFPESH 777 AEADQLR AMGSKRS +M LR RF +G A +G DE+ +I+ KL+AFANFGFPESH Sbjct 739 AEADQLRHAMGSKRSDRKMDLLRQRFLEGA-AANGVDDELAQKIFLKLKAFANFGFPESH 797 Query 778 ALSFASLVFYSAWFKLHHPAAFCAALLRAQPMGFYSPQSLVADARRHGVAVHGPCVNASL 837 ALSFA LVF SA+FK +HP AF A LLRAQPMGFYSPQSLVADARRHGV VHGP +N SL Sbjct 798 ALSFAHLVFSSAYFKFYHPDAFLAGLLRAQPMGFYSPQSLVADARRHGVTVHGPDINRSL 857 Query 838 AHATCENAGTE-----VRLGLGAVRYLGAELAEKLVAERTANGPFTSLPDLTSRVQLSVP 892 HAT E + VR GL VR +G +LA+++VAER NG + + D+ RV+L+ P Sbjct 858 PHATLEALPDKGKLHAVRTGLSTVRKIGEDLAKRIVAERAENGDYRDMADVARRVRLTTP 917 Query 893 QVEALATAGALGCFGMSRREALWAAGAAATGRPDRLPG-VGSSSHIPALPGMSELELAAA 951 Q+EALATAGA FG RR+ALW AGA A RP+RLPG VGS + P LPGM L++AAA Sbjct 918 QIEALATAGAFAGFGGDRRQALWTAGAVAGERPERLPGLVGSPA--PVLPGMDGLDVAAA 975 Query 952 DVWATGVSPDSYPTQFLRADLDAMGVLPAERLGSVSDGDRVLIAGAVTHRQRPATAQGVT 1011 DVWATGVSPDSYPT+F+R LD +GV+PA L + DG RVLI GAVTHRQRPATA GVT Sbjct 976 DVWATGVSPDSYPTEFIRDRLDELGVVPAGGLADLDDGARVLIGGAVTHRQRPATAGGVT 1035 Query 1012 FINLEDETGMVNVLCTPGVWARHRKLAHTAPALLIRGQVQNASGAITVVAERMGRLTLAV 1071 F+N+EDETGM+NV+CT G+W R+ ++A ++PALLIRG V+ A G ++V+A R+ L + + Sbjct 1036 FLNIEDETGMINVICTLGLWQRYHRVARSSPALLIRGVVEKADGVVSVLAHRIEPLPMRI 1095 Query 1072 GARSRDFR 1079 A+SRDFR Sbjct 1096 KAKSRDFR 1103 >gi|330469312|ref|YP_004407055.1| error-prone DNA polymerase [Verrucosispora maris AB-18-032] gi|328812283|gb|AEB46455.1| error-prone DNA polymerase [Verrucosispora maris AB-18-032] Length=1088 Score = 1269 bits (3285), Expect = 0.0, Method: Compositional matrix adjust. Identities = 673/1088 (62%), Positives = 792/1088 (73%), Gaps = 29/1088 (2%) Query 16 AFDADG-DVPR-SRKRGAYQPPGRERVGSSVAYAELHAHSAYSFLDGASTPEELVEEAAR 73 A DADG D P SR+R Y PP R + YAELHAH+ +SFLDGAS PEELVEEA R Sbjct 6 AVDADGGDSPAWSRRREHYSPPELTRPDGVLPYAELHAHTNFSFLDGASHPEELVEEATR 65 Query 74 LGLCALALTDHDGLYGAVRFAEAAAELDVRTVFGAELSLGATA-RTERPDPPGPHLLVLA 132 LGL ALA+TDHDG YG VRFAEAA L + T+FGAEL+LG + PDP G HLLVLA Sbjct 66 LGLTALAVTDHDGFYGVVRFAEAARALHLPTIFGAELTLGLPGPQNGVPDPHGKHLLVLA 125 Query 133 RGPEGYRRLSRQLAAAHLAGGEKGKPRY-DFDALTEAAGGHWHILTGCRKGHVRQALSQG 191 G EGY RL+ +A AHL GGEKG+P Y + + + H +LTGCRKGHV AL Sbjct 126 HGHEGYARLATTIARAHLRGGEKGRPVYGELEEIAADLRDHVLVLTGCRKGHVPAALLTR 185 Query 192 GPAAAQRALADLVDRFTPSRVSIELTHHGHPLDDERNAALAGLAPRFGVGIVATTGAHFA 251 G AA R L L F V++ELT HGHP+D +RN ALA LA G+ VAT H+A Sbjct 186 GVDAAARELDRLTTLFGAETVAVELTDHGHPIDGDRNDALAELATAAGLPTVATGNVHYA 245 Query 252 DPSRGRLAMAMAAIRARRSLDSAAGWLAPLGGAHLRSGEEMARLFAWCPEAVTAAAELGE 311 P R RLA +AA+RARRSLD GWL G AHLRSG EMA FA P AV AAE G Sbjct 246 TPGRRRLATTLAAVRARRSLDEMDGWLPAAGTAHLRSGAEMAARFAAYPGAVARAAEFGA 305 Query 312 RCAFGLQLIAPRLPPFDVPDGHTEDSWLRSLVMAGARERYGPPKSAPRAYSQIEHELKVI 371 AF LQL+AP+LP + VP GHTE SWLR L AGARERYGP ++ P+AY+Q++HEL +I Sbjct 306 ELAFDLQLVAPQLPAYPVPPGHTEMSWLRQLTEAGARERYGPREAHPQAYAQLDHELNMI 365 Query 372 AQLRFPGYFLVVHDITRFCRDNDILCQGRGSAANSAVCYALGVTAVDPVANELLFERFLS 431 L FPGYFLVV+DI FCR DI CQGRGSAANSAVCYAL +T VD V + LLFERFL+ Sbjct 366 EALGFPGYFLVVYDIVEFCRRADIYCQGRGSAANSAVCYALRITNVDAVRHRLLFERFLA 425 Query 432 PARDGPPDIDIDIESDQREKVIQYVYHKYGRDYAAQVANVITYRGRSAVRDMARALGFSP 491 P RDGPPDID+DIESD+RE+VIQ+VY +YGR++ AQVANVI+YR RSAVRD+A+A GFSP Sbjct 426 PERDGPPDIDVDIESDRREEVIQHVYARYGREHTAQVANVISYRPRSAVRDVAKAFGFSP 485 Query 492 GQQDAWSKQVSHWTG-QADDVDGIPEQVIDLATQIRNLPRHLGIHSGGMVICDRPIADVC 550 GQQDAWSKQ+ W A DV IPEQVI A +++ PRHLGIHSGGMVICDRP+ +VC Sbjct 486 GQQDAWSKQIDRWGDVAAVDVPEIPEQVIAYANEVQTFPRHLGIHSGGMVICDRPVIEVC 545 Query 551 PVEWARMANRSVLQWDKDDCAAIGLVKFDLLGLGMLSALHYAKDLVAEHKGIEVDLARLD 610 PVEW RM RSVLQWDKDDCAA+GLVKFDLLGLGMLSALHY D++ G+ +DL Sbjct 546 PVEWGRMPGRSVLQWDKDDCAAVGLVKFDLLGLGMLSALHYGYDMI----GMSLDLGEET 601 Query 611 LSEPAVYEMLARADSVGVFQVESRAQMATLPRLKPRVFYDLVVEVALIRPGPIQGGSVHP 670 L +P VY+ML RADSVGVFQVESRAQMATLPRLKPR FYDLVVEVALIRPGPIQGGSVHP Sbjct 602 LDDPEVYDMLCRADSVGVFQVESRAQMATLPRLKPREFYDLVVEVALIRPGPIQGGSVHP 661 Query 671 YIRRRNGVDPVIYEHPSMAPALRKTLGVPLFQEQLMQLAVDCAGFSAAEADQLRRAMGSK 730 YIRR+NG +PV Y HP M AL KTLGVPLFQEQLMQLA+D AGF AAEADQLRRAMG+K Sbjct 662 YIRRKNGQEPVTYAHPLMRNALEKTLGVPLFQEQLMQLAIDLAGFDAAEADQLRRAMGAK 721 Query 731 RSTERMRRLRGRFYDGMRALHGAPDEVIDRIYEKLEAFANFGFPESHALSFASLVFYSAW 790 RS ERM R+ R Y GM A G E+ D +Y KL AFA++GFPESHA+SFA LV+ S+W Sbjct 722 RSVERMARIADRLYAGM-AQRGITGELADDVYRKLTAFASYGFPESHAMSFAYLVYASSW 780 Query 791 FKLHHPAAFCAALLRAQPMGFYSPQSLVADARRHGVAVHGPCVNASLAHATCENA----- 845 K +HP F AALL AQPMGFYSPQ+LV DARRHGV V P VNAS E+ Sbjct 781 LKRYHPGPFLAALLSAQPMGFYSPQTLVDDARRHGVQVRRPDVNASGVKPVLESTAETRW 840 Query 846 --------------GTEVRLGLGAVRYLGAELAEKLVAERTANGPFTSLPDLTSRVQLSV 891 G VRLGL VR LG +A+++VAER+A+GP+ +PDL RV L+ Sbjct 841 GSQPGEPPHAWGLGGPAVRLGLSGVRTLGEPVAQRIVAERSAHGPYRDMPDLARRVGLTA 900 Query 892 PQVEALATAGALGCFGMSRREALWAAGAAATGRPDRLPGVGSSSHIPALPGMSELELAAA 951 Q+EALATA A CFG++RR+ALWAAGAAA RPDRLPG + + P LPGM ++ A Sbjct 901 AQLEALATADAFACFGLTRRQALWAAGAAAQDRPDRLPGTVTGAAAPTLPGMEAVDRLVA 960 Query 952 DVWATGVSPDSYPTQFLRADLDAMGVLPAERLGSVSDGDRVLIAGAVTHRQRPATAQGVT 1011 DVWATG+SP+++P +F+R L+AMG +P +RLG V G R+ + G VTHRQRPATA GVT Sbjct 961 DVWATGLSPENHPARFIRPQLEAMGAVPIDRLGRVEPGRRIRVGGIVTHRQRPATAGGVT 1020 Query 1012 FINLEDETGMVNVLCTPGVWARHRKLAHTAPALLIRGQVQNASGAITVVAERMGRLTLAV 1071 F+NLEDETGM+NV C+PG+W R R++A T+ AL++RG++Q G +VA+R+ + V Sbjct 1021 FLNLEDETGMLNVTCSPGLWQRQRRVARTSAALVVRGRLQRHEGVTNLVADRLEAIEPPV 1080 Query 1072 GARSRDFR 1079 SRDFR Sbjct 1081 RPASRDFR 1088 Lambda K H 0.321 0.136 0.412 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 2727016038152 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40