BLAST Search Results


BLASTP 2.2.25+


Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.



Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
           15,229,318 sequences; 5,219,829,388 total letters



Query= Rv3386

Length=234
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

gi|167966937|ref|ZP_02549214.1|  transposase [Mycobacterium tuber...   468    4e-130
gi|15610522|ref|NP_217903.1|  transposase [Mycobacterium tubercul...   466    1e-129
gi|289571621|ref|ZP_06451848.1|  transposase [Mycobacterium tuber...   383    1e-104
gi|307086165|ref|ZP_07495278.1|  hypothetical protein TMLG_02974 ...   357    1e-96 
gi|289763567|ref|ZP_06522945.1|  transposase [Mycobacterium tuber...   350    7e-95 
gi|111025277|ref|YP_707697.1|  transposase [Rhodococcus jostii RH...   290    1e-76 
gi|111025371|ref|YP_707791.1|  transposase [Rhodococcus jostii RH...   289    2e-76 
gi|111026321|ref|YP_708604.1|  IS5 family transposase [Rhodococcu...   286    1e-75 
gi|83590979|ref|YP_430988.1|  IS5 family transposase [Moorella th...   213    3e-53 
gi|147677689|ref|YP_001211904.1|  hypothetical protein PTH_1354 [...   194    8e-48 
gi|169830876|ref|YP_001716858.1|  putative methyl-accepting chemo...   169    3e-40 
gi|253577715|ref|ZP_04855012.1|  transposase [Paenibacillus sp. o...   169    4e-40 
gi|169830618|ref|YP_001716600.1|  hypothetical protein Daud_0420 ...   159    3e-37 
gi|289749569|ref|ZP_06508947.1|  transposase [Mycobacterium tuber...   152    3e-35 
gi|148822245|ref|YP_001286999.1|  transposase [Mycobacterium tube...   124    1e-26 
gi|15608176|ref|NP_215552.1|  truncated IS1560 transposase [Mycob...   124    1e-26 
gi|340626047|ref|YP_004744499.1|  putative IS1560 transposase [My...   122    5e-26 
gi|289761172|ref|ZP_06520550.1|  LOW QUALITY PROTEIN: transposase...   105    6e-21 
gi|240170673|ref|ZP_04749332.1|  transposase [Mycobacterium kansa...  84.3    1e-14 
gi|308205890|gb|ADO19302.1|  hypothetical protein Nfla_9402 [Nost...  84.0    2e-14 
gi|15608175|ref|NP_215551.1|  transposase [Mycobacterium tubercul...  83.6    2e-14 
gi|339297677|gb|AEJ49787.1|  transposase [Mycobacterium tuberculo...  83.6    2e-14 
gi|206603356|gb|EDZ39836.1|  Transposase [Leptospirillum sp. Grou...  83.2    3e-14 
gi|124515920|gb|EAY57429.1|  putative transposase [Leptospirillum...  83.2    3e-14 
gi|124516354|gb|EAY57862.1|  transposase [Leptospirillum rubarum]     83.2    3e-14 
gi|124514920|gb|EAY56431.1|  probable transposase [Leptospirillum...  82.8    4e-14 
gi|340626046|ref|YP_004744498.1|  putative transposase (fragment)...  82.8    4e-14 
gi|124514574|gb|EAY56086.1|  probable transposase [Leptospirillum...  82.4    5e-14 
gi|124515502|gb|EAY57012.1|  probable transposase [Leptospirillum...  82.0    6e-14 
gi|124515153|gb|EAY56664.1|  probable transposase [Leptospirillum...  82.0    6e-14 
gi|124515160|gb|EAY56671.1|  probable transposase [Leptospirillum...  82.0    6e-14 
gi|289442458|ref|ZP_06432202.1|  transposase [Mycobacterium tuber...  82.0    7e-14 
gi|124515144|gb|EAY56655.1|  probable transposase [Leptospirillum...  81.6    9e-14 
gi|124516508|gb|EAY58016.1|  transposase [Leptospirillum rubarum]     81.3    1e-13 
gi|124514490|gb|EAY56003.1|  probable transposase [Leptospirillum...  81.3    1e-13 
gi|189426709|ref|YP_001953885.1|  transposase IS4 family protein ...  79.3    4e-13 
gi|298248375|ref|ZP_06972180.1|  transposase IS4 family protein [...  79.0    6e-13 
gi|298248369|ref|ZP_06972174.1|  transposase IS4 family protein [...  78.6    8e-13 
gi|298241044|ref|ZP_06964851.1|  transposase IS4 family protein [...  77.8    1e-12 
gi|189502523|ref|YP_001958240.1|  hypothetical protein Aasi_1178 ...  71.2    1e-10 
gi|189502330|ref|YP_001958047.1|  hypothetical protein Aasi_0960 ...  71.2    1e-10 
gi|189502518|ref|YP_001958235.1|  hypothetical protein Aasi_1172 ...  70.9    1e-10 
gi|13475201|ref|NP_106765.1|  transposase [Mesorhizobium loti MAF...  68.6    7e-10 
gi|167968536|ref|ZP_02550813.1|  transposase [Mycobacterium tuber...  68.6    7e-10 
gi|20804074|emb|CAD31277.1|  PUTATIVE TRANSPOSASE FOR INSERTION E...  68.2    9e-10 
gi|334319413|ref|YP_004551972.1|  transposase IS4 family protein ...  68.2    1e-09 
gi|16263345|ref|NP_436138.1|  TRm17a transposase fragment [Sinorh...  67.8    1e-09 
gi|15966574|ref|NP_386927.1|  putative partial transposase for IS...  67.8    1e-09 
gi|16262702|ref|NP_435495.1|  TRm17a transposase [Sinorhizobium m...  67.8    1e-09 
gi|15966358|ref|NP_386711.1|  transposase ISRM17 [Sinorhizobium m...  67.4    2e-09 


>gi|167966937|ref|ZP_02549214.1| transposase [Mycobacterium tuberculosis H37Ra]
 gi|253800432|ref|YP_003033433.1| transposase [Mycobacterium tuberculosis KZN 1435]
 gi|254552491|ref|ZP_05142938.1| transposase [Mycobacterium tuberculosis '98-R604 INH-RIF-EM']
 8 more sequence titles
 gi|294995843|ref|ZP_06801534.1| transposase [Mycobacterium tuberculosis 210]
 gi|297636046|ref|ZP_06953826.1| transposase [Mycobacterium tuberculosis KZN 4207]
 gi|297733045|ref|ZP_06962163.1| transposase [Mycobacterium tuberculosis KZN R506]
 gi|313660377|ref|ZP_07817257.1| transposase [Mycobacterium tuberculosis KZN V2475]
 gi|253321935|gb|ACT26538.1| transposase [Mycobacterium tuberculosis KZN 1435]
 gi|323717968|gb|EGB27156.1| transposase [Mycobacterium tuberculosis CDC1551A]
 gi|339296210|gb|AEJ48321.1| transposase [Mycobacterium tuberculosis CCDC5079]
 gi|339299810|gb|AEJ51920.1| transposase [Mycobacterium tuberculosis CCDC5180]
Length=259

 Score =  468 bits (1203),  Expect = 4e-130, Method: Compositional matrix adjust.
 Identities = 234/234 (100%), Positives = 234/234 (100%), Gaps = 0/234 (0%)

Query  1    VFRTVGDQASLWESVLPEELRRLPEELARVDALLDDSAFFCPFVPFFDPRMGRPSIPMET  60
            VFRTVGDQASLWESVLPEELRRLPEELARVDALLDDSAFFCPFVPFFDPRMGRPSIPMET
Sbjct  26   VFRTVGDQASLWESVLPEELRRLPEELARVDALLDDSAFFCPFVPFFDPRMGRPSIPMET  85

Query  61   YLRLMFLKFRYRLGYESLCREVTDSITWRRFCRIPLEGSVPHPTTLMKLTTRCGEDAVAG  120
            YLRLMFLKFRYRLGYESLCREVTDSITWRRFCRIPLEGSVPHPTTLMKLTTRCGEDAVAG
Sbjct  86   YLRLMFLKFRYRLGYESLCREVTDSITWRRFCRIPLEGSVPHPTTLMKLTTRCGEDAVAG  145

Query  121  LNEALLAKAASEKLLRTNKVRADTTVVEGDVGYPTDTGLLAKAVGSMARTVARIKAADAG  180
            LNEALLAKAASEKLLRTNKVRADTTVVEGDVGYPTDTGLLAKAVGSMARTVARIKAADAG
Sbjct  146  LNEALLAKAASEKLLRTNKVRADTTVVEGDVGYPTDTGLLAKAVGSMARTVARIKAADAG  205

Query  181  SAPLGGSSGPRDRLQAAVTRRAATRSGAGLRAPDHRGASRDRRAGADRGCRGGT  234
            SAPLGGSSGPRDRLQAAVTRRAATRSGAGLRAPDHRGASRDRRAGADRGCRGGT
Sbjct  206  SAPLGGSSGPRDRLQAAVTRRAATRSGAGLRAPDHRGASRDRRAGADRGCRGGT  259


>gi|15610522|ref|NP_217903.1| transposase [Mycobacterium tuberculosis H37Rv]
 gi|15842979|ref|NP_338016.1| IS1560 transposase [Mycobacterium tuberculosis CDC1551]
 gi|31794566|ref|NP_857059.1| transposase [Mycobacterium bovis AF2122/97]
 61 more sequence titles
 gi|121639310|ref|YP_979534.1| putative transposase [Mycobacterium bovis BCG str. Pasteur 1173P2]
 gi|148663249|ref|YP_001284772.1| putative transposase [Mycobacterium tuberculosis H37Ra]
 gi|148824593|ref|YP_001289347.1| transposase [Mycobacterium tuberculosis F11]
 gi|224991807|ref|YP_002646496.1| putative transposase [Mycobacterium bovis BCG str. Tokyo 172]
 gi|254233987|ref|ZP_04927312.1| hypothetical protein TBCG_03328 [Mycobacterium tuberculosis C]
 gi|254365999|ref|ZP_04982044.1| transposase [Mycobacterium tuberculosis str. Haarlem]
 gi|289444958|ref|ZP_06434702.1| transposase [Mycobacterium tuberculosis T46]
 gi|289449082|ref|ZP_06438826.1| transposase [Mycobacterium tuberculosis CPHL_A]
 gi|289555662|ref|ZP_06444872.1| transposase [Mycobacterium tuberculosis KZN 605]
 gi|289576117|ref|ZP_06456344.1| transposase [Mycobacterium tuberculosis K85]
 gi|289747208|ref|ZP_06506586.1| transposase [Mycobacterium tuberculosis 02_1987]
 gi|289752100|ref|ZP_06511478.1| transposase [Mycobacterium tuberculosis T92]
 gi|289755515|ref|ZP_06514893.1| transposase [Mycobacterium tuberculosis EAS054]
 gi|289759545|ref|ZP_06518923.1| transposase [Mycobacterium tuberculosis T85]
 gi|298526865|ref|ZP_07014274.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A]
 gi|308232446|ref|ZP_07664087.1| transposase [Mycobacterium tuberculosis SUMu001]
 gi|308370249|ref|ZP_07666901.1| transposase [Mycobacterium tuberculosis SUMu002]
 gi|308371329|ref|ZP_07667138.1| transposase [Mycobacterium tuberculosis SUMu003]
 gi|308372526|ref|ZP_07667400.1| transposase [Mycobacterium tuberculosis SUMu004]
 gi|308373729|ref|ZP_07667641.1| transposase [Mycobacterium tuberculosis SUMu005]
 gi|308374860|ref|ZP_07667883.1| transposase [Mycobacterium tuberculosis SUMu006]
 gi|308376103|ref|ZP_07668194.1| transposase [Mycobacterium tuberculosis SUMu007]
 gi|308377330|ref|ZP_07668488.1| transposase [Mycobacterium tuberculosis SUMu008]
 gi|308378303|ref|ZP_07668716.1| transposase [Mycobacterium tuberculosis SUMu009]
 gi|308379497|ref|ZP_07668971.1| transposase [Mycobacterium tuberculosis SUMu010]
 gi|308380679|ref|ZP_07669249.1| transposase [Mycobacterium tuberculosis SUMu011]
 gi|339633391|ref|YP_004725033.1| transposase [Mycobacterium africanum GM041182]
 gi|2661665|emb|CAA15771.1| POSSIBLE TRANSPOSASE [Mycobacterium tuberculosis H37Rv]
 gi|13883318|gb|AAK47830.1| IS1560, transposase [Mycobacterium tuberculosis CDC1551]
 gi|31620163|emb|CAD95606.1| POSSIBLE TRANSPOSASE [Mycobacterium bovis AF2122/97]
 gi|121494958|emb|CAL73444.1| Possible transposase [Mycobacterium bovis BCG str. Pasteur 1173P2]
 gi|124599516|gb|EAY58620.1| hypothetical protein TBCG_03328 [Mycobacterium tuberculosis C]
 gi|134151512|gb|EBA43557.1| transposase [Mycobacterium tuberculosis str. Haarlem]
 gi|148507401|gb|ABQ75210.1| putative transposase [Mycobacterium tuberculosis H37Ra]
 gi|148723120|gb|ABR07745.1| transposase [Mycobacterium tuberculosis F11]
 gi|224774922|dbj|BAH27728.1| putative transposase [Mycobacterium bovis BCG str. Tokyo 172]
 gi|289417877|gb|EFD15117.1| transposase [Mycobacterium tuberculosis T46]
 gi|289422040|gb|EFD19241.1| transposase [Mycobacterium tuberculosis CPHL_A]
 gi|289440294|gb|EFD22787.1| transposase [Mycobacterium tuberculosis KZN 605]
 gi|289540548|gb|EFD45126.1| transposase [Mycobacterium tuberculosis K85]
 gi|289687736|gb|EFD55224.1| transposase [Mycobacterium tuberculosis 02_1987]
 gi|289692687|gb|EFD60116.1| transposase [Mycobacterium tuberculosis T92]
 gi|289696102|gb|EFD63531.1| transposase [Mycobacterium tuberculosis EAS054]
 gi|289715109|gb|EFD79121.1| transposase [Mycobacterium tuberculosis T85]
 gi|298496659|gb|EFI31953.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A]
 gi|308213958|gb|EFO73357.1| transposase [Mycobacterium tuberculosis SUMu001]
 gi|308324904|gb|EFP13755.1| transposase [Mycobacterium tuberculosis SUMu002]
 gi|308329135|gb|EFP17986.1| transposase [Mycobacterium tuberculosis SUMu003]
 gi|308332970|gb|EFP21821.1| transposase [Mycobacterium tuberculosis SUMu004]
 gi|308336587|gb|EFP25438.1| transposase [Mycobacterium tuberculosis SUMu005]
 gi|308340460|gb|EFP29311.1| transposase [Mycobacterium tuberculosis SUMu006]
 gi|308344327|gb|EFP33178.1| transposase [Mycobacterium tuberculosis SUMu007]
 gi|308348259|gb|EFP37110.1| transposase [Mycobacterium tuberculosis SUMu008]
 gi|308352984|gb|EFP41835.1| transposase [Mycobacterium tuberculosis SUMu009]
 gi|308356826|gb|EFP45677.1| transposase [Mycobacterium tuberculosis SUMu010]
 gi|308360776|gb|EFP49627.1| transposase [Mycobacterium tuberculosis SUMu011]
 gi|326905226|gb|EGE52159.1| transposase [Mycobacterium tuberculosis W-148]
 gi|328460164|gb|AEB05587.1| transposase [Mycobacterium tuberculosis KZN 4207]
 gi|339332747|emb|CCC28468.1| putative transposase [Mycobacterium africanum GM041182]
 gi|341603335|emb|CCC66016.1| possible transposase [Mycobacterium bovis BCG str. Moreau RDJ]
 gi|344221225|gb|AEN01856.1| transposase [Mycobacterium tuberculosis CTRI-2]
Length=234

 Score =  466 bits (1199),  Expect = 1e-129, Method: Compositional matrix adjust.
 Identities = 233/234 (99%), Positives = 234/234 (100%), Gaps = 0/234 (0%)

Query  1    VFRTVGDQASLWESVLPEELRRLPEELARVDALLDDSAFFCPFVPFFDPRMGRPSIPMET  60
            +FRTVGDQASLWESVLPEELRRLPEELARVDALLDDSAFFCPFVPFFDPRMGRPSIPMET
Sbjct  1    MFRTVGDQASLWESVLPEELRRLPEELARVDALLDDSAFFCPFVPFFDPRMGRPSIPMET  60

Query  61   YLRLMFLKFRYRLGYESLCREVTDSITWRRFCRIPLEGSVPHPTTLMKLTTRCGEDAVAG  120
            YLRLMFLKFRYRLGYESLCREVTDSITWRRFCRIPLEGSVPHPTTLMKLTTRCGEDAVAG
Sbjct  61   YLRLMFLKFRYRLGYESLCREVTDSITWRRFCRIPLEGSVPHPTTLMKLTTRCGEDAVAG  120

Query  121  LNEALLAKAASEKLLRTNKVRADTTVVEGDVGYPTDTGLLAKAVGSMARTVARIKAADAG  180
            LNEALLAKAASEKLLRTNKVRADTTVVEGDVGYPTDTGLLAKAVGSMARTVARIKAADAG
Sbjct  121  LNEALLAKAASEKLLRTNKVRADTTVVEGDVGYPTDTGLLAKAVGSMARTVARIKAADAG  180

Query  181  SAPLGGSSGPRDRLQAAVTRRAATRSGAGLRAPDHRGASRDRRAGADRGCRGGT  234
            SAPLGGSSGPRDRLQAAVTRRAATRSGAGLRAPDHRGASRDRRAGADRGCRGGT
Sbjct  181  SAPLGGSSGPRDRLQAAVTRRAATRSGAGLRAPDHRGASRDRRAGADRGCRGGT  234


>gi|289571621|ref|ZP_06451848.1| transposase [Mycobacterium tuberculosis T17]
 gi|289545375|gb|EFD49023.1| transposase [Mycobacterium tuberculosis T17]
Length=240

 Score =  383 bits (983),  Expect = 1e-104, Method: Compositional matrix adjust.
 Identities = 192/193 (99%), Positives = 192/193 (99%), Gaps = 0/193 (0%)

Query  42   PFVPFFDPRMGRPSIPMETYLRLMFLKFRYRLGYESLCREVTDSITWRRFCRIPLEGSVP  101
            P VPFFDPRMGRPSIPMETYLRLMFLKFRYRLGYESLCREVTDSITWRRFCRIPLEGSVP
Sbjct  48   PVVPFFDPRMGRPSIPMETYLRLMFLKFRYRLGYESLCREVTDSITWRRFCRIPLEGSVP  107

Query  102  HPTTLMKLTTRCGEDAVAGLNEALLAKAASEKLLRTNKVRADTTVVEGDVGYPTDTGLLA  161
            HPTTLMKLTTRCGEDAVAGLNEALLAKAASEKLLRTNKVRADTTVVEGDVGYPTDTGLLA
Sbjct  108  HPTTLMKLTTRCGEDAVAGLNEALLAKAASEKLLRTNKVRADTTVVEGDVGYPTDTGLLA  167

Query  162  KAVGSMARTVARIKAADAGSAPLGGSSGPRDRLQAAVTRRAATRSGAGLRAPDHRGASRD  221
            KAVGSMARTVARIKAADAGSAPLGGSSGPRDRLQAAVTRRAATRSGAGLRAPDHRGASRD
Sbjct  168  KAVGSMARTVARIKAADAGSAPLGGSSGPRDRLQAAVTRRAATRSGAGLRAPDHRGASRD  227

Query  222  RRAGADRGCRGGT  234
            RRAGADRGCRGGT
Sbjct  228  RRAGADRGCRGGT  240


>gi|307086165|ref|ZP_07495278.1| hypothetical protein TMLG_02974 [Mycobacterium tuberculosis SUMu012]
 gi|308364381|gb|EFP53232.1| hypothetical protein TMLG_02974 [Mycobacterium tuberculosis SUMu012]
Length=200

 Score =  357 bits (915),  Expect = 1e-96, Method: Compositional matrix adjust.
 Identities = 175/175 (100%), Positives = 175/175 (100%), Gaps = 0/175 (0%)

Query  1    VFRTVGDQASLWESVLPEELRRLPEELARVDALLDDSAFFCPFVPFFDPRMGRPSIPMET  60
            VFRTVGDQASLWESVLPEELRRLPEELARVDALLDDSAFFCPFVPFFDPRMGRPSIPMET
Sbjct  26   VFRTVGDQASLWESVLPEELRRLPEELARVDALLDDSAFFCPFVPFFDPRMGRPSIPMET  85

Query  61   YLRLMFLKFRYRLGYESLCREVTDSITWRRFCRIPLEGSVPHPTTLMKLTTRCGEDAVAG  120
            YLRLMFLKFRYRLGYESLCREVTDSITWRRFCRIPLEGSVPHPTTLMKLTTRCGEDAVAG
Sbjct  86   YLRLMFLKFRYRLGYESLCREVTDSITWRRFCRIPLEGSVPHPTTLMKLTTRCGEDAVAG  145

Query  121  LNEALLAKAASEKLLRTNKVRADTTVVEGDVGYPTDTGLLAKAVGSMARTVARIK  175
            LNEALLAKAASEKLLRTNKVRADTTVVEGDVGYPTDTGLLAKAVGSMARTVARIK
Sbjct  146  LNEALLAKAASEKLLRTNKVRADTTVVEGDVGYPTDTGLLAKAVGSMARTVARIK  200


>gi|289763567|ref|ZP_06522945.1| transposase [Mycobacterium tuberculosis GM 1503]
 gi|289711073|gb|EFD75089.1| transposase [Mycobacterium tuberculosis GM 1503]
Length=177

 Score =  350 bits (899),  Expect = 7e-95, Method: Compositional matrix adjust.
 Identities = 177/177 (100%), Positives = 177/177 (100%), Gaps = 0/177 (0%)

Query  58   METYLRLMFLKFRYRLGYESLCREVTDSITWRRFCRIPLEGSVPHPTTLMKLTTRCGEDA  117
            METYLRLMFLKFRYRLGYESLCREVTDSITWRRFCRIPLEGSVPHPTTLMKLTTRCGEDA
Sbjct  1    METYLRLMFLKFRYRLGYESLCREVTDSITWRRFCRIPLEGSVPHPTTLMKLTTRCGEDA  60

Query  118  VAGLNEALLAKAASEKLLRTNKVRADTTVVEGDVGYPTDTGLLAKAVGSMARTVARIKAA  177
            VAGLNEALLAKAASEKLLRTNKVRADTTVVEGDVGYPTDTGLLAKAVGSMARTVARIKAA
Sbjct  61   VAGLNEALLAKAASEKLLRTNKVRADTTVVEGDVGYPTDTGLLAKAVGSMARTVARIKAA  120

Query  178  DAGSAPLGGSSGPRDRLQAAVTRRAATRSGAGLRAPDHRGASRDRRAGADRGCRGGT  234
            DAGSAPLGGSSGPRDRLQAAVTRRAATRSGAGLRAPDHRGASRDRRAGADRGCRGGT
Sbjct  121  DAGSAPLGGSSGPRDRLQAAVTRRAATRSGAGLRAPDHRGASRDRRAGADRGCRGGT  177


>gi|111025277|ref|YP_707697.1| transposase [Rhodococcus jostii RHA1]
 gi|110824256|gb|ABG99539.1| probable transposase [Rhodococcus jostii RHA1]
Length=479

 Score =  290 bits (743),  Expect = 1e-76, Method: Compositional matrix adjust.
 Identities = 151/215 (71%), Positives = 169/215 (79%), Gaps = 11/215 (5%)

Query  1    VFRTVGDQASLWESVLPEELRRLPEELARVDALLDDSAFFCPFVPFFDPRMGRPSIPMET  60
            +FRTVGDQ SL+ESVLP+EL RLP EL RVDALLDD AFF PFVP+FDPR+GRPS PMET
Sbjct  1    MFRTVGDQPSLFESVLPQELLRLPAELERVDALLDDPAFFAPFVPYFDPRIGRPSTPMET  60

Query  61   YLRLMFLKFRYRLGYESLCREVTDSITWRRFCRIPLEGSVPHPTTLMKLTTRCGEDAVAG  120
            YLRLMFLKFRYRLGYESLCREV+DS TWRRFCRIPL+GSVPHPTTLMKLTTRCG  AV G
Sbjct  61   YLRLMFLKFRYRLGYESLCREVSDSFTWRRFCRIPLDGSVPHPTTLMKLTTRCGAAAVVG  120

Query  121  LNEALLAKAASEKLLRTNKVRADTTVVEGDVGYPTDTGLLAKAVGSMARTVARIKAADAG  180
            LNEALLAKA   K+LRT K+RADTTVV  +V YPTD+GLLAKA+  +A T  RI+AA   
Sbjct  121  LNEALLAKATEAKVLRTTKLRADTTVVPSNVSYPTDSGLLAKAIRRIAVTGKRIQAAGGA  180

Query  181  SAPLGGSSGPRDRLQAAVTRRAA------TRSGAG  209
            +      +  RDR +AA  R  A      +RS AG
Sbjct  181  T-----RTTVRDRSRAAGRRAHAIGFKLRSRSAAG  210


>gi|111025371|ref|YP_707791.1| transposase [Rhodococcus jostii RHA1]
 gi|110824350|gb|ABG99633.1| transposase [Rhodococcus jostii RHA1]
Length=479

 Score =  289 bits (740),  Expect = 2e-76, Method: Compositional matrix adjust.
 Identities = 140/177 (80%), Positives = 154/177 (88%), Gaps = 0/177 (0%)

Query  1    VFRTVGDQASLWESVLPEELRRLPEELARVDALLDDSAFFCPFVPFFDPRMGRPSIPMET  60
            +FRTVGDQ SL+ESVLP+EL RLP EL RVDALLDD AFF PFVP+FDPR+GRPS PMET
Sbjct  1    MFRTVGDQPSLFESVLPQELLRLPAELERVDALLDDPAFFAPFVPYFDPRIGRPSTPMET  60

Query  61   YLRLMFLKFRYRLGYESLCREVTDSITWRRFCRIPLEGSVPHPTTLMKLTTRCGEDAVAG  120
            YLRLMFLKFRYRLGYESLCREV+DSITWRRFCRIPL+GSVPHPTTLMKLTTRCG  AV G
Sbjct  61   YLRLMFLKFRYRLGYESLCREVSDSITWRRFCRIPLDGSVPHPTTLMKLTTRCGAAAVDG  120

Query  121  LNEALLAKAASEKLLRTNKVRADTTVVEGDVGYPTDTGLLAKAVGSMARTVARIKAA  177
            LNEALLAKA   K+LRT  +RADTTVV  +V YPTD+GLLAKA+  +A T  RI+AA
Sbjct  121  LNEALLAKATEAKVLRTTTLRADTTVVPSNVSYPTDSGLLAKAIRRIAATGKRIQAA  177


>gi|111026321|ref|YP_708604.1| IS5 family transposase [Rhodococcus jostii RHA1]
 gi|110825164|gb|ABH00446.1| possible transposase, IS5 family [Rhodococcus jostii RHA1]
Length=337

 Score =  286 bits (733),  Expect = 1e-75, Method: Compositional matrix adjust.
 Identities = 138/177 (78%), Positives = 152/177 (86%), Gaps = 0/177 (0%)

Query  1    VFRTVGDQASLWESVLPEELRRLPEELARVDALLDDSAFFCPFVPFFDPRMGRPSIPMET  60
            +FRTVGDQ SL+ESVLP+EL RLP EL RVD LLDD AFF PFVP+FDPR+GRPS PMET
Sbjct  1    MFRTVGDQPSLFESVLPQELLRLPAELERVDGLLDDPAFFAPFVPYFDPRIGRPSTPMET  60

Query  61   YLRLMFLKFRYRLGYESLCREVTDSITWRRFCRIPLEGSVPHPTTLMKLTTRCGEDAVAG  120
            YLRLMFLKFRYRLGYESLCREV+DS TWRRFCRIPL+GSVPHPTTLMKLTTRCG  AV G
Sbjct  61   YLRLMFLKFRYRLGYESLCREVSDSFTWRRFCRIPLDGSVPHPTTLMKLTTRCGAAAVVG  120

Query  121  LNEALLAKAASEKLLRTNKVRADTTVVEGDVGYPTDTGLLAKAVGSMARTVARIKAA  177
            LNEALLAKA   K+LRT  +RADTTVV  +V YPTD+GLLAKA+  +A T  RI+AA
Sbjct  121  LNEALLAKATEAKVLRTTTLRADTTVVPSNVSYPTDSGLLAKAIRRIAVTGKRIQAA  177


>gi|83590979|ref|YP_430988.1| IS5 family transposase [Moorella thermoacetica ATCC 39073]
 gi|83573893|gb|ABC20445.1| transposase, IS5 family [Moorella thermoacetica ATCC 39073]
Length=260

 Score =  213 bits (541),  Expect = 3e-53, Method: Compositional matrix adjust.
 Identities = 102/182 (57%), Positives = 127/182 (70%), Gaps = 0/182 (0%)

Query  1    VFRTVGDQASLWESVLPEELRRLPEELARVDALLDDSAFFCPFVPFFDPRMGRPSIPMET  60
            + R    Q +LW+ +LP +L +L  ELARVD LLDD  F  PF+  F+ R+GRP+IPMET
Sbjct  1    MLRLKDPQLTLWDVLLPSDLVQLNPELARVDELLDDDRFMAPFISRFEARLGRPTIPMET  60

Query  61   YLRLMFLKFRYRLGYESLCREVTDSITWRRFCRIPLEGSVPHPTTLMKLTTRCGEDAVAG  120
            YLRLM+LK+RY LGYE L +EV DSI WRRFCRIPL   VPH TTL+KLT RCG   V  
Sbjct  61   YLRLMYLKYRYGLGYEVLVQEVNDSIKWRRFCRIPLTQKVPHATTLIKLTKRCGPGIVKE  120

Query  121  LNEALLAKAASEKLLRTNKVRADTTVVEGDVGYPTDTGLLAKAVGSMARTVARIKAADAG  180
            LN AL+ KA  EK++R  K++ DTTVVE ++ +PTD GLLA  V  + RTV +I+ A   
Sbjct  121  LNAALVQKAREEKIIRGKKLQVDTTVVEANIHHPTDAGLLADGVRVITRTVKKIQEAGIA  180

Query  181  SA  182
             A
Sbjct  181  VA  182


>gi|147677689|ref|YP_001211904.1| hypothetical protein PTH_1354 [Pelotomaculum thermopropionicum 
SI]
 gi|147678361|ref|YP_001212576.1| transposase and inactivated derivatives [Pelotomaculum thermopropionicum 
SI]
 gi|146273786|dbj|BAF59535.1| hypothetical protein [Pelotomaculum thermopropionicum SI]
 gi|146274458|dbj|BAF60207.1| transposase and inactivated derivatives [Pelotomaculum thermopropionicum 
SI]
Length=450

 Score =  194 bits (493),  Expect = 8e-48, Method: Compositional matrix adjust.
 Identities = 95/176 (54%), Positives = 127/176 (73%), Gaps = 0/176 (0%)

Query  7    DQASLWESVLPEELRRLPEELARVDALLDDSAFFCPFVPFFDPRMGRPSIPMETYLRLMF  66
            +Q SLW++VLPE  R LP ELA++D +LDD  F  PF+  F+ R GRP+IP+ETYLRLM+
Sbjct  7    NQISLWDTVLPESFRSLPAELAKIDDILDDPVFMQPFIAKFNTRRGRPTIPIETYLRLMY  66

Query  67   LKFRYRLGYESLCREVTDSITWRRFCRIPLEGSVPHPTTLMKLTTRCGEDAVAGLNEALL  126
            LK RY+LGYE+L +EV DSITWRRFCRIP++  +P PTTL+K   R G++ V  LNE LL
Sbjct  67   LKRRYQLGYETLIKEVGDSITWRRFCRIPIDEEMPDPTTLIKARQRYGDEVVEQLNELLL  126

Query  127  AKAASEKLLRTNKVRADTTVVEGDVGYPTDTGLLAKAVGSMARTVARIKAADAGSA  182
             K   EK+L+T K+R DTTVVE ++ +PTD  LL   V  + R V++I+   + +A
Sbjct  127  LKLQDEKILKTRKLRVDTTVVESNIHHPTDATLLHDGVKVITRFVSKIRRVASQAA  182


>gi|169830876|ref|YP_001716858.1| putative methyl-accepting chemotaxis sensory transducer [Candidatus 
Desulforudis audaxviator MP104C]
 gi|169831953|ref|YP_001717935.1| putative methyl-accepting chemotaxis sensory transducer [Candidatus 
Desulforudis audaxviator MP104C]
 gi|169831954|ref|YP_001717936.1| putative methyl-accepting chemotaxis sensory transducer [Candidatus 
Desulforudis audaxviator MP104C]
 gi|169831955|ref|YP_001717937.1| putative methyl-accepting chemotaxis sensory transducer [Candidatus 
Desulforudis audaxviator MP104C]
 gi|169637720|gb|ACA59226.1| putative methyl-accepting chemotaxis sensory transducer [Candidatus 
Desulforudis audaxviator MP104C]
 gi|169638797|gb|ACA60303.1| putative methyl-accepting chemotaxis sensory transducer [Candidatus 
Desulforudis audaxviator MP104C]
 gi|169638798|gb|ACA60304.1| putative methyl-accepting chemotaxis sensory transducer [Candidatus 
Desulforudis audaxviator MP104C]
 gi|169638799|gb|ACA60305.1| putative methyl-accepting chemotaxis sensory transducer [Candidatus 
Desulforudis audaxviator MP104C]
Length=464

 Score =  169 bits (428),  Expect = 3e-40, Method: Compositional matrix adjust.
 Identities = 86/182 (48%), Positives = 117/182 (65%), Gaps = 5/182 (2%)

Query  8    QASLWESVLPEELRRLPEELARVDALLDDSAFFCPFVPFFDPRMGRPSIPMETYLRLMFL  67
            Q S  + +LP E+  LPE+LA++DA LDD  FF PF   +   +GRPS+P ETYLR+  L
Sbjct  11   QVSFLDYILPPEVLELPEDLAKLDAWLDDERFFEPFQDKYHRCLGRPSVPAETYLRMTAL  70

Query  68   KFRYRLGYESLCREVTDSITWRRFCRIPLEGSVPHPTTLMKLTTRC---GEDAVAGLNEA  124
            K +YRL    +C  V D I+WRRFCRIP    VPHP++L K+  R    G D +A LN  
Sbjct  71   KHQYRLSDRQVCALVKDRISWRRFCRIPWNKPVPHPSSLTKIRQRLDADGSDHMAALNAH  130

Query  125  LLAKAASEKLLRT-NKVRADTTVVEGDVGYPTDTGLLAKAVGSMARTVARIKA-ADAGSA  182
            L+ KA  EKLL++ NKVR DTT +E ++ +PTD+GL+A +V  + R   +I+A AD  S 
Sbjct  131  LVRKAQEEKLLKSRNKVRVDTTAIEANIHHPTDSGLIADSVRVVTRLAKKIQAVADNTSV  190

Query  183  PL  184
             +
Sbjct  191  AI  192


>gi|253577715|ref|ZP_04855012.1| transposase [Paenibacillus sp. oral taxon 786 str. D14]
 gi|251842893|gb|EES70945.1| transposase [Paenibacillus sp. oral taxon 786 str. D14]
Length=457

 Score =  169 bits (427),  Expect = 4e-40, Method: Compositional matrix adjust.
 Identities = 77/171 (46%), Positives = 112/171 (66%), Gaps = 2/171 (1%)

Query  7    DQASLWESVLPEELRRLPEELARVDALLDDSAFFCPFVPFF--DPRMGRPSIPMETYLRL  64
            +Q ++W+++LPE +R+LP ELA +D LLDD  F  PF        + GRP++ +E Y+RL
Sbjct  10   EQLTIWDAILPESVRKLPVELAIIDQLLDDDRFLQPFTELHPKGKKSGRPTLAIEKYIRL  69

Query  65   MFLKFRYRLGYESLCREVTDSITWRRFCRIPLEGSVPHPTTLMKLTTRCGEDAVAGLNEA  124
            M LK +Y LGYESL +EV DSITWR FCR  ++  +P P+TL+    R G+  V  +N A
Sbjct  70   MVLKHKYNLGYESLVKEVGDSITWRMFCRFAIDEPMPDPSTLIYARKRYGDKIVEDINAA  129

Query  125  LLAKAASEKLLRTNKVRADTTVVEGDVGYPTDTGLLAKAVGSMARTVARIK  175
            L+ +   + +L+T K+R DTTVVE D+ +PTD  LL   V  + RT+ +I+
Sbjct  130  LVKQCEEKAVLKTRKLRTDTTVVESDIHHPTDATLLQDGVKVITRTIQKIR  180


>gi|169830618|ref|YP_001716600.1| hypothetical protein Daud_0420 [Candidatus Desulforudis audaxviator 
MP104C]
 gi|169637462|gb|ACA58968.1| hypothetical protein Daud_0420 [Candidatus Desulforudis audaxviator 
MP104C]
Length=246

 Score =  159 bits (402),  Expect = 3e-37, Method: Compositional matrix adjust.
 Identities = 81/166 (49%), Positives = 108/166 (66%), Gaps = 6/166 (3%)

Query  23   LPEELARVDALLDDSAFFCPFVPFFDPRMGRPSIPMETYLRLMFLKFRYRLGYESLCREV  82
             PE LA++D  LDD  FF PF   +    GRPS+P ETYLR+  L+ +Y L    LC +V
Sbjct  25   FPEHLAKMDRWLDDKRFFTPFQDKYHQFWGRPSVPAETYLRMRALQQQYGLSDRELCDQV  84

Query  83   TDSITWRRFCRIPLEGSVPHPTTLMKLTTRC---GEDAVAGLNEALLAKAASEKLLRT-N  138
             D ++WRRFCRIPL   VPHP+TL K+  R    G D +A LNE L+ KAA EK++++ N
Sbjct  85   GDRLSWRRFCRIPLNKPVPHPSTLSKIRQRLDTNGSDHMAELNEHLVRKAAEEKIIKSRN  144

Query  139  KVRADTTVVEGDVGYPTDTGLLAKAVGSMARTVARIKAA--DAGSA  182
            KVR DTTVVE ++ +PTD+GL+A  V  + R   +I+A   D G+A
Sbjct  145  KVRVDTTVVEANIHHPTDSGLIADTVRVVTRLAKKIQAVAGDTGTA  190


>gi|289749569|ref|ZP_06508947.1| transposase [Mycobacterium tuberculosis T92]
 gi|289690156|gb|EFD57585.1| transposase [Mycobacterium tuberculosis T92]
Length=112

 Score =  152 bits (385),  Expect = 3e-35, Method: Compositional matrix adjust.
 Identities = 72/87 (83%), Positives = 78/87 (90%), Gaps = 0/87 (0%)

Query  1    VFRTVGDQASLWESVLPEELRRLPEELARVDALLDDSAFFCPFVPFFDPRMGRPSIPMET  60
            VFRT+GDQ  LWES+LP+E+RRLPEELARVDALLDD A F PFVPFFDPR GRPS PME 
Sbjct  26   VFRTLGDQCWLWESLLPDEVRRLPEELARVDALLDDPALFAPFVPFFDPRRGRPSTPMEV  85

Query  61   YLRLMFLKFRYRLGYESLCREVTDSIT  87
            YL+LMF+KFRYRLGYESLCREV DSIT
Sbjct  86   YLQLMFVKFRYRLGYESLCREVADSIT  112


>gi|148822245|ref|YP_001286999.1| transposase [Mycobacterium tuberculosis F11]
 gi|167968537|ref|ZP_02550814.1| truncated IS1560 transposase [Mycobacterium tuberculosis H37Ra]
 gi|254231328|ref|ZP_04924655.1| hypothetical protein TBCG_01024 [Mycobacterium tuberculosis C]
 22 more sequence titles
 gi|254550021|ref|ZP_05140468.1| transposase [Mycobacterium tuberculosis '98-R604 INH-RIF-EM']
 gi|289555181|ref|ZP_06444391.1| transposase [Mycobacterium tuberculosis KZN 605]
 gi|289744774|ref|ZP_06504152.1| transposase [Mycobacterium tuberculosis 02_1987]
 gi|308231707|ref|ZP_07413510.2| transposase [Mycobacterium tuberculosis SUMu001]
 gi|308370086|ref|ZP_07420249.2| transposase [Mycobacterium tuberculosis SUMu002]
 gi|308371838|ref|ZP_07426411.2| transposase [Mycobacterium tuberculosis SUMu004]
 gi|308376592|ref|ZP_07439379.2| transposase [Mycobacterium tuberculosis SUMu008]
 gi|308377591|ref|ZP_07479751.2| transposase [Mycobacterium tuberculosis SUMu009]
 gi|308379944|ref|ZP_07488179.2| transposase [Mycobacterium tuberculosis SUMu011]
 gi|124600387|gb|EAY59397.1| hypothetical protein TBCG_01024 [Mycobacterium tuberculosis C]
 gi|148720772|gb|ABR05397.1| transposase [Mycobacterium tuberculosis F11]
 gi|289439813|gb|EFD22306.1| transposase [Mycobacterium tuberculosis KZN 605]
 gi|289685302|gb|EFD52790.1| transposase [Mycobacterium tuberculosis 02_1987]
 gi|308216321|gb|EFO75720.1| transposase [Mycobacterium tuberculosis SUMu001]
 gi|308325367|gb|EFP14218.1| transposase [Mycobacterium tuberculosis SUMu002]
 gi|308335321|gb|EFP24172.1| transposase [Mycobacterium tuberculosis SUMu004]
 gi|308350625|gb|EFP39476.1| transposase [Mycobacterium tuberculosis SUMu008]
 gi|308355258|gb|EFP44109.1| transposase [Mycobacterium tuberculosis SUMu009]
 gi|308363114|gb|EFP51965.1| transposase [Mycobacterium tuberculosis SUMu011]
 gi|323720537|gb|EGB29619.1| transposase [Mycobacterium tuberculosis CDC1551A]
 gi|339294038|gb|AEJ46149.1| transposase [Mycobacterium tuberculosis CCDC5079]
 gi|339297678|gb|AEJ49788.1| transposase [Mycobacterium tuberculosis CCDC5180]
Length=107

 Score =  124 bits (311),  Expect = 1e-26, Method: Compositional matrix adjust.
 Identities = 73/87 (84%), Positives = 79/87 (91%), Gaps = 0/87 (0%)

Query  1    VFRTVGDQASLWESVLPEELRRLPEELARVDALLDDSAFFCPFVPFFDPRMGRPSIPMET  60
            VFRT+GDQ  LWES+LP+E+RRLPEELARVDALLDD AFF PFVPFFDPR GRPS PME 
Sbjct  21   VFRTLGDQCWLWESLLPDEVRRLPEELARVDALLDDPAFFAPFVPFFDPRRGRPSTPMEV  80

Query  61   YLRLMFLKFRYRLGYESLCREVTDSIT  87
            YL+LMF+KFRYRLGYESLCREV DSIT
Sbjct  81   YLQLMFVKFRYRLGYESLCREVADSIT  107


>gi|15608176|ref|NP_215552.1| truncated IS1560 transposase [Mycobacterium tuberculosis H37Rv]
 gi|31792228|ref|NP_854721.1| IS1560 transposase [Mycobacterium bovis AF2122/97]
 gi|121636966|ref|YP_977189.1| putative IS1560 transposase [Mycobacterium bovis BCG str. Pasteur 
1173P2]
 39 more sequence titles
 gi|148660819|ref|YP_001282342.1| truncated IS1560 transposase [Mycobacterium tuberculosis H37Ra]
 gi|224989438|ref|YP_002644125.1| putative IS1560 transposase [Mycobacterium bovis BCG str. Tokyo 
172]
 gi|253799932|ref|YP_003032933.1| transposase [Mycobacterium tuberculosis KZN 1435]
 gi|254363951|ref|ZP_04979997.1| hypothetical IS1560 transposase [Mycobacterium tuberculosis str. 
Haarlem]
 gi|289442459|ref|ZP_06432203.1| transposase [Mycobacterium tuberculosis T46]
 gi|289446617|ref|ZP_06436361.1| transposase [Mycobacterium tuberculosis CPHL_A]
 gi|289573676|ref|ZP_06453903.1| transposase [Mycobacterium tuberculosis K85]
 gi|289753098|ref|ZP_06512476.1| hypothetical protein TBGG_00214 [Mycobacterium tuberculosis EAS054]
 gi|294995225|ref|ZP_06800916.1| transposase [Mycobacterium tuberculosis 210]
 gi|297633565|ref|ZP_06951345.1| transposase [Mycobacterium tuberculosis KZN 4207]
 gi|297730550|ref|ZP_06959668.1| transposase [Mycobacterium tuberculosis KZN R506]
 gi|306783734|ref|ZP_07422056.1| transposase [Mycobacterium tuberculosis SUMu003]
 gi|306792422|ref|ZP_07430724.1| transposase [Mycobacterium tuberculosis SUMu005]
 gi|306796824|ref|ZP_07435126.1| transposase [Mycobacterium tuberculosis SUMu006]
 gi|306806890|ref|ZP_07443558.1| transposase [Mycobacterium tuberculosis SUMu007]
 gi|306971280|ref|ZP_07483941.1| transposase [Mycobacterium tuberculosis SUMu010]
 gi|313657879|ref|ZP_07814759.1| transposase [Mycobacterium tuberculosis KZN V2475]
 gi|339631098|ref|YP_004722740.1| transposase family IS1560 [Mycobacterium africanum GM041182]
 gi|1869992|emb|CAB06843.1| PROBABLE IS1560 TRANSPOSASE (FRAGMENT) [Mycobacterium tuberculosis 
H37Rv]
 gi|31617816|emb|CAD93925.1| PROBABLE IS1560 TRANSPOSASE (FRAGMENT) [Mycobacterium bovis AF2122/97]
 gi|121492613|emb|CAL71081.1| Probable IS1560 transposase (fragment) [Mycobacterium bovis BCG 
str. Pasteur 1173P2]
 gi|134149465|gb|EBA41510.1| hypothetical IS1560 transposase [Mycobacterium tuberculosis str. 
Haarlem]
 gi|148504971|gb|ABQ72780.1| truncated IS1560 transposase [Mycobacterium tuberculosis H37Ra]
 gi|224772551|dbj|BAH25357.1| putative IS1560 transposase [Mycobacterium bovis BCG str. Tokyo 
172]
 gi|253321435|gb|ACT26038.1| transposase [Mycobacterium tuberculosis KZN 1435]
 gi|289415378|gb|EFD12618.1| transposase [Mycobacterium tuberculosis T46]
 gi|289419575|gb|EFD16776.1| transposase [Mycobacterium tuberculosis CPHL_A]
 gi|289538107|gb|EFD42685.1| transposase [Mycobacterium tuberculosis K85]
 gi|289693685|gb|EFD61114.1| hypothetical protein TBGG_00214 [Mycobacterium tuberculosis EAS054]
 gi|308331515|gb|EFP20366.1| transposase [Mycobacterium tuberculosis SUMu003]
 gi|308339129|gb|EFP27980.1| transposase [Mycobacterium tuberculosis SUMu005]
 gi|308342800|gb|EFP31651.1| transposase [Mycobacterium tuberculosis SUMu006]
 gi|308346710|gb|EFP35561.1| transposase [Mycobacterium tuberculosis SUMu007]
 gi|308359212|gb|EFP48063.1| transposase [Mycobacterium tuberculosis SUMu010]
 gi|326904735|gb|EGE51668.1| transposase [Mycobacterium tuberculosis W-148]
 gi|328459676|gb|AEB05099.1| transposase [Mycobacterium tuberculosis KZN 4207]
 gi|339330454|emb|CCC26119.1| putative IS1560 transposase (fragment) [Mycobacterium africanum 
GM041182]
 gi|341600982|emb|CCC63653.1| probable IS1560 transposase (fragment) [Mycobacterium bovis BCG 
str. Moreau RDJ]
 gi|344218863|gb|AEM99493.1| truncated IS1560 transposase [Mycobacterium tuberculosis CTRI-2]
Length=112

 Score =  124 bits (311),  Expect = 1e-26, Method: Compositional matrix adjust.
 Identities = 73/87 (84%), Positives = 79/87 (91%), Gaps = 0/87 (0%)

Query  1    VFRTVGDQASLWESVLPEELRRLPEELARVDALLDDSAFFCPFVPFFDPRMGRPSIPMET  60
            VFRT+GDQ  LWES+LP+E+RRLPEELARVDALLDD AFF PFVPFFDPR GRPS PME 
Sbjct  26   VFRTLGDQCWLWESLLPDEVRRLPEELARVDALLDDPAFFAPFVPFFDPRRGRPSTPMEV  85

Query  61   YLRLMFLKFRYRLGYESLCREVTDSIT  87
            YL+LMF+KFRYRLGYESLCREV DSIT
Sbjct  86   YLQLMFVKFRYRLGYESLCREVADSIT  112


>gi|340626047|ref|YP_004744499.1| putative IS1560 transposase [Mycobacterium canettii CIPT 140010059]
 gi|340004237|emb|CCC43378.1| putative IS1560 transposase (fragment) [Mycobacterium canettii 
CIPT 140010059]
Length=112

 Score =  122 bits (306),  Expect = 5e-26, Method: Compositional matrix adjust.
 Identities = 72/87 (83%), Positives = 79/87 (91%), Gaps = 0/87 (0%)

Query  1    VFRTVGDQASLWESVLPEELRRLPEELARVDALLDDSAFFCPFVPFFDPRMGRPSIPMET  60
            VFRT+GDQ  LWES+LP+E+RRLPEELARVDALLDD AFF PFVPFFDPR GRPS PME 
Sbjct  26   VFRTLGDQCWLWESLLPDEVRRLPEELARVDALLDDPAFFAPFVPFFDPRRGRPSTPMEV  85

Query  61   YLRLMFLKFRYRLGYESLCREVTDSIT  87
            +L+LMF+KFRYRLGYESLCREV DSIT
Sbjct  86   FLQLMFVKFRYRLGYESLCREVADSIT  112


>gi|289761172|ref|ZP_06520550.1| LOW QUALITY PROTEIN: transposase [Mycobacterium tuberculosis 
GM 1503]
 gi|289708678|gb|EFD72694.1| LOW QUALITY PROTEIN: transposase [Mycobacterium tuberculosis 
GM 1503]
Length=239

 Score =  105 bits (262),  Expect = 6e-21, Method: Compositional matrix adjust.
 Identities = 64/89 (72%), Positives = 72/89 (81%), Gaps = 0/89 (0%)

Query  89   RRFCRIPLEGSVPHPTTLMKLTTRCGEDAVAGLNEALLAKAASEKLLRTNKVRADTTVVE  148
            RRFCRI L+GSVPHPTTLMKLTTRCG  A+ GLNEALLAKAA  KLL TN++RADTTV  
Sbjct  1    RRFCRIALDGSVPHPTTLMKLTTRCGSAAIDGLNEALLAKAAEAKLLGTNRIRADTTVAR  60

Query  149  GDVGYPTDTGLLAKAVGSMARTVARIKAA  177
             +V YPTD GLLAKA+  +A T  RI+AA
Sbjct  61   ANVSYPTDLGLLAKAMRRIAATGKRIQAA  89


>gi|240170673|ref|ZP_04749332.1| transposase [Mycobacterium kansasii ATCC 12478]
Length=68

 Score = 84.3 bits (207),  Expect = 1e-14, Method: Compositional matrix adjust.
 Identities = 51/62 (83%), Positives = 54/62 (88%), Gaps = 0/62 (0%)

Query  30  VDALLDDSAFFCPFVPFFDPRMGRPSIPMETYLRLMFLKFRYRLGYESLCREVTDSITWR  89
           +DALLDD AFF PFV FFDPR+GRPS PME YLRLMFLKFRYRLGYESLCREV+DSIT  
Sbjct  1   MDALLDDPAFFAPFVAFFDPRIGRPSTPMEIYLRLMFLKFRYRLGYESLCREVSDSITQP  60

Query  90  RF  91
            F
Sbjct  61  SF  62


>gi|308205890|gb|ADO19302.1| hypothetical protein Nfla_9402 [Nostoc flagelliforme str. Sunitezuoqi]
Length=297

 Score = 84.0 bits (206),  Expect = 2e-14, Method: Compositional matrix adjust.
 Identities = 57/219 (27%), Positives = 104/219 (48%), Gaps = 11/219 (5%)

Query  14   SVLPEELRRLPEELARVDALLDDSAFFCPFVPFFDPRM------GRPSIPMETYLRLMFL  67
            S+L + +  + + +  +D +L D   F         R       GR S P+E  LR++ L
Sbjct  13   SILIQLIGEMDDSIYIIDKVLSDEHLFRLIESDLSKRYQNTTKTGRKSTPVEVVLRMLAL  72

Query  68   KFRYRLGYESLCREVTDSITWRRFCRIPLEGSVPHPTTLMKLTTRCGEDAVAGLNEALLA  127
            K    L YE     V +S+  R+FCRI    ++P+ +TL++ + +  ++ ++  N+ L  
Sbjct  73   KHLRGLSYEQTISNVNESLILRQFCRIYF-NALPNKSTLIRWSHQIRQETLSQFNQRLTQ  131

Query  128  KAASEKLLRTNKVRADTTVVEGDVGYPTDTGLLAKAVGSMARTVARIKAADAGSAPLGGS  187
             A   ++ +  K+R D TVV  ++ +P+D  LL   V  ++R + + K     ++    S
Sbjct  132  VATQLQITKGRKMRTDGTVVATNIHFPSDNSLLLDGVKVISRFLLQAKEISVANSIFINS  191

Query  188  SGPRDRLQAAVTRRAATRSGAGLRAPDHRGASRDRRAGA  226
            S  R+R + A   R  +R   GL +     + R +R  A
Sbjct  192  SLFRNRYRTA---RRISREIDGL-SKTRNQSGRQKREKA  226


>gi|15608175|ref|NP_215551.1| transposase [Mycobacterium tuberculosis H37Rv]
 gi|15840465|ref|NP_335502.1| hypothetical protein MT1065 [Mycobacterium tuberculosis CDC1551]
 gi|31792227|ref|NP_854720.1| transposase [Mycobacterium bovis AF2122/97]
 64 more sequence titles
 gi|121636965|ref|YP_977188.1| putative transposase [Mycobacterium bovis BCG str. Pasteur 1173P2]
 gi|148660818|ref|YP_001282341.1| putative transposase [Mycobacterium tuberculosis H37Ra]
 gi|148822244|ref|YP_001286998.1| transposase [Mycobacterium tuberculosis F11]
 gi|224989437|ref|YP_002644124.1| putative transposase [Mycobacterium bovis BCG str. Tokyo 172]
 gi|253799933|ref|YP_003032934.1| transposase [Mycobacterium tuberculosis KZN 1435]
 gi|254231327|ref|ZP_04924654.1| hypothetical protein TBCG_01023 [Mycobacterium tuberculosis C]
 gi|254363950|ref|ZP_04979996.1| transposase [Mycobacterium tuberculosis str. Haarlem]
 gi|254550020|ref|ZP_05140467.1| transposase [Mycobacterium tuberculosis '98-R604 INH-RIF-EM']
 gi|289446616|ref|ZP_06436360.1| transposase [Mycobacterium tuberculosis CPHL_A]
 gi|289555182|ref|ZP_06444392.1| transposase [Mycobacterium tuberculosis KZN 605]
 gi|289573675|ref|ZP_06453902.1| transposase [Mycobacterium tuberculosis K85]
 gi|289744773|ref|ZP_06504151.1| transposase [Mycobacterium tuberculosis 02_1987]
 gi|289753097|ref|ZP_06512475.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
 gi|289757120|ref|ZP_06516498.1| transposase [Mycobacterium tuberculosis T85]
 gi|294995224|ref|ZP_06800915.1| transposase [Mycobacterium tuberculosis 210]
 gi|297633564|ref|ZP_06951344.1| transposase [Mycobacterium tuberculosis KZN 4207]
 gi|298524533|ref|ZP_07011942.1| transposase [Mycobacterium tuberculosis 94_M4241A]
 gi|306775172|ref|ZP_07413509.1| transposase [Mycobacterium tuberculosis SUMu001]
 gi|306788088|ref|ZP_07426410.1| transposase [Mycobacterium tuberculosis SUMu004]
 gi|306806889|ref|ZP_07443557.1| transposase [Mycobacterium tuberculosis SUMu007]
 gi|306967089|ref|ZP_07479750.1| transposase [Mycobacterium tuberculosis SUMu009]
 gi|306971279|ref|ZP_07483940.1| transposase [Mycobacterium tuberculosis SUMu010]
 gi|307079008|ref|ZP_07488178.1| transposase [Mycobacterium tuberculosis SUMu011]
 gi|308370087|ref|ZP_07666861.1| transposase [Mycobacterium tuberculosis SUMu002]
 gi|308370586|ref|ZP_07666972.1| transposase [Mycobacterium tuberculosis SUMu003]
 gi|308373007|ref|ZP_07667492.1| transposase [Mycobacterium tuberculosis SUMu005]
 gi|308374177|ref|ZP_07667728.1| transposase [Mycobacterium tuberculosis SUMu006]
 gi|308376591|ref|ZP_07668305.1| transposase [Mycobacterium tuberculosis SUMu008]
 gi|339631097|ref|YP_004722739.1| transposase [Mycobacterium africanum GM041182]
 gi|1869993|emb|CAB06844.1| PROBABLE TRANSPOSASE (FRAGMENT) [Mycobacterium tuberculosis H37Rv]
 gi|13880638|gb|AAK45316.1| hypothetical protein MT1065 [Mycobacterium tuberculosis CDC1551]
 gi|31617815|emb|CAD93924.1| PROBABLE TRANSPOSASE (FRAGMENT) [Mycobacterium bovis AF2122/97]
 gi|121492612|emb|CAL71080.1| Probable transposase (fragment) [Mycobacterium bovis BCG str. 
Pasteur 1173P2]
 gi|124600386|gb|EAY59396.1| hypothetical protein TBCG_01023 [Mycobacterium tuberculosis C]
 gi|134149464|gb|EBA41509.1| transposase [Mycobacterium tuberculosis str. Haarlem]
 gi|148504970|gb|ABQ72779.1| putative transposase [Mycobacterium tuberculosis H37Ra]
 gi|148720771|gb|ABR05396.1| transposase [Mycobacterium tuberculosis F11]
 gi|224772550|dbj|BAH25356.1| putative transposase [Mycobacterium bovis BCG str. Tokyo 172]
 gi|253321436|gb|ACT26039.1| transposase [Mycobacterium tuberculosis KZN 1435]
 gi|289419574|gb|EFD16775.1| transposase [Mycobacterium tuberculosis CPHL_A]
 gi|289439814|gb|EFD22307.1| transposase [Mycobacterium tuberculosis KZN 605]
 gi|289538106|gb|EFD42684.1| transposase [Mycobacterium tuberculosis K85]
 gi|289685301|gb|EFD52789.1| transposase [Mycobacterium tuberculosis 02_1987]
 gi|289693684|gb|EFD61113.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
 gi|289712684|gb|EFD76696.1| transposase [Mycobacterium tuberculosis T85]
 gi|298494327|gb|EFI29621.1| transposase [Mycobacterium tuberculosis 94_M4241A]
 gi|308216320|gb|EFO75719.1| transposase [Mycobacterium tuberculosis SUMu001]
 gi|308325368|gb|EFP14219.1| transposase [Mycobacterium tuberculosis SUMu002]
 gi|308331514|gb|EFP20365.1| transposase [Mycobacterium tuberculosis SUMu003]
 gi|308335320|gb|EFP24171.1| transposase [Mycobacterium tuberculosis SUMu004]
 gi|308339128|gb|EFP27979.1| transposase [Mycobacterium tuberculosis SUMu005]
 gi|308342799|gb|EFP31650.1| transposase [Mycobacterium tuberculosis SUMu006]
 gi|308346709|gb|EFP35560.1| transposase [Mycobacterium tuberculosis SUMu007]
 gi|308350624|gb|EFP39475.1| transposase [Mycobacterium tuberculosis SUMu008]
 gi|308355257|gb|EFP44108.1| transposase [Mycobacterium tuberculosis SUMu009]
 gi|308359211|gb|EFP48062.1| transposase [Mycobacterium tuberculosis SUMu010]
 gi|308363113|gb|EFP51964.1| transposase [Mycobacterium tuberculosis SUMu011]
 gi|323720536|gb|EGB29618.1| transposase [Mycobacterium tuberculosis CDC1551A]
 gi|326904736|gb|EGE51669.1| transposase [Mycobacterium tuberculosis W-148]
 gi|328459677|gb|AEB05100.1| transposase [Mycobacterium tuberculosis KZN 4207]
 gi|339294037|gb|AEJ46148.1| transposase [Mycobacterium tuberculosis CCDC5079]
 gi|339330453|emb|CCC26118.1| putative transposase (fragment) [Mycobacterium africanum GM041182]
 gi|341600981|emb|CCC63652.1| probable transposase (fragment) [Mycobacterium bovis BCG str. 
Moreau RDJ]
 gi|344218862|gb|AEM99492.1| transposase [Mycobacterium tuberculosis CTRI-2]
Length=228

 Score = 83.6 bits (205),  Expect = 2e-14, Method: Compositional matrix adjust.
 Identities = 54/78 (70%), Positives = 62/78 (80%), Gaps = 0/78 (0%)

Query  100  VPHPTTLMKLTTRCGEDAVAGLNEALLAKAASEKLLRTNKVRADTTVVEGDVGYPTDTGL  159
            +PHPTTLMKLTTRCG  A+ GLNEALLAKAA  KLL TN++RADTTV   +V YPTD GL
Sbjct  1    MPHPTTLMKLTTRCGSAAIDGLNEALLAKAAEAKLLGTNRIRADTTVARANVSYPTDLGL  60

Query  160  LAKAVGSMARTVARIKAA  177
            LAKA+  +A T  RI+AA
Sbjct  61   LAKAMRRIAATGKRIQAA  78


>gi|339297677|gb|AEJ49787.1| transposase [Mycobacterium tuberculosis CCDC5180]
Length=228

 Score = 83.6 bits (205),  Expect = 2e-14, Method: Compositional matrix adjust.
 Identities = 54/78 (70%), Positives = 62/78 (80%), Gaps = 0/78 (0%)

Query  100  VPHPTTLMKLTTRCGEDAVAGLNEALLAKAASEKLLRTNKVRADTTVVEGDVGYPTDTGL  159
            +PHPTTLMKLTTRCG  A+ GLNEALLAKAA  KLL TN++RADTTV   +V YPTD GL
Sbjct  1    MPHPTTLMKLTTRCGSAAIDGLNEALLAKAAEAKLLGTNRIRADTTVARANVSYPTDLGL  60

Query  160  LAKAVGSMARTVARIKAA  177
            LAKA+  +A T  RI+AA
Sbjct  61   LAKAMRRIAATGKRIQAA  78


>gi|206603356|gb|EDZ39836.1| Transposase [Leptospirillum sp. Group II '5-way CG']
Length=455

 Score = 83.2 bits (204),  Expect = 3e-14, Method: Compositional matrix adjust.
 Identities = 50/171 (30%), Positives = 82/171 (48%), Gaps = 4/171 (2%)

Query  8    QASLWESVLPEELRRLPEE-LARVDALLDDSAFFCPFVPFFDPRMGRPSIPMETYLRLMF  66
            Q SL++ +    +   PE  L ++   +D +A      P++ P  GRP+ P    + LM 
Sbjct  8    QPSLFQWIADRHVN--PEHPLMKLSEKIDWAAIDGVLAPYYSPGKGRPAKPTRLMVGLMI  65

Query  67   LKFRYRLGYESLCREVTDSITWRRFCRIPL-EGSVPHPTTLMKLTTRCGEDAVAGLNEAL  125
            LK R+ L  E++   + ++  W  FCR+P  E      +TL K   R G +    +   +
Sbjct  66   LKHRFDLSDEAVVSGLHENFVWMAFCRVPADEAQHVESSTLCKFRKRLGPEGTQAVEAVI  125

Query  126  LAKAASEKLLRTNKVRADTTVVEGDVGYPTDTGLLAKAVGSMARTVARIKA  176
              +      +R   +R DTT +E ++ YPTD GLL K+   + R V + KA
Sbjct  126  RDQMIQAGAIRRQVMRVDTTAMEKNIAYPTDVGLLQKSRTRVLRLVQKAKA  176


>gi|124515920|gb|EAY57429.1| putative transposase [Leptospirillum rubarum]
Length=455

 Score = 83.2 bits (204),  Expect = 3e-14, Method: Compositional matrix adjust.
 Identities = 50/171 (30%), Positives = 82/171 (48%), Gaps = 4/171 (2%)

Query  8    QASLWESVLPEELRRLPEE-LARVDALLDDSAFFCPFVPFFDPRMGRPSIPMETYLRLMF  66
            Q SL++ +    +   PE  L ++   +D +A      P++ P  GRP+ P    + LM 
Sbjct  8    QPSLFQWIADRHVN--PEHPLMKLSEKIDWAAIDGVLAPYYSPGKGRPAKPTRLMVGLMI  65

Query  67   LKFRYRLGYESLCREVTDSITWRRFCRIPL-EGSVPHPTTLMKLTTRCGEDAVAGLNEAL  125
            LK R+ L  E++   + ++  W  FCR+P  E      +TL K   R G +    +   +
Sbjct  66   LKHRFDLSDEAVVSGLHENFVWMAFCRVPADEAQHVESSTLCKFRKRLGPEGTQAVEAVI  125

Query  126  LAKAASEKLLRTNKVRADTTVVEGDVGYPTDTGLLAKAVGSMARTVARIKA  176
              +      +R   +R DTT +E ++ YPTD GLL K+   + R V + KA
Sbjct  126  RDQMIQAGAIRRQVMRVDTTAMEKNIAYPTDVGLLQKSRTRVLRLVQKAKA  176


>gi|124516354|gb|EAY57862.1| transposase [Leptospirillum rubarum]
Length=455

 Score = 83.2 bits (204),  Expect = 3e-14, Method: Compositional matrix adjust.
 Identities = 50/171 (30%), Positives = 82/171 (48%), Gaps = 4/171 (2%)

Query  8    QASLWESVLPEELRRLPEE-LARVDALLDDSAFFCPFVPFFDPRMGRPSIPMETYLRLMF  66
            Q SL++ +    +   PE  L ++   +D +A      P++ P  GRP+ P    + LM 
Sbjct  8    QPSLFQWIADRHVN--PEHPLMKLSEKIDWAAIDGVLAPYYSPGKGRPAKPTRLMVGLMI  65

Query  67   LKFRYRLGYESLCREVTDSITWRRFCRIPL-EGSVPHPTTLMKLTTRCGEDAVAGLNEAL  125
            LK R+ L  E++   + ++  W  FCR+P  E      +TL K   R G +    +   +
Sbjct  66   LKHRFDLSDEAVVSGLHENFVWMAFCRVPADEAQHVESSTLCKFRKRLGPEGTQAVEAVI  125

Query  126  LAKAASEKLLRTNKVRADTTVVEGDVGYPTDTGLLAKAVGSMARTVARIKA  176
              +      +R   +R DTT +E ++ YPTD GLL K+   + R V + KA
Sbjct  126  RDQMIQAGAIRRQVMRVDTTAMEKNIAYPTDVGLLQKSRTRVLRLVQKAKA  176


>gi|124514920|gb|EAY56431.1| probable transposase [Leptospirillum rubarum]
Length=263

 Score = 82.8 bits (203),  Expect = 4e-14, Method: Compositional matrix adjust.
 Identities = 50/171 (30%), Positives = 82/171 (48%), Gaps = 4/171 (2%)

Query  8    QASLWESVLPEELRRLPEE-LARVDALLDDSAFFCPFVPFFDPRMGRPSIPMETYLRLMF  66
            Q SL++ +    +   PE  L ++   +D +A      P++ P  GRP+ P    + LM 
Sbjct  8    QPSLFQWIADRHVN--PEHPLMKLSEKIDWAAIDGVLAPYYSPGKGRPAKPTRLMVGLMI  65

Query  67   LKFRYRLGYESLCREVTDSITWRRFCRIPL-EGSVPHPTTLMKLTTRCGEDAVAGLNEAL  125
            LK R+ L  E++   + ++  W  FCR+P  E      +TL K   R G +    +   +
Sbjct  66   LKHRFDLSDEAVVSGLHENFVWMAFCRVPADEAQHVESSTLCKFRKRLGPEGTQAVEAVI  125

Query  126  LAKAASEKLLRTNKVRADTTVVEGDVGYPTDTGLLAKAVGSMARTVARIKA  176
              +      +R   +R DTT +E ++ YPTD GLL K+   + R V + KA
Sbjct  126  RDQMIQAGAIRRQVMRVDTTAMEKNIAYPTDVGLLQKSRTRVLRLVQKAKA  176


>gi|340626046|ref|YP_004744498.1| putative transposase (fragment) [Mycobacterium canettii CIPT 
140010059]
 gi|340004236|emb|CCC43377.1| putative transposase (fragment) [Mycobacterium canettii CIPT 
140010059]
Length=229

 Score = 82.8 bits (203),  Expect = 4e-14, Method: Compositional matrix adjust.
 Identities = 54/78 (70%), Positives = 62/78 (80%), Gaps = 0/78 (0%)

Query  100  VPHPTTLMKLTTRCGEDAVAGLNEALLAKAASEKLLRTNKVRADTTVVEGDVGYPTDTGL  159
            +PHPTTLMKLTTRCG  A+ GLNEALLAKAA  KLL TN++RADTTV   +V YPTD GL
Sbjct  1    MPHPTTLMKLTTRCGSAAIDGLNEALLAKAAEAKLLGTNRIRADTTVAPANVSYPTDLGL  60

Query  160  LAKAVGSMARTVARIKAA  177
            LAKA+  +A T  RI+AA
Sbjct  61   LAKAMRRIAATGKRIQAA  78


>gi|124514574|gb|EAY56086.1| probable transposase [Leptospirillum rubarum]
Length=234

 Score = 82.4 bits (202),  Expect = 5e-14, Method: Compositional matrix adjust.
 Identities = 50/171 (30%), Positives = 82/171 (48%), Gaps = 4/171 (2%)

Query  8    QASLWESVLPEELRRLPEE-LARVDALLDDSAFFCPFVPFFDPRMGRPSIPMETYLRLMF  66
            Q SL++ +    +   PE  L ++   +D +A      P++ P  GRP+ P    + LM 
Sbjct  8    QPSLFQWIADRHVN--PEHPLMKLSEKIDWAAIDGVLAPYYSPGKGRPAKPTRLMVGLMI  65

Query  67   LKFRYRLGYESLCREVTDSITWRRFCRIPL-EGSVPHPTTLMKLTTRCGEDAVAGLNEAL  125
            LK R+ L  E++   + ++  W  FCR+P  E      +TL K   R G +    +   +
Sbjct  66   LKHRFDLSDEAVVSGLHENFVWMAFCRVPADEAQHVESSTLCKFRKRLGPEGTQAVEAVI  125

Query  126  LAKAASEKLLRTNKVRADTTVVEGDVGYPTDTGLLAKAVGSMARTVARIKA  176
              +      +R   +R DTT +E ++ YPTD GLL K+   + R V + KA
Sbjct  126  RDQMIQAGAIRRQVMRVDTTAMEKNIAYPTDVGLLQKSRTRVLRLVQKAKA  176


>gi|124515502|gb|EAY57012.1| probable transposase [Leptospirillum rubarum]
Length=225

 Score = 82.0 bits (201),  Expect = 6e-14, Method: Compositional matrix adjust.
 Identities = 50/171 (30%), Positives = 82/171 (48%), Gaps = 4/171 (2%)

Query  8    QASLWESVLPEELRRLPEE-LARVDALLDDSAFFCPFVPFFDPRMGRPSIPMETYLRLMF  66
            Q SL++ +    +   PE  L ++   +D +A      P++ P  GRP+ P    + LM 
Sbjct  8    QPSLFQWIADRHVN--PEHPLMKLSEKIDWAAIDGVLAPYYSPGKGRPAKPTRLMVGLMI  65

Query  67   LKFRYRLGYESLCREVTDSITWRRFCRIPL-EGSVPHPTTLMKLTTRCGEDAVAGLNEAL  125
            LK R+ L  E++   + ++  W  FCR+P  E      +TL K   R G +    +   +
Sbjct  66   LKHRFDLSDEAVVSGLHENFVWMAFCRVPADEAQHVESSTLCKFRKRLGPEGTQAVEAVI  125

Query  126  LAKAASEKLLRTNKVRADTTVVEGDVGYPTDTGLLAKAVGSMARTVARIKA  176
              +      +R   +R DTT +E ++ YPTD GLL K+   + R V + KA
Sbjct  126  RDQMIQAGAIRRQVMRVDTTAMEKNIAYPTDVGLLQKSRTRVLRLVQKAKA  176


>gi|124515153|gb|EAY56664.1| probable transposase [Leptospirillum rubarum]
Length=294

 Score = 82.0 bits (201),  Expect = 6e-14, Method: Compositional matrix adjust.
 Identities = 50/171 (30%), Positives = 82/171 (48%), Gaps = 4/171 (2%)

Query  8    QASLWESVLPEELRRLPEE-LARVDALLDDSAFFCPFVPFFDPRMGRPSIPMETYLRLMF  66
            Q SL++ +    +   PE  L ++   +D +A      P++ P  GRP+ P    + LM 
Sbjct  8    QPSLFQWIADRHVN--PEHPLMKLSEKIDWAAIDGVLAPYYSPGKGRPAKPTRLMVGLMI  65

Query  67   LKFRYRLGYESLCREVTDSITWRRFCRIPL-EGSVPHPTTLMKLTTRCGEDAVAGLNEAL  125
            LK R+ L  E++   + ++  W  FCR+P  E      +TL K   R G +    +   +
Sbjct  66   LKHRFDLSDEAVVSGLHENFVWMAFCRVPADEAQHVESSTLCKFRKRLGPEGTQAVEAVI  125

Query  126  LAKAASEKLLRTNKVRADTTVVEGDVGYPTDTGLLAKAVGSMARTVARIKA  176
              +      +R   +R DTT +E ++ YPTD GLL K+   + R V + KA
Sbjct  126  RDQMIQAGAIRRQVMRVDTTAMEKNIAYPTDVGLLQKSRTRVLRLVQKAKA  176


>gi|124515160|gb|EAY56671.1| probable transposase [Leptospirillum rubarum]
Length=216

 Score = 82.0 bits (201),  Expect = 6e-14, Method: Compositional matrix adjust.
 Identities = 50/171 (30%), Positives = 82/171 (48%), Gaps = 4/171 (2%)

Query  8    QASLWESVLPEELRRLPEE-LARVDALLDDSAFFCPFVPFFDPRMGRPSIPMETYLRLMF  66
            Q SL++ +    +   PE  L ++   +D +A      P++ P  GRP+ P    + LM 
Sbjct  8    QPSLFQWIADRHVN--PEHPLMKLSEKIDWAAIDGVLAPYYSPGKGRPAKPTRLMVGLMI  65

Query  67   LKFRYRLGYESLCREVTDSITWRRFCRIPL-EGSVPHPTTLMKLTTRCGEDAVAGLNEAL  125
            LK R+ L  E++   + ++  W  FCR+P  E      +TL K   R G +    +   +
Sbjct  66   LKHRFDLSDEAVVSGLHENFVWMAFCRVPADEAQHVESSTLCKFRKRLGPEGTQAVEAVI  125

Query  126  LAKAASEKLLRTNKVRADTTVVEGDVGYPTDTGLLAKAVGSMARTVARIKA  176
              +      +R   +R DTT +E ++ YPTD GLL K+   + R V + KA
Sbjct  126  RDQMIQAGAIRRQVMRVDTTAMEKNIAYPTDVGLLQKSRTRVLRLVQKAKA  176


>gi|289442458|ref|ZP_06432202.1| transposase [Mycobacterium tuberculosis T46]
 gi|289569016|ref|ZP_06449243.1| transposase [Mycobacterium tuberculosis T17]
 gi|289749568|ref|ZP_06508946.1| transposase [Mycobacterium tuberculosis T92]
 gi|289415377|gb|EFD12617.1| transposase [Mycobacterium tuberculosis T46]
 gi|289542770|gb|EFD46418.1| transposase [Mycobacterium tuberculosis T17]
 gi|289690155|gb|EFD57584.1| transposase [Mycobacterium tuberculosis T92]
Length=228

 Score = 82.0 bits (201),  Expect = 7e-14, Method: Compositional matrix adjust.
 Identities = 53/78 (68%), Positives = 61/78 (79%), Gaps = 0/78 (0%)

Query  100  VPHPTTLMKLTTRCGEDAVAGLNEALLAKAASEKLLRTNKVRADTTVVEGDVGYPTDTGL  159
            +PHPTTLMKLTTRCG  A+ GLNEALLAKAA  KLL TN++RADTTV   +V YPTD GL
Sbjct  1    MPHPTTLMKLTTRCGSAAIDGLNEALLAKAAEAKLLGTNRIRADTTVARANVSYPTDLGL  60

Query  160  LAKAVGSMARTVARIKAA  177
            LAKA+  +A    RI+AA
Sbjct  61   LAKAMRRIAAIGKRIQAA  78


>gi|124515144|gb|EAY56655.1| probable transposase [Leptospirillum rubarum]
Length=182

 Score = 81.6 bits (200),  Expect = 9e-14, Method: Compositional matrix adjust.
 Identities = 50/171 (30%), Positives = 82/171 (48%), Gaps = 4/171 (2%)

Query  8    QASLWESVLPEELRRLPEE-LARVDALLDDSAFFCPFVPFFDPRMGRPSIPMETYLRLMF  66
            Q SL++ +    +   PE  L ++   +D +A      P++ P  GRP+ P    + LM 
Sbjct  8    QPSLFQWIADRHVN--PEHPLMKLSEKIDWAAIDGVLAPYYSPGKGRPAKPTRLMVGLMI  65

Query  67   LKFRYRLGYESLCREVTDSITWRRFCRIPL-EGSVPHPTTLMKLTTRCGEDAVAGLNEAL  125
            LK R+ L  E++   + ++  W  FCR+P  E      +TL K   R G +    +   +
Sbjct  66   LKHRFDLSDEAVVSGLHENFVWMAFCRVPADEAQHVESSTLCKFRKRLGPEGTQAVEAVI  125

Query  126  LAKAASEKLLRTNKVRADTTVVEGDVGYPTDTGLLAKAVGSMARTVARIKA  176
              +      +R   +R DTT +E ++ YPTD GLL K+   + R V + KA
Sbjct  126  RDQMIQAGAIRRQVMRVDTTAMEKNIAYPTDVGLLQKSRTRVLRLVQKAKA  176


>gi|124516508|gb|EAY58016.1| transposase [Leptospirillum rubarum]
Length=202

 Score = 81.3 bits (199),  Expect = 1e-13, Method: Compositional matrix adjust.
 Identities = 50/171 (30%), Positives = 82/171 (48%), Gaps = 4/171 (2%)

Query  8    QASLWESVLPEELRRLPEE-LARVDALLDDSAFFCPFVPFFDPRMGRPSIPMETYLRLMF  66
            Q SL++ +    +   PE  L ++   +D +A      P++ P  GRP+ P    + LM 
Sbjct  8    QPSLFQWIADRHVN--PEHPLMKLSEKIDWAAIDGVLAPYYSPGKGRPAKPTRLMVGLMI  65

Query  67   LKFRYRLGYESLCREVTDSITWRRFCRIPL-EGSVPHPTTLMKLTTRCGEDAVAGLNEAL  125
            LK R+ L  E++   + ++  W  FCR+P  E      +TL K   R G +    +   +
Sbjct  66   LKHRFDLSDEAVVSGLHENFVWMAFCRVPADEAQHVESSTLCKFRKRLGPEGTQAVEAVI  125

Query  126  LAKAASEKLLRTNKVRADTTVVEGDVGYPTDTGLLAKAVGSMARTVARIKA  176
              +      +R   +R DTT +E ++ YPTD GLL K+   + R V + KA
Sbjct  126  RDQMIQAGAIRRQVMRVDTTAMEKNIAYPTDVGLLQKSRTRVLRLVQKAKA  176


>gi|124514490|gb|EAY56003.1| probable transposase [Leptospirillum rubarum]
Length=197

 Score = 81.3 bits (199),  Expect = 1e-13, Method: Compositional matrix adjust.
 Identities = 50/171 (30%), Positives = 82/171 (48%), Gaps = 4/171 (2%)

Query  8    QASLWESVLPEELRRLPEE-LARVDALLDDSAFFCPFVPFFDPRMGRPSIPMETYLRLMF  66
            Q SL++ +    +   PE  L ++   +D +A      P++ P  GRP+ P    + LM 
Sbjct  8    QPSLFQWIADRHVN--PEHPLMKLSEKIDWAAIDGVLAPYYSPGKGRPAKPTRLMVGLMI  65

Query  67   LKFRYRLGYESLCREVTDSITWRRFCRIPL-EGSVPHPTTLMKLTTRCGEDAVAGLNEAL  125
            LK R+ L  E++   + ++  W  FCR+P  E      +TL K   R G +    +   +
Sbjct  66   LKHRFDLSDEAVVSGLHENFVWMAFCRVPADEAQHVESSTLCKFRKRLGPEGTQAVEAVI  125

Query  126  LAKAASEKLLRTNKVRADTTVVEGDVGYPTDTGLLAKAVGSMARTVARIKA  176
              +      +R   +R DTT +E ++ YPTD GLL K+   + R V + KA
Sbjct  126  RDQMIQAGAIRRQVMRVDTTAMEKNIAYPTDVGLLQKSRTRVLRLVQKAKA  176


>gi|189426709|ref|YP_001953885.1| transposase IS4 family protein [Geobacter lovleyi SZ]
 gi|189422968|gb|ACD97365.1| transposase IS4 family protein [Geobacter lovleyi SZ]
Length=442

 Score = 79.3 bits (194),  Expect = 4e-13, Method: Compositional matrix adjust.
 Identities = 55/169 (33%), Positives = 79/169 (47%), Gaps = 16/169 (9%)

Query  5    VGDQASLWESVLPEELRRLPEELARVDALLDDSAFFCPFVPFFDPRMGRPSIPMETYLRL  64
            + DQ  L+ S L + L R   EL R+   +D   F   F P +  +MGRP +P+   + L
Sbjct  7    ISDQGDLFRSRLDQMLDR-QHELYRLADQIDWQFFEREFGPLYSVKMGRPGVPIRLLVGL  65

Query  65   MFLKFRYRLGYESLCREVTDSITWRRFC-------RIPLEGSVPHPTTLMKLTTRCGEDA  117
             +LK  +    ES+     ++  W+ FC       R+PL+     PTTL+K   R G   
Sbjct  66   HYLKHAFNESDESVVARFVENPYWQYFCGFEFFQHRLPLD-----PTTLVKWRKRIGSKG  120

Query  118  VAGLNEALLAKAASEKLL---RTNKVRADTTVVEGDVGYPTDTGLLAKA  163
            V  L +A +A A     +      +V  DTTV E  + YPTD  L  KA
Sbjct  121  VEKLLQATIATAVRRNDITPQSLERVNVDTTVQEKAIAYPTDARLYHKA  169


>gi|298248375|ref|ZP_06972180.1| transposase IS4 family protein [Ktedonobacter racemifer DSM 44963]
 gi|297551034|gb|EFH84900.1| transposase IS4 family protein [Ktedonobacter racemifer DSM 44963]
Length=461

 Score = 79.0 bits (193),  Expect = 6e-13, Method: Compositional matrix adjust.
 Identities = 44/130 (34%), Positives = 69/130 (54%), Gaps = 1/130 (0%)

Query  52   GRPSIPMETYLRLMFLKFRYRLGYESLCREVTDSITWRRFCRIPLEGSVPHPTTLMKLTT  111
            GR S P+E  LR++  K  Y+  ++     V DS+  R FCR+  E  VP  TTL++   
Sbjct  57   GRHSTPVEVILRMLICKHLYQWSFQETEERVKDSLVLRWFCRVYFE-RVPDDTTLIRWAH  115

Query  112  RCGEDAVAGLNEALLAKAASEKLLRTNKVRADTTVVEGDVGYPTDTGLLAKAVGSMARTV  171
                + V  LN+ ++  A   K+    K+R D T V+ ++ +PTD+GLL   V +++R V
Sbjct  116  TIRPETVHTLNDRVVHLARQAKVTSGRKLRLDATCVQTNIHHPTDSGLLVDGVRALSRFV  175

Query  172  ARIKAADAGS  181
             R K    G+
Sbjct  176  QRAKPLVEGT  185


>gi|298248369|ref|ZP_06972174.1| transposase IS4 family protein [Ktedonobacter racemifer DSM 44963]
 gi|297551028|gb|EFH84894.1| transposase IS4 family protein [Ktedonobacter racemifer DSM 44963]
Length=461

 Score = 78.6 bits (192),  Expect = 8e-13, Method: Compositional matrix adjust.
 Identities = 44/130 (34%), Positives = 69/130 (54%), Gaps = 1/130 (0%)

Query  52   GRPSIPMETYLRLMFLKFRYRLGYESLCREVTDSITWRRFCRIPLEGSVPHPTTLMKLTT  111
            GR S P+E  LR++  K  Y+  ++     V DS+  R FCR+  E  VP  TTL++   
Sbjct  57   GRHSTPVEVILRMLICKHLYQWSFQETEERVKDSLVLRWFCRVYFE-RVPDDTTLIRWAH  115

Query  112  RCGEDAVAGLNEALLAKAASEKLLRTNKVRADTTVVEGDVGYPTDTGLLAKAVGSMARTV  171
                + V  LN+ ++  A   K+    K+R D T V+ ++ +PTD+GLL  +V  ++R V
Sbjct  116  TIRPETVHTLNDRVVHLARQAKVTSGRKLRLDATCVQTNIHHPTDSGLLVDSVRVLSRFV  175

Query  172  ARIKAADAGS  181
             R K    G+
Sbjct  176  QRAKPLVEGT  185


>gi|298241044|ref|ZP_06964851.1| transposase IS4 family protein [Ktedonobacter racemifer DSM 44963]
 gi|297554098|gb|EFH87962.1| transposase IS4 family protein [Ktedonobacter racemifer DSM 44963]
Length=461

 Score = 77.8 bits (190),  Expect = 1e-12, Method: Compositional matrix adjust.
 Identities = 44/130 (34%), Positives = 68/130 (53%), Gaps = 1/130 (0%)

Query  52   GRPSIPMETYLRLMFLKFRYRLGYESLCREVTDSITWRRFCRIPLEGSVPHPTTLMKLTT  111
            GR S P+E  LR++  K  Y+  ++     V DS+  R FCR+  E  VP  TTL++   
Sbjct  57   GRHSTPVEVILRMLICKHLYQWSFQETEERVKDSLVLRWFCRVYFE-RVPDDTTLIRWAH  115

Query  112  RCGEDAVAGLNEALLAKAASEKLLRTNKVRADTTVVEGDVGYPTDTGLLAKAVGSMARTV  171
                + V  LN+ ++  A   K+    K+R D T V+ ++ +PTD+GLL   V  ++R V
Sbjct  116  TIRPETVHTLNDRVVHLARQAKVTSGRKLRLDATCVQTNIHHPTDSGLLVDGVRVLSRFV  175

Query  172  ARIKAADAGS  181
             R K    G+
Sbjct  176  QRAKPLVEGT  185


>gi|189502523|ref|YP_001958240.1| hypothetical protein Aasi_1178 [Candidatus Amoebophilus asiaticus 
5a2]
 gi|189497964|gb|ACE06511.1| hypothetical protein Aasi_1178 [Candidatus Amoebophilus asiaticus 
5a2]
Length=512

 Score = 71.2 bits (173),  Expect = 1e-10, Method: Compositional matrix adjust.
 Identities = 43/165 (27%), Positives = 80/165 (49%), Gaps = 3/165 (1%)

Query  27   LARVDALLDDSAFFCPFVPFFDPRMGRPSIPMETYLRLMFLKFRYRLGYES-LCREVTDS  85
            L++V+  +D S      +  ++ + GRPSI  E + R++ + + Y +  +  +C+E+  +
Sbjct  21   LSKVNKYIDLSFTHQLVIASYNSKHGRPSIDPEIFFRMLMISYFYNINSDRRVCQEIRYN  80

Query  86   ITWRRFCRIPLEGSVPHPTTLMKLTTRCGEDAVAGLNEALLAKAASEKLLRTNKVRADTT  145
            + +R FC++ LE  VP  + L +   R GE     L   +L       LL +N V  D+T
Sbjct  81   VAYRWFCKLGLEDKVPDHSYLSRTRNRFGEKVFEALFTTILNLCRKHGLLESNSVMTDST  140

Query  146  VVEGDVGYPTDTGLLAKAVG--SMARTVARIKAADAGSAPLGGSS  188
            +++ +    + T + AKA     +AR  A  K     S  +  S+
Sbjct  141  LIKANASLNSLTPIEAKAAAYEKVARKAAINKLGPPASRSISNST  185


>gi|189502330|ref|YP_001958047.1| hypothetical protein Aasi_0960 [Candidatus Amoebophilus asiaticus 
5a2]
 gi|189497771|gb|ACE06318.1| hypothetical protein Aasi_0960 [Candidatus Amoebophilus asiaticus 
5a2]
Length=461

 Score = 71.2 bits (173),  Expect = 1e-10, Method: Compositional matrix adjust.
 Identities = 43/165 (27%), Positives = 80/165 (49%), Gaps = 3/165 (1%)

Query  27   LARVDALLDDSAFFCPFVPFFDPRMGRPSIPMETYLRLMFLKFRYRLGYES-LCREVTDS  85
            L++V+  +D S      +  ++ + GRPSI  E + R++ + + Y +  +  +C+E+  +
Sbjct  21   LSKVNKYIDLSFTHQLVIASYNSKHGRPSIDPEIFFRMLMISYFYNINSDRRVCQEIRYN  80

Query  86   ITWRRFCRIPLEGSVPHPTTLMKLTTRCGEDAVAGLNEALLAKAASEKLLRTNKVRADTT  145
            + +R FC++ LE  VP  + L +   R GE     L   +L       LL +N V  D+T
Sbjct  81   VAYRWFCKLGLEDKVPDHSYLSRTRNRFGEKVFEALFTTILNLCRKHGLLESNSVMTDST  140

Query  146  VVEGDVGYPTDTGLLAKAVG--SMARTVARIKAADAGSAPLGGSS  188
            +++ +    + T + AKA     +AR  A  K     S  +  S+
Sbjct  141  LIKANASLNSLTPIEAKAAAYEKVARKAAINKLGPPASRSISNST  185


>gi|189502518|ref|YP_001958235.1| hypothetical protein Aasi_1172 [Candidatus Amoebophilus asiaticus 
5a2]
 gi|189497959|gb|ACE06506.1| hypothetical protein Aasi_1172 [Candidatus Amoebophilus asiaticus 
5a2]
Length=462

 Score = 70.9 bits (172),  Expect = 1e-10, Method: Compositional matrix adjust.
 Identities = 43/165 (27%), Positives = 80/165 (49%), Gaps = 3/165 (1%)

Query  27   LARVDALLDDSAFFCPFVPFFDPRMGRPSIPMETYLRLMFLKFRYRLGYES-LCREVTDS  85
            L++V+  +D S      +  ++ + GRPSI  E + R++ + + Y +  +  +C+E+  +
Sbjct  21   LSKVNKYIDLSFTHQLVIASYNSKHGRPSIDPEIFFRMLMISYFYNINSDRRVCQEIRYN  80

Query  86   ITWRRFCRIPLEGSVPHPTTLMKLTTRCGEDAVAGLNEALLAKAASEKLLRTNKVRADTT  145
            + +R FC++ LE  VP  + L +   R GE     L   +L       LL +N V  D+T
Sbjct  81   VAYRWFCKLGLEDKVPDHSYLSRTRNRFGEKVFEALFTTILNLCRKHGLLESNSVMTDST  140

Query  146  VVEGDVGYPTDTGLLAKAVG--SMARTVARIKAADAGSAPLGGSS  188
            +++ +    + T + AKA     +AR  A  K     S  +  S+
Sbjct  141  LIKANASLNSLTPIEAKAAAYEKVARKAAINKLGPPASRSISNST  185


>gi|13475201|ref|NP_106765.1| transposase [Mesorhizobium loti MAFF303099]
 gi|14025952|dbj|BAB52551.1| transposase [Mesorhizobium loti MAFF303099]
Length=182

 Score = 68.6 bits (166),  Expect = 7e-10, Method: Compositional matrix adjust.
 Identities = 50/134 (38%), Positives = 66/134 (50%), Gaps = 5/134 (3%)

Query  52   GRPSIPMETYLRLMFLKFRYRLGYESLCREVTDSITWRRFCRIPLEGSVPHPTTLMKLTT  111
            GR  +P E  LR   LK   +L Y+ L   + DS ++R F R+P  G  P  + L K  +
Sbjct  28   GREGLPAEAVLRCALLKQHRQLSYQELAFHLEDSASFRAFARLPW-GWSPKKSVLHKTIS  86

Query  112  RCGEDAVAGLNEALLAKAASEKLLRTNKVRADTTVVEGDVGYPTDTGLLAKAVGSMARTV  171
                     +N+ LLA A  EKL     VR D+TV    V  P+D+ LL  AV  M R  
Sbjct  87   AIRAPTWEEINKVLLASARREKLESGKVVRVDSTVTAALVHEPSDSSLLWDAVRVMVRL-  145

Query  172  ARIKAADA-GSAPL  184
              ++ ADA GSA L
Sbjct  146  --LQHADALGSAIL  157


>gi|167968536|ref|ZP_02550813.1| transposase [Mycobacterium tuberculosis H37Ra]
 gi|297730549|ref|ZP_06959667.1| transposase [Mycobacterium tuberculosis KZN R506]
 gi|313657878|ref|ZP_07814758.1| transposase [Mycobacterium tuberculosis KZN V2475]
Length=221

 Score = 68.6 bits (166),  Expect = 7e-10, Method: Compositional matrix adjust.
 Identities = 48/71 (68%), Positives = 55/71 (78%), Gaps = 0/71 (0%)

Query  107  MKLTTRCGEDAVAGLNEALLAKAASEKLLRTNKVRADTTVVEGDVGYPTDTGLLAKAVGS  166
            MKLTTRCG  A+ GLNEALLAKAA  KLL TN++RADTTV   +V YPTD GLLAKA+  
Sbjct  1    MKLTTRCGSAAIDGLNEALLAKAAEAKLLGTNRIRADTTVARANVSYPTDLGLLAKAMRR  60

Query  167  MARTVARIKAA  177
            +A T  RI+AA
Sbjct  61   IAATGKRIQAA  71


>gi|20804074|emb|CAD31277.1| PUTATIVE TRANSPOSASE FOR INSERTION ELEMENT PROTEIN [Mesorhizobium 
loti R7A]
Length=444

 Score = 68.2 bits (165),  Expect = 9e-10, Method: Compositional matrix adjust.
 Identities = 52/149 (35%), Positives = 70/149 (47%), Gaps = 8/149 (5%)

Query  52   GRPSIPMETYLRLMFLKFRYRLGYESLCREVTDSITWRRFCRIPLEGSVPHPTTLMKLTT  111
            GR  +P E  LR   LK   +L Y+ L   + DS ++R F R+P  G  P  + L K  +
Sbjct  54   GREGLPAEAVLRCALLKQHRQLSYQELAFHLEDSASFRAFARLPW-GWSPKKSVLHKTIS  112

Query  112  RCGEDAVAGLNEALLAKAASEKLLRTNKVRADTTVVEGDVGYPTDTGLLAKAVGSMARTV  171
                     +N+ LLA A  EKL     VR D+TV    V  P+D+ LL  AV  M R  
Sbjct  113  AIQAPTWEEINKVLLASAGREKLEGGKVVRVDSTVTAALVHEPSDSSLLWDAVRVMVRL-  171

Query  172  ARIKAADAGSAPLGGSSGPRDRLQAAVTR  200
              ++ ADA    LG +    D  +AA  R
Sbjct  172  --LQHADA----LGSAIPWHDHCRAAKKR  194


>gi|334319413|ref|YP_004551972.1| transposase IS4 family protein [Sinorhizobium meliloti AK83]
 gi|334099840|gb|AEG57849.1| transposase IS4 family protein [Sinorhizobium meliloti AK83]
Length=444

 Score = 68.2 bits (165),  Expect = 1e-09, Method: Compositional matrix adjust.
 Identities = 43/122 (36%), Positives = 59/122 (49%), Gaps = 1/122 (0%)

Query  52   GRPSIPMETYLRLMFLKFRYRLGYESLCREVTDSITWRRFCRIPLEGSVPHPTTLMKLTT  111
            GR  +P E  LR   LK   +L YE L   + DS ++R F R+P  G  P  + L K  +
Sbjct  54   GRQGLPSEAVLRCALLKQYRQLSYEELAFHLEDSASFRAFARLPW-GWSPKKSVLHKTIS  112

Query  112  RCGEDAVAGLNEALLAKAASEKLLRTNKVRADTTVVEGDVGYPTDTGLLAKAVGSMARTV  171
                D    +N+ LLA A  EKL     VR D+TV    +  P+D+ LL   V  M R +
Sbjct  113  AIRADTWEAVNKMLLASARQEKLESGRVVRVDSTVTAALIHEPSDSSLLWDCVRVMVRLL  172

Query  172  AR  173
             +
Sbjct  173  QQ  174


>gi|16263345|ref|NP_436138.1| TRm17a transposase fragment [Sinorhizobium meliloti 1021]
 gi|14524027|gb|AAK65550.1| TRm17a transposase fragment [Sinorhizobium meliloti 1021]
Length=266

 Score = 67.8 bits (164),  Expect = 1e-09, Method: Compositional matrix adjust.
 Identities = 42/122 (35%), Positives = 59/122 (49%), Gaps = 1/122 (0%)

Query  52   GRPSIPMETYLRLMFLKFRYRLGYESLCREVTDSITWRRFCRIPLEGSVPHPTTLMKLTT  111
            GR  +P E  LR   LK   +L YE L   + DS ++R F R+P  G  P  + L K  +
Sbjct  54   GRQGLPSEAVLRCALLKQYRQLSYEELAFHLEDSASFRAFARLPW-GWSPKKSVLHKTIS  112

Query  112  RCGEDAVAGLNEALLAKAASEKLLRTNKVRADTTVVEGDVGYPTDTGLLAKAVGSMARTV  171
                D    +N+ LLA A  E+L     VR D+TV    +  P+D+ LL   V  M R +
Sbjct  113  AIRADTWEAVNKMLLASARQERLXSGRVVRVDSTVTAALIHEPSDSSLLWDCVRVMVRLL  172

Query  172  AR  173
             +
Sbjct  173  QQ  174


>gi|15966574|ref|NP_386927.1| putative partial transposase for ISRM17 protein [Sinorhizobium 
meliloti 1021]
 gi|15075845|emb|CAC47400.1| Putative partial transposase for ISRm17 protein [Sinorhizobium 
meliloti 1021]
Length=250

 Score = 67.8 bits (164),  Expect = 1e-09, Method: Compositional matrix adjust.
 Identities = 50/149 (34%), Positives = 70/149 (47%), Gaps = 8/149 (5%)

Query  52   GRPSIPMETYLRLMFLKFRYRLGYESLCREVTDSITWRRFCRIPLEGSVPHPTTLMKLTT  111
            GR  +P E  LR   LK   +L YE L   + DS ++R F R+P  G  P  + L K  +
Sbjct  54   GRQGLPSEAVLRCALLKQYRQLSYEELAFHLEDSASFRAFARLPW-GWSPKKSVLHKTIS  112

Query  112  RCGEDAVAGLNEALLAKAASEKLLRTNKVRADTTVVEGDVGYPTDTGLLAKAVGSMARTV  171
                D    +N+ LLA A  E+L     VR D+TV    +  P+D+ LL   V  M R  
Sbjct  113  AIRADTWEAVNKMLLASARQERLESGRVVRVDSTVTAALIHEPSDSSLLWDCVRVMVRL-  171

Query  172  ARIKAADAGSAPLGGSSGPRDRLQAAVTR  200
              ++ AD+    LG +    D  +AA  R
Sbjct  172  --LQQADS----LGSTIPWHDHCRAAKKR  194


>gi|16262702|ref|NP_435495.1| TRm17a transposase [Sinorhizobium meliloti 1021]
 gi|14523327|gb|AAK64907.1| TRm17a transposase [Sinorhizobium meliloti 1021]
Length=299

 Score = 67.8 bits (164),  Expect = 1e-09, Method: Compositional matrix adjust.
 Identities = 50/149 (34%), Positives = 70/149 (47%), Gaps = 8/149 (5%)

Query  52   GRPSIPMETYLRLMFLKFRYRLGYESLCREVTDSITWRRFCRIPLEGSVPHPTTLMKLTT  111
            GR  +P E  LR   LK   +L YE L   + DS ++R F R+P  G  P  + L K  +
Sbjct  54   GRQGLPSEAVLRCALLKQYRQLSYEELAFHLEDSASFRAFARLPW-GWSPKKSVLHKTIS  112

Query  112  RCGEDAVAGLNEALLAKAASEKLLRTNKVRADTTVVEGDVGYPTDTGLLAKAVGSMARTV  171
                D    +N+ LLA A  E+L     VR D+TV    +  P+D+ LL   V  M R  
Sbjct  113  AIRADTWEAVNKMLLASARQERLESGRVVRVDSTVTAALIHEPSDSSLLWDCVRVMVRL-  171

Query  172  ARIKAADAGSAPLGGSSGPRDRLQAAVTR  200
              ++ AD+    LG +    D  +AA  R
Sbjct  172  --LQQADS----LGSTIPWHDHCRAAKKR  194


>gi|15966358|ref|NP_386711.1| transposase ISRM17 [Sinorhizobium meliloti 1021]
 gi|15966866|ref|NP_387219.1| transposase [Sinorhizobium meliloti 1021]
 gi|15075629|emb|CAC47184.1| Putative transposase for ISRm17 protein [Sinorhizobium meliloti 
1021]
 gi|15076138|emb|CAC47692.1| Putative transposase for insertion sequence ISRm17 [Sinorhizobium 
meliloti 1021]
 gi|333814851|gb|AEG07519.1| transposase IS4 family protein [Sinorhizobium meliloti BL225C]
 gi|333814992|gb|AEG07660.1| transposase IS4 family protein [Sinorhizobium meliloti BL225C]
Length=444

 Score = 67.4 bits (163),  Expect = 2e-09, Method: Compositional matrix adjust.
 Identities = 50/149 (34%), Positives = 70/149 (47%), Gaps = 8/149 (5%)

Query  52   GRPSIPMETYLRLMFLKFRYRLGYESLCREVTDSITWRRFCRIPLEGSVPHPTTLMKLTT  111
            GR  +P E  LR   LK   +L YE L   + DS ++R F R+P  G  P  + L K  +
Sbjct  54   GRQGLPSEAVLRCALLKQYRQLSYEELAFHLEDSASFRAFARLPW-GWSPKKSVLHKTIS  112

Query  112  RCGEDAVAGLNEALLAKAASEKLLRTNKVRADTTVVEGDVGYPTDTGLLAKAVGSMARTV  171
                D    +N+ LLA A  E+L     VR D+TV    +  P+D+ LL   V  M R  
Sbjct  113  AIRADTWEAVNKMLLASARQERLESGRVVRVDSTVTAALIHEPSDSSLLWDCVRVMVRL-  171

Query  172  ARIKAADAGSAPLGGSSGPRDRLQAAVTR  200
              ++ AD+    LG +    D  +AA  R
Sbjct  172  --LQQADS----LGSTIPWHDHCRAAKKR  194



Lambda     K      H
   0.321    0.136    0.409 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 313223274342


  Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
    Posted date:  Sep 5, 2011  4:36 AM
  Number of letters in database: 5,219,829,388
  Number of sequences in database:  15,229,318



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40