BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv3388
Length=731
Score E
Sequences producing significant alignments: (Bits) Value
gi|57117101|ref|YP_177968.1| PE-PGRS family protein [Mycobacteri... 1181 0.0
gi|148824595|ref|YP_001289349.1| PE-PGRS family protein [Mycobac... 1178 0.0
gi|15842981|ref|NP_338018.1| PE_PGRS family protein [Mycobacteri... 1172 0.0
gi|339296212|gb|AEJ48323.1| hypothetical protein CCDC5079_3134 [... 1170 0.0
gi|148663252|ref|YP_001284775.1| PE-PGRS family protein [Mycobac... 273 8e-71
gi|339633393|ref|YP_004725035.1| PE-PGRS family protein [Mycobac... 262 2e-67
gi|289444956|ref|ZP_06434700.1| predicted protein [Mycobacterium... 260 5e-67
gi|31794568|ref|NP_857061.1| PE-PGRS family protein [Mycobacteri... 256 8e-66
gi|341603337|emb|CCC66018.1| PE-PGRS family protein [Mycobacteri... 256 1e-65
gi|121639312|ref|YP_979536.1| PE-PGRS family protein [Mycobacter... 256 1e-65
gi|183985289|ref|YP_001853580.1| PE-PGRS family protein [Mycobac... 141 5e-31
gi|340627504|ref|YP_004745956.1| PE-PGRS family protein [Mycobac... 141 5e-31
gi|15842017|ref|NP_337054.1| PE_PGRS family protein [Mycobacteri... 140 6e-31
gi|339632516|ref|YP_004724158.1| PE-PGRS family protein [Mycobac... 140 6e-31
gi|57116996|ref|YP_177887.1| PE-PGRS family protein [Mycobacteri... 140 7e-31
gi|344220317|gb|AEN00948.1| PE-PGRS family protein [Mycobacteriu... 140 7e-31
gi|289553720|ref|ZP_06442930.1| LOW QUALITY PROTEIN: predicted p... 140 8e-31
gi|253798432|ref|YP_003031433.1| hypothetical protein TBMG_04024... 139 1e-30
gi|183980964|ref|YP_001849255.1| PE-PGRS family protein [Mycobac... 136 2e-29
gi|339631131|ref|YP_004722773.1| PE-PGRS family protein [Mycobac... 134 5e-29
gi|183981230|ref|YP_001849521.1| PE-PGRS family protein [Mycobac... 133 1e-28
gi|183981229|ref|YP_001849520.1| PE-PGRS family protein [Mycobac... 132 2e-28
gi|339298994|gb|AEJ51104.1| PE-PGRS family protein [Mycobacteriu... 132 2e-28
gi|183985012|ref|YP_001853303.1| PE-PGRS family protein [Mycobac... 130 7e-28
gi|183983306|ref|YP_001851597.1| PE-PGRS family protein [Mycobac... 130 8e-28
gi|121636496|ref|YP_976719.1| PE-PGRS family protein [Mycobacter... 130 1e-27
gi|183985312|ref|YP_001853603.1| PE-PGRS family protein [Mycobac... 126 1e-26
gi|183983104|ref|YP_001851395.1| PE-PGRS family protein [Mycobac... 125 2e-26
gi|183982116|ref|YP_001850407.1| PE-PGRS family protein [Mycobac... 124 8e-26
gi|183980462|ref|YP_001848753.1| PE-PGRS family protein [Mycobac... 122 3e-25
gi|183982664|ref|YP_001850955.1| PE-PGRS family protein, PE_PGRS... 120 1e-24
gi|339294426|gb|AEJ46537.1| putative PE family protein [Mycobact... 118 4e-24
gi|183980779|ref|YP_001849070.1| PE-PGRS family protein [Mycobac... 118 4e-24
gi|183981221|ref|YP_001849512.1| PE-PGRS family protein [Mycobac... 118 4e-24
gi|183981460|ref|YP_001849751.1| PE-PGRS family protein [Mycobac... 117 5e-24
gi|339631519|ref|YP_004723161.1| PE-PGRS family protein [Mycobac... 117 6e-24
gi|339633513|ref|YP_004725155.1| PE-PGRS family protein [Mycobac... 117 9e-24
gi|341603451|emb|CCC66132.1| PE-PGRS family protein [Mycobacteri... 117 9e-24
gi|224991926|ref|YP_002646615.1| PE-PGRS family protein [Mycobac... 117 9e-24
gi|339298064|gb|AEJ50174.1| putative PE family protein [Mycobact... 116 1e-23
gi|253800553|ref|YP_003033554.1| hypothetical protein TBMG_04114... 116 1e-23
gi|344221345|gb|AEN01976.1| PE-PGRS family protein [Mycobacteriu... 116 1e-23
gi|339299931|gb|AEJ52041.1| PE-PGRS family protein [Mycobacteriu... 116 2e-23
gi|31794687|ref|NP_857180.1| PE-PGRS family protein [Mycobacteri... 116 2e-23
gi|121639430|ref|YP_979654.1| PE-PGRS family protein [Mycobacter... 116 2e-23
gi|121637380|ref|YP_977603.1| PE-PGRS family protein [Mycobacter... 116 2e-23
gi|339631517|ref|YP_004723159.1| PE-PGRS family protein [Mycobac... 115 2e-23
gi|148824718|ref|YP_001289472.1| PE-PGRS family protein [Mycobac... 115 3e-23
gi|31792644|ref|NP_855137.1| PE-PGRS family protein [Mycobacteri... 115 3e-23
gi|340626466|ref|YP_004744918.1| PE-PGRS family protein [Mycobac... 115 4e-23
>gi|57117101|ref|YP_177968.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Rv]
gi|253800434|ref|YP_003033435.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 1435]
gi|7441235|pir||C70974 hypothetical glycine-rich protein Rv3388 - Mycobacterium tuberculosis
(strain H37RV)
gi|38490366|emb|CAE55593.1| PE-PGRS FAMILY PROTEIN [Mycobacterium tuberculosis H37Rv]
gi|253321937|gb|ACT26540.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 1435]
gi|328460166|gb|AEB05589.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 4207]
gi|344221227|gb|AEN01858.1| PE-PGRS family protein [Mycobacterium tuberculosis CTRI-2]
Length=731
Score = 1181 bits (3054), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 731/731 (100%), Positives = 731/731 (100%), Gaps = 0/731 (0%)
Query 1 MSFVIANPEMLAAAATDLAGIRSAISAATAAAAAPTIQVAAAGADEVSLAISALFGQHAQ 60
MSFVIANPEMLAAAATDLAGIRSAISAATAAAAAPTIQVAAAGADEVSLAISALFGQHAQ
Sbjct 1 MSFVIANPEMLAAAATDLAGIRSAISAATAAAAAPTIQVAAAGADEVSLAISALFGQHAQ 60
Query 61 AYQALSAQATIFHDQFVQALTSGGNLYAAAESHTVEQMVLNAINAPTQTLFGRPLIGDGA 120
AYQALSAQATIFHDQFVQALTSGGNLYAAAESHTVEQMVLNAINAPTQTLFGRPLIGDGA
Sbjct 61 AYQALSAQATIFHDQFVQALTSGGNLYAAAESHTVEQMVLNAINAPTQTLFGRPLIGDGA 120
Query 121 NGTAENPDGQNGGLLFGNGGNGFTQTTAGVAGGNGGSAGLIGNGGAGGGGGAGAAGGLGG 180
NGTAENPDGQNGGLLFGNGGNGFTQTTAGVAGGNGGSAGLIGNGGAGGGGGAGAAGGLGG
Sbjct 121 NGTAENPDGQNGGLLFGNGGNGFTQTTAGVAGGNGGSAGLIGNGGAGGGGGAGAAGGLGG 180
Query 181 NGGWLYGNGGAGGIGGAGTGTGGHGGAGGAGGRAWLWGTGGAGGAGGDGGWLFGDGGAGG 240
NGGWLYGNGGAGGIGGAGTGTGGHGGAGGAGGRAWLWGTGGAGGAGGDGGWLFGDGGAGG
Sbjct 181 NGGWLYGNGGAGGIGGAGTGTGGHGGAGGAGGRAWLWGTGGAGGAGGDGGWLFGDGGAGG 240
Query 241 TGGNGGSGFNSLTSSVGGAGGAGGHAGLFGAGGTGGTGGIGGQNTETGPAASNGGAGGAG 300
TGGNGGSGFNSLTSSVGGAGGAGGHAGLFGAGGTGGTGGIGGQNTETGPAASNGGAGGAG
Sbjct 241 TGGNGGSGFNSLTSSVGGAGGAGGHAGLFGAGGTGGTGGIGGQNTETGPAASNGGAGGAG 300
Query 301 GGGGYLVGDGGAGGTGGAGGKNSSGGATLTGGTGGTGGAGGAAGWLYGSGGAGGAGGAGG 360
GGGGYLVGDGGAGGTGGAGGKNSSGGATLTGGTGGTGGAGGAAGWLYGSGGAGGAGGAGG
Sbjct 301 GGGGYLVGDGGAGGTGGAGGKNSSGGATLTGGTGGTGGAGGAAGWLYGSGGAGGAGGAGG 360
Query 361 LNNAGGATGGTGGTGGAGGSGAWLYGNGGAAGAGGNGGNNTSAGTGGVGASGGTGGNAGL 420
LNNAGGATGGTGGTGGAGGSGAWLYGNGGAAGAGGNGGNNTSAGTGGVGASGGTGGNAGL
Sbjct 361 LNNAGGATGGTGGTGGAGGSGAWLYGNGGAAGAGGNGGNNTSAGTGGVGASGGTGGNAGL 420
Query 421 IGAGGHGGAGGAGGNQTGGVGNGGAGGNGGAGGAGGQLYGNGGDGGNGGAGGANIAGGNG 480
IGAGGHGGAGGAGGNQTGGVGNGGAGGNGGAGGAGGQLYGNGGDGGNGGAGGANIAGGNG
Sbjct 421 IGAGGHGGAGGAGGNQTGGVGNGGAGGNGGAGGAGGQLYGNGGDGGNGGAGGANIAGGNG 480
Query 481 SDGGAAGHGGAGGSARLIGAGGHGGDGGAGGNTAGRRADAIAGTGGDGGNGGNGGLLSGN 540
SDGGAAGHGGAGGSARLIGAGGHGGDGGAGGNTAGRRADAIAGTGGDGGNGGNGGLLSGN
Sbjct 481 SDGGAAGHGGAGGSARLIGAGGHGGDGGAGGNTAGRRADAIAGTGGDGGNGGNGGLLSGN 540
Query 541 AGAGGHGGAGGSSTATTTTGTPPTGATGGNGGNGGAGGTAGFTGSGGIGGNGGAGGTGGN 600
AGAGGHGGAGGSSTATTTTGTPPTGATGGNGGNGGAGGTAGFTGSGGIGGNGGAGGTGGN
Sbjct 541 AGAGGHGGAGGSSTATTTTGTPPTGATGGNGGNGGAGGTAGFTGSGGIGGNGGAGGTGGN 600
Query 601 AGVALSVGSTGGLGGNGGSGGLGGGGGSLFGNGGAGGVGATGGNGGSGIGPASVGGNGGK 660
AGVALSVGSTGGLGGNGGSGGLGGGGGSLFGNGGAGGVGATGGNGGSGIGPASVGGNGGK
Sbjct 601 AGVALSVGSTGGLGGNGGSGGLGGGGGSLFGNGGAGGVGATGGNGGSGIGPASVGGNGGK 660
Query 661 GGVGAAGGLAGQIGNGGSGGSGGAGGNGGTGDTAGNGGNGGAGAVGGNAQLIGNGGNGGG 720
GGVGAAGGLAGQIGNGGSGGSGGAGGNGGTGDTAGNGGNGGAGAVGGNAQLIGNGGNGGG
Sbjct 661 GGVGAAGGLAGQIGNGGSGGSGGAGGNGGTGDTAGNGGNGGAGAVGGNAQLIGNGGNGGG 720
Query 721 GGNGGTGADGT 731
GGNGGTGADGT
Sbjct 721 GGNGGTGADGT 731
>gi|148824595|ref|YP_001289349.1| PE-PGRS family protein [Mycobacterium tuberculosis F11]
gi|148723122|gb|ABR07747.1| PE-PGRS family protein [Mycobacterium tuberculosis F11]
Length=731
Score = 1178 bits (3047), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 730/731 (99%), Positives = 730/731 (99%), Gaps = 0/731 (0%)
Query 1 MSFVIANPEMLAAAATDLAGIRSAISAATAAAAAPTIQVAAAGADEVSLAISALFGQHAQ 60
MSFVIANPEMLAAAATDLAGIRSAISAATAAAAAPTIQVAAAGADEVSLAISALFGQHAQ
Sbjct 1 MSFVIANPEMLAAAATDLAGIRSAISAATAAAAAPTIQVAAAGADEVSLAISALFGQHAQ 60
Query 61 AYQALSAQATIFHDQFVQALTSGGNLYAAAESHTVEQMVLNAINAPTQTLFGRPLIGDGA 120
AYQALSAQATIFHDQFVQALTSGGNLYAAAESHTVEQMVLNAINAPTQTLFGRPLIGDGA
Sbjct 61 AYQALSAQATIFHDQFVQALTSGGNLYAAAESHTVEQMVLNAINAPTQTLFGRPLIGDGA 120
Query 121 NGTAENPDGQNGGLLFGNGGNGFTQTTAGVAGGNGGSAGLIGNGGAGGGGGAGAAGGLGG 180
NGTAENPDGQNGGLLFGNGGNGFTQTTAGVAGGNGGSAGLIGNGGAGGGGGAGAAGGLGG
Sbjct 121 NGTAENPDGQNGGLLFGNGGNGFTQTTAGVAGGNGGSAGLIGNGGAGGGGGAGAAGGLGG 180
Query 181 NGGWLYGNGGAGGIGGAGTGTGGHGGAGGAGGRAWLWGTGGAGGAGGDGGWLFGDGGAGG 240
NGGWLYGNGGAGGIGGAGTGTGGHGGAGGAGGRAWLWGTGGAGGAGGDGGWLFGDGGAGG
Sbjct 181 NGGWLYGNGGAGGIGGAGTGTGGHGGAGGAGGRAWLWGTGGAGGAGGDGGWLFGDGGAGG 240
Query 241 TGGNGGSGFNSLTSSVGGAGGAGGHAGLFGAGGTGGTGGIGGQNTETGPAASNGGAGGAG 300
TGGNGGSGFNSLTSSVGGAGGAGGHAGLFGAGGTGGTGGIGGQNTETGPAASNGGAGGAG
Sbjct 241 TGGNGGSGFNSLTSSVGGAGGAGGHAGLFGAGGTGGTGGIGGQNTETGPAASNGGAGGAG 300
Query 301 GGGGYLVGDGGAGGTGGAGGKNSSGGATLTGGTGGTGGAGGAAGWLYGSGGAGGAGGAGG 360
GGGGYLVGDGGAGGTGGAGGKNSSGGATLTGGTGGTGGAGGAAGWLYGSGGAGGAGGAGG
Sbjct 301 GGGGYLVGDGGAGGTGGAGGKNSSGGATLTGGTGGTGGAGGAAGWLYGSGGAGGAGGAGG 360
Query 361 LNNAGGATGGTGGTGGAGGSGAWLYGNGGAAGAGGNGGNNTSAGTGGVGASGGTGGNAGL 420
LNNAGGATGGTGGTGGAGGSGAWLYGNGGAAGAGGNGGNNTSAGTGGV ASGGTGGNAGL
Sbjct 361 LNNAGGATGGTGGTGGAGGSGAWLYGNGGAAGAGGNGGNNTSAGTGGVEASGGTGGNAGL 420
Query 421 IGAGGHGGAGGAGGNQTGGVGNGGAGGNGGAGGAGGQLYGNGGDGGNGGAGGANIAGGNG 480
IGAGGHGGAGGAGGNQTGGVGNGGAGGNGGAGGAGGQLYGNGGDGGNGGAGGANIAGGNG
Sbjct 421 IGAGGHGGAGGAGGNQTGGVGNGGAGGNGGAGGAGGQLYGNGGDGGNGGAGGANIAGGNG 480
Query 481 SDGGAAGHGGAGGSARLIGAGGHGGDGGAGGNTAGRRADAIAGTGGDGGNGGNGGLLSGN 540
SDGGAAGHGGAGGSARLIGAGGHGGDGGAGGNTAGRRADAIAGTGGDGGNGGNGGLLSGN
Sbjct 481 SDGGAAGHGGAGGSARLIGAGGHGGDGGAGGNTAGRRADAIAGTGGDGGNGGNGGLLSGN 540
Query 541 AGAGGHGGAGGSSTATTTTGTPPTGATGGNGGNGGAGGTAGFTGSGGIGGNGGAGGTGGN 600
AGAGGHGGAGGSSTATTTTGTPPTGATGGNGGNGGAGGTAGFTGSGGIGGNGGAGGTGGN
Sbjct 541 AGAGGHGGAGGSSTATTTTGTPPTGATGGNGGNGGAGGTAGFTGSGGIGGNGGAGGTGGN 600
Query 601 AGVALSVGSTGGLGGNGGSGGLGGGGGSLFGNGGAGGVGATGGNGGSGIGPASVGGNGGK 660
AGVALSVGSTGGLGGNGGSGGLGGGGGSLFGNGGAGGVGATGGNGGSGIGPASVGGNGGK
Sbjct 601 AGVALSVGSTGGLGGNGGSGGLGGGGGSLFGNGGAGGVGATGGNGGSGIGPASVGGNGGK 660
Query 661 GGVGAAGGLAGQIGNGGSGGSGGAGGNGGTGDTAGNGGNGGAGAVGGNAQLIGNGGNGGG 720
GGVGAAGGLAGQIGNGGSGGSGGAGGNGGTGDTAGNGGNGGAGAVGGNAQLIGNGGNGGG
Sbjct 661 GGVGAAGGLAGQIGNGGSGGSGGAGGNGGTGDTAGNGGNGGAGAVGGNAQLIGNGGNGGG 720
Query 721 GGNGGTGADGT 731
GGNGGTGADGT
Sbjct 721 GGNGGTGADGT 731
>gi|15842981|ref|NP_338018.1| PE_PGRS family protein [Mycobacterium tuberculosis CDC1551]
gi|13883320|gb|AAK47832.1| PE_PGRS family protein [Mycobacterium tuberculosis CDC1551]
Length=775
Score = 1172 bits (3032), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 729/731 (99%), Positives = 729/731 (99%), Gaps = 0/731 (0%)
Query 1 MSFVIANPEMLAAAATDLAGIRSAISAATAAAAAPTIQVAAAGADEVSLAISALFGQHAQ 60
MSFVIANPEMLAAAATDLAGIRSAISAATAAAAAPTIQVAAAGADEVSLAISALFGQHAQ
Sbjct 45 MSFVIANPEMLAAAATDLAGIRSAISAATAAAAAPTIQVAAAGADEVSLAISALFGQHAQ 104
Query 61 AYQALSAQATIFHDQFVQALTSGGNLYAAAESHTVEQMVLNAINAPTQTLFGRPLIGDGA 120
AYQALSAQATIFHDQFVQALTSGGNLYAAAESHTVEQMVLNAINAPTQTLFGRPLIGDGA
Sbjct 105 AYQALSAQATIFHDQFVQALTSGGNLYAAAESHTVEQMVLNAINAPTQTLFGRPLIGDGA 164
Query 121 NGTAENPDGQNGGLLFGNGGNGFTQTTAGVAGGNGGSAGLIGNGGAGGGGGAGAAGGLGG 180
NGTAENPDGQNGGLLFGNGGNGFTQTTAGVAGGNGGSAGLIGNGGAGGGGGAGAAGGLGG
Sbjct 165 NGTAENPDGQNGGLLFGNGGNGFTQTTAGVAGGNGGSAGLIGNGGAGGGGGAGAAGGLGG 224
Query 181 NGGWLYGNGGAGGIGGAGTGTGGHGGAGGAGGRAWLWGTGGAGGAGGDGGWLFGDGGAGG 240
NGGWLYGNGGAGGIGGAGTGTGGHGGAGGAGGRAWLWGTGGAGGAGGDGGWLFGDGGAGG
Sbjct 225 NGGWLYGNGGAGGIGGAGTGTGGHGGAGGAGGRAWLWGTGGAGGAGGDGGWLFGDGGAGG 284
Query 241 TGGNGGSGFNSLTSSVGGAGGAGGHAGLFGAGGTGGTGGIGGQNTETGPAASNGGAGGAG 300
TGGNGGSGFNSLTSSVGGAGGAGGHAGLFGAGGTGGTGGIGGQNTETGPAASNGGAGGAG
Sbjct 285 TGGNGGSGFNSLTSSVGGAGGAGGHAGLFGAGGTGGTGGIGGQNTETGPAASNGGAGGAG 344
Query 301 GGGGYLVGDGGAGGTGGAGGKNSSGGATLTGGTGGTGGAGGAAGWLYGSGGAGGAGGAGG 360
GGGGYLVGDGGAGGTGGAGGKNSSGGATLTGGTGGT GAGGAAGWLYGSGGAGGAGGAGG
Sbjct 345 GGGGYLVGDGGAGGTGGAGGKNSSGGATLTGGTGGTXGAGGAAGWLYGSGGAGGAGGAGG 404
Query 361 LNNAGGATGGTGGTGGAGGSGAWLYGNGGAAGAGGNGGNNTSAGTGGVGASGGTGGNAGL 420
LNNAGGATGGTGGTGGAGGSGAWLYGNGGAAGAGGNGGNNTSAGTGGVGASGGTGGNAGL
Sbjct 405 LNNAGGATGGTGGTGGAGGSGAWLYGNGGAAGAGGNGGNNTSAGTGGVGASGGTGGNAGL 464
Query 421 IGAGGHGGAGGAGGNQTGGVGNGGAGGNGGAGGAGGQLYGNGGDGGNGGAGGANIAGGNG 480
IGAGGHGGAGGAGGNQTGGVGNGGAGGNGGAGGAGGQLYGNGGDGGNGGAGGANIAGGNG
Sbjct 465 IGAGGHGGAGGAGGNQTGGVGNGGAGGNGGAGGAGGQLYGNGGDGGNGGAGGANIAGGNG 524
Query 481 SDGGAAGHGGAGGSARLIGAGGHGGDGGAGGNTAGRRADAIAGTGGDGGNGGNGGLLSGN 540
SDGGAAGHGGAGGSARLIGAGG GGDGGAGGNTAGRRADAIAGTGGDGGNGGNGGLLSGN
Sbjct 525 SDGGAAGHGGAGGSARLIGAGGRGGDGGAGGNTAGRRADAIAGTGGDGGNGGNGGLLSGN 584
Query 541 AGAGGHGGAGGSSTATTTTGTPPTGATGGNGGNGGAGGTAGFTGSGGIGGNGGAGGTGGN 600
AGAGGHGGAGGSSTATTTTGTPPTGATGGNGGNGGAGGTAGFTGSGGIGGNGGAGGTGGN
Sbjct 585 AGAGGHGGAGGSSTATTTTGTPPTGATGGNGGNGGAGGTAGFTGSGGIGGNGGAGGTGGN 644
Query 601 AGVALSVGSTGGLGGNGGSGGLGGGGGSLFGNGGAGGVGATGGNGGSGIGPASVGGNGGK 660
AGVALSVGSTGGLGGNGGSGGLGGGGGSLFGNGGAGGVGATGGNGGSGIGPASVGGNGGK
Sbjct 645 AGVALSVGSTGGLGGNGGSGGLGGGGGSLFGNGGAGGVGATGGNGGSGIGPASVGGNGGK 704
Query 661 GGVGAAGGLAGQIGNGGSGGSGGAGGNGGTGDTAGNGGNGGAGAVGGNAQLIGNGGNGGG 720
GGVGAAGGLAGQIGNGGSGGSGGAGGNGGTGDTAGNGGNGGAGAVGGNAQLIGNGGNGGG
Sbjct 705 GGVGAAGGLAGQIGNGGSGGSGGAGGNGGTGDTAGNGGNGGAGAVGGNAQLIGNGGNGGG 764
Query 721 GGNGGTGADGT 731
GGNGGTGADGT
Sbjct 765 GGNGGTGADGT 775
>gi|339296212|gb|AEJ48323.1| hypothetical protein CCDC5079_3134 [Mycobacterium tuberculosis
CCDC5079]
Length=731
Score = 1170 bits (3026), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 728/731 (99%), Positives = 728/731 (99%), Gaps = 0/731 (0%)
Query 1 MSFVIANPEMLAAAATDLAGIRSAISAATAAAAAPTIQVAAAGADEVSLAISALFGQHAQ 60
MSFVIANPEMLAAAATDLAGIRSAISAATAAAAAPTIQVAAAGADEVSLAISALFGQHAQ
Sbjct 1 MSFVIANPEMLAAAATDLAGIRSAISAATAAAAAPTIQVAAAGADEVSLAISALFGQHAQ 60
Query 61 AYQALSAQATIFHDQFVQALTSGGNLYAAAESHTVEQMVLNAINAPTQTLFGRPLIGDGA 120
AYQALSAQATIFHDQFVQALTSGGNLYAAAESHTVEQMVLNAINAPTQTLFGRPLIGDGA
Sbjct 61 AYQALSAQATIFHDQFVQALTSGGNLYAAAESHTVEQMVLNAINAPTQTLFGRPLIGDGA 120
Query 121 NGTAENPDGQNGGLLFGNGGNGFTQTTAGVAGGNGGSAGLIGNGGAGGGGGAGAAGGLGG 180
NGTAENPDGQNGGLLFGNGGNGFTQTTAGVAGGNGGSAGLIGNGGAGGGGGAGAAGG GG
Sbjct 121 NGTAENPDGQNGGLLFGNGGNGFTQTTAGVAGGNGGSAGLIGNGGAGGGGGAGAAGGSGG 180
Query 181 NGGWLYGNGGAGGIGGAGTGTGGHGGAGGAGGRAWLWGTGGAGGAGGDGGWLFGDGGAGG 240
NGGWLYGNGGAGGIGGAGTGTGGHGGAGGAGGRA LWG GGAGGAGGDGGWLFGDGGAGG
Sbjct 181 NGGWLYGNGGAGGIGGAGTGTGGHGGAGGAGGRAGLWGNGGAGGAGGDGGWLFGDGGAGG 240
Query 241 TGGNGGSGFNSLTSSVGGAGGAGGHAGLFGAGGTGGTGGIGGQNTETGPAASNGGAGGAG 300
TGGNGGSGFNSLTSSVGGAGGAGGHAGLFGAGGTGGTGGIGGQNTETGPAASNGGAGGAG
Sbjct 241 TGGNGGSGFNSLTSSVGGAGGAGGHAGLFGAGGTGGTGGIGGQNTETGPAASNGGAGGAG 300
Query 301 GGGGYLVGDGGAGGTGGAGGKNSSGGATLTGGTGGTGGAGGAAGWLYGSGGAGGAGGAGG 360
GGGGYLVGDGGAGGTGGAGGKNSSGGATLTGGTGGTGGAGGAAGWLYGSGGAGGAGGAGG
Sbjct 301 GGGGYLVGDGGAGGTGGAGGKNSSGGATLTGGTGGTGGAGGAAGWLYGSGGAGGAGGAGG 360
Query 361 LNNAGGATGGTGGTGGAGGSGAWLYGNGGAAGAGGNGGNNTSAGTGGVGASGGTGGNAGL 420
LNNAGGATGGTGGTGGAGGSGAWLYGNGGAAGAGGNGGNNTSAGTGGVGASGGTGGNAGL
Sbjct 361 LNNAGGATGGTGGTGGAGGSGAWLYGNGGAAGAGGNGGNNTSAGTGGVGASGGTGGNAGL 420
Query 421 IGAGGHGGAGGAGGNQTGGVGNGGAGGNGGAGGAGGQLYGNGGDGGNGGAGGANIAGGNG 480
IGAGGHGGAGGAGGNQTGGVGNGGAGGNGGAGGAGGQLYGNGGDGGNGGAGGANIAGGNG
Sbjct 421 IGAGGHGGAGGAGGNQTGGVGNGGAGGNGGAGGAGGQLYGNGGDGGNGGAGGANIAGGNG 480
Query 481 SDGGAAGHGGAGGSARLIGAGGHGGDGGAGGNTAGRRADAIAGTGGDGGNGGNGGLLSGN 540
SDGGAAGHGGAGGSARLIGAGGHGGDGGAGGNTAGRRADAIAGTGGDGGNGGNGGLLSGN
Sbjct 481 SDGGAAGHGGAGGSARLIGAGGHGGDGGAGGNTAGRRADAIAGTGGDGGNGGNGGLLSGN 540
Query 541 AGAGGHGGAGGSSTATTTTGTPPTGATGGNGGNGGAGGTAGFTGSGGIGGNGGAGGTGGN 600
AGAGGHGGAGGSSTATTTTGTPPTGATGGNGGNGGAGGTAGFTGSGGIGGNGGAGGTGGN
Sbjct 541 AGAGGHGGAGGSSTATTTTGTPPTGATGGNGGNGGAGGTAGFTGSGGIGGNGGAGGTGGN 600
Query 601 AGVALSVGSTGGLGGNGGSGGLGGGGGSLFGNGGAGGVGATGGNGGSGIGPASVGGNGGK 660
AGVALSVGSTGGLGGNGGSGGLGGGGGSLFGNGGAGGVGATGGNGGSGIGPASVGGNGGK
Sbjct 601 AGVALSVGSTGGLGGNGGSGGLGGGGGSLFGNGGAGGVGATGGNGGSGIGPASVGGNGGK 660
Query 661 GGVGAAGGLAGQIGNGGSGGSGGAGGNGGTGDTAGNGGNGGAGAVGGNAQLIGNGGNGGG 720
GGVGAAGGLAGQIGNGGSGGSGGAGGNGGTGDTAGNGGNGGAGAVGGNAQLIGNGGNGGG
Sbjct 661 GGVGAAGGLAGQIGNGGSGGSGGAGGNGGTGDTAGNGGNGGAGAVGGNAQLIGNGGNGGG 720
Query 721 GGNGGTGADGT 731
GGNGGTGADGT
Sbjct 721 GGNGGTGADGT 731
>gi|148663252|ref|YP_001284775.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra]
gi|148507404|gb|ABQ75213.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra]
Length=582
Score = 273 bits (698), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 385/385 (100%), Positives = 385/385 (100%), Gaps = 0/385 (0%)
Query 1 MSFVIANPEMLAAAATDLAGIRSAISAATAAAAAPTIQVAAAGADEVSLAISALFGQHAQ 60
MSFVIANPEMLAAAATDLAGIRSAISAATAAAAAPTIQVAAAGADEVSLAISALFGQHAQ
Sbjct 1 MSFVIANPEMLAAAATDLAGIRSAISAATAAAAAPTIQVAAAGADEVSLAISALFGQHAQ 60
Query 61 AYQALSAQATIFHDQFVQALTSGGNLYAAAESHTVEQMVLNAINAPTQTLFGRPLIGDGA 120
AYQALSAQATIFHDQFVQALTSGGNLYAAAESHTVEQMVLNAINAPTQTLFGRPLIGDGA
Sbjct 61 AYQALSAQATIFHDQFVQALTSGGNLYAAAESHTVEQMVLNAINAPTQTLFGRPLIGDGA 120
Query 121 NGTAENPDGQNGGLLFGNGGNGFTQTTAGVAGGNGGSAGLIGNGGAGGGGGAGAAGGLGG 180
NGTAENPDGQNGGLLFGNGGNGFTQTTAGVAGGNGGSAGLIGNGGAGGGGGAGAAGGLGG
Sbjct 121 NGTAENPDGQNGGLLFGNGGNGFTQTTAGVAGGNGGSAGLIGNGGAGGGGGAGAAGGLGG 180
Query 181 NGGWLYGNGGAGGIGGAGTGTGGHGGAGGAGGRAWLWGTGGAGGAGGDGGWLFGDGGAGG 240
NGGWLYGNGGAGGIGGAGTGTGGHGGAGGAGGRAWLWGTGGAGGAGGDGGWLFGDGGAGG
Sbjct 181 NGGWLYGNGGAGGIGGAGTGTGGHGGAGGAGGRAWLWGTGGAGGAGGDGGWLFGDGGAGG 240
Query 241 TGGNGGSGFNSLTSSVGGAGGAGGHAGLFGAGGTGGTGGIGGQNTETGPAASNGGAGGAG 300
TGGNGGSGFNSLTSSVGGAGGAGGHAGLFGAGGTGGTGGIGGQNTETGPAASNGGAGGAG
Sbjct 241 TGGNGGSGFNSLTSSVGGAGGAGGHAGLFGAGGTGGTGGIGGQNTETGPAASNGGAGGAG 300
Query 301 GGGGYLVGDGGAGGTGGAGGKNSSGGATLTGGTGGTGGAGGAAGWLYGSGGAGGAGGAGG 360
GGGGYLVGDGGAGGTGGAGGKNSSGGATLTGGTGGTGGAGGAAGWLYGSGGAGGAGGAGG
Sbjct 301 GGGGYLVGDGGAGGTGGAGGKNSSGGATLTGGTGGTGGAGGAAGWLYGSGGAGGAGGAGG 360
Query 361 LNNAGGATGGTGGTGGAGGSGAWLY 385
LNNAGGATGGTGGTGGAGGSGAWLY
Sbjct 361 LNNAGGATGGTGGTGGAGGSGAWLY 385
>gi|339633393|ref|YP_004725035.1| PE-PGRS family protein [Mycobacterium africanum GM041182]
gi|339332749|emb|CCC28470.1| PE-PGRS family protein [Mycobacterium africanum GM041182]
Length=724
Score = 262 bits (669), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 352/406 (87%), Positives = 352/406 (87%), Gaps = 46/406 (11%)
Query 1 MSFVIANPEMLAAAATDLAGIRSAISAATAAAAAPTIQVAAAGADEVSLAISALFGQHAQ 60
MSFVIANPEMLAAAATDLAGIRSAISAATAAAAAPTIQVAAAGADEVSLAISALFGQHAQ
Sbjct 1 MSFVIANPEMLAAAATDLAGIRSAISAATAAAAAPTIQVAAAGADEVSLAISALFGQHAQ 60
Query 61 AYQALSAQATIFHDQFVQALTSGGNLYAAAESHTVEQMVLNAINAPTQTLFGRPLIGDGA 120
AYQALSAQATIFHDQFVQALTSGGNLYAAAESHTVEQMVLNAINAPTQTLFGRPLIGDGA
Sbjct 61 AYQALSAQATIFHDQFVQALTSGGNLYAAAESHTVEQMVLNAINAPTQTLFGRPLIGDGA 120
Query 121 NGTAENPDGQNGGLLFGNGGNGFTQTTAGVAGGNGGSAGLIGNGGAGGGGGAGAAGGLGG 180
NGTAENPDGQNGGLLFGNGGNGFTQTTAGVAGGNGGSAGLIGNGGAGG GGAG G
Sbjct 121 NGTAENPDGQNGGLLFGNGGNGFTQTTAGVAGGNGGSAGLIGNGGAGGIGGAGTGTG--- 177
Query 181 NGGWLYGNGGAGGIGGAGTGTGGHGGAGGAGGRAWLWGTGGAGGAGGDGG---------- 230
GHGGAGGAGGRAWLWGTGGAGGAG
Sbjct 178 ----------------------GHGGAGGAGGRAWLWGTGGAGGAGAAAAIGNAVTPGGA 215
Query 231 -----------WLFGDGGAGGTGGNGGSGFNSLTSSVGGAGGAGGHAGLFGAGGTGGTGG 279
WLFGDGGAGGTGGNGGSGFNSLTSSVGGAGGAGGHAGLFGAGGTGGTGG
Sbjct 216 GGAGGAGGDGGWLFGDGGAGGTGGNGGSGFNSLTSSVGGAGGAGGHAGLFGAGGTGGTGG 275
Query 280 IGGQNTETGPAASNGGAGGAGGGGGYLVGDGGAGGTGGAGGKNSSGGATLTGGTGGTGGA 339
IGGQNTETGPAASNGGAGGAGGGGGYLVGDGGAGGTGGAGGKNSSGGATLTGGTGGTGGA
Sbjct 276 IGGQNTETGPAASNGGAGGAGGGGGYLVGDGGAGGTGGAGGKNSSGGATLTGGTGGTGGA 335
Query 340 GGAAGWLYGSGGAGGAGGAGGLNNAGGATGGTGGTGGAGGSGAWLY 385
GGAAGWLYGSGGAGGAGGAGGLNNAGGATGGTGGTGGAGGSGAWLY
Sbjct 336 GGAAGWLYGSGGAGGAGGAGGLNNAGGATGGTGGTGGAGGSGAWLY 381
>gi|289444956|ref|ZP_06434700.1| predicted protein [Mycobacterium tuberculosis T46]
gi|289417875|gb|EFD15115.1| predicted protein [Mycobacterium tuberculosis T46]
Length=391
Score = 260 bits (665), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 235/235 (100%), Positives = 235/235 (100%), Gaps = 0/235 (0%)
Query 1 MSFVIANPEMLAAAATDLAGIRSAISAATAAAAAPTIQVAAAGADEVSLAISALFGQHAQ 60
MSFVIANPEMLAAAATDLAGIRSAISAATAAAAAPTIQVAAAGADEVSLAISALFGQHAQ
Sbjct 1 MSFVIANPEMLAAAATDLAGIRSAISAATAAAAAPTIQVAAAGADEVSLAISALFGQHAQ 60
Query 61 AYQALSAQATIFHDQFVQALTSGGNLYAAAESHTVEQMVLNAINAPTQTLFGRPLIGDGA 120
AYQALSAQATIFHDQFVQALTSGGNLYAAAESHTVEQMVLNAINAPTQTLFGRPLIGDGA
Sbjct 61 AYQALSAQATIFHDQFVQALTSGGNLYAAAESHTVEQMVLNAINAPTQTLFGRPLIGDGA 120
Query 121 NGTAENPDGQNGGLLFGNGGNGFTQTTAGVAGGNGGSAGLIGNGGAGGGGGAGAAGGLGG 180
NGTAENPDGQNGGLLFGNGGNGFTQTTAGVAGGNGGSAGLIGNGGAGGGGGAGAAGGLGG
Sbjct 121 NGTAENPDGQNGGLLFGNGGNGFTQTTAGVAGGNGGSAGLIGNGGAGGGGGAGAAGGLGG 180
Query 181 NGGWLYGNGGAGGIGGAGTGTGGHGGAGGAGGRAWLWGTGGAGGAGGDGGWLFGD 235
NGGWLYGNGGAGGIGGAGTGTGGHGGAGGAGGRAWLWGTGGAGGAGGDGGWLFGD
Sbjct 181 NGGWLYGNGGAGGIGGAGTGTGGHGGAGGAGGRAWLWGTGGAGGAGGDGGWLFGD 235
>gi|31794568|ref|NP_857061.1| PE-PGRS family protein [Mycobacterium bovis AF2122/97]
gi|31620165|emb|CAD95608.1| PE-PGRS FAMILY PROTEIN [Mycobacterium bovis AF2122/97]
Length=749
Score = 256 bits (655), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 483/542 (90%), Positives = 483/542 (90%), Gaps = 48/542 (8%)
Query 1 MSFVIANPEMLAAAATDLAGIRSAISAATAAAAAPTIQVAAAGADEVSLAISALFGQHAQ 60
MSFVIANPEMLAAAATDLAGIRSAISAATAAAAAPTIQVAAAGADEVSLAISALFGQHAQ
Sbjct 1 MSFVIANPEMLAAAATDLAGIRSAISAATAAAAAPTIQVAAAGADEVSLAISALFGQHAQ 60
Query 61 AYQALSAQATIFHDQFVQALTSGGNLYAAAESHTVEQMVLNAINAPTQTLFGRPLIGDGA 120
AYQALSAQATIFHDQFVQALTSGGNLYAAAESHTVEQMVLNAINAPTQTLFGRPLIGDGA
Sbjct 61 AYQALSAQATIFHDQFVQALTSGGNLYAAAESHTVEQMVLNAINAPTQTLFGRPLIGDGA 120
Query 121 NGTAENPDGQNGGLLFGNGGNGFTQTTAGVAGGNGGSAGLIGNGGAGGGGGAGAAGGLGG 180
NGTAENPDGQNGGLLFGNGGNGFTQTTAGVAGGNGGSAGLIGNGGAGG GGAG G
Sbjct 121 NGTAENPDGQNGGLLFGNGGNGFTQTTAGVAGGNGGSAGLIGNGGAGGIGGAGTGTG--- 177
Query 181 NGGWLYGNGGAGGIGGAGTGTGGHGGAGGAGGRAWLWGTGGAGGAGGDGG---------- 230
GHGGAGGAGGRAWLWGTGGAGGAG
Sbjct 178 ----------------------GHGGAGGAGGRAWLWGTGGAGGAGAAAIGNAVTPGGAG 215
Query 231 ----------WLFGDGGAGGTGGNGGSGFNSLTSSVGGAGGAGGHAGLFGAGGTGGTGGI 280
WLFGDGGAGGTGGNGGSGFNSLTSSVGGAGGAGGHAGLFGAGGTGGTGGI
Sbjct 216 GAGGAGGDGGWLFGDGGAGGTGGNGGSGFNSLTSSVGGAGGAGGHAGLFGAGGTGGTGGI 275
Query 281 GGQNTETGPAASNGGAGGAGGGGGYLVGDGGAGGTGGAGGKNSSGGATLTGGTGGTGGAG 340
GGQNTETGPAASNGGAGGAGGGGGYLVGDGGAGGTGGAGGKNSSGGATLTGGTGGTGGAG
Sbjct 276 GGQNTETGPAASNGGAGGAGGGGGYLVGDGGAGGTGGAGGKNSSGGATLTGGTGGTGGAG 335
Query 341 GAAGWLYGSGGAGGAGGAGGLNNAGGATGGTGGTGGAGGSGAWLYGNGGAAGAGGNGGNN 400
GAAGWLYGSGGAGGAGG AGGATGGTGGTGGAGGSGAWLYGNGGAAGAGGNGGNN
Sbjct 336 GAAGWLYGSGGAGGAGGLNN---AGGATGGTGGTGGAGGSGAWLYGNGGAAGAGGNGGNN 392
Query 401 TSAGTGGVGASGGTGGNAGLIGAGGHGGAGGAGGNQTGGVGNGGAGGNGGAGGAGGQLYG 460
TSAGTGGVGASGGTGGNAGLIGAGGHGGAGGAGGNQTGGVGNGGAGGNGGAGGAGGQLYG
Sbjct 393 TSAGTGGVGASGGTGGNAGLIGAGGHGGAGGAGGNQTGGVGNGGAGGNGGAGGAGGQLYG 452
Query 461 NGGDGGNGGAGGANIAGGNGSDGGAAGHGGAGGSARLIGAGGHGGDGGAGGNTAGRRADA 520
NGGDGGNGGAGGANIAGGNGSDGGAAGHGGAGGSARLIGAGGHGGDGGAGGNTAGRRADA
Sbjct 453 NGGDGGNGGAGGANIAGGNGSDGGAAGHGGAGGSARLIGAGGHGGDGGAGGNTAGRRADA 512
Query 521 IA 522
IA
Sbjct 513 IA 514
>gi|341603337|emb|CCC66018.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Moreau RDJ]
Length=750
Score = 256 bits (654), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 482/543 (89%), Positives = 482/543 (89%), Gaps = 49/543 (9%)
Query 1 MSFVIANPEMLAAAATDLAGIRSAISAATAAAAAPTIQVAAAGADEVSLAISALFGQHAQ 60
MSFVIANPEMLAAAATDLAGIRSAISAATAAAAAPTIQVAAAGADEVSLAISALFGQHAQ
Sbjct 1 MSFVIANPEMLAAAATDLAGIRSAISAATAAAAAPTIQVAAAGADEVSLAISALFGQHAQ 60
Query 61 AYQALSAQATIFHDQFVQALTSGGNLYAAAESHTVEQMVLNAINAPTQTLFGRPLIGDGA 120
AYQALSAQATIFHDQFVQALTSGGNLYAAAESHTVEQMVLNAINAPTQTLFGRPLIGDGA
Sbjct 61 AYQALSAQATIFHDQFVQALTSGGNLYAAAESHTVEQMVLNAINAPTQTLFGRPLIGDGA 120
Query 121 NGTAENPDGQNGGLLFGNGGNGFTQTTAGVAGGNGGSAGLIGNGGAGGGGGAGAAGGLGG 180
NGTAENPDGQNGGLLFGNGGNGFTQTTAGVAGGNGGSAGLIGNGGAGG GGAG G
Sbjct 121 NGTAENPDGQNGGLLFGNGGNGFTQTTAGVAGGNGGSAGLIGNGGAGGIGGAGTGTG--- 177
Query 181 NGGWLYGNGGAGGIGGAGTGTGGHGGAGGAGGRAWLWGTGGAGGAGGDGG---------- 230
GHGGAGGAGGRAWLWGTGGAGGAG
Sbjct 178 ----------------------GHGGAGGAGGRAWLWGTGGAGGAGAAAAIGNAVTPGGA 215
Query 231 -----------WLFGDGGAGGTGGNGGSGFNSLTSSVGGAGGAGGHAGLFGAGGTGGTGG 279
WLFGDGGAGGTGGNGGSGFNSLTSSVGGAGGAGGHAGLFGAGGTGGTGG
Sbjct 216 GGAGGAGGDGGWLFGDGGAGGTGGNGGSGFNSLTSSVGGAGGAGGHAGLFGAGGTGGTGG 275
Query 280 IGGQNTETGPAASNGGAGGAGGGGGYLVGDGGAGGTGGAGGKNSSGGATLTGGTGGTGGA 339
IGGQNTETGPAASNGGAGGAGGGGGYLVGDGGAGGT GAGGKNSSGGATLTGGTGGTGGA
Sbjct 276 IGGQNTETGPAASNGGAGGAGGGGGYLVGDGGAGGTPGAGGKNSSGGATLTGGTGGTGGA 335
Query 340 GGAAGWLYGSGGAGGAGGAGGLNNAGGATGGTGGTGGAGGSGAWLYGNGGAAGAGGNGGN 399
GGAAGWLYGSGGAGGAGG AGGATGGTGGTGGAGGSGAWLYGNGGAAGAGGNGGN
Sbjct 336 GGAAGWLYGSGGAGGAGGLNN---AGGATGGTGGTGGAGGSGAWLYGNGGAAGAGGNGGN 392
Query 400 NTSAGTGGVGASGGTGGNAGLIGAGGHGGAGGAGGNQTGGVGNGGAGGNGGAGGAGGQLY 459
NTSAGTGGVGASGGTGGNAGLIGAGGHGGAGGAGGNQTGGVGNGGAGGNGGAGGAGGQLY
Sbjct 393 NTSAGTGGVGASGGTGGNAGLIGAGGHGGAGGAGGNQTGGVGNGGAGGNGGAGGAGGQLY 452
Query 460 GNGGDGGNGGAGGANIAGGNGSDGGAAGHGGAGGSARLIGAGGHGGDGGAGGNTAGRRAD 519
GNGGDGGNGGAGGANIAGGNGSDGGAAGHGGAGGSARLIGAGGHGGDGGAGGNTAGRRAD
Sbjct 453 GNGGDGGNGGAGGANIAGGNGSDGGAAGHGGAGGSARLIGAGGHGGDGGAGGNTAGRRAD 512
Query 520 AIA 522
AIA
Sbjct 513 AIA 515
>gi|121639312|ref|YP_979536.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|224991809|ref|YP_002646498.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Tokyo 172]
gi|121494960|emb|CAL73446.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|224774924|dbj|BAH27730.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Tokyo 172]
Length=750
Score = 256 bits (654), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 483/543 (89%), Positives = 483/543 (89%), Gaps = 49/543 (9%)
Query 1 MSFVIANPEMLAAAATDLAGIRSAISAATAAAAAPTIQVAAAGADEVSLAISALFGQHAQ 60
MSFVIANPEMLAAAATDLAGIRSAISAATAAAAAPTIQVAAAGADEVSLAISALFGQHAQ
Sbjct 1 MSFVIANPEMLAAAATDLAGIRSAISAATAAAAAPTIQVAAAGADEVSLAISALFGQHAQ 60
Query 61 AYQALSAQATIFHDQFVQALTSGGNLYAAAESHTVEQMVLNAINAPTQTLFGRPLIGDGA 120
AYQALSAQATIFHDQFVQALTSGGNLYAAAESHTVEQMVLNAINAPTQTLFGRPLIGDGA
Sbjct 61 AYQALSAQATIFHDQFVQALTSGGNLYAAAESHTVEQMVLNAINAPTQTLFGRPLIGDGA 120
Query 121 NGTAENPDGQNGGLLFGNGGNGFTQTTAGVAGGNGGSAGLIGNGGAGGGGGAGAAGGLGG 180
NGTAENPDGQNGGLLFGNGGNGFTQTTAGVAGGNGGSAGLIGNGGAGG GGAG G
Sbjct 121 NGTAENPDGQNGGLLFGNGGNGFTQTTAGVAGGNGGSAGLIGNGGAGGIGGAGTGTG--- 177
Query 181 NGGWLYGNGGAGGIGGAGTGTGGHGGAGGAGGRAWLWGTGGAGGAGGDGG---------- 230
GHGGAGGAGGRAWLWGTGGAGGAG
Sbjct 178 ----------------------GHGGAGGAGGRAWLWGTGGAGGAGAAAAIGNAVTPGGA 215
Query 231 -----------WLFGDGGAGGTGGNGGSGFNSLTSSVGGAGGAGGHAGLFGAGGTGGTGG 279
WLFGDGGAGGTGGNGGSGFNSLTSSVGGAGGAGGHAGLFGAGGTGGTGG
Sbjct 216 GGAGGAGGDGGWLFGDGGAGGTGGNGGSGFNSLTSSVGGAGGAGGHAGLFGAGGTGGTGG 275
Query 280 IGGQNTETGPAASNGGAGGAGGGGGYLVGDGGAGGTGGAGGKNSSGGATLTGGTGGTGGA 339
IGGQNTETGPAASNGGAGGAGGGGGYLVGDGGAGGTGGAGGKNSSGGATLTGGTGGTGGA
Sbjct 276 IGGQNTETGPAASNGGAGGAGGGGGYLVGDGGAGGTGGAGGKNSSGGATLTGGTGGTGGA 335
Query 340 GGAAGWLYGSGGAGGAGGAGGLNNAGGATGGTGGTGGAGGSGAWLYGNGGAAGAGGNGGN 399
GGAAGWLYGSGGAGGAGG AGGATGGTGGTGGAGGSGAWLYGNGGAAGAGGNGGN
Sbjct 336 GGAAGWLYGSGGAGGAGGLNN---AGGATGGTGGTGGAGGSGAWLYGNGGAAGAGGNGGN 392
Query 400 NTSAGTGGVGASGGTGGNAGLIGAGGHGGAGGAGGNQTGGVGNGGAGGNGGAGGAGGQLY 459
NTSAGTGGVGASGGTGGNAGLIGAGGHGGAGGAGGNQTGGVGNGGAGGNGGAGGAGGQLY
Sbjct 393 NTSAGTGGVGASGGTGGNAGLIGAGGHGGAGGAGGNQTGGVGNGGAGGNGGAGGAGGQLY 452
Query 460 GNGGDGGNGGAGGANIAGGNGSDGGAAGHGGAGGSARLIGAGGHGGDGGAGGNTAGRRAD 519
GNGGDGGNGGAGGANIAGGNGSDGGAAGHGGAGGSARLIGAGGHGGDGGAGGNTAGRRAD
Sbjct 453 GNGGDGGNGGAGGANIAGGNGSDGGAAGHGGAGGSARLIGAGGHGGDGGAGGNTAGRRAD 512
Query 520 AIA 522
AIA
Sbjct 513 AIA 515
>gi|183985289|ref|YP_001853580.1| PE-PGRS family protein [Mycobacterium marinum M]
gi|183178615|gb|ACC43725.1| PE-PGRS family protein [Mycobacterium marinum M]
Length=723
Score = 141 bits (355), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 83/153 (55%), Positives = 102/153 (67%), Gaps = 6/153 (3%)
Query 1 MSFVIANPEMLAAAATDLAGIRSAISAATAAAAAPTIQVAAAGADEVSLAISALFGQHAQ 60
MS+++ PE+L +AATDL GI SA+S A AAA PT V AAGADEVS A+++LF + Q
Sbjct 1 MSYLLVTPELLTSAATDLEGIASALSTANLAAAVPTTGVLAAGADEVSAAVASLFAGYGQ 60
Query 61 AYQALSAQATIFHDQFVQ------ALTSGGNLYAAAESHTVEQMVLNAINAPTQTLFGRP 114
AYQ++S QA F QF+Q + + + E VL INAPTQTL GRP
Sbjct 61 AYQSISLQANAFQAQFIQAINGAGGAYAAAEAASTSPLQAFEDTVLGVINAPTQTLLGRP 120
Query 115 LIGDGANGTAENPDGQNGGLLFGNGGNGFTQTT 147
LIGDGA GTA NP+G GG L+GNGGNGF+QTT
Sbjct 121 LIGDGAAGTAANPNGGAGGFLYGNGGNGFSQTT 153
>gi|340627504|ref|YP_004745956.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059]
gi|340005694|emb|CCC44860.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059]
Length=1660
Score = 141 bits (355), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 81/125 (65%), Positives = 90/125 (72%), Gaps = 2/125 (1%)
Query 1 MSFVIANPEMLAAAATDLAGIRSAISAATAAAAAPTIQVAAAGADEVSLAISALFGQHAQ 60
MS+VIA PEM+A AA DLA I S +SAA+A AA PT +V AAGADEVS I+ALF HAQ
Sbjct 1 MSYVIATPEMMATAAFDLARIGSQVSAASAVAAMPTTEVVAAGADEVSAGIAALFSAHAQ 60
Query 61 AYQALSAQATIFHDQFVQALTSGGNLYAAAESHTVEQM--VLNAINAPTQTLFGRPLIGD 118
YQALSAQA FHDQFV LT+ Y A E M VL A+NAPTQTL GRPLIGD
Sbjct 61 EYQALSAQAAAFHDQFVHTLTAAARWYTATEIANAAAMRAVLGAVNAPTQTLLGRPLIGD 120
Query 119 GANGT 123
GA+GT
Sbjct 121 GAHGT 125
>gi|15842017|ref|NP_337054.1| PE_PGRS family protein [Mycobacterium tuberculosis CDC1551]
gi|13882294|gb|AAK46868.1| PE_PGRS family protein [Mycobacterium tuberculosis CDC1551]
Length=1665
Score = 140 bits (354), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 80/128 (63%), Positives = 92/128 (72%), Gaps = 8/128 (6%)
Query 1 MSFVIANPEMLAAAATDLAGIRSAISAATAAAAAPTIQVAAAGADEVSLAISALFGQHAQ 60
MS+VIA PEM+A AA DLA I S +SAA+A AA PT +V AAGADEVS I+ALF HAQ
Sbjct 6 MSYVIATPEMMATAAFDLARIGSQVSAASAVAAMPTTEVVAAGADEVSAGIAALFSAHAQ 65
Query 61 AYQALSAQATIFHDQFVQALTSGGNLYAAAESHTV-----EQMVLNAINAPTQTLFGRPL 115
YQALSAQA FHDQFV LT+ Y A E + ++VL A+NAPTQTL GRPL
Sbjct 66 EYQALSAQAAAFHDQFVHTLTAAARWYTATE---IANAAAMRVVLGAVNAPTQTLLGRPL 122
Query 116 IGDGANGT 123
IGDGA+GT
Sbjct 123 IGDGAHGT 130
>gi|339632516|ref|YP_004724158.1| PE-PGRS family protein [Mycobacterium africanum GM041182]
gi|339331872|emb|CCC27575.1| PE-PGRS family protein [Mycobacterium africanum GM041182]
Length=1657
Score = 140 bits (354), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 80/128 (63%), Positives = 92/128 (72%), Gaps = 8/128 (6%)
Query 1 MSFVIANPEMLAAAATDLAGIRSAISAATAAAAAPTIQVAAAGADEVSLAISALFGQHAQ 60
MS+VIA PEM+A AA DLA I S +SAA+A AA PT +V AAGADEVS I+ALF HAQ
Sbjct 1 MSYVIATPEMMATAAFDLARIGSQVSAASAVAAMPTTEVVAAGADEVSAGIAALFSAHAQ 60
Query 61 AYQALSAQATIFHDQFVQALTSGGNLYAAAESHTV-----EQMVLNAINAPTQTLFGRPL 115
YQALSAQA FHDQFV LT+ Y A E + ++VL A+NAPTQTL GRPL
Sbjct 61 EYQALSAQAAAFHDQFVHTLTAAARWYTATE---IANAAAMRVVLGAVNAPTQTLLGRPL 117
Query 116 IGDGANGT 123
IGDGA+GT
Sbjct 118 IGDGAHGT 125
>gi|57116996|ref|YP_177887.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Rv]
gi|148662325|ref|YP_001283848.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra]
gi|7441223|pir||A70869 hypothetical glycine-rich protein Rv2490c - Mycobacterium tuberculosis
(strain H37RV)
gi|41353424|emb|CAE55496.1| PE-PGRS FAMILY PROTEIN [Mycobacterium tuberculosis H37Rv]
gi|148506477|gb|ABQ74286.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra]
Length=1660
Score = 140 bits (354), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 80/128 (63%), Positives = 92/128 (72%), Gaps = 8/128 (6%)
Query 1 MSFVIANPEMLAAAATDLAGIRSAISAATAAAAAPTIQVAAAGADEVSLAISALFGQHAQ 60
MS+VIA PEM+A AA DLA I S +SAA+A AA PT +V AAGADEVS I+ALF HAQ
Sbjct 1 MSYVIATPEMMATAAFDLARIGSQVSAASAVAAMPTTEVVAAGADEVSAGIAALFSAHAQ 60
Query 61 AYQALSAQATIFHDQFVQALTSGGNLYAAAESHTV-----EQMVLNAINAPTQTLFGRPL 115
YQALSAQA FHDQFV LT+ Y A E + ++VL A+NAPTQTL GRPL
Sbjct 61 EYQALSAQAAAFHDQFVHTLTAAARWYTATE---IANAAAMRVVLGAVNAPTQTLLGRPL 117
Query 116 IGDGANGT 123
IGDGA+GT
Sbjct 118 IGDGAHGT 125
>gi|344220317|gb|AEN00948.1| PE-PGRS family protein [Mycobacterium tuberculosis CTRI-2]
Length=1644
Score = 140 bits (354), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 80/128 (63%), Positives = 92/128 (72%), Gaps = 8/128 (6%)
Query 1 MSFVIANPEMLAAAATDLAGIRSAISAATAAAAAPTIQVAAAGADEVSLAISALFGQHAQ 60
MS+VIA PEM+A AA DLA I S +SAA+A AA PT +V AAGADEVS I+ALF HAQ
Sbjct 1 MSYVIATPEMMATAAFDLARIGSQVSAASAVAAMPTTEVVAAGADEVSAGIAALFSAHAQ 60
Query 61 AYQALSAQATIFHDQFVQALTSGGNLYAAAESHTV-----EQMVLNAINAPTQTLFGRPL 115
YQALSAQA FHDQFV LT+ Y A E + ++VL A+NAPTQTL GRPL
Sbjct 61 EYQALSAQAAAFHDQFVHTLTAAARWYTATE---IANAAAMRVVLGAVNAPTQTLLGRPL 117
Query 116 IGDGANGT 123
IGDGA+GT
Sbjct 118 IGDGAHGT 125
>gi|289553720|ref|ZP_06442930.1| LOW QUALITY PROTEIN: predicted protein [Mycobacterium tuberculosis
KZN 605]
gi|289438352|gb|EFD20845.1| LOW QUALITY PROTEIN: predicted protein [Mycobacterium tuberculosis
KZN 605]
Length=1323
Score = 140 bits (353), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 80/125 (64%), Positives = 92/125 (74%), Gaps = 2/125 (1%)
Query 1 MSFVIANPEMLAAAATDLAGIRSAISAATAAAAAPTIQVAAAGADEVSLAISALFGQHAQ 60
MS+VIA PEM+A AA DLA I S +SAA+A AA PT +V AAGADEVS I+ALF HAQ
Sbjct 6 MSYVIATPEMMATAAFDLARIGSQVSAASAVAAMPTTEVVAAGADEVSAGIAALFSAHAQ 65
Query 61 AYQALSAQATIFHDQFVQALTSGGNLYAAAE--SHTVEQMVLNAINAPTQTLFGRPLIGD 118
YQALSAQA FHDQFV LT+ Y A E + ++VL A+NAPTQTL GRPLIGD
Sbjct 66 EYQALSAQAAAFHDQFVHTLTAAARWYTATEIANAAAMRVVLGAVNAPTQTLLGRPLIGD 125
Query 119 GANGT 123
GA+GT
Sbjct 126 GAHGT 130
>gi|253798432|ref|YP_003031433.1| hypothetical protein TBMG_04024 [Mycobacterium tuberculosis KZN
1435]
gi|253319935|gb|ACT24538.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN
1435]
gi|328458200|gb|AEB03623.1| hypothetical protein TBSG_01494 [Mycobacterium tuberculosis KZN
4207]
Length=1616
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 80/128 (63%), Positives = 92/128 (72%), Gaps = 8/128 (6%)
Query 1 MSFVIANPEMLAAAATDLAGIRSAISAATAAAAAPTIQVAAAGADEVSLAISALFGQHAQ 60
MS+VIA PEM+A AA DLA I S +SAA+A AA PT +V AAGADEVS I+ALF HAQ
Sbjct 1 MSYVIATPEMMATAAFDLARIGSQVSAASAVAAMPTTEVVAAGADEVSAGIAALFSAHAQ 60
Query 61 AYQALSAQATIFHDQFVQALTSGGNLYAAAESHTV-----EQMVLNAINAPTQTLFGRPL 115
YQALSAQA FHDQFV LT+ Y A E + ++VL A+NAPTQTL GRPL
Sbjct 61 EYQALSAQAAAFHDQFVHTLTAAARWYTATE---IANAAAMRVVLGAVNAPTQTLLGRPL 117
Query 116 IGDGANGT 123
IGDGA+GT
Sbjct 118 IGDGAHGT 125
>gi|183980964|ref|YP_001849255.1| PE-PGRS family protein [Mycobacterium marinum M]
gi|183174290|gb|ACC39400.1| PE-PGRS family protein [Mycobacterium marinum M]
Length=1425
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 72/121 (60%), Positives = 85/121 (71%), Gaps = 0/121 (0%)
Query 1 MSFVIANPEMLAAAATDLAGIRSAISAATAAAAAPTIQVAAAGADEVSLAISALFGQHAQ 60
MSF + P+ML AAA DLA I +AI + AAAA T + A ADEVS AI++LFG HA
Sbjct 1 MSFTVVEPQMLTAAAADLAKIGAAIDTVSTAAAASTTNLLPAAADEVSAAIASLFGTHAL 60
Query 61 AYQALSAQATIFHDQFVQALTSGGNLYAAAESHTVEQMVLNAINAPTQTLFGRPLIGDGA 120
AYQA+ AQA FHD FVQAL+ + YAA E VEQ +L INAPTQ LFGRPLIG+GA
Sbjct 61 AYQAIGAQAATFHDGFVQALSRAASRYAATEVANVEQNLLGLINAPTQALFGRPLIGNGA 120
Query 121 N 121
+
Sbjct 121 D 121
>gi|339631131|ref|YP_004722773.1| PE-PGRS family protein [Mycobacterium africanum GM041182]
gi|339330487|emb|CCC26152.1| PE-PGRS family protein [Mycobacterium africanum GM041182]
Length=672
Score = 134 bits (337), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 129/186 (70%), Positives = 148/186 (80%), Gaps = 0/186 (0%)
Query 1 MSFVIANPEMLAAAATDLAGIRSAISAATAAAAAPTIQVAAAGADEVSLAISALFGQHAQ 60
MSFV+ +P L AAA D+AGI SAISAA AAA APT +AAAGADEVS A++ALF HA
Sbjct 1 MSFVLVSPSQLMAAAADVAGIGSAISAANAAALAPTSVLAAAGADEVSAAVAALFSAHAG 60
Query 61 AYQALSAQATIFHDQFVQALTSGGNLYAAAESHTVEQMVLNAINAPTQTLFGRPLIGDGA 120
YQ L A+A +FH+QFVQALT + YA+AE+ VEQ VL INAPTQ L+GRPLIG+GA
Sbjct 61 QYQQLGARAALFHEQFVQALTGAASAYASAEATNVEQQVLGLINAPTQALWGRPLIGNGA 120
Query 121 NGTAENPDGQNGGLLFGNGGNGFTQTTAGVAGGNGGSAGLIGNGGAGGGGGAGAAGGLGG 180
+GTA NP+G GGLL+ NGGNGF+QTTAG+ GG GGSAGLIGNGG GG GGAGA GG GG
Sbjct 121 DGTAANPNGGAGGLLYSNGGNGFSQTTAGLTGGTGGSAGLIGNGGNGGAGGAGANGGAGG 180
Query 181 NGGWLY 186
NGGWLY
Sbjct 181 NGGWLY 186
>gi|183981230|ref|YP_001849521.1| PE-PGRS family protein [Mycobacterium marinum M]
gi|183174556|gb|ACC39666.1| PE-PGRS family protein [Mycobacterium marinum M]
Length=963
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 74/123 (61%), Positives = 92/123 (75%), Gaps = 2/123 (1%)
Query 1 MSFVIANPEMLAAAATDLAGIRSAISAATAAAAAPTIQVAAAGADEVSLAISALFGQHAQ 60
M+FV+ PEM+ AAA+DLA I SAI+ A A AAPT ++ AAG DEVS AI++LF HA
Sbjct 1 MAFVLVAPEMVTAAASDLANIGSAINTANTAVAAPTAELLAAGTDEVSEAIASLFSGHAL 60
Query 61 AYQALSAQATIFHDQFVQALTSGGNLYAAAE--SHTVEQMVLNAINAPTQTLFGRPLIGD 118
YQ+L A+ T FHDQFV ALT+GG LY++AE + T Q +LN +NAPTQ L GRPLIGD
Sbjct 61 DYQSLGARMTAFHDQFVAALTAGGGLYSSAEAAAATPLQDLLNVVNAPTQALLGRPLIGD 120
Query 119 GAN 121
GA+
Sbjct 121 GAD 123
>gi|183981229|ref|YP_001849520.1| PE-PGRS family protein [Mycobacterium marinum M]
gi|183174555|gb|ACC39665.1| PE-PGRS family protein [Mycobacterium marinum M]
Length=946
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 74/123 (61%), Positives = 92/123 (75%), Gaps = 2/123 (1%)
Query 1 MSFVIANPEMLAAAATDLAGIRSAISAATAAAAAPTIQVAAAGADEVSLAISALFGQHAQ 60
M+FV+ PEM+ AAA+DLA I SAI+ A A AAPT ++ AAG DEVS AI++LF HA
Sbjct 1 MAFVLVAPEMVTAAASDLANIGSAINTANTAVAAPTAELLAAGTDEVSEAIASLFSGHAL 60
Query 61 AYQALSAQATIFHDQFVQALTSGGNLYAAAE--SHTVEQMVLNAINAPTQTLFGRPLIGD 118
YQ+L A+ T FHDQFV ALT+GG LY++AE + T Q +LN +NAPTQ L GRPLIGD
Sbjct 61 DYQSLGARMTAFHDQFVAALTAGGGLYSSAEAAAATPLQDLLNVVNAPTQALLGRPLIGD 120
Query 119 GAN 121
GA+
Sbjct 121 GAD 123
>gi|339298994|gb|AEJ51104.1| PE-PGRS family protein [Mycobacterium tuberculosis CCDC5180]
Length=1657
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 77/125 (62%), Positives = 89/125 (72%), Gaps = 8/125 (6%)
Query 4 VIANPEMLAAAATDLAGIRSAISAATAAAAAPTIQVAAAGADEVSLAISALFGQHAQAYQ 63
+IA PEM+A AA DLA I S +SAA+A AA PT +V AAGADEVS I+ALF HAQ YQ
Sbjct 1 MIATPEMMATAAFDLARIGSQVSAASAVAAMPTTEVVAAGADEVSAGIAALFSAHAQEYQ 60
Query 64 ALSAQATIFHDQFVQALTSGGNLYAAAESHTV-----EQMVLNAINAPTQTLFGRPLIGD 118
ALSAQA FHDQFV LT+ Y A E + ++VL A+NAPTQTL GRPLIGD
Sbjct 61 ALSAQAAAFHDQFVHTLTAAARWYTATE---IANAAAMRVVLGAVNAPTQTLLGRPLIGD 117
Query 119 GANGT 123
GA+GT
Sbjct 118 GAHGT 122
>gi|183985012|ref|YP_001853303.1| PE-PGRS family protein [Mycobacterium marinum M]
gi|183178338|gb|ACC43448.1| PE-PGRS family protein [Mycobacterium marinum M]
Length=1451
Score = 130 bits (328), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 76/124 (62%), Positives = 94/124 (76%), Gaps = 2/124 (1%)
Query 1 MSFVIANPEMLAAAATDLAGIRSAISAATAAAAAPTIQVAAAGADEVSLAISALFGQHAQ 60
MS++IA PE++ +AA DLAGI SA+SAA +AA PT Q+ AAGADEVS AI+ALFG HAQ
Sbjct 1 MSYLIAAPELMQSAAADLAGIESALSAANVSAAVPTTQILAAGADEVSAAIAALFGAHAQ 60
Query 61 AYQALSAQATIFHDQFVQALTSGGNLYAAAESHTV--EQMVLNAINAPTQTLFGRPLIGD 118
AYQAL + T FH +FVQAL SG YA AE+ ++ Q + + +NAPTQ L GRPLIG+
Sbjct 61 AYQALGSHVTAFHQEFVQALNSGAASYANAEAASIAPLQALYDLVNAPTQALLGRPLIGN 120
Query 119 GANG 122
GANG
Sbjct 121 GANG 124
Score = 38.5 bits (88), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 19/32 (60%), Positives = 22/32 (69%), Gaps = 0/32 (0%)
Query 93 HTVEQMVLNAINAPTQTLFGRPLIGDGANGTA 124
H ++Q LNAINAP L GRPLIG+G G A
Sbjct 777 HILQQQTLNAINAPFDALTGRPLIGNGTPGAA 808
>gi|183983306|ref|YP_001851597.1| PE-PGRS family protein [Mycobacterium marinum M]
gi|183176632|gb|ACC41742.1| PE-PGRS family protein [Mycobacterium marinum M]
Length=965
Score = 130 bits (327), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 74/123 (61%), Positives = 91/123 (74%), Gaps = 2/123 (1%)
Query 1 MSFVIANPEMLAAAATDLAGIRSAISAATAAAAAPTIQVAAAGADEVSLAISALFGQHAQ 60
M+FV+ PEM+ AAA+DLA I SAI+ A A AAPT ++ AAG DEVS AI++LF HA
Sbjct 1 MAFVLVAPEMVTAAASDLANIGSAINTANTAVAAPTAELLAAGTDEVSEAIASLFSGHAL 60
Query 61 AYQALSAQATIFHDQFVQALTSGGNLYAAAE--SHTVEQMVLNAINAPTQTLFGRPLIGD 118
YQ L A+ T FHDQFV ALT+GG LY++AE + T Q +LN +NAPTQ L GRPLIGD
Sbjct 61 DYQNLGARMTAFHDQFVAALTAGGGLYSSAEAAAATPLQDLLNVVNAPTQALLGRPLIGD 120
Query 119 GAN 121
GA+
Sbjct 121 GAD 123
>gi|121636496|ref|YP_976719.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|121492143|emb|CAL70608.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Pasteur
1173P2]
Length=1303
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 77/122 (64%), Positives = 92/122 (76%), Gaps = 1/122 (0%)
Query 1 MSFVIANPEMLAAAATDLAGIRSAISAATAAAAAPTIQVAAAGADEVSLAISALFGQHAQ 60
MSFVIA PEML AATDLA I S I+AA AAAA +V A ADEVS+A++ALFG HAQ
Sbjct 1 MSFVIATPEMLTTAATDLAKIGSTITAANTAAAA-VAKVLPASADEVSVAVAALFGTHAQ 59
Query 61 AYQALSAQATIFHDQFVQALTSGGNLYAAAESHTVEQMVLNAINAPTQTLFGRPLIGDGA 120
YQ +SAQ FHD+FVQ L++ + Y AAE+ VEQ +L A+NAPTQ LFGRPLIG+GA
Sbjct 60 EYQTVSAQVATFHDRFVQTLSAAASSYVAAEAVNVEQSLLAAVNAPTQALFGRPLIGNGA 119
Query 121 NG 122
+G
Sbjct 120 DG 121
>gi|183985312|ref|YP_001853603.1| PE-PGRS family protein [Mycobacterium marinum M]
gi|183178638|gb|ACC43748.1| PE-PGRS family protein [Mycobacterium marinum M]
Length=846
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 71/129 (56%), Positives = 96/129 (75%), Gaps = 7/129 (5%)
Query 1 MSFVIANPEMLAAAATDLAGIRSAISAATAAAAAPTI-QVAAAGADEVSLAISALFGQHA 59
MS+V A+PE+L AAA +++ I S++ A A+AAAPT ++A GADEVS A++A+FG HA
Sbjct 1 MSYVFASPEVLNAAAAEVSTIGSSLQTANASAAAPTTALLSALGADEVSAAVTAMFGNHA 60
Query 60 QAYQALSAQATIFHDQFVQALTSGGNLYAAAESHT------VEQMVLNAINAPTQTLFGR 113
QAYQA+S QA FHD+FV ALT+G + Y++AE+ T + Q +LN +NAPTQ L GR
Sbjct 61 QAYQAVSTQAAEFHDRFVAALTAGADAYSSAEASTAATLQSLPQDLLNVVNAPTQALLGR 120
Query 114 PLIGDGANG 122
LIG+GANG
Sbjct 121 ALIGNGANG 129
>gi|183983104|ref|YP_001851395.1| PE-PGRS family protein [Mycobacterium marinum M]
gi|183176430|gb|ACC41540.1| PE-PGRS family protein [Mycobacterium marinum M]
Length=783
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 70/130 (54%), Positives = 89/130 (69%), Gaps = 4/130 (3%)
Query 1 MSFVIANPEMLAAAATDLAGIRSAISAATAAAAAPTIQVAAAGADEVSLAISALFGQHAQ 60
M ++ P+ LAAAAT+L + S +S AAAA PT + A ADEVS AI+ALF HAQ
Sbjct 1 MWYLSVAPDELAAAATELRDVGSIVSTVNAAAAVPTTALWPAAADEVSAAIAALFSSHAQ 60
Query 61 AYQALSAQATIFHDQFVQALTSGGNLYAAAE---SHTVEQMVLNAINAPTQTLFGRPLIG 117
YQ+LS Q +HDQFV+AL +GG Y+ AE + +EQ+ L+ IN P+QTL GRPLIG
Sbjct 61 QYQSLSVQVAAYHDQFVRALAAGGASYSLAEAASASPLEQL-LDLINLPSQTLLGRPLIG 119
Query 118 DGANGTAENP 127
DGA+GTA P
Sbjct 120 DGADGTASAP 129
>gi|183982116|ref|YP_001850407.1| PE-PGRS family protein [Mycobacterium marinum M]
gi|183175442|gb|ACC40552.1| PE-PGRS family protein [Mycobacterium marinum M]
Length=1386
Score = 124 bits (310), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 72/123 (59%), Positives = 86/123 (70%), Gaps = 8/123 (6%)
Query 1 MSFV-IANPEMLAAAATDLAGIRSAISAATAAAAAPTIQVAAAGADEVSLAISALFGQHA 59
MSFV +A PEM+A AA+DL + S ISAA AAA T + AAGADEVS I+ALFG HA
Sbjct 1 MSFVGVA-PEMVAVAASDLERLGSTISAANVAAAGSTTTILAAGADEVSAVIAALFGTHA 59
Query 60 QAYQALSAQATIFHDQFVQALTSGGNLYAAAE------SHTVEQMVLNAINAPTQTLFGR 113
YQA+S Q ++FH+QFVQ LT+G Y+AAE VEQ +LN +NAPTQ LFGR
Sbjct 60 LEYQAISTQLSVFHEQFVQTLTNGVGAYSAAELVNVLPLQNVEQDLLNLVNAPTQALFGR 119
Query 114 PLI 116
PLI
Sbjct 120 PLI 122
>gi|183980462|ref|YP_001848753.1| PE-PGRS family protein [Mycobacterium marinum M]
gi|183173788|gb|ACC38898.1| PE-PGRS family protein [Mycobacterium marinum M]
Length=1134
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 63/126 (50%), Positives = 86/126 (69%), Gaps = 0/126 (0%)
Query 1 MSFVIANPEMLAAAATDLAGIRSAISAATAAAAAPTIQVAAAGADEVSLAISALFGQHAQ 60
M+FV+ +PE +A+AA D+ I + ++ AAAA+PTI VA+A ADEVS AI+ALF QHA+
Sbjct 1 MTFVLVSPEAMASAAADIERIGALLTQGNAAAASPTINVASAAADEVSTAIAALFSQHAK 60
Query 61 AYQALSAQATIFHDQFVQALTSGGNLYAAAESHTVEQMVLNAINAPTQTLFGRPLIGDGA 120
YQ L+A+ D+F + + + N YA+AE+ +L IN PTQ L GRPLIG+GA
Sbjct 61 TYQLLAAELAAIPDRFTKTVLASANSYASAEATNAADALLGVINTPTQALLGRPLIGNGA 120
Query 121 NGTAEN 126
NGT N
Sbjct 121 NGTTVN 126
>gi|183982664|ref|YP_001850955.1| PE-PGRS family protein, PE_PGRS50 [Mycobacterium marinum M]
gi|183175990|gb|ACC41100.1| PE-PGRS family protein, PE_PGRS50 [Mycobacterium marinum M]
Length=2118
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 71/132 (54%), Positives = 89/132 (68%), Gaps = 9/132 (6%)
Query 1 MSFVIANPEMLAAAATDLAGIRSAISAATAAAAAPTIQVAAAGADEVSLAISALFGQHAQ 60
MS V +PE++A AA+DLA I S++ AA AAAA PT V +A ADEVS+AI+ LFG HA
Sbjct 1 MSLVTVSPELVAGAASDLARIGSSLGAANAAAAGPTTTVLSAAADEVSVAIATLFGTHAA 60
Query 61 AYQALSAQATIFHDQFVQALTSGGNLYAAAES---------HTVEQMVLNAINAPTQTLF 111
YQ+LSA+ FH+QFVQ LTSG +Y + E+ EQ LNAINAPTQ+
Sbjct 61 EYQSLSARMAAFHEQFVQTLTSGAGIYVSTEATNASFISALQLAEQNALNAINAPTQSWL 120
Query 112 GRPLIGDGANGT 123
GRPLIG+G + T
Sbjct 121 GRPLIGNGVDAT 132
>gi|339294426|gb|AEJ46537.1| putative PE family protein [Mycobacterium tuberculosis CCDC5079]
Length=1330
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 67/122 (55%), Positives = 82/122 (68%), Gaps = 6/122 (4%)
Query 1 MSFVIANPEMLAAAATDLAGIRSAISAATAAAAAPTIQVAAAGADEVSLAISALFGQHAQ 60
MS VI PE +AAAA+D+A I S+I A +AAA T V AAGADEVS AI+ LFG HA+
Sbjct 2 MSLVIVTPETVAAAASDVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHAR 61
Query 61 AYQALSAQATIFHDQFVQALTSGGNLYAAAESH------TVEQMVLNAINAPTQTLFGRP 114
YQA+S Q FHD+F Q L++ Y +AE+ T+E VLNA+NAPTQ L GRP
Sbjct 62 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 121
Query 115 LI 116
LI
Sbjct 122 LI 123
>gi|183980779|ref|YP_001849070.1| PE-PGRS family protein [Mycobacterium marinum M]
gi|183174105|gb|ACC39215.1| PE-PGRS family protein [Mycobacterium marinum M]
Length=1058
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 66/116 (57%), Positives = 88/116 (76%), Gaps = 2/116 (1%)
Query 1 MSFVIANPEMLAAAATDLAGIRSAISAATAAAAAPTIQVAAAGADEVSLAISALFGQHAQ 60
MS++IA P++L+AAATDLAGI + I A+ AAAAPT V +A ADE+S+ I+ALFG H Q
Sbjct 1 MSYLIATPDLLSAAATDLAGIGNTIGQASYAAAAPTTAVISAAADEISMQIAALFGAHGQ 60
Query 61 AYQALSAQATIFHDQFVQALTSGGNLYAAAESHTVEQMVLNAINAPTQTLFGRPLI 116
++QA+S+QA +FHDQFVQALT+G + + A + Q +LN +NAPTQ L RPLI
Sbjct 61 SFQAVSSQAALFHDQFVQALTTGAS--SYASAEAASQNLLNLVNAPTQALLNRPLI 114
>gi|183981221|ref|YP_001849512.1| PE-PGRS family protein [Mycobacterium marinum M]
gi|183174547|gb|ACC39657.1| PE-PGRS family protein [Mycobacterium marinum M]
Length=1610
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 71/132 (54%), Positives = 96/132 (73%), Gaps = 2/132 (1%)
Query 1 MSFVIANPEMLAAAATDLAGIRSAISAATAAAAAPTIQVAAAGADEVSLAISALFGQHAQ 60
M +V+A PE+L+ AA+DLA I SA+ AA AAA PT+ V AA ADEVS AI+ LFG +A+
Sbjct 1 MGYVVAAPEILSVAASDLANIGSALQAANAAATTPTVSVLAAAADEVSEAIAELFGTYAR 60
Query 61 AYQALSAQATIFHDQFVQALTSGGNLYAAAE--SHTVEQMVLNAINAPTQTLFGRPLIGD 118
YQA+SAQA FH +FVQA+ + Y+A E + + Q +L A+NA T+ + GRPLIG+
Sbjct 61 DYQAISAQAARFHAEFVQAVNADAEWYSATEVANASPLQTLLGAVNAQTEAMIGRPLIGN 120
Query 119 GANGTAENPDGQ 130
GA+GTA +P+GQ
Sbjct 121 GADGTAASPNGQ 132
>gi|183981460|ref|YP_001849751.1| PE-PGRS family protein [Mycobacterium marinum M]
gi|183174786|gb|ACC39896.1| PE-PGRS family protein [Mycobacterium marinum M]
Length=1483
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 70/121 (58%), Positives = 84/121 (70%), Gaps = 0/121 (0%)
Query 1 MSFVIANPEMLAAAATDLAGIRSAISAATAAAAAPTIQVAAAGADEVSLAISALFGQHAQ 60
MSFV PEM+AAA DLAGI S+ISAA AAA A T V A ADEVS AI+ALFG HA+
Sbjct 1 MSFVNVAPEMVAAAVEDLAGIGSSISAANAAAVALTTDVVPAAADEVSAAIAALFGSHAR 60
Query 61 AYQALSAQATIFHDQFVQALTSGGNLYAAAESHTVEQMVLNAINAPTQTLFGRPLIGDGA 120
YQA+SAQ+ FH++ VQ L SG + Y E +Q +LNA+N PTQ GRPLIG+G
Sbjct 61 EYQAISAQSAAFHERLVQTLRSGASAYLGTELANAQQNLLNAVNGPTQAWLGRPLIGNGT 120
Query 121 N 121
+
Sbjct 121 D 121
>gi|339631519|ref|YP_004723161.1| PE-PGRS family protein [Mycobacterium africanum GM041182]
gi|339330875|emb|CCC26546.1| PE-PGRS family protein [Mycobacterium africanum GM041182]
Length=805
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 67/122 (55%), Positives = 82/122 (68%), Gaps = 6/122 (4%)
Query 1 MSFVIANPEMLAAAATDLAGIRSAISAATAAAAAPTIQVAAAGADEVSLAISALFGQHAQ 60
MS VI PE +AAAA+D+A I S+I A +AAA T V AAGADEVS AI+ LFG HA+
Sbjct 1 MSLVIVTPETVAAAASDVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60
Query 61 AYQALSAQATIFHDQFVQALTSGGNLYAAAESH------TVEQMVLNAINAPTQTLFGRP 114
YQA+S Q FHD+F Q L++ Y +AE+ T+E VLNA+NAPTQ L GRP
Sbjct 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120
Query 115 LI 116
LI
Sbjct 121 LI 122
>gi|339633513|ref|YP_004725155.1| PE-PGRS family protein [Mycobacterium africanum GM041182]
gi|339332869|emb|CCC28593.1| PE-PGRS family protein [Mycobacterium africanum GM041182]
Length=1817
Score = 117 bits (292), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 77/123 (63%), Positives = 90/123 (74%), Gaps = 0/123 (0%)
Query 1 MSFVIANPEMLAAAATDLAGIRSAISAATAAAAAPTIQVAAAGADEVSLAISALFGQHAQ 60
MSFV+ +PE+++AAA DLA + S ISAA AAAA T QV AAGADEVS I+ALFG +
Sbjct 1 MSFVLISPEVVSAAAGDLANVGSTISAANKAAAAATTQVLAAGADEVSARIAALFGMYGL 60
Query 61 AYQALSAQATIFHDQFVQALTSGGNLYAAAESHTVEQMVLNAINAPTQTLFGRPLIGDGA 120
YQA+SAQ +H QFVQ L +G Y AE+ VEQ +LN INAPTQTL GRPLIGDGA
Sbjct 61 EYQAISAQVAAYHQQFVQTLRTGAASYMLAEATNVEQNLLNLINAPTQTLLGRPLIGDGA 120
Query 121 NGT 123
N T
Sbjct 121 NAT 123
>gi|341603451|emb|CCC66132.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Moreau RDJ]
Length=1695
Score = 117 bits (292), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 77/123 (63%), Positives = 90/123 (74%), Gaps = 0/123 (0%)
Query 1 MSFVIANPEMLAAAATDLAGIRSAISAATAAAAAPTIQVAAAGADEVSLAISALFGQHAQ 60
MSFV+ +PE+++AAA DLA + S ISAA AAAA T QV AAGADEVS I+ALFG +
Sbjct 1 MSFVLISPEVVSAAAGDLANVGSTISAANKAAAAATTQVLAAGADEVSARIAALFGMYGL 60
Query 61 AYQALSAQATIFHDQFVQALTSGGNLYAAAESHTVEQMVLNAINAPTQTLFGRPLIGDGA 120
YQA+SAQ +H QFVQ L +G Y AE+ VEQ +LN INAPTQTL GRPLIGDGA
Sbjct 61 EYQAISAQVAAYHQQFVQTLRTGAASYMLAEATNVEQNLLNLINAPTQTLLGRPLIGDGA 120
Query 121 NGT 123
N T
Sbjct 121 NAT 123
>gi|224991926|ref|YP_002646615.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Tokyo 172]
gi|224775041|dbj|BAH27847.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Tokyo 172]
Length=1695
Score = 117 bits (292), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 77/123 (63%), Positives = 90/123 (74%), Gaps = 0/123 (0%)
Query 1 MSFVIANPEMLAAAATDLAGIRSAISAATAAAAAPTIQVAAAGADEVSLAISALFGQHAQ 60
MSFV+ +PE+++AAA DLA + S ISAA AAAA T QV AAGADEVS I+ALFG +
Sbjct 1 MSFVLISPEVVSAAAGDLANVGSTISAANKAAAAATTQVLAAGADEVSARIAALFGMYGL 60
Query 61 AYQALSAQATIFHDQFVQALTSGGNLYAAAESHTVEQMVLNAINAPTQTLFGRPLIGDGA 120
YQA+SAQ +H QFVQ L +G Y AE+ VEQ +LN INAPTQTL GRPLIGDGA
Sbjct 61 EYQAISAQVAAYHQQFVQTLRTGAASYMLAEATNVEQNLLNLINAPTQTLLGRPLIGDGA 120
Query 121 NGT 123
N T
Sbjct 121 NAT 123
>gi|339298064|gb|AEJ50174.1| putative PE family protein [Mycobacterium tuberculosis CCDC5180]
Length=1330
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 66/122 (55%), Positives = 82/122 (68%), Gaps = 6/122 (4%)
Query 1 MSFVIANPEMLAAAATDLAGIRSAISAATAAAAAPTIQVAAAGADEVSLAISALFGQHAQ 60
MS VI PE +AAAA+D+A I S+I A +AAA T V AAGAD+VS AI+ LFG HA+
Sbjct 2 MSLVIVTPETVAAAASDVARIGSSIGVANSAAAGSTTSVLAAGADDVSAAIATLFGSHAR 61
Query 61 AYQALSAQATIFHDQFVQALTSGGNLYAAAESH------TVEQMVLNAINAPTQTLFGRP 114
YQA+S Q FHD+F Q L++ Y +AE+ T+E VLNA+NAPTQ L GRP
Sbjct 62 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 121
Query 115 LI 116
LI
Sbjct 122 LI 123
>gi|253800553|ref|YP_003033554.1| hypothetical protein TBMG_04114 [Mycobacterium tuberculosis KZN
1435]
gi|253322056|gb|ACT26659.1| predicted protein [Mycobacterium tuberculosis KZN 1435]
gi|328460284|gb|AEB05707.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 4207]
Length=1767
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 77/123 (63%), Positives = 90/123 (74%), Gaps = 0/123 (0%)
Query 1 MSFVIANPEMLAAAATDLAGIRSAISAATAAAAAPTIQVAAAGADEVSLAISALFGQHAQ 60
MSFV+ +PE+++AAA DLA + S ISAA AAAA T QV AAGADEVS I+ALFG +
Sbjct 1 MSFVLISPEVVSAAAGDLANVGSTISAANKAAAAATTQVLAAGADEVSARIAALFGMYGL 60
Query 61 AYQALSAQATIFHDQFVQALTSGGNLYAAAESHTVEQMVLNAINAPTQTLFGRPLIGDGA 120
YQA+SAQ +H QFVQ L +G Y AE+ VEQ +LN INAPTQTL GRPLIGDGA
Sbjct 61 EYQAISAQVAAYHQQFVQTLRTGAASYMLAEATNVEQNLLNLINAPTQTLLGRPLIGDGA 120
Query 121 NGT 123
N T
Sbjct 121 NAT 123
>gi|344221345|gb|AEN01976.1| PE-PGRS family protein [Mycobacterium tuberculosis CTRI-2]
Length=1787
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 77/123 (63%), Positives = 90/123 (74%), Gaps = 0/123 (0%)
Query 1 MSFVIANPEMLAAAATDLAGIRSAISAATAAAAAPTIQVAAAGADEVSLAISALFGQHAQ 60
MSFV+ +PE+++AAA DLA + S ISAA AAAA T QV AAGADEVS I+ALFG +
Sbjct 1 MSFVLISPEVVSAAAGDLANVGSTISAANKAAAAATTQVLAAGADEVSARIAALFGMYGL 60
Query 61 AYQALSAQATIFHDQFVQALTSGGNLYAAAESHTVEQMVLNAINAPTQTLFGRPLIGDGA 120
YQA+SAQ +H QFVQ L +G Y AE+ VEQ +LN INAPTQTL GRPLIGDGA
Sbjct 61 EYQAISAQVAAYHQQFVQTLRTGAASYMLAEATNVEQNLLNLINAPTQTLLGRPLIGDGA 120
Query 121 NGT 123
N T
Sbjct 121 NAT 123
>gi|339299931|gb|AEJ52041.1| PE-PGRS family protein [Mycobacterium tuberculosis CCDC5180]
Length=1542
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 77/123 (63%), Positives = 90/123 (74%), Gaps = 0/123 (0%)
Query 1 MSFVIANPEMLAAAATDLAGIRSAISAATAAAAAPTIQVAAAGADEVSLAISALFGQHAQ 60
MSFV+ +PE+++AAA DLA + S ISAA AAAA T QV AAGADEVS I+ALFG +
Sbjct 1 MSFVLISPEVVSAAAGDLANVGSTISAANKAAAAATTQVLAAGADEVSARIAALFGMYGL 60
Query 61 AYQALSAQATIFHDQFVQALTSGGNLYAAAESHTVEQMVLNAINAPTQTLFGRPLIGDGA 120
YQA+SAQ +H QFVQ L +G Y AE+ VEQ +LN INAPTQTL GRPLIGDGA
Sbjct 61 EYQAISAQVAAYHQQFVQTLRTGAASYMLAEATNVEQNLLNLINAPTQTLLGRPLIGDGA 120
Query 121 NGT 123
N T
Sbjct 121 NAT 123
>gi|31794687|ref|NP_857180.1| PE-PGRS family protein [Mycobacterium bovis AF2122/97]
gi|31620284|emb|CAD95727.1| PE-PGRS FAMILY PROTEIN [Mycobacterium bovis AF2122/97]
Length=1938
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 77/123 (63%), Positives = 90/123 (74%), Gaps = 0/123 (0%)
Query 1 MSFVIANPEMLAAAATDLAGIRSAISAATAAAAAPTIQVAAAGADEVSLAISALFGQHAQ 60
MSFV+ +PE+++AAA DLA + S ISAA AAAA T QV AAGADEVS I+ALFG +
Sbjct 1 MSFVLISPEVVSAAAGDLANVGSTISAANKAAAAATTQVLAAGADEVSARIAALFGMYGL 60
Query 61 AYQALSAQATIFHDQFVQALTSGGNLYAAAESHTVEQMVLNAINAPTQTLFGRPLIGDGA 120
YQA+SAQ +H QFVQ L +G Y AE+ VEQ +LN INAPTQTL GRPLIGDGA
Sbjct 61 EYQAISAQVAAYHQQFVQTLRTGAASYMLAEATNVEQNLLNLINAPTQTLLGRPLIGDGA 120
Query 121 NGT 123
N T
Sbjct 121 NAT 123
>gi|121639430|ref|YP_979654.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|121495078|emb|CAL73564.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Pasteur
1173P2]
Length=1810
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 77/123 (63%), Positives = 90/123 (74%), Gaps = 0/123 (0%)
Query 1 MSFVIANPEMLAAAATDLAGIRSAISAATAAAAAPTIQVAAAGADEVSLAISALFGQHAQ 60
MSFV+ +PE+++AAA DLA + S ISAA AAAA T QV AAGADEVS I+ALFG +
Sbjct 1 MSFVLISPEVVSAAAGDLANVGSTISAANKAAAAATTQVLAAGADEVSARIAALFGMYGL 60
Query 61 AYQALSAQATIFHDQFVQALTSGGNLYAAAESHTVEQMVLNAINAPTQTLFGRPLIGDGA 120
YQA+SAQ +H QFVQ L +G Y AE+ VEQ +LN INAPTQTL GRPLIGDGA
Sbjct 61 EYQAISAQVAAYHQQFVQTLRTGAASYMLAEATNVEQNLLNLINAPTQTLLGRPLIGDGA 120
Query 121 NGT 123
N T
Sbjct 121 NAT 123
>gi|121637380|ref|YP_977603.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|224989855|ref|YP_002644542.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Tokyo 172]
gi|121493027|emb|CAL71498.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|224772968|dbj|BAH25774.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Tokyo 172]
gi|341601399|emb|CCC64072.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Moreau RDJ]
Length=1399
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/122 (55%), Positives = 81/122 (67%), Gaps = 6/122 (4%)
Query 1 MSFVIANPEMLAAAATDLAGIRSAISAATAAAAAPTIQVAAAGADEVSLAISALFGQHAQ 60
MS VI PE +AAAA D+A I S+I A +AAA T V AAGADEVS AI+ LFG HA+
Sbjct 1 MSLVIVAPETVAAAALDVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60
Query 61 AYQALSAQATIFHDQFVQALTSGGNLYAAAESH------TVEQMVLNAINAPTQTLFGRP 114
YQA+S Q FHD+F Q L++ Y +AE+ T+E VLNA+NAPTQ L GRP
Sbjct 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120
Query 115 LI 116
LI
Sbjct 121 LI 122
>gi|339631517|ref|YP_004723159.1| PE-PGRS family protein [Mycobacterium africanum GM041182]
gi|339330873|emb|CCC26544.1| PE-PGRS family protein [Mycobacterium africanum GM041182]
Length=1389
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/122 (55%), Positives = 81/122 (67%), Gaps = 6/122 (4%)
Query 1 MSFVIANPEMLAAAATDLAGIRSAISAATAAAAAPTIQVAAAGADEVSLAISALFGQHAQ 60
MS VI PE +AAAA D+A I S+I A +AAA T V AAGADEVS AI+ LFG HA+
Sbjct 1 MSLVIVAPETVAAAALDVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60
Query 61 AYQALSAQATIFHDQFVQALTSGGNLYAAAESH------TVEQMVLNAINAPTQTLFGRP 114
YQA+S Q FHD+F Q L++ Y +AE+ T+E VLNA+NAPTQ L GRP
Sbjct 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120
Query 115 LI 116
LI
Sbjct 121 LI 122
>gi|148824718|ref|YP_001289472.1| PE-PGRS family protein [Mycobacterium tuberculosis F11]
gi|148723245|gb|ABR07870.1| PE-PGRS family protein [Mycobacterium tuberculosis F11]
Length=1888
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 77/123 (63%), Positives = 90/123 (74%), Gaps = 0/123 (0%)
Query 1 MSFVIANPEMLAAAATDLAGIRSAISAATAAAAAPTIQVAAAGADEVSLAISALFGQHAQ 60
MSFV+ +PE+++AAA DLA + S ISAA AAAA T QV AAGADEVS I+ALFG +
Sbjct 1 MSFVLISPEVVSAAAGDLANVGSTISAANKAAAAATTQVLAAGADEVSARIAALFGMYGL 60
Query 61 AYQALSAQATIFHDQFVQALTSGGNLYAAAESHTVEQMVLNAINAPTQTLFGRPLIGDGA 120
YQA+SAQ +H QFVQ L +G Y AE+ VEQ +LN INAPTQTL GRPLIGDGA
Sbjct 61 EYQAISAQVAAYHQQFVQTLRTGAASYMLAEATNVEQNLLNLINAPTQTLLGRPLIGDGA 120
Query 121 NGT 123
N T
Sbjct 121 NAT 123
>gi|31792644|ref|NP_855137.1| PE-PGRS family protein [Mycobacterium bovis AF2122/97]
gi|31618234|emb|CAD96152.1| PE-PGRS FAMILY PROTEIN [Mycobacterium bovis AF2122/97]
Length=1408
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 67/122 (55%), Positives = 81/122 (67%), Gaps = 6/122 (4%)
Query 1 MSFVIANPEMLAAAATDLAGIRSAISAATAAAAAPTIQVAAAGADEVSLAISALFGQHAQ 60
MS VI PE +AAAA D+A I S+I A +AAA T V AAGADEVS AI+ LFG HA+
Sbjct 1 MSLVIVAPETVAAAALDVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60
Query 61 AYQALSAQATIFHDQFVQALTSGGNLYAAAESH------TVEQMVLNAINAPTQTLFGRP 114
YQA+S Q FHD+F Q L++ Y +AE+ T+E VLNA+NAPTQ L GRP
Sbjct 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120
Query 115 LI 116
LI
Sbjct 121 LI 122
>gi|340626466|ref|YP_004744918.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059]
gi|340004656|emb|CCC43800.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059]
Length=1006
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 67/122 (55%), Positives = 82/122 (68%), Gaps = 6/122 (4%)
Query 1 MSFVIANPEMLAAAATDLAGIRSAISAATAAAAAPTIQVAAAGADEVSLAISALFGQHAQ 60
MS VI PE++AAAA+D+A I S AA + AA T V AAGADEVS AI+ LFG HA+
Sbjct 1 MSLVIVTPELVAAAASDVARIGSGFGAANSTAAGSTTSVLAAGADEVSAAIATLFGSHAR 60
Query 61 AYQALSAQATIFHDQFVQALTSGGNLYAAAESH------TVEQMVLNAINAPTQTLFGRP 114
YQA+S Q FHD+FVQ L++ Y +AE+ T+E VLNA+NAPTQ L GRP
Sbjct 61 EYQAISTQVAAFHDRFVQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120
Query 115 LI 116
LI
Sbjct 121 LI 122
Lambda K H
0.306 0.139 0.426
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 1740973870928
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40