BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv3390 Length=236 Score E Sequences producing significant alignments: (Bits) Value gi|308406145|ref|ZP_07669524.1| lipoprotein lpqD [Mycobacterium ... 486 1e-135 gi|15610526|ref|NP_217907.1| lipoprotein LpqD [Mycobacterium tub... 485 3e-135 gi|15842983|ref|NP_338020.1| putative lipoprotein [Mycobacterium... 481 2e-134 gi|289747212|ref|ZP_06506590.1| lipoprotein LpqD [Mycobacterium ... 481 3e-134 gi|340628368|ref|YP_004746820.1| putative lipoprotein LPQD [Myco... 481 5e-134 gi|294995838|ref|ZP_06801529.1| lipoprotein lpqD [Mycobacterium ... 452 1e-125 gi|323717876|gb|EGB27065.1| lipoprotein lpqD [Mycobacterium tube... 449 2e-124 gi|289449086|ref|ZP_06438830.1| phosphoglycerate mutase [Mycobac... 377 7e-103 gi|240167864|ref|ZP_04746523.1| lipoprotein, LpqD [Mycobacterium... 353 8e-96 gi|336459722|gb|EGO38643.1| fructose-2,6-bisphosphatase [Mycobac... 348 5e-94 gi|41409579|ref|NP_962415.1| LpqD [Mycobacterium avium subsp. pa... 345 3e-93 gi|254776768|ref|ZP_05218284.1| LpqD [Mycobacterium avium subsp.... 342 2e-92 gi|254821990|ref|ZP_05226991.1| LpqD [Mycobacterium intracellula... 342 4e-92 gi|118616686|ref|YP_905018.1| lipoprotein, LpqD [Mycobacterium u... 337 9e-91 gi|118466235|ref|YP_883475.1| phosphoglycerate mutase [Mycobacte... 335 4e-90 gi|296168810|ref|ZP_06850492.1| LpqD family protein [Mycobacteri... 331 6e-89 gi|183981176|ref|YP_001849467.1| lipoprotein, LpqD [Mycobacteriu... 321 5e-86 gi|342861587|ref|ZP_08718234.1| LpqD [Mycobacterium colombiense ... 321 5e-86 gi|333991853|ref|YP_004524467.1| hypothetical protein JDM601_321... 270 1e-70 gi|226361881|ref|YP_002779659.1| phosphoglycerate mutase family ... 198 4e-49 gi|296165633|ref|ZP_06848155.1| phosphoglycerate mutase [Mycobac... 192 2e-47 gi|118472076|ref|YP_890757.1| phosphoglycerate mutase [Mycobacte... 190 1e-46 gi|108802104|ref|YP_642301.1| phosphoglycerate mutase [Mycobacte... 188 5e-46 gi|126438085|ref|YP_001073776.1| phosphoglycerate mutase [Mycoba... 188 6e-46 gi|119871257|ref|YP_941209.1| phosphoglycerate mutase [Mycobacte... 188 7e-46 gi|296169349|ref|ZP_06850974.1| possible LpqD protein [Mycobacte... 168 6e-40 gi|326382213|ref|ZP_08203905.1| phosphoglycerate mutase family p... 165 5e-39 gi|120406210|ref|YP_956039.1| phosphoglycerate mutase [Mycobacte... 162 3e-38 gi|312138801|ref|YP_004006137.1| phosphoglycerate mutase family ... 159 3e-37 gi|326381982|ref|ZP_08203675.1| phosphoglycerate mutase family p... 156 3e-36 gi|145225155|ref|YP_001135833.1| phosphoglycerate mutase [Mycoba... 149 3e-34 gi|118463647|ref|YP_883905.1| pe_pgrs family protein [Mycobacter... 147 9e-34 gi|254821911|ref|ZP_05226912.1| pe_pgrs family protein [Mycobact... 141 8e-32 gi|296141329|ref|YP_003648572.1| phosphoglycerate mutase [Tsukam... 139 5e-31 gi|254777216|ref|ZP_05218732.1| pe_pgrs family protein [Mycobact... 138 8e-31 gi|342859131|ref|ZP_08715785.1| pe_pgrs family protein [Mycobact... 138 8e-31 gi|41409966|ref|NP_962802.1| hypothetical protein MAP3868 [Mycob... 137 1e-30 gi|308372941|ref|ZP_07430459.2| PE-PGRS family protein [Mycobact... 131 9e-29 gi|294993212|ref|ZP_06798903.1| PE-PGRS family protein [Mycobact... 131 1e-28 gi|289573372|ref|ZP_06453599.1| pe-pgrs family protein [Mycobact... 130 1e-28 gi|148660530|ref|YP_001282053.1| PE-PGRS family protein [Mycobac... 130 1e-28 gi|15840168|ref|NP_335205.1| PE_PGRS family protein [Mycobacteri... 130 1e-28 gi|289442156|ref|ZP_06431900.1| PE-PGRS family protein [Mycobact... 130 1e-28 gi|340625773|ref|YP_004744225.1| PE-PGRS family protein [Mycobac... 130 1e-28 gi|339630823|ref|YP_004722465.1| PE-PGRS family protein [Mycobac... 130 1e-28 gi|31791941|ref|NP_854434.1| PE-PGRS family protein [Mycobacteri... 130 1e-28 gi|289756841|ref|ZP_06516219.1| PE-PGRS family protein [Mycobact... 130 2e-28 gi|336460392|gb|EGO39292.1| fructose-2,6-bisphosphatase [Mycobac... 130 2e-28 gi|119962181|ref|YP_949575.1| phosphoglycerate mutase family pro... 127 2e-27 gi|240170010|ref|ZP_04748669.1| PE-PGRS family protein [Mycobact... 125 5e-27 >gi|308406145|ref|ZP_07669524.1| lipoprotein lpqD [Mycobacterium tuberculosis SUMu012] gi|308364370|gb|EFP53221.1| lipoprotein lpqD [Mycobacterium tuberculosis SUMu012] Length=261 Score = 486 bits (1250), Expect = 1e-135, Method: Compositional matrix adjust. Identities = 236/236 (100%), Positives = 236/236 (100%), Gaps = 0/236 (0%) Query 1 MAKRTPVRKACTVLAVLAATLLLGACGGPTQPRSITLTFIRNAQSQANADGIIDTDMPGS 60 MAKRTPVRKACTVLAVLAATLLLGACGGPTQPRSITLTFIRNAQSQANADGIIDTDMPGS Sbjct 26 MAKRTPVRKACTVLAVLAATLLLGACGGPTQPRSITLTFIRNAQSQANADGIIDTDMPGS 85 Query 61 GLSADGKAEAQQVAHQVSRRDVDSIYSSPMAADQQTAGPLAGELGKQVEILPGLQAINAG 120 GLSADGKAEAQQVAHQVSRRDVDSIYSSPMAADQQTAGPLAGELGKQVEILPGLQAINAG Sbjct 86 GLSADGKAEAQQVAHQVSRRDVDSIYSSPMAADQQTAGPLAGELGKQVEILPGLQAINAG 145 Query 121 WFNGKPESMANSTYMLAPADWLAGDVHNTIPGSISGTEFNSQFSAAVRKIYDSGHNTPVV 180 WFNGKPESMANSTYMLAPADWLAGDVHNTIPGSISGTEFNSQFSAAVRKIYDSGHNTPVV Sbjct 146 WFNGKPESMANSTYMLAPADWLAGDVHNTIPGSISGTEFNSQFSAAVRKIYDSGHNTPVV 205 Query 181 FSQGVAIMIWTLMNARNSRDSLLTTHPLPNIGRVVITGNPVTGWRLVEWDGIRNFT 236 FSQGVAIMIWTLMNARNSRDSLLTTHPLPNIGRVVITGNPVTGWRLVEWDGIRNFT Sbjct 206 FSQGVAIMIWTLMNARNSRDSLLTTHPLPNIGRVVITGNPVTGWRLVEWDGIRNFT 261 >gi|15610526|ref|NP_217907.1| lipoprotein LpqD [Mycobacterium tuberculosis H37Rv] gi|31794570|ref|NP_857063.1| lipoprotein LpqD [Mycobacterium bovis AF2122/97] gi|121639314|ref|YP_979538.1| putative lipoprotein lpqD [Mycobacterium bovis BCG str. Pasteur 1173P2] 49 more sequence titles Length=236 Score = 485 bits (1248), Expect = 3e-135, Method: Compositional matrix adjust. Identities = 236/236 (100%), Positives = 236/236 (100%), Gaps = 0/236 (0%) Query 1 MAKRTPVRKACTVLAVLAATLLLGACGGPTQPRSITLTFIRNAQSQANADGIIDTDMPGS 60 MAKRTPVRKACTVLAVLAATLLLGACGGPTQPRSITLTFIRNAQSQANADGIIDTDMPGS Sbjct 1 MAKRTPVRKACTVLAVLAATLLLGACGGPTQPRSITLTFIRNAQSQANADGIIDTDMPGS 60 Query 61 GLSADGKAEAQQVAHQVSRRDVDSIYSSPMAADQQTAGPLAGELGKQVEILPGLQAINAG 120 GLSADGKAEAQQVAHQVSRRDVDSIYSSPMAADQQTAGPLAGELGKQVEILPGLQAINAG Sbjct 61 GLSADGKAEAQQVAHQVSRRDVDSIYSSPMAADQQTAGPLAGELGKQVEILPGLQAINAG 120 Query 121 WFNGKPESMANSTYMLAPADWLAGDVHNTIPGSISGTEFNSQFSAAVRKIYDSGHNTPVV 180 WFNGKPESMANSTYMLAPADWLAGDVHNTIPGSISGTEFNSQFSAAVRKIYDSGHNTPVV Sbjct 121 WFNGKPESMANSTYMLAPADWLAGDVHNTIPGSISGTEFNSQFSAAVRKIYDSGHNTPVV 180 Query 181 FSQGVAIMIWTLMNARNSRDSLLTTHPLPNIGRVVITGNPVTGWRLVEWDGIRNFT 236 FSQGVAIMIWTLMNARNSRDSLLTTHPLPNIGRVVITGNPVTGWRLVEWDGIRNFT Sbjct 181 FSQGVAIMIWTLMNARNSRDSLLTTHPLPNIGRVVITGNPVTGWRLVEWDGIRNFT 236 >gi|15842983|ref|NP_338020.1| putative lipoprotein [Mycobacterium tuberculosis CDC1551] gi|13883323|gb|AAK47834.1| lipoprotein, putative [Mycobacterium tuberculosis CDC1551] Length=236 Score = 481 bits (1239), Expect = 2e-134, Method: Compositional matrix adjust. Identities = 235/236 (99%), Positives = 235/236 (99%), Gaps = 0/236 (0%) Query 1 MAKRTPVRKACTVLAVLAATLLLGACGGPTQPRSITLTFIRNAQSQANADGIIDTDMPGS 60 MAKRTPVRKACTVLAVLAATLLLGACGGPTQPRSITLTFIRNAQSQANADGIIDTDMPGS Sbjct 1 MAKRTPVRKACTVLAVLAATLLLGACGGPTQPRSITLTFIRNAQSQANADGIIDTDMPGS 60 Query 61 GLSADGKAEAQQVAHQVSRRDVDSIYSSPMAADQQTAGPLAGELGKQVEILPGLQAINAG 120 GLSADGKAEAQQVAHQVSRRDVDSIYSSPMAADQQTAGPLAGELGKQVEILPGLQAINAG Sbjct 61 GLSADGKAEAQQVAHQVSRRDVDSIYSSPMAADQQTAGPLAGELGKQVEILPGLQAINAG 120 Query 121 WFNGKPESMANSTYMLAPADWLAGDVHNTIPGSISGTEFNSQFSAAVRKIYDSGHNTPVV 180 WFNGKPESMANSTYMLAPADWLAGDVHNTIPGSISGTEFNSQFSAAVRKIYDSGHNTPVV Sbjct 121 WFNGKPESMANSTYMLAPADWLAGDVHNTIPGSISGTEFNSQFSAAVRKIYDSGHNTPVV 180 Query 181 FSQGVAIMIWTLMNARNSRDSLLTTHPLPNIGRVVITGNPVTGWRLVEWDGIRNFT 236 FSQGVAIMIWTLMNARNSRDSLLTTHPLPNIGRVVITGNP TGWRLVEWDGIRNFT Sbjct 181 FSQGVAIMIWTLMNARNSRDSLLTTHPLPNIGRVVITGNPGTGWRLVEWDGIRNFT 236 >gi|289747212|ref|ZP_06506590.1| lipoprotein LpqD [Mycobacterium tuberculosis 02_1987] gi|289747217|ref|ZP_06506595.1| lipoprotein lpqD [Mycobacterium tuberculosis 02_1987] gi|289687740|gb|EFD55228.1| lipoprotein LpqD [Mycobacterium tuberculosis 02_1987] gi|289687745|gb|EFD55233.1| lipoprotein lpqD [Mycobacterium tuberculosis 02_1987] Length=236 Score = 481 bits (1239), Expect = 3e-134, Method: Compositional matrix adjust. Identities = 235/236 (99%), Positives = 235/236 (99%), Gaps = 0/236 (0%) Query 1 MAKRTPVRKACTVLAVLAATLLLGACGGPTQPRSITLTFIRNAQSQANADGIIDTDMPGS 60 MAKRTPVRKACTVLAVLAATLLLGACGGPTQPRSITLTFIRNAQSQANADGIIDTDMPGS Sbjct 1 MAKRTPVRKACTVLAVLAATLLLGACGGPTQPRSITLTFIRNAQSQANADGIIDTDMPGS 60 Query 61 GLSADGKAEAQQVAHQVSRRDVDSIYSSPMAADQQTAGPLAGELGKQVEILPGLQAINAG 120 GLSADGKAEAQQVAHQVSRRDVDSIYSSPMAADQQTAGPLA ELGKQVEILPGLQAINAG Sbjct 61 GLSADGKAEAQQVAHQVSRRDVDSIYSSPMAADQQTAGPLAVELGKQVEILPGLQAINAG 120 Query 121 WFNGKPESMANSTYMLAPADWLAGDVHNTIPGSISGTEFNSQFSAAVRKIYDSGHNTPVV 180 WFNGKPESMANSTYMLAPADWLAGDVHNTIPGSISGTEFNSQFSAAVRKIYDSGHNTPVV Sbjct 121 WFNGKPESMANSTYMLAPADWLAGDVHNTIPGSISGTEFNSQFSAAVRKIYDSGHNTPVV 180 Query 181 FSQGVAIMIWTLMNARNSRDSLLTTHPLPNIGRVVITGNPVTGWRLVEWDGIRNFT 236 FSQGVAIMIWTLMNARNSRDSLLTTHPLPNIGRVVITGNPVTGWRLVEWDGIRNFT Sbjct 181 FSQGVAIMIWTLMNARNSRDSLLTTHPLPNIGRVVITGNPVTGWRLVEWDGIRNFT 236 >gi|340628368|ref|YP_004746820.1| putative lipoprotein LPQD [Mycobacterium canettii CIPT 140010059] gi|340006558|emb|CCC45744.1| putative conserved lipoprotein LPQD [Mycobacterium canettii CIPT 140010059] Length=236 Score = 481 bits (1237), Expect = 5e-134, Method: Compositional matrix adjust. Identities = 235/236 (99%), Positives = 235/236 (99%), Gaps = 0/236 (0%) Query 1 MAKRTPVRKACTVLAVLAATLLLGACGGPTQPRSITLTFIRNAQSQANADGIIDTDMPGS 60 MAKRTPV KACTVLAVLAATLLLGACGGPTQPRSITLTFIRNAQSQANADGIIDTDMPGS Sbjct 1 MAKRTPVWKACTVLAVLAATLLLGACGGPTQPRSITLTFIRNAQSQANADGIIDTDMPGS 60 Query 61 GLSADGKAEAQQVAHQVSRRDVDSIYSSPMAADQQTAGPLAGELGKQVEILPGLQAINAG 120 GLSADGKAEAQQVAHQVSRRDVDSIYSSPMAADQQTAGPLAGELGKQVEILPGLQAINAG Sbjct 61 GLSADGKAEAQQVAHQVSRRDVDSIYSSPMAADQQTAGPLAGELGKQVEILPGLQAINAG 120 Query 121 WFNGKPESMANSTYMLAPADWLAGDVHNTIPGSISGTEFNSQFSAAVRKIYDSGHNTPVV 180 WFNGKPESMANSTYMLAPADWLAGDVHNTIPGSISGTEFNSQFSAAVRKIYDSGHNTPVV Sbjct 121 WFNGKPESMANSTYMLAPADWLAGDVHNTIPGSISGTEFNSQFSAAVRKIYDSGHNTPVV 180 Query 181 FSQGVAIMIWTLMNARNSRDSLLTTHPLPNIGRVVITGNPVTGWRLVEWDGIRNFT 236 FSQGVAIMIWTLMNARNSRDSLLTTHPLPNIGRVVITGNPVTGWRLVEWDGIRNFT Sbjct 181 FSQGVAIMIWTLMNARNSRDSLLTTHPLPNIGRVVITGNPVTGWRLVEWDGIRNFT 236 >gi|294995838|ref|ZP_06801529.1| lipoprotein lpqD [Mycobacterium tuberculosis 210] gi|297636051|ref|ZP_06953831.1| lipoprotein lpqD [Mycobacterium tuberculosis KZN 4207] gi|308232449|ref|ZP_07416068.2| lipoprotein lpqD [Mycobacterium tuberculosis SUMu001] 17 more sequence titles Length=221 Score = 452 bits (1164), Expect = 1e-125, Method: Compositional matrix adjust. Identities = 220/221 (99%), Positives = 221/221 (100%), Gaps = 0/221 (0%) Query 16 VLAATLLLGACGGPTQPRSITLTFIRNAQSQANADGIIDTDMPGSGLSADGKAEAQQVAH 75 +LAATLLLGACGGPTQPRSITLTFIRNAQSQANADGIIDTDMPGSGLSADGKAEAQQVAH Sbjct 1 MLAATLLLGACGGPTQPRSITLTFIRNAQSQANADGIIDTDMPGSGLSADGKAEAQQVAH 60 Query 76 QVSRRDVDSIYSSPMAADQQTAGPLAGELGKQVEILPGLQAINAGWFNGKPESMANSTYM 135 QVSRRDVDSIYSSPMAADQQTAGPLAGELGKQVEILPGLQAINAGWFNGKPESMANSTYM Sbjct 61 QVSRRDVDSIYSSPMAADQQTAGPLAGELGKQVEILPGLQAINAGWFNGKPESMANSTYM 120 Query 136 LAPADWLAGDVHNTIPGSISGTEFNSQFSAAVRKIYDSGHNTPVVFSQGVAIMIWTLMNA 195 LAPADWLAGDVHNTIPGSISGTEFNSQFSAAVRKIYDSGHNTPVVFSQGVAIMIWTLMNA Sbjct 121 LAPADWLAGDVHNTIPGSISGTEFNSQFSAAVRKIYDSGHNTPVVFSQGVAIMIWTLMNA 180 Query 196 RNSRDSLLTTHPLPNIGRVVITGNPVTGWRLVEWDGIRNFT 236 RNSRDSLLTTHPLPNIGRVVITGNPVTGWRLVEWDGIRNFT Sbjct 181 RNSRDSLLTTHPLPNIGRVVITGNPVTGWRLVEWDGIRNFT 221 >gi|323717876|gb|EGB27065.1| lipoprotein lpqD [Mycobacterium tuberculosis CDC1551A] Length=221 Score = 449 bits (1155), Expect = 2e-124, Method: Compositional matrix adjust. Identities = 219/221 (99%), Positives = 220/221 (99%), Gaps = 0/221 (0%) Query 16 VLAATLLLGACGGPTQPRSITLTFIRNAQSQANADGIIDTDMPGSGLSADGKAEAQQVAH 75 +LAATLLLGACGGPTQPRSITLTFIRNAQSQANADGIIDTDMPGSGLSADGKAEAQQVAH Sbjct 1 MLAATLLLGACGGPTQPRSITLTFIRNAQSQANADGIIDTDMPGSGLSADGKAEAQQVAH 60 Query 76 QVSRRDVDSIYSSPMAADQQTAGPLAGELGKQVEILPGLQAINAGWFNGKPESMANSTYM 135 QVSRRDVDSIYSSPMAADQQTAGPLAGELGKQVEILPGLQAINAGWFNGKPESMANSTYM Sbjct 61 QVSRRDVDSIYSSPMAADQQTAGPLAGELGKQVEILPGLQAINAGWFNGKPESMANSTYM 120 Query 136 LAPADWLAGDVHNTIPGSISGTEFNSQFSAAVRKIYDSGHNTPVVFSQGVAIMIWTLMNA 195 LAPADWLAGDVHNTIPGSISGTEFNSQFSAAVRKIYDSGHNTPVVFSQGVAIMIWTLMNA Sbjct 121 LAPADWLAGDVHNTIPGSISGTEFNSQFSAAVRKIYDSGHNTPVVFSQGVAIMIWTLMNA 180 Query 196 RNSRDSLLTTHPLPNIGRVVITGNPVTGWRLVEWDGIRNFT 236 RNSRDSLLTTHPLPNIGRVVITGNP TGWRLVEWDGIRNFT Sbjct 181 RNSRDSLLTTHPLPNIGRVVITGNPGTGWRLVEWDGIRNFT 221 >gi|289449086|ref|ZP_06438830.1| phosphoglycerate mutase [Mycobacterium tuberculosis CPHL_A] gi|289422044|gb|EFD19245.1| phosphoglycerate mutase [Mycobacterium tuberculosis CPHL_A] Length=184 Score = 377 bits (969), Expect = 7e-103, Method: Compositional matrix adjust. Identities = 184/184 (100%), Positives = 184/184 (100%), Gaps = 0/184 (0%) Query 1 MAKRTPVRKACTVLAVLAATLLLGACGGPTQPRSITLTFIRNAQSQANADGIIDTDMPGS 60 MAKRTPVRKACTVLAVLAATLLLGACGGPTQPRSITLTFIRNAQSQANADGIIDTDMPGS Sbjct 1 MAKRTPVRKACTVLAVLAATLLLGACGGPTQPRSITLTFIRNAQSQANADGIIDTDMPGS 60 Query 61 GLSADGKAEAQQVAHQVSRRDVDSIYSSPMAADQQTAGPLAGELGKQVEILPGLQAINAG 120 GLSADGKAEAQQVAHQVSRRDVDSIYSSPMAADQQTAGPLAGELGKQVEILPGLQAINAG Sbjct 61 GLSADGKAEAQQVAHQVSRRDVDSIYSSPMAADQQTAGPLAGELGKQVEILPGLQAINAG 120 Query 121 WFNGKPESMANSTYMLAPADWLAGDVHNTIPGSISGTEFNSQFSAAVRKIYDSGHNTPVV 180 WFNGKPESMANSTYMLAPADWLAGDVHNTIPGSISGTEFNSQFSAAVRKIYDSGHNTPVV Sbjct 121 WFNGKPESMANSTYMLAPADWLAGDVHNTIPGSISGTEFNSQFSAAVRKIYDSGHNTPVV 180 Query 181 FSQG 184 FSQG Sbjct 181 FSQG 184 >gi|240167864|ref|ZP_04746523.1| lipoprotein, LpqD [Mycobacterium kansasii ATCC 12478] Length=241 Score = 353 bits (907), Expect = 8e-96, Method: Compositional matrix adjust. Identities = 168/241 (70%), Positives = 204/241 (85%), Gaps = 5/241 (2%) Query 1 MAKRTPVRK----ACTVLAVLAATLLLGACGGP-TQPRSITLTFIRNAQSQANADGIIDT 55 MAKRT + K VLAVLA+ +++GACGG TQ R+IT+TFIRNAQSQANADG+I+T Sbjct 1 MAKRTMIWKMTWKTSNVLAVLASVMIVGACGGGGTQARNITVTFIRNAQSQANADGVINT 60 Query 56 DMPGSGLSADGKAEAQQVAHQVSRRDVDSIYSSPMAADQQTAGPLAGELGKQVEILPGLQ 115 ++PG+GL+ADGK +AQQ+AHQV+ + DSIYSSPMA QQTA PLAGELGKQVEI+ LQ Sbjct 61 EVPGTGLTADGKGQAQQLAHQVAHNEFDSIYSSPMAEAQQTAAPLAGELGKQVEIITDLQ 120 Query 116 AINAGWFNGKPESMANSTYMLAPADWLAGDVHNTIPGSISGTEFNSQFSAAVRKIYDSGH 175 +INAGW+NG+PES ANSTY+LAP W+ GD ++IPGSI+G +FNSQFS+AVRKIYDSGH Sbjct 121 SINAGWYNGEPESRANSTYLLAPMGWINGDATHSIPGSITGDQFNSQFSSAVRKIYDSGH 180 Query 176 NTPVVFSQGVAIMIWTLMNARNSRDSLLTTHPLPNIGRVVITGNPVTGWRLVEWDGIRNF 235 N PVVFSQG AIM+WTLMN +N + +LL HPLPNIGRVV+TGNP+ GW+LV+WDGIRNF Sbjct 181 NKPVVFSQGTAIMVWTLMNVKNPKLNLLNNHPLPNIGRVVVTGNPIDGWKLVDWDGIRNF 240 Query 236 T 236 T Sbjct 241 T 241 >gi|336459722|gb|EGO38643.1| fructose-2,6-bisphosphatase [Mycobacterium avium subsp. paratuberculosis S397] Length=237 Score = 348 bits (892), Expect = 5e-94, Method: Compositional matrix adjust. Identities = 158/235 (68%), Positives = 193/235 (83%), Gaps = 0/235 (0%) Query 1 MAKRTPVRKACTVLAVLAATLLLGACGGPTQPRSITLTFIRNAQSQANADGIIDTDMPGS 60 M KR+ +RK LAVL AT+ + ACGG Q RSIT+TF+R+AQS+ANA G IDT++PG Sbjct 1 MPKRSMIRKVSVALAVLTATVTVAACGGSPQARSITVTFVRHAQSEANASGTIDTEVPGP 60 Query 61 GLSADGKAEAQQVAHQVSRRDVDSIYSSPMAADQQTAGPLAGELGKQVEILPGLQAINAG 120 GLS +GK +A+QVAHQ+ R+D DS+Y+S M QQTA PLA ELGKQVE+LPG+Q INAG Sbjct 61 GLSPEGKGQAEQVAHQLGRKDYDSVYASTMTRAQQTAAPLAAELGKQVEVLPGIQEINAG 120 Query 121 WFNGKPESMANSTYMLAPADWLAGDVHNTIPGSISGTEFNSQFSAAVRKIYDSGHNTPVV 180 W+NGKPESMA STY++APA+WL GDV ++IPGSISG EFN QF+AAV KIY+SGH PVV Sbjct 121 WYNGKPESMAKSTYLVAPANWLKGDVSDSIPGSISGKEFNDQFTAAVNKIYNSGHRNPVV 180 Query 181 FSQGVAIMIWTLMNARNSRDSLLTTHPLPNIGRVVITGNPVTGWRLVEWDGIRNF 235 FS +IM+WTLMN RN++DSL+ THPLPN GRVVI GNP+TGW LV+WDGIR+F Sbjct 181 FSHANSIMVWTLMNTRNAKDSLMNTHPLPNTGRVVINGNPITGWTLVDWDGIRDF 235 >gi|41409579|ref|NP_962415.1| LpqD [Mycobacterium avium subsp. paratuberculosis K-10] gi|41398410|gb|AAS06031.1| LpqD [Mycobacterium avium subsp. paratuberculosis K-10] Length=237 Score = 345 bits (885), Expect = 3e-93, Method: Compositional matrix adjust. Identities = 157/235 (67%), Positives = 192/235 (82%), Gaps = 0/235 (0%) Query 1 MAKRTPVRKACTVLAVLAATLLLGACGGPTQPRSITLTFIRNAQSQANADGIIDTDMPGS 60 M KR+ +RK LAVL AT+ + ACGG Q RSIT+TF+R+AQS+ANA G IDT++PG Sbjct 1 MPKRSMIRKVSVALAVLTATVTVAACGGSPQARSITVTFVRHAQSEANASGTIDTEVPGP 60 Query 61 GLSADGKAEAQQVAHQVSRRDVDSIYSSPMAADQQTAGPLAGELGKQVEILPGLQAINAG 120 GLS +GK +A+QVAHQ+ R+D DS+Y+S M QQTA PLA ELGKQVE+LPG+Q INAG Sbjct 61 GLSPEGKGQAEQVAHQLGRKDYDSVYASTMTRAQQTAAPLAAELGKQVEVLPGIQEINAG 120 Query 121 WFNGKPESMANSTYMLAPADWLAGDVHNTIPGSISGTEFNSQFSAAVRKIYDSGHNTPVV 180 W+NGK ESMA STY++APA+WL GDV ++IPGSISG EFN QF+AAV KIY+SGH PVV Sbjct 121 WYNGKSESMAKSTYLVAPANWLKGDVSDSIPGSISGKEFNDQFTAAVNKIYNSGHRNPVV 180 Query 181 FSQGVAIMIWTLMNARNSRDSLLTTHPLPNIGRVVITGNPVTGWRLVEWDGIRNF 235 FS +IM+WTLMN RN++DSL+ THPLPN GRVVI GNP+TGW LV+WDGIR+F Sbjct 181 FSHANSIMVWTLMNTRNAKDSLMNTHPLPNTGRVVINGNPITGWTLVDWDGIRDF 235 >gi|254776768|ref|ZP_05218284.1| LpqD [Mycobacterium avium subsp. avium ATCC 25291] Length=232 Score = 342 bits (878), Expect = 2e-92, Method: Compositional matrix adjust. Identities = 155/229 (68%), Positives = 189/229 (83%), Gaps = 0/229 (0%) Query 7 VRKACTVLAVLAATLLLGACGGPTQPRSITLTFIRNAQSQANADGIIDTDMPGSGLSADG 66 +RK LAVL AT+ + ACGG Q RSIT+TF+R+AQS+ANA G IDT++PG GLS +G Sbjct 2 IRKVSVALAVLTATVTVAACGGSPQARSITVTFVRHAQSEANASGTIDTEVPGPGLSPEG 61 Query 67 KAEAQQVAHQVSRRDVDSIYSSPMAADQQTAGPLAGELGKQVEILPGLQAINAGWFNGKP 126 K +A+QVAHQ+ R+D DS+Y+S M QQTA PLA ELGKQVE+LPG+Q INAGW+NGKP Sbjct 62 KGQAEQVAHQLGRKDYDSVYASTMTRAQQTAAPLAAELGKQVEVLPGIQEINAGWYNGKP 121 Query 127 ESMANSTYMLAPADWLAGDVHNTIPGSISGTEFNSQFSAAVRKIYDSGHNTPVVFSQGVA 186 ESMA STY++APA+WL GDV ++IPGSISG EFN QF+AAV KIY+SGH PVVFS + Sbjct 122 ESMAKSTYLVAPANWLKGDVSDSIPGSISGKEFNDQFTAAVNKIYNSGHRNPVVFSHANS 181 Query 187 IMIWTLMNARNSRDSLLTTHPLPNIGRVVITGNPVTGWRLVEWDGIRNF 235 IM+WTLMN RN++DSL+ THPLPN GRVVI GNP+TGW LV+WDGIR+F Sbjct 182 IMVWTLMNTRNAKDSLMNTHPLPNTGRVVINGNPITGWTLVDWDGIRDF 230 >gi|254821990|ref|ZP_05226991.1| LpqD [Mycobacterium intracellulare ATCC 13950] Length=237 Score = 342 bits (876), Expect = 4e-92, Method: Compositional matrix adjust. Identities = 154/235 (66%), Positives = 191/235 (82%), Gaps = 0/235 (0%) Query 1 MAKRTPVRKACTVLAVLAATLLLGACGGPTQPRSITLTFIRNAQSQANADGIIDTDMPGS 60 M+KR+ RKA +A L AT+++ CGG Q RSIT+TF+R+AQS+ANA G IDTD+PG Sbjct 1 MSKRSLFRKASVAVAALTATVIVAGCGGSPQARSITVTFVRHAQSEANAAGTIDTDVPGP 60 Query 61 GLSADGKAEAQQVAHQVSRRDVDSIYSSPMAADQQTAGPLAGELGKQVEILPGLQAINAG 120 GL+ +GK +A+Q+AHQ+ R+D DS+Y+S M QQTA PLA ELGKQVEILPG+Q INAG Sbjct 61 GLTPEGKGQAEQIAHQLGRKDYDSVYASTMTRTQQTAAPLAAELGKQVEILPGIQEINAG 120 Query 121 WFNGKPESMANSTYMLAPADWLAGDVHNTIPGSISGTEFNSQFSAAVRKIYDSGHNTPVV 180 W+NGKPESMA STY++AP +W+ GDV +IPGSISG EFN QF+AAV K+Y+SGH PVV Sbjct 121 WYNGKPESMAKSTYLVAPVNWIKGDVSYSIPGSISGKEFNDQFTAAVNKVYNSGHRNPVV 180 Query 181 FSQGVAIMIWTLMNARNSRDSLLTTHPLPNIGRVVITGNPVTGWRLVEWDGIRNF 235 FS AIM+WTLMN RN ++SL+ THPLPN GRVVITGNP+TGW LV+WDGIR+F Sbjct 181 FSHANAIMVWTLMNTRNGKESLMNTHPLPNTGRVVITGNPMTGWTLVDWDGIRDF 235 >gi|118616686|ref|YP_905018.1| lipoprotein, LpqD [Mycobacterium ulcerans Agy99] gi|118568796|gb|ABL03547.1| conserved lipoprotein, LpqD [Mycobacterium ulcerans Agy99] Length=237 Score = 337 bits (864), Expect = 9e-91, Method: Compositional matrix adjust. Identities = 157/236 (67%), Positives = 195/236 (83%), Gaps = 1/236 (0%) Query 1 MAKRTPVRKACTVLAVLAATLLLGACGGPT-QPRSITLTFIRNAQSQANADGIIDTDMPG 59 MAKR+ + VLA+LA +L GACGG + Q RSITLTFIRNAQSQA+A+GII T++PG Sbjct 1 MAKRSMIWNTSKVLALLATAMLPGACGGGSPQARSITLTFIRNAQSQADAEGIIATELPG 60 Query 60 SGLSADGKAEAQQVAHQVSRRDVDSIYSSPMAADQQTAGPLAGELGKQVEILPGLQAINA 119 +GLS+DGK +AQQ+ HQ R + DSIY+SPM A QQTA PLA +L KQ EI+PGLQ+I+A Sbjct 61 TGLSSDGKDQAQQLTHQFGRSEFDSIYTSPMEAAQQTAAPLARQLSKQAEIVPGLQSIDA 120 Query 120 GWFNGKPESMANSTYMLAPADWLAGDVHNTIPGSISGTEFNSQFSAAVRKIYDSGHNTPV 179 GW+NGKP+SMA+ TYM+AP W+ G+V +IPGS SG++FNS+F+ A+RKIYD GHN PV Sbjct 121 GWYNGKPDSMADRTYMVAPVSWIDGNVEASIPGSTSGSDFNSRFTGAIRKIYDGGHNRPV 180 Query 180 VFSQGVAIMIWTLMNARNSRDSLLTTHPLPNIGRVVITGNPVTGWRLVEWDGIRNF 235 VFSQG AIM+WTLMN +N + +LL THPLPNIGRVVI+GNP TGW+LV+WDGIRNF Sbjct 181 VFSQGTAIMVWTLMNVKNPKTNLLNTHPLPNIGRVVISGNPATGWKLVDWDGIRNF 236 >gi|118466235|ref|YP_883475.1| phosphoglycerate mutase [Mycobacterium avium 104] gi|118167522|gb|ABK68419.1| phosphoglycerate mutase family protein [Mycobacterium avium 104] Length=226 Score = 335 bits (858), Expect = 4e-90, Method: Compositional matrix adjust. Identities = 152/222 (69%), Positives = 185/222 (84%), Gaps = 0/222 (0%) Query 14 LAVLAATLLLGACGGPTQPRSITLTFIRNAQSQANADGIIDTDMPGSGLSADGKAEAQQV 73 LA L AT+ + ACGG Q RSIT+TF+R+AQS+ANA G IDT++PG GLS +GK +A+QV Sbjct 3 LAALIATVTVAACGGSPQARSITVTFVRHAQSEANASGTIDTEVPGPGLSPEGKGQAEQV 62 Query 74 AHQVSRRDVDSIYSSPMAADQQTAGPLAGELGKQVEILPGLQAINAGWFNGKPESMANST 133 AHQ+ R+D DS+Y+S M QQTA PLA ELGKQVE+LPG+Q INAGW+NGKPESMA ST Sbjct 63 AHQLGRKDYDSVYASTMTRAQQTAAPLAAELGKQVEVLPGIQEINAGWYNGKPESMAKST 122 Query 134 YMLAPADWLAGDVHNTIPGSISGTEFNSQFSAAVRKIYDSGHNTPVVFSQGVAIMIWTLM 193 Y++APA+WL GDV ++IPGSISG EFN QF+AAV KIY+SGH PVVFS +IM+WTLM Sbjct 123 YLVAPANWLKGDVSDSIPGSISGKEFNDQFTAAVNKIYNSGHRNPVVFSHANSIMVWTLM 182 Query 194 NARNSRDSLLTTHPLPNIGRVVITGNPVTGWRLVEWDGIRNF 235 N RN++DSL+ THPLPN GRVVI GNP+TGW LV+WDGIR+F Sbjct 183 NTRNAKDSLMNTHPLPNTGRVVINGNPITGWTLVDWDGIRDF 224 >gi|296168810|ref|ZP_06850492.1| LpqD family protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295896513|gb|EFG76160.1| LpqD family protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length=237 Score = 331 bits (848), Expect = 6e-89, Method: Compositional matrix adjust. Identities = 154/235 (66%), Positives = 187/235 (80%), Gaps = 0/235 (0%) Query 1 MAKRTPVRKACTVLAVLAATLLLGACGGPTQPRSITLTFIRNAQSQANADGIIDTDMPGS 60 M KR V LAVL A L++GACGG Q RSIT+TFIR+A+S+ANA+G+IDT +PG Sbjct 1 MPKRRWVSNVSKALAVLTAALVVGACGGSPQARSITVTFIRHAESEANANGVIDTSVPGP 60 Query 61 GLSADGKAEAQQVAHQVSRRDVDSIYSSPMAADQQTAGPLAGELGKQVEILPGLQAINAG 120 GL+ +GK +AQQVAHQ +D D IY+S MA QQTA PLA ELGKQVE+L G+Q INAG Sbjct 61 GLTPEGKGQAQQVAHQAGHKDYDGIYASTMARAQQTAAPLAAELGKQVEVLQGIQEINAG 120 Query 121 WFNGKPESMANSTYMLAPADWLAGDVHNTIPGSISGTEFNSQFSAAVRKIYDSGHNTPVV 180 WF+GKP + N+TY+LAPADWL GDV N+IPGSI G +FN QF+AAV+K+Y SG + PVV Sbjct 121 WFDGKPVAQENATYLLAPADWLKGDVQNSIPGSIDGKQFNEQFTAAVQKVYSSGQHNPVV 180 Query 181 FSQGVAIMIWTLMNARNSRDSLLTTHPLPNIGRVVITGNPVTGWRLVEWDGIRNF 235 FS AI WTLMNA+N++DSLL +HP+PNIGRVVITGNPVTGW LV+WDGIR+F Sbjct 181 FSHKFAIEYWTLMNAKNAKDSLLNSHPIPNIGRVVITGNPVTGWTLVDWDGIRDF 235 >gi|183981176|ref|YP_001849467.1| lipoprotein, LpqD [Mycobacterium marinum M] gi|183174502|gb|ACC39612.1| conserved lipoprotein, LpqD [Mycobacterium marinum M] Length=232 Score = 321 bits (823), Expect = 5e-86, Method: Compositional matrix adjust. Identities = 147/211 (70%), Positives = 180/211 (86%), Gaps = 1/211 (0%) Query 26 CGGPT-QPRSITLTFIRNAQSQANADGIIDTDMPGSGLSADGKAEAQQVAHQVSRRDVDS 84 CGG + Q RSITLTFIRNAQSQA+A+GII T++PG+GLS+DGK +AQQ+ HQ R + DS Sbjct 21 CGGGSPQARSITLTFIRNAQSQADAEGIIATELPGTGLSSDGKDQAQQLTHQFGRSEFDS 80 Query 85 IYSSPMAADQQTAGPLAGELGKQVEILPGLQAINAGWFNGKPESMANSTYMLAPADWLAG 144 IY+SPM A QQTA PLAGEL KQ EI+PGLQ+I+AGW+NGKP+SMA+ TYM+AP W+ G Sbjct 81 IYTSPMEAAQQTAAPLAGELSKQAEIVPGLQSIDAGWYNGKPDSMADRTYMVAPVSWIDG 140 Query 145 DVHNTIPGSISGTEFNSQFSAAVRKIYDSGHNTPVVFSQGVAIMIWTLMNARNSRDSLLT 204 +V +IPGS SG++FNS+F+ A+RKIYD GHN PVVFSQG AIM+WTLMN +N + +LL Sbjct 141 NVEASIPGSTSGSDFNSRFTGAIRKIYDGGHNKPVVFSQGTAIMVWTLMNVKNPKTNLLN 200 Query 205 THPLPNIGRVVITGNPVTGWRLVEWDGIRNF 235 THPLPNIGRVVI+GNP TGW+LV+WDGIRNF Sbjct 201 THPLPNIGRVVISGNPATGWKLVDWDGIRNF 231 >gi|342861587|ref|ZP_08718234.1| LpqD [Mycobacterium colombiense CECT 3035] gi|342131076|gb|EGT84365.1| LpqD [Mycobacterium colombiense CECT 3035] Length=232 Score = 321 bits (823), Expect = 5e-86, Method: Compositional matrix adjust. Identities = 150/229 (66%), Positives = 190/229 (83%), Gaps = 0/229 (0%) Query 7 VRKACTVLAVLAATLLLGACGGPTQPRSITLTFIRNAQSQANADGIIDTDMPGSGLSADG 66 +RKA LA L AT+++ CGG Q RSIT+TFIR+AQS+ANA G IDT++PG GL+ +G Sbjct 2 IRKATMALAALTATMVVAGCGGSPQARSITVTFIRHAQSEANASGTIDTEVPGPGLTPEG 61 Query 67 KAEAQQVAHQVSRRDVDSIYSSPMAADQQTAGPLAGELGKQVEILPGLQAINAGWFNGKP 126 K +A+Q+AHQ+ R+D DS+Y+S M QQTA PLA ELGKQVE+LPG+Q INAGWFNGKP Sbjct 62 KGQAEQLAHQLGRKDYDSVYASTMTRTQQTAAPLAAELGKQVEVLPGIQEINAGWFNGKP 121 Query 127 ESMANSTYMLAPADWLAGDVHNTIPGSISGTEFNSQFSAAVRKIYDSGHNTPVVFSQGVA 186 ESMA STYMLAP +W+ GDV ++IPGS+SG EFN QF+AA+ KIY+SGH PVVFS + Sbjct 122 ESMAKSTYMLAPVNWINGDVSDSIPGSVSGKEFNDQFTAAINKIYNSGHRNPVVFSHRNS 181 Query 187 IMIWTLMNARNSRDSLLTTHPLPNIGRVVITGNPVTGWRLVEWDGIRNF 235 IM+WTLMNA+N++DSL+ +HP+PN GRVVI+GNP+TGW LV+WDGIR+F Sbjct 182 IMVWTLMNAQNAKDSLMDSHPIPNTGRVVISGNPMTGWTLVDWDGIRDF 230 >gi|333991853|ref|YP_004524467.1| hypothetical protein JDM601_3213 [Mycobacterium sp. JDM601] gi|333487821|gb|AEF37213.1| lipoprotein LpqD [Mycobacterium sp. JDM601] Length=238 Score = 270 bits (690), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 126/212 (60%), Positives = 157/212 (75%), Gaps = 0/212 (0%) Query 24 GACGGPTQPRSITLTFIRNAQSQANADGIIDTDMPGSGLSADGKAEAQQVAHQVSRRDVD 83 G C G R+ITLT IR+ +S+ANA GIIDT +PG GL+ G+A+AQ++ Q+SR D Sbjct 27 GGCSGTPHTRTITLTLIRHGESEANAAGIIDTTVPGPGLTEKGRAQAQEIVDQLSRNHYD 86 Query 84 SIYSSPMAADQQTAGPLAGELGKQVEILPGLQAINAGWFNGKPESMANSTYMLAPADWLA 143 +Y+S MA QQTA PLA ELG+QV+ILPGL+ I+AGWF K ++ N+TY+LAP W+ Sbjct 87 GVYASSMARSQQTAAPLARELGRQVQILPGLREIDAGWFADKQNTVVNATYLLAPQAWIH 146 Query 144 GDVHNTIPGSISGTEFNSQFSAAVRKIYDSGHNTPVVFSQGVAIMIWTLMNARNSRDSLL 203 GD IPGSI G +FN +FSAAV++IYDSG PV FS +IM WTLMN RN RD L+ Sbjct 147 GDRTAAIPGSIDGNQFNDEFSAAVQRIYDSGDANPVAFSHSASIMAWTLMNVRNPRDELM 206 Query 204 TTHPLPNIGRVVITGNPVTGWRLVEWDGIRNF 235 T HPLPNIGRVVI G+P TGW+LV+WDGIR F Sbjct 207 TDHPLPNIGRVVIKGSPSTGWKLVDWDGIRAF 238 >gi|226361881|ref|YP_002779659.1| phosphoglycerate mutase family protein [Rhodococcus opacus B4] gi|226240366|dbj|BAH50714.1| phosphoglycerate mutase family protein [Rhodococcus opacus B4] Length=247 Score = 198 bits (504), Expect = 4e-49, Method: Compositional matrix adjust. Identities = 107/242 (45%), Positives = 145/242 (60%), Gaps = 17/242 (7%) Query 7 VRKACTVLAVLAATLL----LGACGGPTQ---PRS----------ITLTFIRNAQSQANA 49 + + C++LA + T+ L AC G T P S IT+T +R+A+S NA Sbjct 1 MNRRCSILATASTTVATVVSLTACAGTTTASGPSSAPPTRSDAEPITITLMRHAESAGNA 60 Query 50 DGIIDTDMPGSGLSADGKAEAQQVAHQVSRRDVDSIYSSPMAADQQTAGPLAGELGKQVE 109 G+IDT PG ++ G+ EA+ A + + D D +Y+S M Q+TA +A + + VE Sbjct 61 SGLIDTSTPGPNITDKGRHEARAAADRFAGHDFDGVYASTMVRTQETAEFMARAVDEPVE 120 Query 110 ILPGLQAINAGWFNGKPESMANSTYMLAPADWLAGDVHNTIPGSISGTEFNSQFSAAVRK 169 +LPGL+ I AG + G+PE+ A STY+ AP WL G IPGSI G EF+ +F AV + Sbjct 121 VLPGLREIEAGQYEGQPEATAQSTYLAAPTSWLQGQRDARIPGSIDGNEFDQRFDDAVEQ 180 Query 170 IYDSGHNTPVVFSQGVAIMIWTLMNARNSRDSLLTTHPLPNIGRVVITGNPVTGWRLVEW 229 I DSG P+ F+ G +IMIWTLMN N SLL T+PL N G VVITG P TGW LV+W Sbjct 181 ISDSGDTHPIAFAHGGSIMIWTLMNVDNPDVSLLKTNPLRNTGYVVITGRPDTGWTLVDW 240 Query 230 DG 231 +G Sbjct 241 NG 242 >gi|296165633|ref|ZP_06848155.1| phosphoglycerate mutase [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295899004|gb|EFG78488.1| phosphoglycerate mutase [Mycobacterium parascrofulaceum ATCC BAA-614] Length=229 Score = 192 bits (489), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 100/199 (51%), Positives = 128/199 (65%), Gaps = 1/199 (0%) Query 32 PRSITLTFIRNAQSQANADGIIDTDMPGSGLSADGKAEAQQVAHQVSRRDVDSIYSSPMA 91 P +ITLT +R+AQS NA G+IDT PG L+A G +A + +S + D +++S M Sbjct 26 PHNITLTLVRHAQSAGNASGLIDTSSPGPELTAKGWCQAVLDSGPLSAKHYDGVFASTMT 85 Query 92 ADQQTAGPLAGELGKQVEILPGLQAINAGWFNGKPESMANSTYMLAPADWLAGDVHNTIP 151 QQTA P A LG+ +++LPGL+ I AG F G+PE A +T+M P WL GD IP Sbjct 86 RTQQTATPTAQALGEPIDVLPGLREIEAGQFEGQPEVNA-TTFMAVPMRWLHGDRSARIP 144 Query 152 GSISGTEFNSQFSAAVRKIYDSGHNTPVVFSQGVAIMIWTLMNARNSRDSLLTTHPLPNI 211 GS+ G EF ++F+ AV+ IYDSG PV FS G AIMIWTLMN R SL LPN+ Sbjct 145 GSLDGDEFEARFNEAVQHIYDSGDVHPVAFSHGGAIMIWTLMNIREPDLSLPARQQLPNM 204 Query 212 GRVVITGNPVTGWRLVEWD 230 GRVV+ GNP+ GW L EWD Sbjct 205 GRVVLQGNPLQGWTLSEWD 223 >gi|118472076|ref|YP_890757.1| phosphoglycerate mutase [Mycobacterium smegmatis str. MC2 155] gi|118173363|gb|ABK74259.1| phosphoglycerate mutase family protein [Mycobacterium smegmatis str. MC2 155] Length=235 Score = 190 bits (483), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 99/201 (50%), Positives = 125/201 (63%), Gaps = 1/201 (0%) Query 33 RSITLTFIRNAQSQANADGIIDTDMPGSGLSADGKAEAQQVAHQVSR-RDVDSIYSSPMA 91 R ITLT +R+AQS+ NA G+IDT PG L+A G+ +A+ A +++ D IY+S M Sbjct 32 RIITLTLVRHAQSEGNASGLIDTSTPGPPLTALGREQAETAAQKLAAGHTFDGIYASTMI 91 Query 92 ADQQTAGPLAGELGKQVEILPGLQAINAGWFNGKPESMANSTYMLAPADWLAGDVHNTIP 151 QQTA PLA + V +LPGL+ I AG + G+PE++A TY AP WL GD IP Sbjct 92 RTQQTAQPLADLSREPVTVLPGLREIEAGIYEGQPEALAGFTYYEAPTRWLQGDRTARIP 151 Query 152 GSISGTEFNSQFSAAVRKIYDSGHNTPVVFSQGVAIMIWTLMNARNSRDSLLTTHPLPNI 211 GSI G EF+++F AVR+IYDS PV FS AIM W MN N LL+ HPL N Sbjct 152 GSIDGDEFDARFDEAVREIYDSEDTDPVAFSHAGAIMTWVAMNVDNPDLGLLSRHPLGNT 211 Query 212 GRVVITGNPVTGWRLVEWDGI 232 G V+ GNP GW LV+W GI Sbjct 212 GHAVVKGNPTGGWTLVDWGGI 232 >gi|108802104|ref|YP_642301.1| phosphoglycerate mutase [Mycobacterium sp. MCS] gi|108772523|gb|ABG11245.1| Phosphoglycerate mutase [Mycobacterium sp. MCS] Length=259 Score = 188 bits (478), Expect = 5e-46, Method: Compositional matrix adjust. Identities = 98/198 (50%), Positives = 133/198 (68%), Gaps = 1/198 (0%) Query 34 SITLTFIRNAQSQANADGIIDTDMPGSGLSADGKAEAQQVAHQVSRRDVDSIYSSPMAAD 93 ITLTF+R+AQS+ NA G+IDT PG ++ G+ +A + A ++ D D +Y+S M Sbjct 58 EITLTFVRHAQSEGNASGLIDTSTPGPSITELGRTQAAESAAALAGNDYDGVYASTMVRT 117 Query 94 QQTAGPLAGELGKQVEILPGLQAINAGWFNGKPESMANSTYMLAPADWLAGDVHNTIPGS 153 QQTA P+A L + V +LPGL+ + AG F G+PE+ A + Y APA WL+GD IPGS Sbjct 118 QQTAAPMAAALAEPVVVLPGLREVEAGQFEGRPEASA-ADYFDAPAQWLSGDRAARIPGS 176 Query 154 ISGTEFNSQFSAAVRKIYDSGHNTPVVFSQGVAIMIWTLMNARNSRDSLLTTHPLPNIGR 213 I G EF+++F A+V++IYDSG V +S G AIM+W MN NS LL HPLPN GR Sbjct 177 IDGNEFDARFDASVQQIYDSGDVNAVAYSHGAAIMLWVTMNVDNSHPELLRQHPLPNTGR 236 Query 214 VVITGNPVTGWRLVEWDG 231 VV+TG+P GW L++W+G Sbjct 237 VVVTGSPTAGWTLIDWNG 254 >gi|126438085|ref|YP_001073776.1| phosphoglycerate mutase [Mycobacterium sp. JLS] gi|126237885|gb|ABO01286.1| Phosphoglycerate mutase [Mycobacterium sp. JLS] Length=231 Score = 188 bits (477), Expect = 6e-46, Method: Compositional matrix adjust. Identities = 98/198 (50%), Positives = 133/198 (68%), Gaps = 1/198 (0%) Query 34 SITLTFIRNAQSQANADGIIDTDMPGSGLSADGKAEAQQVAHQVSRRDVDSIYSSPMAAD 93 ITLTF+R+AQS+ NA G+IDT PG ++ G+ +A + A ++ D D +Y+S M Sbjct 30 EITLTFVRHAQSEGNASGLIDTSTPGPSITELGRTQAAESAAALAGNDYDGVYASTMVRT 89 Query 94 QQTAGPLAGELGKQVEILPGLQAINAGWFNGKPESMANSTYMLAPADWLAGDVHNTIPGS 153 QQTA P+A L + V +LPGL+ + AG F G+PE+ A + Y APA WL+GD IPGS Sbjct 90 QQTAAPMAAALAEPVVVLPGLREVEAGQFEGRPEASA-ADYFDAPAQWLSGDRAARIPGS 148 Query 154 ISGTEFNSQFSAAVRKIYDSGHNTPVVFSQGVAIMIWTLMNARNSRDSLLTTHPLPNIGR 213 I G EF+++F A+V++IYDSG V +S G AIM+W MN NS LL HPLPN GR Sbjct 149 IDGNEFDARFDASVQQIYDSGDVNAVAYSHGAAIMLWVTMNVDNSHPELLREHPLPNTGR 208 Query 214 VVITGNPVTGWRLVEWDG 231 VV+TG+P GW L++W+G Sbjct 209 VVVTGSPTAGWTLIDWNG 226 >gi|119871257|ref|YP_941209.1| phosphoglycerate mutase [Mycobacterium sp. KMS] gi|119697346|gb|ABL94419.1| Phosphoglycerate mutase [Mycobacterium sp. KMS] Length=231 Score = 188 bits (477), Expect = 7e-46, Method: Compositional matrix adjust. Identities = 98/198 (50%), Positives = 133/198 (68%), Gaps = 1/198 (0%) Query 34 SITLTFIRNAQSQANADGIIDTDMPGSGLSADGKAEAQQVAHQVSRRDVDSIYSSPMAAD 93 ITLTF+R+AQS+ NA G+IDT PG ++ G+ +A + A ++ D D +Y+S M Sbjct 30 EITLTFVRHAQSEGNASGLIDTSTPGPSITELGRTQAAESAAALAGNDYDGVYASTMVRT 89 Query 94 QQTAGPLAGELGKQVEILPGLQAINAGWFNGKPESMANSTYMLAPADWLAGDVHNTIPGS 153 QQTA P+A L + V +LPGL+ + AG F G+PE+ A + Y APA WL+GD IPGS Sbjct 90 QQTAAPMAAALAEPVVVLPGLREVEAGQFEGRPEASA-ADYFDAPAQWLSGDRAARIPGS 148 Query 154 ISGTEFNSQFSAAVRKIYDSGHNTPVVFSQGVAIMIWTLMNARNSRDSLLTTHPLPNIGR 213 I G EF+++F A+V++IYDSG V +S G AIM+W MN NS LL HPLPN GR Sbjct 149 IDGNEFDARFDASVQQIYDSGDVNAVAYSHGAAIMLWVTMNVDNSHPELLRQHPLPNTGR 208 Query 214 VVITGNPVTGWRLVEWDG 231 VV+TG+P GW L++W+G Sbjct 209 VVVTGSPTAGWTLIDWNG 226 >gi|296169349|ref|ZP_06850974.1| possible LpqD protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295895971|gb|EFG75661.1| possible LpqD protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length=188 Score = 168 bits (426), Expect = 6e-40, Method: Compositional matrix adjust. Identities = 77/128 (61%), Positives = 101/128 (79%), Gaps = 0/128 (0%) Query 7 VRKACTVLAVLAATLLLGACGGPTQPRSITLTFIRNAQSQANADGIIDTDMPGSGLSADG 66 +RKA +AVLAAT+++GACGG Q SIT+TF+R+A+S+ NA G+IDTD+PG GL+ +G Sbjct 7 IRKASKAVAVLAATVIVGACGGSPQAHSITVTFVRHAESETNASGVIDTDVPGPGLTPEG 66 Query 67 KAEAQQVAHQVSRRDVDSIYSSPMAADQQTAGPLAGELGKQVEILPGLQAINAGWFNGKP 126 K +A+QVAHQ++ D++Y+S M QQTA PLA ELGKQVE+L G+Q INAGW+ GKP Sbjct 67 KGQAEQVAHQLAHNKYDAVYASTMVRTQQTAAPLAAELGKQVEVLQGIQEINAGWYEGKP 126 Query 127 ESMANSTY 134 SMA STY Sbjct 127 VSMAPSTY 134 >gi|326382213|ref|ZP_08203905.1| phosphoglycerate mutase family protein [Gordonia neofelifaecis NRRL B-59395] gi|326198943|gb|EGD56125.1| phosphoglycerate mutase family protein [Gordonia neofelifaecis NRRL B-59395] Length=261 Score = 165 bits (417), Expect = 5e-39, Method: Compositional matrix adjust. Identities = 84/204 (42%), Positives = 123/204 (61%), Gaps = 4/204 (1%) Query 29 PTQPRSITLTFIRNAQSQANADGIIDTDMPGSGLSADGKAEAQQVAHQVSRRDVDSIYSS 88 PT P +T+T +R+A+S+ NA G+IDT PG L+ G+ +AQQ A ++ D +++S Sbjct 31 PTAP-ELTITLVRHAESEGNASGLIDTKTPGPDLTELGRTQAQQNAILLAGNRYDGVFAS 89 Query 89 PMAADQQTAGPLAGELGKQVEILPGLQAINAGWFNGKPESMANSTYMLAPADWLAGDVHN 148 M QQTA PLA +L + V + PG I AG + G+PE+ A Y AP W+ G++ Sbjct 90 RMVRTQQTARPLAQKLFRPVVVEPGFHEILAGDYEGQPEATAQMNYFQAPTQWMRGNLDA 149 Query 149 TIPGSISGTEFNSQFSAAVRKIYDSGHNTPVVFSQGVAIMIWTLMNARNSRD---SLLTT 205 IPG+ G EF +F+ ++ + +G PV+FS G IM W++M A N+ + L Sbjct 150 RIPGAEDGHEFKKRFNDSLAAVVRTGVQNPVIFSHGGTIMTWSIMTATNAAEYAGKLAAG 209 Query 206 HPLPNIGRVVITGNPVTGWRLVEW 229 L N+GRVV+ GNP TGWR+VEW Sbjct 210 EHLRNVGRVVLKGNPTTGWRIVEW 233 >gi|120406210|ref|YP_956039.1| phosphoglycerate mutase [Mycobacterium vanbaalenii PYR-1] gi|119959028|gb|ABM16033.1| Phosphoglycerate mutase [Mycobacterium vanbaalenii PYR-1] Length=421 Score = 162 bits (410), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 93/202 (47%), Positives = 122/202 (61%), Gaps = 4/202 (1%) Query 35 ITLTFIRNAQSQANADGIIDTDMPGSGLSADGKAEAQQVAHQVSRRDVDSIYSSPMAADQ 94 I LTF+R+ QSQANADGII+T++PG ++A G+ +A VA ++ IY+S M Q Sbjct 35 IVLTFVRHGQSQANADGIINTEVPGPHITALGQQQAALVAGVLAAGGYQGIYASDMVRTQ 94 Query 95 QTAGPLAGELGKQVEILPGLQAINAGWFNGKPES--MANSTYMLAPADWLAGDVHNTIPG 152 +TA PLA LG+ V +LPGL+ I+AG + G E+ + Y L PA W G IP Sbjct 95 ETAAPLADILGESVTVLPGLREIDAGIYEGSSETDGLGRLGYGLTPALWTLGLRSAWIPD 154 Query 153 S--ISGTEFNSQFSAAVRKIYDSGHNTPVVFSQGVAIMIWTLMNARNSRDSLLTTHPLPN 210 S +G F+ + S AV+ IY+ G PV FS G IM WT+MN N LL +H LPN Sbjct 155 STDTNGNVFSDRMSEAVQIIYEDGWARPVAFSHGATIMFWTMMNVDNPDLGLLLSHQLPN 214 Query 211 IGRVVITGNPVTGWRLVEWDGI 232 G VV+ GNP GW LV WDG+ Sbjct 215 TGVVVLEGNPEDGWTLVSWDGV 236 >gi|312138801|ref|YP_004006137.1| phosphoglycerate mutase family protein [Rhodococcus equi 103S] gi|325676499|ref|ZP_08156177.1| phosphoglycerate mutase [Rhodococcus equi ATCC 33707] gi|311888140|emb|CBH47452.1| putative secreted phosphoglycerate mutase family protein [Rhodococcus equi 103S] gi|325552677|gb|EGD22361.1| phosphoglycerate mutase [Rhodococcus equi ATCC 33707] Length=258 Score = 159 bits (403), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 78/197 (40%), Positives = 118/197 (60%), Gaps = 0/197 (0%) Query 35 ITLTFIRNAQSQANADGIIDTDMPGSGLSADGKAEAQQVAHQVSRRDVDSIYSSPMAADQ 94 + +T +R+A+S N G++DT +PG L+ G+ +A +A Q++ ++ D ++S M Sbjct 57 MVITLVRHAESAGNLSGLVDTKVPGPDLTPRGRTQADNLAVQLADQNFDCGFASNMVRTA 116 Query 95 QTAGPLAGELGKQVEILPGLQAINAGWFNGKPESMANSTYMLAPADWLAGDVHNTIPGSI 154 QTA P E ++I PG + I AG + G PE+ A S Y+ AP WL+GD++ IPGSI Sbjct 117 QTAAPTVAEHDLSLDIQPGFREIEAGDYEGTPEAEALSGYLQAPIKWLSGDLNARIPGSI 176 Query 155 SGTEFNSQFSAAVRKIYDSGHNTPVVFSQGVAIMIWTLMNARNSRDSLLTTHPLPNIGRV 214 G EF+ +F A+ + G PV+FS G IM W++MNA N+ S L T P+ N G V Sbjct 177 DGNEFDDRFDEALLDVQRRGCTNPVIFSHGGTIMFWSMMNADNADMSKLGTDPMRNGGHV 236 Query 215 VITGNPVTGWRLVEWDG 231 + G+P GW +V+W G Sbjct 237 TLEGSPQKGWTIVDWVG 253 >gi|326381982|ref|ZP_08203675.1| phosphoglycerate mutase family protein [Gordonia neofelifaecis NRRL B-59395] gi|326199408|gb|EGD56589.1| phosphoglycerate mutase family protein [Gordonia neofelifaecis NRRL B-59395] Length=230 Score = 156 bits (394), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 82/201 (41%), Positives = 120/201 (60%), Gaps = 0/201 (0%) Query 31 QPRSITLTFIRNAQSQANADGIIDTDMPGSGLSADGKAEAQQVAHQVSRRDVDSIYSSPM 90 Q + LTF+R+ +S NA G++D+ +PG L+A G+A+A VA ++ R D +Y+S M Sbjct 26 QTGEMFLTFVRHGESAGNASGLVDSSVPGPHLTAKGQAQAAAVAQLLADRKFDGVYASTM 85 Query 91 AADQQTAGPLAGELGKQVEILPGLQAINAGWFNGKPESMANSTYMLAPADWLAGDVHNTI 150 Q+TA P + V + PG++ I AG + G PE A +TY AP W+ + I Sbjct 86 IRTQETAAPTSALRHLPVVVEPGVREIEAGDYEGTPEKDALATYFQAPLQWMQRNFAPRI 145 Query 151 PGSISGTEFNSQFSAAVRKIYDSGHNTPVVFSQGVAIMIWTLMNARNSRDSLLTTHPLPN 210 PGSI G EF ++ +AA++ I + G PVVFS G AIM+W + N L+ + PL N Sbjct 146 PGSIDGYEFMNRMNAAIKDIQNRGSKRPVVFSHGGAIMVWVMAAVSNPNLGLMKSDPLNN 205 Query 211 IGRVVITGNPVTGWRLVEWDG 231 G VV+ G+P GW+L+EWDG Sbjct 206 TGHVVVKGSPEKGWKLIEWDG 226 >gi|145225155|ref|YP_001135833.1| phosphoglycerate mutase [Mycobacterium gilvum PYR-GCK] gi|315445522|ref|YP_004078401.1| fructose-2,6-bisphosphatase [Mycobacterium sp. Spyr1] gi|145217641|gb|ABP47045.1| Phosphoglycerate mutase [Mycobacterium gilvum PYR-GCK] gi|315263825|gb|ADU00567.1| fructose-2,6-bisphosphatase [Mycobacterium sp. Spyr1] Length=443 Score = 149 bits (376), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 89/233 (39%), Positives = 127/233 (55%), Gaps = 9/233 (3%) Query 6 PVRKACTV----LAVLAATLLLGACGGPTQPRSITLTFIRNAQSQANADGIIDTDMPGSG 61 P + C V +A L+A LL+ P+ ++TLTF+R+A+S AN GIIDT +PG G Sbjct 2 PDPRTCRVRRILIAALSAVLLVLVSAIPSW--AMTLTFVRHAESLANEAGIIDTRVPGPG 59 Query 62 LSADGKAEAQQVAHQVSRRDVDSIYSSPMAADQQTAGPLAGEL-GKQVEILPGLQAINAG 120 LS G+ +A+ +A ++ D IY S M Q TA P+ L G ++LPGL+ I+AG Sbjct 60 LSEAGELQARAIAPVLAGMGFDGIYVSSMLRTQLTAQPMLDLLPGSSYQVLPGLREISAG 119 Query 121 WFNGKPES--MANSTYMLAPADWLAGDVHNTIPGSISGTEFNSQFSAAVRKIYDSGHNTP 178 F G E+ + Y LAP W+ G +PG G F+++ A+ +I D+G Sbjct 120 IFEGSSENEGLGRLGYALAPVTWMLGARFVPVPGGEDGNAFDARVDGAIAEIADNGDENA 179 Query 179 VVFSQGVAIMIWTLMNARNSRDSLLTTHPLPNIGRVVITGNPVTGWRLVEWDG 231 V F+ G IM W +MN N L+ H L N+ VV+ G+P GW LV W G Sbjct 180 VAFAHGATIMFWVMMNVDNPDLLLMLRHQLDNVESVVVEGSPEEGWTLVSWAG 232 >gi|118463647|ref|YP_883905.1| pe_pgrs family protein [Mycobacterium avium 104] gi|118164934|gb|ABK65831.1| pe_pgrs family protein [Mycobacterium avium 104] Length=313 Score = 147 bits (372), Expect = 9e-34, Method: Compositional matrix adjust. Identities = 99/262 (38%), Positives = 138/262 (53%), Gaps = 36/262 (13%) Query 4 RTPVRKACTVLAVLAATLLLGACGGPTQPRSITLTFIRNAQSQANADGIIDTDMPGSGLS 63 RTP+ +A VLA + LL A + SI + +R+ QS ANA G+IDT +PG+ L+ Sbjct 3 RTPLCRAGAVLA--SVVLLCSASATASADESIVIDLVRHGQSVANAAGLIDTAVPGASLT 60 Query 64 ADGKAEAQQVAHQVSRRD-VDSIYSSPMAADQQTAGPLAGELGKQVEILPGLQAINAGWF 122 G+ +AQ VA ++ R V +I++S + QQTA PLA LG V++LPGL I+AG F Sbjct 61 QLGQQQAQTVAGVLAARGPVAAIFASQLIRTQQTAAPLASALGMNVQVLPGLNEIDAGIF 120 Query 123 NGKPE-SMANSTYMLAPADWLAG--DVHNTIPGSI--SGTEFNSQFSAAVRKIYDS---- 173 NG+P+ S+ Y+LAP W+ G V PGS +G EF +F A++ +Y S Sbjct 121 NGQPQFSLGGLAYLLAPIAWMLGLRIVPMLAPGSADANGYEFRRRFDGALQTVYGSAAAS 180 Query 174 ------------------------GHNTPVVFSQGVAIMIWTLMNARNSRDSLLTTHPLP 209 G T V FS AI + T+M +N +L PLP Sbjct 181 AGGFGDVLQAVYAGAVTNPVRAANGRITGVAFSSEFAIGVGTMMTVKNPDPLVLLFDPLP 240 Query 210 NIGRVVITGNPVTGWRLVEWDG 231 N G VVI G+P GW L+ W+G Sbjct 241 NTGIVVIQGSPRDGWTLISWNG 262 >gi|254821911|ref|ZP_05226912.1| pe_pgrs family protein [Mycobacterium intracellulare ATCC 13950] Length=293 Score = 141 bits (356), Expect = 8e-32, Method: Compositional matrix adjust. Identities = 97/250 (39%), Positives = 132/250 (53%), Gaps = 34/250 (13%) Query 16 VLAATLLLGACGGPTQPRSITLTFIRNAQSQANADGIIDTDMPGSGLSADGKAEAQQVAH 75 +L+A LL A + SI + +R+ QS ANA +IDT +PG+ L+A G+ +AQ VA+ Sbjct 2 LLSAVLLCLASARASADESIVIDLVRHGQSVANAARVIDTAVPGAALTALGQQQAQDVAN 61 Query 76 QVSRRD-VDSIYSSPMAADQQTAGPLAGELGKQVEILPGLQAINAGWFNGKPE-SMANST 133 ++ + V +I++S + QQTA PLA LG V++LPGL I+AG FNG P+ S+A Sbjct 62 VLAAKGPVAAIFASQLIRTQQTAAPLAAALGMNVQVLPGLNEIDAGIFNGMPQFSLAGLA 121 Query 134 YMLAPADWLAG--DVHNTIPGSI--SGTEFNSQFSAAVR------------------KIY 171 Y+LAP WL G V PGS +G EF+ +FS A++ ++Y Sbjct 122 YLLAPVAWLLGLRVVPMLAPGSADPNGYEFHRRFSGALQTMSGNAATTASGFNDMLARMY 181 Query 172 DSGHNTP----------VVFSQGVAIMIWTLMNARNSRDSLLTTHPLPNIGRVVITGNPV 221 S P V FS I I T+ RN LL PLPN G V I GNP Sbjct 182 GSALANPVRASDGRIREVAFSSEFDIGIGTMTTVRNPEQLLLLFDPLPNTGIVEIQGNPH 241 Query 222 TGWRLVEWDG 231 GW LV W+G Sbjct 242 DGWTLVSWNG 251 >gi|296141329|ref|YP_003648572.1| phosphoglycerate mutase [Tsukamurella paurometabola DSM 20162] gi|296029463|gb|ADG80233.1| Phosphoglycerate mutase [Tsukamurella paurometabola DSM 20162] Length=374 Score = 139 bits (349), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 88/241 (37%), Positives = 131/241 (55%), Gaps = 11/241 (4%) Query 2 AKRTPVRKACTVLAVLAATLLLGACGGPT-QPRSITLTFIRNAQSQANADGII-----DT 55 A++ +++ + LA A L L P R + +TF+R+AQS+ANA G + D+ Sbjct 3 AQKYGIQRTRSALAAGLAVLFLIVGAFPAWAARDVVITFVRHAQSEANAGGFLGKGVHDS 62 Query 56 DMPGSGLSADGKAEAQQVAHQVSRRDVDSIYSSPMAADQQTAGPLAGELGKQVEILPGLQ 115 + PG G++A G+ +A V ++ VD I++S +A +TA PLA G VE+LPGL+ Sbjct 63 EAPGPGITATGREQAAAVVDSLAAVGVDRIFASNLARTWETARPLAKRTGLAVEVLPGLR 122 Query 116 AINAGWFNGKPESMANSTYMLAPADWLAGDVHNTIPG---SISGTEFNSQFSAAVRKIYD 172 I+AG G + M PA W G +PG +G F + + A++ IYD Sbjct 123 EISAGPAQGHSIISPATVVMAIPALWTVGLRAVPMPGGDYDANGRAFERRVNGAIQTIYD 182 Query 173 SGHNTPVVFSQGVAIMIWTLMNARN-SRDSLLTTHPLPNIGRVVITGNPVTGWRLVEWDG 231 SG PV F+ G ++IWTLMN +N S ++LT P N G V ++GNP GW L W G Sbjct 183 SGAQHPVAFTHGGTMLIWTLMNVKNPSLFTVLTNFP-KNTGTVTVSGNPEDGWVLESWMG 241 Query 232 I 232 + Sbjct 242 V 242 >gi|254777216|ref|ZP_05218732.1| pe_pgrs family protein [Mycobacterium avium subsp. avium ATCC 25291] Length=313 Score = 138 bits (347), Expect = 8e-31, Method: Compositional matrix adjust. Identities = 100/262 (39%), Positives = 138/262 (53%), Gaps = 36/262 (13%) Query 4 RTPVRKACTVLAVLAATLLLGACGGPTQPRSITLTFIRNAQSQANADGIIDTDMPGSGLS 63 RTP+ +A VLA + LL A + SI + +R+ QS ANA G+IDT +PG+ L+ Sbjct 3 RTPLCRAGAVLA--SVVLLCSASATASADESIVIDLVRHGQSVANAAGLIDTAVPGASLT 60 Query 64 ADGKAEAQQVAHQVSRRD-VDSIYSSPMAADQQTAGPLAGELGKQVEILPGLQAINAGWF 122 G+ +AQ VA ++ R V +I++S + QQTA PLA LG V++LPGL I+AG F Sbjct 61 QLGQQQAQTVAGVLAARGPVAAIFASQLIRTQQTAAPLASALGMNVQVLPGLNEIDAGIF 120 Query 123 NGKPE-SMANSTYMLAPADWLAG--DVHNTIPGSI--SGTEFNSQFSAAVRKIYDS---- 173 NG+P+ S+ Y+LAP W+ G V PGS +G EF +F A++ +Y S Sbjct 121 NGQPQFSLGGLAYLLAPIAWMLGLRIVPMLAPGSADANGYEFRRRFDGALQTVYGSAAAS 180 Query 174 ------------------------GHNTPVVFSQGVAIMIWTLMNARNSRDSLLTTHPLP 209 G T V FS AI + T+M +N LL PLP Sbjct 181 AGGFGDVLQAVYAGAVTNPVRAANGRITGVAFSSEFAIGVGTMMTVKNPDPLLLLFDPLP 240 Query 210 NIGRVVITGNPVTGWRLVEWDG 231 N G VVI G+P GW L+ W+G Sbjct 241 NTGIVVIQGSPRDGWTLISWNG 262 >gi|342859131|ref|ZP_08715785.1| pe_pgrs family protein [Mycobacterium colombiense CECT 3035] gi|342133372|gb|EGT86575.1| pe_pgrs family protein [Mycobacterium colombiense CECT 3035] Length=311 Score = 138 bits (347), Expect = 8e-31, Method: Compositional matrix adjust. Identities = 99/260 (39%), Positives = 133/260 (52%), Gaps = 36/260 (13%) Query 6 PVRKACTVLAVLAATLLLGACGGPTQPRSITLTFIRNAQSQANADGIIDTDMPGSGLSAD 65 P+R VL L+ LL A SI + +R+ QS ANA +IDT PG+ L+A Sbjct 5 PLRPVGAVL--LSIVLLCTASATAAADESIVIDLVRHGQSTANAASLIDTAPPGASLTAL 62 Query 66 GKAEAQQVAHQVSRRD-VDSIYSSPMAADQQTAGPLAGELGKQVEILPGLQAINAGWFNG 124 G+ +A+ VA ++ + V +I++S + QQTA PLA LG V+++PGL I+AG FNG Sbjct 63 GQQQARTVAGVLAAKGPVAAIFASQLIRTQQTAAPLAAALGMNVQVMPGLNEIDAGVFNG 122 Query 125 KPE-SMANSTYMLAPADWLAG--DVHNTIPGSI--SGTEFNSQFSAAVRKIYD------S 173 P+ S+A Y+LAP W+ G V PGS +G EF+ +F A++ +Y S Sbjct 123 MPQISLAGLAYLLAPVAWMLGLRIVPMLAPGSADPNGYEFHKRFDGALQTMYGNAATSAS 182 Query 174 GHN----------------------TPVVFSQGVAIMIWTLMNARNSRDSLLTTHPLPNI 211 G N T V FS I I T+M RN LL PLPN Sbjct 183 GFNGMLTTMYGSALANPVRAADGRITEVAFSSEFDIGIGTMMTVRNPIQLLLLFDPLPNG 242 Query 212 GRVVITGNPVTGWRLVEWDG 231 G V I GNP GW LV W+G Sbjct 243 GIVEIEGNPHDGWTLVSWNG 262 >gi|41409966|ref|NP_962802.1| hypothetical protein MAP3868 [Mycobacterium avium subsp. paratuberculosis K-10] gi|41398799|gb|AAS06418.1| hypothetical protein MAP_3868 [Mycobacterium avium subsp. paratuberculosis K-10] Length=313 Score = 137 bits (345), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 100/262 (39%), Positives = 138/262 (53%), Gaps = 36/262 (13%) Query 4 RTPVRKACTVLAVLAATLLLGACGGPTQPRSITLTFIRNAQSQANADGIIDTDMPGSGLS 63 RTP+ +A VLA + LL A + SI + +R+ QS ANA G+IDT +PG+ L+ Sbjct 3 RTPLCRAGAVLA--SVVLLCSASATASADESIVIDLVRHGQSVANAAGLIDTAVPGASLT 60 Query 64 ADGKAEAQQVAHQVSRRD-VDSIYSSPMAADQQTAGPLAGELGKQVEILPGLQAINAGWF 122 G+ +AQ VA ++ R V +I++S + QQTA PLA LG V++LPGL I+AG F Sbjct 61 QLGQQQAQTVAGVLAARGPVAAIFASQLIRTQQTAAPLATALGMNVQVLPGLNEIDAGIF 120 Query 123 NGKPE-SMANSTYMLAPADWLAG--DVHNTIPGSI--SGTEFNSQFSAAVRKIYDS---- 173 NG+P+ S+ Y+LAP W+ G V PGS +G EF +F A++ +Y S Sbjct 121 NGQPQFSLGGLAYLLAPIAWMLGLRIVPMLAPGSADANGYEFRRRFDGALQTVYGSAAAN 180 Query 174 ------------------------GHNTPVVFSQGVAIMIWTLMNARNSRDSLLTTHPLP 209 G T V FS AI + T+M +N LL PLP Sbjct 181 AGGFGDVLQAVYAGAVTNPVRAANGRITGVAFSSEFAIGVGTMMTVKNPDPLLLLFDPLP 240 Query 210 NIGRVVITGNPVTGWRLVEWDG 231 N G VVI G+P GW L+ W+G Sbjct 241 NTGIVVIQGSPRDGWTLISWNG 262 >gi|308372941|ref|ZP_07430459.2| PE-PGRS family protein [Mycobacterium tuberculosis SUMu005] gi|308397077|ref|ZP_07492381.2| putative phosphoglycerate mutase family protein [Mycobacterium tuberculosis SUMu012] gi|308339303|gb|EFP28154.1| PE-PGRS family protein [Mycobacterium tuberculosis SUMu005] gi|308367016|gb|EFP55867.1| putative phosphoglycerate mutase family protein [Mycobacterium tuberculosis SUMu012] Length=314 Score = 131 bits (329), Expect = 9e-29, Method: Compositional matrix adjust. Identities = 90/226 (40%), Positives = 124/226 (55%), Gaps = 16/226 (7%) Query 23 LGACGGPTQPRSITLTFIRNAQSQANADGIIDTDMPGSGLSADGKAEAQQVAHQVSRR-D 81 + GG +SI + F+R+ Q+ NA +IDT +PG GL+A G+ +AQ +A+ ++ + Sbjct 1 MATIGGGGNGQSIVIDFVRHGQTPGNAAMLIDTAVPGPGLTALGQQQAQAIANALAAKGP 60 Query 82 VDSIYSSPMAADQQTAGPLAGELGKQVEILPGLQAINAGWFNGKPE-SMANSTYMLAPAD 140 I+ S + QQTA PLA LG ++LPGL I+AG F P+ S A Y++ P Sbjct 61 YAGIFDSQLIRTQQTAAPLANLLGMAPQVLPGLNEIHAGIFEDLPQISPAGLLYLVGPIA 120 Query 141 WLAGD--VHNTIPGS--ISGTEFNSQFSAAVRKIYDSGHNTPVV----------FSQGVA 186 W G V PGS ++G FN F+ AV+ IYD+ PVV +S Sbjct 121 WTLGFPIVPMLAPGSTDVNGIVFNRAFTGAVQTIYDASLANPVVAADGNITSVAYSSAFT 180 Query 187 IMIWTLMNARNSRDSLLTTHPLPNIGRVVITGNPVTGWRLVEWDGI 232 I + T+MN N LL THP+PN G VV+ GNP GW LV WDGI Sbjct 181 IGVGTMMNVDNPHPLLLLTHPVPNTGAVVVQGNPEGGWTLVSWDGI 226 >gi|294993212|ref|ZP_06798903.1| PE-PGRS family protein [Mycobacterium tuberculosis 210] Length=581 Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 88/216 (41%), Positives = 121/216 (57%), Gaps = 16/216 (7%) Query 33 RSITLTFIRNAQSQANADGIIDTDMPGSGLSADGKAEAQQVAHQVSRRD-VDSIYSSPMA 91 +SI + F+R+ Q+ NA +IDT +PG GL+A G+ +AQ +A+ ++ + I+ S + Sbjct 278 QSIVIDFVRHGQTPGNAAMLIDTAVPGPGLTALGQQQAQAIANALAAKGPYAGIFDSQLI 337 Query 92 ADQQTAGPLAGELGKQVEILPGLQAINAGWFNGKPE-SMANSTYMLAPADWLAGD--VHN 148 QQTA PLA LG ++LPGL I+AG F P+ S A Y++ P W G V Sbjct 338 RTQQTAAPLANLLGMAPQVLPGLNEIHAGIFEDLPQISPAGLLYLVGPIAWTLGFPIVPM 397 Query 149 TIPGS--ISGTEFNSQFSAAVRKIYDSGHNTPVV----------FSQGVAIMIWTLMNAR 196 PGS ++G FN F+ AV+ IYD+ PVV +S I + T+MN Sbjct 398 LAPGSTDVNGIVFNEPFTGAVQTIYDASLANPVVAADGNITSVAYSSAFTIGVGTMMNVD 457 Query 197 NSRDSLLTTHPLPNIGRVVITGNPVTGWRLVEWDGI 232 N LL THP+PN G VV+ GNP GW LV WDGI Sbjct 458 NPHPLLLLTHPVPNTGAVVVQGNPEGGWTLVSWDGI 493 >gi|289573372|ref|ZP_06453599.1| pe-pgrs family protein [Mycobacterium tuberculosis K85] gi|289537803|gb|EFD42381.1| pe-pgrs family protein [Mycobacterium tuberculosis K85] Length=580 Score = 130 bits (328), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 88/216 (41%), Positives = 121/216 (57%), Gaps = 16/216 (7%) Query 33 RSITLTFIRNAQSQANADGIIDTDMPGSGLSADGKAEAQQVAHQVSRRD-VDSIYSSPMA 91 +SI + F+R+ Q+ NA +IDT +PG GL+A G+ +AQ +A+ ++ + I+ S + Sbjct 277 QSIVIDFVRHGQTPGNAAMLIDTAVPGPGLTALGQQQAQAIANALAAKGPYAGIFDSQLI 336 Query 92 ADQQTAGPLAGELGKQVEILPGLQAINAGWFNGKPE-SMANSTYMLAPADWLAGD--VHN 148 QQTA PLA LG ++LPGL I+AG F P+ S A Y++ P W G V Sbjct 337 RTQQTAAPLANLLGMAPQVLPGLNEIHAGIFEDLPQISPAGLLYLVGPIAWTLGFPIVPM 396 Query 149 TIPGS--ISGTEFNSQFSAAVRKIYDSGHNTPVV----------FSQGVAIMIWTLMNAR 196 PGS ++G FN F+ AV+ IYD+ PVV +S I + T+MN Sbjct 397 LAPGSTDVNGIVFNRAFTGAVQTIYDASLANPVVAADGNITSVAYSSAFTIGVGTMMNVD 456 Query 197 NSRDSLLTTHPLPNIGRVVITGNPVTGWRLVEWDGI 232 N LL THP+PN G VV+ GNP GW LV WDGI Sbjct 457 NPHPLLLLTHPVPNTGAVVVQGNPEGGWTLVSWDGI 492 >gi|148660530|ref|YP_001282053.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra] gi|148504682|gb|ABQ72491.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra] gi|339293776|gb|AEJ45887.1| PE-PGRS family protein [Mycobacterium tuberculosis CCDC5079] gi|339297416|gb|AEJ49526.1| PE-PGRS family protein [Mycobacterium tuberculosis CCDC5180] Length=581 Score = 130 bits (328), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 88/216 (41%), Positives = 121/216 (57%), Gaps = 16/216 (7%) Query 33 RSITLTFIRNAQSQANADGIIDTDMPGSGLSADGKAEAQQVAHQVSRRD-VDSIYSSPMA 91 +SI + F+R+ Q+ NA +IDT +PG GL+A G+ +AQ +A+ ++ + I+ S + Sbjct 278 QSIVIDFVRHGQTPGNAAMLIDTAVPGPGLTALGQQQAQAIANALAAKGPYAGIFDSQLI 337 Query 92 ADQQTAGPLAGELGKQVEILPGLQAINAGWFNGKPE-SMANSTYMLAPADWLAGD--VHN 148 QQTA PLA LG ++LPGL I+AG F P+ S A Y++ P W G V Sbjct 338 RTQQTAAPLANLLGMAPQVLPGLNEIHAGIFEDLPQISPAGLLYLVGPIAWTLGFPIVPM 397 Query 149 TIPGS--ISGTEFNSQFSAAVRKIYDSGHNTPVV----------FSQGVAIMIWTLMNAR 196 PGS ++G FN F+ AV+ IYD+ PVV +S I + T+MN Sbjct 398 LAPGSTDVNGIVFNRAFTGAVQTIYDASLANPVVAADGNITSVAYSSAFTIGVGTMMNVD 457 Query 197 NSRDSLLTTHPLPNIGRVVITGNPVTGWRLVEWDGI 232 N LL THP+PN G VV+ GNP GW LV WDGI Sbjct 458 NPHPLLLLTHPVPNTGAVVVQGNPEGGWTLVSWDGI 493 >gi|15840168|ref|NP_335205.1| PE_PGRS family protein [Mycobacterium tuberculosis CDC1551] gi|13880321|gb|AAK45019.1| PE_PGRS family protein [Mycobacterium tuberculosis CDC1551] gi|323720784|gb|EGB29854.1| PE-PGRS family protein [Mycobacterium tuberculosis CDC1551A] Length=584 Score = 130 bits (328), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 88/216 (41%), Positives = 121/216 (57%), Gaps = 16/216 (7%) Query 33 RSITLTFIRNAQSQANADGIIDTDMPGSGLSADGKAEAQQVAHQVSRRD-VDSIYSSPMA 91 +SI + F+R+ Q+ NA +IDT +PG GL+A G+ +AQ +A+ ++ + I+ S + Sbjct 281 QSIVIDFVRHGQTPGNAAMLIDTAVPGPGLTALGQQQAQAIANALAAKGPYAGIFDSQLI 340 Query 92 ADQQTAGPLAGELGKQVEILPGLQAINAGWFNGKPE-SMANSTYMLAPADWLAGD--VHN 148 QQTA PLA LG ++LPGL I+AG F P+ S A Y++ P W G V Sbjct 341 RTQQTAAPLANLLGMAPQVLPGLNEIHAGIFEDLPQISPAGLLYLVGPIAWTLGFPIVPM 400 Query 149 TIPGS--ISGTEFNSQFSAAVRKIYDSGHNTPVV----------FSQGVAIMIWTLMNAR 196 PGS ++G FN F+ AV+ IYD+ PVV +S I + T+MN Sbjct 401 LAPGSTDVNGIVFNRAFTGAVQTIYDASLANPVVAADGNITSVAYSSAFTIGVGTMMNVD 460 Query 197 NSRDSLLTTHPLPNIGRVVITGNPVTGWRLVEWDGI 232 N LL THP+PN G VV+ GNP GW LV WDGI Sbjct 461 NPHPLLLLTHPVPNTGAVVVQGNPEGGWTLVSWDGI 496 >gi|289442156|ref|ZP_06431900.1| PE-PGRS family protein [Mycobacterium tuberculosis T46] gi|289568705|ref|ZP_06448932.1| PE-PGRS family protein [Mycobacterium tuberculosis T17] gi|289749263|ref|ZP_06508641.1| PE-PGRS family protein [Mycobacterium tuberculosis T92] gi|289752802|ref|ZP_06512180.1| PE-PGRS family protein [Mycobacterium tuberculosis EAS054] gi|289415075|gb|EFD12315.1| PE-PGRS family protein [Mycobacterium tuberculosis T46] gi|289542459|gb|EFD46107.1| PE-PGRS family protein [Mycobacterium tuberculosis T17] gi|289689850|gb|EFD57279.1| PE-PGRS family protein [Mycobacterium tuberculosis T92] gi|289693389|gb|EFD60818.1| PE-PGRS family protein [Mycobacterium tuberculosis EAS054] Length=584 Score = 130 bits (328), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 88/216 (41%), Positives = 121/216 (57%), Gaps = 16/216 (7%) Query 33 RSITLTFIRNAQSQANADGIIDTDMPGSGLSADGKAEAQQVAHQVSRRD-VDSIYSSPMA 91 +SI + F+R+ Q+ NA +IDT +PG GL+A G+ +AQ +A+ ++ + I+ S + Sbjct 281 QSIVIDFVRHGQTPGNAAMLIDTAVPGPGLTALGQQQAQAIANALAAKGPYAGIFDSQLI 340 Query 92 ADQQTAGPLAGELGKQVEILPGLQAINAGWFNGKPE-SMANSTYMLAPADWLAGD--VHN 148 QQTA PLA LG ++LPGL I+AG F P+ S A Y++ P W G V Sbjct 341 RTQQTAAPLANLLGMAPQVLPGLNEIHAGIFEDLPQISPAGLLYLVGPIAWTLGFPIVPM 400 Query 149 TIPGS--ISGTEFNSQFSAAVRKIYDSGHNTPVV----------FSQGVAIMIWTLMNAR 196 PGS ++G FN F+ AV+ IYD+ PVV +S I + T+MN Sbjct 401 LAPGSTDVNGIVFNRAFTGAVQTIYDASLANPVVAADGNITSVAYSSAFTIGVGTMMNVD 460 Query 197 NSRDSLLTTHPLPNIGRVVITGNPVTGWRLVEWDGI 232 N LL THP+PN G VV+ GNP GW LV WDGI Sbjct 461 NPHPLLLLTHPVPNTGAVVVQGNPEGGWTLVSWDGI 496 >gi|340625773|ref|YP_004744225.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059] gi|340003963|emb|CCC43098.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059] Length=584 Score = 130 bits (328), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 88/216 (41%), Positives = 121/216 (57%), Gaps = 16/216 (7%) Query 33 RSITLTFIRNAQSQANADGIIDTDMPGSGLSADGKAEAQQVAHQVSRRD-VDSIYSSPMA 91 +SI + F+R+ Q+ NA +IDT +PG GL+A G+ +AQ +A+ ++ + I+ S + Sbjct 281 QSIVIDFVRHGQTPGNAAMLIDTAVPGPGLTALGQQQAQAIANALAAKGPYAGIFDSQLI 340 Query 92 ADQQTAGPLAGELGKQVEILPGLQAINAGWFNGKPE-SMANSTYMLAPADWLAGD--VHN 148 QQTA PLA LG ++LPGL I+AG F P+ S A Y++ P W G V Sbjct 341 RTQQTAAPLANLLGMAPQVLPGLNEIHAGIFEDLPQISPAGLLYLVGPIAWTLGFPIVPM 400 Query 149 TIPGS--ISGTEFNSQFSAAVRKIYDSGHNTPVV----------FSQGVAIMIWTLMNAR 196 PGS ++G FN F+ AV+ IYD+ PVV +S I + T+MN Sbjct 401 LAPGSTDVNGIVFNRAFTGAVQTIYDASLANPVVAADGNITSVAYSSAFTIGVGTMMNVD 460 Query 197 NSRDSLLTTHPLPNIGRVVITGNPVTGWRLVEWDGI 232 N LL THP+PN G VV+ GNP GW LV WDGI Sbjct 461 NPHPLLLLTHPVPNTGAVVVQGNPEGGWTLVSWDGI 496 >gi|339630823|ref|YP_004722465.1| PE-PGRS family protein [Mycobacterium africanum GM041182] gi|339330179|emb|CCC25837.1| PE-PGRS family protein [Mycobacterium africanum GM041182] Length=583 Score = 130 bits (328), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 88/216 (41%), Positives = 121/216 (57%), Gaps = 16/216 (7%) Query 33 RSITLTFIRNAQSQANADGIIDTDMPGSGLSADGKAEAQQVAHQVSRRD-VDSIYSSPMA 91 +SI + F+R+ Q+ NA +IDT +PG GL+A G+ +AQ +A+ ++ + I+ S + Sbjct 280 QSIVIDFVRHGQTPGNAAMLIDTAVPGPGLTALGQQQAQAIANALAAKGPYAGIFDSQLI 339 Query 92 ADQQTAGPLAGELGKQVEILPGLQAINAGWFNGKPE-SMANSTYMLAPADWLAGD--VHN 148 QQTA PLA LG ++LPGL I+AG F P+ S A Y++ P W G V Sbjct 340 RTQQTAAPLANLLGMAPQVLPGLNEIHAGIFEDLPQISPAGLLYLVGPIAWTLGFPIVPM 399 Query 149 TIPGS--ISGTEFNSQFSAAVRKIYDSGHNTPVV----------FSQGVAIMIWTLMNAR 196 PGS ++G FN F+ AV+ IYD+ PVV +S I + T+MN Sbjct 400 LAPGSTDVNGIVFNRAFTGAVQTIYDASLANPVVAADGNITSVAYSSAFTIGVGTMMNVD 459 Query 197 NSRDSLLTTHPLPNIGRVVITGNPVTGWRLVEWDGI 232 N LL THP+PN G VV+ GNP GW LV WDGI Sbjct 460 NPHPLLLLTHPVPNTGAVVVQGNPEGGWTLVSWDGI 495 >gi|31791941|ref|NP_854434.1| PE-PGRS family protein [Mycobacterium bovis AF2122/97] gi|57116776|ref|YP_177752.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Rv] gi|121636677|ref|YP_976900.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Pasteur 1173P2] 50 more sequence titles Length=584 Score = 130 bits (328), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 88/216 (41%), Positives = 121/216 (57%), Gaps = 16/216 (7%) Query 33 RSITLTFIRNAQSQANADGIIDTDMPGSGLSADGKAEAQQVAHQVSRRD-VDSIYSSPMA 91 +SI + F+R+ Q+ NA +IDT +PG GL+A G+ +AQ +A+ ++ + I+ S + Sbjct 281 QSIVIDFVRHGQTPGNAAMLIDTAVPGPGLTALGQQQAQAIANALAAKGPYAGIFDSQLI 340 Query 92 ADQQTAGPLAGELGKQVEILPGLQAINAGWFNGKPE-SMANSTYMLAPADWLAGD--VHN 148 QQTA PLA LG ++LPGL I+AG F P+ S A Y++ P W G V Sbjct 341 RTQQTAAPLANLLGMAPQVLPGLNEIHAGIFEDLPQISPAGLLYLVGPIAWTLGFPIVPM 400 Query 149 TIPGS--ISGTEFNSQFSAAVRKIYDSGHNTPVV----------FSQGVAIMIWTLMNAR 196 PGS ++G FN F+ AV+ IYD+ PVV +S I + T+MN Sbjct 401 LAPGSTDVNGIVFNRAFTGAVQTIYDASLANPVVAADGNITSVAYSSAFTIGVGTMMNVD 460 Query 197 NSRDSLLTTHPLPNIGRVVITGNPVTGWRLVEWDGI 232 N LL THP+PN G VV+ GNP GW LV WDGI Sbjct 461 NPHPLLLLTHPVPNTGAVVVQGNPEGGWTLVSWDGI 496 >gi|289756841|ref|ZP_06516219.1| PE-PGRS family protein [Mycobacterium tuberculosis T85] gi|289712405|gb|EFD76417.1| PE-PGRS family protein [Mycobacterium tuberculosis T85] Length=584 Score = 130 bits (327), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 88/216 (41%), Positives = 121/216 (57%), Gaps = 16/216 (7%) Query 33 RSITLTFIRNAQSQANADGIIDTDMPGSGLSADGKAEAQQVAHQVSRRD-VDSIYSSPMA 91 +SI + F+R+ Q+ NA +IDT +PG GL+A G+ +AQ +A+ ++ + I+ S + Sbjct 281 QSIVIDFVRHGQTPGNAAMLIDTAVPGPGLTALGQQQAQAIANALAAKGPYAGIFDSQLI 340 Query 92 ADQQTAGPLAGELGKQVEILPGLQAINAGWFNGKPE-SMANSTYMLAPADWLAGD--VHN 148 QQTA PLA LG ++LPGL I+AG F P+ S A Y++ P W G V Sbjct 341 RTQQTAAPLANLLGMAPQVLPGLNEIHAGIFEDLPQISPAGLLYLVGPIAWTLGFPIVPM 400 Query 149 TIPGS--ISGTEFNSQFSAAVRKIYDSGHNTPVV----------FSQGVAIMIWTLMNAR 196 PGS ++G FN F+ AV+ IYD+ PVV +S I + T+MN Sbjct 401 LAPGSTDVNGIVFNRAFTGAVQTIYDASLANPVVAADGNITSVAYSSAFTIGVGTMMNVD 460 Query 197 NSRDSLLTTHPLPNIGRVVITGNPVTGWRLVEWDGI 232 N LL THP+PN G VV+ GNP GW LV WDGI Sbjct 461 NPHPLLLLTHPVPNTGAVVVQGNPDGGWTLVSWDGI 496 >gi|336460392|gb|EGO39292.1| fructose-2,6-bisphosphatase [Mycobacterium avium subsp. paratuberculosis S397] Length=302 Score = 130 bits (326), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 93/245 (38%), Positives = 128/245 (53%), Gaps = 34/245 (13%) Query 21 LLLGACGGPTQPRSITLTFIRNAQSQANADGIIDTDMPGSGLSADGKAEAQQVAHQVSRR 80 LL A + SI + +R+ QS ANA G+IDT +PG+ L+ G+ +AQ VA ++ R Sbjct 7 LLCSASATASADESIVIDLVRHGQSVANAAGLIDTAVPGASLTQLGQQQAQTVAGVLAAR 66 Query 81 D-VDSIYSSPMAADQQTAGPLAGELGKQVEILPGLQAINAGWFNGKPE-SMANSTYMLAP 138 V +I++S + QQTA PLA LG V++LPGL I+AG FNG+P+ S+ Y+LAP Sbjct 67 GPVAAIFASQLIRTQQTAAPLATALGMNVQVLPGLNEIDAGIFNGQPQFSLGGLAYLLAP 126 Query 139 ADWLAG--DVHNTIPGSI--SGTEFNSQFSAAVRKIYDS--------------------- 173 W+ G V PGS +G EF +F A++ +Y S Sbjct 127 IAWMLGLRIVPMLAPGSADANGYEFRRRFDGALQTVYGSAAANAGGFGDVLQAVYAGAVT 186 Query 174 -------GHNTPVVFSQGVAIMIWTLMNARNSRDSLLTTHPLPNIGRVVITGNPVTGWRL 226 G T V FS AI + T+M +N LL PLPN G VVI G+P GW L Sbjct 187 NPVRAANGRITGVAFSSEFAIGVGTMMTVKNPDPLLLLFDPLPNTGIVVIQGSPRDGWTL 246 Query 227 VEWDG 231 + W+G Sbjct 247 ISWNG 251 >gi|119962181|ref|YP_949575.1| phosphoglycerate mutase family protein [Arthrobacter aurescens TC1] gi|119949040|gb|ABM07951.1| phosphoglycerate mutase family protein [Arthrobacter aurescens TC1] Length=220 Score = 127 bits (319), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 66/198 (34%), Positives = 104/198 (53%), Gaps = 0/198 (0%) Query 35 ITLTFIRNAQSQANADGIIDTDMPGSGLSADGKAEAQQVAHQVSRRDVDSIYSSPMAADQ 94 + L IR+ Q+ N G +DT PG GL+ G+ +A + ++ ++++Y+S + Sbjct 1 MKLLLIRHGQTPGNVAGQLDTAFPGPGLTELGERQAAALPEALADEAIEALYTSTLLRTH 60 Query 95 QTAGPLAGELGKQVEILPGLQAINAGWFNGKPESMANSTYMLAPADWLAGDVHNTIPGSI 154 +T PLA G + IL G+ I AG K + ++ YM W GD+ +PG+ Sbjct 61 RTVAPLARATGLEPTILEGVHEIEAGALEKKTDHESHRRYMGTVFAWTDGDLDVRMPGAF 120 Query 155 SGTEFNSQFSAAVRKIYDSGHNTPVVFSQGVAIMIWTLMNARNSRDSLLTTHPLPNIGRV 214 SG +F ++F A+V K+ +GH+T + S G AI W A + TH LPN G V Sbjct 121 SGHDFFARFDASVDKVAAAGHSTAAIVSHGAAIRCWAGRRATDIDTVFAETHQLPNTGIV 180 Query 215 VITGNPVTGWRLVEWDGI 232 + G+P GWR++ WD I Sbjct 181 ALEGDPEGGWRVLHWDQI 198 >gi|240170010|ref|ZP_04748669.1| PE-PGRS family protein [Mycobacterium kansasii ATCC 12478] Length=570 Score = 125 bits (314), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 80/216 (38%), Positives = 115/216 (54%), Gaps = 16/216 (7%) Query 33 RSITLTFIRNAQSQANADGIIDTDMPGSGLSADGKAEAQQVAHQVSRRD-VDSIYSSPMA 91 +SI + F+R+ Q+ AN G++DT +PG+ L+A G+ +A +A+ ++ + ++ S + Sbjct 277 QSIVIDFVRHGQTTANVAGLMDTAIPGANLTAVGQQQAVDIANILAPQGPFAGLFDSQLV 336 Query 92 ADQQTAGPLAGELGKQVEILPGLQAINAGWFNGKPE-SMANSTYMLAPADWLAG--DVHN 148 QQTA PLA LG +LPGL INAG F P+ S A Y+ P W G V Sbjct 337 RTQQTAAPLAAMLGMTPGVLPGLNEINAGIFEDFPQISPAGLLYLAGPMAWTFGLPIVPM 396 Query 149 TIPGSI--SGTEFNSQFSAAVRKIYDS----------GHNTPVVFSQGVAIMIWTLMNAR 196 PGSI +G F F+ AV+ +YD+ G T V +S I + T+M Sbjct 397 LNPGSIDFNGVVFGHTFNGAVQTMYDAALANPVPSADGKVTVVSYSSAFTIGVGTMMAVD 456 Query 197 NSRDSLLTTHPLPNIGRVVITGNPVTGWRLVEWDGI 232 N L+ TH LPN G VV+ G+P GW + WDGI Sbjct 457 NPNPLLILTHSLPNTGTVVLQGDPTGGWTMTSWDGI 492 Lambda K H 0.316 0.131 0.394 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 319551017258 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40