BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv3394c Length=527 Score E Sequences producing significant alignments: (Bits) Value gi|15610530|ref|NP_217911.1| hypothetical protein Rv3394c [Mycob... 1013 0.0 gi|298526876|ref|ZP_07014285.1| conserved hypothetical protein [... 1012 0.0 gi|289763576|ref|ZP_06522954.1| conserved hypothetical protein [... 1007 0.0 gi|308372529|ref|ZP_07428973.2| hypothetical protein TMDG_03138 ... 1002 0.0 gi|308378307|ref|ZP_07482168.2| hypothetical protein TMIG_03667 ... 990 0.0 gi|15842987|ref|NP_338024.1| hypothetical protein MT3501 [Mycoba... 951 0.0 gi|289747221|ref|ZP_06506599.1| conserved hypothetical protein [... 941 0.0 gi|340628372|ref|YP_004746824.1| hypothetical protein MCAN_34171... 912 0.0 gi|254366006|ref|ZP_04982051.1| conserved hypothetical protein [... 846 0.0 gi|339296218|gb|AEJ48329.1| hypothetical protein CCDC5079_3140 [... 829 0.0 gi|308380683|ref|ZP_07669251.1| hypothetical protein TMKG_03741 ... 820 0.0 gi|240167854|ref|ZP_04746513.1| hypothetical protein MkanA1_0096... 811 0.0 gi|118616684|ref|YP_905016.1| hypothetical protein MUL_0916 [Myc... 783 0.0 gi|183981173|ref|YP_001849464.1| hypothetical protein MMAR_1151 ... 781 0.0 gi|41409585|ref|NP_962421.1| hypothetical protein MAP3487c [Myco... 778 0.0 gi|254776774|ref|ZP_05218290.1| hypothetical protein MaviaA2_192... 765 0.0 gi|342861594|ref|ZP_08718241.1| hypothetical protein MCOL_22016 ... 763 0.0 gi|118463508|ref|YP_883480.1| hypothetical protein MAV_4344 [Myc... 762 0.0 gi|336459764|gb|EGO38680.1| nucleotidyltransferase/DNA polymeras... 761 0.0 gi|254822976|ref|ZP_05227977.1| hypothetical protein MintA_23814... 759 0.0 gi|333991856|ref|YP_004524470.1| hypothetical protein JDM601_321... 749 0.0 gi|289759554|ref|ZP_06518932.1| conserved hypothetical protein [... 745 0.0 gi|108798146|ref|YP_638343.1| hypothetical protein Mmcs_1175 [My... 741 0.0 gi|119867242|ref|YP_937194.1| hypothetical protein Mkms_1192 [My... 740 0.0 gi|120402532|ref|YP_952361.1| hypothetical protein Mvan_1523 [My... 717 0.0 gi|118473914|ref|YP_885998.1| DNA repair polymerase [Mycobacteri... 716 0.0 gi|289555669|ref|ZP_06444879.1| conserved hypothetical protein [... 710 0.0 gi|296168803|ref|ZP_06850485.1| probable DNA repair polymerase [... 699 0.0 gi|315445828|ref|YP_004078707.1| hypothetical protein Mspyr1_431... 679 0.0 gi|145225474|ref|YP_001136152.1| hypothetical protein Mflv_4898 ... 679 0.0 gi|169630791|ref|YP_001704440.1| hypothetical protein MAB_3712c ... 632 4e-179 gi|289571629|ref|ZP_06451856.1| conserved hypothetical protein [... 622 6e-176 gi|54022873|ref|YP_117115.1| hypothetical protein nfa9060 [Nocar... 575 6e-162 gi|167968721|ref|ZP_02550998.1| hypothetical protein MtubH3_1205... 565 7e-159 gi|325675548|ref|ZP_08155232.1| DNA-directed DNA polymerase [Rho... 551 1e-154 gi|312140815|ref|YP_004008151.1| hypothetical protein REQ_34810 ... 550 3e-154 gi|226365682|ref|YP_002783465.1| hypothetical protein ROP_62730 ... 545 6e-153 gi|111023176|ref|YP_706148.1| DNA-directed DNA polymerase [Rhodo... 534 2e-149 gi|229489611|ref|ZP_04383474.1| umuc domain protein DNA-repair p... 531 8e-149 gi|226184557|dbj|BAH32661.1| conserved hypothetical protein [Rho... 528 1e-147 gi|289755523|ref|ZP_06514901.1| LOW QUALITY PROTEIN: conserved h... 523 4e-146 gi|289752110|ref|ZP_06511488.1| conserved hypothetical protein [... 515 9e-144 gi|296138653|ref|YP_003645896.1| hypothetical protein Tpau_0923 ... 515 9e-144 gi|262201692|ref|YP_003272900.1| hypothetical protein Gbro_1747 ... 504 1e-140 gi|289747223|ref|ZP_06506601.1| conserved hypothetical protein [... 496 3e-138 gi|333921669|ref|YP_004495250.1| hypothetical protein AS9A_4016 ... 488 9e-136 gi|343928293|ref|ZP_08767746.1| hypothetical protein GOALK_112_0... 486 4e-135 gi|326381917|ref|ZP_08203610.1| hypothetical protein SCNU_03197 ... 484 2e-134 gi|134103091|ref|YP_001108752.1| putative DNA-directed DNA polym... 455 9e-126 gi|308406146|ref|ZP_07495286.2| hypothetical protein TMLG_02983 ... 452 7e-125 >gi|15610530|ref|NP_217911.1| hypothetical protein Rv3394c [Mycobacterium tuberculosis H37Rv] gi|31794574|ref|NP_857067.1| hypothetical protein Mb3426c [Mycobacterium bovis AF2122/97] gi|121639318|ref|YP_979542.1| hypothetical protein BCG_3463c [Mycobacterium bovis BCG str. Pasteur 1173P2] 33 more sequence titles Length=527 Score = 1013 bits (2620), Expect = 0.0, Method: Compositional matrix adjust. Identities = 526/527 (99%), Positives = 527/527 (100%), Gaps = 0/527 (0%) Query 1 VMASARVLAIWCMDWPAVAAAAAAGLSATAPVAVTLANRVIACSATARAAGVRRGLRRRE 60 +MASARVLAIWCMDWPAVAAAAAAGLSATAPVAVTLANRVIACSATARAAGVRRGLRRRE Sbjct 1 MMASARVLAIWCMDWPAVAAAAAAGLSATAPVAVTLANRVIACSATARAAGVRRGLRRRE 60 Query 61 AAARCPQLFIATADADRDARLFEGVIAAVDDLVPRAELLRPGLLVLPVRGPARFFGSEQM 120 AAARCPQLFIATADADRDARLFEGVIAAVDDLVPRAELLRPGLLVLPVRGPARFFGSEQM Sbjct 61 AAARCPQLFIATADADRDARLFEGVIAAVDDLVPRAELLRPGLLVLPVRGPARFFGSEQM 120 Query 121 AAERLIDAVAAAGAECQVGIADRLSTAVFAARAGRIVEPGGDARFLSLLSIRQLATEPSL 180 AAERLIDAVAAAGAECQVGIADRLSTAVFAARAGRIVEPGGDARFLSLLSIRQLATEPSL Sbjct 121 AAERLIDAVAAAGAECQVGIADRLSTAVFAARAGRIVEPGGDARFLSLLSIRQLATEPSL 180 Query 181 SGPGRDDLTDLLWRMGIRTIGQFAALSRTDVASRFGADAVAAHRFARGEPERAPCGREPP 240 SGPGRDDLTDLLWRMGIRTIGQFAALSRTDVASRFGADAVAAHRFARGEPERAPCGREPP Sbjct 181 SGPGRDDLTDLLWRMGIRTIGQFAALSRTDVASRFGADAVAAHRFARGEPERAPCGREPP 240 Query 241 PDLAAELACDPPIDRVDAAAFAGRSLAAELHRALMAAGVGCTRLAIHAVTANGEERSRVW 300 PDLAAELACDPPIDRVDAAAFAGRSLAAELHRALMAAGVGCTRLAIHAVTANGEERSRVW Sbjct 241 PDLAAELACDPPIDRVDAAAFAGRSLAAELHRALMAAGVGCTRLAIHAVTANGEERSRVW 300 Query 301 RCAEPLTEDATADRVRWQLDGWLNNRNARDRPTAAVTLLRLQAVETVSASEGLQLPLWGG 360 RCAEPLTEDATADRVRWQLDGWLNNRNARDRPTAAVTLLRLQAVETVSASEGLQLPLWGG Sbjct 301 RCAEPLTEDATADRVRWQLDGWLNNRNARDRPTAAVTLLRLQAVETVSASEGLQLPLWGG 360 Query 361 LGEQDRLRARRALVRVQGLLGPEAVRVPVLSGGHGPAERITLTVLGLVAPEPVPQADPGQ 420 LGEQDRLRARRALVRVQGLLGPEAVRVPVLSGGHGPAERITLTVLGLVAPEPVPQADPGQ Sbjct 361 LGEQDRLRARRALVRVQGLLGPEAVRVPVLSGGHGPAERITLTVLGLVAPEPVPQADPGQ 420 Query 421 PWPGRLPDPSPAVLFDDPVDLLDAQGNPIRVTSRGMFSADPARLRVRGRDDRLRWWAGPW 480 PWPGRLPDPSPAVLFDDPVDLLDAQGNPIRVTSRGMFSADPARLRVRGRDDRLRWWAGPW Sbjct 421 PWPGRLPDPSPAVLFDDPVDLLDAQGNPIRVTSRGMFSADPARLRVRGRDDRLRWWAGPW 480 Query 481 PDDERWWDPDRASGRTARAQVLLDGDPGTALLLCYRQRRWYLEGSYE 527 PDDERWWDPDRASGRTARAQVLLDGDPGTALLLCYRQRRWYLEGSYE Sbjct 481 PDDERWWDPDRASGRTARAQVLLDGDPGTALLLCYRQRRWYLEGSYE 527 >gi|298526876|ref|ZP_07014285.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A] gi|298496670|gb|EFI31964.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A] gi|323717880|gb|EGB27069.1| hypothetical protein TMMG_03559 [Mycobacterium tuberculosis CDC1551A] gi|328460172|gb|AEB05595.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 4207] Length=526 Score = 1012 bits (2616), Expect = 0.0, Method: Compositional matrix adjust. Identities = 526/526 (100%), Positives = 526/526 (100%), Gaps = 0/526 (0%) Query 2 MASARVLAIWCMDWPAVAAAAAAGLSATAPVAVTLANRVIACSATARAAGVRRGLRRREA 61 MASARVLAIWCMDWPAVAAAAAAGLSATAPVAVTLANRVIACSATARAAGVRRGLRRREA Sbjct 1 MASARVLAIWCMDWPAVAAAAAAGLSATAPVAVTLANRVIACSATARAAGVRRGLRRREA 60 Query 62 AARCPQLFIATADADRDARLFEGVIAAVDDLVPRAELLRPGLLVLPVRGPARFFGSEQMA 121 AARCPQLFIATADADRDARLFEGVIAAVDDLVPRAELLRPGLLVLPVRGPARFFGSEQMA Sbjct 61 AARCPQLFIATADADRDARLFEGVIAAVDDLVPRAELLRPGLLVLPVRGPARFFGSEQMA 120 Query 122 AERLIDAVAAAGAECQVGIADRLSTAVFAARAGRIVEPGGDARFLSLLSIRQLATEPSLS 181 AERLIDAVAAAGAECQVGIADRLSTAVFAARAGRIVEPGGDARFLSLLSIRQLATEPSLS Sbjct 121 AERLIDAVAAAGAECQVGIADRLSTAVFAARAGRIVEPGGDARFLSLLSIRQLATEPSLS 180 Query 182 GPGRDDLTDLLWRMGIRTIGQFAALSRTDVASRFGADAVAAHRFARGEPERAPCGREPPP 241 GPGRDDLTDLLWRMGIRTIGQFAALSRTDVASRFGADAVAAHRFARGEPERAPCGREPPP Sbjct 181 GPGRDDLTDLLWRMGIRTIGQFAALSRTDVASRFGADAVAAHRFARGEPERAPCGREPPP 240 Query 242 DLAAELACDPPIDRVDAAAFAGRSLAAELHRALMAAGVGCTRLAIHAVTANGEERSRVWR 301 DLAAELACDPPIDRVDAAAFAGRSLAAELHRALMAAGVGCTRLAIHAVTANGEERSRVWR Sbjct 241 DLAAELACDPPIDRVDAAAFAGRSLAAELHRALMAAGVGCTRLAIHAVTANGEERSRVWR 300 Query 302 CAEPLTEDATADRVRWQLDGWLNNRNARDRPTAAVTLLRLQAVETVSASEGLQLPLWGGL 361 CAEPLTEDATADRVRWQLDGWLNNRNARDRPTAAVTLLRLQAVETVSASEGLQLPLWGGL Sbjct 301 CAEPLTEDATADRVRWQLDGWLNNRNARDRPTAAVTLLRLQAVETVSASEGLQLPLWGGL 360 Query 362 GEQDRLRARRALVRVQGLLGPEAVRVPVLSGGHGPAERITLTVLGLVAPEPVPQADPGQP 421 GEQDRLRARRALVRVQGLLGPEAVRVPVLSGGHGPAERITLTVLGLVAPEPVPQADPGQP Sbjct 361 GEQDRLRARRALVRVQGLLGPEAVRVPVLSGGHGPAERITLTVLGLVAPEPVPQADPGQP 420 Query 422 WPGRLPDPSPAVLFDDPVDLLDAQGNPIRVTSRGMFSADPARLRVRGRDDRLRWWAGPWP 481 WPGRLPDPSPAVLFDDPVDLLDAQGNPIRVTSRGMFSADPARLRVRGRDDRLRWWAGPWP Sbjct 421 WPGRLPDPSPAVLFDDPVDLLDAQGNPIRVTSRGMFSADPARLRVRGRDDRLRWWAGPWP 480 Query 482 DDERWWDPDRASGRTARAQVLLDGDPGTALLLCYRQRRWYLEGSYE 527 DDERWWDPDRASGRTARAQVLLDGDPGTALLLCYRQRRWYLEGSYE Sbjct 481 DDERWWDPDRASGRTARAQVLLDGDPGTALLLCYRQRRWYLEGSYE 526 >gi|289763576|ref|ZP_06522954.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 1503] gi|289711082|gb|EFD75098.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 1503] Length=527 Score = 1007 bits (2603), Expect = 0.0, Method: Compositional matrix adjust. Identities = 523/527 (99%), Positives = 524/527 (99%), Gaps = 0/527 (0%) Query 1 VMASARVLAIWCMDWPAVAAAAAAGLSATAPVAVTLANRVIACSATARAAGVRRGLRRRE 60 +MASARVLAIWCMDWPAVAAAAAAGLSATAPVAVTLANRVIACSATARAAGVRRGLRRRE Sbjct 1 MMASARVLAIWCMDWPAVAAAAAAGLSATAPVAVTLANRVIACSATARAAGVRRGLRRRE 60 Query 61 AAARCPQLFIATADADRDARLFEGVIAAVDDLVPRAELLRPGLLVLPVRGPARFFGSEQM 120 AAARCPQLFIATADADRDARLFEGVIAAVDDLVPRAELLRPGLLVLPVRGPARFFGSEQM Sbjct 61 AAARCPQLFIATADADRDARLFEGVIAAVDDLVPRAELLRPGLLVLPVRGPARFFGSEQM 120 Query 121 AAERLIDAVAAAGAECQVGIADRLSTAVFAARAGRIVEPGGDARFLSLLSIRQLATEPSL 180 AAERLIDAVAAAGAECQVGIADRLSTAVFAARAGRIVEPGGDARFLSLLSIRQLATEPSL Sbjct 121 AAERLIDAVAAAGAECQVGIADRLSTAVFAARAGRIVEPGGDARFLSLLSIRQLATEPSL 180 Query 181 SGPGRDDLTDLLWRMGIRTIGQFAALSRTDVASRFGADAVAAHRFARGEPERAPCGREPP 240 SGPGRDDLTDLLWRMGIRTIGQFAALSRTDVASRFGADAVAAHRFA PERAPCGREPP Sbjct 181 SGPGRDDLTDLLWRMGIRTIGQFAALSRTDVASRFGADAVAAHRFAAANPERAPCGREPP 240 Query 241 PDLAAELACDPPIDRVDAAAFAGRSLAAELHRALMAAGVGCTRLAIHAVTANGEERSRVW 300 PDLAAELACDPPIDRVDAAAFAGRSLAAELHRALMAAGVGCTRLAIHAVTANGEERSRVW Sbjct 241 PDLAAELACDPPIDRVDAAAFAGRSLAAELHRALMAAGVGCTRLAIHAVTANGEERSRVW 300 Query 301 RCAEPLTEDATADRVRWQLDGWLNNRNARDRPTAAVTLLRLQAVETVSASEGLQLPLWGG 360 RCAEPLTEDATADRVRWQLDGWLNNRNARDRPTAAVTLLRLQAVETVSASEGLQLPLWGG Sbjct 301 RCAEPLTEDATADRVRWQLDGWLNNRNARDRPTAAVTLLRLQAVETVSASEGLQLPLWGG 360 Query 361 LGEQDRLRARRALVRVQGLLGPEAVRVPVLSGGHGPAERITLTVLGLVAPEPVPQADPGQ 420 LGEQDRLRARRALVRVQGLLGPEAVRVPVLSGGHGPAERITLTVLGLVAPEPVPQADPGQ Sbjct 361 LGEQDRLRARRALVRVQGLLGPEAVRVPVLSGGHGPAERITLTVLGLVAPEPVPQADPGQ 420 Query 421 PWPGRLPDPSPAVLFDDPVDLLDAQGNPIRVTSRGMFSADPARLRVRGRDDRLRWWAGPW 480 PWPGRLPDPSPAVLFDDPVDLLDAQGNPIRVTSRGMFSADPARLRVRGRDDRLRWWAGPW Sbjct 421 PWPGRLPDPSPAVLFDDPVDLLDAQGNPIRVTSRGMFSADPARLRVRGRDDRLRWWAGPW 480 Query 481 PDDERWWDPDRASGRTARAQVLLDGDPGTALLLCYRQRRWYLEGSYE 527 PDDERWWDPDRASGRTARAQVLLDGDPGTALLLCYRQRRWYLEGSYE Sbjct 481 PDDERWWDPDRASGRTARAQVLLDGDPGTALLLCYRQRRWYLEGSYE 527 >gi|308372529|ref|ZP_07428973.2| hypothetical protein TMDG_03138 [Mycobacterium tuberculosis SUMu004] gi|308332947|gb|EFP21798.1| hypothetical protein TMDG_03138 [Mycobacterium tuberculosis SUMu004] Length=521 Score = 1002 bits (2590), Expect = 0.0, Method: Compositional matrix adjust. Identities = 520/521 (99%), Positives = 521/521 (100%), Gaps = 0/521 (0%) Query 7 VLAIWCMDWPAVAAAAAAGLSATAPVAVTLANRVIACSATARAAGVRRGLRRREAAARCP 66 +LAIWCMDWPAVAAAAAAGLSATAPVAVTLANRVIACSATARAAGVRRGLRRREAAARCP Sbjct 1 MLAIWCMDWPAVAAAAAAGLSATAPVAVTLANRVIACSATARAAGVRRGLRRREAAARCP 60 Query 67 QLFIATADADRDARLFEGVIAAVDDLVPRAELLRPGLLVLPVRGPARFFGSEQMAAERLI 126 QLFIATADADRDARLFEGVIAAVDDLVPRAELLRPGLLVLPVRGPARFFGSEQMAAERLI Sbjct 61 QLFIATADADRDARLFEGVIAAVDDLVPRAELLRPGLLVLPVRGPARFFGSEQMAAERLI 120 Query 127 DAVAAAGAECQVGIADRLSTAVFAARAGRIVEPGGDARFLSLLSIRQLATEPSLSGPGRD 186 DAVAAAGAECQVGIADRLSTAVFAARAGRIVEPGGDARFLSLLSIRQLATEPSLSGPGRD Sbjct 121 DAVAAAGAECQVGIADRLSTAVFAARAGRIVEPGGDARFLSLLSIRQLATEPSLSGPGRD 180 Query 187 DLTDLLWRMGIRTIGQFAALSRTDVASRFGADAVAAHRFARGEPERAPCGREPPPDLAAE 246 DLTDLLWRMGIRTIGQFAALSRTDVASRFGADAVAAHRFARGEPERAPCGREPPPDLAAE Sbjct 181 DLTDLLWRMGIRTIGQFAALSRTDVASRFGADAVAAHRFARGEPERAPCGREPPPDLAAE 240 Query 247 LACDPPIDRVDAAAFAGRSLAAELHRALMAAGVGCTRLAIHAVTANGEERSRVWRCAEPL 306 LACDPPIDRVDAAAFAGRSLAAELHRALMAAGVGCTRLAIHAVTANGEERSRVWRCAEPL Sbjct 241 LACDPPIDRVDAAAFAGRSLAAELHRALMAAGVGCTRLAIHAVTANGEERSRVWRCAEPL 300 Query 307 TEDATADRVRWQLDGWLNNRNARDRPTAAVTLLRLQAVETVSASEGLQLPLWGGLGEQDR 366 TEDATADRVRWQLDGWLNNRNARDRPTAAVTLLRLQAVETVSASEGLQLPLWGGLGEQDR Sbjct 301 TEDATADRVRWQLDGWLNNRNARDRPTAAVTLLRLQAVETVSASEGLQLPLWGGLGEQDR 360 Query 367 LRARRALVRVQGLLGPEAVRVPVLSGGHGPAERITLTVLGLVAPEPVPQADPGQPWPGRL 426 LRARRALVRVQGLLGPEAVRVPVLSGGHGPAERITLTVLGLVAPEPVPQADPGQPWPGRL Sbjct 361 LRARRALVRVQGLLGPEAVRVPVLSGGHGPAERITLTVLGLVAPEPVPQADPGQPWPGRL 420 Query 427 PDPSPAVLFDDPVDLLDAQGNPIRVTSRGMFSADPARLRVRGRDDRLRWWAGPWPDDERW 486 PDPSPAVLFDDPVDLLDAQGNPIRVTSRGMFSADPARLRVRGRDDRLRWWAGPWPDDERW Sbjct 421 PDPSPAVLFDDPVDLLDAQGNPIRVTSRGMFSADPARLRVRGRDDRLRWWAGPWPDDERW 480 Query 487 WDPDRASGRTARAQVLLDGDPGTALLLCYRQRRWYLEGSYE 527 WDPDRASGRTARAQVLLDGDPGTALLLCYRQRRWYLEGSYE Sbjct 481 WDPDRASGRTARAQVLLDGDPGTALLLCYRQRRWYLEGSYE 521 >gi|308378307|ref|ZP_07482168.2| hypothetical protein TMIG_03667 [Mycobacterium tuberculosis SUMu009] gi|308352958|gb|EFP41809.1| hypothetical protein TMIG_03667 [Mycobacterium tuberculosis SUMu009] Length=515 Score = 990 bits (2560), Expect = 0.0, Method: Compositional matrix adjust. Identities = 515/515 (100%), Positives = 515/515 (100%), Gaps = 0/515 (0%) Query 13 MDWPAVAAAAAAGLSATAPVAVTLANRVIACSATARAAGVRRGLRRREAAARCPQLFIAT 72 MDWPAVAAAAAAGLSATAPVAVTLANRVIACSATARAAGVRRGLRRREAAARCPQLFIAT Sbjct 1 MDWPAVAAAAAAGLSATAPVAVTLANRVIACSATARAAGVRRGLRRREAAARCPQLFIAT 60 Query 73 ADADRDARLFEGVIAAVDDLVPRAELLRPGLLVLPVRGPARFFGSEQMAAERLIDAVAAA 132 ADADRDARLFEGVIAAVDDLVPRAELLRPGLLVLPVRGPARFFGSEQMAAERLIDAVAAA Sbjct 61 ADADRDARLFEGVIAAVDDLVPRAELLRPGLLVLPVRGPARFFGSEQMAAERLIDAVAAA 120 Query 133 GAECQVGIADRLSTAVFAARAGRIVEPGGDARFLSLLSIRQLATEPSLSGPGRDDLTDLL 192 GAECQVGIADRLSTAVFAARAGRIVEPGGDARFLSLLSIRQLATEPSLSGPGRDDLTDLL Sbjct 121 GAECQVGIADRLSTAVFAARAGRIVEPGGDARFLSLLSIRQLATEPSLSGPGRDDLTDLL 180 Query 193 WRMGIRTIGQFAALSRTDVASRFGADAVAAHRFARGEPERAPCGREPPPDLAAELACDPP 252 WRMGIRTIGQFAALSRTDVASRFGADAVAAHRFARGEPERAPCGREPPPDLAAELACDPP Sbjct 181 WRMGIRTIGQFAALSRTDVASRFGADAVAAHRFARGEPERAPCGREPPPDLAAELACDPP 240 Query 253 IDRVDAAAFAGRSLAAELHRALMAAGVGCTRLAIHAVTANGEERSRVWRCAEPLTEDATA 312 IDRVDAAAFAGRSLAAELHRALMAAGVGCTRLAIHAVTANGEERSRVWRCAEPLTEDATA Sbjct 241 IDRVDAAAFAGRSLAAELHRALMAAGVGCTRLAIHAVTANGEERSRVWRCAEPLTEDATA 300 Query 313 DRVRWQLDGWLNNRNARDRPTAAVTLLRLQAVETVSASEGLQLPLWGGLGEQDRLRARRA 372 DRVRWQLDGWLNNRNARDRPTAAVTLLRLQAVETVSASEGLQLPLWGGLGEQDRLRARRA Sbjct 301 DRVRWQLDGWLNNRNARDRPTAAVTLLRLQAVETVSASEGLQLPLWGGLGEQDRLRARRA 360 Query 373 LVRVQGLLGPEAVRVPVLSGGHGPAERITLTVLGLVAPEPVPQADPGQPWPGRLPDPSPA 432 LVRVQGLLGPEAVRVPVLSGGHGPAERITLTVLGLVAPEPVPQADPGQPWPGRLPDPSPA Sbjct 361 LVRVQGLLGPEAVRVPVLSGGHGPAERITLTVLGLVAPEPVPQADPGQPWPGRLPDPSPA 420 Query 433 VLFDDPVDLLDAQGNPIRVTSRGMFSADPARLRVRGRDDRLRWWAGPWPDDERWWDPDRA 492 VLFDDPVDLLDAQGNPIRVTSRGMFSADPARLRVRGRDDRLRWWAGPWPDDERWWDPDRA Sbjct 421 VLFDDPVDLLDAQGNPIRVTSRGMFSADPARLRVRGRDDRLRWWAGPWPDDERWWDPDRA 480 Query 493 SGRTARAQVLLDGDPGTALLLCYRQRRWYLEGSYE 527 SGRTARAQVLLDGDPGTALLLCYRQRRWYLEGSYE Sbjct 481 SGRTARAQVLLDGDPGTALLLCYRQRRWYLEGSYE 515 >gi|15842987|ref|NP_338024.1| hypothetical protein MT3501 [Mycobacterium tuberculosis CDC1551] gi|13883327|gb|AAK47838.1| hypothetical protein MT3501 [Mycobacterium tuberculosis CDC1551] Length=492 Score = 951 bits (2458), Expect = 0.0, Method: Compositional matrix adjust. Identities = 491/492 (99%), Positives = 492/492 (100%), Gaps = 0/492 (0%) Query 36 LANRVIACSATARAAGVRRGLRRREAAARCPQLFIATADADRDARLFEGVIAAVDDLVPR 95 +ANRVIACSATARAAGVRRGLRRREAAARCPQLFIATADADRDARLFEGVIAAVDDLVPR Sbjct 1 MANRVIACSATARAAGVRRGLRRREAAARCPQLFIATADADRDARLFEGVIAAVDDLVPR 60 Query 96 AELLRPGLLVLPVRGPARFFGSEQMAAERLIDAVAAAGAECQVGIADRLSTAVFAARAGR 155 AELLRPGLLVLPVRGPARFFGSEQMAAERLIDAVAAAGAECQVGIADRLSTAVFAARAGR Sbjct 61 AELLRPGLLVLPVRGPARFFGSEQMAAERLIDAVAAAGAECQVGIADRLSTAVFAARAGR 120 Query 156 IVEPGGDARFLSLLSIRQLATEPSLSGPGRDDLTDLLWRMGIRTIGQFAALSRTDVASRF 215 IVEPGGDARFLSLLSIRQLATEPSLSGPGRDDLTDLLWRMGIRTIGQFAALSRTDVASRF Sbjct 121 IVEPGGDARFLSLLSIRQLATEPSLSGPGRDDLTDLLWRMGIRTIGQFAALSRTDVASRF 180 Query 216 GADAVAAHRFARGEPERAPCGREPPPDLAAELACDPPIDRVDAAAFAGRSLAAELHRALM 275 GADAVAAHRFARGEPERAPCGREPPPDLAAELACDPPIDRVDAAAFAGRSLAAELHRALM Sbjct 181 GADAVAAHRFARGEPERAPCGREPPPDLAAELACDPPIDRVDAAAFAGRSLAAELHRALM 240 Query 276 AAGVGCTRLAIHAVTANGEERSRVWRCAEPLTEDATADRVRWQLDGWLNNRNARDRPTAA 335 AAGVGCTRLAIHAVTANGEERSRVWRCAEPLTEDATADRVRWQLDGWLNNRNARDRPTAA Sbjct 241 AAGVGCTRLAIHAVTANGEERSRVWRCAEPLTEDATADRVRWQLDGWLNNRNARDRPTAA 300 Query 336 VTLLRLQAVETVSASEGLQLPLWGGLGEQDRLRARRALVRVQGLLGPEAVRVPVLSGGHG 395 VTLLRLQAVETVSASEGLQLPLWGGLGEQDRLRARRALVRVQGLLGPEAVRVPVLSGGHG Sbjct 301 VTLLRLQAVETVSASEGLQLPLWGGLGEQDRLRARRALVRVQGLLGPEAVRVPVLSGGHG 360 Query 396 PAERITLTVLGLVAPEPVPQADPGQPWPGRLPDPSPAVLFDDPVDLLDAQGNPIRVTSRG 455 PAERITLTVLGLVAPEPVPQADPGQPWPGRLPDPSPAVLFDDPVDLLDAQGNPIRVTSRG Sbjct 361 PAERITLTVLGLVAPEPVPQADPGQPWPGRLPDPSPAVLFDDPVDLLDAQGNPIRVTSRG 420 Query 456 MFSADPARLRVRGRDDRLRWWAGPWPDDERWWDPDRASGRTARAQVLLDGDPGTALLLCY 515 MFSADPARLRVRGRDDRLRWWAGPWPDDERWWDPDRASGRTARAQVLLDGDPGTALLLCY Sbjct 421 MFSADPARLRVRGRDDRLRWWAGPWPDDERWWDPDRASGRTARAQVLLDGDPGTALLLCY 480 Query 516 RQRRWYLEGSYE 527 RQRRWYLEGSYE Sbjct 481 RQRRWYLEGSYE 492 >gi|289747221|ref|ZP_06506599.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987] gi|289687749|gb|EFD55237.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987] Length=488 Score = 941 bits (2433), Expect = 0.0, Method: Compositional matrix adjust. Identities = 487/488 (99%), Positives = 488/488 (100%), Gaps = 0/488 (0%) Query 40 VIACSATARAAGVRRGLRRREAAARCPQLFIATADADRDARLFEGVIAAVDDLVPRAELL 99 +IACSATARAAGVRRGLRRREAAARCPQLFIATADADRDARLFEGVIAAVDDLVPRAELL Sbjct 1 MIACSATARAAGVRRGLRRREAAARCPQLFIATADADRDARLFEGVIAAVDDLVPRAELL 60 Query 100 RPGLLVLPVRGPARFFGSEQMAAERLIDAVAAAGAECQVGIADRLSTAVFAARAGRIVEP 159 RPGLLVLPVRGPARFFGSEQMAAERLIDAVAAAGAECQVGIADRLSTAVFAARAGRIVEP Sbjct 61 RPGLLVLPVRGPARFFGSEQMAAERLIDAVAAAGAECQVGIADRLSTAVFAARAGRIVEP 120 Query 160 GGDARFLSLLSIRQLATEPSLSGPGRDDLTDLLWRMGIRTIGQFAALSRTDVASRFGADA 219 GGDARFLSLLSIRQLATEPSLSGPGRDDLTDLLWRMGIRTIGQFAALSRTDVASRFGADA Sbjct 121 GGDARFLSLLSIRQLATEPSLSGPGRDDLTDLLWRMGIRTIGQFAALSRTDVASRFGADA 180 Query 220 VAAHRFARGEPERAPCGREPPPDLAAELACDPPIDRVDAAAFAGRSLAAELHRALMAAGV 279 VAAHRFARGEPERAPCGREPPPDLAAELACDPPIDRVDAAAFAGRSLAAELHRALMAAGV Sbjct 181 VAAHRFARGEPERAPCGREPPPDLAAELACDPPIDRVDAAAFAGRSLAAELHRALMAAGV 240 Query 280 GCTRLAIHAVTANGEERSRVWRCAEPLTEDATADRVRWQLDGWLNNRNARDRPTAAVTLL 339 GCTRLAIHAVTANGEERSRVWRCAEPLTEDATADRVRWQLDGWLNNRNARDRPTAAVTLL Sbjct 241 GCTRLAIHAVTANGEERSRVWRCAEPLTEDATADRVRWQLDGWLNNRNARDRPTAAVTLL 300 Query 340 RLQAVETVSASEGLQLPLWGGLGEQDRLRARRALVRVQGLLGPEAVRVPVLSGGHGPAER 399 RLQAVETVSASEGLQLPLWGGLGEQDRLRARRALVRVQGLLGPEAVRVPVLSGGHGPAER Sbjct 301 RLQAVETVSASEGLQLPLWGGLGEQDRLRARRALVRVQGLLGPEAVRVPVLSGGHGPAER 360 Query 400 ITLTVLGLVAPEPVPQADPGQPWPGRLPDPSPAVLFDDPVDLLDAQGNPIRVTSRGMFSA 459 ITLTVLGLVAPEPVPQADPGQPWPGRLPDPSPAVLFDDPVDLLDAQGNPIRVTSRGMFSA Sbjct 361 ITLTVLGLVAPEPVPQADPGQPWPGRLPDPSPAVLFDDPVDLLDAQGNPIRVTSRGMFSA 420 Query 460 DPARLRVRGRDDRLRWWAGPWPDDERWWDPDRASGRTARAQVLLDGDPGTALLLCYRQRR 519 DPARLRVRGRDDRLRWWAGPWPDDERWWDPDRASGRTARAQVLLDGDPGTALLLCYRQRR Sbjct 421 DPARLRVRGRDDRLRWWAGPWPDDERWWDPDRASGRTARAQVLLDGDPGTALLLCYRQRR 480 Query 520 WYLEGSYE 527 WYLEGSYE Sbjct 481 WYLEGSYE 488 >gi|340628372|ref|YP_004746824.1| hypothetical protein MCAN_34171 [Mycobacterium canettii CIPT 140010059] gi|340006562|emb|CCC45748.1| conserved hypothetical protein [Mycobacterium canettii CIPT 140010059] Length=522 Score = 912 bits (2358), Expect = 0.0, Method: Compositional matrix adjust. Identities = 503/527 (96%), Positives = 512/527 (98%), Gaps = 5/527 (0%) Query 1 VMASARVLAIWCMDWPAVAAAAAAGLSATAPVAVTLANRVIACSATARAAGVRRGLRRRE 60 +MASARVLAIWCMDWPAVAAAAAAGLSATAPVAVTLANRVIACSATARAAGVRRGLRRRE Sbjct 1 MMASARVLAIWCMDWPAVAAAAAAGLSATAPVAVTLANRVIACSATARAAGVRRGLRRRE 60 Query 61 AAARCPQLFIATADADRDARLFEGVIAAVDDLVPRAELLRPGLLVLPVRGPARFFGSEQM 120 AAARCPQLFIATADADRDARLFEGVIAAVDDLVPRAELLRPGLLVLPVRGPARFFGSEQM Sbjct 61 AAARCPQLFIATADADRDARLFEGVIAAVDDLVPRAELLRPGLLVLPVRGPARFFGSEQM 120 Query 121 AAERLIDAVAAAGAECQVGIADRLSTAVFAARAGRIVEPGGDARFLSLLSIRQLATEPSL 180 AAERLIDAVAAAGAECQVGIADRLSTAVFAARAGRIVEPGGDARFLSLLSIRQLATEPSL Sbjct 121 AAERLIDAVAAAGAECQVGIADRLSTAVFAARAGRIVEPGGDARFLSLLSIRQLATEPSL 180 Query 181 SGPGRDDLTDLLWRMGIRTIGQFAALSRTDVASRFGADAVAAHRFARGEPERAPCGREPP 240 SGPGRDDLTDLLWRMGIRTIGQFAALSRTDVASRFGADAVAAHRFARGEPERAPCGREPP Sbjct 181 SGPGRDDLTDLLWRMGIRTIGQFAALSRTDVASRFGADAVAAHRFARGEPERAPCGREPP 240 Query 241 PDLAAELACDPPIDRVDAAAFAGRSLAAELHRALMAAGVGCTRLAIHAVTANGEERSRVW 300 PDLAAELACDPP+DRVDAAAFAGRSLAAELH+ALMAAGVGCTRLAIHAVTANGEERSRVW Sbjct 241 PDLAAELACDPPVDRVDAAAFAGRSLAAELHQALMAAGVGCTRLAIHAVTANGEERSRVW 300 Query 301 RCAEPLTEDATADRVRWQLDGWLNNRNARDRPTAAVTLLRLQAVETVSASEGLQLPLWGG 360 RCAEPLTEDATADRVRWQLDGWLNNRNARDRPTAAVTLLRLQAVETVSASEGLQLPLWGG Sbjct 301 RCAEPLTEDATADRVRWQLDGWLNNRNARDRPTAAVTLLRLQAVETVSASEGLQLPLWGG 360 Query 361 LGEQDRLRARRALVRVQGLLGPEAVRVPVLSGGHGPAERITLTVLGLVAPEPVPQADPGQ 420 LGEQDRLRARRALVRVQGLLGPEAVRVPVLSGG GPAERITLT LG EPVPQADPGQ Sbjct 361 LGEQDRLRARRALVRVQGLLGPEAVRVPVLSGGRGPAERITLTPLG---DEPVPQADPGQ 417 Query 421 PWPGRLPDPSPAVLFDDPVDLLDAQGNPIRVTSRGMFSADPARLRVRGRDDRLRWWAGPW 480 PWPG+LPDPSPAVL D+PV+LLDAQGNPIRVTSRGMF+ADPARL VRGRDDRLRWWAGPW Sbjct 418 PWPGQLPDPSPAVLLDEPVELLDAQGNPIRVTSRGMFTADPARLTVRGRDDRLRWWAGPW 477 Query 481 PDDERWWDPDRASGRTARAQVLLDGDPGTALLLCYRQRRWYLEGSYE 527 P DERWWDPDRA GRTAR QVLL+ + ALLLCYRQRRWYLEGSYE Sbjct 478 PVDERWWDPDRAGGRTARVQVLLESE--RALLLCYRQRRWYLEGSYE 522 >gi|254366006|ref|ZP_04982051.1| conserved hypothetical protein [Mycobacterium tuberculosis str. Haarlem] gi|134151519|gb|EBA43564.1| conserved hypothetical protein [Mycobacterium tuberculosis str. Haarlem] Length=496 Score = 846 bits (2186), Expect = 0.0, Method: Compositional matrix adjust. Identities = 456/479 (96%), Positives = 460/479 (97%), Gaps = 2/479 (0%) Query 51 GVRRGLRRREAA-ARCPQ-LFIATADADRDARLFEGVIAAVDDLVPRAELLRPGLLVLPV 108 G RGLRRREA+ A PQ ++ +GVIAAVDDLVPRAELLRPGLLVLPV Sbjct 18 GAPRGLRRREASGAGVPQPVYSDCPTPTATPGSSKGVIAAVDDLVPRAELLRPGLLVLPV 77 Query 109 RGPARFFGSEQMAAERLIDAVAAAGAECQVGIADRLSTAVFAARAGRIVEPGGDARFLSL 168 RGPARFFGSEQMAAERLIDAVAAAGAECQVGIADRLSTAVFAARAGRIVEPGGDARFLSL Sbjct 78 RGPARFFGSEQMAAERLIDAVAAAGAECQVGIADRLSTAVFAARAGRIVEPGGDARFLSL 137 Query 169 LSIRQLATEPSLSGPGRDDLTDLLWRMGIRTIGQFAALSRTDVASRFGADAVAAHRFARG 228 LSIRQLATEPSLSGPGRDDLTDLLWRMGIRTIGQFAALSRTDVASRFGADAVAAHRFARG Sbjct 138 LSIRQLATEPSLSGPGRDDLTDLLWRMGIRTIGQFAALSRTDVASRFGADAVAAHRFARG 197 Query 229 EPERAPCGREPPPDLAAELACDPPIDRVDAAAFAGRSLAAELHRALMAAGVGCTRLAIHA 288 EPERAPCGREPPPDLAAELACDPPIDRVDAAAFAGRSLAAELHRALMAAGVGCTRLAIHA Sbjct 198 EPERAPCGREPPPDLAAELACDPPIDRVDAAAFAGRSLAAELHRALMAAGVGCTRLAIHA 257 Query 289 VTANGEERSRVWRCAEPLTEDATADRVRWQLDGWLNNRNARDRPTAAVTLLRLQAVETVS 348 VTANGEERSRVWRCAEPLTEDATADRVRWQLDGWLNNRNARDRPTAAVTLLRLQAVETVS Sbjct 258 VTANGEERSRVWRCAEPLTEDATADRVRWQLDGWLNNRNARDRPTAAVTLLRLQAVETVS 317 Query 349 ASEGLQLPLWGGLGEQDRLRARRALVRVQGLLGPEAVRVPVLSGGHGPAERITLTVLGLV 408 ASEGLQLPLWGGLGEQDRLRARRALVRVQGLLGPEAVRVPVLSGGHGPAERITLTVLGLV Sbjct 318 ASEGLQLPLWGGLGEQDRLRARRALVRVQGLLGPEAVRVPVLSGGHGPAERITLTVLGLV 377 Query 409 APEPVPQADPGQPWPGRLPDPSPAVLFDDPVDLLDAQGNPIRVTSRGMFSADPARLRVRG 468 APEPVPQADPGQPWPGRLPDPSPAVLFDDPVDLLDAQGNPIRVTSRGMFSADPARLRVRG Sbjct 378 APEPVPQADPGQPWPGRLPDPSPAVLFDDPVDLLDAQGNPIRVTSRGMFSADPARLRVRG 437 Query 469 RDDRLRWWAGPWPDDERWWDPDRASGRTARAQVLLDGDPGTALLLCYRQRRWYLEGSYE 527 RDDRLRWWAGPWPDDERWWDPDRASGRTARAQVLLDGDPGTALLLCYRQRRWYLEGSYE Sbjct 438 RDDRLRWWAGPWPDDERWWDPDRASGRTARAQVLLDGDPGTALLLCYRQRRWYLEGSYE 496 >gi|339296218|gb|AEJ48329.1| hypothetical protein CCDC5079_3140 [Mycobacterium tuberculosis CCDC5079] Length=584 Score = 829 bits (2141), Expect = 0.0, Method: Compositional matrix adjust. Identities = 458/461 (99%), Positives = 459/461 (99%), Gaps = 0/461 (0%) Query 1 VMASARVLAIWCMDWPAVAAAAAAGLSATAPVAVTLANRVIACSATARAAGVRRGLRRRE 60 +MASARVLAIWCMDWPAVAAAAAAGLSATAPVAVTLANRVIACSATARAAGVRRGLRRRE Sbjct 1 MMASARVLAIWCMDWPAVAAAAAAGLSATAPVAVTLANRVIACSATARAAGVRRGLRRRE 60 Query 61 AAARCPQLFIATADADRDARLFEGVIAAVDDLVPRAELLRPGLLVLPVRGPARFFGSEQM 120 AAARCPQLFIATADADRDARLFEGVIAAVDDLVPRAELLRPGLLVLPVRGPARFFGSEQM Sbjct 61 AAARCPQLFIATADADRDARLFEGVIAAVDDLVPRAELLRPGLLVLPVRGPARFFGSEQM 120 Query 121 AAERLIDAVAAAGAECQVGIADRLSTAVFAARAGRIVEPGGDARFLSLLSIRQLATEPSL 180 AAERLIDAVAAAGAECQVGIADRLSTAVFAARAGRIVEPGGDARFLSLLSIRQLATEPSL Sbjct 121 AAERLIDAVAAAGAECQVGIADRLSTAVFAARAGRIVEPGGDARFLSLLSIRQLATEPSL 180 Query 181 SGPGRDDLTDLLWRMGIRTIGQFAALSRTDVASRFGADAVAAHRFARGEPERAPCGREPP 240 SGPGRDDLTDLLWRMGIRTIGQFAALSRTDVASRFGADAVAAHRFARGEPERAPCGREPP Sbjct 181 SGPGRDDLTDLLWRMGIRTIGQFAALSRTDVASRFGADAVAAHRFARGEPERAPCGREPP 240 Query 241 PDLAAELACDPPIDRVDAAAFAGRSLAAELHRALMAAGVGCTRLAIHAVTANGEERSRVW 300 PDLAAELACDPPIDRVDAAAFAGRSLAAELHRALMAAGVGCTRLAIHAVTANGEERSRVW Sbjct 241 PDLAAELACDPPIDRVDAAAFAGRSLAAELHRALMAAGVGCTRLAIHAVTANGEERSRVW 300 Query 301 RCAEPLTEDATADRVRWQLDGWLNNRNARDRPTAAVTLLRLQAVETVSASEGLQLPLWGG 360 RCAEPLTEDATADRVRWQLDGWLNNRNARDRPTAAVTLLRLQAVETVSASEGLQLPLWGG Sbjct 301 RCAEPLTEDATADRVRWQLDGWLNNRNARDRPTAAVTLLRLQAVETVSASEGLQLPLWGG 360 Query 361 LGEQDRLRARRALVRVQGLLGPEAVRVPVLSGGHGPAERITLTVLGLVAPEPVPQADPGQ 420 LGEQDRLRARRALVRVQGLLGPEAVRVPVLSGGHGPAERITLTVLGLVAPEPVPQADPGQ Sbjct 361 LGEQDRLRARRALVRVQGLLGPEAVRVPVLSGGHGPAERITLTVLGLVAPEPVPQADPGQ 420 Query 421 PWPGRLPDPSPAVLFDDPVDLLDAQGNPIRVTSRGMFSADP 461 PWPGRLPDPSPAVLFDDPVDLLDAQGNPIRVTSRGMFS P Sbjct 421 PWPGRLPDPSPAVLFDDPVDLLDAQGNPIRVTSRGMFSGGP 461 >gi|308380683|ref|ZP_07669251.1| hypothetical protein TMKG_03741 [Mycobacterium tuberculosis SUMu011] gi|308360730|gb|EFP49581.1| hypothetical protein TMKG_03741 [Mycobacterium tuberculosis SUMu011] Length=820 Score = 820 bits (2117), Expect = 0.0, Method: Compositional matrix adjust. Identities = 414/414 (100%), Positives = 414/414 (100%), Gaps = 0/414 (0%) Query 114 FFGSEQMAAERLIDAVAAAGAECQVGIADRLSTAVFAARAGRIVEPGGDARFLSLLSIRQ 173 FFGSEQMAAERLIDAVAAAGAECQVGIADRLSTAVFAARAGRIVEPGGDARFLSLLSIRQ Sbjct 407 FFGSEQMAAERLIDAVAAAGAECQVGIADRLSTAVFAARAGRIVEPGGDARFLSLLSIRQ 466 Query 174 LATEPSLSGPGRDDLTDLLWRMGIRTIGQFAALSRTDVASRFGADAVAAHRFARGEPERA 233 LATEPSLSGPGRDDLTDLLWRMGIRTIGQFAALSRTDVASRFGADAVAAHRFARGEPERA Sbjct 467 LATEPSLSGPGRDDLTDLLWRMGIRTIGQFAALSRTDVASRFGADAVAAHRFARGEPERA 526 Query 234 PCGREPPPDLAAELACDPPIDRVDAAAFAGRSLAAELHRALMAAGVGCTRLAIHAVTANG 293 PCGREPPPDLAAELACDPPIDRVDAAAFAGRSLAAELHRALMAAGVGCTRLAIHAVTANG Sbjct 527 PCGREPPPDLAAELACDPPIDRVDAAAFAGRSLAAELHRALMAAGVGCTRLAIHAVTANG 586 Query 294 EERSRVWRCAEPLTEDATADRVRWQLDGWLNNRNARDRPTAAVTLLRLQAVETVSASEGL 353 EERSRVWRCAEPLTEDATADRVRWQLDGWLNNRNARDRPTAAVTLLRLQAVETVSASEGL Sbjct 587 EERSRVWRCAEPLTEDATADRVRWQLDGWLNNRNARDRPTAAVTLLRLQAVETVSASEGL 646 Query 354 QLPLWGGLGEQDRLRARRALVRVQGLLGPEAVRVPVLSGGHGPAERITLTVLGLVAPEPV 413 QLPLWGGLGEQDRLRARRALVRVQGLLGPEAVRVPVLSGGHGPAERITLTVLGLVAPEPV Sbjct 647 QLPLWGGLGEQDRLRARRALVRVQGLLGPEAVRVPVLSGGHGPAERITLTVLGLVAPEPV 706 Query 414 PQADPGQPWPGRLPDPSPAVLFDDPVDLLDAQGNPIRVTSRGMFSADPARLRVRGRDDRL 473 PQADPGQPWPGRLPDPSPAVLFDDPVDLLDAQGNPIRVTSRGMFSADPARLRVRGRDDRL Sbjct 707 PQADPGQPWPGRLPDPSPAVLFDDPVDLLDAQGNPIRVTSRGMFSADPARLRVRGRDDRL 766 Query 474 RWWAGPWPDDERWWDPDRASGRTARAQVLLDGDPGTALLLCYRQRRWYLEGSYE 527 RWWAGPWPDDERWWDPDRASGRTARAQVLLDGDPGTALLLCYRQRRWYLEGSYE Sbjct 767 RWWAGPWPDDERWWDPDRASGRTARAQVLLDGDPGTALLLCYRQRRWYLEGSYE 820 >gi|240167854|ref|ZP_04746513.1| hypothetical protein MkanA1_00960 [Mycobacterium kansasii ATCC 12478] Length=527 Score = 811 bits (2096), Expect = 0.0, Method: Compositional matrix adjust. Identities = 456/531 (86%), Positives = 481/531 (91%), Gaps = 10/531 (1%) Query 1 VMASARVLAIWCMDWPAVAAAAAAGLSATAPVAVTLANRVIACSATARAAGVRRGLRRRE 60 ++AS+RVLAIWCMDWPAVAAAAAAGL ATAPVAVTLANRVIACSAT RAAGVRRGLRRRE Sbjct 3 LVASSRVLAIWCMDWPAVAAAAAAGLPATAPVAVTLANRVIACSATGRAAGVRRGLRRRE 62 Query 61 AAARCPQLFIATADADRDARLFEGVIAAVDDLVPRAELLRPGLLVLPVRGPARFFGSEQM 120 AAARCPQL IATADADRDAR FEGVIAAVDDLVPRAE+LRPGLLVLPVRG ARFFGSEQ Sbjct 63 AAARCPQLHIATADADRDARFFEGVIAAVDDLVPRAEVLRPGLLVLPVRGAARFFGSEQQ 122 Query 121 AAERLIDAVAAAGAECQVGIADRLSTAVFAARAGRIVEPGGDARFLSLLSIRQLATEPSL 180 AAERLIDAVA AGAECQVGIAD LSTAV+AARAGR+V+PG DA+FLS LSIRQLATEPSL Sbjct 123 AAERLIDAVAVAGAECQVGIADELSTAVYAARAGRVVDPGQDAQFLSALSIRQLATEPSL 182 Query 181 SGPGRDDLTDLLWRMGIRTIGQFAALSRTDVASRFGADAVAAHRFARGEPERAPCGREPP 240 SGPGR++LTDLLWRMGIRTIGQFAALSRTD+ASRFGADAV AHRFARGEPER P GREPP Sbjct 183 SGPGREELTDLLWRMGIRTIGQFAALSRTDIASRFGADAVVAHRFARGEPERLPSGREPP 242 Query 241 PDLAAELACDPPIDRVDAAAFAGRSLAAELHRALMAAGVGCTRLAIHAVTANGEERSRVW 300 P+L A L C+PPIDR+DAAAFAGRSLA LH+ALMAAGVGCTRLAIHAVTANGEERSRVW Sbjct 243 PELDAVLHCEPPIDRIDAAAFAGRSLAGTLHQALMAAGVGCTRLAIHAVTANGEERSRVW 302 Query 301 RCAEPLTEDATADRVRWQLDGWLNNRNARDRPTAAVTLLRLQAVETVSASEGLQLPLWGG 360 RCAEPLTED TADRVRWQLDGWL NR ARDRPTA VT LRLQA+E VSA E LQLPLWGG Sbjct 303 RCAEPLTEDGTADRVRWQLDGWLTNRTARDRPTAPVTRLRLQAIEVVSA-EALQLPLWGG 361 Query 361 LGEQDRLRARRALVRVQGLLGPEAVRVPVLSGGHGPAERITLTVLGLVAPEPVPQADPGQ 420 LGE+DRLRARRALVRVQGLLGPEAV+VPVLSGG GPAERITLT LG EPVPQADP Q Sbjct 362 LGEEDRLRARRALVRVQGLLGPEAVQVPVLSGGRGPAERITLTPLG---DEPVPQADPNQ 418 Query 421 PWPGRLPDPSPAVLFDDPVDLLDAQGNPIRVTSRGMFSADPARLRVRGRDDRLRWWAGPW 480 PWPG+LP+PSPAVL DDPV+LLDAQGN +RVT RGMFSADPARL RGRDDRLRWWAGPW Sbjct 419 PWPGQLPEPSPAVLLDDPVELLDAQGNQVRVTGRGMFSADPARLTSRGRDDRLRWWAGPW 478 Query 481 PDDERWWD--PDRASG--RTARAQVLLDGDPGTALLLCYRQRRWYLEGSYE 527 P DERWWD P+ G RTARAQVLL+ + ALLLCYRQRRWYLEGSYE Sbjct 479 PVDERWWDDRPEAGQGGSRTARAQVLLEDE--RALLLCYRQRRWYLEGSYE 527 >gi|118616684|ref|YP_905016.1| hypothetical protein MUL_0916 [Mycobacterium ulcerans Agy99] gi|118568794|gb|ABL03545.1| conserved hypothetical protein [Mycobacterium ulcerans Agy99] Length=523 Score = 783 bits (2023), Expect = 0.0, Method: Compositional matrix adjust. Identities = 450/523 (87%), Positives = 475/523 (91%), Gaps = 6/523 (1%) Query 5 ARVLAIWCMDWPAVAAAAAAGLSATAPVAVTLANRVIACSATARAAGVRRGLRRREAAAR 64 +RVLAIWCMDWPAVAAAAAA TAPVAVTLANRVIACS+TARA GVRRGLRRREAAAR Sbjct 7 SRVLAIWCMDWPAVAAAAAADQPVTAPVAVTLANRVIACSSTARAVGVRRGLRRREAAAR 66 Query 65 CPQLFIATADADRDARLFEGVIAAVDDLVPRAELLRPGLLVLPVRGPARFFGSEQMAAER 124 CPQL IATADADRDAR FEGV+AAVDDLVPRAE+LRPGLLVLPVRG ARFFGSEQ AAER Sbjct 67 CPQLHIATADADRDARFFEGVVAAVDDLVPRAEVLRPGLLVLPVRGAARFFGSEQQAAER 126 Query 125 LIDAVAAAGAECQVGIADRLSTAVFAARAGRIVEPGGDARFLSLLSIRQLATEPSLSGPG 184 LIDAVAAAGAECQVGIADRLSTAVFAARAGR+VEPG DARFLS LS+RQLA EPSLSGPG Sbjct 127 LIDAVAAAGAECQVGIADRLSTAVFAARAGRVVEPGHDARFLSALSVRQLAAEPSLSGPG 186 Query 185 RDDLTDLLWRMGIRTIGQFAALSRTDVASRFGADAVAAHRFARGEPERAPCGREPPPDLA 244 RD+LTDLLWRMGIRT+GQFAALSRTDVASRFGADAVAAHRFARGEPER P G EPPP+L Sbjct 187 RDELTDLLWRMGIRTVGQFAALSRTDVASRFGADAVAAHRFARGEPERLPSGCEPPPELG 246 Query 245 AELACDPPIDRVDAAAFAGRSLAAELHRALMAAGVGCTRLAIHAVTANGEERSRVWRCAE 304 A L CDPPIDRVDAAAFAGR+LA+ELH+AL+AAGVGCTRLAIHAVT +GEER+RVWRCAE Sbjct 247 AVLRCDPPIDRVDAAAFAGRALASELHQALLAAGVGCTRLAIHAVTDSGEERTRVWRCAE 306 Query 305 PLTEDATADRVRWQLDGWLNNRNARDRPTAAVTLLRLQAVETVSASEGLQLPLWGGLGEQ 364 PLTE+ATADRVRWQLDGWL++RNARDRPTA VT LRLQA+E VSA E LQLPLWGGLGE+ Sbjct 307 PLTEEATADRVRWQLDGWLSSRNARDRPTAPVTQLRLQALEVVSA-EALQLPLWGGLGEE 365 Query 365 DRLRARRALVRVQGLLGPEAVRVPVLSGGHGPAERITLTVLGLVAPEPVPQADPGQPWPG 424 DRLRARRALVRVQGLLGPEAV+VPVLSGG GP ERITLT LG EPVPQADPGQPWPG Sbjct 366 DRLRARRALVRVQGLLGPEAVQVPVLSGGRGPTERITLTALG---DEPVPQADPGQPWPG 422 Query 425 RLPDPSPAVLFDDPVDLLDAQGNPIRVTSRGMFSADPARLRVRGRDDRLRWWAGPWPDDE 484 +LP PSPAVL DDPV+LLD QGNP+RVTSRGMFS PARL V GRDDRL WWAGPWP DE Sbjct 423 QLPAPSPAVLLDDPVELLDVQGNPVRVTSRGMFSTAPARLVVGGRDDRLHWWAGPWPVDE 482 Query 485 RWWDPDRASGRTARAQVLLDGDPGTALLLCYRQRRWYLEGSYE 527 RWWDPD GRTARAQVLL + ALLLCYRQRRWYLEGSYE Sbjct 483 RWWDPDLGKGRTARAQVLLGDE--RALLLCYRQRRWYLEGSYE 523 >gi|183981173|ref|YP_001849464.1| hypothetical protein MMAR_1151 [Mycobacterium marinum M] gi|183174499|gb|ACC39609.1| conserved hypothetical protein [Mycobacterium marinum M] Length=523 Score = 781 bits (2016), Expect = 0.0, Method: Compositional matrix adjust. Identities = 449/523 (86%), Positives = 475/523 (91%), Gaps = 6/523 (1%) Query 5 ARVLAIWCMDWPAVAAAAAAGLSATAPVAVTLANRVIACSATARAAGVRRGLRRREAAAR 64 +RVLAIWCMDWPAVAAAAAA TAPVAVTLANRVIACS+TARA GVRRGLRRREAAAR Sbjct 7 SRVLAIWCMDWPAVAAAAAADQPVTAPVAVTLANRVIACSSTARAVGVRRGLRRREAAAR 66 Query 65 CPQLFIATADADRDARLFEGVIAAVDDLVPRAELLRPGLLVLPVRGPARFFGSEQMAAER 124 CPQL IATADADRDAR FEGV+AAVDDLVPRAE+LRPGLLVLPVRG ARFFGSEQ AAER Sbjct 67 CPQLHIATADADRDARFFEGVVAAVDDLVPRAEVLRPGLLVLPVRGAARFFGSEQQAAER 126 Query 125 LIDAVAAAGAECQVGIADRLSTAVFAARAGRIVEPGGDARFLSLLSIRQLATEPSLSGPG 184 LIDAVAAAGAECQVGIADRLSTAVFAARAGR+VEPG DARFLS LS+RQLA EPSLSGPG Sbjct 127 LIDAVAAAGAECQVGIADRLSTAVFAARAGRVVEPGHDARFLSALSVRQLAAEPSLSGPG 186 Query 185 RDDLTDLLWRMGIRTIGQFAALSRTDVASRFGADAVAAHRFARGEPERAPCGREPPPDLA 244 RD+LTDLLWRMGIRT+GQFAALSRTDVASRFGADAVAAHRFARGEPER P G EPPP+L Sbjct 187 RDELTDLLWRMGIRTVGQFAALSRTDVASRFGADAVAAHRFARGEPERLPSGCEPPPELG 246 Query 245 AELACDPPIDRVDAAAFAGRSLAAELHRALMAAGVGCTRLAIHAVTANGEERSRVWRCAE 304 A L CDPPIDRVDAAAFAGR+LA+ELH+AL+AAGVGCTRLAIHAVT +GEER+RVWRCAE Sbjct 247 AVLRCDPPIDRVDAAAFAGRALASELHQALLAAGVGCTRLAIHAVTDSGEERTRVWRCAE 306 Query 305 PLTEDATADRVRWQLDGWLNNRNARDRPTAAVTLLRLQAVETVSASEGLQLPLWGGLGEQ 364 PLTE+ATADRVRWQLDGWL++RNARDRPTA VT LRLQA+E VSA E LQLPLWGGLGE+ Sbjct 307 PLTEEATADRVRWQLDGWLSSRNARDRPTAPVTQLRLQALEVVSA-EALQLPLWGGLGEE 365 Query 365 DRLRARRALVRVQGLLGPEAVRVPVLSGGHGPAERITLTVLGLVAPEPVPQADPGQPWPG 424 DRLRARRALVRVQGLLGPEAV+VPVLSGG GP ERITLT LG EPVPQADPG+PWPG Sbjct 366 DRLRARRALVRVQGLLGPEAVQVPVLSGGRGPTERITLTALG---DEPVPQADPGRPWPG 422 Query 425 RLPDPSPAVLFDDPVDLLDAQGNPIRVTSRGMFSADPARLRVRGRDDRLRWWAGPWPDDE 484 +LP PSPAVL DDPV+LLD QGNP+RVTSRGMFS PARL V GRDDRL WWAGPWP DE Sbjct 423 QLPAPSPAVLLDDPVELLDVQGNPVRVTSRGMFSTAPARLVVGGRDDRLHWWAGPWPVDE 482 Query 485 RWWDPDRASGRTARAQVLLDGDPGTALLLCYRQRRWYLEGSYE 527 RWWDPD GRTARAQVLL + ALLLCYRQRRWYLEGSYE Sbjct 483 RWWDPDLGKGRTARAQVLLGDE--RALLLCYRQRRWYLEGSYE 523 >gi|41409585|ref|NP_962421.1| hypothetical protein MAP3487c [Mycobacterium avium subsp. paratuberculosis K-10] gi|41398416|gb|AAS06037.1| hypothetical protein MAP_3487c [Mycobacterium avium subsp. paratuberculosis K-10] Length=527 Score = 778 bits (2008), Expect = 0.0, Method: Compositional matrix adjust. Identities = 442/530 (84%), Positives = 471/530 (89%), Gaps = 12/530 (2%) Query 3 ASARVLAIWCMDWPAVAAAAAAGLSATAPVAVTLANRVIACSATARAAGVRRGLRRREAA 62 + +RVLAIWCMDWPAVAAAAAA L ATAPVAVTLANRVIACS+ ARAAGVRRGLRRREAA Sbjct 5 SGSRVLAIWCMDWPAVAAAAAAELPATAPVAVTLANRVIACSSAARAAGVRRGLRRREAA 64 Query 63 ARCPQLFIATADADRDARLFEGVIAAVDDLVPRAELLRPGLLVLPVRGPARFFGSEQMAA 122 ARCPQL ++TADADRDAR FE VIAAVDDLVPRAE+LRPGLLVLPVRG AR+FGSE+ AA Sbjct 65 ARCPQLHVSTADADRDARFFEAVIAAVDDLVPRAEVLRPGLLVLPVRGAARYFGSEEAAA 124 Query 123 ERLIDAVAA---AGAECQVGIADRLSTAVFAARAGRIVEPGGDARFLSLLSIRQLATEPS 179 ERL+DAVA AGAECQVGIADRLSTAV AARAGRIVEPGGDA+FLS+LS+RQLATEPS Sbjct 125 ERLVDAVAVSSVAGAECQVGIADRLSTAVLAARAGRIVEPGGDAKFLSVLSVRQLATEPS 184 Query 180 LSGPGRDDLTDLLWRMGIRTIGQFAALSRTDVASRFGADAVAAHRFARGEPERAPCGREP 239 LSGPGR++LTDLLWRMGIRTIGQFAAL+R DVASRFGAD VAAHR ARGEPER P GREP Sbjct 185 LSGPGREELTDLLWRMGIRTIGQFAALARGDVASRFGADGVAAHRLARGEPERPPSGREP 244 Query 240 PPDLAAELACDPPIDRVDAAAFAGRSLAAELHRALMAAGVGCTRLAIHAVTANGEERSRV 299 P +L A L CDPPIDRVDAAAFAGRSLA LH+ALMAAGVGCTRLAIHA T +GEER RV Sbjct 245 PAELEAVLDCDPPIDRVDAAAFAGRSLAGTLHQALMAAGVGCTRLAIHAATGSGEERHRV 304 Query 300 WRCAEPLTEDATADRVRWQLDGWLNNRNARDRPTAAVTLLRLQAVETVSASEGLQLPLWG 359 WRCAEPLTEDATADRVRWQLDGWL+NR ARDRPTA VTLLRL+AVE VSA E LQLPLWG Sbjct 305 WRCAEPLTEDATADRVRWQLDGWLSNRTARDRPTAPVTLLRLRAVEVVSA-EALQLPLWG 363 Query 360 GLGEQDRLRARRALVRVQGLLGPEAVRVPVLSGGHGPAERITLTVLGLVAPEPVPQADPG 419 GLGE+DRLRARRALVRVQGLLGPEAV+VPV SGG GPAERITL LG EPVPQADP Sbjct 364 GLGEEDRLRARRALVRVQGLLGPEAVQVPVRSGGRGPAERITLIPLG---DEPVPQADPD 420 Query 420 QPWPGRLPDPSPAVLFDDPVDLLDAQGNPIRVTSRGMFSADPARLRVRGRDDRLRWWAGP 479 PWPGRLP+PSPAVL DDPV+LLDAQGNPIRV+SRG+FSADPARL V GR +RL WW GP Sbjct 421 LPWPGRLPEPSPAVLLDDPVELLDAQGNPIRVSSRGLFSADPARLVVHGRGERLCWWGGP 480 Query 480 WPDDERWWDPDRAS--GRTARAQVLLDGDPGTALLLCYRQRRWYLEGSYE 527 WP DERWWD DR GRTARAQVLL+ + ALLLCYRQRRWYLEGSYE Sbjct 481 WPVDERWWD-DRGQGGGRTARAQVLLESE--RALLLCYRQRRWYLEGSYE 527 >gi|254776774|ref|ZP_05218290.1| hypothetical protein MaviaA2_19206 [Mycobacterium avium subsp. avium ATCC 25291] Length=513 Score = 765 bits (1975), Expect = 0.0, Method: Compositional matrix adjust. Identities = 436/520 (84%), Positives = 463/520 (90%), Gaps = 12/520 (2%) Query 13 MDWPAVAAAAAAGLSATAPVAVTLANRVIACSATARAAGVRRGLRRREAAARCPQLFIAT 72 MDWPAVAAAAAA L ATAPVAVTLANRVIACS+ ARAAGVRRGLRRREAAARCPQL ++T Sbjct 1 MDWPAVAAAAAAELPATAPVAVTLANRVIACSSAARAAGVRRGLRRREAAARCPQLHVST 60 Query 73 ADADRDARLFEGVIAAVDDLVPRAELLRPGLLVLPVRGPARFFGSEQMAAERLIDAVAA- 131 ADADRDAR FE VIAAVDDLVPRAE+LRPGLLVLPVRG AR+FGSE+ AAERL+DAVA Sbjct 61 ADADRDARFFEAVIAAVDDLVPRAEVLRPGLLVLPVRGAARYFGSEEAAAERLVDAVAVS 120 Query 132 --AGAECQVGIADRLSTAVFAARAGRIVEPGGDARFLSLLSIRQLATEPSLSGPGRDDLT 189 AGAECQVGIADRLSTAV AARAGRIVEPGGDA+FLS+LS+RQLATEPSLSGPGR++LT Sbjct 121 SVAGAECQVGIADRLSTAVLAARAGRIVEPGGDAKFLSVLSVRQLATEPSLSGPGREELT 180 Query 190 DLLWRMGIRTIGQFAALSRTDVASRFGADAVAAHRFARGEPERAPCGREPPPDLAAELAC 249 DLLWRMGIRTIGQFAAL+R DVASRFGAD VAAHR ARGEPER P GREPP +L A L C Sbjct 181 DLLWRMGIRTIGQFAALARGDVASRFGADGVAAHRLARGEPERPPSGREPPAELEAVLDC 240 Query 250 DPPIDRVDAAAFAGRSLAAELHRALMAAGVGCTRLAIHAVTANGEERSRVWRCAEPLTED 309 DPPIDRVDAAAFAGRSLA LH+ALMAAGVGCTRLAIHAVT +GEER RVWRCAEPLTED Sbjct 241 DPPIDRVDAAAFAGRSLAGTLHQALMAAGVGCTRLAIHAVTGSGEERHRVWRCAEPLTED 300 Query 310 ATADRVRWQLDGWLNNRNARDRPTAAVTLLRLQAVETVSASEGLQLPLWGGLGEQDRLRA 369 ATADRVRWQLDGWL+NR ARDRPTA VTLLRL+AVE VSA E LQLPLWGGLGE+DRLRA Sbjct 301 ATADRVRWQLDGWLSNRTARDRPTAPVTLLRLRAVEVVSA-EALQLPLWGGLGEEDRLRA 359 Query 370 RRALVRVQGLLGPEAVRVPVLSGGHGPAERITLTVLGLVAPEPVPQADPGQPWPGRLPDP 429 RRALVRVQGLLGPEAVRVPV SGG GPAERITL LG EPVPQADP PWPGRLP+P Sbjct 360 RRALVRVQGLLGPEAVRVPVRSGGRGPAERITLIPLG---DEPVPQADPDLPWPGRLPEP 416 Query 430 SPAVLFDDPVDLLDAQGNPIRVTSRGMFSADPARLRVRGRDDRLRWWAGPWPDDERWWDP 489 SP+VL DDPV+LLDAQGNPIRV+SRG+FSADPARL V GR +RL WW GPWP DERWWD Sbjct 417 SPSVLLDDPVELLDAQGNPIRVSSRGLFSADPARLVVHGRGERLCWWGGPWPVDERWWD- 475 Query 490 DRAS--GRTARAQVLLDGDPGTALLLCYRQRRWYLEGSYE 527 DR GRTARAQVLL+ + ALLLCYRQRRWYLEGSYE Sbjct 476 DRGQGGGRTARAQVLLESE--RALLLCYRQRRWYLEGSYE 513 >gi|342861594|ref|ZP_08718241.1| hypothetical protein MCOL_22016 [Mycobacterium colombiense CECT 3035] gi|342131083|gb|EGT84372.1| hypothetical protein MCOL_22016 [Mycobacterium colombiense CECT 3035] Length=510 Score = 763 bits (1970), Expect = 0.0, Method: Compositional matrix adjust. Identities = 427/516 (83%), Positives = 458/516 (89%), Gaps = 7/516 (1%) Query 13 MDWPAVAAAAAAGLSATAPVAVTLANRVIACSATARAAGVRRGLRRREAAARCPQLFIAT 72 MDWPAVAAA AAGLSATAP+AVTLANRVIACS+ ARAAGVRRGLRRREAAARCPQL + T Sbjct 1 MDWPAVAAATAAGLSATAPIAVTLANRVIACSSAARAAGVRRGLRRREAAARCPQLHVTT 60 Query 73 ADADRDARLFEGVIAAVDDLVPRAELLRPGLLVLPVRGPARFFGSEQMAAERLIDAVAAA 132 ADADRDAR FE VIAAVDDLVPRAE+LRPGLLVLPVRG AR+FGSE AAERLIDAVA A Sbjct 61 ADADRDARFFEAVIAAVDDLVPRAEVLRPGLLVLPVRGAARYFGSEATAAERLIDAVAVA 120 Query 133 GAECQVGIADRLSTAVFAARAGRIVEPGGDARFLSLLSIRQLATEPSLSGPGRDDLTDLL 192 GAECQ G+AD+LSTAVFAARAGRI+EPGGDA+FLS+LSIRQLATEPSLSG GR++LTDLL Sbjct 121 GAECQAGVADQLSTAVFAARAGRIIEPGGDAKFLSVLSIRQLATEPSLSGTGREELTDLL 180 Query 193 WRMGIRTIGQFAALSRTDVASRFGADAVAAHRFARGEPERAPCGREPPPDLAAELACDPP 252 WRMGIRTIGQFAALSR+DVASRFGAD V AHR ARGEPER P GREPP +L A L CDPP Sbjct 181 WRMGIRTIGQFAALSRSDVASRFGADGVTAHRLARGEPERPPSGREPPAELEAVLDCDPP 240 Query 253 IDRVDAAAFAGRSLAAELHRALMAAGVGCTRLAIHAVTANGEERSRVWRCAEPLTEDATA 312 IDRVDAAAFAGRSLA LH+ LMAAGVGCTRLAIHAVT NGEE RVWRCAEPLTEDATA Sbjct 241 IDRVDAAAFAGRSLAGRLHQTLMAAGVGCTRLAIHAVTGNGEELHRVWRCAEPLTEDATA 300 Query 313 DRVRWQLDGWLNNRNARD-RPTAAVTLLRLQAVETVSASEGLQLPLWGGLGEQDRLRARR 371 DRVRWQLDGWL++R + RPTAAVTLLRL AVE VSA E LQLPLWGGLGE+DRLRARR Sbjct 301 DRVRWQLDGWLSSRTVHNPRPTAAVTLLRLGAVEVVSA-EALQLPLWGGLGEEDRLRARR 359 Query 372 ALVRVQGLLGPEAVRVPVLSGGHGPAERITLTVLGLVAPEPVPQADPGQPWPGRLPDPSP 431 ALVRVQGLLGPEAVRVPVLSGG GPAERITL LG EPVP+ADP PWPGRLP+PSP Sbjct 360 ALVRVQGLLGPEAVRVPVLSGGRGPAERITLIPLG---DEPVPRADPDPPWPGRLPEPSP 416 Query 432 AVLFDDPVDLLDAQGNPIRVTSRGMFSADPARLRVRGRDDRLRWWAGPWPDDERWWDPDR 491 AVL DDPV+LLDAQGNPIRVT RG+FSADPAR+ G D+RL WW+GPWP DERWWDP+ Sbjct 417 AVLLDDPVELLDAQGNPIRVTIRGLFSADPARMIGGGCDERLCWWSGPWPVDERWWDPEL 476 Query 492 ASGRTARAQVLLDGDPGTALLLCYRQRRWYLEGSYE 527 + GRTARAQVLL+ + ALLLCYRQRRWY+EGSYE Sbjct 477 SKGRTARAQVLLESE--RALLLCYRQRRWYVEGSYE 510 >gi|118463508|ref|YP_883480.1| hypothetical protein MAV_4344 [Mycobacterium avium 104] gi|118164795|gb|ABK65692.1| conserved hypothetical protein [Mycobacterium avium 104] Length=513 Score = 762 bits (1968), Expect = 0.0, Method: Compositional matrix adjust. Identities = 435/520 (84%), Positives = 462/520 (89%), Gaps = 12/520 (2%) Query 13 MDWPAVAAAAAAGLSATAPVAVTLANRVIACSATARAAGVRRGLRRREAAARCPQLFIAT 72 MDWPAVAAAAAA L ATAPVAVTLANRVIACS+ ARAAGVRRGLRRREAAARCPQL ++T Sbjct 1 MDWPAVAAAAAAELPATAPVAVTLANRVIACSSAARAAGVRRGLRRREAAARCPQLHVST 60 Query 73 ADADRDARLFEGVIAAVDDLVPRAELLRPGLLVLPVRGPARFFGSEQMAAERLIDAVAA- 131 ADADRDAR FE VIAAVDDLVPRAE+LRPGLLVLPVRG AR+FGSE+ AAERL+DAVA Sbjct 61 ADADRDARFFEAVIAAVDDLVPRAEVLRPGLLVLPVRGAARYFGSEEAAAERLVDAVAVS 120 Query 132 --AGAECQVGIADRLSTAVFAARAGRIVEPGGDARFLSLLSIRQLATEPSLSGPGRDDLT 189 AGAECQVGIADRLSTAV AARAGRIVEPGGDA+FLS+LS+RQLATEPSLSGPGR++LT Sbjct 121 SVAGAECQVGIADRLSTAVLAARAGRIVEPGGDAKFLSVLSVRQLATEPSLSGPGREELT 180 Query 190 DLLWRMGIRTIGQFAALSRTDVASRFGADAVAAHRFARGEPERAPCGREPPPDLAAELAC 249 DLLWRMGIRTIGQFAAL+R DVASRFGAD VAAHR ARGEPER P GREPP +L A L C Sbjct 181 DLLWRMGIRTIGQFAALARGDVASRFGADGVAAHRLARGEPERPPSGREPPAELEAVLDC 240 Query 250 DPPIDRVDAAAFAGRSLAAELHRALMAAGVGCTRLAIHAVTANGEERSRVWRCAEPLTED 309 DPPIDRVDAAAFAGRSLA LH+ALMAAGVGCTRLAIHAVT +GEER RVWRCAEPLTED Sbjct 241 DPPIDRVDAAAFAGRSLAGTLHQALMAAGVGCTRLAIHAVTGSGEERHRVWRCAEPLTED 300 Query 310 ATADRVRWQLDGWLNNRNARDRPTAAVTLLRLQAVETVSASEGLQLPLWGGLGEQDRLRA 369 ATADRVRWQLDGWL+NR ARDRPTA VTLLRL+AVE VSA E LQLPLWGGLGE+DRLRA Sbjct 301 ATADRVRWQLDGWLSNRTARDRPTAPVTLLRLRAVEVVSA-EALQLPLWGGLGEEDRLRA 359 Query 370 RRALVRVQGLLGPEAVRVPVLSGGHGPAERITLTVLGLVAPEPVPQADPGQPWPGRLPDP 429 RRALVRVQGLLGPEAV+VPV SGG GPAERITL LG EPVPQADP PWPGRLP+P Sbjct 360 RRALVRVQGLLGPEAVQVPVRSGGRGPAERITLIPLG---DEPVPQADPDLPWPGRLPEP 416 Query 430 SPAVLFDDPVDLLDAQGNPIRVTSRGMFSADPARLRVRGRDDRLRWWAGPWPDDERWWDP 489 SPAVL DDPV+LLDAQ NPIRV+SRG+FSADPARL V GR +RL WW GPWP DERWWD Sbjct 417 SPAVLLDDPVELLDAQNNPIRVSSRGLFSADPARLVVHGRGERLCWWGGPWPVDERWWD- 475 Query 490 DRAS--GRTARAQVLLDGDPGTALLLCYRQRRWYLEGSYE 527 DR GRTARAQVLL+ + ALLLCYRQRRWYLEGSYE Sbjct 476 DRGQGGGRTARAQVLLESE--RALLLCYRQRRWYLEGSYE 513 >gi|336459764|gb|EGO38680.1| nucleotidyltransferase/DNA polymerase involved in DNA repair [Mycobacterium avium subsp. paratuberculosis S397] Length=513 Score = 761 bits (1966), Expect = 0.0, Method: Compositional matrix adjust. Identities = 435/520 (84%), Positives = 462/520 (89%), Gaps = 12/520 (2%) Query 13 MDWPAVAAAAAAGLSATAPVAVTLANRVIACSATARAAGVRRGLRRREAAARCPQLFIAT 72 MDWPAVAAAAAA L ATAPVAVTLANRVIACS+ ARAAGVRRGLRRREAAARCPQL ++T Sbjct 1 MDWPAVAAAAAAELPATAPVAVTLANRVIACSSAARAAGVRRGLRRREAAARCPQLHVST 60 Query 73 ADADRDARLFEGVIAAVDDLVPRAELLRPGLLVLPVRGPARFFGSEQMAAERLIDAVAA- 131 ADADRDAR FE VIAAVDDLVPRAE+LRPGLLVLPVRG AR+FGSE+ AAERL+DAVA Sbjct 61 ADADRDARFFEAVIAAVDDLVPRAEVLRPGLLVLPVRGAARYFGSEEAAAERLVDAVAVS 120 Query 132 --AGAECQVGIADRLSTAVFAARAGRIVEPGGDARFLSLLSIRQLATEPSLSGPGRDDLT 189 AGAECQVGIADRLSTAV AARAGRIVEPGGDA+FLS+LS+RQLATEPSLSGPGR++LT Sbjct 121 SVAGAECQVGIADRLSTAVLAARAGRIVEPGGDAKFLSVLSVRQLATEPSLSGPGREELT 180 Query 190 DLLWRMGIRTIGQFAALSRTDVASRFGADAVAAHRFARGEPERAPCGREPPPDLAAELAC 249 DLLWRMGIRTIGQFAAL+R DVASRFGAD VAAHR ARGEPER P GREPP +L A L C Sbjct 181 DLLWRMGIRTIGQFAALARGDVASRFGADGVAAHRLARGEPERPPSGREPPAELEAVLDC 240 Query 250 DPPIDRVDAAAFAGRSLAAELHRALMAAGVGCTRLAIHAVTANGEERSRVWRCAEPLTED 309 DPPIDRVDAAAFAGRSLA LH+ALMAAGVGCTRLAIHA T +GEER RVWRCAEPLTED Sbjct 241 DPPIDRVDAAAFAGRSLAGTLHQALMAAGVGCTRLAIHAATGSGEERHRVWRCAEPLTED 300 Query 310 ATADRVRWQLDGWLNNRNARDRPTAAVTLLRLQAVETVSASEGLQLPLWGGLGEQDRLRA 369 ATADRVRWQLDGWL+NR ARDRPTA VTLLRL+AVE VSA E LQLPLWGGLGE+DRLRA Sbjct 301 ATADRVRWQLDGWLSNRTARDRPTAPVTLLRLRAVEVVSA-EALQLPLWGGLGEEDRLRA 359 Query 370 RRALVRVQGLLGPEAVRVPVLSGGHGPAERITLTVLGLVAPEPVPQADPGQPWPGRLPDP 429 RRALVRVQGLLGPEAV+VPV SGG GPAERITL LG EPVPQADP PWPGRLP+P Sbjct 360 RRALVRVQGLLGPEAVQVPVRSGGRGPAERITLIPLG---DEPVPQADPDLPWPGRLPEP 416 Query 430 SPAVLFDDPVDLLDAQGNPIRVTSRGMFSADPARLRVRGRDDRLRWWAGPWPDDERWWDP 489 SPAVL DDPV+LLDAQGNPIRV+SRG+FSADPARL V GR +RL WW GPWP DERWWD Sbjct 417 SPAVLLDDPVELLDAQGNPIRVSSRGLFSADPARLVVHGRGERLCWWGGPWPVDERWWD- 475 Query 490 DRAS--GRTARAQVLLDGDPGTALLLCYRQRRWYLEGSYE 527 DR GRTARAQVLL+ + ALLLCYRQRRWYLEGSYE Sbjct 476 DRGQGGGRTARAQVLLESE--RALLLCYRQRRWYLEGSYE 513 >gi|254822976|ref|ZP_05227977.1| hypothetical protein MintA_23814 [Mycobacterium intracellulare ATCC 13950] Length=518 Score = 759 bits (1960), Expect = 0.0, Method: Compositional matrix adjust. Identities = 439/525 (84%), Positives = 466/525 (89%), Gaps = 17/525 (3%) Query 13 MDWPAVAAAAAAGLSATAPVAVTLANRVIACSATARAAGVRRGLRRREAAARCPQLFIAT 72 MDWPAVAAAAAA L A+ PVAVTLANRV+ACS+ ARA GVRRGLRRREAAARCPQL + T Sbjct 1 MDWPAVAAAAAADLPASVPVAVTLANRVVACSSAARAVGVRRGLRRREAAARCPQLHVTT 60 Query 73 ADADRDARLFEGVIAAVDDLVPRAELLRPGLLVLPVRGPARFFGSEQMAAERLIDAVAAA 132 ADADRDAR FE VIAAVDDLVPRAE+LRPGLLVLPVRG AR+FGSE +AAERLIDAVAAA Sbjct 61 ADADRDARFFEAVIAAVDDLVPRAEVLRPGLLVLPVRGAARYFGSEAVAAERLIDAVAAA 120 Query 133 GAECQVGIADRLSTAVFAARAGRIVEPGGDARFLSLLSIRQLATEPSLSGPGRDDLTDLL 192 GAECQVGIAD+LSTAVFAARAGR+VEPGGDARFLS+LSIRQLATEPSLSGPGR++LTDLL Sbjct 121 GAECQVGIADQLSTAVFAARAGRVVEPGGDARFLSVLSIRQLATEPSLSGPGREELTDLL 180 Query 193 WRMGIRTIGQFAALSRTDVASRFGADAVAAHRFARGEPERAPCGREPPPDLAAELACDPP 252 WRMGIRTIGQFAALSR+DVASRFGAD V AHR ARGEPER P GREPP +L A L CDPP Sbjct 181 WRMGIRTIGQFAALSRSDVASRFGADGVTAHRLARGEPERPPSGREPPAELEAVLDCDPP 240 Query 253 IDRVDAAAFAGRSLAAELHRALMAAGVGCTRLAIHAVTANGEERSRVWRCAEPLTEDATA 312 IDRVDAAAFAGRSLA LH+ALMAAGVGCTRLAIHAVTANGEER RVWRCAEPLTEDATA Sbjct 241 IDRVDAAAFAGRSLAGTLHQALMAAGVGCTRLAIHAVTANGEERHRVWRCAEPLTEDATA 300 Query 313 DRVRWQLDGWLNNRNARD-RPTAAVTLLRLQAVETVSASEGLQLPLWGGLGEQDRLRARR 371 DRVRWQLDGWL+NR ARD RPTAAVTLLRLQAVE VSA E LQLPLWGGLGE+DRLRARR Sbjct 301 DRVRWQLDGWLSNRTARDPRPTAAVTLLRLQAVEVVSA-EALQLPLWGGLGEEDRLRARR 359 Query 372 ALVRVQGLLGPEAVRVPVLSGGHGPAERITLTVLGLVAPEPVPQADPGQPWPGRLPDPSP 431 ALVRVQGLLGPEAVRVPVLSGG GPAERITL LG EPVP+ADP PWPGRLP PSP Sbjct 360 ALVRVQGLLGPEAVRVPVLSGGRGPAERITLIPLG---GEPVPRADPDLPWPGRLPAPSP 416 Query 432 AVLFDDPVDLLDAQGNPIRVTSRGMFSADPARLRVRGRDDRLRWWAGPWPDDERWWDPDR 491 AVL DDPV+LLD QGNPIRVT+RG+FSADPAR+ +GRD+RL WWAGPWP DERWWD DR Sbjct 417 AVLLDDPVELLDTQGNPIRVTNRGLFSADPARMISQGRDERLCWWAGPWPVDERWWD-DR 475 Query 492 ---------ASGRTARAQVLLDGDPGTALLLCYRQRRWYLEGSYE 527 SGRTARAQ+LL+ + ALLLCYRQRRWYLEGSYE Sbjct 476 PVGGQGAGQGSGRTARAQILLESE--RALLLCYRQRRWYLEGSYE 518 >gi|333991856|ref|YP_004524470.1| hypothetical protein JDM601_3216 [Mycobacterium sp. JDM601] gi|333487824|gb|AEF37216.1| conserved hypothetical protein [Mycobacterium sp. JDM601] Length=529 Score = 749 bits (1935), Expect = 0.0, Method: Compositional matrix adjust. Identities = 428/532 (81%), Positives = 453/532 (86%), Gaps = 9/532 (1%) Query 2 MASARVLAIWCMDWPAVAAAAAAGLSATAPVAVTLANRVIACSATARAAGVRRGLRRREA 61 MA++RVLA+WCMDWPAVAAA AAGL ATAP+AVTLANRVIACSA ARAAGVRRGLRRREA Sbjct 1 MAASRVLALWCMDWPAVAAAVAAGLPATAPIAVTLANRVIACSAGARAAGVRRGLRRREA 60 Query 62 AARCPQLFIATADADRDARLFEGVIAAVDDLVPRAELLRPGLLVLPVRGPARFFGSEQMA 121 AARCP L + AD DRDARLFE V+AAVDDLVP AE+LRPGLLV+ VRG R FGSE+ A Sbjct 61 AARCPPLHVVAADTDRDARLFEPVLAAVDDLVPAAEVLRPGLLVVSVRGAVRAFGSEEQA 120 Query 122 AERLIDAVAAAGAECQVGIADRLSTAVFAARAGRIVEPGGDARFLSLLSIRQLATEPSLS 181 AERL+DAVAAA ECQVGIAD LS AV AARAG +V PGGDARFLS LSIRQLA EPSLS Sbjct 121 AERLVDAVAAADVECQVGIADGLSAAVLAARAGAVVPPGGDARFLSALSIRQLAAEPSLS 180 Query 182 GPGRDDLTDLLWRMGIRTIGQFAALSRTDVASRFGADAVAAHRFARGEPERAPCGREPPP 241 GPGRD L DLLWR+GIRTIGQFAAL R DV SRFG+DA+ AHRFARGEPER P GREP P Sbjct 181 GPGRDGLVDLLWRLGIRTIGQFAALPRPDVTSRFGSDALTAHRFARGEPERGPSGREPAP 240 Query 242 DLAAELACDPPIDRVDAAAFAGRSLAAELHRALMAAGVGCTRLAIHAVTANGEERSRVWR 301 DL A L CDPPIDRVDAAAFAGRSLA LHR LMAAGVGCTRLAIHAVTA G+E +RVWR Sbjct 241 DLDAVLHCDPPIDRVDAAAFAGRSLAGVLHRTLMAAGVGCTRLAIHAVTATGDELTRVWR 300 Query 302 CAEPLTEDATADRVRWQLDGWLNNRNARDRPTAAVTLLRLQAVETVSASEGLQLPLWGGL 361 CAEPLTEDATADRVRWQLDGWLN+R DRPT VTLLRLQ VE SA+E LQLPLWGGL Sbjct 301 CAEPLTEDATADRVRWQLDGWLNSRATSDRPTGPVTLLRLQPVEVASATEALQLPLWGGL 360 Query 362 GEQDRLRARRALVRVQGLLGPEAVRVPVLSGGHGPAERITLTVLGLVAPEPVPQADPGQP 421 GE+DRLRARRALVRVQGLLGPEAVRVPVLSGG GPAERITLT LG EPVP ADP QP Sbjct 361 GEEDRLRARRALVRVQGLLGPEAVRVPVLSGGRGPAERITLTPLG---DEPVPLADPRQP 417 Query 422 WPGRLPDPSPAVLFDDPVDLLDAQGNPIRVTSRGMFSADPARLRVRGRDDRLRWWAGPWP 481 WPGRLP+PSPAVL DDPV+LLDA+ NPIRVT RG+FSADP L RGRD+RLRWWAGPWP Sbjct 418 WPGRLPEPSPAVLLDDPVELLDAERNPIRVTGRGLFSADPVWLVARGRDERLRWWAGPWP 477 Query 482 DDERWWDPDR---ASGRTARAQVLLDGD---PGTALLLCYRQRRWYLEGSYE 527 DERWWDP R +GRTAR Q LLDG PG ALLLCYR RRWYLEGSYE Sbjct 478 VDERWWDPLREGPGAGRTARVQALLDGPAGAPGAALLLCYRLRRWYLEGSYE 529 >gi|289759554|ref|ZP_06518932.1| conserved hypothetical protein [Mycobacterium tuberculosis T85] gi|289715118|gb|EFD79130.1| conserved hypothetical protein [Mycobacterium tuberculosis T85] Length=384 Score = 745 bits (1924), Expect = 0.0, Method: Compositional matrix adjust. Identities = 381/384 (99%), Positives = 382/384 (99%), Gaps = 0/384 (0%) Query 144 LSTAVFAARAGRIVEPGGDARFLSLLSIRQLATEPSLSGPGRDDLTDLLWRMGIRTIGQF 203 +STAV ARAGRIVEPGGDARFLSLLSIRQLATEPSLSGPGRDDLTDLLWRMGIRTIGQF Sbjct 1 MSTAVNGARAGRIVEPGGDARFLSLLSIRQLATEPSLSGPGRDDLTDLLWRMGIRTIGQF 60 Query 204 AALSRTDVASRFGADAVAAHRFARGEPERAPCGREPPPDLAAELACDPPIDRVDAAAFAG 263 AALSRTDVASRFGADAVAAHRFARGEPERAPCGREPPPDLAAELACDPPIDRVDAAAFAG Sbjct 61 AALSRTDVASRFGADAVAAHRFARGEPERAPCGREPPPDLAAELACDPPIDRVDAAAFAG 120 Query 264 RSLAAELHRALMAAGVGCTRLAIHAVTANGEERSRVWRCAEPLTEDATADRVRWQLDGWL 323 RSLAAELHRALMAAGVGCTRLAIHAVTANGEERSRVWRCAEPLTEDATADRVRWQLDGWL Sbjct 121 RSLAAELHRALMAAGVGCTRLAIHAVTANGEERSRVWRCAEPLTEDATADRVRWQLDGWL 180 Query 324 NNRNARDRPTAAVTLLRLQAVETVSASEGLQLPLWGGLGEQDRLRARRALVRVQGLLGPE 383 NNRNARDRPTAAVTLLRLQAVETVSASEGLQLPLWGGLGEQDRLRARRALVRVQGLLGPE Sbjct 181 NNRNARDRPTAAVTLLRLQAVETVSASEGLQLPLWGGLGEQDRLRARRALVRVQGLLGPE 240 Query 384 AVRVPVLSGGHGPAERITLTVLGLVAPEPVPQADPGQPWPGRLPDPSPAVLFDDPVDLLD 443 AVRVPVLSGGHGPAERITLTVLGLVAPEPVPQADPGQPWPGRLPDPSPAVLFDDPVDLLD Sbjct 241 AVRVPVLSGGHGPAERITLTVLGLVAPEPVPQADPGQPWPGRLPDPSPAVLFDDPVDLLD 300 Query 444 AQGNPIRVTSRGMFSADPARLRVRGRDDRLRWWAGPWPDDERWWDPDRASGRTARAQVLL 503 AQGNPIRVTSRGMFSADPARLRVRGRDDRLRWWAGPWPDDERWWDPDRASGRTARAQVLL Sbjct 301 AQGNPIRVTSRGMFSADPARLRVRGRDDRLRWWAGPWPDDERWWDPDRASGRTARAQVLL 360 Query 504 DGDPGTALLLCYRQRRWYLEGSYE 527 DGDPGTALLLCYRQRRWYLEGSYE Sbjct 361 DGDPGTALLLCYRQRRWYLEGSYE 384 >gi|108798146|ref|YP_638343.1| hypothetical protein Mmcs_1175 [Mycobacterium sp. MCS] gi|108768565|gb|ABG07287.1| conserved hypothetical protein [Mycobacterium sp. MCS] Length=532 Score = 741 bits (1912), Expect = 0.0, Method: Compositional matrix adjust. Identities = 417/525 (80%), Positives = 455/525 (87%), Gaps = 5/525 (0%) Query 4 SARVLAIWCMDWPAVAAAAAAGLSATAPVAVTLANRVIACSATARAAGVRRGLRRREAAA 63 +ARVLA+WCMDWPAVAAAAAA L TAPVAVTLANRVIACSA+ARAAGVRRGLRRRE+ A Sbjct 12 AARVLAVWCMDWPAVAAAAAAHLPPTAPVAVTLANRVIACSASARAAGVRRGLRRRESQA 71 Query 64 RCPQLFIATADADRDARLFEGVIAAVDDLVPRAELLRPGLLVLPVRGPARFFGSEQMAAE 123 RCP L +A AD RDAR FE V AAVDDLVPRAE+LRPGLLV+ VRG AR+FGSEQ AAE Sbjct 72 RCPHLHVAAADPARDARHFENVTAAVDDLVPRAEVLRPGLLVMAVRGAARYFGSEQAAAE 131 Query 124 RLIDAVAAAGAECQVGIADRLSTAVFAARAGRIVEPGGDARFLSLLSIRQLATEPSLSGP 183 RL+DAVAAAG ECQVGIAD+L TAVFAAR GRIV PG DA FLS LSIRQLATEPSL+ P Sbjct 132 RLVDAVAAAGVECQVGIADQLPTAVFAAREGRIVAPGEDAGFLSALSIRQLATEPSLAAP 191 Query 184 GRDDLTDLLWRMGIRTIGQFAALSRTDVASRFGADAVAAHRFARGEPERAPCGREPPPDL 243 GR++L DLLWRMGIRTIGQF+ALSRTDVASRFGADAVAAHRFARGEP R P GREPP +L Sbjct 192 GREELADLLWRMGIRTIGQFSALSRTDVASRFGADAVAAHRFARGEPARGPSGREPPAEL 251 Query 244 AAELACDPPIDRVDAAAFAGRSLAAELHRALMAAGVGCTRLAIHAVTANGEERSRVWRCA 303 A + CDPPIDRVDAAAFAGRSLA +LHR+L +AGVGCTRLAIHAVT +G+E RVWRCA Sbjct 252 DAVMNCDPPIDRVDAAAFAGRSLAGQLHRSLESAGVGCTRLAIHAVTEDGKELERVWRCA 311 Query 304 EPLTEDATADRVRWQLDGWLNNRNARDRPTAAVTLLRLQAVETVSASEGLQLPLWGGLGE 363 EPLTEDATADRVRWQLDGWLN RN +DRPTA +T+LRL+ VE +SA E LQLPLWGG+GE Sbjct 312 EPLTEDATADRVRWQLDGWLNRRNPQDRPTAPITVLRLRPVEVISA-EALQLPLWGGVGE 370 Query 364 QDRLRARRALVRVQGLLGPEAVRVPVLSGGHGPAERITLTVLGLVAPEPVPQADPGQPWP 423 +DRLRARRALVRVQGLLGPEAV+VPVLSGG GPAERIT T G EPVPQADP QPWP Sbjct 371 EDRLRARRALVRVQGLLGPEAVQVPVLSGGRGPAERITFTAFG---DEPVPQADPRQPWP 427 Query 424 GRLPDPSPAVLFDDPVDLLDAQGNPIRVTSRGMFSADPARLRVRGRDDRLRWWAGPWPDD 483 G+LP+PSPAVL DDPV++LDA+GNP+RVT RG+FS PARL G L WWAGPWP D Sbjct 428 GQLPEPSPAVLLDDPVEVLDAEGNPVRVTHRGLFSGPPARLDGGGYRGDLAWWAGPWPVD 487 Query 484 ERWWDPDRASGRTARAQVLLDGDPGT-ALLLCYRQRRWYLEGSYE 527 ERWWDPDRA GRTARAQVLLDG G ALLLCYRQRRWY+EG+YE Sbjct 488 ERWWDPDRAKGRTARAQVLLDGSKGQAALLLCYRQRRWYVEGAYE 532 >gi|119867242|ref|YP_937194.1| hypothetical protein Mkms_1192 [Mycobacterium sp. KMS] gi|126433805|ref|YP_001069496.1| hypothetical protein Mjls_1202 [Mycobacterium sp. JLS] gi|119693331|gb|ABL90404.1| conserved hypothetical protein [Mycobacterium sp. KMS] gi|126233605|gb|ABN97005.1| conserved hypothetical protein [Mycobacterium sp. JLS] Length=529 Score = 740 bits (1911), Expect = 0.0, Method: Compositional matrix adjust. Identities = 417/525 (80%), Positives = 455/525 (87%), Gaps = 5/525 (0%) Query 4 SARVLAIWCMDWPAVAAAAAAGLSATAPVAVTLANRVIACSATARAAGVRRGLRRREAAA 63 +ARVLA+WCMDWPAVAAAAAA L TAPVAVTLANRVIACSA+ARAAGVRRGLRRRE+ A Sbjct 9 AARVLAVWCMDWPAVAAAAAAHLPPTAPVAVTLANRVIACSASARAAGVRRGLRRRESQA 68 Query 64 RCPQLFIATADADRDARLFEGVIAAVDDLVPRAELLRPGLLVLPVRGPARFFGSEQMAAE 123 RCP L +A AD RDAR FE V AAVDDLVPRAE+LRPGLLV+ VRG AR+FGSEQ AAE Sbjct 69 RCPHLHVAAADPARDARHFENVTAAVDDLVPRAEVLRPGLLVMAVRGAARYFGSEQAAAE 128 Query 124 RLIDAVAAAGAECQVGIADRLSTAVFAARAGRIVEPGGDARFLSLLSIRQLATEPSLSGP 183 RL+DAVAAAG ECQVGIAD+L TAVFAAR GRIV PG DA FLS LSIRQLATEPSL+ P Sbjct 129 RLVDAVAAAGVECQVGIADQLPTAVFAAREGRIVAPGEDAGFLSALSIRQLATEPSLAAP 188 Query 184 GRDDLTDLLWRMGIRTIGQFAALSRTDVASRFGADAVAAHRFARGEPERAPCGREPPPDL 243 GR++L DLLWRMGIRTIGQF+ALSRTDVASRFGADAVAAHRFARGEP R P GREPP +L Sbjct 189 GREELADLLWRMGIRTIGQFSALSRTDVASRFGADAVAAHRFARGEPARGPSGREPPAEL 248 Query 244 AAELACDPPIDRVDAAAFAGRSLAAELHRALMAAGVGCTRLAIHAVTANGEERSRVWRCA 303 A + CDPPIDRVDAAAFAGRSLA +LHR+L +AGVGCTRLAIHAVT +G+E RVWRCA Sbjct 249 DAVMNCDPPIDRVDAAAFAGRSLAGQLHRSLESAGVGCTRLAIHAVTEDGKELERVWRCA 308 Query 304 EPLTEDATADRVRWQLDGWLNNRNARDRPTAAVTLLRLQAVETVSASEGLQLPLWGGLGE 363 EPLTEDATADRVRWQLDGWLN RN +DRPTA +T+LRL+ VE +SA E LQLPLWGG+GE Sbjct 309 EPLTEDATADRVRWQLDGWLNRRNPQDRPTAPITVLRLRPVEVISA-EALQLPLWGGVGE 367 Query 364 QDRLRARRALVRVQGLLGPEAVRVPVLSGGHGPAERITLTVLGLVAPEPVPQADPGQPWP 423 +DRLRARRALVRVQGLLGPEAV+VPVLSGG GPAERIT T G EPVPQADP QPWP Sbjct 368 EDRLRARRALVRVQGLLGPEAVQVPVLSGGRGPAERITFTAFG---DEPVPQADPRQPWP 424 Query 424 GRLPDPSPAVLFDDPVDLLDAQGNPIRVTSRGMFSADPARLRVRGRDDRLRWWAGPWPDD 483 G+LP+PSPAVL DDPV++LDA+GNP+RVT RG+FS PARL G L WWAGPWP D Sbjct 425 GQLPEPSPAVLLDDPVEVLDAEGNPVRVTHRGLFSGPPARLDGGGYRGDLAWWAGPWPVD 484 Query 484 ERWWDPDRASGRTARAQVLLDGDPGT-ALLLCYRQRRWYLEGSYE 527 ERWWDPDRA GRTARAQVLLDG G ALLLCYRQRRWY+EG+YE Sbjct 485 ERWWDPDRAKGRTARAQVLLDGSKGQAALLLCYRQRRWYVEGAYE 529 >gi|120402532|ref|YP_952361.1| hypothetical protein Mvan_1523 [Mycobacterium vanbaalenii PYR-1] gi|119955350|gb|ABM12355.1| conserved hypothetical protein [Mycobacterium vanbaalenii PYR-1] Length=522 Score = 717 bits (1851), Expect = 0.0, Method: Compositional matrix adjust. Identities = 409/525 (78%), Positives = 441/525 (84%), Gaps = 5/525 (0%) Query 4 SARVLAIWCMDWPAVAAAAAAGLSATAPVAVTLANRVIACSATARAAGVRRGLRRREAAA 63 +RVLA+WCMDWPAVAAAAAA L T PVAVTLANRVIACSA ARA GVRRGLRRRE+ A Sbjct 2 QSRVLALWCMDWPAVAAAAAADLPPTVPVAVTLANRVIACSAAARAVGVRRGLRRRESQA 61 Query 64 RCPQLFIATADADRDARLFEGVIAAVDDLVPRAELLRPGLLVLPVRGPARFFGSEQMAAE 123 RCP L + TAD RDAR FE V AAVDDLVPRAE+LRPGLL L VRG AR+FGSEQ AAE Sbjct 62 RCPGLHVVTADPARDARHFENVTAAVDDLVPRAEVLRPGLLALSVRGAARYFGSEQTAAE 121 Query 124 RLIDAVAAAGAECQVGIADRLSTAVFAARAGRIVEPGGDARFLSLLSIRQLATEPSLSGP 183 RL+DAVAA GAECQVG+AD+L TAVFAARAGRI++ G DA FLS LSIRQLA EPSL+ Sbjct 122 RLVDAVAAVGAECQVGVADQLPTAVFAARAGRIIDAGEDAAFLSGLSIRQLAAEPSLAPA 181 Query 184 GRDDLTDLLWRMGIRTIGQFAALSRTDVASRFGADAVAAHRFARGEPERAPCGREPPPDL 243 R+ LTDLLWRMGIRTIGQFA LSR+DVASRFGADAVAAHR ARGEP R P GREP +L Sbjct 182 PREALTDLLWRMGIRTIGQFAELSRSDVASRFGADAVAAHRIARGEPGRGPSGREPEAEL 241 Query 244 AAELACDPPIDRVDAAAFAGRSLAAELHRALMAAGVGCTRLAIHAVTANGEERSRVWRCA 303 A L CDPP+DRVDAAAFAGRSLA ELHR+L AAGVGCTRLAIHAVTA G+E RVWRCA Sbjct 242 DAVLNCDPPVDRVDAAAFAGRSLAGELHRSLEAAGVGCTRLAIHAVTATGQELERVWRCA 301 Query 304 EPLTEDATADRVRWQLDGWLNNRNARDRPTAAVTLLRLQAVETVSASEGLQLPLWGGLGE 363 EPLTEDATADRVRWQLDGWLN RN +DRP A +T+LRL+ VE VSA E LQLPLWGG+GE Sbjct 302 EPLTEDATADRVRWQLDGWLNRRNPQDRPAAPITVLRLRPVEVVSA-EALQLPLWGGVGE 360 Query 364 QDRLRARRALVRVQGLLGPEAVRVPVLSGGHGPAERITLTVLGLVAPEPVPQADPGQPWP 423 +DRLRARRALVRVQGLLGPEAV+VPVLSGG GPAERIT T LG E VPQADPGQPWP Sbjct 361 EDRLRARRALVRVQGLLGPEAVKVPVLSGGRGPAERITFTPLG---DELVPQADPGQPWP 417 Query 424 GRLPDPSPAVLFDDPVDLLDAQGNPIRVTSRGMFSADPARLRVRGRDDRLRWWAGPWPDD 483 GRLP+PSP VL DDPV+L DA+GNP+RVT RG+FS DP RL GR RL WWAGPWP D Sbjct 418 GRLPEPSPTVLLDDPVELFDAEGNPVRVTGRGLFSTDPVRLHAPGRSGRLSWWAGPWPVD 477 Query 484 ERWWDPDRA-SGRTARAQVLLDGDPGTALLLCYRQRRWYLEGSYE 527 ERWWD A +GRTARAQVLL DP ALLLCYR+RRWYLEG YE Sbjct 478 ERWWDAAPAKTGRTARAQVLLGADPAQALLLCYRRRRWYLEGVYE 522 >gi|118473914|ref|YP_885998.1| DNA repair polymerase [Mycobacterium smegmatis str. MC2 155] gi|118175201|gb|ABK76097.1| putative DNA repair polymerase [Mycobacterium smegmatis str. MC2 155] Length=525 Score = 716 bits (1848), Expect = 0.0, Method: Compositional matrix adjust. Identities = 416/526 (80%), Positives = 452/526 (86%), Gaps = 8/526 (1%) Query 5 ARVLAIWCMDWPAVAAAAAAGLSATAPVAVTLANRVIACSATARAAGVRRGLRRREAAAR 64 +RVLA+WCMDWPAVAAA AAGL TAP+AVTLANRVIACSA ARAAGVRRGLRRREA AR Sbjct 5 SRVLALWCMDWPAVAAAGAAGLPPTAPIAVTLANRVIACSAAARAAGVRRGLRRREAQAR 64 Query 65 CPQLFIATADADRDARLFEGVIAAVDDLVPRAELLRPGLLVLPVRGPARFFGSEQMAAER 124 CP L + TAD RDAR FE V AAVD+LVPRAE+LRPGLLVL VRG AR+FGSE AAER Sbjct 65 CPDLHVVTADPARDARHFERVTAAVDELVPRAEVLRPGLLVLSVRGAARYFGSEDAAAER 124 Query 125 LIDAVAAAGAECQVGIADRLSTAVFAARAGRIVEPGGDARFLSLLSIRQLATEPSLSGPG 184 L+DAVAA G ECQVGIAD+LSTAVFAARAGRI+ PG DA FLS LSIRQLATEP+L+ P Sbjct 125 LVDAVAATGVECQVGIADQLSTAVFAARAGRIIAPGEDASFLSDLSIRQLATEPALAAPD 184 Query 185 RDDLTDLLWRMGIRTIGQFAALSRTDVASRFGADAVAAHRFARGEPERAPCGREPPPDLA 244 RD L DLLWRMGIRT+GQFAALSRTDVASRFGADAV AHRFARGEP RAP GR+P +L Sbjct 185 RDALADLLWRMGIRTLGQFAALSRTDVASRFGADAVVAHRFARGEPARAPSGRDPAAELD 244 Query 245 AELACDPPIDRVDAAAFAGRSLAAELHRALMAAGVGCTRLAIHAVTANGEERSRVWRCAE 304 A L CDPPI+RVDAAAFAGRSLA LHR+L AAGVGCTRLAIHAVTANGE+ RVWRCAE Sbjct 245 AVLDCDPPIERVDAAAFAGRSLAVTLHRSLEAAGVGCTRLAIHAVTANGEQLERVWRCAE 304 Query 305 PLTEDATADRVRWQLDGWLNNRNARDRPTAAVTLLRLQAVETVSASEGLQLPLWGGLGEQ 364 PLTEDATADRVRWQLDGWLN R DRP+A +T+LRL+ VE VS S LQLPLWGG+GE+ Sbjct 305 PLTEDATADRVRWQLDGWLNRRT-DDRPSAPITVLRLRPVEVVS-SAALQLPLWGGIGEE 362 Query 365 DRLRARRALVRVQGLLGPEAVRVPVLSGGHGPAERITLTVLGLVAPEPVPQADPGQPWPG 424 DRLRARRALVRVQGLLGPEAV+VPVLSGG GPAERIT T LG EPVPQADP QPWPG Sbjct 363 DRLRARRALVRVQGLLGPEAVQVPVLSGGRGPAERITFTALG---DEPVPQADPRQPWPG 419 Query 425 RLPDPSPAVLFDDPVDLLDAQGNPIRVTSRGMFSADPARLRVRG-RDDRLRWWAGPWPDD 483 +LP+PSP VL DDPV+LLDAQGNP+RV SRG+FS+DP+RL G RD LRWWAGPWP D Sbjct 420 QLPEPSPTVLLDDPVELLDAQGNPVRVNSRGLFSSDPSRLSGAGKRDGVLRWWAGPWPVD 479 Query 484 ERWWDP-DRASGRTARAQVLL-DGDPGTALLLCYRQRRWYLEGSYE 527 ERWWDP +R +GRTARAQVLL DG+ ALLLCYRQRRWYLEG+YE Sbjct 480 ERWWDPQNRGTGRTARAQVLLGDGEDALALLLCYRQRRWYLEGAYE 525 >gi|289555669|ref|ZP_06444879.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 605] gi|289440301|gb|EFD22794.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 605] Length=362 Score = 710 bits (1832), Expect = 0.0, Method: Compositional matrix adjust. Identities = 361/362 (99%), Positives = 362/362 (100%), Gaps = 0/362 (0%) Query 166 LSLLSIRQLATEPSLSGPGRDDLTDLLWRMGIRTIGQFAALSRTDVASRFGADAVAAHRF 225 +SLLSIRQLATEPSLSGPGRDDLTDLLWRMGIRTIGQFAALSRTDVASRFGADAVAAHRF Sbjct 1 MSLLSIRQLATEPSLSGPGRDDLTDLLWRMGIRTIGQFAALSRTDVASRFGADAVAAHRF 60 Query 226 ARGEPERAPCGREPPPDLAAELACDPPIDRVDAAAFAGRSLAAELHRALMAAGVGCTRLA 285 ARGEPERAPCGREPPPDLAAELACDPPIDRVDAAAFAGRSLAAELHRALMAAGVGCTRLA Sbjct 61 ARGEPERAPCGREPPPDLAAELACDPPIDRVDAAAFAGRSLAAELHRALMAAGVGCTRLA 120 Query 286 IHAVTANGEERSRVWRCAEPLTEDATADRVRWQLDGWLNNRNARDRPTAAVTLLRLQAVE 345 IHAVTANGEERSRVWRCAEPLTEDATADRVRWQLDGWLNNRNARDRPTAAVTLLRLQAVE Sbjct 121 IHAVTANGEERSRVWRCAEPLTEDATADRVRWQLDGWLNNRNARDRPTAAVTLLRLQAVE 180 Query 346 TVSASEGLQLPLWGGLGEQDRLRARRALVRVQGLLGPEAVRVPVLSGGHGPAERITLTVL 405 TVSASEGLQLPLWGGLGEQDRLRARRALVRVQGLLGPEAVRVPVLSGGHGPAERITLTVL Sbjct 181 TVSASEGLQLPLWGGLGEQDRLRARRALVRVQGLLGPEAVRVPVLSGGHGPAERITLTVL 240 Query 406 GLVAPEPVPQADPGQPWPGRLPDPSPAVLFDDPVDLLDAQGNPIRVTSRGMFSADPARLR 465 GLVAPEPVPQADPGQPWPGRLPDPSPAVLFDDPVDLLDAQGNPIRVTSRGMFSADPARLR Sbjct 241 GLVAPEPVPQADPGQPWPGRLPDPSPAVLFDDPVDLLDAQGNPIRVTSRGMFSADPARLR 300 Query 466 VRGRDDRLRWWAGPWPDDERWWDPDRASGRTARAQVLLDGDPGTALLLCYRQRRWYLEGS 525 VRGRDDRLRWWAGPWPDDERWWDPDRASGRTARAQVLLDGDPGTALLLCYRQRRWYLEGS Sbjct 301 VRGRDDRLRWWAGPWPDDERWWDPDRASGRTARAQVLLDGDPGTALLLCYRQRRWYLEGS 360 Query 526 YE 527 YE Sbjct 361 YE 362 >gi|296168803|ref|ZP_06850485.1| probable DNA repair polymerase [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295896506|gb|EFG76153.1| probable DNA repair polymerase [Mycobacterium parascrofulaceum ATCC BAA-614] Length=469 Score = 699 bits (1805), Expect = 0.0, Method: Compositional matrix adjust. Identities = 388/475 (82%), Positives = 412/475 (87%), Gaps = 14/475 (2%) Query 61 AAARCPQLFIATADADRDARLFEGVIAAVDDLVPRAELLRPGLLVLPVRGPARFFGSEQM 120 AAARCPQL + AD DRDAR FE V+AAVDDLVPRAE+LRPGLLVLPVRG AR+FGSE Sbjct 1 AAARCPQLHVGAADTDRDARHFEAVVAAVDDLVPRAEVLRPGLLVLPVRGAARYFGSEAD 60 Query 121 AAERLIDAVAA---AGAECQVGIADRLSTAVFAARAGRIVEPGGDARFLSLLSIRQLATE 177 AAERLIDAVA AGAECQVGIADRLSTAVFAARAGRIV GGDA+FLS LSIRQLATE Sbjct 61 AAERLIDAVAVSSLAGAECQVGIADRLSTAVFAARAGRIVPAGGDAKFLSALSIRQLATE 120 Query 178 PSLSGPGRDDLTDLLWRMGIRTIGQFAALSRTDVASRFGADAVAAHRFARGEPERAPCGR 237 PSL GPGR++LTDLLWRMGIRTIGQFAALS TDVASRFGAD V AHR ARGE ER P GR Sbjct 121 PSLCGPGREELTDLLWRMGIRTIGQFAALSATDVASRFGADGVTAHRLARGEAERGPSGR 180 Query 238 EPPPDLAAELACDPPIDRVDAAAFAGRSLAAELHRALMAAGVGCTRLAIHAVTANGEERS 297 EPP +L A L CDPPIDRVDAAAFAGRSLA LHR LMAAGVGCTRLAIHAVTANGEE Sbjct 181 EPPEELEAVLDCDPPIDRVDAAAFAGRSLAGALHRTLMAAGVGCTRLAIHAVTANGEELH 240 Query 298 RVWRCAEPLTEDATADRVRWQLDGWLNNRNARD-RPTAAVTLLRLQAVETVSASEGLQLP 356 RVWRCAEPLTEDATADRVRWQLDGWL++R AR+ RPTAAVTLLRLQAVE VSA LQLP Sbjct 241 RVWRCAEPLTEDATADRVRWQLDGWLSSRTARNPRPTAAVTLLRLQAVEVVSAG-ALQLP 299 Query 357 LWGGLGEQDRLRARRALVRVQGLLGPEAVRVPVLSGGHGPAERITLTVLGLVAPEPVPQA 416 LWGGLGE+DRLRARRALVRVQGLLGPEAVRVPVLSGG GPAERITLT LG E +P+A Sbjct 300 LWGGLGEEDRLRARRALVRVQGLLGPEAVRVPVLSGGRGPAERITLTPLG---DELLPRA 356 Query 417 DPGQPWPGRLPDPSPAVLFDDPVDLLDAQGNPIRVTSRGMFSADPARLRVRGRDDRLRWW 476 DPG PWPGRLP+PSPAVL DDPV++LDAQGNP+RVT+RG+FSADPARL V GRD+RL WW Sbjct 357 DPGLPWPGRLPEPSPAVLLDDPVEMLDAQGNPVRVTNRGLFSADPARLMVHGRDERLDWW 416 Query 477 AGPWPDDERWWDPDRASG----RTARAQVLLDGDPGTALLLCYRQRRWYLEGSYE 527 AGPWP DERWWD R +G RTARAQVLL+G+ A LLCYRQRRWYLEGSYE Sbjct 417 AGPWPVDERWWDDRRVAGQGGSRTARAQVLLEGE--RAFLLCYRQRRWYLEGSYE 469 >gi|315445828|ref|YP_004078707.1| hypothetical protein Mspyr1_43150 [Mycobacterium sp. Spyr1] gi|315264131|gb|ADU00873.1| hypothetical protein Mspyr1_43150 [Mycobacterium sp. Spyr1] Length=531 Score = 679 bits (1753), Expect = 0.0, Method: Compositional matrix adjust. Identities = 399/536 (75%), Positives = 437/536 (82%), Gaps = 18/536 (3%) Query 4 SARVLAIWCMDWPAVAAAAAAGLSATAPVAVTLANRVIACSATARAAGVRRGLRRREAAA 63 + RVLA+WCMDWPAVAA+AAA L T PVAVTLANRVIACSA ARAAGVRRGLRRRE+ A Sbjct 2 AGRVLALWCMDWPAVAASAAAELPPTTPVAVTLANRVIACSAAARAAGVRRGLRRRESQA 61 Query 64 RCPQLFIATADADRDARLFEGVIAAVDDLVPRAELLRPGLLVLPVRGPARFFGSEQMAAE 123 RCP+L +A AD RDAR FE V AVD+LVPRAE+LRPGLL L VRG AR+FGSE AAE Sbjct 62 RCPELHVAAADPARDARHFENVTLAVDELVPRAEVLRPGLLALSVRGAARYFGSEVAAAE 121 Query 124 RLIDAVAAAGAECQVGIADRLSTAVFAARAGRIVEPGGDARFLSLLSIRQLATEPSLSGP 183 RL+DAVAA GAECQVGIAD+L TAVFAAR GRI++PGGD FL+ LSIRQL+ EPSL+ Sbjct 122 RLVDAVAAVGAECQVGIADQLPTAVFAARMGRIIDPGGDGPFLAELSIRQLSGEPSLASA 181 Query 184 GRDDLTDLLWRMGIRTIGQFAALSRTDVASRFGADAVAAHRFARGEPERAPCGREPPPDL 243 R++L DLLWRMGIRTIGQFA LSR+DVASRFGAD V AHR ARGEP R P GREP +L Sbjct 182 SREELVDLLWRMGIRTIGQFAELSRSDVASRFGADGVTAHRIARGEPARGPSGREPEAEL 241 Query 244 AAELACDPPIDRVDAAAFAGRSLAAELHRALMAAGVGCTRLAIHAVTANGEERSRVWRCA 303 A + CDPPIDRVDAAAFAGRSLA LHR+L AAGVGCTRLAIHAVTANG+E RVWRCA Sbjct 242 DAVMNCDPPIDRVDAAAFAGRSLAGVLHRSLEAAGVGCTRLAIHAVTANGQELERVWRCA 301 Query 304 EPLTEDATADRVRWQLDGWLNNRN------------ARDRPTAAVTLLRLQAVETVSASE 351 EPLTEDATADRVRWQLDGWLN RN RP A +T+LRL+ VE VSA E Sbjct 302 EPLTEDATADRVRWQLDGWLNRRNPDRRAGAKRPGDGYGRPGAPITVLRLRPVEVVSA-E 360 Query 352 GLQLPLWGGLGEQDRLRARRALVRVQGLLGPEAVRVPVLSGGHGPAERITLTVLGLVAPE 411 LQLPLWGG+GEQDRLRARRALVRVQGLLGPEAV+VPVLSGG GPAERITLT G E Sbjct 361 ALQLPLWGGVGEQDRLRARRALVRVQGLLGPEAVKVPVLSGGRGPAERITLTPFG---DE 417 Query 412 PVPQADPGQPWPGRLPDPSPAVLFDDPVDLLDAQGNPIRVTSRGMFSADPARLRVRGRDD 471 VPQA+P QPWPGRLP+PSP VL DDPV+L DA+GNP+RVT RG+FSA+P+RL GR Sbjct 418 LVPQANPDQPWPGRLPEPSPTVLLDDPVELFDAEGNPVRVTGRGLFSAEPSRLHAPGRSG 477 Query 472 RLRWWAGPWPDDERWWDPDRASGRTARAQVLLDGDPGTALLLCYRQRRWYLEGSYE 527 +L WWAGPWP DERWWDP SGRTARAQVL+D ALLLCYRQRRWYLEG YE Sbjct 478 QLSWWAGPWPVDERWWDPSSKSGRTARAQVLIDET--QALLLCYRQRRWYLEGVYE 531 >gi|145225474|ref|YP_001136152.1| hypothetical protein Mflv_4898 [Mycobacterium gilvum PYR-GCK] gi|145217960|gb|ABP47364.1| conserved hypothetical protein [Mycobacterium gilvum PYR-GCK] Length=531 Score = 679 bits (1751), Expect = 0.0, Method: Compositional matrix adjust. Identities = 398/536 (75%), Positives = 437/536 (82%), Gaps = 18/536 (3%) Query 4 SARVLAIWCMDWPAVAAAAAAGLSATAPVAVTLANRVIACSATARAAGVRRGLRRREAAA 63 + RVLA+WCMDWPAVAA+AAA L T PVAVTLANRVIACSA ARAAGVRRGLRRRE+ A Sbjct 2 AGRVLALWCMDWPAVAASAAAELPPTTPVAVTLANRVIACSAAARAAGVRRGLRRRESQA 61 Query 64 RCPQLFIATADADRDARLFEGVIAAVDDLVPRAELLRPGLLVLPVRGPARFFGSEQMAAE 123 RCP+L +A AD RDAR FE V AVD+LVPRAE+LRPGLL L VRG AR+FGSE AAE Sbjct 62 RCPELHVAAADPARDARHFENVTLAVDELVPRAEVLRPGLLALSVRGAARYFGSEVAAAE 121 Query 124 RLIDAVAAAGAECQVGIADRLSTAVFAARAGRIVEPGGDARFLSLLSIRQLATEPSLSGP 183 RL+DAVAA GAECQVGIAD+L TAVFAAR GRI++PGGD FL+ LSIRQL+ EPSL+ Sbjct 122 RLVDAVAAVGAECQVGIADQLPTAVFAARVGRIIDPGGDGPFLAELSIRQLSGEPSLASA 181 Query 184 GRDDLTDLLWRMGIRTIGQFAALSRTDVASRFGADAVAAHRFARGEPERAPCGREPPPDL 243 R++L DLLWRMGIRTIGQFA LSR+DVASRFGAD V AHR ARGEP R P GREP +L Sbjct 182 SREELVDLLWRMGIRTIGQFAELSRSDVASRFGADGVTAHRIARGEPARGPSGREPEAEL 241 Query 244 AAELACDPPIDRVDAAAFAGRSLAAELHRALMAAGVGCTRLAIHAVTANGEERSRVWRCA 303 A + CDPPIDRVDAAAFAGRSLA LHR+L AAGVGCTRLAIHA+TANG+E RVWRCA Sbjct 242 DAVMNCDPPIDRVDAAAFAGRSLAGVLHRSLEAAGVGCTRLAIHAMTANGQELERVWRCA 301 Query 304 EPLTEDATADRVRWQLDGWLNNRN------------ARDRPTAAVTLLRLQAVETVSASE 351 EPLTEDATADRVRWQLDGWLN RN RP A +T+LRL+ VE VSA E Sbjct 302 EPLTEDATADRVRWQLDGWLNRRNPDRRAGAKRPGDGYGRPGAPITVLRLRPVEVVSA-E 360 Query 352 GLQLPLWGGLGEQDRLRARRALVRVQGLLGPEAVRVPVLSGGHGPAERITLTVLGLVAPE 411 LQLPLWGG+GEQDRLRARRALVRVQGLLGPEAV+VPVLSGG GPAERITLT G E Sbjct 361 ALQLPLWGGVGEQDRLRARRALVRVQGLLGPEAVKVPVLSGGRGPAERITLTPFG---DE 417 Query 412 PVPQADPGQPWPGRLPDPSPAVLFDDPVDLLDAQGNPIRVTSRGMFSADPARLRVRGRDD 471 VPQA+P QPWPGRLP+PSP VL DDPV+L DA+GNP+RVT RG+FSA+P+RL GR Sbjct 418 LVPQANPDQPWPGRLPEPSPTVLLDDPVELFDAEGNPVRVTGRGLFSAEPSRLHAPGRSG 477 Query 472 RLRWWAGPWPDDERWWDPDRASGRTARAQVLLDGDPGTALLLCYRQRRWYLEGSYE 527 +L WWAGPWP DERWWDP SGRTARAQVL+D ALLLCYRQRRWYLEG YE Sbjct 478 QLSWWAGPWPVDERWWDPSSKSGRTARAQVLIDET--QALLLCYRQRRWYLEGVYE 531 >gi|169630791|ref|YP_001704440.1| hypothetical protein MAB_3712c [Mycobacterium abscessus ATCC 19977] gi|169242758|emb|CAM63786.1| Conserved hypothetical protein [Mycobacterium abscessus] Length=514 Score = 632 bits (1631), Expect = 4e-179, Method: Compositional matrix adjust. Identities = 348/521 (67%), Positives = 400/521 (77%), Gaps = 10/521 (1%) Query 10 IWCMDWPAVAAAAAAGLSATAPVAVTLANRVIACSATARAAGVRRGLRRREAAARCPQLF 69 +WC DWPAVAAAA A L AT PVAVTLANRV AC+A ARA GVRRG+RRRE+ ARCPQL Sbjct 1 MWCPDWPAVAAAAMADLPATRPVAVTLANRVTACTAAARALGVRRGMRRRESQARCPQLH 60 Query 70 IATADADRDARLFEGVIAAVDDLVPRAELLRPGLLVLPVRGPARFFGSEQMAAERLIDAV 129 IA ADADRDAR FE +IAAVDDLVP AE+LRPGLL LPV G AR+FGSE AAERL DAV Sbjct 61 IAVADADRDARFFEPMIAAVDDLVPGAEILRPGLLALPVTGAARYFGSEHAAAERLADAV 120 Query 130 AAAGAECQVGIADRLSTAVFAARAGRIVEPGGDARFLSLLSIRQLATEPSLSGPGRDDLT 189 + AGAECQVGIAD++STAV+AAR +V PGGDA+FL+ LS+++LA EPSL P R+DL Sbjct 121 SVAGAECQVGIADQMSTAVYAARHAALVPPGGDAQFLAPLSVKELAAEPSLCHPQREDLV 180 Query 190 DLLWRMGIRTIGQFAALSRTDVASRFGADAVAAHRFARGEPERAPCGREPPPDLAAELAC 249 DLLWRMGIRTIG FA L+R DVASRF DAV AHR AR E +R P G P +L EL+C Sbjct 181 DLLWRMGIRTIGAFAELARADVASRFDDDAVQAHRHARAESQRPPSGHAVPAELGVELSC 240 Query 250 DPPIDRVDAAAFAGRSLAAELHRALMAAGVGCTRLAIHAVTANGEERSRVWRCAEPLTED 309 DPPIDRVDAAAFAGR+LA LH L +AGV C+RLAIHAVT +G+E SRVWRCAEPLTE+ Sbjct 241 DPPIDRVDAAAFAGRTLAVRLHERLSSAGVACSRLAIHAVTVDGQELSRVWRCAEPLTEE 300 Query 310 ATADRVRWQLDGWLNNRNARDRPTAAVTLLRLQAVETVSASEGLQLPLWGGLGEQDRLRA 369 ATADRVRWQLDGWL R D P V LLRL+ VE V+A E LQL LWG +G ++R RA Sbjct 301 ATADRVRWQLDGWLARRRCLDGP---VALLRLEPVEVVTA-EALQLTLWGAVGAEERQRA 356 Query 370 RRALVRVQGLLGPEAVRVPVLSGGHGPAERITLTVLGLVAPEPVPQADPGQPWPGRLPDP 429 RRAL RVQ LLG E+V+V V+SGG GPAERITL LG E P+ADP PWPG+LPDP Sbjct 357 RRALTRVQDLLGEESVQVGVISGGRGPAERITLVPLG---DELRPRADPSAPWPGKLPDP 413 Query 430 SPAVLFDDPVDLLDAQGNPIRVTSRGMFSADPARLRVRGRDDRLRWWAGPWPDDERWWDP 489 +P VL D+PV+LLD G P+ VT RGMFS +PAR+R L WWAGPWP DERWW+ Sbjct 414 APVVLSDEPVELLDVDGAPVTVTGRGMFSGEPARVRRGNGRWELSWWAGPWPIDERWWEE 473 Query 490 DRASGRT--ARAQVLLDGD-PGTALLLCYRQRRWYLEGSYE 527 + + ARAQVLL+ G ALLL +R++RWY+EG YE Sbjct 474 REPTSVSVAARAQVLLESSGGGQALLLHFRRQRWYVEGVYE 514 >gi|289571629|ref|ZP_06451856.1| conserved hypothetical protein [Mycobacterium tuberculosis T17] gi|289545383|gb|EFD49031.1| conserved hypothetical protein [Mycobacterium tuberculosis T17] Length=317 Score = 622 bits (1603), Expect = 6e-176, Method: Compositional matrix adjust. Identities = 316/317 (99%), Positives = 317/317 (100%), Gaps = 0/317 (0%) Query 211 VASRFGADAVAAHRFARGEPERAPCGREPPPDLAAELACDPPIDRVDAAAFAGRSLAAEL 270 +ASRFGADAVAAHRFARGEPERAPCGREPPPDLAAELACDPPIDRVDAAAFAGRSLAAEL Sbjct 1 MASRFGADAVAAHRFARGEPERAPCGREPPPDLAAELACDPPIDRVDAAAFAGRSLAAEL 60 Query 271 HRALMAAGVGCTRLAIHAVTANGEERSRVWRCAEPLTEDATADRVRWQLDGWLNNRNARD 330 HRALMAAGVGCTRLAIHAVTANGEERSRVWRCAEPLTEDATADRVRWQLDGWLNNRNARD Sbjct 61 HRALMAAGVGCTRLAIHAVTANGEERSRVWRCAEPLTEDATADRVRWQLDGWLNNRNARD 120 Query 331 RPTAAVTLLRLQAVETVSASEGLQLPLWGGLGEQDRLRARRALVRVQGLLGPEAVRVPVL 390 RPTAAVTLLRLQAVETVSASEGLQLPLWGGLGEQDRLRARRALVRVQGLLGPEAVRVPVL Sbjct 121 RPTAAVTLLRLQAVETVSASEGLQLPLWGGLGEQDRLRARRALVRVQGLLGPEAVRVPVL 180 Query 391 SGGHGPAERITLTVLGLVAPEPVPQADPGQPWPGRLPDPSPAVLFDDPVDLLDAQGNPIR 450 SGGHGPAERITLTVLGLVAPEPVPQADPGQPWPGRLPDPSPAVLFDDPVDLLDAQGNPIR Sbjct 181 SGGHGPAERITLTVLGLVAPEPVPQADPGQPWPGRLPDPSPAVLFDDPVDLLDAQGNPIR 240 Query 451 VTSRGMFSADPARLRVRGRDDRLRWWAGPWPDDERWWDPDRASGRTARAQVLLDGDPGTA 510 VTSRGMFSADPARLRVRGRDDRLRWWAGPWPDDERWWDPDRASGRTARAQVLLDGDPGTA Sbjct 241 VTSRGMFSADPARLRVRGRDDRLRWWAGPWPDDERWWDPDRASGRTARAQVLLDGDPGTA 300 Query 511 LLLCYRQRRWYLEGSYE 527 LLLCYRQRRWYLEGSYE Sbjct 301 LLLCYRQRRWYLEGSYE 317 >gi|54022873|ref|YP_117115.1| hypothetical protein nfa9060 [Nocardia farcinica IFM 10152] gi|54014381|dbj|BAD55751.1| hypothetical protein [Nocardia farcinica IFM 10152] Length=525 Score = 575 bits (1482), Expect = 6e-162, Method: Compositional matrix adjust. Identities = 337/525 (65%), Positives = 376/525 (72%), Gaps = 10/525 (1%) Query 4 SARVLAIWCMDWPAVAAAAAAGLSATAPVAVTLANRVIACSATARAAGVRRGLRRREAAA 63 ++RVLA+WC DWPAVAAAA A + T PVAV ANRV ACSATAR AGVRRGLRRREA A Sbjct 8 ASRVLAVWCRDWPAVAAAAVAEVPPTRPVAVLSANRVTACSATARVAGVRRGLRRREAQA 67 Query 64 RCPQLFIATADADRDARLFEGVIAAVDDLVPRAELLRPGLLVLPVRGPARFFGSEQMAAE 123 RCP+L +A +D DRDARLFE V+AAVD VP E+LRPGLLVL RG ARFFGSE+ AAE Sbjct 68 RCPELHLAQSDPDRDARLFEPVVAAVDATVPGVEVLRPGLLVLGARGAARFFGSEEAAAE 127 Query 124 RLIDAVAAAGAECQVGIADRLSTAVFAARAGRIVEPGGDARFLSLLSIRQLATEPSLSGP 183 RL+DAVAA G E QVGIAD + TAV AAR G +V PG A FL+ L + +LA EPSL+ P Sbjct 128 RLVDAVAAVGVEAQVGIADEVFTAVIAARHGAVVAPGAGADFLAPLPVAELAVEPSLAAP 187 Query 184 GRDDLTDLLWRMGIRTIGQFAALSRTDVASRFGADAVAAHRFARGEPERAPCGREPPPDL 243 R DL DLL R+G+R +G FAAL +V SRFGADAV AHR AR PER P R P PDL Sbjct 188 ERADLVDLLHRLGLRRVGDFAALRPAEVGSRFGADAVLAHRSARALPERPPSARRPAPDL 247 Query 244 AAELACDPPIDRVDAAAFAGRSLAAELHRALMAAGVGCTRLAIHAVTANGEERSRVWRCA 303 E CDPPIDRVDAAAFAGR LA ELH AL AA + CTRLA+HA T GE+ SR WRCA Sbjct 248 VVEHRCDPPIDRVDAAAFAGRLLATELHGALAAASLACTRLAVHAETEAGEQLSRTWRCA 307 Query 304 EPLTEDATADRVRWQLDGWLNNRNARDRPTAAVTLLRLQAVETVSASEGLQLPLWGGLGE 363 +PLT TADRVRWQLDGWL DRP+A VTLLRL+ VE V A LQL LWGG+GE Sbjct 308 QPLTPADTADRVRWQLDGWLTR---GDRPSAPVTLLRLEPVEVVRAG-ALQLGLWGGVGE 363 Query 364 QDRLRARRALVRVQGLLGPEAVRVPVLSGGHGPAERITLTVLGLVAPEPVPQADPGQPWP 423 +D RARRALVRVQGLLG EAVRV VLSGG GPAER+TL VLG E VP ADP QPWP Sbjct 364 EDE-RARRALVRVQGLLGGEAVRVGVLSGGRGPAERVTLVVLG---DERVPAADPDQPWP 419 Query 424 GRLPDPSPAVLFD--DPVDLLDAQGNPIRVTSRGMFSADPARLRVRGRDDRLRWWAGPWP 481 GRLP+P+PAVL V LL A G P+ +T RG+F+ADP L R RL WAGPWP Sbjct 420 GRLPEPAPAVLLTPRPQVRLLAADGAPVEITPRGLFTADPVHLHWESRSWRLTGWAGPWP 479 Query 482 DDERWWDPDRASGRTARAQVLLDGDPGTALLLCYRQRRWYLEGSY 526 DE WW P ++ ARAQV + LLL YR W EG Y Sbjct 480 VDEHWWAPGGSAALAARAQVRITDSQDRVLLLGYRDGVWEAEGVY 524 >gi|167968721|ref|ZP_02550998.1| hypothetical protein MtubH3_12050 [Mycobacterium tuberculosis H37Ra] Length=300 Score = 565 bits (1456), Expect = 7e-159, Method: Compositional matrix adjust. Identities = 299/300 (99%), Positives = 299/300 (99%), Gaps = 0/300 (0%) Query 2 MASARVLAIWCMDWPAVAAAAAAGLSATAPVAVTLANRVIACSATARAAGVRRGLRRREA 61 MASARVLAIWCMDWPAVAAAAAAGLSATAPVAVTLANRVIACSATARAAGVRRGLRRREA Sbjct 1 MASARVLAIWCMDWPAVAAAAAAGLSATAPVAVTLANRVIACSATARAAGVRRGLRRREA 60 Query 62 AARCPQLFIATADADRDARLFEGVIAAVDDLVPRAELLRPGLLVLPVRGPARFFGSEQMA 121 AARCPQLFIATADADRDARLFEGVIAAVDDLVPRAELLRPGLLVLPVRGPARFFGSEQMA Sbjct 61 AARCPQLFIATADADRDARLFEGVIAAVDDLVPRAELLRPGLLVLPVRGPARFFGSEQMA 120 Query 122 AERLIDAVAAAGAECQVGIADRLSTAVFAARAGRIVEPGGDARFLSLLSIRQLATEPSLS 181 AERLIDAVAAAGAECQVGIADRLSTAVFAARAGRIVEPGGDARFLSLLSIRQLATEPSLS Sbjct 121 AERLIDAVAAAGAECQVGIADRLSTAVFAARAGRIVEPGGDARFLSLLSIRQLATEPSLS 180 Query 182 GPGRDDLTDLLWRMGIRTIGQFAALSRTDVASRFGADAVAAHRFARGEPERAPCGREPPP 241 GPGRDDLTDLLWRMGIRTIGQFAALSRTDVASRFGADAVAAHRFARGEPERAPCGREPPP Sbjct 181 GPGRDDLTDLLWRMGIRTIGQFAALSRTDVASRFGADAVAAHRFARGEPERAPCGREPPP 240 Query 242 DLAAELACDPPIDRVDAAAFAGRSLAAELHRALMAAGVGCTRLAIHAVTANGEERSRVWR 301 DLAAELACDPPIDRVDAAAFAGRSLAAELHRALMAAGVGCTRLAIHAVT NGEERSRVWR Sbjct 241 DLAAELACDPPIDRVDAAAFAGRSLAAELHRALMAAGVGCTRLAIHAVTDNGEERSRVWR 300 >gi|325675548|ref|ZP_08155232.1| DNA-directed DNA polymerase [Rhodococcus equi ATCC 33707] gi|325553519|gb|EGD23197.1| DNA-directed DNA polymerase [Rhodococcus equi ATCC 33707] Length=518 Score = 551 bits (1420), Expect = 1e-154, Method: Compositional matrix adjust. Identities = 334/526 (64%), Positives = 381/526 (73%), Gaps = 11/526 (2%) Query 4 SARVLAIWCMDWPAVAAAAAAGLSATAPVAVTLANRVIACSATARAAGVRRGLRRREAAA 63 SARVLA+WC DWPAVAAAAAA L AT PVAV LANRVIACSA ARA GV+RGLRRREA A Sbjct 2 SARVLAVWCPDWPAVAAAAAADLPATRPVAVFLANRVIACSAQARAEGVQRGLRRREAQA 61 Query 64 RCPQLFIATADADRDARLFEGVIAAVDDLVPRAELLRPGLLVLPVRGPARFFGSEQMAAE 123 RCP+L +A +D +RDARLFE V AAVD+ P E+LRPGLLVL RG R+FGSE+ AAE Sbjct 62 RCPELHVAQSDPERDARLFESVAAAVDEAAPGVEVLRPGLLVLAARGAVRYFGSEEAAAE 121 Query 124 RLIDAVAAAGAECQVGIADRLSTAVFAARAGRIVEPGGDARFLSLLSIRQLATEPSLSGP 183 R++DAVAAAGAECQ+GIAD LSTAV AAR +V GG ARFL+ L I ++A EPSLS P Sbjct 122 RIVDAVAAAGAECQIGIADELSTAVIAARRAALVPAGGGARFLAPLPIAEIAAEPSLSAP 181 Query 184 GRDDLTDLLWRMGIRTIGQFAALSRTDVASRFGADAVAAHRFARGEPERAPCGREPPPDL 243 R DL DLL R+G+RT+G FAALS DVASRFG DAV AHR ARGEPER P R PPDL Sbjct 182 DRTDLVDLLRRLGLRTVGAFAALSAVDVASRFGTDAVRAHRAARGEPERPPSARTLPPDL 241 Query 244 AAELACDPPIDRVDAAAFAGRSLAAELHRALMAAGVGCTRLAIHAVTANGEERSRVWRCA 303 E CDPPI+RVDAAAFAGR+LA LH L AA V CTRL + A T NGE SR WRCA Sbjct 242 EVEQQCDPPIERVDAAAFAGRALAERLHAKLSAASVACTRLQVSASTGNGEHLSRTWRCA 301 Query 304 EPLTEDATADRVRWQLDGWLNNRNARDRPTAAVTLLRLQAVETVSASEGLQLPLWGGLGE 363 EPLT + TADRVRWQLDGWL R+ RPTA +T+L L+ VE V+A LQL LWGG+GE Sbjct 302 EPLTPEGTADRVRWQLDGWLTGRS-DSRPTAGITVLSLEPVEVVAAG-ALQLGLWGGVGE 359 Query 364 QDRLRARRALVRVQGLLGPEAVRVPVLSGGHGPAERITLTVLGLVAPEPVPQADPGQPWP 423 +D RARRALVRVQGLLG EAV+V VLSGG GP +RITL LG E V + DP PWP Sbjct 360 EDE-RARRALVRVQGLLGGEAVQVGVLSGGRGPMDRITLVPLG---DELVAETDPSAPWP 415 Query 424 GRLPDPSPAVLFDD--PVDLLDAQGNPIRVTSRGMFSADPARLRVRGRDDRLRWWAGPWP 481 GR+P+P+P+ + + V L D G P+ VT RG A P LR RD ++ WAGPW Sbjct 416 GRMPEPAPSTVLPNVPVVSLEDRSGAPVHVTERGELGAAPTLLRWGSRDWGVQGWAGPWS 475 Query 482 DDERWWDPDRASGRTARAQVLLDGDPGTALLLCYRQRRWYLEGSYE 527 DERWWD A+ +R QVLL ALLL Y + RW +EG YE Sbjct 476 VDERWWD-ASAARAASRVQVLLADS--RALLLIYERGRWGVEGIYE 518 >gi|312140815|ref|YP_004008151.1| hypothetical protein REQ_34810 [Rhodococcus equi 103S] gi|311890154|emb|CBH49472.1| putative secreted protein [Rhodococcus equi 103S] Length=518 Score = 550 bits (1416), Expect = 3e-154, Method: Compositional matrix adjust. Identities = 334/526 (64%), Positives = 380/526 (73%), Gaps = 11/526 (2%) Query 4 SARVLAIWCMDWPAVAAAAAAGLSATAPVAVTLANRVIACSATARAAGVRRGLRRREAAA 63 SARVLA+WC DWPAVAAAAAA L AT PVAV LANRVIACSA ARA GVRRGLRRREA A Sbjct 2 SARVLAVWCPDWPAVAAAAAADLPATRPVAVFLANRVIACSAQARAEGVRRGLRRREAQA 61 Query 64 RCPQLFIATADADRDARLFEGVIAAVDDLVPRAELLRPGLLVLPVRGPARFFGSEQMAAE 123 RCP+L +A +D +RDARLFE V AAVD+ P E+LRPGLLVL RG R+FGSE+ AAE Sbjct 62 RCPELHVAQSDPERDARLFESVAAAVDEAAPGVEVLRPGLLVLAARGAVRYFGSEEAAAE 121 Query 124 RLIDAVAAAGAECQVGIADRLSTAVFAARAGRIVEPGGDARFLSLLSIRQLATEPSLSGP 183 R++DAVAAAGAECQ+GIAD LSTAV AAR +V GG ARFL+ L I ++A EPSLS P Sbjct 122 RIMDAVAAAGAECQIGIADELSTAVIAARRAALVPAGGGARFLAPLPIAEIAAEPSLSAP 181 Query 184 GRDDLTDLLWRMGIRTIGQFAALSRTDVASRFGADAVAAHRFARGEPERAPCGREPPPDL 243 R DL DLL R+G+RT+G FAALS DVASRFG DAV AHR ARGEPER P R PPDL Sbjct 182 DRTDLVDLLRRLGLRTVGAFAALSAVDVASRFGTDAVRAHRAARGEPERPPSARALPPDL 241 Query 244 AAELACDPPIDRVDAAAFAGRSLAAELHRALMAAGVGCTRLAIHAVTANGEERSRVWRCA 303 E CDPPI+RVDAAAFAGR+LA LH L AA V CTRL + A T NGE SR WRCA Sbjct 242 EVEQQCDPPIERVDAAAFAGRALAERLHAKLSAASVACTRLQVSASTGNGEHLSRTWRCA 301 Query 304 EPLTEDATADRVRWQLDGWLNNRNARDRPTAAVTLLRLQAVETVSASEGLQLPLWGGLGE 363 EPLT + TADRVRWQLDGWL R+ RPTA +T+L L+ VE V+A LQL LWGG+GE Sbjct 302 EPLTPEGTADRVRWQLDGWLTGRS-DSRPTAGITVLSLEPVEVVAAG-ALQLGLWGGVGE 359 Query 364 QDRLRARRALVRVQGLLGPEAVRVPVLSGGHGPAERITLTVLGLVAPEPVPQADPGQPWP 423 ++ RARRALVRVQGLLG EAV+V VLSGG GP +RITL LG E V + DP PWP Sbjct 360 ENE-RARRALVRVQGLLGGEAVQVGVLSGGRGPMDRITLVPLG---DELVSETDPSAPWP 415 Query 424 GRLPDPSPAVLFDD--PVDLLDAQGNPIRVTSRGMFSADPARLRVRGRDDRLRWWAGPWP 481 GR+P+P+P+ + + V L D G P+ VT RG A P LR RD ++ WAGPW Sbjct 416 GRIPEPAPSTVLPNVPVVSLEDRSGAPVHVTERGELGAAPTLLRWGSRDWGVQGWAGPWS 475 Query 482 DDERWWDPDRASGRTARAQVLLDGDPGTALLLCYRQRRWYLEGSYE 527 DERWWD A+ +R QVLL ALLL Y RW +EG YE Sbjct 476 VDERWWD-ASAARAASRVQVLLADS--RALLLIYEGGRWGVEGIYE 518 >gi|226365682|ref|YP_002783465.1| hypothetical protein ROP_62730 [Rhodococcus opacus B4] gi|226244172|dbj|BAH54520.1| hypothetical protein [Rhodococcus opacus B4] Length=517 Score = 545 bits (1405), Expect = 6e-153, Method: Compositional matrix adjust. Identities = 335/525 (64%), Positives = 389/525 (75%), Gaps = 11/525 (2%) Query 5 ARVLAIWCMDWPAVAAAAAAGLSATAPVAVTLANRVIACSATARAAGVRRGLRRREAAAR 64 +RVLA+WC DWPAVAAAAA L T PVAVT NRVIACSA ARA GVRRGLRRRE+ AR Sbjct 2 SRVLALWCPDWPAVAAAAATDLPPTHPVAVTSGNRVIACSAPARADGVRRGLRRRESQAR 61 Query 65 CPQLFIATADADRDARLFEGVIAAVDDLVPRAELLRPGLLVLPVRGPARFFGSEQMAAER 124 CP+L++ AD DRDARLFE V +AVD + P E+LRPGL+VL RG AR+FGSE+ AAER Sbjct 62 CPRLYVVAADPDRDARLFEPVASAVDAVAPGVEVLRPGLVVLSARGVARYFGSEEAAAER 121 Query 125 LIDAVAAAGAECQVGIADRLSTAVFAARAGRIVEPGGDARFLSLLSIRQLATEPSLSGPG 184 L+D V+A G ECQVGIAD+LSTAV AAR +V PG A FL+ L +R+LA EPSL+ P Sbjct 122 LVDQVSAVGVECQVGIADQLSTAVIAARRATLVPPGEGAAFLAPLPMRELAAEPSLAAPH 181 Query 185 RDDLTDLLWRMGIRTIGQFAALSRTDVASRFGADAVAAHRFARGEPERAPCGREPPPDLA 244 R +L DLL R+G+RTIG FAALS DVASRFG DAV AHR ARG PER P GR PPDL Sbjct 182 RGELVDLLHRLGLRTIGSFAALSAGDVASRFGTDAVLAHRAARGAPERPPSGRSLPPDLE 241 Query 245 AELACDPPIDRVDAAAFAGRSLAAELHRALMAAGVGCTRLAIHAVTANGEERSRVWRCAE 304 E CDP I+RVDAAAFAGR+LA +LHR L A V CTRL+I A T NGE+ SR+WRCAE Sbjct 242 VEERCDPVIERVDAAAFAGRALAEKLHRTLSDAAVACTRLSISASTGNGEQLSRIWRCAE 301 Query 305 PLTEDATADRVRWQLDGWLNNRNARDRPTAAVTLLRLQAVETVSASEGLQLPLWGGLGEQ 364 PLT +ATADRVRWQLDGWL R+ + RPTA + +LRL+ VE V+A LQL LWGG+G+Q Sbjct 302 PLTPEATADRVRWQLDGWLTGRSEK-RPTAGIAVLRLEPVEVVAAG-ALQLGLWGGVGDQ 359 Query 365 DRLRARRALVRVQGLLGPEAVRVPVLSGGHGPAERITLTVLGLVAPEPVPQADPGQPWPG 424 D RARRALVRVQGLLG EAV+V VLSGG GPAERITL LG E +P+ DP +PWPG Sbjct 360 DE-RARRALVRVQGLLGGEAVQVGVLSGGRGPAERITLLPLG---DELIPRNDPSEPWPG 415 Query 425 RLPDPSP-AVLFDDP-VDLLDAQGNPIRVTSRGMFSADPARLRVRGRDDRLRWWAGPWPD 482 LP+P+P AVL P V + D +G + VT RG+FSA PARLR R+ + WAGPWP Sbjct 416 TLPEPAPAAVLTAYPEVWMSDERGIAVTVTERGVFSAPPARLRWGSREWAVCGWAGPWPV 475 Query 483 DERWWDPDRASGRTARAQVLLDGDPGTALLLCYRQRRWYLEGSYE 527 DERWWD A+ ARAQVLL+ ALL+ RW +EG YE Sbjct 476 DERWWD-PPAARTAARAQVLLEES--RALLVICTAGRWSVEGIYE 517 >gi|111023176|ref|YP_706148.1| DNA-directed DNA polymerase [Rhodococcus jostii RHA1] gi|110822706|gb|ABG97990.1| possible DNA-directed DNA polymerase [Rhodococcus jostii RHA1] Length=517 Score = 534 bits (1375), Expect = 2e-149, Method: Compositional matrix adjust. Identities = 335/525 (64%), Positives = 389/525 (75%), Gaps = 11/525 (2%) Query 5 ARVLAIWCMDWPAVAAAAAAGLSATAPVAVTLANRVIACSATARAAGVRRGLRRREAAAR 64 +RVLA+WC DWPAVAAAAAA L T PVAVT NRVIACSA ARA GVRRGLRRREA AR Sbjct 2 SRVLALWCPDWPAVAAAAAADLPPTHPVAVTSGNRVIACSAPARADGVRRGLRRREAQAR 61 Query 65 CPQLFIATADADRDARLFEGVIAAVDDLVPRAELLRPGLLVLPVRGPARFFGSEQMAAER 124 CP+L + TAD DRDARLFE V +AVD + P E+LRPGL+VL RG AR+FGSE+ AAER Sbjct 62 CPRLHVVTADPDRDARLFEAVASAVDAVAPGVEVLRPGLVVLSARGVARYFGSEEAAAER 121 Query 125 LIDAVAAAGAECQVGIADRLSTAVFAARAGRIVEPGGDARFLSLLSIRQLATEPSLSGPG 184 L+D V+A G ECQVGIAD+LSTAV AAR +V PG FL+ L +R+LA EPSL+ P Sbjct 122 LVDQVSAVGVECQVGIADQLSTAVIAARRATLVPPGEGTAFLAPLPMRELAAEPSLAAPH 181 Query 185 RDDLTDLLWRMGIRTIGQFAALSRTDVASRFGADAVAAHRFARGEPERAPCGREPPPDLA 244 R +L DLL R+G+RTIG FAALS DVASRFG DAV AHR AR EPER P GR PPDL Sbjct 182 RGELVDLLHRLGLRTIGSFAALSAGDVASRFGTDAVLAHRAARSEPERPPSGRSLPPDLE 241 Query 245 AELACDPPIDRVDAAAFAGRSLAAELHRALMAAGVGCTRLAIHAVTANGEERSRVWRCAE 304 E CDP I+RVDAAAFAGR+LA +LHR L A V CTRL+I A T NGE+ SR+WRCAE Sbjct 242 VEERCDPVIERVDAAAFAGRALAEKLHRTLSDAAVACTRLSISASTGNGEQLSRIWRCAE 301 Query 305 PLTEDATADRVRWQLDGWLNNRNARDRPTAAVTLLRLQAVETVSASEGLQLPLWGGLGEQ 364 PLT +ATADRVRWQLDGWL R+ + RP+A + +LRL+ VE V+A LQL LWGG+G++ Sbjct 302 PLTPEATADRVRWQLDGWLTGRSEK-RPSAGIAVLRLEPVEVVAAG-ALQLGLWGGVGDR 359 Query 365 DRLRARRALVRVQGLLGPEAVRVPVLSGGHGPAERITLTVLGLVAPEPVPQADPGQPWPG 424 D RARRALVRVQGLLG EAV+V VLSGG GPAERITL LG E +P+ DP +PWPG Sbjct 360 DE-RARRALVRVQGLLGGEAVQVGVLSGGRGPAERITLLPLG---DELIPRNDPSEPWPG 415 Query 425 RLPDPSP-AVLFDDP-VDLLDAQGNPIRVTSRGMFSADPARLRVRGRDDRLRWWAGPWPD 482 LP+P+P AVL P V + D +G + VT RG+FSA PARLR R+ + WAGPWP Sbjct 416 TLPEPAPAAVLTAYPEVWMSDERGMAVTVTERGVFSAPPARLRWGSREWAVCGWAGPWPV 475 Query 483 DERWWDPDRASGRTARAQVLLDGDPGTALLLCYRQRRWYLEGSYE 527 DERWWD A+ ARAQVLL+ ALL+ RW +EG YE Sbjct 476 DERWWD-PPAARTAARAQVLLEES--RALLVICTAGRWSVEGIYE 517 >gi|229489611|ref|ZP_04383474.1| umuc domain protein DNA-repair protein [Rhodococcus erythropolis SK121] gi|229323708|gb|EEN89466.1| umuc domain protein DNA-repair protein [Rhodococcus erythropolis SK121] Length=517 Score = 531 bits (1369), Expect = 8e-149, Method: Compositional matrix adjust. Identities = 328/525 (63%), Positives = 382/525 (73%), Gaps = 11/525 (2%) Query 5 ARVLAIWCMDWPAVAAAAAAGLSATAPVAVTLANRVIACSATARAAGVRRGLRRREAAAR 64 +RVLA+WC DWPAVAAAA A L AT PVAVT NRVIACSATARA GVRRGLRRRE+ AR Sbjct 2 SRVLALWCPDWPAVAAAALADLPATHPVAVTSGNRVIACSATARAEGVRRGLRRRESQAR 61 Query 65 CPQLFIATADADRDARLFEGVIAAVDDLVPRAELLRPGLLVLPVRGPARFFGSEQMAAER 124 CP+L++A AD +RDARLFE V AA+D + P E+LRPGLLVL RG +R+FGSE+ AAER Sbjct 62 CPELYVAMADPERDARLFEPVAAAIDAVAPGVEVLRPGLLVLSARGVSRYFGSEEAAAER 121 Query 125 LIDAVAAAGAECQVGIADRLSTAVFAARAGRIVEPGGDARFLSLLSIRQLATEPSLSGPG 184 L+D +AAG E QVG+AD+LSTAV AAR +V PG ARFL+ L + +LA EPSLS P Sbjct 122 LVDQASAAGVESQVGVADQLSTAVIAARRAALVPPGEGARFLAPLPMPELAAEPSLSAPH 181 Query 185 RDDLTDLLWRMGIRTIGQFAALSRTDVASRFGADAVAAHRFARGEPERAPCGREPPPDLA 244 R +L DLL R+GIRTIG FA L DVASRFGADAV AHR ARGEPER P R PPDL Sbjct 182 RGELVDLLRRLGIRTIGAFADLPAVDVASRFGADAVLAHRAARGEPERPPSARTLPPDLE 241 Query 245 AELACDPPIDRVDAAAFAGRSLAAELHRALMAAGVGCTRLAIHAVTANGEERSRVWRCAE 304 E DP I+RVDAAAFAGR+LA+ LH L AA V CTRL+I A T NGE SR WRCAE Sbjct 242 VEQHYDPSIERVDAAAFAGRALASLLHDKLSAAAVACTRLSISASTGNGENLSRTWRCAE 301 Query 305 PLTEDATADRVRWQLDGWLNNRNARDRPTAAVTLLRLQAVETVSASEGLQLPLWGGLGEQ 364 PLT + TADRVRWQLDGWL R+ RPTA + +LRL+ VE VSA LQL LWGG+G++ Sbjct 302 PLTPEGTADRVRWQLDGWLTGRS-ETRPTAGIAVLRLEPVEVVSAG-ALQLGLWGGVGDE 359 Query 365 DRLRARRALVRVQGLLGPEAVRVPVLSGGHGPAERITLTVLGLVAPEPVPQADPGQPWPG 424 + RARRALVRVQGLLG E+V+V VLSGG GP+ERITL LG E V DP PWPG Sbjct 360 EE-RARRALVRVQGLLGGESVQVGVLSGGRGPSERITLLPLG---DERVAAHDPTAPWPG 415 Query 425 RLPDPSPAVLF-DDP-VDLLDAQGNPIRVTSRGMFSADPARLRVRGRDDRLRWWAGPWPD 482 RLP PSP +F D+P V L D GN + VT RG+FS+ P RL+ ++ ++ WAGPWP Sbjct 416 RLPQPSPGSIFVDNPKVWLEDVAGNAVYVTERGVFSSQPGRLKWGSKEWAVQGWAGPWPV 475 Query 483 DERWWDPDRASGRTARAQVLLDGDPGTALLLCYRQRRWYLEGSYE 527 DERWWD ++ ARAQVLL + ALL+ W +EG YE Sbjct 476 DERWWD-AASARTAARAQVLL--EESRALLMICEGGGWSVEGVYE 517 >gi|226184557|dbj|BAH32661.1| conserved hypothetical protein [Rhodococcus erythropolis PR4] Length=855 Score = 528 bits (1359), Expect = 1e-147, Method: Compositional matrix adjust. Identities = 329/525 (63%), Positives = 380/525 (73%), Gaps = 11/525 (2%) Query 5 ARVLAIWCMDWPAVAAAAAAGLSATAPVAVTLANRVIACSATARAAGVRRGLRRREAAAR 64 +RVLA+WC DWPAVAAAA A L AT PVAVT NRVIACSATARA GVRRGLRRRE+ AR Sbjct 340 SRVLALWCPDWPAVAAAALADLPATHPVAVTSGNRVIACSATARAEGVRRGLRRRESQAR 399 Query 65 CPQLFIATADADRDARLFEGVIAAVDDLVPRAELLRPGLLVLPVRGPARFFGSEQMAAER 124 CP+L++A AD +RDARLFE V AA+D + P E+LRPGLLVL RG +R+FGSE+ AAER Sbjct 400 CPELYVAMADPERDARLFEPVAAAIDAVAPGVEVLRPGLLVLSARGVSRYFGSEEAAAER 459 Query 125 LIDAVAAAGAECQVGIADRLSTAVFAARAGRIVEPGGDARFLSLLSIRQLATEPSLSGPG 184 L+D +AAG E QVG+AD+LSTAV AAR +V PG ARFL+ L + +LA EPSLS P Sbjct 460 LVDQASAAGVESQVGVADQLSTAVIAARRAALVPPGEGARFLAPLPMPELAAEPSLSAPH 519 Query 185 RDDLTDLLWRMGIRTIGQFAALSRTDVASRFGADAVAAHRFARGEPERAPCGREPPPDLA 244 R +L DLL R+GIRTIG FA L DVASRFGADAV AHR ARGEPER P R PPDL Sbjct 520 RGELVDLLRRLGIRTIGAFADLPAVDVASRFGADAVLAHRAARGEPERPPSARTLPPDLE 579 Query 245 AELACDPPIDRVDAAAFAGRSLAAELHRALMAAGVGCTRLAIHAVTANGEERSRVWRCAE 304 E DP I+RVDAAAFAGR+LA+ LH L AA V CTRL+I A T NGE SR WRCAE Sbjct 580 VEQHYDPSIERVDAAAFAGRALASLLHDKLSAAAVACTRLSISASTGNGENLSRTWRCAE 639 Query 305 PLTEDATADRVRWQLDGWLNNRNARDRPTAAVTLLRLQAVETVSASEGLQLPLWGGLGEQ 364 PLT + TADRVRWQLDGWL R+ RPTA + +LRL+ VE VSA LQL LWGG+G++ Sbjct 640 PLTPEGTADRVRWQLDGWLTGRS-ETRPTAGIAVLRLEPVEVVSAGA-LQLGLWGGVGDE 697 Query 365 DRLRARRALVRVQGLLGPEAVRVPVLSGGHGPAERITLTVLGLVAPEPVPQADPGQPWPG 424 + RARRALVRVQGLLG E+V+V VLSGG GP ERITL LG E V DP PWPG Sbjct 698 EE-RARRALVRVQGLLGGESVQVGVLSGGRGPLERITLLPLG---DERVATHDPTAPWPG 753 Query 425 RLPDPSPAVLF-DDP-VDLLDAQGNPIRVTSRGMFSADPARLRVRGRDDRLRWWAGPWPD 482 RLP PSP +F D+P V L D GN + VT RG+FS+ P RL+ ++ ++ WAGPWP Sbjct 754 RLPQPSPGSIFVDNPKVWLGDVAGNAVYVTERGVFSSQPGRLKWGSKEWAVQGWAGPWPV 813 Query 483 DERWWDPDRASGRTARAQVLLDGDPGTALLLCYRQRRWYLEGSYE 527 DERWWD A ARAQVLL + ALL+ W +EG YE Sbjct 814 DERWWDAASAR-TAARAQVLL--EESRALLMICEGGGWSVEGVYE 855 >gi|289755523|ref|ZP_06514901.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Mycobacterium tuberculosis EAS054] gi|289696110|gb|EFD63539.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Mycobacterium tuberculosis EAS054] Length=339 Score = 523 bits (1346), Expect = 4e-146, Method: Compositional matrix adjust. Identities = 267/268 (99%), Positives = 267/268 (99%), Gaps = 0/268 (0%) Query 260 AFAGRSLAAELHRALMAAGVGCTRLAIHAVTANGEERSRVWRCAEPLTEDATADRVRWQL 319 AFAGRSLAAELHRALMAAGVGCTRLAIHAVTANGEERSRVWRCAEPLTEDATADRVRWQL Sbjct 72 AFAGRSLAAELHRALMAAGVGCTRLAIHAVTANGEERSRVWRCAEPLTEDATADRVRWQL 131 Query 320 DGWLNNRNARDRPTAAVTLLRLQAVETVSASEGLQLPLWGGLGEQDRLRARRALVRVQGL 379 DGWLNNRNARDRPTAAVTLLRLQAVETVSASEGLQLPLWGGLGEQDRLRARRALVRVQGL Sbjct 132 DGWLNNRNARDRPTAAVTLLRLQAVETVSASEGLQLPLWGGLGEQDRLRARRALVRVQGL 191 Query 380 LGPEAVRVPVLSGGHGPAERITLTVLGLVAPEPVPQADPGQPWPGRLPDPSPAVLFDDPV 439 LGPEAVRVPVLSGGHGPAERITLTVLGLVAPEPVPQADPGQPWPGRLPD SPAVLFDDPV Sbjct 192 LGPEAVRVPVLSGGHGPAERITLTVLGLVAPEPVPQADPGQPWPGRLPDLSPAVLFDDPV 251 Query 440 DLLDAQGNPIRVTSRGMFSADPARLRVRGRDDRLRWWAGPWPDDERWWDPDRASGRTARA 499 DLLDAQGNPIRVTSRGMFSADPARLRVRGRDDRLRWWAGPWPDDERWWDPDRASGRTARA Sbjct 252 DLLDAQGNPIRVTSRGMFSADPARLRVRGRDDRLRWWAGPWPDDERWWDPDRASGRTARA 311 Query 500 QVLLDGDPGTALLLCYRQRRWYLEGSYE 527 QVLLDGDPGTALLLCYRQRRWYLEGSYE Sbjct 312 QVLLDGDPGTALLLCYRQRRWYLEGSYE 339 >gi|289752110|ref|ZP_06511488.1| conserved hypothetical protein [Mycobacterium tuberculosis T92] gi|289692697|gb|EFD60126.1| conserved hypothetical protein [Mycobacterium tuberculosis T92] Length=278 Score = 515 bits (1326), Expect = 9e-144, Method: Compositional matrix adjust. Identities = 268/275 (98%), Positives = 270/275 (99%), Gaps = 0/275 (0%) Query 85 VIAAVDDLVPRAELLRPGLLVLPVRGPARFFGSEQMAAERLIDAVAAAGAECQVGIADRL 144 +IAAVDDLVPRAELLRPGLLVLPVRGPARFFGSEQMAAERLIDAVAAAGAECQVGIADRL Sbjct 1 MIAAVDDLVPRAELLRPGLLVLPVRGPARFFGSEQMAAERLIDAVAAAGAECQVGIADRL 60 Query 145 STAVFAARAGRIVEPGGDARFLSLLSIRQLATEPSLSGPGRDDLTDLLWRMGIRTIGQFA 204 STAVFAARAGRIVEPGGDARFLSLLSIRQLATEPSLSGPGRDDLTDLLWRMGIRTIGQFA Sbjct 61 STAVFAARAGRIVEPGGDARFLSLLSIRQLATEPSLSGPGRDDLTDLLWRMGIRTIGQFA 120 Query 205 ALSRTDVASRFGADAVAAHRFARGEPERAPCGREPPPDLAAELACDPPIDRVDAAAFAGR 264 ALSRTDVASRFGADAVAAHRFARGEPERAPCGREPPPDLAAELACDPPIDRVDAAAFAGR Sbjct 121 ALSRTDVASRFGADAVAAHRFARGEPERAPCGREPPPDLAAELACDPPIDRVDAAAFAGR 180 Query 265 SLAAELHRALMAAGVGCTRLAIHAVTANGEERSRVWRCAEPLTEDATADRVRWQLDGWLN 324 SLAAELHRALMAAGVGCTRLAIHAVTANGEERSRVWRCAEPLTEDATADRVRWQLDGWLN Sbjct 181 SLAAELHRALMAAGVGCTRLAIHAVTANGEERSRVWRCAEPLTEDATADRVRWQLDGWLN 240 Query 325 NRNARDRPTAAVTLLRLQAVETVSASEGLQLPLWG 359 NRNARDRPTAAVTLLRLQAVETVSASE L + G Sbjct 241 NRNARDRPTAAVTLLRLQAVETVSASERLAVAAMG 275 >gi|296138653|ref|YP_003645896.1| hypothetical protein Tpau_0923 [Tsukamurella paurometabola DSM 20162] gi|296026787|gb|ADG77557.1| conserved hypothetical protein [Tsukamurella paurometabola DSM 20162] Length=527 Score = 515 bits (1326), Expect = 9e-144, Method: Compositional matrix adjust. Identities = 306/528 (58%), Positives = 358/528 (68%), Gaps = 13/528 (2%) Query 6 RVLAIWCMDWPAVAAAAAAGLSATAPVAVTLANRVIACSATARAAGVRRGLRRREAAARC 65 R+LA+WC DWPA AAAA L PVAV NRVIAC+A ARA GVRRG++RRE+ ARC Sbjct 7 RILALWCPDWPAAAAAADVDLPPDHPVAVLHGNRVIACNAAARADGVRRGMKRRESQARC 66 Query 66 PQLFIATADADRDARLFEGVIAAVDDLVPRAELLRPGLLVLPVRGPARFFGSEQMAAERL 125 P L + AD RDARLFE V AV L+P E+LRPGL+V+P RG ARFFG E+ AAE+L Sbjct 67 PNLHVTAADPGRDARLFEPVAGAVAALIPLIEVLRPGLIVIPARGAARFFGGEEQAAEKL 126 Query 126 IDAVAAAGAECQVGIADRLSTAVFAARAGRIVEPGGDARFLSLLSIRQLATEPSLSGPGR 185 +DA ++ GAE GIAD + TA AAR G IV PGG A FLS L I QL EP+L+ R Sbjct 127 VDAASSVGAESLAGIADEVFTAALAARTGVIVAPGGSAEFLSPLPIAQLGAEPALATDDR 186 Query 186 DDLTDLLWRMGIRTIGQFAALSRTDVASRFGADAVAAHRFARGEPERAPCGREPPPDLAA 245 +L DLL R+G+RT+G FAALS ++VA+RFG DA+AAHR AR +R P PP L A Sbjct 187 AELIDLLRRLGVRTLGAFAALSTSNVATRFGVDAIAAHRQARAVADRPPSTAALPPGLEA 246 Query 246 ELACDPPIDRVDAAAFAGRSLAAELHRALMAAGVGCTRLAIHAVTANGEERSRVWRCAEP 305 EL DPPI+RVDAAAFAGR+LAAELHR L AAGV C RL + AV NGE +R+WRCA+P Sbjct 247 ELRPDPPINRVDAAAFAGRTLAAELHRKLSAAGVACLRLEVSAVAENGERHTRIWRCAQP 306 Query 306 LTEDATADRVRWQLDGWLNNRNARDRPTAA-VTLLRLQAVETVSASEGLQLPLWGGLGEQ 364 LT D TADRVRWQ+DGWL R A +TLLRL+ VE V A LQ +WG G+ Sbjct 307 LTPDGTADRVRWQIDGWLTGGRGRSGGPGAPITLLRLEPVEVVDAG-ALQAGMWGDEGD- 364 Query 365 DRLRARRALVRVQGLLGPEAVRVPVLSGGHGPAERITLTVLGLVAPEPVPQADPGQPWPG 424 R RRALVRVQGLLG EAVR+ SGG GPAE++T T LG E VP DP PWPG Sbjct 365 GAARFRRALVRVQGLLGGEAVRLGTRSGGRGPAEQVTWTPLG---DEAVPAQDPAAPWPG 421 Query 425 RLPDPSPAVLFDD-PVDLLDAQGNPIRVTSRGMFSADPARLRVRGRDDRLRWWAGPWPDD 483 R+P+P+PAVL V + DA G P+RVT RG F+A+P RL RD L WWAGPW D Sbjct 422 RMPEPAPAVLLSGASVAVTDASGTPVRVTERGGFTAEPTRLSWGSRDWALSWWAGPWLVD 481 Query 484 ERWWDPDRASGRTARAQVLLDGDP----GTALLLCYRQRRWYLEGSYE 527 ERWW+ R ARAQVLL+ P G ALLL Y W +EG YE Sbjct 482 ERWWESGAGELR-ARAQVLLEPAPGRDDGRALLLQY-AGGWEVEGVYE 527 >gi|262201692|ref|YP_003272900.1| hypothetical protein Gbro_1747 [Gordonia bronchialis DSM 43247] gi|262085039|gb|ACY21007.1| hypothetical protein Gbro_1747 [Gordonia bronchialis DSM 43247] Length=536 Score = 504 bits (1298), Expect = 1e-140, Method: Compositional matrix adjust. Identities = 298/537 (56%), Positives = 358/537 (67%), Gaps = 29/537 (5%) Query 6 RVLAIWCMDWPAVAAAAAAGLSATAPVAVTLANRVIACSATARAAGVRRGLRRREAAARC 65 RVLA+WC DWPA AAAA LS P+AV ANRVIACSA+AR GVRRG+R+R+A + C Sbjct 14 RVLALWCPDWPATAAAADVDLSPELPIAVLSANRVIACSASARVLGVRRGMRKRQAQSTC 73 Query 66 PQLFIATADADRDARLFEGVIAAVDDLVPRAELLRPGLLVLPVRGPARFFGSEQMAAERL 125 P++ + AD RDAR FE V A V ++ P E+LRPGL+V+P R+FGSE+ +E + Sbjct 74 PEMTLVAADEHRDARFFEPVAAVVAEVAPTLEVLRPGLVVVPGDRAVRYFGSEEALSEEM 133 Query 126 IDAVAAAGAECQVGIADRLSTAVFAARAGRIVEPGGDARFLSLLSIRQLATEPSLSGPGR 185 +DAV+ G E QVGIAD L TAV AAR G VEPGGD R+L+ L I LA EPSLS P R Sbjct 134 VDAVSTCGVESQVGIADELFTAVLAARRGHHVEPGGDRRYLADLPIAHLALEPSLSDPTR 193 Query 186 DDLTDLLWRMGIRTIGQFAALSRTDVASRFGADAVAAHRFARGEPERAPCGREPPPDLAA 245 +L DLL R+GI TIG FAALS DVA+RF ADA AHR A +P R P GR P D+A Sbjct 194 TELVDLLRRLGITTIGAFAALSAADVATRFSADAALAHRLANAQPGRVPSGRRHPVDMAV 253 Query 246 ELACDPPIDRVDAAAFAGRSLAAELHRALMAAGVGCTRLAIHAVTANGEERSRVWRCAEP 305 + CDPP+DRVDAAAF GR LA LHR L+ A CTRL I A T G+ SR WRCA+P Sbjct 254 DHVCDPPVDRVDAAAFLGRQLADALHRRLLDASTACTRLTIEATTERGQRHSRTWRCAQP 313 Query 306 LTEDATADRVRWQLDGWLN-NRNARDRPTAAVTLLRLQAVETVSASEGLQLPLWG-GL-G 362 LT +ATADRVRWQL+GWL R A +P + + LRL+ VE V A LQ L G GL G Sbjct 314 LTPEATADRVRWQLEGWLTGGRGAGVKPDSPIASLRLEPVELVDAG-ALQYGLTGAGLPG 372 Query 363 EQDR-LRARRALVRVQGLLGPEAVRVPVLSGGHGPAERITLTVLGLVAPEPVPQADPGQP 421 +QD RA R+LVR+QG+LG +AV++PVLSGG GPAE+IT+ LG E VPQ DP P Sbjct 373 DQDTDDRAHRSLVRIQGILGGDAVKIPVLSGGRGPAEQITMVALG---DERVPQHDPSAP 429 Query 422 WPGRLPDPSPAVLFDDPVDLLDAQGNPIRVTSRGMFSADPARLRVR--GRDDRLR----- 474 WPGRLP P+PAVL D + +LD G P+ V++RG F+ +P+ +R+ GR R Sbjct 430 WPGRLPQPAPAVLVDTEIIVLDGAGQPVSVSARGAFTTEPSTIRMATVGRHPAGRAMAWE 489 Query 475 --WWAGPWP--DDERWWDPDRASGRTARAQVLLDGDPGTALLLCYRQRRWYLEGSYE 527 WWAGPWP DER G ARAQVLLD ALLLCYR W +EG YE Sbjct 490 VCWWAGPWPTGTDER--------GIIARAQVLLDDS--RALLLCYRGGGWIVEGVYE 536 >gi|289747223|ref|ZP_06506601.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987] gi|289687751|gb|EFD55239.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987] Length=283 Score = 496 bits (1278), Expect = 3e-138, Method: Compositional matrix adjust. Identities = 275/282 (98%), Positives = 279/282 (99%), Gaps = 0/282 (0%) Query 1 VMASARVLAIWCMDWPAVAAAAAAGLSATAPVAVTLANRVIACSATARAAGVRRGLRRRE 60 +MASARVLAIWCMDWPAVAAAAAAGLSATAPVAVTLANRVIACSATARAAGVRRGLRRRE Sbjct 1 MMASARVLAIWCMDWPAVAAAAAAGLSATAPVAVTLANRVIACSATARAAGVRRGLRRRE 60 Query 61 AAARCPQLFIATADADRDARLFEGVIAAVDDLVPRAELLRPGLLVLPVRGPARFFGSEQM 120 AAARCPQLFIATADADRDARLFEGVIAAVDDLVPRAELLRPGLLVLPVRGPARFFGSEQM Sbjct 61 AAARCPQLFIATADADRDARLFEGVIAAVDDLVPRAELLRPGLLVLPVRGPARFFGSEQM 120 Query 121 AAERLIDAVAAAGAECQVGIADRLSTAVFAARAGRIVEPGGDARFLSLLSIRQLATEPSL 180 AAERLIDAVAAAGAECQVGIADRLSTAVFAARAGRIVEPGGDARFLSLLSIRQLATEPSL Sbjct 121 AAERLIDAVAAAGAECQVGIADRLSTAVFAARAGRIVEPGGDARFLSLLSIRQLATEPSL 180 Query 181 SGPGRDDLTDLLWRMGIRTIGQFAALSRTDVASRFGADAVAAHRFARGEPERAPCGREPP 240 SGPGRDDLTDLLWRMGIRTIGQFAALSRTDVASRFGADAVAAHRFARGEPERAPCGREPP Sbjct 181 SGPGRDDLTDLLWRMGIRTIGQFAALSRTDVASRFGADAVAAHRFARGEPERAPCGREPP 240 Query 241 PDLAAELACDPPIDRVDAAAFAGRSLAAELHRALMAAGVGCT 282 PDLAAELACDPPIDRVDAAAFAGRSL A+L+RALMAA +GC Sbjct 241 PDLAAELACDPPIDRVDAAAFAGRSLVAQLYRALMAAAIGCK 282 >gi|333921669|ref|YP_004495250.1| hypothetical protein AS9A_4016 [Amycolicicoccus subflavus DQS3-9A1] gi|333483890|gb|AEF42450.1| hypothetical protein AS9A_4016 [Amycolicicoccus subflavus DQS3-9A1] Length=520 Score = 488 bits (1257), Expect = 9e-136, Method: Compositional matrix adjust. Identities = 302/525 (58%), Positives = 370/525 (71%), Gaps = 11/525 (2%) Query 4 SARVLAIWCMDWPAVAAAAAAGLSATAPVAVTLANRVIACSATARAAGVRRGLRRREAAA 63 +RVLA+WC DWPAVAA+A AG++A PVAV L+NRV+ACSATAR GVRRG+RRREA A Sbjct 4 ESRVLALWCPDWPAVAASAEAGVAAHQPVAVLLSNRVMACSATARMQGVRRGVRRREAQA 63 Query 64 RCPQLFIATADADRDARLFEGVIAAVDDLVPRAELLRPGLLVLPVRGPARFFGSEQMAAE 123 RCP+L++ AD DRDAR FE V AAVD +VP AE++RPGLLVLP RG AR+ G E+ AAE Sbjct 64 RCPELYVCVADEDRDARRFESVAAAVDAIVPGAEIVRPGLLVLPARGVARYLGGEEAAAE 123 Query 124 RLIDAVAAAGAECQVGIADRLSTAVFAARAGRIVEPGGDARFLSLLSIRQLATEPSLSGP 183 RLIDA+A G ECQ GIAD++ TAV AAR G++V G DA +L+ + +LA EP L+ Sbjct 124 RLIDAIAGTGVECQAGIADQIFTAVLAARHGQVVPGGRDAEYLAPFPVSELAVEPGLAAV 183 Query 184 GRDDLTDLLWRMGIRTIGQFAALSRTDVASRFGADAVAAHRFARGEPERAPCGREPPPDL 243 R +LT LL R+G+RTIG FAA+ VASRFG DA++AHR ARGEP+R P GR PPDL Sbjct 184 ERAELTGLLTRLGLRTIGDFAAVEARYVASRFGTDAISAHRRARGEPDRPPSGRALPPDL 243 Query 244 AAELACDPPIDRVDAAAFAGRSLAAELHRALMAAGVGCTRLAIHAVTANGEERSRVWRCA 303 CDPPI+RVD AAFAGR+LA +LH L A V CTRL +HA T NGEE +RVWRCA Sbjct 244 EVAQRCDPPIERVDMAAFAGRALAVQLHEKLAGANVACTRLRVHARTENGEEHARVWRCA 303 Query 304 EPLTEDATADRVRWQLDGWLNNRNARDRPTAAVTLLRLQAVETVSASEGLQLPLWGGLGE 363 EPLT + TADRVRWQLDGWL + + PTA +T LRL+ VE VS S LQL LWGG+GE Sbjct 304 EPLTPEGTADRVRWQLDGWLTGHH-QSSPTAGITWLRLEPVEVVS-SGALQLGLWGGVGE 361 Query 364 QDRLRARRALVRVQGLLGPEAVRVPVLSGGHGPAERITLTVLGLVAPEPVPQADPGQPWP 423 D RARRAL+RVQGLLG +AVR+ V SGG G AER+TL LG E VP +DP PWP Sbjct 362 -DEERARRALIRVQGLLGGDAVRIGVQSGGRGTAERVTLIPLG---DEQVPASDPAAPWP 417 Query 424 GRLPDPSPAVLFD--DPVDLLDAQGNPIRVTSRGMFSADPARLRVRGRDDRLRWWAGPWP 481 G+LP+P+P+ ++D V LLD + + VT RG+ +A+P L + + WAGPW Sbjct 418 GKLPEPAPSEVYDPAPEVALLDERRREVLVTGRGILTAEPHTLMWDKDECSIEAWAGPWC 477 Query 482 DDERWWDPDRASGRTARAQVLLDGDPGTALLLCYRQRRWYLEGSY 526 DE WWD A R AR ++L + ALL+ W +EG + Sbjct 478 VDENWWDAGSAQ-RAARLEILTENR--GALLVKCTAGIWNVEGRW 519 >gi|343928293|ref|ZP_08767746.1| hypothetical protein GOALK_112_00300 [Gordonia alkanivorans NBRC 16433] gi|343761823|dbj|GAA14672.1| hypothetical protein GOALK_112_00300 [Gordonia alkanivorans NBRC 16433] Length=548 Score = 486 bits (1251), Expect = 4e-135, Method: Compositional matrix adjust. Identities = 290/550 (53%), Positives = 352/550 (64%), Gaps = 38/550 (6%) Query 6 RVLAIWCMDWPAVAAAAAAGLSATAPVAVTLANRVIACSATARAAGVRRGLRRREAAARC 65 R LA+WC DWPA+AAAA A L PVAV ANRV+ACS+TARA GVRRG+R+R+A A C Sbjct 9 RTLALWCPDWPAMAAAAEADLPPLHPVAVLSANRVVACSSTARAVGVRRGMRKRQAQALC 68 Query 66 PQLFIATADADRDARLFEGVIAAVDDLVPRAELLRPGLLVLPVRGPARFFGSEQMAAERL 125 P++ + AD RD RLF+ V+AAV D++P E+LRPGLLV+P AR+FG + AE L Sbjct 69 PEMTVVAADEVRDGRLFDPVVAAVADVIPTLEVLRPGLLVIPGDRAARYFGGMEALAEEL 128 Query 126 IDAVAAAGAECQVGIADRLSTAVFAARAGRIVEPGGDARFLSLLSIRQLATEPSLSGPGR 185 +D V+A G E QVGIAD + TAV AAR G VEPGGD +L+ I LA EPS+S P R Sbjct 129 VDVVSACGIESQVGIADEIFTAVLAARRGHQVEPGGDRAYLAGRPIADLALEPSMSDPSR 188 Query 186 DDLTDLLWRMGIRTIGQFAALSRTDVASRFGADAVAAHRFARGEPERAPCGREPPPDLAA 245 +L DLL R+GI TIG FA + DVA+RF DAV AHR A P R P GR P +L Sbjct 189 VELVDLLRRLGIGTIGAFAEMDIADVATRFARDAVLAHRLANALPGRVPSGRHLPAELDV 248 Query 246 ELACDPPIDRVDAAAFAGRSLAAELHRALMAAGVGCTRLAIHAVTANGEERSRVWRCAEP 305 + CDPP+DR+DAAAF GR+LA +LH+ L A V CTRL I A T G++ SR W CA+P Sbjct 249 DHTCDPPVDRIDAAAFIGRTLAEKLHQRLRDAAVACTRLTIEATTERGQQHSRTWNCAQP 308 Query 306 LTEDATADRVRWQLDGWLN-----NRNAR-----DRPTAAVTLLRLQAVETVSA---SEG 352 LT + TADR+RWQL+GWL N AR RP + + LRL+ VE V A Sbjct 309 LTPETTADRIRWQLEGWLTGGRRGNSRARGQVKDTRPDSPIVRLRLEPVEVVEAGALHYQ 368 Query 353 LQLPLWGG--LGEQDRLRARRALVRVQGLLGPEAVRVPVLSGGHGPAERITLTVLGLVAP 410 L L GG + RARR+LVR+QGLLG +AVR+PVLSGG GPAERIT+ LG Sbjct 369 LTETLAGGSAVDPDVEERARRSLVRIQGLLGGDAVRIPVLSGGRGPAERITMVSLG---D 425 Query 411 EPVPQADPGQPWPGRLPDPSPAVLFDDPVDLLDAQGNPIRVTSRGMFSADPARLRV---- 466 E P+ DP PWPG LP P+P VL + + +LDA G P+RVT RG F+A+P +R+ Sbjct 426 ERTPRRDPSAPWPGHLPQPTPTVLVETAISVLDALGQPVRVTDRGAFTAEPVTVRLSETT 485 Query 467 ---RGRDDR--LRWWAGPWPDDERWWDPDRASGR----TARAQVLLDGDPGTALLLCYRQ 517 +GR L WWAGPWP DRAS ARAQVLLD ALLLCYR Sbjct 486 GGGKGRKTSWGLCWWAGPWPVGM-----DRASAAGTELIARAQVLLDDS--RALLLCYRG 538 Query 518 RRWYLEGSYE 527 W +EG YE Sbjct 539 GEWIVEGVYE 548 >gi|326381917|ref|ZP_08203610.1| hypothetical protein SCNU_03197 [Gordonia neofelifaecis NRRL B-59395] gi|326199343|gb|EGD56524.1| hypothetical protein SCNU_03197 [Gordonia neofelifaecis NRRL B-59395] Length=541 Score = 484 bits (1245), Expect = 2e-134, Method: Compositional matrix adjust. Identities = 288/552 (53%), Positives = 346/552 (63%), Gaps = 45/552 (8%) Query 1 VMASARVLAIWCMDWPAVAAAAAAGLSATAPVAVTLANRVIACSATARAAGVRRGLRRRE 60 V + RVLA+WC DWP AAAA AG S PVAV A RV ACS ARA GVRRG+R+R+ Sbjct 10 VPSGKRVLALWCPDWPTTAAAAEAGRSPHDPVAVLRAGRVEACSHAARAGGVRRGMRKRQ 69 Query 61 AAARCPQLFIATADADRDARLFEGVIAAVDDLVPRAELLRPGLLVLPVRGPARFFGSEQM 120 + + CP+L + AD+ RD RLFE V+AAV ++VP E+LRPGLLV+ ARFFG E++ Sbjct 70 SQSLCPELTVYEADSARDGRLFEPVVAAVTEVVPMTEVLRPGLLVMAADRAARFFGGEEL 129 Query 121 AAERLIDAVAA---------------AGAECQVGIADRLSTAVFAARAGRIVEPGGDARF 165 AERL D VA G +VG+AD L TAV AAR+G+ V PG DA + Sbjct 130 LAERLADVVAGVGRGEEADGRGRAVIGGVTARVGVADELFTAVLAARSGQTVSPGSDAAY 189 Query 166 LSLLSIRQLATEPSLSGPGRDDLTDLLWRMGIRTIGQFAALSRTDVASRFGADAVAAHRF 225 LS + L EP+LSGPGR+DL +LLWR+GIR +G FA + DVASRF +DAV AHR Sbjct 190 LSTRPVADLVVEPALSGPGREDLVNLLWRLGIRRLGAFAEMDAADVASRFSSDAVTAHRL 249 Query 226 ARGEPERAPCGREPPPDLAAELACDPPIDRVDAAAFAGRSLAAELHRALMAAGVGCTRLA 285 ARG P R P PP L E CDPPIDR+DAAAF GR +A ELH L +A + C RL Sbjct 250 ARGLPGRRPSRAPIPPGLEVEHVCDPPIDRIDAAAFLGRRMAQELHERLSSAALACMRLT 309 Query 286 IHAVTANGEERSRVWRCAEPLTEDATADRVRWQLDGWLNNR-NARDRPTAAVTLLRLQAV 344 IHA T G+ SR WRC EPLT +ATADRVRWQL+GWL R + D P + V L L+ V Sbjct 310 IHAFTERGQRHSRTWRCVEPLTPEATADRVRWQLEGWLTGRAGSVDAPDSPVVRLVLEPV 369 Query 345 ETVSASEGLQLPL---------WGGLGEQDRLRARRALVRVQGLLGPEAVRVPVLSGGHG 395 E V+ S GLQ L GGLG+Q ARRALVRVQGLLG EAVRVPV SGG G Sbjct 370 EVVNPS-GLQYALSGAGLPGEVGGGLGDQ----ARRALVRVQGLLGGEAVRVPVRSGGRG 424 Query 396 PAERITLTVLGLVAPEPVPQADPGQPWPGRLPDPSPAVLFDDPVDLLDAQGNPIRVTSRG 455 P E++TL G E P DP WP RL P+P++L ++ DA P+ V RG Sbjct 425 PDEQVTLVAFG---DELRPPRDPTATWPDRLARPAPSLLVQAGAEVRDAADRPVTVNPRG 481 Query 456 MFSADPARLRVRGRDDRLRWWAGPWPDDERWWDPDRASGRTARAQVLLDGDPGTALLLCY 515 FSA+P +R+ R RLRWWAGPWP + P TARAQ+LL G A+LLC Sbjct 482 AFSAEPVTVRLGARSYRLRWWAGPWP-----FGPG-----TARAQMLLAD--GRAVLLCC 529 Query 516 RQRRWYLEGSYE 527 R+ W +EG YE Sbjct 530 REAEWAVEGIYE 541 >gi|134103091|ref|YP_001108752.1| putative DNA-directed DNA polymerase [Saccharopolyspora erythraea NRRL 2338] gi|133915714|emb|CAM05827.1| putative DNA-directed DNA polymerase [Saccharopolyspora erythraea NRRL 2338] Length=527 Score = 455 bits (1170), Expect = 9e-126, Method: Compositional matrix adjust. Identities = 282/534 (53%), Positives = 341/534 (64%), Gaps = 17/534 (3%) Query 2 MASARVLAIWCMDWPAVAAAAAAGLSATAPVAVTLANRVIACSATARAAGVRRGLRRREA 61 M R L +WC DWP VAA AAGL AP AV +ANRV+ACS TAR GVRRG+RRREA Sbjct 1 MPPPRRLVVWCPDWPVVAAVLAAGLDPVAPAAVFVANRVLACSQTARDNGVRRGMRRREA 60 Query 62 AARCPQLFIATADADRDARLFEGVIAAVDDLVPRAELLRPGLLVLPVRGPARFFGSEQMA 121 RCP L + D RDARLFE V+AAV+ L P E++RPGL+ +P +GPA +FGSE A Sbjct 61 QGRCPDLAVCEHDPARDARLFEPVVAAVESLAPGVEVVRPGLVAVPAKGPAGYFGSEVDA 120 Query 122 AERLIDAVAA-AGAECQVGIADRLSTAVFAARAGRIVEPGGDARFLSLLSIRQLATEPSL 180 AER++D VAA A AECQVG+AD L A+ AAR G +VEPGG FL+ + I ++ Sbjct 121 AERVVDEVAARADAECQVGVADGLFAAILAARRGVVVEPGGGPGFLAPMRIDEI----DY 176 Query 181 SGPGRDDLTDLLWRMGIRTIGQFAALSRTDVASRFGADAVAAHRFARGEPERAPCGREPP 240 G R +L DLL R+GIRT+G FAAL +DVA+RFG DA+ AHR A G ER P R P Sbjct 177 PGVDRGELVDLLRRLGIRTLGDFAALPASDVATRFGRDALVAHRAASGREERPPERRALP 236 Query 241 PDLAAELACDPPIDRVDAAAFAGRSLAAELHRALMAAGVGCTRLAIHAVTANGEERSRVW 300 PDL + DPP++RVDAAAF ++LA LH L G+ CTRL I A T +GEE R+W Sbjct 237 PDLVVSESLDPPVERVDAAAFVAKALAERLHVRLGELGLACTRLGISARTEHGEELHRMW 296 Query 301 RCAEPLTEDATADRVRWQLDGWLNNRNARDRPTAAVTLLRLQAVETVSASEGLQLPLWGG 360 RCAEPLT TADRVRWQLDGWL+ R RPTA V LL L E V A LQL L Sbjct 297 RCAEPLTPSGTADRVRWQLDGWLSGRRGAQRPTAGVELLSLHPDEVVGAG-ALQLDLVNS 355 Query 361 LGEQDRLRARRALVRVQGLLGPEAVRVPVLSGGHGPAERITLTVLGLVAPEPVPQADPGQ 420 + RA RA VRVQG+LGP+AV V VL GG +R+ L G E VP DP + Sbjct 356 ATGEADARAGRAFVRVQGMLGPDAVLVGVLGGGRDLRDRVRLVPWG---DERVPTLDPER 412 Query 421 PWPGRLPDPSPAVLFDD--PVDLLDAQGNPIRVTSRGMFSADPARLRVR-GRDDRLRWWA 477 PWPGR+P PSPAVL D P +LDA P+R+T R +A P R+ V GR +R WA Sbjct 413 PWPGRIPAPSPAVLPDSPWPAAVLDADEQPVRITDRHRLTAAPVRVVVSGGRSRTVRGWA 472 Query 478 GPWPDDERWWDPDRASG--RTARAQVLL--DGDPG-TALLLCYRQRRWYLEGSY 526 GPWP +ERWW A R QV+L +G+ G ALLL + RW+++G+Y Sbjct 473 GPWPVEERWWSESAALAPRLVTRVQVVLEAEGEVGEVALLLVHEDGRWWVQGAY 526 >gi|308406146|ref|ZP_07495286.2| hypothetical protein TMLG_02983 [Mycobacterium tuberculosis SUMu012] gi|308364374|gb|EFP53225.1| hypothetical protein TMLG_02983 [Mycobacterium tuberculosis SUMu012] Length=229 Score = 452 bits (1163), Expect = 7e-125, Method: Compositional matrix adjust. Identities = 228/229 (99%), Positives = 229/229 (100%), Gaps = 0/229 (0%) Query 299 VWRCAEPLTEDATADRVRWQLDGWLNNRNARDRPTAAVTLLRLQAVETVSASEGLQLPLW 358 +WRCAEPLTEDATADRVRWQLDGWLNNRNARDRPTAAVTLLRLQAVETVSASEGLQLPLW Sbjct 1 MWRCAEPLTEDATADRVRWQLDGWLNNRNARDRPTAAVTLLRLQAVETVSASEGLQLPLW 60 Query 359 GGLGEQDRLRARRALVRVQGLLGPEAVRVPVLSGGHGPAERITLTVLGLVAPEPVPQADP 418 GGLGEQDRLRARRALVRVQGLLGPEAVRVPVLSGGHGPAERITLTVLGLVAPEPVPQADP Sbjct 61 GGLGEQDRLRARRALVRVQGLLGPEAVRVPVLSGGHGPAERITLTVLGLVAPEPVPQADP 120 Query 419 GQPWPGRLPDPSPAVLFDDPVDLLDAQGNPIRVTSRGMFSADPARLRVRGRDDRLRWWAG 478 GQPWPGRLPDPSPAVLFDDPVDLLDAQGNPIRVTSRGMFSADPARLRVRGRDDRLRWWAG Sbjct 121 GQPWPGRLPDPSPAVLFDDPVDLLDAQGNPIRVTSRGMFSADPARLRVRGRDDRLRWWAG 180 Query 479 PWPDDERWWDPDRASGRTARAQVLLDGDPGTALLLCYRQRRWYLEGSYE 527 PWPDDERWWDPDRASGRTARAQVLLDGDPGTALLLCYRQRRWYLEGSYE Sbjct 181 PWPDDERWWDPDRASGRTARAQVLLDGDPGTALLLCYRQRRWYLEGSYE 229 Lambda K H 0.322 0.136 0.425 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 1159267309268 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40