BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv3395A Length=208 Score E Sequences producing significant alignments: (Bits) Value gi|148824602|ref|YP_001289357.1| hypothetical protein TBFG_13430... 422 1e-116 gi|289555671|ref|ZP_06444881.1| membrane protein [Mycobacterium ... 421 3e-116 gi|15842989|ref|NP_338026.1| hypothetical protein MT3503 [Mycoba... 421 5e-116 gi|31794576|ref|NP_857069.1| hypothetical protein Mb3428 [Mycoba... 419 1e-115 gi|289449093|ref|ZP_06438837.1| membrane protein [Mycobacterium ... 417 3e-115 gi|289747222|ref|ZP_06506600.1| conserved hypothetical protein [... 296 1e-78 gi|289763577|ref|ZP_06522955.1| hypothetical membrane protein [M... 280 1e-73 gi|240167852|ref|ZP_04746511.1| hypothetical protein MkanA1_0095... 236 2e-60 gi|183981171|ref|YP_001849462.1| hypothetical protein MMAR_1149 ... 231 5e-59 gi|118616682|ref|YP_905014.1| hypothetical protein MUL_0914 [Myc... 229 1e-58 gi|289571632|ref|ZP_06451859.1| membrane protein [Mycobacterium ... 229 2e-58 gi|302538436|ref|ZP_07290778.1| conserved hypothetical protein [... 140 1e-31 gi|328887122|emb|CCA60361.1| hypothetical protein SVEN_7075 [Str... 139 2e-31 gi|169631750|ref|YP_001705399.1| hypothetical protein MAB_4677c ... 134 7e-30 gi|37595048|gb|AAQ94239.1| unknown [Saccharopolyspora erythraea] 123 1e-26 gi|134100681|ref|YP_001106342.1| hypothetical protein SACE_4148 ... 122 3e-26 gi|302520204|ref|ZP_07272546.1| conserved hypothetical protein [... 110 2e-22 gi|318061702|ref|ZP_07980423.1| hypothetical protein SSA3_27438 ... 107 1e-21 gi|333026046|ref|ZP_08454110.1| hypothetical protein STTU_3550 [... 106 3e-21 gi|318079665|ref|ZP_07986997.1| hypothetical protein SSA3_23986 ... 101 8e-20 gi|111219823|ref|YP_710617.1| putative branched chain amino acid... 38.9 0.44 gi|312219773|emb|CBX99715.1| similar to fatty acid synthase beta... 35.8 4.5 gi|189204113|ref|XP_001938392.1| conserved hypothetical protein ... 35.0 6.2 gi|326446723|ref|ZP_08221457.1| hypothetical protein SclaA2_3690... 35.0 7.0 gi|227504004|ref|ZP_03934053.1| L-aminopeptidase/D-esterase [Cor... 35.0 7.3 gi|299470765|emb|CBN79811.1| aspartyl/glutamyl-tRNA amidotransfe... 35.0 7.6 gi|171683419|ref|XP_001906652.1| hypothetical protein [Podospora... 35.0 7.7 >gi|148824602|ref|YP_001289357.1| hypothetical protein TBFG_13430 [Mycobacterium tuberculosis F11] gi|167968719|ref|ZP_02550996.1| hypothetical membrane protein [Mycobacterium tuberculosis H37Ra] gi|253800442|ref|YP_003033443.1| hypothetical protein TBMG_03446 [Mycobacterium tuberculosis KZN 1435] 25 more sequence titles Length=236 Score = 422 bits (1086), Expect = 1e-116, Method: Compositional matrix adjust. Identities = 208/208 (100%), Positives = 208/208 (100%), Gaps = 0/208 (0%) Query 1 VQSRKTTSVLAAALLFCGLLGPGTAPPATGGGPACRPAELFATDNTTDGFELPAVATIAL 60 VQSRKTTSVLAAALLFCGLLGPGTAPPATGGGPACRPAELFATDNTTDGFELPAVATIAL Sbjct 29 VQSRKTTSVLAAALLFCGLLGPGTAPPATGGGPACRPAELFATDNTTDGFELPAVATIAL 88 Query 61 TGTVVTGSTLVDGVFWSNERQQIGYERSREFHLCVVDAPTLHNAAEALHRQFNQEAVLTF 120 TGTVVTGSTLVDGVFWSNERQQIGYERSREFHLCVVDAPTLHNAAEALHRQFNQEAVLTF Sbjct 89 TGTVVTGSTLVDGVFWSNERQQIGYERSREFHLCVVDAPTLHNAAEALHRQFNQEAVLTF 148 Query 121 DYLPQNAPEADAILITVPDIGIARFRDAFASDLAAHHRLRGGSVTTADHTLILVAGNGDL 180 DYLPQNAPEADAILITVPDIGIARFRDAFASDLAAHHRLRGGSVTTADHTLILVAGNGDL Sbjct 149 DYLPQNAPEADAILITVPDIGIARFRDAFASDLAAHHRLRGGSVTTADHTLILVAGNGDL 208 Query 181 DVARRLVEEAGGDWNATTIAHGRREFVN 208 DVARRLVEEAGGDWNATTIAHGRREFVN Sbjct 209 DVARRLVEEAGGDWNATTIAHGRREFVN 236 >gi|289555671|ref|ZP_06444881.1| membrane protein [Mycobacterium tuberculosis KZN 605] gi|289440303|gb|EFD22796.1| membrane protein [Mycobacterium tuberculosis KZN 605] Length=219 Score = 421 bits (1083), Expect = 3e-116, Method: Compositional matrix adjust. Identities = 208/208 (100%), Positives = 208/208 (100%), Gaps = 0/208 (0%) Query 1 VQSRKTTSVLAAALLFCGLLGPGTAPPATGGGPACRPAELFATDNTTDGFELPAVATIAL 60 VQSRKTTSVLAAALLFCGLLGPGTAPPATGGGPACRPAELFATDNTTDGFELPAVATIAL Sbjct 12 VQSRKTTSVLAAALLFCGLLGPGTAPPATGGGPACRPAELFATDNTTDGFELPAVATIAL 71 Query 61 TGTVVTGSTLVDGVFWSNERQQIGYERSREFHLCVVDAPTLHNAAEALHRQFNQEAVLTF 120 TGTVVTGSTLVDGVFWSNERQQIGYERSREFHLCVVDAPTLHNAAEALHRQFNQEAVLTF Sbjct 72 TGTVVTGSTLVDGVFWSNERQQIGYERSREFHLCVVDAPTLHNAAEALHRQFNQEAVLTF 131 Query 121 DYLPQNAPEADAILITVPDIGIARFRDAFASDLAAHHRLRGGSVTTADHTLILVAGNGDL 180 DYLPQNAPEADAILITVPDIGIARFRDAFASDLAAHHRLRGGSVTTADHTLILVAGNGDL Sbjct 132 DYLPQNAPEADAILITVPDIGIARFRDAFASDLAAHHRLRGGSVTTADHTLILVAGNGDL 191 Query 181 DVARRLVEEAGGDWNATTIAHGRREFVN 208 DVARRLVEEAGGDWNATTIAHGRREFVN Sbjct 192 DVARRLVEEAGGDWNATTIAHGRREFVN 219 >gi|15842989|ref|NP_338026.1| hypothetical protein MT3503 [Mycobacterium tuberculosis CDC1551] gi|254233997|ref|ZP_04927322.1| hypothetical protein TBCG_03338 [Mycobacterium tuberculosis C] gi|13883329|gb|AAK47840.1| hypothetical protein MT3503 [Mycobacterium tuberculosis CDC1551] gi|124599526|gb|EAY58630.1| hypothetical protein TBCG_03338 [Mycobacterium tuberculosis C] gi|326905239|gb|EGE52172.1| membrane protein [Mycobacterium tuberculosis W-148] gi|328460174|gb|AEB05597.1| membrane protein [Mycobacterium tuberculosis KZN 4207] Length=213 Score = 421 bits (1081), Expect = 5e-116, Method: Compositional matrix adjust. Identities = 208/208 (100%), Positives = 208/208 (100%), Gaps = 0/208 (0%) Query 1 VQSRKTTSVLAAALLFCGLLGPGTAPPATGGGPACRPAELFATDNTTDGFELPAVATIAL 60 VQSRKTTSVLAAALLFCGLLGPGTAPPATGGGPACRPAELFATDNTTDGFELPAVATIAL Sbjct 6 VQSRKTTSVLAAALLFCGLLGPGTAPPATGGGPACRPAELFATDNTTDGFELPAVATIAL 65 Query 61 TGTVVTGSTLVDGVFWSNERQQIGYERSREFHLCVVDAPTLHNAAEALHRQFNQEAVLTF 120 TGTVVTGSTLVDGVFWSNERQQIGYERSREFHLCVVDAPTLHNAAEALHRQFNQEAVLTF Sbjct 66 TGTVVTGSTLVDGVFWSNERQQIGYERSREFHLCVVDAPTLHNAAEALHRQFNQEAVLTF 125 Query 121 DYLPQNAPEADAILITVPDIGIARFRDAFASDLAAHHRLRGGSVTTADHTLILVAGNGDL 180 DYLPQNAPEADAILITVPDIGIARFRDAFASDLAAHHRLRGGSVTTADHTLILVAGNGDL Sbjct 126 DYLPQNAPEADAILITVPDIGIARFRDAFASDLAAHHRLRGGSVTTADHTLILVAGNGDL 185 Query 181 DVARRLVEEAGGDWNATTIAHGRREFVN 208 DVARRLVEEAGGDWNATTIAHGRREFVN Sbjct 186 DVARRLVEEAGGDWNATTIAHGRREFVN 213 >gi|31794576|ref|NP_857069.1| hypothetical protein Mb3428 [Mycobacterium bovis AF2122/97] gi|57117103|ref|YP_177969.1| hypothetical protein Rv3395A [Mycobacterium tuberculosis H37Rv] gi|121639320|ref|YP_979544.1| hypothetical protein BCG_3465 [Mycobacterium bovis BCG str. Pasteur 1173P2] 35 more sequence titles Length=208 Score = 419 bits (1077), Expect = 1e-115, Method: Compositional matrix adjust. Identities = 207/208 (99%), Positives = 208/208 (100%), Gaps = 0/208 (0%) Query 1 VQSRKTTSVLAAALLFCGLLGPGTAPPATGGGPACRPAELFATDNTTDGFELPAVATIAL 60 +QSRKTTSVLAAALLFCGLLGPGTAPPATGGGPACRPAELFATDNTTDGFELPAVATIAL Sbjct 1 MQSRKTTSVLAAALLFCGLLGPGTAPPATGGGPACRPAELFATDNTTDGFELPAVATIAL 60 Query 61 TGTVVTGSTLVDGVFWSNERQQIGYERSREFHLCVVDAPTLHNAAEALHRQFNQEAVLTF 120 TGTVVTGSTLVDGVFWSNERQQIGYERSREFHLCVVDAPTLHNAAEALHRQFNQEAVLTF Sbjct 61 TGTVVTGSTLVDGVFWSNERQQIGYERSREFHLCVVDAPTLHNAAEALHRQFNQEAVLTF 120 Query 121 DYLPQNAPEADAILITVPDIGIARFRDAFASDLAAHHRLRGGSVTTADHTLILVAGNGDL 180 DYLPQNAPEADAILITVPDIGIARFRDAFASDLAAHHRLRGGSVTTADHTLILVAGNGDL Sbjct 121 DYLPQNAPEADAILITVPDIGIARFRDAFASDLAAHHRLRGGSVTTADHTLILVAGNGDL 180 Query 181 DVARRLVEEAGGDWNATTIAHGRREFVN 208 DVARRLVEEAGGDWNATTIAHGRREFVN Sbjct 181 DVARRLVEEAGGDWNATTIAHGRREFVN 208 >gi|289449093|ref|ZP_06438837.1| membrane protein [Mycobacterium tuberculosis CPHL_A] gi|289422051|gb|EFD19252.1| membrane protein [Mycobacterium tuberculosis CPHL_A] Length=208 Score = 417 bits (1073), Expect = 3e-115, Method: Compositional matrix adjust. Identities = 206/208 (99%), Positives = 208/208 (100%), Gaps = 0/208 (0%) Query 1 VQSRKTTSVLAAALLFCGLLGPGTAPPATGGGPACRPAELFATDNTTDGFELPAVATIAL 60 +QSRKTTSVLAAALLFCGLLGPGTAPPATGGGPACRPAELFATDNTTDGFELPAVATIAL Sbjct 1 MQSRKTTSVLAAALLFCGLLGPGTAPPATGGGPACRPAELFATDNTTDGFELPAVATIAL 60 Query 61 TGTVVTGSTLVDGVFWSNERQQIGYERSREFHLCVVDAPTLHNAAEALHRQFNQEAVLTF 120 TGTVVTGSTLVDGVFWSNERQQIGYERSREFHLCVV+APTLHNAAEALHRQFNQEAVLTF Sbjct 61 TGTVVTGSTLVDGVFWSNERQQIGYERSREFHLCVVEAPTLHNAAEALHRQFNQEAVLTF 120 Query 121 DYLPQNAPEADAILITVPDIGIARFRDAFASDLAAHHRLRGGSVTTADHTLILVAGNGDL 180 DYLPQNAPEADAILITVPDIGIARFRDAFASDLAAHHRLRGGSVTTADHTLILVAGNGDL Sbjct 121 DYLPQNAPEADAILITVPDIGIARFRDAFASDLAAHHRLRGGSVTTADHTLILVAGNGDL 180 Query 181 DVARRLVEEAGGDWNATTIAHGRREFVN 208 DVARRLVEEAGGDWNATTIAHGRREFVN Sbjct 181 DVARRLVEEAGGDWNATTIAHGRREFVN 208 >gi|289747222|ref|ZP_06506600.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987] gi|289687750|gb|EFD55238.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987] Length=145 Score = 296 bits (759), Expect = 1e-78, Method: Compositional matrix adjust. Identities = 144/145 (99%), Positives = 145/145 (100%), Gaps = 0/145 (0%) Query 64 VVTGSTLVDGVFWSNERQQIGYERSREFHLCVVDAPTLHNAAEALHRQFNQEAVLTFDYL 123 +VTGSTLVDGVFWSNERQQIGYERSREFHLCVVDAPTLHNAAEALHRQFNQEAVLTFDYL Sbjct 1 MVTGSTLVDGVFWSNERQQIGYERSREFHLCVVDAPTLHNAAEALHRQFNQEAVLTFDYL 60 Query 124 PQNAPEADAILITVPDIGIARFRDAFASDLAAHHRLRGGSVTTADHTLILVAGNGDLDVA 183 PQNAPEADAILITVPDIGIARFRDAFASDLAAHHRLRGGSVTTADHTLILVAGNGDLDVA Sbjct 61 PQNAPEADAILITVPDIGIARFRDAFASDLAAHHRLRGGSVTTADHTLILVAGNGDLDVA 120 Query 184 RRLVEEAGGDWNATTIAHGRREFVN 208 RRLVEEAGGDWNATTIAHGRREFVN Sbjct 121 RRLVEEAGGDWNATTIAHGRREFVN 145 >gi|289763577|ref|ZP_06522955.1| hypothetical membrane protein [Mycobacterium tuberculosis GM 1503] gi|289711083|gb|EFD75099.1| hypothetical membrane protein [Mycobacterium tuberculosis GM 1503] Length=179 Score = 280 bits (716), Expect = 1e-73, Method: Compositional matrix adjust. Identities = 137/137 (100%), Positives = 137/137 (100%), Gaps = 0/137 (0%) Query 1 VQSRKTTSVLAAALLFCGLLGPGTAPPATGGGPACRPAELFATDNTTDGFELPAVATIAL 60 VQSRKTTSVLAAALLFCGLLGPGTAPPATGGGPACRPAELFATDNTTDGFELPAVATIAL Sbjct 29 VQSRKTTSVLAAALLFCGLLGPGTAPPATGGGPACRPAELFATDNTTDGFELPAVATIAL 88 Query 61 TGTVVTGSTLVDGVFWSNERQQIGYERSREFHLCVVDAPTLHNAAEALHRQFNQEAVLTF 120 TGTVVTGSTLVDGVFWSNERQQIGYERSREFHLCVVDAPTLHNAAEALHRQFNQEAVLTF Sbjct 89 TGTVVTGSTLVDGVFWSNERQQIGYERSREFHLCVVDAPTLHNAAEALHRQFNQEAVLTF 148 Query 121 DYLPQNAPEADAILITV 137 DYLPQNAPEADAILITV Sbjct 149 DYLPQNAPEADAILITV 165 >gi|240167852|ref|ZP_04746511.1| hypothetical protein MkanA1_00950 [Mycobacterium kansasii ATCC 12478] Length=217 Score = 236 bits (601), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 121/199 (61%), Positives = 139/199 (70%), Gaps = 17/199 (8%) Query 27 PATGGGPACRPAELFATDNT-----------------TDGFELPAVATIALTGTVVTGST 69 PA+ +C+PAELFATDNT + FE AV TIA TG V GST Sbjct 18 PASSAAGSCQPAELFATDNTWVITGSDAKATGQLHGDLEPFERQAVVTIAQTGAEVRGST 77 Query 70 LVDGVFWSNERQQIGYERSREFHLCVVDAPTLHNAAEALHRQFNQEAVLTFDYLPQNAPE 129 LVDGVFWS QQI YER+R+FHLCVVD PTLH AAEA++RQF+QE LTF+YLPQ AP Sbjct 78 LVDGVFWSATLQQIAYERARQFHLCVVDEPTLHTAAEAMNRQFHQETALTFEYLPQGAPR 137 Query 130 ADAILITVPDIGIARFRDAFASDLAAHHRLRGGSVTTADHTLILVAGNGDLDVARRLVEE 189 ADA+LI VP I +ARF DA +D AA RL GGS+TTAD TL+LVA N DLD+AR LVE+ Sbjct 138 ADAMLIAVPGIDLARFGDALTADSAARQRLLGGSITTADRTLLLVAANRDLDIARHLVEQ 197 Query 190 AGGDWNATTIAHGRREFVN 208 AGG W A TI +GRRE V Sbjct 198 AGGSWTAATINYGRRELVQ 216 >gi|183981171|ref|YP_001849462.1| hypothetical protein MMAR_1149 [Mycobacterium marinum M] gi|183174497|gb|ACC39607.1| conserved hypothetical secreted protein [Mycobacterium marinum M] Length=229 Score = 231 bits (589), Expect = 5e-59, Method: Compositional matrix adjust. Identities = 131/222 (60%), Positives = 151/222 (69%), Gaps = 15/222 (6%) Query 1 VQSRKTTSVLAAALLFCGLLGPGTAP-PATGGGPACRPAELFATDNT---TDG------- 49 V+SR+T S LAA L+ CG AP PA G PACRPAE+FAT+NT TD Sbjct 6 VRSRRTLSALAALLVACGGSSSWVAPAPARGEEPACRPAEIFATNNTAVSTDPDSSQSHD 65 Query 50 ----FELPAVATIALTGTVVTGSTLVDGVFWSNERQQIGYERSREFHLCVVDAPTLHNAA 105 FE+ A ATIA G +TGS LV+GV WS+E Q YERSREFH+CVVDAPTLHN A Sbjct 66 QLQLFEMQAAATIAQNGAAMTGSRLVNGVLWSDELHQNTYERSREFHVCVVDAPTLHNVA 125 Query 106 EALHRQFNQEAVLTFDYLPQNAPEADAILITVPDIGIARFRDAFASDLAAHHRLRGGSVT 165 EAL QF+Q +VLTF+YLPQ AP A+A I VPDI R A +D A RL GGS++ Sbjct 126 EALRNQFDQGSVLTFEYLPQGAPAANAFTIDVPDIDAPRLGQALMADAVARDRLLGGSIS 185 Query 166 TADHTLILVAGNGDLDVARRLVEEAGGDWNATTIAHGRREFV 207 T DHTLILVAGN D+D+ARRLV EAGG W A TI +GRRE V Sbjct 186 TDDHTLILVAGNDDVDIARRLVNEAGGCWRAATITYGRRELV 227 >gi|118616682|ref|YP_905014.1| hypothetical protein MUL_0914 [Mycobacterium ulcerans Agy99] gi|118568792|gb|ABL03543.1| conserved hypothetical secreted protein [Mycobacterium ulcerans Agy99] Length=229 Score = 229 bits (585), Expect = 1e-58, Method: Compositional matrix adjust. Identities = 130/222 (59%), Positives = 150/222 (68%), Gaps = 15/222 (6%) Query 1 VQSRKTTSVLAAALLFCGLLGPGTAP-PATGGGPACRPAELFATDNT---TDG------- 49 V+SR+T S LAA L+ CG AP PA G PACRPAE+FAT+NT TD Sbjct 6 VRSRRTLSALAALLVACGGSSSWVAPAPARGEEPACRPAEIFATNNTAVSTDPDSSQSHD 65 Query 50 ----FELPAVATIALTGTVVTGSTLVDGVFWSNERQQIGYERSREFHLCVVDAPTLHNAA 105 FE+ A ATIA G +TGS LV+GV WS+E Q YERSREFH+CVVDAPTLHN A Sbjct 66 QLQLFEMQAAATIAQNGAAMTGSRLVNGVLWSDELHQNTYERSREFHVCVVDAPTLHNVA 125 Query 106 EALHRQFNQEAVLTFDYLPQNAPEADAILITVPDIGIARFRDAFASDLAAHHRLRGGSVT 165 EAL QF+Q +VLTF+YLPQ AP A+A I VPDI R A +D A RL GGS++ Sbjct 126 EALRNQFDQGSVLTFEYLPQGAPAANAFTIDVPDIDAPRLGQALMADAVARDRLLGGSIS 185 Query 166 TADHTLILVAGNGDLDVARRLVEEAGGDWNATTIAHGRREFV 207 T DHTLILVAGN D+D+ARRLV EAGG W TI +GRRE V Sbjct 186 TDDHTLILVAGNDDVDIARRLVNEAGGCWRTATITYGRRELV 227 >gi|289571632|ref|ZP_06451859.1| membrane protein [Mycobacterium tuberculosis T17] gi|289545386|gb|EFD49034.1| membrane protein [Mycobacterium tuberculosis T17] Length=117 Score = 229 bits (583), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 111/115 (97%), Positives = 114/115 (99%), Gaps = 0/115 (0%) Query 1 VQSRKTTSVLAAALLFCGLLGPGTAPPATGGGPACRPAELFATDNTTDGFELPAVATIAL 60 +QSRKTTSVLAAALLFCGLLGPGTAPPATGGGPACRPAELFATDNTTDGFELPAVATIAL Sbjct 1 MQSRKTTSVLAAALLFCGLLGPGTAPPATGGGPACRPAELFATDNTTDGFELPAVATIAL 60 Query 61 TGTVVTGSTLVDGVFWSNERQQIGYERSREFHLCVVDAPTLHNAAEALHRQFNQE 115 TGTVVTGSTLVDGVFWSNERQQIGYERSREFHLCVVDAPTLHNAAEALHRQF ++ Sbjct 61 TGTVVTGSTLVDGVFWSNERQQIGYERSREFHLCVVDAPTLHNAAEALHRQFIKK 115 >gi|302538436|ref|ZP_07290778.1| conserved hypothetical protein [Streptomyces sp. C] gi|302447331|gb|EFL19147.1| conserved hypothetical protein [Streptomyces sp. C] Length=221 Score = 140 bits (353), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 90/219 (42%), Positives = 113/219 (52%), Gaps = 20/219 (9%) Query 8 SVLAAALLFCGLLGPGTA-----PPATGGGPACRPAELFATDNT---TD----------- 48 +++A +L G GTA P + G C AE+FATDNT TD Sbjct 3 ALVAVGVLALASAGTGTAQADAPSPTSSGTGGCPAAEVFATDNTAVITDPADPRLRTHLL 62 Query 49 GFELPAVATIALTGTVVTGSTLVDGVFWSNERQQIGYERSREFHLCVVDAPTLHNAAEAL 108 F+ I G STL+DGVFWS E QQ YERSREF + VDA LH+ A+ + Sbjct 63 RFDREVREIIRSHGARTESSTLLDGVFWSEEEQQATYERSREFDVARVDANGLHHIADVI 122 Query 109 HRQFNQEAVLTFDYLPQNAPEADAILITVPDIGIARFRDAFASDLAAHHRLRGGSVTTAD 168 +Q+ QE+VLTF LP+ +PE DA+ I + R RDA +D A RL GGSV Sbjct 123 RKQYRQESVLTFRCLPRTSPETDAVEIQADGVSATRLRDALLADPVARERLGGGSVALGG 182 Query 169 HTLILVAGNGDLDVARRLVEEAGGDWNATTIAHGRREFV 207 LILVA DL +AR G DW + I +G EFV Sbjct 183 R-LILVAPLADLPLAREFTARLGVDWKSAEIRYGDEEFV 220 >gi|328887122|emb|CCA60361.1| hypothetical protein SVEN_7075 [Streptomyces venezuelae ATCC 10712] Length=225 Score = 139 bits (351), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 91/226 (41%), Positives = 123/226 (55%), Gaps = 22/226 (9%) Query 1 VQSRKTTSVLAAAL--LFCGLLGPGT--APPATGGGPACRPAELFATDNTT--------- 47 + +R+ +LA L L GL G + A PA G C AE+FATDNT+ Sbjct 4 IATRRRLRLLATGLAALVLGLTGTQSTYASPADQG---CPTAEIFATDNTSIITDPADPR 60 Query 48 -----DGFELPAVATIALTGTVVTGSTLVDGVFWSNERQQIGYERSREFHLCVVDAPTLH 102 F+ I G STL+DGVFWS++ +Q YERSREF + VD LH Sbjct 61 LRTRLTRFDHEVRTLIRAHGARPAASTLLDGVFWSDDLKQATYERSREFDVNRVDRDGLH 120 Query 103 NAAEALHRQFNQEAVLTFDYLPQNAPEADAILITVPDIGIARFRDAFASDLAAHHRLRGG 162 + A + ++++QE+VLTF LP+ +PE DA+ I VP + ++ RDA +D A +L GG Sbjct 121 HIAGVIAKEYDQESVLTFRCLPRTSPETDAVEIEVPGVRVSGLRDALVADPEAREKLGGG 180 Query 163 SVTTADHTLILVAGNGDLDVARRLVEEAGGDWNATTIAHGRREFVN 208 SVT D L+LVA +L AR V G DWN + +G REFVN Sbjct 181 SVTL-DGRLLLVAPIAELPFARTFVTGLGADWNEARVRYGDREFVN 225 >gi|169631750|ref|YP_001705399.1| hypothetical protein MAB_4677c [Mycobacterium abscessus ATCC 19977] gi|169243717|emb|CAM64745.1| Conserved hypothetical protein [Mycobacterium abscessus] Length=257 Score = 134 bits (338), Expect = 7e-30, Method: Compositional matrix adjust. Identities = 82/210 (40%), Positives = 110/210 (53%), Gaps = 21/210 (10%) Query 19 LLGPGTA-----PPATGGGPACRP-AELFATDNTT--------------DGFELPAVATI 58 ++GP + P A G RP ELFA++NT D F + A Sbjct 46 VVGPSSGYARADPQACVPGDVARPQGELFASNNTATITDPADARLQDPLDDFSVQVSAMT 105 Query 59 ALTGTVVTGSTLVDGVFWSNERQQIGYERSREFHLCVVDAPTLHNAAEALHRQFNQEAVL 118 + ST VDGV+WS + ++ YERSR F L VD L++ E + R+F QE+VL Sbjct 106 VQNLALPVRSTRVDGVYWSQDNDRMTYERSRAFELACVDGDDLYSIGEQVGRRFGQESVL 165 Query 119 TFDYLPQNAPEADAILITVPDIGIARFRDAFASDLAAHHRLRGGSVTTADHTLILVAGNG 178 TF+YLP +A+ + VP + RF D +D AA L GGSVT D LIL+A Sbjct 166 TFEYLPAGDARVNAVAVEVPGVDRVRFHDVLLTDPAARAALSGGSVTE-DGWLILIADVK 224 Query 179 DLDVARRLVEEAGGDWNATTIAHGRREFVN 208 D+ +ARRLV+ AGG W I +G+REFV Sbjct 225 DIGIARRLVDAAGGRWQDVAIQYGKREFVE 254 >gi|37595048|gb|AAQ94239.1| unknown [Saccharopolyspora erythraea] Length=220 Score = 123 bits (309), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 86/218 (40%), Positives = 113/218 (52%), Gaps = 22/218 (10%) Query 5 KTTSVLAAALLFCGLLGPGTAPPATGGGPACRP-AELFATDNT---TD-----------G 49 + + V +LLF GTA A PA P A LFAT NT TD Sbjct 9 RRSVVAVVSLLFA--FTAGTAQAA----PAEEPQALLFATSNTAVITDPGDPRLDTPLTE 62 Query 50 FELPAVATIALTGTVVTGSTLVDGVFWSNERQQIGYERSREFHLCVVDAPTLHNAAEALH 109 F I G S L+DGVFWS E Q+ YERSR F + D LH+ A+ + Sbjct 63 FARAVRGIIRDNGARDGRSELLDGVFWSGELQRATYERSRSFDVRETDPVELHHIADLVR 122 Query 110 RQFNQEAVLTFDYLPQNAPEADAILITVPDIGIARFRDAFASDLAAHHRLRGGSVTTADH 169 ++F QE+VLTF++LP+++ DA L+ VP + + D A+D A RL GGSVT D Sbjct 123 KEFGQESVLTFEHLPRDSARTDAFLVEVPGVDVTDLHDGLATDPQARERLGGGSVTM-DG 181 Query 170 TLILVAGNGDLDVARRLVEEAGGDWNATTIAHGRREFV 207 L+LVA DL++AR V GG W+ + +G REFV Sbjct 182 ELVLVAELADLELAREFVVRLGGRWDGAGLRYGDREFV 219 >gi|134100681|ref|YP_001106342.1| hypothetical protein SACE_4148 [Saccharopolyspora erythraea NRRL 2338] gi|291006515|ref|ZP_06564488.1| hypothetical protein SeryN2_18511 [Saccharopolyspora erythraea NRRL 2338] gi|133913304|emb|CAM03417.1| probable membrane protein [Saccharopolyspora erythraea NRRL 2338] Length=206 Score = 122 bits (307), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 63/140 (45%), Positives = 87/140 (63%), Gaps = 1/140 (0%) Query 68 STLVDGVFWSNERQQIGYERSREFHLCVVDAPTLHNAAEALHRQFNQEAVLTFDYLPQNA 127 S L+DGVFWS E Q+ YERSR F + D LH+ A+ + ++F QE+VLTF++LP+++ Sbjct 67 SELLDGVFWSGELQRATYERSRSFDVRETDPVELHHIADLVRKEFGQESVLTFEHLPRDS 126 Query 128 PEADAILITVPDIGIARFRDAFASDLAAHHRLRGGSVTTADHTLILVAGNGDLDVARRLV 187 DA L+ VP + + D A+D A RL GGSVT D L+LVA DL++AR V Sbjct 127 ARTDAFLVEVPGVDVTDLHDGLATDPQARERLGGGSVTM-DGELVLVAELADLELAREFV 185 Query 188 EEAGGDWNATTIAHGRREFV 207 GG W+ + +G REFV Sbjct 186 VRLGGRWDGAGLRYGDREFV 205 >gi|302520204|ref|ZP_07272546.1| conserved hypothetical protein [Streptomyces sp. SPB78] gi|302429099|gb|EFL00915.1| conserved hypothetical protein [Streptomyces sp. SPB78] Length=220 Score = 110 bits (274), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 75/200 (38%), Positives = 104/200 (52%), Gaps = 17/200 (8%) Query 25 APPATGGGPA--CRPAELFATDNT---TD-----------GFELPAVATIALTGTVVTGS 68 A PA GG C E+FAT+NT TD F+ I G S Sbjct 22 AAPARSGGAHRDCPSGEVFATNNTAVVTDPADPRLRTRLTRFDREVRGIIRAHGARPGAS 81 Query 69 TLVDGVFWSNERQQIGYERSREFHLCVVDAPTLHNAAEALHRQFNQEAVLTFDYLPQNAP 128 TL+DGVFWS ++ +ERSREF + L + A L ++++QE+VLTF LP++AP Sbjct 82 TLLDGVFWSAGLRKTTFERSREFDVDGTGRDGLRHLAGVLAKRYHQESVLTFRCLPRHAP 141 Query 129 EADAILITVPDIGIARFRDAFASDLAAHHRLRGGSVTTADHTLILVAGNGDLDVARRLVE 188 DA I P + A R+A + A L GGSVT D L+LV+ +L +AR+ + Sbjct 142 ATDAARIEAPGVSAAALREALRTHPGAREELGGGSVTE-DGRLVLVSPLEELPLARKFTK 200 Query 189 EAGGDWNATTIAHGRREFVN 208 + G DWN + +G REFV+ Sbjct 201 DLGVDWNTAEVRYGEREFVS 220 >gi|318061702|ref|ZP_07980423.1| hypothetical protein SSA3_27438 [Streptomyces sp. SA3_actG] Length=238 Score = 107 bits (267), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 75/200 (38%), Positives = 102/200 (51%), Gaps = 17/200 (8%) Query 25 APPATGGGPA--CRPAELFATDNT---TD-----------GFELPAVATIALTGTVVTGS 68 A PA GG C E+FAT+NT TD F+ I G S Sbjct 40 AAPARSGGAHRDCPSGEVFATNNTAVVTDPADPRLRTRLTRFDREVRGIIRAHGARPGAS 99 Query 69 TLVDGVFWSNERQQIGYERSREFHLCVVDAPTLHNAAEALHRQFNQEAVLTFDYLPQNAP 128 TL+DGVFWS +ERSREF + L + A L ++++QE+VLTF LP++AP Sbjct 100 TLLDGVFWSAGLGTTTFERSREFDVDGTGRDGLRHLAGVLAKRYHQESVLTFRCLPRHAP 159 Query 129 EADAILITVPDIGIARFRDAFASDLAAHHRLRGGSVTTADHTLILVAGNGDLDVARRLVE 188 DA I P + A R+A + A L GGSVT D L+LV+ +L +AR+ + Sbjct 160 ATDAARIEAPGVSAAALREALRTHPGAREELGGGSVTE-DGRLVLVSPLEELPLARKFTK 218 Query 189 EAGGDWNATTIAHGRREFVN 208 + G DWN + +G REFV+ Sbjct 219 DLGVDWNTAEVRYGEREFVS 238 >gi|333026046|ref|ZP_08454110.1| hypothetical protein STTU_3550 [Streptomyces sp. Tu6071] gi|332745898|gb|EGJ76339.1| hypothetical protein STTU_3550 [Streptomyces sp. Tu6071] Length=238 Score = 106 bits (264), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 74/200 (37%), Positives = 102/200 (51%), Gaps = 17/200 (8%) Query 25 APPATGGGPA--CRPAELFATDNT---TD-----------GFELPAVATIALTGTVVTGS 68 A PA GG C E+FAT+NT TD F+ I G S Sbjct 40 AAPARSGGAHRDCPSGEVFATNNTAVVTDPADPRLRTRLTRFDREVRGIIRAHGARPGAS 99 Query 69 TLVDGVFWSNERQQIGYERSREFHLCVVDAPTLHNAAEALHRQFNQEAVLTFDYLPQNAP 128 TL+DGVFWS + +ERSREF + L + A L ++++QE+VLTF LP++AP Sbjct 100 TLLDGVFWSAGLGKTTFERSREFDVDGTGRDGLRHLAGVLAKRYHQESVLTFRCLPRHAP 159 Query 129 EADAILITVPDIGIARFRDAFASDLAAHHRLRGGSVTTADHTLILVAGNGDLDVARRLVE 188 DA I P + A R+A + A L GGSVT D L+LV+ +L +A + + Sbjct 160 ATDAARIEAPGVSAAALREALRTHPGAREELGGGSVTE-DGRLVLVSPLEELPLAWKFTK 218 Query 189 EAGGDWNATTIAHGRREFVN 208 + G DWN + +G REFV+ Sbjct 219 DLGVDWNTAEVCYGEREFVS 238 >gi|318079665|ref|ZP_07986997.1| hypothetical protein SSA3_23986 [Streptomyces sp. SA3_actF] Length=157 Score = 101 bits (251), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 58/141 (42%), Positives = 82/141 (59%), Gaps = 1/141 (0%) Query 68 STLVDGVFWSNERQQIGYERSREFHLCVVDAPTLHNAAEALHRQFNQEAVLTFDYLPQNA 127 STL+DGVFWS +ERSREF + L + A L ++++QE+VLTF LP++A Sbjct 18 STLLDGVFWSAGLGTTTFERSREFDVDGTGRDGLRHLAGVLAKRYHQESVLTFRCLPRHA 77 Query 128 PEADAILITVPDIGIARFRDAFASDLAAHHRLRGGSVTTADHTLILVAGNGDLDVARRLV 187 P DA I P + A R+A + A L GGSVT D L+LV+ +L +AR+ Sbjct 78 PATDAARIEAPGVSAAALREALRTHPGAREELGGGSVTE-DGRLVLVSPLEELPLARKFT 136 Query 188 EEAGGDWNATTIAHGRREFVN 208 ++ G DWN + +G REFV+ Sbjct 137 KDLGVDWNTAEVRYGEREFVS 157 >gi|111219823|ref|YP_710617.1| putative branched chain amino acid ABC transporter ATP-binding protein [Frankia alni ACN14a] gi|111147355|emb|CAJ59006.1| putative branched chain amino acid ABC transporter ATP-binding protein [Frankia alni ACN14a] Length=940 Score = 38.9 bits (89), Expect = 0.44, Method: Compositional matrix adjust. Identities = 45/143 (32%), Positives = 59/143 (42%), Gaps = 16/143 (11%) Query 62 GTVVTGSTLVDGVFWSNERQ-QIGYERSREFHLCVVDAPTLHNAAEALHRQFNQEAVLTF 120 G V G T +DG WS ER+ + G RS + D L N A R+ + A +T Sbjct 718 GEVRLGETRIDG--WSRERRARAGLGRSFQSLELFEDLTVLENLQSACDRR-DSLAYVTN 774 Query 121 DYLPQNAPEADAILITVPDIGIARFRDAFASDLAAHHR--LRGGSVTTADHTLILV---- 174 +P A V D G+A F D DL HR L H+++L+ Sbjct 775 LVVPDRGRLTPAAWAAVADFGLAPFLDTPVQDLGYAHRRMLAVARAVAGGHSVLLLDEPA 834 Query 175 AGNGDLD------VARRLVEEAG 191 AG GD V RRL +E G Sbjct 835 AGLGDAQTRELGAVLRRLADERG 857 >gi|312219773|emb|CBX99715.1| similar to fatty acid synthase beta subunit [Leptosphaeria maculans] Length=2109 Score = 35.8 bits (81), Expect = 4.5, Method: Composition-based stats. Identities = 32/130 (25%), Positives = 53/130 (41%), Gaps = 14/130 (10%) Query 36 RPAELFATDNTTDGFELPAVATIALTGTVVTGSTLVDGVFWSNERQQIGYERSR----EF 91 R L D+T G L + +A V+ +LV VF+ Q+ ER + Sbjct 1843 RAKGLVQADSTFAGHSLGEYSALAALAEVMPIESLVSVVFYRGLTMQVAVERDETGRSNY 1902 Query 92 HLCVVDAPTLHNAAEALHRQFNQEAVLTFDYLPQNAPEADAILITVPDIGIARFRDAFAS 151 +C V+ + + FN++A+ Y+ +N E L+ + + IA + A Sbjct 1903 SMCAVN-------PSRISKTFNEQAL---QYVVENIAETTGWLLEIVNYNIANMQYVAAG 1952 Query 152 DLAAHHRLRG 161 DL A L G Sbjct 1953 DLRALDCLTG 1962 >gi|189204113|ref|XP_001938392.1| conserved hypothetical protein [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187985491|gb|EDU50979.1| conserved hypothetical protein [Pyrenophora tritici-repentis Pt-1C-BFP] Length=614 Score = 35.0 bits (79), Expect = 6.2, Method: Compositional matrix adjust. Identities = 34/99 (35%), Positives = 46/99 (47%), Gaps = 13/99 (13%) Query 41 FATDNTTDGFELPAVATIALTGTVVTGST---LVDGVFWSNERQQIGYERSREFHLCVVD 97 FATD TD E A A I+ G +TGS LV V WS R+Q G+ + R + +V Sbjct 123 FATDERTDAHEFRA-ARISPIGAALTGSATFILVWLVHWS--RRQEGFSKGRTLLVLLVF 179 Query 98 APTLHNAAEALHRQFNQEAVLTFDYLPQNAPEADAILIT 136 A A + RQ+ YL Q A + + L+T Sbjct 180 AAMATAAYGYMRRQW-------LYYLRQEAVKGASALVT 211 >gi|326446723|ref|ZP_08221457.1| hypothetical protein SclaA2_36900 [Streptomyces clavuligerus ATCC 27064] Length=155 Score = 35.0 bits (79), Expect = 7.0, Method: Compositional matrix adjust. Identities = 35/117 (30%), Positives = 50/117 (43%), Gaps = 10/117 (8%) Query 4 RKTTSVLAAALLFCGLLGPGTAPPATGGGPACRPAELFA--TDNTTDGFELPAVATIALT 61 R +VL AAL LG TAPPA G P P F D+ DG AVA I+ Sbjct 32 RTRAAVLGAALTAALSLGAVTAPPAAAGNPYFCPQSKFCLWEDSNYDGAMATAVAGISWI 91 Query 62 GTVVT--GSTLVDGVFWSNERQQIGYERSREFH-LCVVDAPTLHNAAEALHRQFNQE 115 G + GS+ +W+ + + R +F C++ + +A L Q N + Sbjct 92 GPYMNDRGSS-----YWNRTGEWVTLYRDIDFQGGCLMGSIAPQESATVLSAQANDQ 143 >gi|227504004|ref|ZP_03934053.1| L-aminopeptidase/D-esterase [Corynebacterium striatum ATCC 6940] gi|227199398|gb|EEI79446.1| L-aminopeptidase/D-esterase [Corynebacterium striatum ATCC 6940] Length=310 Score = 35.0 bits (79), Expect = 7.3, Method: Compositional matrix adjust. Identities = 34/113 (31%), Positives = 43/113 (39%), Gaps = 21/113 (18%) Query 14 LLFCGLLGPGTAPPATGGGPACRPAELFATDNTTDGFELPAVATIALTGTVVTGSTLVDG 73 +L+CG G + GGGP R +L NT + V I L G G DG Sbjct 15 VLYCGSQGAVASIDVRGGGPGTRETDLLEPHNTVE-----RVHAITLAGGSAFGLAAADG 69 Query 74 VFWSNERQQIGYERSRE---------------FHLCVVDA-PTLHNAAEALHR 110 V E Q IG+ E F L + D PT + AEA+ R Sbjct 70 VMRELESQGIGFPVLGEGKPGPRVPIVPGAVIFDLLLGDERPTAEDGAEAVKR 122 >gi|299470765|emb|CBN79811.1| aspartyl/glutamyl-tRNA amidotransferase subunit B [Ectocarpus siliculosus] Length=560 Score = 35.0 bits (79), Expect = 7.6, Method: Compositional matrix adjust. Identities = 23/85 (28%), Positives = 36/85 (43%), Gaps = 0/85 (0%) Query 23 GTAPPATGGGPACRPAELFATDNTTDGFELPAVATIALTGTVVTGSTLVDGVFWSNERQQ 82 G P GG R A+ + GF +PA+ + V +G +L D ER Sbjct 129 GPTKPKAGGAAKARSADELQGGSNDPGFHVPAIGITRIQLEVDSGKSLHDRKGEGAERSL 188 Query 83 IGYERSREFHLCVVDAPTLHNAAEA 107 + R+ + +V P + +AAEA Sbjct 189 VDLNRAGTALMEIVFEPEIRSAAEA 213 >gi|171683419|ref|XP_001906652.1| hypothetical protein [Podospora anserina S mat+] gi|170941669|emb|CAP67323.1| unnamed protein product [Podospora anserina S mat+] Length=2091 Score = 35.0 bits (79), Expect = 7.7, Method: Composition-based stats. Identities = 31/126 (25%), Positives = 53/126 (43%), Gaps = 14/126 (11%) Query 40 LFATDNTTDGFELPAVATIALTGTVVTGSTLVDGVFWSNERQQIGYERSRE----FHLCV 95 L D+T G L + +A V+ +LV VF+ Q+ ER + + +C Sbjct 1828 LVPRDSTFAGHSLGEYSALAALADVMPIESLVSVVFYRGLTMQVAVERDEQGRSNYSMCA 1887 Query 96 VDAPTLHNAAEALHRQFNQEAVLTFDYLPQNAPEADAILITVPDIGIARFRDAFASDLAA 155 V+ + + FN+EA+ ++ N E+ L+ + + IA + A DL A Sbjct 1888 VN-------PSRISKTFNEEAL---RFVVSNIAESTGWLLEIVNFNIANMQYVCAGDLRA 1937 Query 156 HHRLRG 161 L G Sbjct 1938 LDTLAG 1943 Lambda K H 0.320 0.135 0.405 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 239574757050 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40