BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv3407
Length=99
Score E
Sequences producing significant alignments: (Bits) Value
gi|15610543|ref|NP_217924.1| hypothetical protein Rv3407 [Mycoba... 192 2e-47
gi|294995819|ref|ZP_06801510.1| antitoxin [Mycobacterium tubercu... 189 1e-46
gi|308232454|ref|ZP_07416084.2| antitoxin [Mycobacterium tubercu... 177 4e-43
gi|240170729|ref|ZP_04749388.1| hypothetical protein MkanA1_1554... 167 5e-40
gi|120402716|ref|YP_952545.1| prevent-host-death family protein ... 83.2 1e-14
gi|284989379|ref|YP_003407933.1| prevent-host-death family prote... 67.8 5e-10
gi|336176938|ref|YP_004582313.1| prevent-host-death family prote... 60.8 6e-08
gi|284992147|ref|YP_003410701.1| prevent-host-death family prote... 53.9 7e-06
gi|336179975|ref|YP_004585350.1| prevent-host-death family prote... 53.9 8e-06
gi|312198894|ref|YP_004018955.1| prevent-host-death family prote... 53.9 8e-06
gi|296166225|ref|ZP_06848664.1| prevent-host-death family antito... 53.5 1e-05
gi|124515562|gb|EAY57072.1| Prevent-host-death protein [Leptospi... 52.8 2e-05
gi|284029010|ref|YP_003378941.1| prevent-host-death family prote... 52.4 3e-05
gi|284044420|ref|YP_003394760.1| prevent-host-death family prote... 51.6 4e-05
gi|302864893|ref|YP_003833530.1| prevent-host-death family prote... 51.6 4e-05
gi|340532620|gb|AEK47825.1| hypothetical protein RAM_46800 [Amyc... 51.2 4e-05
gi|256372389|ref|YP_003110213.1| prevent-host-death family prote... 50.4 9e-05
gi|343918886|gb|EGV29645.1| prevent-host-death family protein [T... 49.7 1e-04
gi|15841434|ref|NP_336471.1| hypothetical protein MT2013 [Mycoba... 48.9 2e-04
gi|288917439|ref|ZP_06411805.1| prevent-host-death family protei... 48.9 3e-04
gi|108802492|ref|YP_642688.1| prevent-host-death protein [Mycoba... 48.1 4e-04
gi|289570050|ref|ZP_06450277.1| conserved hypothetical protein [... 48.1 4e-04
gi|88812277|ref|ZP_01127528.1| hypothetical protein NB231_02718 ... 47.4 7e-04
gi|300790924|ref|YP_003771215.1| hypothetical protein AMED_9124 ... 47.4 7e-04
gi|15610521|ref|NP_217902.1| hypothetical protein Rv3385c [Mycob... 47.0 0.001
gi|111220043|ref|YP_710837.1| hypothetical protein FRAAL0553 [Fr... 46.6 0.001
gi|326384830|ref|ZP_08206506.1| prevent-host-death family protei... 45.4 0.003
gi|296169351|ref|ZP_06850976.1| prevent-host-death family antito... 45.4 0.003
gi|296165092|ref|ZP_06847644.1| prevent-host-death family antito... 45.4 0.003
gi|297570944|ref|YP_003696718.1| prevent-host-death family prote... 45.1 0.003
gi|145226166|ref|YP_001136820.1| prevent-host-death family prote... 45.1 0.004
gi|83591029|ref|YP_431038.1| prevent-host-death protein [Moorell... 45.1 0.004
gi|284990461|ref|YP_003409015.1| prevent-host-death family prote... 44.7 0.004
gi|258593455|emb|CBE69794.1| conserved protein of unknown functi... 44.3 0.006
gi|333982412|ref|YP_004511622.1| prevent-host-death family prote... 44.3 0.006
gi|37522552|ref|NP_925929.1| hypothetical protein gsl2983 [Gloeo... 44.3 0.007
gi|256375675|ref|YP_003099335.1| prevent-host-death family prote... 43.9 0.008
gi|78224269|ref|YP_386016.1| prevent-host-death protein [Geobact... 43.1 0.013
gi|91206060|ref|YP_538415.1| antitoxin of toxin-antitoxin (TA) s... 43.1 0.015
gi|145595624|ref|YP_001159921.1| prevent-host-death family prote... 42.7 0.017
gi|269978025|ref|ZP_06184975.1| toxin-antitoxin system, antitoxi... 42.7 0.018
gi|340628365|ref|YP_004746817.1| antitoxin [Mycobacterium canett... 42.4 0.020
gi|308232445|ref|ZP_07664086.1| antitoxin [Mycobacterium tubercu... 42.4 0.023
gi|198284676|ref|YP_002220997.1| prevent-host-death family prote... 42.4 0.024
gi|156741046|ref|YP_001431175.1| hypothetical protein Rcas_1056 ... 42.0 0.027
gi|336178691|ref|YP_004584066.1| prevent-host-death family prote... 42.0 0.028
gi|334120797|ref|ZP_08494875.1| prevent-host-death family protei... 42.0 0.029
gi|301064252|ref|ZP_07204695.1| toxin-antitoxin system, antitoxi... 42.0 0.031
gi|339481714|ref|YP_004693500.1| prevent-host-death family prote... 42.0 0.032
gi|169830416|ref|YP_001716398.1| prevent-host-death family prote... 41.6 0.036
>gi|15610543|ref|NP_217924.1| hypothetical protein Rv3407 [Mycobacterium tuberculosis H37Rv]
gi|15843002|ref|NP_338039.1| hypothetical protein MT3515 [Mycobacterium tuberculosis CDC1551]
gi|31794588|ref|NP_857081.1| hypothetical protein Mb3441 [Mycobacterium bovis AF2122/97]
56 more sequence titles
Length=99
Score = 192 bits (487), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 99/99 (100%), Positives = 99/99 (100%), Gaps = 0/99 (0%)
Query 1 MRATVGLVEAIGIRELRQHASRYLARVEAGEELGVTNKGRLVARLIPVQAAERSREALIE 60
MRATVGLVEAIGIRELRQHASRYLARVEAGEELGVTNKGRLVARLIPVQAAERSREALIE
Sbjct 1 MRATVGLVEAIGIRELRQHASRYLARVEAGEELGVTNKGRLVARLIPVQAAERSREALIE 60
Query 61 SGVLIPARRPQNLLDVTAEPARGRKRTLSDVLNEMRDEQ 99
SGVLIPARRPQNLLDVTAEPARGRKRTLSDVLNEMRDEQ
Sbjct 61 SGVLIPARRPQNLLDVTAEPARGRKRTLSDVLNEMRDEQ 99
>gi|294995819|ref|ZP_06801510.1| antitoxin [Mycobacterium tuberculosis 210]
gi|326905251|gb|EGE52184.1| antitoxin [Mycobacterium tuberculosis W-148]
Length=99
Score = 189 bits (480), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 98/99 (99%), Positives = 98/99 (99%), Gaps = 0/99 (0%)
Query 1 MRATVGLVEAIGIRELRQHASRYLARVEAGEELGVTNKGRLVARLIPVQAAERSREALIE 60
MRATVGLVEAIGIRELRQHASRYLARVEAGEELGVTNKGRLVARLIPVQAAERSREALIE
Sbjct 1 MRATVGLVEAIGIRELRQHASRYLARVEAGEELGVTNKGRLVARLIPVQAAERSREALIE 60
Query 61 SGVLIPARRPQNLLDVTAEPARGRKRTLSDVLNEMRDEQ 99
SGVLIPARRPQNLLDVTAEPARG KRTLSDVLNEMRDEQ
Sbjct 61 SGVLIPARRPQNLLDVTAEPARGCKRTLSDVLNEMRDEQ 99
>gi|308232454|ref|ZP_07416084.2| antitoxin [Mycobacterium tuberculosis SUMu001]
gi|308370256|ref|ZP_07420812.2| antitoxin [Mycobacterium tuberculosis SUMu002]
gi|308371338|ref|ZP_07424617.2| antitoxin [Mycobacterium tuberculosis SUMu003]
15 more sequence titles
Length=92
Score = 177 bits (450), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 91/92 (99%), Positives = 92/92 (100%), Gaps = 0/92 (0%)
Query 8 VEAIGIRELRQHASRYLARVEAGEELGVTNKGRLVARLIPVQAAERSREALIESGVLIPA 67
+EAIGIRELRQHASRYLARVEAGEELGVTNKGRLVARLIPVQAAERSREALIESGVLIPA
Sbjct 1 MEAIGIRELRQHASRYLARVEAGEELGVTNKGRLVARLIPVQAAERSREALIESGVLIPA 60
Query 68 RRPQNLLDVTAEPARGRKRTLSDVLNEMRDEQ 99
RRPQNLLDVTAEPARGRKRTLSDVLNEMRDEQ
Sbjct 61 RRPQNLLDVTAEPARGRKRTLSDVLNEMRDEQ 92
>gi|240170729|ref|ZP_04749388.1| hypothetical protein MkanA1_15547 [Mycobacterium kansasii ATCC
12478]
Length=99
Score = 167 bits (423), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 85/99 (86%), Positives = 90/99 (91%), Gaps = 0/99 (0%)
Query 1 MRATVGLVEAIGIRELRQHASRYLARVEAGEELGVTNKGRLVARLIPVQAAERSREALIE 60
M AT+G VEAIG+RELRQHASRYLARVEAGEELG+TN GRLVARL+PVQAAERSREALIE
Sbjct 1 MSATMGAVEAIGVRELRQHASRYLARVEAGEELGITNNGRLVARLVPVQAAERSREALIE 60
Query 61 SGVLIPARRPQNLLDVTAEPARGRKRTLSDVLNEMRDEQ 99
SG LIPA PQNLLDVTA PA RKRTLSDVL+EMRDEQ
Sbjct 61 SGTLIPAPCPQNLLDVTATPAPDRKRTLSDVLDEMRDEQ 99
>gi|120402716|ref|YP_952545.1| prevent-host-death family protein [Mycobacterium vanbaalenii
PYR-1]
gi|119955534|gb|ABM12539.1| prevent-host-death family protein [Mycobacterium vanbaalenii
PYR-1]
Length=95
Score = 83.2 bits (204), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/93 (51%), Positives = 63/93 (68%), Gaps = 11/93 (11%)
Query 8 VEAIGIRELRQHASRYLARVEAGEELGVTNKGRLVARLIPVQAAERSREALIESGVLIPA 67
VE IG+RELRQHAS ++A+ +AGE + +T++GRLVARL PV A +REALI+SG L+PA
Sbjct 7 VERIGVRELRQHASTWVAKAQAGETIEITSRGRLVARLTPVADALVTREALIDSGQLVPA 66
Query 68 RRPQNLLD----VTAEPARGRKRTLSDVLNEMR 96
P+ + D V A P LS +L+E R
Sbjct 67 ASPRRMFDRARLVDAAP-------LSAILDEQR 92
>gi|284989379|ref|YP_003407933.1| prevent-host-death family protein [Geodermatophilus obscurus
DSM 43160]
gi|284062624|gb|ADB73562.1| prevent-host-death family protein [Geodermatophilus obscurus
DSM 43160]
Length=91
Score = 67.8 bits (164), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 42/89 (48%), Positives = 55/89 (62%), Gaps = 2/89 (2%)
Query 11 IGIRELRQHASRYLARVEAGEELGVTNKGRLVARLIPVQAAERSREALIESGVLIPARRP 70
IG+RELRQ+ASRYLA V+AGE + VT +G L+A L P A +RE LI G L+PA P
Sbjct 4 IGVRELRQNASRYLALVKAGETVEVTERGELIAVLSPPSPAATTRERLIAEGRLVPASAP 63
Query 71 QNLLDVTAEPARGRKRTLSDVLNEMRDEQ 99
+ D PA + S+ L+E R E+
Sbjct 64 FRIPDRVPPPAGA--LSASEALDEQRAER 90
>gi|336176938|ref|YP_004582313.1| prevent-host-death family protein [Frankia symbiont of Datisca
glomerata]
gi|334857918|gb|AEH08392.1| prevent-host-death family protein [Frankia symbiont of Datisca
glomerata]
Length=96
Score = 60.8 bits (146), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/93 (41%), Positives = 54/93 (59%), Gaps = 2/93 (2%)
Query 7 LVEAIGIRELRQHASRYLARVEAGEELGVTNKGRLVARLIPVQAAERSREALIESGVLIP 66
++E IG+REL+ +ASR L RV+ GE + +T +GRL+A L P ++R LI+ GVL P
Sbjct 4 MMERIGVRELQHNASRILDRVKTGETIEITERGRLIAVLTPPSDLHQARARLIDEGVLQP 63
Query 67 ARRPQNLLDVTAEPARGRKRTLSDVLNEMRDEQ 99
L + P R LS+VL +MR E
Sbjct 64 GE--GGLAEWEPGPPRTDGPALSEVLLDMRAED 94
>gi|284992147|ref|YP_003410701.1| prevent-host-death family protein [Geodermatophilus obscurus
DSM 43160]
gi|284065392|gb|ADB76330.1| prevent-host-death family protein [Geodermatophilus obscurus
DSM 43160]
Length=85
Score = 53.9 bits (128), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/62 (49%), Positives = 43/62 (70%), Gaps = 1/62 (1%)
Query 8 VEAIGIRELRQHASRYLARVEAGEELGVTNKGRLVARLIPVQAAERSREALIESGVLIPA 67
++++GIRELR SRYLA+V AG + VT+ GR VAR++PV + E LI G++ PA
Sbjct 1 MDSVGIRELRDGLSRYLAQVRAGRTVTVTDHGRPVARIVPVDESS-PLERLIAEGLVQPA 59
Query 68 RR 69
R+
Sbjct 60 RQ 61
>gi|336179975|ref|YP_004585350.1| prevent-host-death family protein [Frankia symbiont of Datisca
glomerata]
gi|334860955|gb|AEH11429.1| prevent-host-death family protein [Frankia symbiont of Datisca
glomerata]
Length=98
Score = 53.9 bits (128), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/88 (39%), Positives = 53/88 (61%), Gaps = 2/88 (2%)
Query 11 IGIRELRQHASRYLARVEAGEELGVTNKGRLVARLIPVQAAERSREALIESGVLIPARRP 70
+G+REL Q +R LA V AGE + VT++GR VAR++P AA+ E L+ +G++ A RP
Sbjct 12 VGMRELSQRTARVLALVRAGETVEVTDRGRTVARIVP--AADDRYEQLVAAGLIRRAARP 69
Query 71 QNLLDVTAEPARGRKRTLSDVLNEMRDE 98
+L + A R+ + L ++R E
Sbjct 70 FSLAHLPEPAANPTGRSSDEWLTDLRGE 97
>gi|312198894|ref|YP_004018955.1| prevent-host-death family protein [Frankia sp. EuI1c]
gi|311230230|gb|ADP83085.1| prevent-host-death family protein [Frankia sp. EuI1c]
Length=84
Score = 53.9 bits (128), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 38/96 (40%), Positives = 51/96 (54%), Gaps = 25/96 (26%)
Query 11 IGIRELRQHASRYLARVEAGEELGVTNKGRLVARLIPVQAAERSREALIESGVLIPARRP 70
+GIR+LR + SR+LA V AG L +T+ GR +ARL+PV R E LI GV+
Sbjct 3 VGIRDLRDNLSRHLAEVRAGRTLTITDHGRAIARLVPVAKPTRL-EQLIAEGVV------ 55
Query 71 QNLLDVTAEPARGRKRT----------LSDVLNEMR 96
EPAR R RT +SD+++E R
Sbjct 56 --------EPARSRTRTSPRPVEADGIVSDLVSEQR 83
>gi|296166225|ref|ZP_06848664.1| prevent-host-death family antitoxin [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295898409|gb|EFG77976.1| prevent-host-death family antitoxin [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length=89
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/61 (46%), Positives = 42/61 (69%), Gaps = 3/61 (4%)
Query 8 VEAIGIRELRQHASRYLARVEA-GEELGVTNKGRLVARLIPVQAAERSREALIESGVLIP 66
+E IG+RELRQHASRYLA+V A G+ + +T GR +ARL+P+ + ++ +G + P
Sbjct 1 MERIGVRELRQHASRYLAKVTASGDFIEITEHGRPIARLVPIT--DDPWADMVAAGEITP 58
Query 67 A 67
A
Sbjct 59 A 59
>gi|124515562|gb|EAY57072.1| Prevent-host-death protein [Leptospirillum rubarum]
gi|206601807|gb|EDZ38290.1| Prevent-host-death protein [Leptospirillum sp. Group II '5-way
CG']
Length=81
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/52 (47%), Positives = 39/52 (75%), Gaps = 1/52 (1%)
Query 8 VEAIGIRELRQHASRYLARVEAGEELGVTNKGRLVARLIPVQ-AAERSREAL 58
+E I + ELRQH YL RV +GEE+G+T+ G+++ARL+P + +E++R+ L
Sbjct 1 METINVTELRQHLPAYLKRVASGEEIGITSHGKIIARLLPEEDPSEKARKWL 52
>gi|284029010|ref|YP_003378941.1| prevent-host-death family protein [Kribbella flavida DSM 17836]
gi|283808303|gb|ADB30142.1| prevent-host-death family protein [Kribbella flavida DSM 17836]
Length=93
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/93 (38%), Positives = 54/93 (59%), Gaps = 8/93 (8%)
Query 10 AIGIRELRQHASRYLARVEAGEELGVTNKGRLVARLIPVQAAERSREALIESGVLIPARR 69
IG+REL Q+ S+ +ARV AGE + VT++GR V RL+P Q + + +I+SG + P
Sbjct 3 TIGLRELNQNPSKAVARVRAGETIVVTDRGRPVLRLVPEQEQPATLQHMIDSGEVAPPAE 62
Query 70 ---PQNLLDVTAEPARGRKRTLSDVLNEMRDEQ 99
P L++ E +LSD+L RD++
Sbjct 63 FGMPDLALELAPE-----VESLSDLLISDRDKE 90
>gi|284044420|ref|YP_003394760.1| prevent-host-death family protein [Conexibacter woesei DSM 14684]
gi|283948641|gb|ADB51385.1| prevent-host-death family protein [Conexibacter woesei DSM 14684]
Length=91
Score = 51.6 bits (122), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/90 (47%), Positives = 50/90 (56%), Gaps = 2/90 (2%)
Query 10 AIGIRELRQHASRYLARVEAGEELGVTNKGRLVARLIPVQAAERSREALIESGVLIPARR 69
+IGIRELRQ ASRYL VE GE VT++GR VA L PV A + E L SG L A
Sbjct 3 SIGIRELRQQASRYLREVERGETFEVTDRGRPVALLAPVPQAS-TVERLAASGRLRRASG 61
Query 70 PQNLLDVTAEPARGRKRTLSDVLNEMRDEQ 99
L PA G T S+ L +RD++
Sbjct 62 DVLALGEPLAPAAGIS-TPSETLERLRDDE 90
>gi|302864893|ref|YP_003833530.1| prevent-host-death family protein [Micromonospora aurantiaca
ATCC 27029]
gi|315501179|ref|YP_004080066.1| prevent-host-death family protein [Micromonospora sp. L5]
gi|302567752|gb|ADL43954.1| prevent-host-death family protein [Micromonospora aurantiaca
ATCC 27029]
gi|315407798|gb|ADU05915.1| prevent-host-death family protein [Micromonospora sp. L5]
Length=92
Score = 51.6 bits (122), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/45 (56%), Positives = 33/45 (74%), Gaps = 0/45 (0%)
Query 8 VEAIGIRELRQHASRYLARVEAGEELGVTNKGRLVARLIPVQAAE 52
+E I +REL QH SR LARV AGE + VT++G +ARL+PV A +
Sbjct 1 MEQIAVRELNQHTSRVLARVRAGETVEVTDRGEPIARLVPVLAGD 45
>gi|340532620|gb|AEK47825.1| hypothetical protein RAM_46800 [Amycolatopsis mediterranei S699]
Length=90
Score = 51.2 bits (121), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/57 (48%), Positives = 40/57 (71%), Gaps = 2/57 (3%)
Query 11 IGIRELRQHASRYLARVEAGEELGVTNKGRLVARLIPVQAAERSREALIESGVLIPA 67
+G+REL Q + LARV+AGE++ +T +G ++AR++P Q + S ALI SG L PA
Sbjct 4 VGVRELNQDTAGVLARVKAGEDVEITERGTVIARIVPAQPSPVS--ALIASGKLHPA 58
>gi|256372389|ref|YP_003110213.1| prevent-host-death family protein [Acidimicrobium ferrooxidans
DSM 10331]
gi|256008973|gb|ACU54540.1| prevent-host-death family protein [Acidimicrobium ferrooxidans
DSM 10331]
Length=91
Score = 50.4 bits (119), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 35/87 (41%), Positives = 54/87 (63%), Gaps = 5/87 (5%)
Query 11 IGIRELRQHASRYLARVEAGEELGVTNKGRLVARLIPVQAAERSREALIESGVLIPARRP 70
+GIR L+Q+AS+ +AR AGE + +T++GR VA+L+PV E A + SG PA+
Sbjct 4 VGIRALKQNASQVVARAAAGEVVTITDRGRPVAQLVPVP--EGRVAAFVASGRARPAK-- 59
Query 71 QNLLDVTAEPARGRKRT-LSDVLNEMR 96
+L + A P G ++ LS+V+ MR
Sbjct 60 GSLAALGAPPDAGAEQPRLSEVVAAMR 86
>gi|343918886|gb|EGV29645.1| prevent-host-death family protein [Thiorhodococcus drewsii AZ1]
Length=83
Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/51 (48%), Positives = 35/51 (69%), Gaps = 0/51 (0%)
Query 7 LVEAIGIRELRQHASRYLARVEAGEELGVTNKGRLVARLIPVQAAERSREA 57
+ E + IR+ QH SRYL RVE G E+ +T +G+ +ARL+P++ A R EA
Sbjct 1 MQEIVSIRDANQHLSRYLERVEQGAEVIITRRGKPIARLMPIEPASRLSEA 51
>gi|15841434|ref|NP_336471.1| hypothetical protein MT2013 [Mycobacterium tuberculosis CDC1551]
gi|121637868|ref|YP_978091.1| antitoxin [Mycobacterium bovis BCG str. Pasteur 1173P2]
gi|148661770|ref|YP_001283293.1| hypothetical protein MRA_1972 [Mycobacterium tuberculosis H37Ra]
64 more sequence titles
Length=90
Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/58 (44%), Positives = 39/58 (68%), Gaps = 2/58 (3%)
Query 11 IGIRELRQHASRYLARVEAGEELGVTNKGRLVARLIPVQAAERSREALIESGVLIPAR 68
+ IR L Q S+ LARV+ GEE+ +T +G+++AR+IP A ++LI +G + PAR
Sbjct 4 VSIRTLNQETSKVLARVKRGEEINLTERGKVIARIIPASAG--PLDSLISTGSVQPAR 59
>gi|288917439|ref|ZP_06411805.1| prevent-host-death family protein [Frankia sp. EUN1f]
gi|288351142|gb|EFC85353.1| prevent-host-death family protein [Frankia sp. EUN1f]
Length=98
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/93 (36%), Positives = 51/93 (55%), Gaps = 4/93 (4%)
Query 8 VEAIGIRELRQHASRYLARVEAGEELGVTNKGRLVARLIPVQAAERSREALIESGVLIPA 67
++ +G+REL Q+ S+ + RV GE + VT++GR VARL+P+ + + L+ G IP
Sbjct 7 MDRVGVRELNQNTSQVIDRVRHGETIEVTDRGRPVARLVPIGRGTAALDRLVAEGRAIP- 65
Query 68 RRPQNLLDVTAEPARGRKR-TLSDVLNEMRDEQ 99
P V P G + +D L MRDE+
Sbjct 66 --PVTGGPVPMPPLLGSPSVSATDELIAMRDEE 96
>gi|108802492|ref|YP_642688.1| prevent-host-death protein [Mycobacterium sp. MCS]
gi|119855320|ref|YP_935923.1| prevent-host-death family protein [Mycobacterium sp. KMS]
gi|108772911|gb|ABG11632.1| Prevent-host-death protein [Mycobacterium sp. MCS]
gi|119698037|gb|ABL95108.1| prevent-host-death family protein [Mycobacterium sp. KMS]
Length=86
Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 48/85 (57%), Gaps = 6/85 (7%)
Query 12 GIRELRQHASRYLARVEAGEELGVTNKGRLVARLIPVQAAERSREALIESGVLIPARRPQ 71
G+RELRQ+AS L +V AGE + +T+ G+ VA+LIP A ALI S + PAR
Sbjct 8 GVRELRQNASVLLRQVAAGETIEITSNGQPVAQLIP--ATYDPWTALIASKEVTPAR--T 63
Query 72 NLLDVTAEPARGRKRTLSDVLNEMR 96
+ D+ P R T +D+ + R
Sbjct 64 GVTDILDNPP--RPYTPTDIPRDPR 86
>gi|289570050|ref|ZP_06450277.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
gi|289750545|ref|ZP_06509923.1| conserved hypothetical protein [Mycobacterium tuberculosis T92]
gi|289543804|gb|EFD47452.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
gi|289691132|gb|EFD58561.1| conserved hypothetical protein [Mycobacterium tuberculosis T92]
Length=87
Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/58 (44%), Positives = 39/58 (68%), Gaps = 2/58 (3%)
Query 11 IGIRELRQHASRYLARVEAGEELGVTNKGRLVARLIPVQAAERSREALIESGVLIPAR 68
+ IR L Q S+ LARV+ GEE+ +T +G+++AR+IP A ++LI +G + PAR
Sbjct 1 MSIRTLNQETSKVLARVKRGEEINLTERGKVIARIIPASAG--PLDSLISTGSVQPAR 56
>gi|88812277|ref|ZP_01127528.1| hypothetical protein NB231_02718 [Nitrococcus mobilis Nb-231]
gi|88790528|gb|EAR21644.1| hypothetical protein NB231_02718 [Nitrococcus mobilis Nb-231]
Length=93
Score = 47.4 bits (111), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/92 (39%), Positives = 51/92 (56%), Gaps = 5/92 (5%)
Query 11 IGIRELRQHASRYLARVEAGEELGVTNKGRLVARLIPVQAAERSR--EALIESGVLIPAR 68
+ +REL+ S YL R +AGEE+ + ++GR VARL+P + A R EAL + +P
Sbjct 3 VSVRELKNRLSEYLRRTQAGEEITIASRGRPVARLLPPRPATRPTDDEALARL-MALPGI 61
Query 69 RPQNLLDVTA--EPARGRKRTLSDVLNEMRDE 98
RP N V +PA T +V+N +R E
Sbjct 62 RPGNGQKVRGADQPASVPAGTTEEVVNWVRGE 93
>gi|300790924|ref|YP_003771215.1| hypothetical protein AMED_9124 [Amycolatopsis mediterranei U32]
gi|299800438|gb|ADJ50813.1| conserved hypothetical protein [Amycolatopsis mediterranei U32]
Length=85
Score = 47.4 bits (111), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/55 (48%), Positives = 38/55 (70%), Gaps = 2/55 (3%)
Query 13 IRELRQHASRYLARVEAGEELGVTNKGRLVARLIPVQAAERSREALIESGVLIPA 67
+REL Q + LARV+AGE++ +T +G ++AR++P Q + S ALI SG L PA
Sbjct 1 MRELNQDTAGVLARVKAGEDVEITERGTVIARIVPAQPSPVS--ALIASGKLHPA 53
>gi|15610521|ref|NP_217902.1| hypothetical protein Rv3385c [Mycobacterium tuberculosis H37Rv]
gi|15842978|ref|NP_338015.1| hypothetical protein MT3493 [Mycobacterium tuberculosis CDC1551]
gi|31794565|ref|NP_857058.1| hypothetical protein Mb3417c [Mycobacterium bovis AF2122/97]
50 more sequence titles
Length=102
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/46 (53%), Positives = 33/46 (72%), Gaps = 0/46 (0%)
Query 3 ATVGLVEAIGIRELRQHASRYLARVEAGEELGVTNKGRLVARLIPV 48
ATV + ++G+R LRQ AS L RVEAGE + +T++GR VA L P+
Sbjct 7 ATVSTMTSVGVRALRQRASELLRRVEAGETIEITDRGRPVALLSPL 52
>gi|111220043|ref|YP_710837.1| hypothetical protein FRAAL0553 [Frankia alni ACN14a]
gi|111147575|emb|CAJ59228.1| conserved hypothetical protein [Frankia alni ACN14a]
Length=87
Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/88 (35%), Positives = 50/88 (57%), Gaps = 2/88 (2%)
Query 11 IGIRELRQHASRYLARVEAGEELGVTNKGRLVARLIPVQAAERSREALIESGVLIPARRP 70
+G+REL Q ++ LA V AG + VT++GR+VAR++P A + E L+ +G++ A P
Sbjct 1 MGMRELSQRTAKVLALVRAGATVEVTDRGRIVARIVP--AEDDRYEQLVAAGLIRQATGP 58
Query 71 QNLLDVTAEPARGRKRTLSDVLNEMRDE 98
N + A R+ + L ++R E
Sbjct 59 FNPAHLPEPAANPTGRSTDEWLADLRGE 86
>gi|326384830|ref|ZP_08206506.1| prevent-host-death family protein [Gordonia neofelifaecis NRRL
B-59395]
gi|326196492|gb|EGD53690.1| prevent-host-death family protein [Gordonia neofelifaecis NRRL
B-59395]
Length=83
Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 42/75 (56%), Gaps = 5/75 (6%)
Query 11 IGIRELRQHASRYLARVEAGEELGVTNKGRLVARLI---PVQAAERSREALIESGVLIPA 67
+G+RELRQ AS + RVE G+E+ +T GR VARL+ P E S A + +G PA
Sbjct 4 VGLRELRQDASNLVRRVEGGDEVTITVSGRPVARLVSAAPKAWREWSAVADLFNGTADPA 63
Query 68 RRP--QNLLDVTAEP 80
Q + D+ +P
Sbjct 64 WEADRQEIDDLATDP 78
>gi|296169351|ref|ZP_06850976.1| prevent-host-death family antitoxin [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295895973|gb|EFG75663.1| prevent-host-death family antitoxin [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length=91
Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/56 (42%), Positives = 35/56 (63%), Gaps = 0/56 (0%)
Query 8 VEAIGIRELRQHASRYLARVEAGEELGVTNKGRLVARLIPVQAAERSREALIESGV 63
+ +G+RELRQ AS L RVEAGE + +T++GR +A L P+ ++ L G+
Sbjct 1 MSTVGVRELRQRASELLRRVEAGETIEITDRGRPIALLSPMPEGGPYQQMLASGGI 56
>gi|296165092|ref|ZP_06847644.1| prevent-host-death family antitoxin [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295899551|gb|EFG79005.1| prevent-host-death family antitoxin [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length=165
Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/40 (53%), Positives = 30/40 (75%), Gaps = 0/40 (0%)
Query 9 EAIGIRELRQHASRYLARVEAGEELGVTNKGRLVARLIPV 48
+AIG+ +LR +A YL RV AGE + V +G+LVAR++PV
Sbjct 11 KAIGLGQLRSNACTYLERVAAGESIDVVRRGKLVARIVPV 50
Score = 40.4 bits (93), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 20/44 (46%), Positives = 28/44 (64%), Gaps = 0/44 (0%)
Query 11 IGIRELRQHASRYLARVEAGEELGVTNKGRLVARLIPVQAAERS 54
+G+ ELR A R RV AGE + V GRL+A+++P AER+
Sbjct 74 VGLDELRTRAGRCFDRVAAGETVSVVRGGRLLAQIVPAGEAERA 117
>gi|297570944|ref|YP_003696718.1| prevent-host-death family protein [Arcanobacterium haemolyticum
DSM 20595]
gi|296931291|gb|ADH92099.1| prevent-host-death family protein [Arcanobacterium haemolyticum
DSM 20595]
Length=103
Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 53/90 (59%), Gaps = 2/90 (2%)
Query 11 IGIRELRQHASRYLARV-EAGEELGVTNKGRLVARLIPVQAAERSREALIESGVLIPARR 69
+ +REL Q + R +ARV ++ +E+ VT++G+ +A ++P+QA LI G +PA +
Sbjct 12 VSLRELNQQSGRVMARVRDSQQEVIVTDRGKPIATIVPIQAEVSPLARLIAEGNALPASQ 71
Query 70 PQNLLDVTAEPARGR-KRTLSDVLNEMRDE 98
+ +D+ + + +L DV+ + RD+
Sbjct 72 SISSIDIDSLVITTQSNHSLDDVIQKDRDD 101
>gi|145226166|ref|YP_001136820.1| prevent-host-death family protein [Mycobacterium gilvum PYR-GCK]
gi|145218629|gb|ABP48032.1| prevent-host-death family protein [Mycobacterium gilvum PYR-GCK]
Length=82
Score = 45.1 bits (105), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/40 (55%), Positives = 30/40 (75%), Gaps = 0/40 (0%)
Query 8 VEAIGIRELRQHASRYLARVEAGEELGVTNKGRLVARLIP 47
+E +G+RELRQ+AS + RVE GEE+ +T GR ARL+P
Sbjct 1 METVGLRELRQNASDLIRRVEEGEEITITVAGRPGARLVP 40
>gi|83591029|ref|YP_431038.1| prevent-host-death protein [Moorella thermoacetica ATCC 39073]
gi|83573943|gb|ABC20495.1| Prevent-host-death protein [Moorella thermoacetica ATCC 39073]
Length=89
Score = 45.1 bits (105), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/42 (48%), Positives = 32/42 (77%), Gaps = 0/42 (0%)
Query 8 VEAIGIRELRQHASRYLARVEAGEELGVTNKGRLVARLIPVQ 49
+E IGIR+++ S+Y+ RV+ GE L +T +GR VARL+P++
Sbjct 1 MEQIGIRKMKASMSQYIKRVKEGETLIITVRGRPVARLVPIE 42
>gi|284990461|ref|YP_003409015.1| prevent-host-death family protein [Geodermatophilus obscurus
DSM 43160]
gi|284063706|gb|ADB74644.1| prevent-host-death family protein [Geodermatophilus obscurus
DSM 43160]
Length=78
Score = 44.7 bits (104), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/40 (48%), Positives = 30/40 (75%), Gaps = 0/40 (0%)
Query 7 LVEAIGIRELRQHASRYLARVEAGEELGVTNKGRLVARLI 46
+ ++G+ E + H SR L RV AGEE+ +TN+G++VARL+
Sbjct 1 MTTSVGVHEAKTHLSRLLERVAAGEEVEITNRGKVVARLV 40
>gi|258593455|emb|CBE69794.1| conserved protein of unknown function [NC10 bacterium 'Dutch
sediment']
Length=95
Score = 44.3 bits (103), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/88 (37%), Positives = 52/88 (60%), Gaps = 3/88 (3%)
Query 11 IGIRELRQHASRYLARVEAGEELGVTNKGRLVARLIP-VQAAERSREALIESGVLIPARR 69
+ IREL+ S YL V+AGE + + ++G + R++P + E EAL +SG+++ +R
Sbjct 10 VSIRELKSRLSHYLRLVKAGESVEIADRGTPIGRIVPTILPIEDRIEALAQSGLVLWNKR 69
Query 70 PQNLLDVTAEPARGRKRTLSDVLNEMRD 97
L A RG KRT++D+L E R+
Sbjct 70 KLTSLAPVAR-VRG-KRTVADLLIEDRE 95
>gi|333982412|ref|YP_004511622.1| prevent-host-death family protein [Methylomonas methanica MC09]
gi|333806453|gb|AEF99122.1| prevent-host-death family protein [Methylomonas methanica MC09]
Length=81
Score = 44.3 bits (103), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/55 (39%), Positives = 33/55 (60%), Gaps = 0/55 (0%)
Query 10 AIGIRELRQHASRYLARVEAGEELGVTNKGRLVARLIPVQAAERSREALIESGVL 64
++ + ELRQH YL +V+ GEE+ +T G+ +AR++P Q + AL G L
Sbjct 3 SVNVTELRQHLPDYLKQVQDGEEVAITLHGKTIARIVPDQQENKREIALKRLGAL 57
>gi|37522552|ref|NP_925929.1| hypothetical protein gsl2983 [Gloeobacter violaceus PCC 7421]
gi|35213553|dbj|BAC90924.1| gsl2983 [Gloeobacter violaceus PCC 7421]
Length=85
Score = 44.3 bits (103), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/66 (46%), Positives = 36/66 (55%), Gaps = 16/66 (24%)
Query 11 IGIRELRQHASRYLARVEAGEELGVTNKGRLVARLIPV---------QAAER----SREA 57
IG+RE R S YLA GE LGV N GRLV IP+ QAAER R+A
Sbjct 7 IGVREFRDRVSHYLA---CGEVLGVQNHGRLVGVFIPLRAPDNDKVEQAAERLAAVMRQA 63
Query 58 LIESGV 63
+ E+G+
Sbjct 64 VKETGM 69
>gi|256375675|ref|YP_003099335.1| prevent-host-death family protein [Actinosynnema mirum DSM 43827]
gi|255919978|gb|ACU35489.1| prevent-host-death family protein [Actinosynnema mirum DSM 43827]
Length=94
Score = 43.9 bits (102), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/53 (50%), Positives = 30/53 (57%), Gaps = 0/53 (0%)
Query 8 VEAIGIRELRQHASRYLARVEAGEELGVTNKGRLVARLIPVQAAERSREALIE 60
V +IG RELR + + RVEAGE VT GR VA L+P A R R L E
Sbjct 3 VASIGQRELRNDNAEIMRRVEAGESFVVTRNGRPVADLVPHAAEPRPRATLAE 55
>gi|78224269|ref|YP_386016.1| prevent-host-death protein [Geobacter metallireducens GS-15]
gi|78195524|gb|ABB33291.1| Prevent-host-death protein [Geobacter metallireducens GS-15]
Length=86
Score = 43.1 bits (100), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 20/53 (38%), Positives = 35/53 (67%), Gaps = 0/53 (0%)
Query 10 AIGIRELRQHASRYLARVEAGEELGVTNKGRLVARLIPVQAAERSREALIESG 62
A+GI+EL+ S Y+ +V+ GEE+ +T+ GR VA ++P+ R+ + L+ G
Sbjct 3 AVGIKELKARLSSYVEKVQQGEEVVITDHGREVALVVPISPERRAVKTLMTEG 55
>gi|91206060|ref|YP_538415.1| antitoxin of toxin-antitoxin (TA) system Phd [Rickettsia bellii
RML369-C]
gi|157826558|ref|YP_001495622.1| antitoxin of toxin-antitoxin (TA) system Phd [Rickettsia bellii
OSU 85-389]
gi|91069604|gb|ABE05326.1| Antitoxin of toxin-antitoxin (TA) system Phd [Rickettsia bellii
RML369-C]
gi|157801862|gb|ABV78585.1| Antitoxin of toxin-antitoxin (TA) system Phd [Rickettsia bellii
OSU 85-389]
Length=80
Score = 43.1 bits (100), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 20/52 (39%), Positives = 32/52 (62%), Gaps = 0/52 (0%)
Query 8 VEAIGIRELRQHASRYLARVEAGEELGVTNKGRLVARLIPVQAAERSREALI 59
++ IG+ + + H + VEAGEEL +TN+GR VA +IP+ + + A I
Sbjct 1 MKTIGMFKTKTHLPELIKDVEAGEELCITNRGRKVAVIIPIDKYYKKKYANI 52
>gi|145595624|ref|YP_001159921.1| prevent-host-death family protein [Salinispora tropica CNB-440]
gi|145304961|gb|ABP55543.1| prevent-host-death family protein [Salinispora tropica CNB-440]
Length=95
Score = 42.7 bits (99), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 22/46 (48%), Positives = 32/46 (70%), Gaps = 0/46 (0%)
Query 3 ATVGLVEAIGIRELRQHASRYLARVEAGEELGVTNKGRLVARLIPV 48
ATVG ++ +G+RE+RQ+AS + R +AGE + +T GR A L PV
Sbjct 9 ATVGHMDEVGLREMRQNASDLVRRAQAGERVTITVAGRPAAVLGPV 54
>gi|269978025|ref|ZP_06184975.1| toxin-antitoxin system, antitoxin component, PHD family [Mobiluncus
mulieris 28-1]
gi|307700770|ref|ZP_07637795.1| toxin-antitoxin system, antitoxin component, PHD family [Mobiluncus
mulieris FB024-16]
gi|269933534|gb|EEZ90118.1| toxin-antitoxin system, antitoxin component, PHD family [Mobiluncus
mulieris 28-1]
gi|307613765|gb|EFN93009.1| toxin-antitoxin system, antitoxin component, PHD family [Mobiluncus
mulieris FB024-16]
Length=87
Score = 42.7 bits (99), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 23/39 (59%), Positives = 28/39 (72%), Gaps = 0/39 (0%)
Query 11 IGIRELRQHASRYLARVEAGEELGVTNKGRLVARLIPVQ 49
+G+REL Q+AS L RV AGE L VTN+ R VA L+P Q
Sbjct 1 MGLRELGQNASEVLRRVAAGEVLTVTNRRRPVAWLVPWQ 39
>gi|340628365|ref|YP_004746817.1| antitoxin [Mycobacterium canettii CIPT 140010059]
gi|340006555|emb|CCC45741.1| antitoxin [Mycobacterium canettii CIPT 140010059]
Length=92
Score = 42.4 bits (98), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 30/42 (72%), Gaps = 0/42 (0%)
Query 7 LVEAIGIRELRQHASRYLARVEAGEELGVTNKGRLVARLIPV 48
+ ++G+R LRQ AS L RVEAGE + +T++GR VA L P+
Sbjct 1 MASSVGVRALRQRASELLRRVEAGETIEITDRGRPVALLSPM 42
>gi|308232445|ref|ZP_07664086.1| antitoxin [Mycobacterium tuberculosis SUMu001]
gi|308370248|ref|ZP_07666900.1| antitoxin [Mycobacterium tuberculosis SUMu002]
gi|308371328|ref|ZP_07667137.1| antitoxin [Mycobacterium tuberculosis SUMu003]
22 more sequence titles
Length=91
Score = 42.4 bits (98), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 21/39 (54%), Positives = 29/39 (75%), Gaps = 0/39 (0%)
Query 10 AIGIRELRQHASRYLARVEAGEELGVTNKGRLVARLIPV 48
++G+R LRQ AS L RVEAGE + +T++GR VA L P+
Sbjct 3 SVGVRALRQRASELLRRVEAGETIEITDRGRPVALLSPL 41
>gi|198284676|ref|YP_002220997.1| prevent-host-death family protein [Acidithiobacillus ferrooxidans
ATCC 53993]
gi|218666488|ref|YP_002427350.1| prevent-host-death family protein [Acidithiobacillus ferrooxidans
ATCC 23270]
gi|198249197|gb|ACH84790.1| prevent-host-death family protein [Acidithiobacillus ferrooxidans
ATCC 53993]
gi|218518701|gb|ACK79287.1| prevent-host-death family protein [Acidithiobacillus ferrooxidans
ATCC 23270]
gi|339833274|gb|EGQ61131.1| prevent-host-death family protein [Acidithiobacillus sp. GGI-221]
Length=80
Score = 42.4 bits (98), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 29/40 (73%), Gaps = 0/40 (0%)
Query 10 AIGIRELRQHASRYLARVEAGEELGVTNKGRLVARLIPVQ 49
+I + E + H S L RVEAGEEL +T +G+ VAR++PV+
Sbjct 6 SIALAEAKAHLSHVLDRVEAGEELVITRRGKPVARVVPVR 45
>gi|156741046|ref|YP_001431175.1| hypothetical protein Rcas_1056 [Roseiflexus castenholzii DSM
13941]
gi|156232374|gb|ABU57157.1| hypothetical protein Rcas_1056 [Roseiflexus castenholzii DSM
13941]
Length=105
Score = 42.0 bits (97), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 32/42 (77%), Gaps = 1/42 (2%)
Query 6 GLVEAIGIRELRQHASRYLARVEAGEELGVTNKGRLVARLIP 47
G++E + I+ELR+ + Y+ARVEAGEE+ V + + VARL+P
Sbjct 27 GMLE-VNIKELRKQLAEYIARVEAGEEIIVIRQEKAVARLMP 67
>gi|336178691|ref|YP_004584066.1| prevent-host-death family protein [Frankia symbiont of Datisca
glomerata]
gi|334859671|gb|AEH10145.1| prevent-host-death family protein [Frankia symbiont of Datisca
glomerata]
Length=94
Score = 42.0 bits (97), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 19/39 (49%), Positives = 29/39 (75%), Gaps = 0/39 (0%)
Query 11 IGIRELRQHASRYLARVEAGEELGVTNKGRLVARLIPVQ 49
+G+REL Q+ S+ + RV GE + VT++G VARL+PV+
Sbjct 4 VGVRELNQNTSQVIERVRRGETVEVTDRGHPVARLVPVE 42
>gi|334120797|ref|ZP_08494875.1| prevent-host-death family protein [Microcoleus vaginatus FGP-2]
gi|333456069|gb|EGK84707.1| prevent-host-death family protein [Microcoleus vaginatus FGP-2]
Length=81
Score = 42.0 bits (97), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 19/51 (38%), Positives = 34/51 (67%), Gaps = 0/51 (0%)
Query 8 VEAIGIRELRQHASRYLARVEAGEELGVTNKGRLVARLIPVQAAERSREAL 58
+E + I + + + SR L+RVE GEE+ ++N+G VA+L+P + + R +L
Sbjct 1 METVNIHQAKTNLSRLLSRVELGEEIIISNEGIPVAKLVPFRTSSNRRASL 51
>gi|301064252|ref|ZP_07204695.1| toxin-antitoxin system, antitoxin component, PHD family [delta
proteobacterium NaphS2]
gi|300441697|gb|EFK06019.1| toxin-antitoxin system, antitoxin component, PHD family [delta
proteobacterium NaphS2]
Length=89
Score = 42.0 bits (97), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 19/59 (33%), Positives = 41/59 (70%), Gaps = 2/59 (3%)
Query 8 VEAIGIRELRQHASRYLARVEAGEELGVTNKGRLVARLIPVQ--AAERSREALIESGVL 64
+E+IGIR L+++ SRY+ +V++G+ + +T++ + +A +IP + + LI+SG++
Sbjct 1 MESIGIRHLKENLSRYMKQVKSGQSIVITDRKKEIAVIIPFERTPVKEKVWPLIQSGMV 59
>gi|339481714|ref|YP_004693500.1| prevent-host-death family protein [Nitrosomonas sp. Is79A3]
gi|338803859|gb|AEJ00101.1| prevent-host-death family protein [Nitrosomonas sp. Is79A3]
Length=81
Score = 42.0 bits (97), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 16/38 (43%), Positives = 26/38 (69%), Gaps = 0/38 (0%)
Query 10 AIGIRELRQHASRYLARVEAGEELGVTNKGRLVARLIP 47
++ + ELRQH YL +V+AGE + +T G+ +A +IP
Sbjct 3 SVNVTELRQHLPEYLKQVQAGEAIAITLHGKTIAHIIP 40
>gi|169830416|ref|YP_001716398.1| prevent-host-death family protein [Candidatus Desulforudis audaxviator
MP104C]
gi|169637260|gb|ACA58766.1| prevent-host-death family protein [Candidatus Desulforudis audaxviator
MP104C]
Length=88
Score = 41.6 bits (96), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 17/39 (44%), Positives = 28/39 (72%), Gaps = 0/39 (0%)
Query 11 IGIRELRQHASRYLARVEAGEELGVTNKGRLVARLIPVQ 49
IGIRE++ SRY+ R++ GE + +T + VA+L+P+Q
Sbjct 3 IGIREMKTRFSRYIQRIKEGETIIITERNTPVAKLVPIQ 41
Lambda K H
0.317 0.133 0.354
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 129711308684
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40