BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv3418c
Length=100
Score E
Sequences producing significant alignments: (Bits) Value
gi|15610554|ref|NP_217935.1| co-chaperonin GroES [Mycobacterium ... 196 8e-49
gi|15825763|pdb|1HX5|A Chain A, Crystal Structure Of M. Tubercul... 196 1e-48
gi|254823100|ref|ZP_05228101.1| co-chaperonin GroES [Mycobacteri... 195 2e-48
gi|289759578|ref|ZP_06518956.1| hsp10-like protein [Mycobacteriu... 195 2e-48
gi|118470431|ref|YP_885961.1| co-chaperonin GroES [Mycobacterium... 194 3e-48
gi|118616656|ref|YP_904988.1| co-chaperonin GroES [Mycobacterium... 193 6e-48
gi|41410362|ref|NP_963198.1| co-chaperonin GroES [Mycobacterium ... 192 2e-47
gi|120402503|ref|YP_952332.1| co-chaperonin GroES [Mycobacterium... 191 2e-47
gi|167968695|ref|ZP_02550972.1| chaperonin Cpn10 [Mycobacterium ... 191 3e-47
gi|108798125|ref|YP_638322.1| chaperonin Cpn10 [Mycobacterium sp... 190 7e-47
gi|169630811|ref|YP_001704460.1| co-chaperonin GroES [Mycobacter... 189 9e-47
gi|54022853|ref|YP_117095.1| co-chaperonin GroES [Nocardia farci... 188 2e-46
gi|342861901|ref|ZP_08718546.1| co-chaperonin GroES [Mycobacteri... 188 2e-46
gi|312140836|ref|YP_004008172.1| chaperonin groes [Rhodococcus e... 188 3e-46
gi|149974|gb|AAA25365.1| immunogenic protein MPB57 [Mycobacteriu... 187 7e-46
gi|333921691|ref|YP_004495272.1| 10 kDa chaperonin [Amycolicicoc... 184 3e-45
gi|333991878|ref|YP_004524492.1| molecular chaperone GroES [Myco... 180 5e-44
gi|15827109|ref|NP_301372.1| co-chaperonin GroES [Mycobacterium ... 176 7e-43
gi|1942632|pdb|1LEP|A Chain A, Three-Dimensional Structure Of Th... 176 1e-42
gi|300779765|ref|ZP_07089621.1| chaperone GroES [Corynebacterium... 170 6e-41
gi|111023152|ref|YP_706124.1| co-chaperonin GroES [Rhodococcus j... 168 2e-40
gi|237786296|ref|YP_002907001.1| molecular chaperone protein [Co... 165 2e-39
gi|258651446|ref|YP_003200602.1| chaperonin Cpn10 [Nakamurella m... 165 2e-39
gi|330470085|ref|YP_004407828.1| chaperonin Cpn10 [Verrucosispor... 164 4e-39
gi|317508306|ref|ZP_07965986.1| chaperonin 10 kDa subunit protei... 163 7e-39
gi|227505276|ref|ZP_03935325.1| co-chaperonin GroES [Corynebacte... 163 8e-39
gi|284992820|ref|YP_003411374.1| chaperonin Cpn10 [Geodermatophi... 162 2e-38
gi|25027157|ref|NP_737211.1| co-chaperonin GroES [Corynebacteriu... 161 4e-38
gi|254552523|ref|ZP_05142970.1| co-chaperonin GroES [Mycobacteri... 160 4e-38
gi|262201666|ref|YP_003272874.1| chaperonin Cpn10 [Gordonia bron... 160 4e-38
gi|341824233|gb|AEK91754.1| Chaperonin [Corynebacterium pseudotu... 160 6e-38
gi|29839310|sp|Q8CY28.2|CH10_COREF RecName: Full=10 kDa chaperon... 160 7e-38
gi|72162998|ref|YP_290655.1| 10 kD chaperone [Thermobifida fusca... 160 8e-38
gi|331699108|ref|YP_004335347.1| 10 kDa chaperonin [Pseudonocard... 159 1e-37
gi|336326371|ref|YP_004606337.1| molecular chaperone [Corynebact... 159 1e-37
gi|324998044|ref|ZP_08119156.1| chaperonin Cpn10 [Pseudonocardia... 159 1e-37
gi|296394428|ref|YP_003659312.1| chaperonin Cpn10 [Segniliparus ... 159 1e-37
gi|296268606|ref|YP_003651238.1| chaperonin Cpn10 [Thermobispora... 159 2e-37
gi|271962700|ref|YP_003336896.1| co-chaperonin GroES [Streptospo... 158 2e-37
gi|38233184|ref|NP_938951.1| co-chaperonin GroES [Corynebacteriu... 158 2e-37
gi|260579177|ref|ZP_05847067.1| chaperonin GroES [Corynebacteriu... 158 2e-37
gi|317124154|ref|YP_004098266.1| chaperonin Cpn10 [Intrasporangi... 157 3e-37
gi|68536819|ref|YP_251524.1| co-chaperonin GroES [Corynebacteriu... 157 3e-37
gi|256380530|ref|YP_003104190.1| chaperonin Cpn10 [Actinosynnema... 157 4e-37
gi|213965031|ref|ZP_03393230.1| chaperonin GroS [Corynebacterium... 157 5e-37
gi|145596353|ref|YP_001160650.1| chaperonin Cpn10 [Salinispora t... 157 6e-37
gi|159039751|ref|YP_001539004.1| chaperonin Cpn10 [Salinispora a... 156 7e-37
gi|343928272|ref|ZP_08767725.1| 10 kDa chaperonin [Gordonia alka... 156 1e-36
gi|134103145|ref|YP_001108806.1| 10 kD chaperonin cpn10 [Sacchar... 155 1e-36
gi|319950732|ref|ZP_08024628.1| co-chaperonin GroES [Dietzia cin... 155 1e-36
>gi|15610554|ref|NP_217935.1| co-chaperonin GroES [Mycobacterium tuberculosis H37Rv]
gi|15843014|ref|NP_338051.1| co-chaperonin GroES [Mycobacterium tuberculosis CDC1551]
gi|31794599|ref|NP_857092.1| co-chaperonin GroES [Mycobacterium bovis AF2122/97]
83 more sequence titles
Length=100
Score = 196 bits (499), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 99/100 (99%), Positives = 100/100 (100%), Gaps = 0/100 (0%)
Query 1 VAKVNIKPLEDKILVQANEAETTTASGLVIPDTAKEKPQEGTVVAVGPGRWDEDGEKRIP 60
+AKVNIKPLEDKILVQANEAETTTASGLVIPDTAKEKPQEGTVVAVGPGRWDEDGEKRIP
Sbjct 1 MAKVNIKPLEDKILVQANEAETTTASGLVIPDTAKEKPQEGTVVAVGPGRWDEDGEKRIP 60
Query 61 LDVAEGDTVIYSKYGGTEIKYNGEEYLILSARDVLAVVSK 100
LDVAEGDTVIYSKYGGTEIKYNGEEYLILSARDVLAVVSK
Sbjct 61 LDVAEGDTVIYSKYGGTEIKYNGEEYLILSARDVLAVVSK 100
>gi|15825763|pdb|1HX5|A Chain A, Crystal Structure Of M. Tuberculosis Chaperonin-10
gi|15825764|pdb|1HX5|B Chain B, Crystal Structure Of M. Tuberculosis Chaperonin-10
gi|15825765|pdb|1HX5|C Chain C, Crystal Structure Of M. Tuberculosis Chaperonin-10
18 more sequence titles
gi|15825766|pdb|1HX5|D Chain D, Crystal Structure Of M. Tuberculosis Chaperonin-10
gi|15825767|pdb|1HX5|E Chain E, Crystal Structure Of M. Tuberculosis Chaperonin-10
gi|15825768|pdb|1HX5|F Chain F, Crystal Structure Of M. Tuberculosis Chaperonin-10
gi|15825769|pdb|1HX5|G Chain G, Crystal Structure Of M. Tuberculosis Chaperonin-10
gi|34811499|pdb|1P3H|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis
Chaperonin 10 Tetradecamer
gi|34811500|pdb|1P3H|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis
Chaperonin 10 Tetradecamer
gi|34811501|pdb|1P3H|C Chain C, Crystal Structure Of The Mycobacterium Tuberculosis
Chaperonin 10 Tetradecamer
gi|34811502|pdb|1P3H|D Chain D, Crystal Structure Of The Mycobacterium Tuberculosis
Chaperonin 10 Tetradecamer
gi|34811503|pdb|1P3H|E Chain E, Crystal Structure Of The Mycobacterium Tuberculosis
Chaperonin 10 Tetradecamer
gi|34811504|pdb|1P3H|F Chain F, Crystal Structure Of The Mycobacterium Tuberculosis
Chaperonin 10 Tetradecamer
gi|34811505|pdb|1P3H|G Chain G, Crystal Structure Of The Mycobacterium Tuberculosis
Chaperonin 10 Tetradecamer
gi|34811506|pdb|1P3H|H Chain H, Crystal Structure Of The Mycobacterium Tuberculosis
Chaperonin 10 Tetradecamer
gi|34811507|pdb|1P3H|I Chain I, Crystal Structure Of The Mycobacterium Tuberculosis
Chaperonin 10 Tetradecamer
gi|34811508|pdb|1P3H|J Chain J, Crystal Structure Of The Mycobacterium Tuberculosis
Chaperonin 10 Tetradecamer
gi|34811509|pdb|1P3H|K Chain K, Crystal Structure Of The Mycobacterium Tuberculosis
Chaperonin 10 Tetradecamer
gi|34811510|pdb|1P3H|L Chain L, Crystal Structure Of The Mycobacterium Tuberculosis
Chaperonin 10 Tetradecamer
gi|34811511|pdb|1P3H|M Chain M, Crystal Structure Of The Mycobacterium Tuberculosis
Chaperonin 10 Tetradecamer
gi|34811512|pdb|1P3H|N Chain N, Crystal Structure Of The Mycobacterium Tuberculosis
Chaperonin 10 Tetradecamer
Length=99
Score = 196 bits (497), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 99/99 (100%), Positives = 99/99 (100%), Gaps = 0/99 (0%)
Query 2 AKVNIKPLEDKILVQANEAETTTASGLVIPDTAKEKPQEGTVVAVGPGRWDEDGEKRIPL 61
AKVNIKPLEDKILVQANEAETTTASGLVIPDTAKEKPQEGTVVAVGPGRWDEDGEKRIPL
Sbjct 1 AKVNIKPLEDKILVQANEAETTTASGLVIPDTAKEKPQEGTVVAVGPGRWDEDGEKRIPL 60
Query 62 DVAEGDTVIYSKYGGTEIKYNGEEYLILSARDVLAVVSK 100
DVAEGDTVIYSKYGGTEIKYNGEEYLILSARDVLAVVSK
Sbjct 61 DVAEGDTVIYSKYGGTEIKYNGEEYLILSARDVLAVVSK 99
>gi|254823100|ref|ZP_05228101.1| co-chaperonin GroES [Mycobacterium intracellulare ATCC 13950]
gi|296168775|ref|ZP_06850461.1| chaperone GroES [Mycobacterium parascrofulaceum ATCC BAA-614]
gi|295896536|gb|EFG76181.1| chaperone GroES [Mycobacterium parascrofulaceum ATCC BAA-614]
Length=100
Score = 195 bits (496), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 98/100 (98%), Positives = 100/100 (100%), Gaps = 0/100 (0%)
Query 1 VAKVNIKPLEDKILVQANEAETTTASGLVIPDTAKEKPQEGTVVAVGPGRWDEDGEKRIP 60
+AKVNIKPLEDKILVQANEAETTTASGLVIPDTAKEKPQEGTVVAVGPGRWDEDGEKRIP
Sbjct 1 MAKVNIKPLEDKILVQANEAETTTASGLVIPDTAKEKPQEGTVVAVGPGRWDEDGEKRIP 60
Query 61 LDVAEGDTVIYSKYGGTEIKYNGEEYLILSARDVLAVVSK 100
LDV+EGDTVIYSKYGGTEIKYNGEEYLILSARDVLAVVSK
Sbjct 61 LDVSEGDTVIYSKYGGTEIKYNGEEYLILSARDVLAVVSK 100
>gi|289759578|ref|ZP_06518956.1| hsp10-like protein [Mycobacterium tuberculosis T85]
gi|289715142|gb|EFD79154.1| hsp10-like protein [Mycobacterium tuberculosis T85]
Length=100
Score = 195 bits (496), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 98/100 (98%), Positives = 100/100 (100%), Gaps = 0/100 (0%)
Query 1 VAKVNIKPLEDKILVQANEAETTTASGLVIPDTAKEKPQEGTVVAVGPGRWDEDGEKRIP 60
+AKVNIKPLEDKILVQANEAETTTASGLVIPDTAKEKPQEGTVVAVGPGRWDEDGEKRIP
Sbjct 1 MAKVNIKPLEDKILVQANEAETTTASGLVIPDTAKEKPQEGTVVAVGPGRWDEDGEKRIP 60
Query 61 LDVAEGDTVIYSKYGGTEIKYNGEEYLILSARDVLAVVSK 100
LDVAEGDTVIYSKYGGTEIKYNGEEYLILSARDVLAVVS+
Sbjct 61 LDVAEGDTVIYSKYGGTEIKYNGEEYLILSARDVLAVVSQ 100
>gi|118470431|ref|YP_885961.1| co-chaperonin GroES [Mycobacterium smegmatis str. MC2 155]
gi|166198385|sp|A0QSS3.1|CH10_MYCS2 RecName: Full=10 kDa chaperonin; AltName: Full=GroES protein;
AltName: Full=Protein Cpn10
gi|118171718|gb|ABK72614.1| chaperonin GroS [Mycobacterium smegmatis str. MC2 155]
Length=100
Score = 194 bits (494), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 98/100 (98%), Positives = 99/100 (99%), Gaps = 0/100 (0%)
Query 1 VAKVNIKPLEDKILVQANEAETTTASGLVIPDTAKEKPQEGTVVAVGPGRWDEDGEKRIP 60
+A VNIKPLEDKILVQANEAETTTASGLVIPDTAKEKPQEGTVVAVGPGRWDEDGEKRIP
Sbjct 1 MASVNIKPLEDKILVQANEAETTTASGLVIPDTAKEKPQEGTVVAVGPGRWDEDGEKRIP 60
Query 61 LDVAEGDTVIYSKYGGTEIKYNGEEYLILSARDVLAVVSK 100
LDVAEGDTVIYSKYGGTEIKYNGEEYLILSARDVLAVVSK
Sbjct 61 LDVAEGDTVIYSKYGGTEIKYNGEEYLILSARDVLAVVSK 100
>gi|118616656|ref|YP_904988.1| co-chaperonin GroES [Mycobacterium ulcerans Agy99]
gi|183981145|ref|YP_001849436.1| 10 kDa chaperone (GroES) [Mycobacterium marinum M]
gi|166198387|sp|A0PME8.1|CH10_MYCUA RecName: Full=10 kDa chaperonin; AltName: Full=GroES protein;
AltName: Full=Protein Cpn10
gi|226704014|sp|B2HD09.1|CH10_MYCMM RecName: Full=10 kDa chaperonin; AltName: Full=GroES protein;
AltName: Full=Protein Cpn10
gi|118568766|gb|ABL03517.1| 10 kDa chaperone (GroES) [Mycobacterium ulcerans Agy99]
gi|183174471|gb|ACC39581.1| 10 kDa chaperone (GroES) [Mycobacterium marinum M]
Length=100
Score = 193 bits (491), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 98/100 (98%), Positives = 99/100 (99%), Gaps = 0/100 (0%)
Query 1 VAKVNIKPLEDKILVQANEAETTTASGLVIPDTAKEKPQEGTVVAVGPGRWDEDGEKRIP 60
+AKVNIKPLEDKILVQANEAETTTASGLVIPDTAKEKPQEGTVVAVGPGRWDEDGEKRIP
Sbjct 1 MAKVNIKPLEDKILVQANEAETTTASGLVIPDTAKEKPQEGTVVAVGPGRWDEDGEKRIP 60
Query 61 LDVAEGDTVIYSKYGGTEIKYNGEEYLILSARDVLAVVSK 100
LDVAEGDTVIYSKYGGTEIKY GEEYLILSARDVLAVVSK
Sbjct 61 LDVAEGDTVIYSKYGGTEIKYGGEEYLILSARDVLAVVSK 100
>gi|41410362|ref|NP_963198.1| co-chaperonin GroES [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|118465749|ref|YP_883501.1| co-chaperonin GroES [Mycobacterium avium 104]
gi|254776796|ref|ZP_05218312.1| co-chaperonin GroES [Mycobacterium avium subsp. avium ATCC 25291]
9 more sequence titles
Length=100
Score = 192 bits (487), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 96/100 (96%), Positives = 99/100 (99%), Gaps = 0/100 (0%)
Query 1 VAKVNIKPLEDKILVQANEAETTTASGLVIPDTAKEKPQEGTVVAVGPGRWDEDGEKRIP 60
+AKVNIKPLEDKILVQANEAETTTASGLVIPDTAKEKPQEGTVVAVGPGRWD+DG KRIP
Sbjct 1 MAKVNIKPLEDKILVQANEAETTTASGLVIPDTAKEKPQEGTVVAVGPGRWDDDGAKRIP 60
Query 61 LDVAEGDTVIYSKYGGTEIKYNGEEYLILSARDVLAVVSK 100
LDV+EGDTVIYSKYGGTEIKYNGEEYLILSARDVLAVVSK
Sbjct 61 LDVSEGDTVIYSKYGGTEIKYNGEEYLILSARDVLAVVSK 100
>gi|120402503|ref|YP_952332.1| co-chaperonin GroES [Mycobacterium vanbaalenii PYR-1]
gi|145225501|ref|YP_001136179.1| co-chaperonin GroES [Mycobacterium gilvum PYR-GCK]
gi|315445854|ref|YP_004078733.1| Co-chaperonin GroES [Mycobacterium sp. Spyr1]
gi|166198388|sp|A1T576.1|CH10_MYCVP RecName: Full=10 kDa chaperonin; AltName: Full=GroES protein;
AltName: Full=Protein Cpn10
gi|189044110|sp|A4TEN7.1|CH10_MYCGI RecName: Full=10 kDa chaperonin; AltName: Full=GroES protein;
AltName: Full=Protein Cpn10
gi|119955321|gb|ABM12326.1| chaperonin Cpn10 [Mycobacterium vanbaalenii PYR-1]
gi|145217987|gb|ABP47391.1| chaperonin Cpn10 [Mycobacterium gilvum PYR-GCK]
gi|315264157|gb|ADU00899.1| Co-chaperonin GroES [Mycobacterium sp. Spyr1]
Length=100
Score = 191 bits (486), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 96/100 (96%), Positives = 98/100 (98%), Gaps = 0/100 (0%)
Query 1 VAKVNIKPLEDKILVQANEAETTTASGLVIPDTAKEKPQEGTVVAVGPGRWDEDGEKRIP 60
+A VNIKPLEDKILVQANEAETTTASGLVIPDTAKEKPQEGTVVAVGPGRWDEDGEKRIP
Sbjct 1 MASVNIKPLEDKILVQANEAETTTASGLVIPDTAKEKPQEGTVVAVGPGRWDEDGEKRIP 60
Query 61 LDVAEGDTVIYSKYGGTEIKYNGEEYLILSARDVLAVVSK 100
LDV+EGD VIYSKYGGTEIKYNGEEYLILSARDVLAVVSK
Sbjct 61 LDVSEGDVVIYSKYGGTEIKYNGEEYLILSARDVLAVVSK 100
>gi|167968695|ref|ZP_02550972.1| chaperonin Cpn10 [Mycobacterium tuberculosis H37Ra]
Length=97
Score = 191 bits (485), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 96/97 (99%), Positives = 97/97 (100%), Gaps = 0/97 (0%)
Query 4 VNIKPLEDKILVQANEAETTTASGLVIPDTAKEKPQEGTVVAVGPGRWDEDGEKRIPLDV 63
+NIKPLEDKILVQANEAETTTASGLVIPDTAKEKPQEGTVVAVGPGRWDEDGEKRIPLDV
Sbjct 1 MNIKPLEDKILVQANEAETTTASGLVIPDTAKEKPQEGTVVAVGPGRWDEDGEKRIPLDV 60
Query 64 AEGDTVIYSKYGGTEIKYNGEEYLILSARDVLAVVSK 100
AEGDTVIYSKYGGTEIKYNGEEYLILSARDVLAVVSK
Sbjct 61 AEGDTVIYSKYGGTEIKYNGEEYLILSARDVLAVVSK 97
>gi|108798125|ref|YP_638322.1| chaperonin Cpn10 [Mycobacterium sp. MCS]
gi|119867221|ref|YP_937173.1| chaperonin Cpn10 [Mycobacterium sp. KMS]
gi|126433783|ref|YP_001069474.1| chaperonin Cpn10 [Mycobacterium sp. JLS]
gi|108768544|gb|ABG07266.1| chaperonin Cpn10 [Mycobacterium sp. MCS]
gi|119693310|gb|ABL90383.1| chaperonin Cpn10 [Mycobacterium sp. KMS]
gi|126233583|gb|ABN96983.1| chaperonin Cpn10 [Mycobacterium sp. JLS]
Length=127
Score = 190 bits (482), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 95/100 (95%), Positives = 99/100 (99%), Gaps = 0/100 (0%)
Query 1 VAKVNIKPLEDKILVQANEAETTTASGLVIPDTAKEKPQEGTVVAVGPGRWDEDGEKRIP 60
VA VNIKPLEDKILVQANEAETTTASGLVIPDTAKEKPQEGTVVAVGPGRWD++GEKRIP
Sbjct 28 VASVNIKPLEDKILVQANEAETTTASGLVIPDTAKEKPQEGTVVAVGPGRWDDEGEKRIP 87
Query 61 LDVAEGDTVIYSKYGGTEIKYNGEEYLILSARDVLAVVSK 100
LDV+EGDTVIYSKYGGTEIKYNGEEYLILSARDVLAVV+K
Sbjct 88 LDVSEGDTVIYSKYGGTEIKYNGEEYLILSARDVLAVVNK 127
>gi|169630811|ref|YP_001704460.1| co-chaperonin GroES [Mycobacterium abscessus ATCC 19977]
gi|169242778|emb|CAM63806.1| 10 kDa chaperonin (GroES) [Mycobacterium abscessus]
gi|336441312|gb|AEI54881.1| co-chaperonin GroES [Mycobacterium abscessus]
gi|336441314|gb|AEI54882.1| co-chaperonin GroES [Mycobacterium franklinii]
gi|336441316|gb|AEI54883.1| co-chaperonin GroES [Mycobacterium bolletii]
gi|336441318|gb|AEI54884.1| co-chaperonin GroES [Mycobacterium chelonae]
gi|336441320|gb|AEI54885.1| co-chaperonin GroES [Mycobacterium immunogenum]
gi|336441322|gb|AEI54886.1| co-chaperonin GroES [Mycobacterium massiliense]
Length=99
Score = 189 bits (481), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 95/97 (98%), Positives = 96/97 (99%), Gaps = 0/97 (0%)
Query 4 VNIKPLEDKILVQANEAETTTASGLVIPDTAKEKPQEGTVVAVGPGRWDEDGEKRIPLDV 63
VNIKPLEDKILVQANEAETTTASGLVIPDTAKEKPQEGTVVAVGPGRWDEDGEKRIPLDV
Sbjct 3 VNIKPLEDKILVQANEAETTTASGLVIPDTAKEKPQEGTVVAVGPGRWDEDGEKRIPLDV 62
Query 64 AEGDTVIYSKYGGTEIKYNGEEYLILSARDVLAVVSK 100
+EGD VIYSKYGGTEIKYNGEEYLILSARDVLAVVSK
Sbjct 63 SEGDVVIYSKYGGTEIKYNGEEYLILSARDVLAVVSK 99
>gi|54022853|ref|YP_117095.1| co-chaperonin GroES [Nocardia farcinica IFM 10152]
gi|60389505|sp|Q5Z1G0.1|CH10_NOCFA RecName: Full=10 kDa chaperonin; AltName: Full=GroES protein;
AltName: Full=Protein Cpn10
gi|54014361|dbj|BAD55731.1| putative chaperonin GroES [Nocardia farcinica IFM 10152]
Length=100
Score = 188 bits (478), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 95/100 (95%), Positives = 96/100 (96%), Gaps = 0/100 (0%)
Query 1 VAKVNIKPLEDKILVQANEAETTTASGLVIPDTAKEKPQEGTVVAVGPGRWDEDGEKRIP 60
+A VNIKPLEDKILVQANEAETTTASGLVIPDTAKEKPQEGTVVAVGPGRWDEDGEKRIP
Sbjct 1 MASVNIKPLEDKILVQANEAETTTASGLVIPDTAKEKPQEGTVVAVGPGRWDEDGEKRIP 60
Query 61 LDVAEGDTVIYSKYGGTEIKYNGEEYLILSARDVLAVVSK 100
LDV EGDTVIYSKYGGTEIKY GEEYLILSARDVLAVV K
Sbjct 61 LDVQEGDTVIYSKYGGTEIKYQGEEYLILSARDVLAVVGK 100
>gi|342861901|ref|ZP_08718546.1| co-chaperonin GroES [Mycobacterium colombiense CECT 3035]
gi|342130718|gb|EGT84022.1| co-chaperonin GroES [Mycobacterium colombiense CECT 3035]
Length=100
Score = 188 bits (477), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 95/100 (95%), Positives = 97/100 (97%), Gaps = 0/100 (0%)
Query 1 VAKVNIKPLEDKILVQANEAETTTASGLVIPDTAKEKPQEGTVVAVGPGRWDEDGEKRIP 60
+AKV IKPLEDKILVQANEAETTTASGLVIPDTAKEKPQEGTVVAVGPGRWDEDG KRIP
Sbjct 1 MAKVKIKPLEDKILVQANEAETTTASGLVIPDTAKEKPQEGTVVAVGPGRWDEDGAKRIP 60
Query 61 LDVAEGDTVIYSKYGGTEIKYNGEEYLILSARDVLAVVSK 100
LDV+EGDTVIYSKYGGTEIKY GEEYLILSARDVLAVVSK
Sbjct 61 LDVSEGDTVIYSKYGGTEIKYGGEEYLILSARDVLAVVSK 100
>gi|312140836|ref|YP_004008172.1| chaperonin groes [Rhodococcus equi 103S]
gi|325675527|ref|ZP_08155211.1| chaperone GroES [Rhodococcus equi ATCC 33707]
gi|311890175|emb|CBH49493.1| chaperonin GroES [Rhodococcus equi 103S]
gi|325553498|gb|EGD23176.1| chaperone GroES [Rhodococcus equi ATCC 33707]
Length=100
Score = 188 bits (477), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 94/100 (94%), Positives = 97/100 (97%), Gaps = 0/100 (0%)
Query 1 VAKVNIKPLEDKILVQANEAETTTASGLVIPDTAKEKPQEGTVVAVGPGRWDEDGEKRIP 60
+A VNIKPLEDKILVQANEAETTTASGLVIPDTAKEKPQEGTVVAVGPGRWDEDGEKRIP
Sbjct 1 MASVNIKPLEDKILVQANEAETTTASGLVIPDTAKEKPQEGTVVAVGPGRWDEDGEKRIP 60
Query 61 LDVAEGDTVIYSKYGGTEIKYNGEEYLILSARDVLAVVSK 100
LDV EGDTVIYSKYGGTEIKY G+EYLILSARDVLAVV+K
Sbjct 61 LDVQEGDTVIYSKYGGTEIKYAGQEYLILSARDVLAVVAK 100
>gi|149974|gb|AAA25365.1| immunogenic protein MPB57 [Mycobacterium bovis]
gi|581313|emb|CAA32149.1| unnamed protein product [Mycobacterium bovis]
gi|226208|prf||1501258A immunogenic protein MPB57
Length=100
Score = 187 bits (474), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 93/96 (97%), Positives = 95/96 (99%), Gaps = 0/96 (0%)
Query 1 VAKVNIKPLEDKILVQANEAETTTASGLVIPDTAKEKPQEGTVVAVGPGRWDEDGEKRIP 60
+AKVNIKPLEDKILVQANEAETTTASGLVIPDTAKEKPQEGTVVAVGPGRWDEDGEKRIP
Sbjct 1 MAKVNIKPLEDKILVQANEAETTTASGLVIPDTAKEKPQEGTVVAVGPGRWDEDGEKRIP 60
Query 61 LDVAEGDTVIYSKYGGTEIKYNGEEYLILSARDVLA 96
LDVAEGDTVIYSKYGGTEIKYNGEEYLILSARDV+
Sbjct 61 LDVAEGDTVIYSKYGGTEIKYNGEEYLILSARDVVG 96
>gi|333921691|ref|YP_004495272.1| 10 kDa chaperonin [Amycolicicoccus subflavus DQS3-9A1]
gi|333483912|gb|AEF42472.1| 10 kDa chaperonin [Amycolicicoccus subflavus DQS3-9A1]
Length=100
Score = 184 bits (467), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 92/100 (92%), Positives = 95/100 (95%), Gaps = 0/100 (0%)
Query 1 VAKVNIKPLEDKILVQANEAETTTASGLVIPDTAKEKPQEGTVVAVGPGRWDEDGEKRIP 60
+A VNIKPLEDKILVQANEAETTTASGLVIPDTAKEKPQEGTV+AVGPGRWDE G KRIP
Sbjct 1 MASVNIKPLEDKILVQANEAETTTASGLVIPDTAKEKPQEGTVIAVGPGRWDESGAKRIP 60
Query 61 LDVAEGDTVIYSKYGGTEIKYNGEEYLILSARDVLAVVSK 100
LDV EGD VIYSKYGGTEIKY+GEEYLILSARDVLAVVSK
Sbjct 61 LDVKEGDVVIYSKYGGTEIKYSGEEYLILSARDVLAVVSK 100
>gi|333991878|ref|YP_004524492.1| molecular chaperone GroES [Mycobacterium sp. JDM601]
gi|333487846|gb|AEF37238.1| 10 kDa chaperone (GroES) [Mycobacterium sp. JDM601]
Length=97
Score = 180 bits (457), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 90/97 (93%), Positives = 93/97 (96%), Gaps = 0/97 (0%)
Query 4 VNIKPLEDKILVQANEAETTTASGLVIPDTAKEKPQEGTVVAVGPGRWDEDGEKRIPLDV 63
+NIKPLEDKILVQANEAETTTASGLVIPDTAKEKPQEGTVVAVGPGRWDEDG+KRIPLDV
Sbjct 1 MNIKPLEDKILVQANEAETTTASGLVIPDTAKEKPQEGTVVAVGPGRWDEDGDKRIPLDV 60
Query 64 AEGDTVIYSKYGGTEIKYNGEEYLILSARDVLAVVSK 100
EGD VIYSKYGGTEIKY GEEYLILSARDVLA+V K
Sbjct 61 KEGDVVIYSKYGGTEIKYAGEEYLILSARDVLAIVGK 97
>gi|15827109|ref|NP_301372.1| co-chaperonin GroES [Mycobacterium leprae TN]
gi|221229587|ref|YP_002503003.1| co-chaperonin GroES [Mycobacterium leprae Br4923]
gi|116199|sp|P24301.2|CH10_MYCLE RecName: Full=10 kDa chaperonin; AltName: Full=10 kDa antigen;
AltName: Full=GroES protein; AltName: Full=Protein Cpn10
gi|254813851|sp|B8ZUD1.1|CH10_MYCLB RecName: Full=10 kDa chaperonin; AltName: Full=GroES protein;
AltName: Full=Protein Cpn10
gi|467129|gb|AAA17311.1| chpA [Mycobacterium leprae]
gi|6624972|emb|CAB63917.1| groES [Mycobacterium leprae]
gi|13092657|emb|CAC29888.1| 10 kD chaperonin [Mycobacterium leprae]
gi|219932694|emb|CAR70473.1| 10 kD chaperonin [Mycobacterium leprae Br4923]
Length=100
Score = 176 bits (447), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 89/100 (89%), Positives = 93/100 (93%), Gaps = 0/100 (0%)
Query 1 VAKVNIKPLEDKILVQANEAETTTASGLVIPDTAKEKPQEGTVVAVGPGRWDEDGEKRIP 60
+AKV IKPLEDKILVQA EAET T SGLVIP+ AKEKPQEGTVVAVGPGRWDEDG KRIP
Sbjct 1 MAKVKIKPLEDKILVQAGEAETMTPSGLVIPENAKEKPQEGTVVAVGPGRWDEDGAKRIP 60
Query 61 LDVAEGDTVIYSKYGGTEIKYNGEEYLILSARDVLAVVSK 100
+DV+EGD VIYSKYGGTEIKYNGEEYLILSARDVLAVVSK
Sbjct 61 VDVSEGDIVIYSKYGGTEIKYNGEEYLILSARDVLAVVSK 100
>gi|1942632|pdb|1LEP|A Chain A, Three-Dimensional Structure Of The Immunodominant Heat-
Shock Protein Chaperonin-10 Of Mycobacterium Leprae
gi|1942633|pdb|1LEP|B Chain B, Three-Dimensional Structure Of The Immunodominant Heat-
Shock Protein Chaperonin-10 Of Mycobacterium Leprae
gi|1942634|pdb|1LEP|C Chain C, Three-Dimensional Structure Of The Immunodominant Heat-
Shock Protein Chaperonin-10 Of Mycobacterium Leprae
gi|1942635|pdb|1LEP|D Chain D, Three-Dimensional Structure Of The Immunodominant Heat-
Shock Protein Chaperonin-10 Of Mycobacterium Leprae
gi|1942636|pdb|1LEP|E Chain E, Three-Dimensional Structure Of The Immunodominant Heat-
Shock Protein Chaperonin-10 Of Mycobacterium Leprae
gi|1942637|pdb|1LEP|F Chain F, Three-Dimensional Structure Of The Immunodominant Heat-
Shock Protein Chaperonin-10 Of Mycobacterium Leprae
gi|1942638|pdb|1LEP|G Chain G, Three-Dimensional Structure Of The Immunodominant Heat-
Shock Protein Chaperonin-10 Of Mycobacterium Leprae
Length=99
Score = 176 bits (446), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 89/99 (90%), Positives = 92/99 (93%), Gaps = 0/99 (0%)
Query 2 AKVNIKPLEDKILVQANEAETTTASGLVIPDTAKEKPQEGTVVAVGPGRWDEDGEKRIPL 61
AKV IKPLEDKILVQA EAET T SGLVIP+ AKEKPQEGTVVAVGPGRWDEDG KRIP+
Sbjct 1 AKVKIKPLEDKILVQAGEAETMTPSGLVIPENAKEKPQEGTVVAVGPGRWDEDGAKRIPV 60
Query 62 DVAEGDTVIYSKYGGTEIKYNGEEYLILSARDVLAVVSK 100
DV+EGD VIYSKYGGTEIKYNGEEYLILSARDVLAVVSK
Sbjct 61 DVSEGDIVIYSKYGGTEIKYNGEEYLILSARDVLAVVSK 99
>gi|300779765|ref|ZP_07089621.1| chaperone GroES [Corynebacterium genitalium ATCC 33030]
gi|300533875|gb|EFK54934.1| chaperone GroES [Corynebacterium genitalium ATCC 33030]
Length=124
Score = 170 bits (431), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 82/100 (82%), Positives = 93/100 (93%), Gaps = 0/100 (0%)
Query 1 VAKVNIKPLEDKILVQANEAETTTASGLVIPDTAKEKPQEGTVVAVGPGRWDEDGEKRIP 60
VA VNIKPLEDKILVQ EAETTTASGLVIPD+A+EKPQE TV+AVGPGRWD++GE RIP
Sbjct 25 VANVNIKPLEDKILVQIVEAETTTASGLVIPDSAQEKPQEATVIAVGPGRWDDEGEHRIP 84
Query 61 LDVAEGDTVIYSKYGGTEIKYNGEEYLILSARDVLAVVSK 100
+DV EGDTVI+SKYGGTE+KY+GEEYL+LSARD+LAVV K
Sbjct 85 VDVKEGDTVIFSKYGGTELKYDGEEYLLLSARDLLAVVEK 124
>gi|111023152|ref|YP_706124.1| co-chaperonin GroES [Rhodococcus jostii RHA1]
gi|226305412|ref|YP_002765370.1| 10 kDa chaperonin [Rhodococcus erythropolis PR4]
gi|226365658|ref|YP_002783441.1| co-chaperonin GroES [Rhodococcus opacus B4]
8 more sequence titles
Length=99
Score = 168 bits (426), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 88/100 (88%), Positives = 92/100 (92%), Gaps = 1/100 (1%)
Query 1 VAKVNIKPLEDKILVQANEAETTTASGLVIPDTAKEKPQEGTVVAVGPGRWDEDGEKRIP 60
+A VNIKPLEDKILVQANEAETTTASGLVIPDTAKEKPQEGTVVAVG GR +E G RIP
Sbjct 1 MASVNIKPLEDKILVQANEAETTTASGLVIPDTAKEKPQEGTVVAVGEGRVNEQG-NRIP 59
Query 61 LDVAEGDTVIYSKYGGTEIKYNGEEYLILSARDVLAVVSK 100
+DV EGDTVIYSKYGGTEIKY G+EYLILSARDVLAVVSK
Sbjct 60 VDVKEGDTVIYSKYGGTEIKYAGQEYLILSARDVLAVVSK 99
>gi|237786296|ref|YP_002907001.1| molecular chaperone protein [Corynebacterium kroppenstedtii DSM
44385]
gi|259585876|sp|C4LKV3.1|CH10_CORK4 RecName: Full=10 kDa chaperonin; AltName: Full=GroES protein;
AltName: Full=Protein Cpn10
gi|237759208|gb|ACR18458.1| molecular chaperone protein [Corynebacterium kroppenstedtii DSM
44385]
Length=99
Score = 165 bits (418), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 85/100 (85%), Positives = 91/100 (91%), Gaps = 1/100 (1%)
Query 1 VAKVNIKPLEDKILVQANEAETTTASGLVIPDTAKEKPQEGTVVAVGPGRWDEDGEKRIP 60
+AKVNIKPLEDK+LVQ EAETTTASGLVIPDTAKEKPQE TVVAVGPGR DE+G KR+P
Sbjct 1 MAKVNIKPLEDKLLVQIVEAETTTASGLVIPDTAKEKPQEATVVAVGPGRTDENG-KRVP 59
Query 61 LDVAEGDTVIYSKYGGTEIKYNGEEYLILSARDVLAVVSK 100
+DVAEGD VI+SKYGGTEIKY GEEYLILS RDVLAVV K
Sbjct 60 MDVAEGDVVIFSKYGGTEIKYAGEEYLILSQRDVLAVVEK 99
>gi|258651446|ref|YP_003200602.1| chaperonin Cpn10 [Nakamurella multipartita DSM 44233]
gi|258554671|gb|ACV77613.1| chaperonin Cpn10 [Nakamurella multipartita DSM 44233]
Length=99
Score = 165 bits (418), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 82/100 (82%), Positives = 95/100 (95%), Gaps = 1/100 (1%)
Query 1 VAKVNIKPLEDKILVQANEAETTTASGLVIPDTAKEKPQEGTVVAVGPGRWDEDGEKRIP 60
+A VNI+PLEDKILV+ANEAETTTASG+VIPDTAKEKPQEGTV+AVGPGR+D+ G KRIP
Sbjct 1 MASVNIQPLEDKILVEANEAETTTASGIVIPDTAKEKPQEGTVLAVGPGRYDDSG-KRIP 59
Query 61 LDVAEGDTVIYSKYGGTEIKYNGEEYLILSARDVLAVVSK 100
+DVAEGD VIYSKYGGTE+KY+G+EYL+LSARDVLA V+K
Sbjct 60 IDVAEGDVVIYSKYGGTEVKYSGKEYLLLSARDVLAKVNK 99
>gi|330470085|ref|YP_004407828.1| chaperonin Cpn10 [Verrucosispora maris AB-18-032]
gi|328813056|gb|AEB47228.1| chaperonin Cpn10 [Verrucosispora maris AB-18-032]
Length=102
Score = 164 bits (415), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 80/98 (82%), Positives = 92/98 (94%), Gaps = 1/98 (1%)
Query 3 KVNIKPLEDKILVQANEAETTTASGLVIPDTAKEKPQEGTVVAVGPGRWDEDGEKRIPLD 62
KV IKPLED+ILVQANEAETTTASG+VIPDTAKEKPQEGTV+AVGPGR+D+DG+ RIP+D
Sbjct 6 KVAIKPLEDRILVQANEAETTTASGIVIPDTAKEKPQEGTVLAVGPGRFDDDGD-RIPMD 64
Query 63 VAEGDTVIYSKYGGTEIKYNGEEYLILSARDVLAVVSK 100
V GDTV+YSKYGGTE+KY GEEYL+LSARDVLA++ K
Sbjct 65 VKVGDTVLYSKYGGTEVKYAGEEYLVLSARDVLAIIEK 102
>gi|317508306|ref|ZP_07965986.1| chaperonin 10 kDa subunit protein [Segniliparus rugosus ATCC
BAA-974]
gi|316253481|gb|EFV12871.1| chaperonin 10 kDa subunit protein [Segniliparus rugosus ATCC
BAA-974]
Length=99
Score = 163 bits (413), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 84/100 (84%), Positives = 90/100 (90%), Gaps = 1/100 (1%)
Query 1 VAKVNIKPLEDKILVQANEAETTTASGLVIPDTAKEKPQEGTVVAVGPGRWDEDGEKRIP 60
+A VNIKPLEDKILV+ANEAETTTASGLVIPDTAKEKPQEGTV+AVG GR E G RIP
Sbjct 1 MASVNIKPLEDKILVEANEAETTTASGLVIPDTAKEKPQEGTVIAVGEGRVTEKG-NRIP 59
Query 61 LDVAEGDTVIYSKYGGTEIKYNGEEYLILSARDVLAVVSK 100
LDV GDTVIYSKYGGTEIKYNG+EYLILSARD+LAV+ K
Sbjct 60 LDVKAGDTVIYSKYGGTEIKYNGKEYLILSARDILAVIEK 99
>gi|227505276|ref|ZP_03935325.1| co-chaperonin GroES [Corynebacterium striatum ATCC 6940]
gi|227198175|gb|EEI78223.1| co-chaperonin GroES [Corynebacterium striatum ATCC 6940]
Length=110
Score = 163 bits (413), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 78/96 (82%), Positives = 90/96 (94%), Gaps = 0/96 (0%)
Query 5 NIKPLEDKILVQANEAETTTASGLVIPDTAKEKPQEGTVVAVGPGRWDEDGEKRIPLDVA 64
NIKPLEDK+LVQ EAETTTASGLVIPD+AKEKPQE TVVAVGPGRW+EDG++RI LDV
Sbjct 15 NIKPLEDKVLVQIVEAETTTASGLVIPDSAKEKPQEATVVAVGPGRWNEDGDERIALDVK 74
Query 65 EGDTVIYSKYGGTEIKYNGEEYLILSARDVLAVVSK 100
EGDTVI+SKYGGTE+KY+G+EYL+LSARD+LAV+ K
Sbjct 75 EGDTVIFSKYGGTELKYDGQEYLLLSARDLLAVIEK 110
>gi|284992820|ref|YP_003411374.1| chaperonin Cpn10 [Geodermatophilus obscurus DSM 43160]
gi|284066065|gb|ADB77003.1| chaperonin Cpn10 [Geodermatophilus obscurus DSM 43160]
Length=102
Score = 162 bits (409), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 81/98 (83%), Positives = 90/98 (92%), Gaps = 1/98 (1%)
Query 3 KVNIKPLEDKILVQANEAETTTASGLVIPDTAKEKPQEGTVVAVGPGRWDEDGEKRIPLD 62
KVNIKPLED+++VQANEAETTTASGLVIPDTAKEKPQEGTVVAVGPGR D++G R+PLD
Sbjct 6 KVNIKPLEDRVVVQANEAETTTASGLVIPDTAKEKPQEGTVVAVGPGRVDDNG-NRVPLD 64
Query 63 VAEGDTVIYSKYGGTEIKYNGEEYLILSARDVLAVVSK 100
V GD VIYSKYGGTE+KY GEEYL+LSARD+LAVV K
Sbjct 65 VNVGDVVIYSKYGGTEVKYAGEEYLVLSARDLLAVVEK 102
>gi|25027157|ref|NP_737211.1| co-chaperonin GroES [Corynebacterium efficiens YS-314]
gi|259506708|ref|ZP_05749610.1| chaperonin GroES [Corynebacterium efficiens YS-314]
gi|23492438|dbj|BAC17411.1| putative chaperonin GroES [Corynebacterium efficiens YS-314]
gi|259165691|gb|EEW50245.1| chaperonin GroES [Corynebacterium efficiens YS-314]
Length=104
Score = 161 bits (407), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 79/100 (79%), Positives = 90/100 (90%), Gaps = 1/100 (1%)
Query 1 VAKVNIKPLEDKILVQANEAETTTASGLVIPDTAKEKPQEGTVVAVGPGRWDEDGEKRIP 60
VA VNIKPLEDKILVQ NEAETTTASGLVIPD+AKEKPQE TV+AVGPGR+DE GE RIP
Sbjct 6 VANVNIKPLEDKILVQINEAETTTASGLVIPDSAKEKPQEATVIAVGPGRFDEKGE-RIP 64
Query 61 LDVAEGDTVIYSKYGGTEIKYNGEEYLILSARDVLAVVSK 100
LD+ E D VI+S+YGGTEIK++G EYL+LSARD+LA+V K
Sbjct 65 LDIKEDDVVIFSRYGGTEIKFDGVEYLLLSARDILAIVEK 104
>gi|254552523|ref|ZP_05142970.1| co-chaperonin GroES [Mycobacterium tuberculosis '98-R604 INH-RIF-EM']
Length=94
Score = 160 bits (406), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 80/81 (99%), Positives = 81/81 (100%), Gaps = 0/81 (0%)
Query 1 VAKVNIKPLEDKILVQANEAETTTASGLVIPDTAKEKPQEGTVVAVGPGRWDEDGEKRIP 60
+AKVNIKPLEDKILVQANEAETTTASGLVIPDTAKEKPQEGTVVAVGPGRWDEDGEKRIP
Sbjct 1 MAKVNIKPLEDKILVQANEAETTTASGLVIPDTAKEKPQEGTVVAVGPGRWDEDGEKRIP 60
Query 61 LDVAEGDTVIYSKYGGTEIKY 81
LDVAEGDTVIYSKYGGTEIKY
Sbjct 61 LDVAEGDTVIYSKYGGTEIKY 81
>gi|262201666|ref|YP_003272874.1| chaperonin Cpn10 [Gordonia bronchialis DSM 43247]
gi|262085013|gb|ACY20981.1| chaperonin Cpn10 [Gordonia bronchialis DSM 43247]
Length=99
Score = 160 bits (406), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 84/100 (84%), Positives = 89/100 (89%), Gaps = 1/100 (1%)
Query 1 VAKVNIKPLEDKILVQANEAETTTASGLVIPDTAKEKPQEGTVVAVGPGRWDEDGEKRIP 60
+A VNIKPLEDKILVQA EAETTTASGLVIPDTAKEKPQEGTV+AVG GR E G R+P
Sbjct 1 MASVNIKPLEDKILVQAVEAETTTASGLVIPDTAKEKPQEGTVIAVGEGRVTEQG-NRVP 59
Query 61 LDVAEGDTVIYSKYGGTEIKYNGEEYLILSARDVLAVVSK 100
+DV EGDTVIYSKYGGTEIKY GEEYLILSARDVLAV+ K
Sbjct 60 VDVKEGDTVIYSKYGGTEIKYAGEEYLILSARDVLAVIGK 99
>gi|341824233|gb|AEK91754.1| Chaperonin [Corynebacterium pseudotuberculosis PAT10]
Length=129
Score = 160 bits (405), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 75/100 (75%), Positives = 91/100 (91%), Gaps = 2/100 (2%)
Query 1 VAKVNIKPLEDKILVQANEAETTTASGLVIPDTAKEKPQEGTVVAVGPGRWDEDGEKRIP 60
VA VNIKPLED++LVQ +EAETTTASGLVIPD+AKEKPQEG VVA GPGR+ DG+ R+P
Sbjct 32 VANVNIKPLEDRVLVQISEAETTTASGLVIPDSAKEKPQEGVVVAAGPGRF--DGDDRVP 89
Query 61 LDVAEGDTVIYSKYGGTEIKYNGEEYLILSARDVLAVVSK 100
+D+ EGDTV++SKYGGTE+KYNGEEYL+L+ARDVLA++ K
Sbjct 90 MDIKEGDTVVFSKYGGTELKYNGEEYLLLNARDVLAIIEK 129
>gi|29839310|sp|Q8CY28.2|CH10_COREF RecName: Full=10 kDa chaperonin; AltName: Full=GroES protein;
AltName: Full=Protein Cpn10
Length=99
Score = 160 bits (404), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 78/100 (78%), Positives = 90/100 (90%), Gaps = 1/100 (1%)
Query 1 VAKVNIKPLEDKILVQANEAETTTASGLVIPDTAKEKPQEGTVVAVGPGRWDEDGEKRIP 60
+A VNIKPLEDKILVQ NEAETTTASGLVIPD+AKEKPQE TV+AVGPGR+DE GE RIP
Sbjct 1 MANVNIKPLEDKILVQINEAETTTASGLVIPDSAKEKPQEATVIAVGPGRFDEKGE-RIP 59
Query 61 LDVAEGDTVIYSKYGGTEIKYNGEEYLILSARDVLAVVSK 100
LD+ E D VI+S+YGGTEIK++G EYL+LSARD+LA+V K
Sbjct 60 LDIKEDDVVIFSRYGGTEIKFDGVEYLLLSARDILAIVEK 99
>gi|72162998|ref|YP_290655.1| 10 kD chaperone [Thermobifida fusca YX]
gi|71916730|gb|AAZ56632.1| 10 kD chaperone [Thermobifida fusca YX]
Length=103
Score = 160 bits (404), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 76/98 (78%), Positives = 89/98 (91%), Gaps = 0/98 (0%)
Query 3 KVNIKPLEDKILVQANEAETTTASGLVIPDTAKEKPQEGTVVAVGPGRWDEDGEKRIPLD 62
K+ +KPLED+++VQ EAE TTASGLVIPDTAKEKPQEG V+AVGPGRWD++G KRIPLD
Sbjct 6 KIVLKPLEDRVVVQPLEAEQTTASGLVIPDTAKEKPQEGKVLAVGPGRWDDEGSKRIPLD 65
Query 63 VAEGDTVIYSKYGGTEIKYNGEEYLILSARDVLAVVSK 100
V EGD V+YSKYGGTE+KY+GEEYL+LSARD+LAVV K
Sbjct 66 VKEGDIVLYSKYGGTEVKYDGEEYLVLSARDLLAVVEK 103
>gi|331699108|ref|YP_004335347.1| 10 kDa chaperonin [Pseudonocardia dioxanivorans CB1190]
gi|326953797|gb|AEA27494.1| 10 kDa chaperonin [Pseudonocardia dioxanivorans CB1190]
Length=96
Score = 159 bits (402), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 80/95 (85%), Positives = 89/95 (94%), Gaps = 1/95 (1%)
Query 5 NIKPLEDKILVQANEAETTTASGLVIPDTAKEKPQEGTVVAVGPGRWDEDGEKRIPLDVA 64
NIKPLEDKI+VQA+EAETTTASG+VIPDTAKEKPQEG V+AVGPGR D++G R+PLDVA
Sbjct 3 NIKPLEDKIVVQASEAETTTASGIVIPDTAKEKPQEGKVLAVGPGRIDDNG-NRVPLDVA 61
Query 65 EGDTVIYSKYGGTEIKYNGEEYLILSARDVLAVVS 99
GD VIYSKYGGTE+KYNGEEYLILSARDVLAVV+
Sbjct 62 VGDVVIYSKYGGTEVKYNGEEYLILSARDVLAVVN 96
>gi|336326371|ref|YP_004606337.1| molecular chaperone [Corynebacterium resistens DSM 45100]
gi|336102353|gb|AEI10173.1| molecular chaperone [Corynebacterium resistens DSM 45100]
Length=99
Score = 159 bits (402), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 76/100 (76%), Positives = 90/100 (90%), Gaps = 1/100 (1%)
Query 1 VAKVNIKPLEDKILVQANEAETTTASGLVIPDTAKEKPQEGTVVAVGPGRWDEDGEKRIP 60
+A VNIKPLED++LVQ EAETTTASGLVIPD+AKEKPQE TV+AVGPGRW +D + RIP
Sbjct 1 MANVNIKPLEDRVLVQIVEAETTTASGLVIPDSAKEKPQEATVIAVGPGRWADD-DDRIP 59
Query 61 LDVAEGDTVIYSKYGGTEIKYNGEEYLILSARDVLAVVSK 100
+DV EGDTV++SKYGGTE+KYNGEEYL+LS RD+LAV+ K
Sbjct 60 MDVKEGDTVVFSKYGGTELKYNGEEYLLLSQRDILAVIEK 99
>gi|324998044|ref|ZP_08119156.1| chaperonin Cpn10 [Pseudonocardia sp. P1]
Length=96
Score = 159 bits (402), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 80/95 (85%), Positives = 89/95 (94%), Gaps = 1/95 (1%)
Query 5 NIKPLEDKILVQANEAETTTASGLVIPDTAKEKPQEGTVVAVGPGRWDEDGEKRIPLDVA 64
NIKPLEDKI+VQA+EAETTTASG+VIPDTAKEKPQEG V+AVGPGR D++G R+PLDVA
Sbjct 3 NIKPLEDKIVVQASEAETTTASGIVIPDTAKEKPQEGKVLAVGPGRVDDNG-NRVPLDVA 61
Query 65 EGDTVIYSKYGGTEIKYNGEEYLILSARDVLAVVS 99
GD VIYSKYGGTE+KYNGEEYLILSARDVLAVV+
Sbjct 62 VGDVVIYSKYGGTEVKYNGEEYLILSARDVLAVVN 96
>gi|296394428|ref|YP_003659312.1| chaperonin Cpn10 [Segniliparus rotundus DSM 44985]
gi|296181575|gb|ADG98481.1| Chaperonin Cpn10 [Segniliparus rotundus DSM 44985]
Length=98
Score = 159 bits (402), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 84/97 (87%), Positives = 86/97 (89%), Gaps = 1/97 (1%)
Query 4 VNIKPLEDKILVQANEAETTTASGLVIPDTAKEKPQEGTVVAVGPGRWDEDGEKRIPLDV 63
VNIKPLEDKILVQANEAET TASGLVIPDTAKEKPQEGTVVAVG GR E G RIPLDV
Sbjct 3 VNIKPLEDKILVQANEAETKTASGLVIPDTAKEKPQEGTVVAVGEGRVTEKG-NRIPLDV 61
Query 64 AEGDTVIYSKYGGTEIKYNGEEYLILSARDVLAVVSK 100
GDTVIYSKYGGTEIKY+G EYLILSARD+LAVV K
Sbjct 62 KAGDTVIYSKYGGTEIKYDGTEYLILSARDILAVVEK 98
>gi|296268606|ref|YP_003651238.1| chaperonin Cpn10 [Thermobispora bispora DSM 43833]
gi|296091393|gb|ADG87345.1| chaperonin Cpn10 [Thermobispora bispora DSM 43833]
Length=104
Score = 159 bits (401), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 77/98 (79%), Positives = 87/98 (89%), Gaps = 0/98 (0%)
Query 3 KVNIKPLEDKILVQANEAETTTASGLVIPDTAKEKPQEGTVVAVGPGRWDEDGEKRIPLD 62
KV IKPL D+I+VQ EAE TTASGLVIPDTAKEKPQEG V+AVGPG WDEDGEKRIPLD
Sbjct 7 KVPIKPLGDRIVVQPLEAEQTTASGLVIPDTAKEKPQEGKVLAVGPGNWDEDGEKRIPLD 66
Query 63 VAEGDTVIYSKYGGTEIKYNGEEYLILSARDVLAVVSK 100
V EGD V+YSKYGGTE+K+ GEEYL+LS+RDVLA++ K
Sbjct 67 VKEGDIVLYSKYGGTEVKFGGEEYLVLSSRDVLAIIEK 104
>gi|271962700|ref|YP_003336896.1| co-chaperonin GroES [Streptosporangium roseum DSM 43021]
gi|270505875|gb|ACZ84153.1| co-chaperonin GroES [Streptosporangium roseum DSM 43021]
Length=103
Score = 158 bits (400), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 77/98 (79%), Positives = 87/98 (89%), Gaps = 0/98 (0%)
Query 3 KVNIKPLEDKILVQANEAETTTASGLVIPDTAKEKPQEGTVVAVGPGRWDEDGEKRIPLD 62
KV +KPL D+I+VQ EAE TTASGLVIPDTAKEKPQEG V+AVGPG WDEDG+KRIPLD
Sbjct 6 KVPVKPLGDRIVVQPLEAEQTTASGLVIPDTAKEKPQEGKVLAVGPGNWDEDGDKRIPLD 65
Query 63 VAEGDTVIYSKYGGTEIKYNGEEYLILSARDVLAVVSK 100
V EGD V+YSKYGGTE+KY GEEYL+LSARDVLA++ K
Sbjct 66 VKEGDIVLYSKYGGTEVKYGGEEYLVLSARDVLAIIEK 103
>gi|38233184|ref|NP_938951.1| co-chaperonin GroES [Corynebacterium diphtheriae NCTC 13129]
gi|300857836|ref|YP_003782819.1| molecular chaperon [Corynebacterium pseudotuberculosis FRC41]
gi|337290085|ref|YP_004629106.1| molecular chaperone [Corynebacterium ulcerans BR-AD22]
9 more sequence titles
Length=98
Score = 158 bits (400), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 74/100 (74%), Positives = 91/100 (91%), Gaps = 2/100 (2%)
Query 1 VAKVNIKPLEDKILVQANEAETTTASGLVIPDTAKEKPQEGTVVAVGPGRWDEDGEKRIP 60
+A VNIKPLED++LVQ +EAETTTASGLVIPD+AKEKPQEG VVA GPGR+ DG+ R+P
Sbjct 1 MANVNIKPLEDRVLVQISEAETTTASGLVIPDSAKEKPQEGVVVAAGPGRF--DGDDRVP 58
Query 61 LDVAEGDTVIYSKYGGTEIKYNGEEYLILSARDVLAVVSK 100
+D+ EGDTV++SKYGGTE+KYNGEEYL+L+ARDVLA++ K
Sbjct 59 MDIKEGDTVVFSKYGGTELKYNGEEYLLLNARDVLAIIEK 98
>gi|260579177|ref|ZP_05847067.1| chaperonin GroES [Corynebacterium jeikeium ATCC 43734]
gi|258602663|gb|EEW15950.1| chaperonin GroES [Corynebacterium jeikeium ATCC 43734]
Length=99
Score = 158 bits (400), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 76/100 (76%), Positives = 90/100 (90%), Gaps = 1/100 (1%)
Query 1 VAKVNIKPLEDKILVQANEAETTTASGLVIPDTAKEKPQEGTVVAVGPGRWDEDGEKRIP 60
+A VNIKPLED++LVQ EAETTTASGLVIPD+AKEKPQE TV+AVGPGRW +D + RIP
Sbjct 1 MANVNIKPLEDRVLVQIVEAETTTASGLVIPDSAKEKPQEATVIAVGPGRWADD-DDRIP 59
Query 61 LDVAEGDTVIYSKYGGTEIKYNGEEYLILSARDVLAVVSK 100
+DV EGDTVI+SKYGGTE+KYNGEEYL+L+ RD+LAV+ K
Sbjct 60 MDVKEGDTVIFSKYGGTELKYNGEEYLLLTQRDILAVIEK 99
>gi|317124154|ref|YP_004098266.1| chaperonin Cpn10 [Intrasporangium calvum DSM 43043]
gi|315588242|gb|ADU47539.1| Chaperonin Cpn10 [Intrasporangium calvum DSM 43043]
Length=118
Score = 157 bits (398), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 77/95 (82%), Positives = 88/95 (93%), Gaps = 0/95 (0%)
Query 4 VNIKPLEDKILVQANEAETTTASGLVIPDTAKEKPQEGTVVAVGPGRWDEDGEKRIPLDV 63
V+IKPLED+I+V++ EAE TTASGLVIPDTAKEKPQEG V+AVGPGRW+EDG++R+PLDV
Sbjct 23 VSIKPLEDRIVVKSLEAEQTTASGLVIPDTAKEKPQEGEVLAVGPGRWNEDGDQRVPLDV 82
Query 64 AEGDTVIYSKYGGTEIKYNGEEYLILSARDVLAVV 98
GD VIYSKYGGTE+KY GEEYLILSARDVLAVV
Sbjct 83 KVGDKVIYSKYGGTEVKYGGEEYLILSARDVLAVV 117
>gi|68536819|ref|YP_251524.1| co-chaperonin GroES [Corynebacterium jeikeium K411]
gi|123775667|sp|Q4JTF1.1|CH10_CORJK RecName: Full=10 kDa chaperonin; AltName: Full=GroES protein;
AltName: Full=Protein Cpn10
gi|68264418|emb|CAI37906.1| molecular chaperone protein [Corynebacterium jeikeium K411]
Length=99
Score = 157 bits (398), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 75/100 (75%), Positives = 90/100 (90%), Gaps = 1/100 (1%)
Query 1 VAKVNIKPLEDKILVQANEAETTTASGLVIPDTAKEKPQEGTVVAVGPGRWDEDGEKRIP 60
+A VNIKPLED++LVQ EAETTTASGLVIPD+AKEKPQE TV+AVGPGRW +D + RIP
Sbjct 1 MANVNIKPLEDRVLVQIVEAETTTASGLVIPDSAKEKPQEATVIAVGPGRWADD-DDRIP 59
Query 61 LDVAEGDTVIYSKYGGTEIKYNGEEYLILSARDVLAVVSK 100
+DV EGDTV++SKYGGTE+KYNGEEYL+L+ RD+LAV+ K
Sbjct 60 MDVKEGDTVVFSKYGGTELKYNGEEYLLLTQRDILAVIEK 99
>gi|256380530|ref|YP_003104190.1| chaperonin Cpn10 [Actinosynnema mirum DSM 43827]
gi|255924833|gb|ACU40344.1| chaperonin Cpn10 [Actinosynnema mirum DSM 43827]
Length=97
Score = 157 bits (397), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 79/96 (83%), Positives = 89/96 (93%), Gaps = 1/96 (1%)
Query 4 VNIKPLEDKILVQANEAETTTASGLVIPDTAKEKPQEGTVVAVGPGRWDEDGEKRIPLDV 63
VNIKPLEDKI+VQA+EAETTTASGLVIPDTAKEKPQEG V+AVGPGR D+ G RIP+DV
Sbjct 3 VNIKPLEDKIVVQASEAETTTASGLVIPDTAKEKPQEGKVLAVGPGRIDDKG-NRIPVDV 61
Query 64 AEGDTVIYSKYGGTEIKYNGEEYLILSARDVLAVVS 99
A GD V+YSKYGGTE+KYNGEEYLILS+RDVLAV++
Sbjct 62 AVGDVVLYSKYGGTEVKYNGEEYLILSSRDVLAVIN 97
>gi|213965031|ref|ZP_03393230.1| chaperonin GroS [Corynebacterium amycolatum SK46]
gi|213952567|gb|EEB63950.1| chaperonin GroS [Corynebacterium amycolatum SK46]
Length=99
Score = 157 bits (397), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 75/98 (77%), Positives = 88/98 (90%), Gaps = 1/98 (1%)
Query 1 VAKVNIKPLEDKILVQANEAETTTASGLVIPDTAKEKPQEGTVVAVGPGRWDEDGEKRIP 60
+A VNIKPLED++LVQ NEAETTTASGLVIPD+AKEKPQE TV+AVGPGRW +D + RIP
Sbjct 1 MANVNIKPLEDRVLVQINEAETTTASGLVIPDSAKEKPQEATVIAVGPGRWADD-DDRIP 59
Query 61 LDVAEGDTVIYSKYGGTEIKYNGEEYLILSARDVLAVV 98
+DV EGD VI+SKYGGTE+KY GEEYL+LS RD+LAV+
Sbjct 60 MDVKEGDIVIFSKYGGTELKYQGEEYLLLSQRDILAVI 97
>gi|145596353|ref|YP_001160650.1| chaperonin Cpn10 [Salinispora tropica CNB-440]
gi|302869875|ref|YP_003838512.1| chaperonin Cpn10 [Micromonospora aurantiaca ATCC 27029]
gi|315501337|ref|YP_004080224.1| chaperonin cpn10 [Micromonospora sp. L5]
gi|145305690|gb|ABP56272.1| chaperonin Cpn10 [Salinispora tropica CNB-440]
gi|302572734|gb|ADL48936.1| Chaperonin Cpn10 [Micromonospora aurantiaca ATCC 27029]
gi|315407956|gb|ADU06073.1| Chaperonin Cpn10 [Micromonospora sp. L5]
Length=102
Score = 157 bits (396), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 78/98 (80%), Positives = 89/98 (91%), Gaps = 1/98 (1%)
Query 3 KVNIKPLEDKILVQANEAETTTASGLVIPDTAKEKPQEGTVVAVGPGRWDEDGEKRIPLD 62
KV IKPLED+I+VQANEAETTTASG+VIPDTAKEKPQEGTV+AVGPGR D+ G R+P+D
Sbjct 6 KVAIKPLEDRIVVQANEAETTTASGIVIPDTAKEKPQEGTVLAVGPGRIDDKG-NRVPID 64
Query 63 VAEGDTVIYSKYGGTEIKYNGEEYLILSARDVLAVVSK 100
V GDTV+YSKYGGTE+KY GEEYL+LSARDVLAV+ K
Sbjct 65 VKVGDTVLYSKYGGTEVKYAGEEYLVLSARDVLAVIEK 102
>gi|159039751|ref|YP_001539004.1| chaperonin Cpn10 [Salinispora arenicola CNS-205]
gi|157918586|gb|ABW00014.1| chaperonin Cpn10 [Salinispora arenicola CNS-205]
Length=104
Score = 156 bits (395), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 78/98 (80%), Positives = 89/98 (91%), Gaps = 1/98 (1%)
Query 3 KVNIKPLEDKILVQANEAETTTASGLVIPDTAKEKPQEGTVVAVGPGRWDEDGEKRIPLD 62
KV IKPLED+I+VQANEAETTTASG+VIPDTAKEKPQEGTV+AVGPGR D+ G R+P+D
Sbjct 8 KVAIKPLEDRIVVQANEAETTTASGIVIPDTAKEKPQEGTVLAVGPGRIDDKG-NRVPID 66
Query 63 VAEGDTVIYSKYGGTEIKYNGEEYLILSARDVLAVVSK 100
V GDTV+YSKYGGTE+KY GEEYL+LSARDVLAV+ K
Sbjct 67 VKIGDTVLYSKYGGTEVKYAGEEYLVLSARDVLAVIEK 104
>gi|343928272|ref|ZP_08767725.1| 10 kDa chaperonin [Gordonia alkanivorans NBRC 16433]
gi|343761802|dbj|GAA14651.1| 10 kDa chaperonin [Gordonia alkanivorans NBRC 16433]
Length=96
Score = 156 bits (395), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 81/97 (84%), Positives = 87/97 (90%), Gaps = 1/97 (1%)
Query 4 VNIKPLEDKILVQANEAETTTASGLVIPDTAKEKPQEGTVVAVGPGRWDEDGEKRIPLDV 63
+NIKPLEDKILVQA EAETTTASGLVIPD+AKEKPQEGTV+AVG GR E G R+P+DV
Sbjct 1 MNIKPLEDKILVQAVEAETTTASGLVIPDSAKEKPQEGTVIAVGEGRVTEQG-NRVPVDV 59
Query 64 AEGDTVIYSKYGGTEIKYNGEEYLILSARDVLAVVSK 100
EGDTVIYSKYGGTEIKY GEEYLILSARDVLAV+ K
Sbjct 60 KEGDTVIYSKYGGTEIKYAGEEYLILSARDVLAVIGK 96
>gi|134103145|ref|YP_001108806.1| 10 kD chaperonin cpn10 [Saccharopolyspora erythraea NRRL 2338]
gi|291003911|ref|ZP_06561884.1| co-chaperonin GroES [Saccharopolyspora erythraea NRRL 2338]
gi|133915768|emb|CAM05881.1| 10 kD chaperonin cpn10 [Saccharopolyspora erythraea NRRL 2338]
Length=96
Score = 155 bits (393), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 79/95 (84%), Positives = 88/95 (93%), Gaps = 1/95 (1%)
Query 5 NIKPLEDKILVQANEAETTTASGLVIPDTAKEKPQEGTVVAVGPGRWDEDGEKRIPLDVA 64
+IKPLEDKI+VQA+EAETTTASG+VIPDTAKEKPQEG V+AVGPGR D+ G RIP+DV
Sbjct 3 SIKPLEDKIVVQASEAETTTASGIVIPDTAKEKPQEGKVLAVGPGRVDDKG-TRIPVDVK 61
Query 65 EGDTVIYSKYGGTEIKYNGEEYLILSARDVLAVVS 99
EGD VIYSKYGGTE+KYNGEEYLILSARDVLAVV+
Sbjct 62 EGDVVIYSKYGGTEVKYNGEEYLILSARDVLAVVN 96
>gi|319950732|ref|ZP_08024628.1| co-chaperonin GroES [Dietzia cinnamea P4]
gi|319435610|gb|EFV90834.1| co-chaperonin GroES [Dietzia cinnamea P4]
Length=95
Score = 155 bits (393), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 79/95 (84%), Positives = 88/95 (93%), Gaps = 1/95 (1%)
Query 4 VNIKPLEDKILVQANEAETTTASGLVIPDTAKEKPQEGTVVAVGPGRWDEDGEKRIPLDV 63
+ IKPLEDKILV+A EAETTTASGLVIPDTAKEKPQEGTVVAVG GR+DEDG+ RIP+D+
Sbjct 1 MAIKPLEDKILVEAIEAETTTASGLVIPDTAKEKPQEGTVVAVGKGRFDEDGD-RIPMDI 59
Query 64 AEGDTVIYSKYGGTEIKYNGEEYLILSARDVLAVV 98
EGD VIYSKYGGTEIKY G+EYLILS+RDVLAV+
Sbjct 60 KEGDKVIYSKYGGTEIKYEGKEYLILSSRDVLAVI 94
Lambda K H
0.308 0.132 0.362
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 129239199826
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40