BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv3423c Length=408 Score E Sequences producing significant alignments: (Bits) Value gi|15610559|ref|NP_217940.1| alanine racemase [Mycobacterium tub... 820 0.0 gi|61218413|sp|P0A4X2.1|ALR_MYCTU RecName: Full=Alanine racemase... 773 0.0 gi|75765474|pdb|1XFC|A Chain A, The 1.9 A Crystal Structure Of A... 770 0.0 gi|340628401|ref|YP_004746853.1| alanine racemase ALR [Mycobacte... 763 0.0 gi|308406153|ref|ZP_07495313.2| alanine racemase alr [Mycobacter... 743 0.0 gi|308232460|ref|ZP_07664093.1| alanine racemase alr [Mycobacter... 696 0.0 gi|118616650|ref|YP_904982.1| alanine racemase [Mycobacterium ul... 657 0.0 gi|183981139|ref|YP_001849430.1| alanine racemase, Alr [Mycobact... 656 0.0 gi|240167811|ref|ZP_04746470.1| alanine racemase [Mycobacterium ... 646 0.0 gi|15827104|ref|NP_301367.1| alanine racemase [Mycobacterium lep... 637 2e-180 gi|254823094|ref|ZP_05228095.1| alanine racemase [Mycobacterium ... 629 2e-178 gi|6708455|gb|AAF25943.1|AF214487_1 alanine racemase [Mycobacter... 628 7e-178 gi|118465728|ref|YP_883507.1| alanine racemase [Mycobacterium av... 627 1e-177 gi|254776802|ref|ZP_05218318.1| alanine racemase [Mycobacterium ... 625 3e-177 gi|41410356|ref|NP_963192.1| alanine racemase [Mycobacterium avi... 625 4e-177 gi|342861895|ref|ZP_08718540.1| alanine racemase [Mycobacterium ... 624 7e-177 gi|336460735|gb|EGO39624.1| alanine racemase [Mycobacterium aviu... 624 9e-177 gi|296168767|ref|ZP_06850456.1| D-alanine racemase [Mycobacteriu... 617 1e-174 gi|254552529|ref|ZP_05142976.1| alanine racemase [Mycobacterium ... 551 8e-155 gi|333991883|ref|YP_004524497.1| alanine racemase Alr [Mycobacte... 543 2e-152 gi|108798118|ref|YP_638315.1| alanine racemase [Mycobacterium sp... 540 1e-151 gi|120402493|ref|YP_952322.1| alanine racemase [Mycobacterium va... 506 2e-141 gi|145225510|ref|YP_001136188.1| alanine racemase [Mycobacterium... 504 7e-141 gi|315445863|ref|YP_004078742.1| alanine racemase [Mycobacterium... 504 7e-141 gi|118472399|ref|YP_885954.1| alanine racemase [Mycobacterium sm... 472 4e-131 gi|226305403|ref|YP_002765361.1| alanine racemase [Rhodococcus e... 438 8e-121 gi|229489364|ref|ZP_04383227.1| alanine racemase [Rhodococcus er... 437 1e-120 gi|169630818|ref|YP_001704467.1| alanine racemase [Mycobacterium... 437 2e-120 gi|111023143|ref|YP_706115.1| alanine racemase [Rhodococcus jost... 415 8e-114 gi|54022846|ref|YP_117088.1| alanine racemase [Nocardia farcinic... 409 5e-112 gi|226365649|ref|YP_002783432.1| alanine racemase [Rhodococcus o... 400 1e-109 gi|325675498|ref|ZP_08155182.1| D-alanine racemase [Rhodococcus ... 399 6e-109 gi|312140864|ref|YP_004008200.1| alanine racemase [Rhodococcus e... 396 3e-108 gi|333921697|ref|YP_004495278.1| Alanine racemase [Amycolicicocc... 389 4e-106 gi|326381872|ref|ZP_08203565.1| alanine racemase [Gordonia neofe... 353 3e-95 gi|296138608|ref|YP_003645851.1| alanine racemase [Tsukamurella ... 353 4e-95 gi|343928266|ref|ZP_08767719.1| alanine racemase [Gordonia alkan... 353 4e-95 gi|296268597|ref|YP_003651229.1| alanine racemase [Thermobispora... 345 9e-93 gi|319949830|ref|ZP_08023848.1| alanine racemase [Dietzia cinnam... 342 7e-92 gi|291003863|ref|ZP_06561836.1| alanine racemase [Saccharopolysp... 339 5e-91 gi|134103194|ref|YP_001108855.1| alanine racemase [Saccharopolys... 338 1e-90 gi|331699117|ref|YP_004335356.1| Alanine racemase [Pseudonocardi... 337 2e-90 gi|317507715|ref|ZP_07965420.1| alanine racemase [Segniliparus r... 335 9e-90 gi|256380541|ref|YP_003104201.1| alanine racemase [Actinosynnema... 328 1e-87 gi|290958110|ref|YP_003489292.1| alanine racemase [Streptomyces ... 327 2e-87 gi|296392787|ref|YP_003657671.1| alanine racemase [Segniliparus ... 326 4e-87 gi|330470100|ref|YP_004407843.1| alanine racemase [Verrucosispor... 323 2e-86 gi|296130437|ref|YP_003637687.1| alanine racemase [Cellulomonas ... 323 2e-86 gi|262201658|ref|YP_003272866.1| alanine racemase [Gordonia bron... 323 4e-86 gi|297159652|gb|ADI09364.1| alanine racemase [Streptomyces bingc... 323 4e-86 >gi|15610559|ref|NP_217940.1| alanine racemase [Mycobacterium tuberculosis H37Rv] gi|15843019|ref|NP_338056.1| alanine racemase [Mycobacterium tuberculosis CDC1551] gi|31794604|ref|NP_857097.1| alanine racemase [Mycobacterium bovis AF2122/97] 53 more sequence titles Length=408 Score = 820 bits (2119), Expect = 0.0, Method: Compositional matrix adjust. Identities = 407/408 (99%), Positives = 408/408 (100%), Gaps = 0/408 (0%) Query 1 VKRFWENVGKPNDTTDGRGTTSLAMTPISQTPGLLAEAMVDLGAIEHNVRVLREHAGHAQ 60 +KRFWENVGKPNDTTDGRGTTSLAMTPISQTPGLLAEAMVDLGAIEHNVRVLREHAGHAQ Sbjct 1 MKRFWENVGKPNDTTDGRGTTSLAMTPISQTPGLLAEAMVDLGAIEHNVRVLREHAGHAQ 60 Query 61 LMAVVKADGYGHGATRVAQTALGAGAAELGVATVDEALALRADGITAPVLAWLHPPGIDF 120 LMAVVKADGYGHGATRVAQTALGAGAAELGVATVDEALALRADGITAPVLAWLHPPGIDF Sbjct 61 LMAVVKADGYGHGATRVAQTALGAGAAELGVATVDEALALRADGITAPVLAWLHPPGIDF 120 Query 121 GPALLADVQVAVSSLRQLDELLHAVRRTGRTATVTVKVDTGLNRNGVGPAQFPAMLTALR 180 GPALLADVQVAVSSLRQLDELLHAVRRTGRTATVTVKVDTGLNRNGVGPAQFPAMLTALR Sbjct 121 GPALLADVQVAVSSLRQLDELLHAVRRTGRTATVTVKVDTGLNRNGVGPAQFPAMLTALR 180 Query 181 QAMAEDAVRLRGLMSHMVYADKPDDSINDVQAQRFTAFLAQAREQGVRFEVAHLSNSSAT 240 QAMAEDAVRLRGLMSHMVYADKPDDSINDVQAQRFTAFLAQAREQGVRFEVAHLSNSSAT Sbjct 181 QAMAEDAVRLRGLMSHMVYADKPDDSINDVQAQRFTAFLAQAREQGVRFEVAHLSNSSAT 240 Query 241 MARPDLTFDLVRPGIAVYGLSPVPALGDMGLVPAMTVKCAVALVKSIRAGEGVSYGHTWI 300 MARPDLTFDLVRPGIAVYGLSPVPALGDMGLVPAMTVKCAVALVKSIRAGEGVSYGHTWI Sbjct 241 MARPDLTFDLVRPGIAVYGLSPVPALGDMGLVPAMTVKCAVALVKSIRAGEGVSYGHTWI 300 Query 301 APRDTNLALLPIGYADGVFRSLGGRLEVLINGRRCPGVGRICMDQFMVDLGPGPLDVAEG 360 APRDTNLALLPIGYADGVFRSLGGRLEVLINGRRCPGVGRICMDQFMVDLGPGPLDVAEG Sbjct 301 APRDTNLALLPIGYADGVFRSLGGRLEVLINGRRCPGVGRICMDQFMVDLGPGPLDVAEG 360 Query 361 DEAILFGPGIRGEPTAQDWADLVGTIHYEVVTSPRGRITRTYREAENR 408 DEAILFGPGIRGEPTAQDWADLVGTIHYEVVTSPRGRITRTYREAENR Sbjct 361 DEAILFGPGIRGEPTAQDWADLVGTIHYEVVTSPRGRITRTYREAENR 408 >gi|61218413|sp|P0A4X2.1|ALR_MYCTU RecName: Full=Alanine racemase gi|61218415|sp|P0A4X3.1|ALR_MYCBO RecName: Full=Alanine racemase Length=386 Score = 773 bits (1997), Expect = 0.0, Method: Compositional matrix adjust. Identities = 385/386 (99%), Positives = 386/386 (100%), Gaps = 0/386 (0%) Query 23 LAMTPISQTPGLLAEAMVDLGAIEHNVRVLREHAGHAQLMAVVKADGYGHGATRVAQTAL 82 +AMTPISQTPGLLAEAMVDLGAIEHNVRVLREHAGHAQLMAVVKADGYGHGATRVAQTAL Sbjct 1 MAMTPISQTPGLLAEAMVDLGAIEHNVRVLREHAGHAQLMAVVKADGYGHGATRVAQTAL 60 Query 83 GAGAAELGVATVDEALALRADGITAPVLAWLHPPGIDFGPALLADVQVAVSSLRQLDELL 142 GAGAAELGVATVDEALALRADGITAPVLAWLHPPGIDFGPALLADVQVAVSSLRQLDELL Sbjct 61 GAGAAELGVATVDEALALRADGITAPVLAWLHPPGIDFGPALLADVQVAVSSLRQLDELL 120 Query 143 HAVRRTGRTATVTVKVDTGLNRNGVGPAQFPAMLTALRQAMAEDAVRLRGLMSHMVYADK 202 HAVRRTGRTATVTVKVDTGLNRNGVGPAQFPAMLTALRQAMAEDAVRLRGLMSHMVYADK Sbjct 121 HAVRRTGRTATVTVKVDTGLNRNGVGPAQFPAMLTALRQAMAEDAVRLRGLMSHMVYADK 180 Query 203 PDDSINDVQAQRFTAFLAQAREQGVRFEVAHLSNSSATMARPDLTFDLVRPGIAVYGLSP 262 PDDSINDVQAQRFTAFLAQAREQGVRFEVAHLSNSSATMARPDLTFDLVRPGIAVYGLSP Sbjct 181 PDDSINDVQAQRFTAFLAQAREQGVRFEVAHLSNSSATMARPDLTFDLVRPGIAVYGLSP 240 Query 263 VPALGDMGLVPAMTVKCAVALVKSIRAGEGVSYGHTWIAPRDTNLALLPIGYADGVFRSL 322 VPALGDMGLVPAMTVKCAVALVKSIRAGEGVSYGHTWIAPRDTNLALLPIGYADGVFRSL Sbjct 241 VPALGDMGLVPAMTVKCAVALVKSIRAGEGVSYGHTWIAPRDTNLALLPIGYADGVFRSL 300 Query 323 GGRLEVLINGRRCPGVGRICMDQFMVDLGPGPLDVAEGDEAILFGPGIRGEPTAQDWADL 382 GGRLEVLINGRRCPGVGRICMDQFMVDLGPGPLDVAEGDEAILFGPGIRGEPTAQDWADL Sbjct 301 GGRLEVLINGRRCPGVGRICMDQFMVDLGPGPLDVAEGDEAILFGPGIRGEPTAQDWADL 360 Query 383 VGTIHYEVVTSPRGRITRTYREAENR 408 VGTIHYEVVTSPRGRITRTYREAENR Sbjct 361 VGTIHYEVVTSPRGRITRTYREAENR 386 >gi|75765474|pdb|1XFC|A Chain A, The 1.9 A Crystal Structure Of Alanine Racemase From Mycobacterium Tuberculosis Contains A Conserved Entryway Into The Active Site gi|75765475|pdb|1XFC|B Chain B, The 1.9 A Crystal Structure Of Alanine Racemase From Mycobacterium Tuberculosis Contains A Conserved Entryway Into The Active Site gi|5759222|gb|AAD51033.1|AF172731_1 alanine racemase [Mycobacterium tuberculosis] Length=384 Score = 770 bits (1989), Expect = 0.0, Method: Compositional matrix adjust. Identities = 384/384 (100%), Positives = 384/384 (100%), Gaps = 0/384 (0%) Query 25 MTPISQTPGLLAEAMVDLGAIEHNVRVLREHAGHAQLMAVVKADGYGHGATRVAQTALGA 84 MTPISQTPGLLAEAMVDLGAIEHNVRVLREHAGHAQLMAVVKADGYGHGATRVAQTALGA Sbjct 1 MTPISQTPGLLAEAMVDLGAIEHNVRVLREHAGHAQLMAVVKADGYGHGATRVAQTALGA 60 Query 85 GAAELGVATVDEALALRADGITAPVLAWLHPPGIDFGPALLADVQVAVSSLRQLDELLHA 144 GAAELGVATVDEALALRADGITAPVLAWLHPPGIDFGPALLADVQVAVSSLRQLDELLHA Sbjct 61 GAAELGVATVDEALALRADGITAPVLAWLHPPGIDFGPALLADVQVAVSSLRQLDELLHA 120 Query 145 VRRTGRTATVTVKVDTGLNRNGVGPAQFPAMLTALRQAMAEDAVRLRGLMSHMVYADKPD 204 VRRTGRTATVTVKVDTGLNRNGVGPAQFPAMLTALRQAMAEDAVRLRGLMSHMVYADKPD Sbjct 121 VRRTGRTATVTVKVDTGLNRNGVGPAQFPAMLTALRQAMAEDAVRLRGLMSHMVYADKPD 180 Query 205 DSINDVQAQRFTAFLAQAREQGVRFEVAHLSNSSATMARPDLTFDLVRPGIAVYGLSPVP 264 DSINDVQAQRFTAFLAQAREQGVRFEVAHLSNSSATMARPDLTFDLVRPGIAVYGLSPVP Sbjct 181 DSINDVQAQRFTAFLAQAREQGVRFEVAHLSNSSATMARPDLTFDLVRPGIAVYGLSPVP 240 Query 265 ALGDMGLVPAMTVKCAVALVKSIRAGEGVSYGHTWIAPRDTNLALLPIGYADGVFRSLGG 324 ALGDMGLVPAMTVKCAVALVKSIRAGEGVSYGHTWIAPRDTNLALLPIGYADGVFRSLGG Sbjct 241 ALGDMGLVPAMTVKCAVALVKSIRAGEGVSYGHTWIAPRDTNLALLPIGYADGVFRSLGG 300 Query 325 RLEVLINGRRCPGVGRICMDQFMVDLGPGPLDVAEGDEAILFGPGIRGEPTAQDWADLVG 384 RLEVLINGRRCPGVGRICMDQFMVDLGPGPLDVAEGDEAILFGPGIRGEPTAQDWADLVG Sbjct 301 RLEVLINGRRCPGVGRICMDQFMVDLGPGPLDVAEGDEAILFGPGIRGEPTAQDWADLVG 360 Query 385 TIHYEVVTSPRGRITRTYREAENR 408 TIHYEVVTSPRGRITRTYREAENR Sbjct 361 TIHYEVVTSPRGRITRTYREAENR 384 >gi|340628401|ref|YP_004746853.1| alanine racemase ALR [Mycobacterium canettii CIPT 140010059] gi|340006591|emb|CCC45778.1| alanine racemase ALR [Mycobacterium canettii CIPT 140010059] Length=386 Score = 763 bits (1970), Expect = 0.0, Method: Compositional matrix adjust. Identities = 381/386 (99%), Positives = 383/386 (99%), Gaps = 0/386 (0%) Query 23 LAMTPISQTPGLLAEAMVDLGAIEHNVRVLREHAGHAQLMAVVKADGYGHGATRVAQTAL 82 +AMTPISQTPGLLAEAMVDLGAIEHNVRVLREHAGHAQLMAVVKADGYGHGATRVAQTAL Sbjct 1 MAMTPISQTPGLLAEAMVDLGAIEHNVRVLREHAGHAQLMAVVKADGYGHGATRVAQTAL 60 Query 83 GAGAAELGVATVDEALALRADGITAPVLAWLHPPGIDFGPALLADVQVAVSSLRQLDELL 142 GAGAAELGVATVDEALALR GITAPVLAWLHPPGIDFGPALLADVQVAVSSLRQLDELL Sbjct 61 GAGAAELGVATVDEALALRGGGITAPVLAWLHPPGIDFGPALLADVQVAVSSLRQLDELL 120 Query 143 HAVRRTGRTATVTVKVDTGLNRNGVGPAQFPAMLTALRQAMAEDAVRLRGLMSHMVYADK 202 AVRRTGRTATVTVKVDTGLNRNGVGPAQFPAMLTALRQAMAEDAVRLRGLMSHMVYADK Sbjct 121 DAVRRTGRTATVTVKVDTGLNRNGVGPAQFPAMLTALRQAMAEDAVRLRGLMSHMVYADK 180 Query 203 PDDSINDVQAQRFTAFLAQAREQGVRFEVAHLSNSSATMARPDLTFDLVRPGIAVYGLSP 262 PDDSIN+VQAQRFTAFLAQAREQGVRFEVAHLSNSSATMARPDLTFDLVRPGIAVYGLSP Sbjct 181 PDDSINNVQAQRFTAFLAQAREQGVRFEVAHLSNSSATMARPDLTFDLVRPGIAVYGLSP 240 Query 263 VPALGDMGLVPAMTVKCAVALVKSIRAGEGVSYGHTWIAPRDTNLALLPIGYADGVFRSL 322 VPALGDMGLVPAMTVKCAVALVKSIRAGEGVSYGHTWIAPRDTNLALLPIGYADGVFRSL Sbjct 241 VPALGDMGLVPAMTVKCAVALVKSIRAGEGVSYGHTWIAPRDTNLALLPIGYADGVFRSL 300 Query 323 GGRLEVLINGRRCPGVGRICMDQFMVDLGPGPLDVAEGDEAILFGPGIRGEPTAQDWADL 382 GGRLEVLINGRRCPGVGRICMDQFMVDLGPGPLDVAEGDEAILFGPGIRGEPTAQDWADL Sbjct 301 GGRLEVLINGRRCPGVGRICMDQFMVDLGPGPLDVAEGDEAILFGPGIRGEPTAQDWADL 360 Query 383 VGTIHYEVVTSPRGRITRTYREAENR 408 VGTIHYEVVTSPRGRITRTYREAENR Sbjct 361 VGTIHYEVVTSPRGRITRTYREAENR 386 >gi|308406153|ref|ZP_07495313.2| alanine racemase alr [Mycobacterium tuberculosis SUMu012] gi|308364367|gb|EFP53218.1| alanine racemase alr [Mycobacterium tuberculosis SUMu012] Length=370 Score = 743 bits (1918), Expect = 0.0, Method: Compositional matrix adjust. Identities = 370/370 (100%), Positives = 370/370 (100%), Gaps = 0/370 (0%) Query 39 MVDLGAIEHNVRVLREHAGHAQLMAVVKADGYGHGATRVAQTALGAGAAELGVATVDEAL 98 MVDLGAIEHNVRVLREHAGHAQLMAVVKADGYGHGATRVAQTALGAGAAELGVATVDEAL Sbjct 1 MVDLGAIEHNVRVLREHAGHAQLMAVVKADGYGHGATRVAQTALGAGAAELGVATVDEAL 60 Query 99 ALRADGITAPVLAWLHPPGIDFGPALLADVQVAVSSLRQLDELLHAVRRTGRTATVTVKV 158 ALRADGITAPVLAWLHPPGIDFGPALLADVQVAVSSLRQLDELLHAVRRTGRTATVTVKV Sbjct 61 ALRADGITAPVLAWLHPPGIDFGPALLADVQVAVSSLRQLDELLHAVRRTGRTATVTVKV 120 Query 159 DTGLNRNGVGPAQFPAMLTALRQAMAEDAVRLRGLMSHMVYADKPDDSINDVQAQRFTAF 218 DTGLNRNGVGPAQFPAMLTALRQAMAEDAVRLRGLMSHMVYADKPDDSINDVQAQRFTAF Sbjct 121 DTGLNRNGVGPAQFPAMLTALRQAMAEDAVRLRGLMSHMVYADKPDDSINDVQAQRFTAF 180 Query 219 LAQAREQGVRFEVAHLSNSSATMARPDLTFDLVRPGIAVYGLSPVPALGDMGLVPAMTVK 278 LAQAREQGVRFEVAHLSNSSATMARPDLTFDLVRPGIAVYGLSPVPALGDMGLVPAMTVK Sbjct 181 LAQAREQGVRFEVAHLSNSSATMARPDLTFDLVRPGIAVYGLSPVPALGDMGLVPAMTVK 240 Query 279 CAVALVKSIRAGEGVSYGHTWIAPRDTNLALLPIGYADGVFRSLGGRLEVLINGRRCPGV 338 CAVALVKSIRAGEGVSYGHTWIAPRDTNLALLPIGYADGVFRSLGGRLEVLINGRRCPGV Sbjct 241 CAVALVKSIRAGEGVSYGHTWIAPRDTNLALLPIGYADGVFRSLGGRLEVLINGRRCPGV 300 Query 339 GRICMDQFMVDLGPGPLDVAEGDEAILFGPGIRGEPTAQDWADLVGTIHYEVVTSPRGRI 398 GRICMDQFMVDLGPGPLDVAEGDEAILFGPGIRGEPTAQDWADLVGTIHYEVVTSPRGRI Sbjct 301 GRICMDQFMVDLGPGPLDVAEGDEAILFGPGIRGEPTAQDWADLVGTIHYEVVTSPRGRI 360 Query 399 TRTYREAENR 408 TRTYREAENR Sbjct 361 TRTYREAENR 370 >gi|308232460|ref|ZP_07664093.1| alanine racemase alr [Mycobacterium tuberculosis SUMu001] gi|308370262|ref|ZP_07420828.2| alanine racemase alr [Mycobacterium tuberculosis SUMu002] gi|308371343|ref|ZP_07424633.2| alanine racemase alr [Mycobacterium tuberculosis SUMu003] 19 more sequence titles Length=347 Score = 696 bits (1797), Expect = 0.0, Method: Compositional matrix adjust. Identities = 347/347 (100%), Positives = 347/347 (100%), Gaps = 0/347 (0%) Query 62 MAVVKADGYGHGATRVAQTALGAGAAELGVATVDEALALRADGITAPVLAWLHPPGIDFG 121 MAVVKADGYGHGATRVAQTALGAGAAELGVATVDEALALRADGITAPVLAWLHPPGIDFG Sbjct 1 MAVVKADGYGHGATRVAQTALGAGAAELGVATVDEALALRADGITAPVLAWLHPPGIDFG 60 Query 122 PALLADVQVAVSSLRQLDELLHAVRRTGRTATVTVKVDTGLNRNGVGPAQFPAMLTALRQ 181 PALLADVQVAVSSLRQLDELLHAVRRTGRTATVTVKVDTGLNRNGVGPAQFPAMLTALRQ Sbjct 61 PALLADVQVAVSSLRQLDELLHAVRRTGRTATVTVKVDTGLNRNGVGPAQFPAMLTALRQ 120 Query 182 AMAEDAVRLRGLMSHMVYADKPDDSINDVQAQRFTAFLAQAREQGVRFEVAHLSNSSATM 241 AMAEDAVRLRGLMSHMVYADKPDDSINDVQAQRFTAFLAQAREQGVRFEVAHLSNSSATM Sbjct 121 AMAEDAVRLRGLMSHMVYADKPDDSINDVQAQRFTAFLAQAREQGVRFEVAHLSNSSATM 180 Query 242 ARPDLTFDLVRPGIAVYGLSPVPALGDMGLVPAMTVKCAVALVKSIRAGEGVSYGHTWIA 301 ARPDLTFDLVRPGIAVYGLSPVPALGDMGLVPAMTVKCAVALVKSIRAGEGVSYGHTWIA Sbjct 181 ARPDLTFDLVRPGIAVYGLSPVPALGDMGLVPAMTVKCAVALVKSIRAGEGVSYGHTWIA 240 Query 302 PRDTNLALLPIGYADGVFRSLGGRLEVLINGRRCPGVGRICMDQFMVDLGPGPLDVAEGD 361 PRDTNLALLPIGYADGVFRSLGGRLEVLINGRRCPGVGRICMDQFMVDLGPGPLDVAEGD Sbjct 241 PRDTNLALLPIGYADGVFRSLGGRLEVLINGRRCPGVGRICMDQFMVDLGPGPLDVAEGD 300 Query 362 EAILFGPGIRGEPTAQDWADLVGTIHYEVVTSPRGRITRTYREAENR 408 EAILFGPGIRGEPTAQDWADLVGTIHYEVVTSPRGRITRTYREAENR Sbjct 301 EAILFGPGIRGEPTAQDWADLVGTIHYEVVTSPRGRITRTYREAENR 347 >gi|118616650|ref|YP_904982.1| alanine racemase [Mycobacterium ulcerans Agy99] gi|166969420|sp|A0PME2.1|ALR_MYCUA RecName: Full=Alanine racemase gi|118568760|gb|ABL03511.1| alanine racemase, Alr [Mycobacterium ulcerans Agy99] Length=388 Score = 657 bits (1694), Expect = 0.0, Method: Compositional matrix adjust. Identities = 322/385 (84%), Positives = 349/385 (91%), Gaps = 0/385 (0%) Query 23 LAMTPISQTPGLLAEAMVDLGAIEHNVRVLREHAGHAQLMAVVKADGYGHGATRVAQTAL 82 + TPIS TPG+LAEA+VDLGAI HNVR+LRE AG AQ+MAVVKADGYGHGAT VA+TAL Sbjct 1 MTTTPISLTPGVLAEAVVDLGAIAHNVRLLRERAGSAQVMAVVKADGYGHGATAVARTAL 60 Query 83 GAGAAELGVATVDEALALRADGITAPVLAWLHPPGIDFGPALLADVQVAVSSLRQLDELL 142 AGA ELGVA+VDEAL LRADGITAPVLAWLH PG+DFGPAL ADVQ+A+SS+RQLDE L Sbjct 61 AAGAVELGVASVDEALTLRADGITAPVLAWLHAPGMDFGPALAADVQIAISSIRQLDEAL 120 Query 143 HAVRRTGRTATVTVKVDTGLNRNGVGPAQFPAMLTALRQAMAEDAVRLRGLMSHMVYADK 202 A RRTG TATVTVK+DTGLNRNGV PA +P M+T LRQA+AEDA+RLRGLM+HMV+AD Sbjct 121 DAARRTGTTATVTVKIDTGLNRNGVAPALYPEMVTRLRQAVAEDAIRLRGLMTHMVHADA 180 Query 203 PDDSINDVQAQRFTAFLAQAREQGVRFEVAHLSNSSATMARPDLTFDLVRPGIAVYGLSP 262 P+ IND+Q+QRF L AR+QGVRFEVAHLSNSSATMARPDLT DLVRPGIAVYGLSP Sbjct 181 PEKPINDIQSQRFKQMLDHARDQGVRFEVAHLSNSSATMARPDLTLDLVRPGIAVYGLSP 240 Query 263 VPALGDMGLVPAMTVKCAVALVKSIRAGEGVSYGHTWIAPRDTNLALLPIGYADGVFRSL 322 VP LGDMGLVPAMTVKCAVALVKS+ AGEGVSYGHTWIAP DTN+ALLPIGYADGVFRSL Sbjct 241 VPRLGDMGLVPAMTVKCAVALVKSVSAGEGVSYGHTWIAPHDTNVALLPIGYADGVFRSL 300 Query 323 GGRLEVLINGRRCPGVGRICMDQFMVDLGPGPLDVAEGDEAILFGPGIRGEPTAQDWADL 382 GGRLEVLING+R PGVGR+CMDQF+VDLGPGPLDVAEGDEAILFGPG RGEPTAQDWADL Sbjct 301 GGRLEVLINGKRRPGVGRVCMDQFLVDLGPGPLDVAEGDEAILFGPGTRGEPTAQDWADL 360 Query 383 VGTIHYEVVTSPRGRITRTYREAEN 407 VGTIHYEVVTSPRGRITR YREAE Sbjct 361 VGTIHYEVVTSPRGRITRVYREAET 385 >gi|183981139|ref|YP_001849430.1| alanine racemase, Alr [Mycobacterium marinum M] gi|183174465|gb|ACC39575.1| alanine racemase, Alr [Mycobacterium marinum M] Length=388 Score = 656 bits (1693), Expect = 0.0, Method: Compositional matrix adjust. Identities = 321/385 (84%), Positives = 349/385 (91%), Gaps = 0/385 (0%) Query 23 LAMTPISQTPGLLAEAMVDLGAIEHNVRVLREHAGHAQLMAVVKADGYGHGATRVAQTAL 82 + TPIS TPG+LAEA+VDLGAI HNVR+LRE AG AQ+MAVVKADGYGHGAT VA+TAL Sbjct 1 MTTTPISLTPGVLAEAVVDLGAIAHNVRLLRERAGSAQVMAVVKADGYGHGATAVARTAL 60 Query 83 GAGAAELGVATVDEALALRADGITAPVLAWLHPPGIDFGPALLADVQVAVSSLRQLDELL 142 AGA ELGVA+VDEAL LRADGITAPVLAWLH PG+DFGPAL ADVQ+A+SS+RQLDE+L Sbjct 61 AAGAVELGVASVDEALTLRADGITAPVLAWLHAPGMDFGPALAADVQIAISSIRQLDEVL 120 Query 143 HAVRRTGRTATVTVKVDTGLNRNGVGPAQFPAMLTALRQAMAEDAVRLRGLMSHMVYADK 202 A RRTG TATVTVK+DTGLNRNGV PA +P M+T LRQA+AEDA+RLRGLM+HMV+AD Sbjct 121 DAARRTGTTATVTVKIDTGLNRNGVAPALYPEMVTRLRQAVAEDAIRLRGLMTHMVHADA 180 Query 203 PDDSINDVQAQRFTAFLAQAREQGVRFEVAHLSNSSATMARPDLTFDLVRPGIAVYGLSP 262 P+ IND+Q+QRF AR+QGVRFEVAHLSNSSATMARPDLT DLVRPGIAVYGLSP Sbjct 181 PEKPINDIQSQRFKQMFDHARDQGVRFEVAHLSNSSATMARPDLTLDLVRPGIAVYGLSP 240 Query 263 VPALGDMGLVPAMTVKCAVALVKSIRAGEGVSYGHTWIAPRDTNLALLPIGYADGVFRSL 322 VP LGDMGLVPAMTVKCAVALVKS+ AGEGVSYGHTWIAP DTN+ALLPIGYADGVFRSL Sbjct 241 VPRLGDMGLVPAMTVKCAVALVKSVSAGEGVSYGHTWIAPHDTNVALLPIGYADGVFRSL 300 Query 323 GGRLEVLINGRRCPGVGRICMDQFMVDLGPGPLDVAEGDEAILFGPGIRGEPTAQDWADL 382 GGRLEVLING+R PGVGR+CMDQF+VDLGPGPLDVAEGDEAILFGPG RGEPTAQDWADL Sbjct 301 GGRLEVLINGKRRPGVGRVCMDQFLVDLGPGPLDVAEGDEAILFGPGTRGEPTAQDWADL 360 Query 383 VGTIHYEVVTSPRGRITRTYREAEN 407 VGTIHYEVVTSPRGRITR YREAE Sbjct 361 VGTIHYEVVTSPRGRITRVYREAET 385 >gi|240167811|ref|ZP_04746470.1| alanine racemase [Mycobacterium kansasii ATCC 12478] Length=392 Score = 646 bits (1667), Expect = 0.0, Method: Compositional matrix adjust. Identities = 329/385 (86%), Positives = 353/385 (92%), Gaps = 0/385 (0%) Query 23 LAMTPISQTPGLLAEAMVDLGAIEHNVRVLREHAGHAQLMAVVKADGYGHGATRVAQTAL 82 +A+TPIS+TPG+LAEA+VDLGA+EHNVRVLREHAG AQ+MAVVKADGYGHGATRVAQ AL Sbjct 1 MAVTPISRTPGVLAEAVVDLGAVEHNVRVLREHAGSAQVMAVVKADGYGHGATRVAQAAL 60 Query 83 GAGAAELGVATVDEALALRADGITAPVLAWLHPPGIDFGPALLADVQVAVSSLRQLDELL 142 AGAAELGVATVDEALALRADGITAPVLAWLHPPGIDFGPAL+ADV++AVSS RQLDELL Sbjct 61 AAGAAELGVATVDEALALRADGITAPVLAWLHPPGIDFGPALVADVEIAVSSTRQLDELL 120 Query 143 HAVRRTGRTATVTVKVDTGLNRNGVGPAQFPAMLTALRQAMAEDAVRLRGLMSHMVYADK 202 AV RTGRTATV+VKVDTGLNRNGV PA +P ML LRQA AE A+RLRGLMSH+VYAD Sbjct 121 DAVARTGRTATVSVKVDTGLNRNGVPPALYPEMLARLRQAAAEHAIRLRGLMSHLVYADA 180 Query 203 PDDSINDVQAQRFTAFLAQAREQGVRFEVAHLSNSSATMARPDLTFDLVRPGIAVYGLSP 262 P IND+QAQRF L+ ARE+GV FEVAHLSNSSATMARPDLT DLVRPGIAVYGLSP Sbjct 181 PQQPINDIQAQRFRDMLSYAREEGVTFEVAHLSNSSATMARPDLTLDLVRPGIAVYGLSP 240 Query 263 VPALGDMGLVPAMTVKCAVALVKSIRAGEGVSYGHTWIAPRDTNLALLPIGYADGVFRSL 322 VP G+MGLVPAMTVKCAVAL+KS+ AGEGVSYGHTWIAP DT +ALLPIGYADGVFRSL Sbjct 241 VPERGEMGLVPAMTVKCAVALIKSVPAGEGVSYGHTWIAPHDTTVALLPIGYADGVFRSL 300 Query 323 GGRLEVLINGRRCPGVGRICMDQFMVDLGPGPLDVAEGDEAILFGPGIRGEPTAQDWADL 382 GGRLEVLINGRR PGVGRICMDQF+VDLGPGP+DVAEGDEAILFGPG RGEPTAQDWADL Sbjct 301 GGRLEVLINGRRRPGVGRICMDQFVVDLGPGPVDVAEGDEAILFGPGARGEPTAQDWADL 360 Query 383 VGTIHYEVVTSPRGRITRTYREAEN 407 VGTIHYEVVTSPRGRI+RTY EAE Sbjct 361 VGTIHYEVVTSPRGRISRTYLEAET 385 >gi|15827104|ref|NP_301367.1| alanine racemase [Mycobacterium leprae TN] gi|221229582|ref|YP_002502998.1| alanine racemase [Mycobacterium leprae Br4923] gi|584747|sp|P38056.1|ALR_MYCLE RecName: Full=Alanine racemase gi|467127|gb|AAA17309.1| alr [Mycobacterium leprae] gi|13092652|emb|CAC29883.1| putative alanine racemase [Mycobacterium leprae] gi|219932689|emb|CAR70468.1| putative alanine racemase [Mycobacterium leprae Br4923] Length=388 Score = 637 bits (1642), Expect = 2e-180, Method: Compositional matrix adjust. Identities = 324/385 (85%), Positives = 356/385 (93%), Gaps = 0/385 (0%) Query 23 LAMTPISQTPGLLAEAMVDLGAIEHNVRVLREHAGHAQLMAVVKADGYGHGATRVAQTAL 82 +A+TPIS PG+LAEA+VDLGAI++NVRVLREHAG AQLM V+KAD YGHGAT+VA AL Sbjct 1 MAVTPISLRPGVLAEAVVDLGAIDYNVRVLREHAGMAQLMVVLKADAYGHGATQVALAAL 60 Query 83 GAGAAELGVATVDEALALRADGITAPVLAWLHPPGIDFGPALLADVQVAVSSLRQLDELL 142 AGAAELGVATVDEALALRADGI+APVLAWLHPPGIDFGPALLADVQ+AVSS+RQLDELL Sbjct 61 AAGAAELGVATVDEALALRADGISAPVLAWLHPPGIDFGPALLADVQIAVSSVRQLDELL 120 Query 143 HAVRRTGRTATVTVKVDTGLNRNGVGPAQFPAMLTALRQAMAEDAVRLRGLMSHMVYADK 202 AVRRTGRTATVTVK DTGLNRNGV Q+PAMLTAL++A+ EDAVRLRGLMSH+VYAD+ Sbjct 121 DAVRRTGRTATVTVKADTGLNRNGVVTDQYPAMLTALQRAVVEDAVRLRGLMSHLVYADQ 180 Query 203 PDDSINDVQAQRFTAFLAQAREQGVRFEVAHLSNSSATMARPDLTFDLVRPGIAVYGLSP 262 PD+ NDVQ +RF A LAQA EQG+RFEVAHLSNSSATM+RPDL +DLVRPGIAVYGLSP Sbjct 181 PDNPSNDVQGKRFAALLAQAHEQGLRFEVAHLSNSSATMSRPDLAYDLVRPGIAVYGLSP 240 Query 263 VPALGDMGLVPAMTVKCAVALVKSIRAGEGVSYGHTWIAPRDTNLALLPIGYADGVFRSL 322 VP+ GDMGL+PAMTVKCAVA+VKSIRAGEGVSYGH WIA DTNLALLP+GYADGVFRSL Sbjct 241 VPSRGDMGLIPAMTVKCAVAMVKSIRAGEGVSYGHDWIAQHDTNLALLPVGYADGVFRSL 300 Query 323 GGRLEVLINGRRCPGVGRICMDQFMVDLGPGPLDVAEGDEAILFGPGIRGEPTAQDWADL 382 GGRL+VLING+R PGVGRICMDQF+VDLGPGP+DVAEGDEAILFGPG RGEPTAQDWADL Sbjct 301 GGRLDVLINGKRRPGVGRICMDQFVVDLGPGPIDVAEGDEAILFGPGARGEPTAQDWADL 360 Query 383 VGTIHYEVVTSPRGRITRTYREAEN 407 +GTIHYEVVTS RGRITRTYREA+ Sbjct 361 LGTIHYEVVTSLRGRITRTYREAQT 385 >gi|254823094|ref|ZP_05228095.1| alanine racemase [Mycobacterium intracellulare ATCC 13950] Length=391 Score = 629 bits (1623), Expect = 2e-178, Method: Compositional matrix adjust. Identities = 322/387 (84%), Positives = 347/387 (90%), Gaps = 0/387 (0%) Query 21 TSLAMTPISQTPGLLAEAMVDLGAIEHNVRVLREHAGHAQLMAVVKADGYGHGATRVAQT 80 T A TPIS TPGLLAEA+VDLGAI HNVR+L E AG AQ+MAVVKADGYGHGA + A+ Sbjct 2 TGRAATPISLTPGLLAEALVDLGAIAHNVRLLCEQAGGAQVMAVVKADGYGHGAAQTARA 61 Query 81 ALGAGAAELGVATVDEALALRADGITAPVLAWLHPPGIDFGPALLADVQVAVSSLRQLDE 140 AL AGAAELGVATVDEALALRADG+ APVLAWLHPPG DFGPALLADVQ+AVSS RQLDE Sbjct 62 ALAAGAAELGVATVDEALALRADGVRAPVLAWLHPPGFDFGPALLADVQIAVSSERQLDE 121 Query 141 LLHAVRRTGRTATVTVKVDTGLNRNGVGPAQFPAMLTALRQAMAEDAVRLRGLMSHMVYA 200 LL AVRRTGRTATVTVKVDTGLNRNGV P +P+MLTALR+A+AE+A+ LRGLMSHMVYA Sbjct 122 LLDAVRRTGRTATVTVKVDTGLNRNGVPPEHYPSMLTALRRAVAENAIVLRGLMSHMVYA 181 Query 201 DKPDDSINDVQAQRFTAFLAQAREQGVRFEVAHLSNSSATMARPDLTFDLVRPGIAVYGL 260 D+P + +ND+QAQRFT LAQAR+QGVR+E AHLSNSSATM+RPDL FD+VRPGIAVYGL Sbjct 182 DQPANPVNDLQAQRFTEMLAQARDQGVRYEAAHLSNSSATMSRPDLAFDMVRPGIAVYGL 241 Query 261 SPVPALGDMGLVPAMTVKCAVALVKSIRAGEGVSYGHTWIAPRDTNLALLPIGYADGVFR 320 SPVP GDMGL+PAMTVKC VALVKSIRAGE VSYGHTW A RDT LALLP+GYADGVFR Sbjct 242 SPVPERGDMGLIPAMTVKCPVALVKSIRAGESVSYGHTWTARRDTTLALLPVGYADGVFR 301 Query 321 SLGGRLEVLINGRRCPGVGRICMDQFMVDLGPGPLDVAEGDEAILFGPGIRGEPTAQDWA 380 SLG RLEVLINGRR PGVGRICMDQF+VDLGPGP DVAEGDEAILFGPG GEPTAQDWA Sbjct 302 SLGNRLEVLINGRRRPGVGRICMDQFVVDLGPGPTDVAEGDEAILFGPGASGEPTAQDWA 361 Query 381 DLVGTIHYEVVTSPRGRITRTYREAEN 407 DL+GTIHYEVVTSPRGRITRTYREA Sbjct 362 DLLGTIHYEVVTSPRGRITRTYREART 388 >gi|6708455|gb|AAF25943.1|AF214487_1 alanine racemase [Mycobacterium avium] Length=391 Score = 628 bits (1619), Expect = 7e-178, Method: Compositional matrix adjust. Identities = 321/386 (84%), Positives = 348/386 (91%), Gaps = 0/386 (0%) Query 22 SLAMTPISQTPGLLAEAMVDLGAIEHNVRVLREHAGHAQLMAVVKADGYGHGATRVAQTA 81 ++A+TPIS TPG+LAEA+VDLGAIEHNVR+L E A AQ+MAVVKADGYGHGA + A+ A Sbjct 3 AVAVTPISLTPGVLAEALVDLGAIEHNVRLLCEQARGAQVMAVVKADGYGHGAVQTARAA 62 Query 82 LGAGAAELGVATVDEALALRADGITAPVLAWLHPPGIDFGPALLADVQVAVSSLRQLDEL 141 L AGAAELGVATVDEALALRA GI+APVLAWLHPPGIDF PALLA VQ+ +SS RQLDEL Sbjct 63 LAAGAAELGVATVDEALALRAAGISAPVLAWLHPPGIDFRPALLAGVQIGLSSQRQLDEL 122 Query 142 LHAVRRTGRTATVTVKVDTGLNRNGVGPAQFPAMLTALRQAMAEDAVRLRGLMSHMVYAD 201 L AVR TGRTATVTVKVDTGLNRNGV PAQ+P+MLTALR+A+AE A+ RGLMSHMVYAD Sbjct 123 LTAVRDTGRTATVTVKVDTGLNRNGVPPAQYPSMLTALRRAVAEQAIVPRGLMSHMVYAD 182 Query 202 KPDDSINDVQAQRFTAFLAQAREQGVRFEVAHLSNSSATMARPDLTFDLVRPGIAVYGLS 261 +P + +NDVQAQRFT LAQAREQGVRFEVAHLSNSSATM+RPDL FD+VRPGIAVYGLS Sbjct 183 QPANPVNDVQAQRFTDMLAQAREQGVRFEVAHLSNSSATMSRPDLAFDMVRPGIAVYGLS 242 Query 262 PVPALGDMGLVPAMTVKCAVALVKSIRAGEGVSYGHTWIAPRDTNLALLPIGYADGVFRS 321 PVP LGDMGLVPAMTVKC VALVKSIRAGE VSYGHTW A RDTNLALLP+GYADG+FRS Sbjct 243 PVPELGDMGLVPAMTVKCTVALVKSIRAGESVSYGHTWTAQRDTNLALLPVGYADGIFRS 302 Query 322 LGGRLEVLINGRRCPGVGRICMDQFMVDLGPGPLDVAEGDEAILFGPGIRGEPTAQDWAD 381 LGGRL+V INGRR PGVGRICMDQF+VDLGPG DVAEGDEAILFGPG GEPTAQDWAD Sbjct 303 LGGRLQVSINGRRRPGVGRICMDQFVVDLGPGRPDVAEGDEAILFGPGSNGEPTAQDWAD 362 Query 382 LVGTIHYEVVTSPRGRITRTYREAEN 407 L+GTIHYEVVTSPRGRITRTYREA Sbjct 363 LLGTIHYEVVTSPRGRITRTYREAHT 388 >gi|118465728|ref|YP_883507.1| alanine racemase [Mycobacterium avium 104] gi|20141183|sp|Q9L888.2|ALR_MYCAV RecName: Full=Alanine racemase gi|166969418|sp|A0QKR9.1|ALR_MYCA1 RecName: Full=Alanine racemase gi|118167015|gb|ABK67912.1| alanine racemase [Mycobacterium avium 104] Length=388 Score = 627 bits (1616), Expect = 1e-177, Method: Compositional matrix adjust. Identities = 321/385 (84%), Positives = 347/385 (91%), Gaps = 0/385 (0%) Query 23 LAMTPISQTPGLLAEAMVDLGAIEHNVRVLREHAGHAQLMAVVKADGYGHGATRVAQTAL 82 +A+TPIS TPG+LAEA+VDLGAIEHNVR+L E A AQ+MAVVKADGYGHGA + A+ AL Sbjct 1 MAVTPISLTPGVLAEALVDLGAIEHNVRLLCEQARGAQVMAVVKADGYGHGAVQTARAAL 60 Query 83 GAGAAELGVATVDEALALRADGITAPVLAWLHPPGIDFGPALLADVQVAVSSLRQLDELL 142 AGAAELGVATVDEALALRA GI+APVLAWLHPPGIDF PALLA VQ+ +SS RQLDELL Sbjct 61 AAGAAELGVATVDEALALRAAGISAPVLAWLHPPGIDFRPALLAGVQIGLSSQRQLDELL 120 Query 143 HAVRRTGRTATVTVKVDTGLNRNGVGPAQFPAMLTALRQAMAEDAVRLRGLMSHMVYADK 202 AVR TGRTATVTVKVDTGLNRNGV PAQ+P+MLTALR+A+AE A+ RGLMSHMVYAD+ Sbjct 121 TAVRDTGRTATVTVKVDTGLNRNGVPPAQYPSMLTALRRAVAEQAIVPRGLMSHMVYADQ 180 Query 203 PDDSINDVQAQRFTAFLAQAREQGVRFEVAHLSNSSATMARPDLTFDLVRPGIAVYGLSP 262 P + +NDVQAQRFT LAQAREQGVRFEVAHLSNSSATM+RPDL FD+VRPGIAVYGLSP Sbjct 181 PANPVNDVQAQRFTDMLAQAREQGVRFEVAHLSNSSATMSRPDLAFDMVRPGIAVYGLSP 240 Query 263 VPALGDMGLVPAMTVKCAVALVKSIRAGEGVSYGHTWIAPRDTNLALLPIGYADGVFRSL 322 VP LGDMGLVPAMTVKC VALVKSIRAGE VSYGHTW A RDTNLALLP+GYADG+FRSL Sbjct 241 VPELGDMGLVPAMTVKCTVALVKSIRAGESVSYGHTWTAQRDTNLALLPVGYADGIFRSL 300 Query 323 GGRLEVLINGRRCPGVGRICMDQFMVDLGPGPLDVAEGDEAILFGPGIRGEPTAQDWADL 382 GGRL+V INGRR PGVGRICMDQF+VDLGPG DVAEGDEAILFGPG GEPTAQDWADL Sbjct 301 GGRLQVSINGRRRPGVGRICMDQFVVDLGPGRPDVAEGDEAILFGPGSNGEPTAQDWADL 360 Query 383 VGTIHYEVVTSPRGRITRTYREAEN 407 +GTIHYEVVTSPRGRITRTYREA Sbjct 361 LGTIHYEVVTSPRGRITRTYREAHT 385 >gi|254776802|ref|ZP_05218318.1| alanine racemase [Mycobacterium avium subsp. avium ATCC 25291] Length=391 Score = 625 bits (1613), Expect = 3e-177, Method: Compositional matrix adjust. Identities = 320/386 (83%), Positives = 348/386 (91%), Gaps = 0/386 (0%) Query 22 SLAMTPISQTPGLLAEAMVDLGAIEHNVRVLREHAGHAQLMAVVKADGYGHGATRVAQTA 81 ++A+TPIS TPG+LAEA+VDLGAIEHNVR+L E A AQ+MAVVKADGYGHGA + A+ A Sbjct 3 AVAVTPISLTPGVLAEALVDLGAIEHNVRLLCEQARGAQVMAVVKADGYGHGAVQTARAA 62 Query 82 LGAGAAELGVATVDEALALRADGITAPVLAWLHPPGIDFGPALLADVQVAVSSLRQLDEL 141 L AGAAELGVATVDEALALRA GI+APVLAWLHPPGIDF PALLA VQ+ +SS RQLDEL Sbjct 63 LAAGAAELGVATVDEALALRAAGISAPVLAWLHPPGIDFRPALLAGVQIGLSSQRQLDEL 122 Query 142 LHAVRRTGRTATVTVKVDTGLNRNGVGPAQFPAMLTALRQAMAEDAVRLRGLMSHMVYAD 201 L AVR TGRTATVTVKVDTGLNRNGV PAQ+P+MLTALR+A+AE+A+ RGLMSHMVYAD Sbjct 123 LAAVRDTGRTATVTVKVDTGLNRNGVPPAQYPSMLTALRRAVAEEAIVPRGLMSHMVYAD 182 Query 202 KPDDSINDVQAQRFTAFLAQAREQGVRFEVAHLSNSSATMARPDLTFDLVRPGIAVYGLS 261 +P + +NDVQAQRFT LAQAR QGVRFEVAHLSNSSATM+RPDL FD+VRPGIAVYGLS Sbjct 183 QPANPVNDVQAQRFTDMLAQARAQGVRFEVAHLSNSSATMSRPDLAFDMVRPGIAVYGLS 242 Query 262 PVPALGDMGLVPAMTVKCAVALVKSIRAGEGVSYGHTWIAPRDTNLALLPIGYADGVFRS 321 PVP LGDMGLVPAMTVKC VALVKSIRAGE VSYGHTW A RDTNLALLP+GYADG+FRS Sbjct 243 PVPELGDMGLVPAMTVKCTVALVKSIRAGESVSYGHTWTAQRDTNLALLPVGYADGIFRS 302 Query 322 LGGRLEVLINGRRCPGVGRICMDQFMVDLGPGPLDVAEGDEAILFGPGIRGEPTAQDWAD 381 LGGRL+V INGRR PGVGRICMDQF+VDLGPG DVAEGDEAILFGPG GEPTAQDWAD Sbjct 303 LGGRLQVSINGRRRPGVGRICMDQFVVDLGPGRPDVAEGDEAILFGPGSNGEPTAQDWAD 362 Query 382 LVGTIHYEVVTSPRGRITRTYREAEN 407 L+GTIHYEVVTSPRGRITRTYREA Sbjct 363 LLGTIHYEVVTSPRGRITRTYREAHT 388 >gi|41410356|ref|NP_963192.1| alanine racemase [Mycobacterium avium subsp. paratuberculosis K-10] gi|41399190|gb|AAS06808.1| Alr [Mycobacterium avium subsp. paratuberculosis K-10] Length=391 Score = 625 bits (1612), Expect = 4e-177, Method: Compositional matrix adjust. Identities = 320/386 (83%), Positives = 348/386 (91%), Gaps = 0/386 (0%) Query 22 SLAMTPISQTPGLLAEAMVDLGAIEHNVRVLREHAGHAQLMAVVKADGYGHGATRVAQTA 81 ++A+TPIS TPG+LAEA+VDLGAIEHNVR+L E A AQ+MAVVKADGYGHGA + A+ A Sbjct 3 AVAVTPISLTPGVLAEALVDLGAIEHNVRLLCEQARGAQVMAVVKADGYGHGAVQTARAA 62 Query 82 LGAGAAELGVATVDEALALRADGITAPVLAWLHPPGIDFGPALLADVQVAVSSLRQLDEL 141 L AGAAELGVATVDEALALRA GI+APVLAWLHPPGIDF PALLA VQ+ +SS RQLDEL Sbjct 63 LAAGAAELGVATVDEALALRAAGISAPVLAWLHPPGIDFRPALLAGVQIGLSSQRQLDEL 122 Query 142 LHAVRRTGRTATVTVKVDTGLNRNGVGPAQFPAMLTALRQAMAEDAVRLRGLMSHMVYAD 201 L AVR TGRTATVTVKVDT LNRNGV PAQ+P+MLTALR+A+AE+A+ RGLMSHMVYAD Sbjct 123 LTAVRDTGRTATVTVKVDTRLNRNGVPPAQYPSMLTALRRAVAEEAIVPRGLMSHMVYAD 182 Query 202 KPDDSINDVQAQRFTAFLAQAREQGVRFEVAHLSNSSATMARPDLTFDLVRPGIAVYGLS 261 +P + +NDVQAQRFT LAQAREQGVRFEVAHLSNSSATM+RPDL FD+VRPGIAVYGLS Sbjct 183 QPANPVNDVQAQRFTDMLAQAREQGVRFEVAHLSNSSATMSRPDLAFDMVRPGIAVYGLS 242 Query 262 PVPALGDMGLVPAMTVKCAVALVKSIRAGEGVSYGHTWIAPRDTNLALLPIGYADGVFRS 321 PVP LGDMGLVPAMTVKC VALVKSIRAGE VSYGHTW A RDTNLALLP+GYADG+FRS Sbjct 243 PVPELGDMGLVPAMTVKCTVALVKSIRAGESVSYGHTWTAQRDTNLALLPVGYADGIFRS 302 Query 322 LGGRLEVLINGRRCPGVGRICMDQFMVDLGPGPLDVAEGDEAILFGPGIRGEPTAQDWAD 381 LGGRL+V INGRR PGVGRICMDQF+VDLGPG DVAEGDEAILFGPG GEPTAQDWAD Sbjct 303 LGGRLQVSINGRRRPGVGRICMDQFVVDLGPGRPDVAEGDEAILFGPGSNGEPTAQDWAD 362 Query 382 LVGTIHYEVVTSPRGRITRTYREAEN 407 L+GTIHYEVVTSPRGRITRTYREA Sbjct 363 LLGTIHYEVVTSPRGRITRTYREAHT 388 >gi|342861895|ref|ZP_08718540.1| alanine racemase [Mycobacterium colombiense CECT 3035] gi|342130712|gb|EGT84016.1| alanine racemase [Mycobacterium colombiense CECT 3035] Length=388 Score = 624 bits (1610), Expect = 7e-177, Method: Compositional matrix adjust. Identities = 316/385 (83%), Positives = 347/385 (91%), Gaps = 0/385 (0%) Query 23 LAMTPISQTPGLLAEAMVDLGAIEHNVRVLREHAGHAQLMAVVKADGYGHGATRVAQTAL 82 +A+TPIS TPG+LAEA+VDLGAIEHNVR+L E AG AQ+MAVVKADGYGHGA R A+ AL Sbjct 1 MAVTPISLTPGVLAEALVDLGAIEHNVRLLCEQAGGAQVMAVVKADGYGHGAPRTARAAL 60 Query 83 GAGAAELGVATVDEALALRADGITAPVLAWLHPPGIDFGPALLADVQVAVSSLRQLDELL 142 AGA ELGVATV E LALRA GITAPVLAWLHPPGIDFGPALLAD+Q+AVSS QLDELL Sbjct 61 AAGATELGVATVAEGLALRAAGITAPVLAWLHPPGIDFGPALLADLQIAVSSEHQLDELL 120 Query 143 HAVRRTGRTATVTVKVDTGLNRNGVGPAQFPAMLTALRQAMAEDAVRLRGLMSHMVYADK 202 A RRTGRTATVTVKVDTGLNRNGV P Q+PAMLTALR+A+AE+A+ LRGLMSHMVYAD+ Sbjct 121 DAARRTGRTATVTVKVDTGLNRNGVPPGQYPAMLTALRKAVAEEAIVLRGLMSHMVYADQ 180 Query 203 PDDSINDVQAQRFTAFLAQAREQGVRFEVAHLSNSSATMARPDLTFDLVRPGIAVYGLSP 262 P + +N++QAQRF+ LAQAREQGVRF+VAHLSNSSATM+RPDL FD+VRPG+A+YGLSP Sbjct 181 PANPVNNLQAQRFSDLLAQAREQGVRFDVAHLSNSSATMSRPDLAFDMVRPGVAIYGLSP 240 Query 263 VPALGDMGLVPAMTVKCAVALVKSIRAGEGVSYGHTWIAPRDTNLALLPIGYADGVFRSL 322 VP GDMGL+PAMTVKC VALVKSIRAGE VSYGHTW A DTNLAL+P+GYADGVFRSL Sbjct 241 VPERGDMGLIPAMTVKCTVALVKSIRAGESVSYGHTWTAQHDTNLALIPVGYADGVFRSL 300 Query 323 GGRLEVLINGRRCPGVGRICMDQFMVDLGPGPLDVAEGDEAILFGPGIRGEPTAQDWADL 382 GGRLEVLING+R PGVGRICMDQF+VDLGPG DVAEGDEAILFGPG GEPTAQDWADL Sbjct 301 GGRLEVLINGKRRPGVGRICMDQFVVDLGPGRTDVAEGDEAILFGPGASGEPTAQDWADL 360 Query 383 VGTIHYEVVTSPRGRITRTYREAEN 407 +GTIHYEVVTSPRGRITRTYREA Sbjct 361 LGTIHYEVVTSPRGRITRTYREAHT 385 >gi|336460735|gb|EGO39624.1| alanine racemase [Mycobacterium avium subsp. paratuberculosis S397] Length=391 Score = 624 bits (1609), Expect = 9e-177, Method: Compositional matrix adjust. Identities = 319/386 (83%), Positives = 348/386 (91%), Gaps = 0/386 (0%) Query 22 SLAMTPISQTPGLLAEAMVDLGAIEHNVRVLREHAGHAQLMAVVKADGYGHGATRVAQTA 81 ++A+TPIS TPG+LAEA+VDLGAIEHNVR+L E A AQ+MAVVKADGYGHGA + A+ A Sbjct 3 AVAVTPISLTPGVLAEALVDLGAIEHNVRLLCEQARGAQVMAVVKADGYGHGAVQTARAA 62 Query 82 LGAGAAELGVATVDEALALRADGITAPVLAWLHPPGIDFGPALLADVQVAVSSLRQLDEL 141 L AGAAELGVATVDEALALRA GI+APVLAWLHPPGIDF PALLA VQ+ +SS RQLDEL Sbjct 63 LAAGAAELGVATVDEALALRAAGISAPVLAWLHPPGIDFRPALLAGVQIGLSSQRQLDEL 122 Query 142 LHAVRRTGRTATVTVKVDTGLNRNGVGPAQFPAMLTALRQAMAEDAVRLRGLMSHMVYAD 201 L AVR TGRTATVTVKVDT LNRNGV PAQ+P+MLTALR+A+AE+A+ RGLMSHMVYAD Sbjct 123 LTAVRDTGRTATVTVKVDTRLNRNGVPPAQYPSMLTALRRAVAEEAIVPRGLMSHMVYAD 182 Query 202 KPDDSINDVQAQRFTAFLAQAREQGVRFEVAHLSNSSATMARPDLTFDLVRPGIAVYGLS 261 +P + +NDVQAQRFT LAQAREQGVRFEVAHLSNSSATM+RPDL FD+VRPGIAVYGLS Sbjct 183 QPANPVNDVQAQRFTDMLAQAREQGVRFEVAHLSNSSATMSRPDLAFDMVRPGIAVYGLS 242 Query 262 PVPALGDMGLVPAMTVKCAVALVKSIRAGEGVSYGHTWIAPRDTNLALLPIGYADGVFRS 321 PVP LGDMGLVPAMTVKC VALVKSIRAGE VSYGHTW A RDTNLALLP+GYADG+FRS Sbjct 243 PVPELGDMGLVPAMTVKCTVALVKSIRAGESVSYGHTWTAQRDTNLALLPVGYADGIFRS 302 Query 322 LGGRLEVLINGRRCPGVGRICMDQFMVDLGPGPLDVAEGDEAILFGPGIRGEPTAQDWAD 381 LGGRL+V INGRR PGVGRICMDQF+VDLGPG DVAEGDEAILFGPG GEPTAQDWA+ Sbjct 303 LGGRLQVSINGRRRPGVGRICMDQFVVDLGPGRPDVAEGDEAILFGPGSNGEPTAQDWAN 362 Query 382 LVGTIHYEVVTSPRGRITRTYREAEN 407 L+GTIHYEVVTSPRGRITRTYREA Sbjct 363 LLGTIHYEVVTSPRGRITRTYREAHT 388 >gi|296168767|ref|ZP_06850456.1| D-alanine racemase [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295896550|gb|EFG76194.1| D-alanine racemase [Mycobacterium parascrofulaceum ATCC BAA-614] Length=394 Score = 617 bits (1591), Expect = 1e-174, Method: Compositional matrix adjust. Identities = 318/384 (83%), Positives = 349/384 (91%), Gaps = 0/384 (0%) Query 24 AMTPISQTPGLLAEAMVDLGAIEHNVRVLREHAGHAQLMAVVKADGYGHGATRVAQTALG 83 A+TP S TPG+LAEA+VDLGAIEHNVR+LREHAG AQ+MAVVKADGYGHGAT+ A+ AL Sbjct 8 AVTPTSLTPGVLAEALVDLGAIEHNVRLLREHAGAAQVMAVVKADGYGHGATQAARAALA 67 Query 84 AGAAELGVATVDEALALRADGITAPVLAWLHPPGIDFGPALLADVQVAVSSLRQLDELLH 143 GAAELGVATV EALALRA+GITAPVLAWLHPPGIDF PALLADV++AVSS RQLDELL Sbjct 68 GGAAELGVATVAEALALRAEGITAPVLAWLHPPGIDFRPALLADVEIAVSSERQLDELLD 127 Query 144 AVRRTGRTATVTVKVDTGLNRNGVGPAQFPAMLTALRQAMAEDAVRLRGLMSHMVYADKP 203 A RRTGR ATVTVKVDTGLNRNGV PA++P+MLTALR+A+AE+A+RLRGLMSHMV+AD+P Sbjct 128 AARRTGRAATVTVKVDTGLNRNGVHPARYPSMLTALRRAVAENAIRLRGLMSHMVFADQP 187 Query 204 DDSINDVQAQRFTAFLAQAREQGVRFEVAHLSNSSATMARPDLTFDLVRPGIAVYGLSPV 263 D+ +ND+QA+RF LAQA E GVRFEVAHL+NSSATM+RPDL FDLVRPG+AVYGLSPV Sbjct 188 DNPVNDLQAKRFADMLAQAGESGVRFEVAHLANSSATMSRPDLAFDLVRPGVAVYGLSPV 247 Query 264 PALGDMGLVPAMTVKCAVALVKSIRAGEGVSYGHTWIAPRDTNLALLPIGYADGVFRSLG 323 P LG MGLVPAMTVKC VALVKSIRAGE VSYGHTW A RDT LALLP+GYADGVFRSLG Sbjct 248 PELGGMGLVPAMTVKCPVALVKSIRAGESVSYGHTWTAERDTTLALLPVGYADGVFRSLG 307 Query 324 GRLEVLINGRRCPGVGRICMDQFMVDLGPGPLDVAEGDEAILFGPGIRGEPTAQDWADLV 383 GRLEVLING+R PGVGRICMDQF+VDLGPG DVAEGDEAILFGPG GEPTAQDWAD++ Sbjct 308 GRLEVLINGKRRPGVGRICMDQFVVDLGPGRTDVAEGDEAILFGPGGSGEPTAQDWADVL 367 Query 384 GTIHYEVVTSPRGRITRTYREAEN 407 GTIHYEVVTSPRGRITRTYREA Sbjct 368 GTIHYEVVTSPRGRITRTYREART 391 >gi|254552529|ref|ZP_05142976.1| alanine racemase [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] Length=277 Score = 551 bits (1420), Expect = 8e-155, Method: Compositional matrix adjust. Identities = 277/277 (100%), Positives = 277/277 (100%), Gaps = 0/277 (0%) Query 39 MVDLGAIEHNVRVLREHAGHAQLMAVVKADGYGHGATRVAQTALGAGAAELGVATVDEAL 98 MVDLGAIEHNVRVLREHAGHAQLMAVVKADGYGHGATRVAQTALGAGAAELGVATVDEAL Sbjct 1 MVDLGAIEHNVRVLREHAGHAQLMAVVKADGYGHGATRVAQTALGAGAAELGVATVDEAL 60 Query 99 ALRADGITAPVLAWLHPPGIDFGPALLADVQVAVSSLRQLDELLHAVRRTGRTATVTVKV 158 ALRADGITAPVLAWLHPPGIDFGPALLADVQVAVSSLRQLDELLHAVRRTGRTATVTVKV Sbjct 61 ALRADGITAPVLAWLHPPGIDFGPALLADVQVAVSSLRQLDELLHAVRRTGRTATVTVKV 120 Query 159 DTGLNRNGVGPAQFPAMLTALRQAMAEDAVRLRGLMSHMVYADKPDDSINDVQAQRFTAF 218 DTGLNRNGVGPAQFPAMLTALRQAMAEDAVRLRGLMSHMVYADKPDDSINDVQAQRFTAF Sbjct 121 DTGLNRNGVGPAQFPAMLTALRQAMAEDAVRLRGLMSHMVYADKPDDSINDVQAQRFTAF 180 Query 219 LAQAREQGVRFEVAHLSNSSATMARPDLTFDLVRPGIAVYGLSPVPALGDMGLVPAMTVK 278 LAQAREQGVRFEVAHLSNSSATMARPDLTFDLVRPGIAVYGLSPVPALGDMGLVPAMTVK Sbjct 181 LAQAREQGVRFEVAHLSNSSATMARPDLTFDLVRPGIAVYGLSPVPALGDMGLVPAMTVK 240 Query 279 CAVALVKSIRAGEGVSYGHTWIAPRDTNLALLPIGYA 315 CAVALVKSIRAGEGVSYGHTWIAPRDTNLALLPIGYA Sbjct 241 CAVALVKSIRAGEGVSYGHTWIAPRDTNLALLPIGYA 277 >gi|333991883|ref|YP_004524497.1| alanine racemase Alr [Mycobacterium sp. JDM601] gi|333487851|gb|AEF37243.1| alanine racemase Alr [Mycobacterium sp. JDM601] Length=386 Score = 543 bits (1400), Expect = 2e-152, Method: Compositional matrix adjust. Identities = 276/379 (73%), Positives = 318/379 (84%), Gaps = 0/379 (0%) Query 25 MTPISQTPGLLAEAMVDLGAIEHNVRVLREHAGHAQLMAVVKADGYGHGATRVAQTALGA 84 MT S+T GLL EA+VDL AI HNVRVL + AG A++MAVVKADGYGHGA +VA+ AL A Sbjct 1 MTATSRTAGLLGEALVDLDAIAHNVRVLSDQAGAAEVMAVVKADGYGHGAAQVARAALAA 60 Query 85 GAAELGVATVDEALALRADGITAPVLAWLHPPGIDFGPALLADVQVAVSSLRQLDELLHA 144 GAAELGVATVDEALALRA GI APVLAWLH P DF PAL ADVQ+AVSS+RQLDELL A Sbjct 61 GAAELGVATVDEALALRAAGIAAPVLAWLHGPDTDFAPALTADVQIAVSSVRQLDELLDA 120 Query 145 VRRTGRTATVTVKVDTGLNRNGVGPAQFPAMLTALRQAMAEDAVRLRGLMSHMVYADKPD 204 V R+GRTATVTVK DTG+NRNG+G A +P +L ALR+A+A+DA+R+RGLMSH+ AD+ D Sbjct 121 VGRSGRTATVTVKADTGMNRNGIGAAGYPELLGALRRAVADDAIRVRGLMSHLACADEAD 180 Query 205 DSINDVQAQRFTAFLAQAREQGVRFEVAHLSNSSATMARPDLTFDLVRPGIAVYGLSPVP 264 + +N+VQAQRF+ LA AR+ G+ FEVAHL+NS+ M RPDL FD+VRPGIAVYGLSP+P Sbjct 181 NPVNNVQAQRFSDMLALARDNGLTFEVAHLANSAGVMTRPDLAFDMVRPGIAVYGLSPLP 240 Query 265 ALGDMGLVPAMTVKCAVALVKSIRAGEGVSYGHTWIAPRDTNLALLPIGYADGVFRSLGG 324 GDMGLVPAMT+K V LV+SI+AGE VSYGHTWIA DT LAL+P+GYADGVFR L G Sbjct 241 ERGDMGLVPAMTLKSIVVLVRSIKAGEAVSYGHTWIAEADTTLALVPMGYADGVFRPLSG 300 Query 325 RLEVLINGRRCPGVGRICMDQFMVDLGPGPLDVAEGDEAILFGPGIRGEPTAQDWADLVG 384 R +VLINGRR P VGR+CMDQF+VDLGPGP+DV EGDE ILFGPG GEP AQDWAD +G Sbjct 301 RFDVLINGRRRPSVGRVCMDQFVVDLGPGPVDVTEGDEVILFGPGTNGEPIAQDWADALG 360 Query 385 TIHYEVVTSPRGRITRTYR 403 TIHYEVV SPRGR+ RTYR Sbjct 361 TIHYEVVNSPRGRVARTYR 379 >gi|108798118|ref|YP_638315.1| alanine racemase [Mycobacterium sp. MCS] gi|119867214|ref|YP_937166.1| alanine racemase [Mycobacterium sp. KMS] gi|126433776|ref|YP_001069467.1| alanine racemase [Mycobacterium sp. JLS] gi|108768537|gb|ABG07259.1| alanine racemase [Mycobacterium sp. MCS] gi|119693303|gb|ABL90376.1| alanine racemase [Mycobacterium sp. KMS] gi|126233576|gb|ABN96976.1| alanine racemase [Mycobacterium sp. JLS] Length=383 Score = 540 bits (1392), Expect = 1e-151, Method: Compositional matrix adjust. Identities = 265/373 (72%), Positives = 311/373 (84%), Gaps = 1/373 (0%) Query 36 AEAMVDLGAIEHNVRVLREHAGHAQLMAVVKADGYGHGATRVAQTALGAGAAELGVATVD 95 A+ +VDL AI HNV +LR+ AG AQ+M V+KADGYGHGAT VA+ L AG ELGVATV Sbjct 12 AQVVVDLDAISHNVALLRDRAGSAQVMPVLKADGYGHGATEVAKVVLDAGVTELGVATVG 71 Query 96 EALALRADGITAPVLAWLHPPGIDFGPALLADVQVAVSSLRQLDELLHAVRRTGRTATVT 155 EALALRADGITAPVLAWLH PG DF PA+ AD+Q+AVSS+RQL E+L AV RTG TAT+T Sbjct 72 EALALRADGITAPVLAWLHGPGTDFAPAVQADIQLAVSSVRQLGEILDAVHRTGMTATLT 131 Query 156 VKVDTGLNRNGVGPAQFPAMLTALRQAMAEDAVRLRGLMSHMVYADKPDDSINDVQAQRF 215 VK DTGL+RNGV PA++PA+L L +A AEDAVR+RG+MSH+ D+PD+ ND QAQR Sbjct 132 VKADTGLSRNGVSPAEYPALLQRLAKAQAEDAVRVRGIMSHLACGDEPDNPTNDRQAQRL 191 Query 216 TAFLAQAREQGVRFEVAHLSNSSATMARPDLTFDLVRPGIAVYGLSPVPALGDMGLVPAM 275 T QA + GV FEVAHL NS A M RPDL FD+VRPGIAVYG +P+PALGDMGL PAM Sbjct 192 TDMRRQAADAGVTFEVAHLCNSPAAMTRPDLAFDMVRPGIAVYGQTPIPALGDMGLRPAM 251 Query 276 TVKCAVALVKSIRAGEGVSYGHTWIAPRDTNLALLPIGYADGVFRSLGGRLEVLINGRRC 335 T++C VA +SI+AG+GVSYGHTWIA RDT +ALLPIGYADGV+RSL GRL+VLINGR Sbjct 252 TLRCPVAQTRSIKAGDGVSYGHTWIAQRDTTVALLPIGYADGVYRSLSGRLQVLINGRLR 311 Query 336 PGVGRICMDQFMVDLGPGPLDVAEGDEAILFGPGIRGEPTAQDWADLVGTIHYEVVTSPR 395 PGVGRICMDQF+VDLGPGP+DV++GDEAILFGPG RGE TAQDWA+++GTI+YE+VTSPR Sbjct 312 PGVGRICMDQFVVDLGPGPVDVSDGDEAILFGPGTRGEHTAQDWAEIIGTINYEIVTSPR 371 Query 396 GRITRTYREAENR 408 GR+ RTYR E+R Sbjct 372 GRVVRTYRR-ESR 383 >gi|120402493|ref|YP_952322.1| alanine racemase [Mycobacterium vanbaalenii PYR-1] gi|166969421|sp|A1T566.1|ALR_MYCVP RecName: Full=Alanine racemase gi|119955311|gb|ABM12316.1| alanine racemase [Mycobacterium vanbaalenii PYR-1] Length=390 Score = 506 bits (1304), Expect = 2e-141, Method: Compositional matrix adjust. Identities = 264/383 (69%), Positives = 303/383 (80%), Gaps = 2/383 (0%) Query 20 TTSLAMTPISQTPGLLAEAMVDLGAIEHNVRVLREHAGHAQLMAVVKADGYGHGATRVAQ 79 TT+ MT + P L A +DL AI HNV VLREHAG A +MAVVKADGYGHGAT+VA+ Sbjct 2 TTTPTMT--QKLPQALPTASIDLDAIAHNVAVLREHAGPAAVMAVVKADGYGHGATQVAR 59 Query 80 TALGAGAAELGVATVDEALALRADGITAPVLAWLHPPGIDFGPALLADVQVAVSSLRQLD 139 AL AGAAELGVATV EALALR DG+TA VLAWLHPPG DF PALLADV VAVSSLRQ Sbjct 60 AALAAGAAELGVATVGEALALRRDGVTARVLAWLHPPGTDFAPALLADVDVAVSSLRQFT 119 Query 140 ELLHAVRRTGRTATVTVKVDTGLNRNGVGPAQFPAMLTALRQAMAEDAVRLRGLMSHMVY 199 +LL A RTGRTA VTVK DTGL+RNGVG A +PA++ ALR+A ++ AVR+RGLMSH+ + Sbjct 120 DLLDAAGRTGRTADVTVKADTGLSRNGVGEADYPALVDALRRAASDGAVRVRGLMSHLAH 179 Query 200 ADKPDDSINDVQAQRFTAFLAQAREQGVRFEVAHLSNSSATMARPDLTFDLVRPGIAVYG 259 D P+ NDVQA+R T A +GV ++V HLSNS A + RPDL FD+VRPGIAVYG Sbjct 180 GDDPEHPFNDVQARRLTEMAKLAGARGVSYDVVHLSNSPAALTRPDLAFDMVRPGIAVYG 239 Query 260 LSPVPALGDMGLVPAMTVKCAVALVKSIRAGEGVSYGHTWIAPRDTNLALLPIGYADGVF 319 +P+P GD GL PAMTVKC V+ V+ +RAG+ VSYGHTW A DT LAL+P GYADGVF Sbjct 240 QTPIPQRGDFGLRPAMTVKCPVSAVRPVRAGDAVSYGHTWTAQTDTTLALVPAGYADGVF 299 Query 320 RSLGGRLEVLINGRRCPGVGRICMDQFMVDLGPGPLDVAEGDEAILFGPGIRGEPTAQDW 379 R+L R EV INGRR P VGRICMDQF+VDLGPGP+DVAEGD+AILFGPG GEPTAQDW Sbjct 300 RALSNRFEVSINGRRYPNVGRICMDQFVVDLGPGPVDVAEGDDAILFGPGTDGEPTAQDW 359 Query 380 ADLVGTIHYEVVTSPRGRITRTY 402 A+L+ TI+YEVVTSPRGRI RTY Sbjct 360 AELLDTINYEVVTSPRGRIVRTY 382 >gi|145225510|ref|YP_001136188.1| alanine racemase [Mycobacterium gilvum PYR-GCK] gi|145217996|gb|ABP47400.1| alanine racemase [Mycobacterium gilvum PYR-GCK] Length=383 Score = 504 bits (1299), Expect = 7e-141, Method: Compositional matrix adjust. Identities = 255/366 (70%), Positives = 299/366 (82%), Gaps = 0/366 (0%) Query 37 EAMVDLGAIEHNVRVLREHAGHAQLMAVVKADGYGHGATRVAQTALGAGAAELGVATVDE 96 A++DL AI HNV VLR+ AG A +MAVVKADGYGHGAT VA+ AL AGA LGVAT+DE Sbjct 13 SAVIDLDAIAHNVGVLRDRAGRAAVMAVVKADGYGHGATAVARAALAAGATNLGVATLDE 72 Query 97 ALALRADGITAPVLAWLHPPGIDFGPALLADVQVAVSSLRQLDELLHAVRRTGRTATVTV 156 AL+LR DG+TAPVL+WLHPPG DF PA+ AD++VA+SS RQLD+LL AV RTGRTATVTV Sbjct 73 ALSLRRDGVTAPVLSWLHPPGTDFTPAVQADIEVALSSRRQLDDLLRAVARTGRTATVTV 132 Query 157 KVDTGLNRNGVGPAQFPAMLTALRQAMAEDAVRLRGLMSHMVYADKPDDSINDVQAQRFT 216 K DTGL+RNGV PA P +++AL +A + AV + GLMSH+ + D PD ND QA+R T Sbjct 133 KADTGLSRNGVSPADHPGLVSALARAQTDGAVTVHGLMSHLAHGDVPDHPFNDEQARRLT 192 Query 217 AFLAQAREQGVRFEVAHLSNSSATMARPDLTFDLVRPGIAVYGLSPVPALGDMGLVPAMT 276 ++AR GV ++V HL NS A + RPDL FD+VRPGIAVYG +P+P GDMGL PAMT Sbjct 193 EMASEARSAGVAYDVVHLCNSPAALTRPDLAFDMVRPGIAVYGQTPIPERGDMGLRPAMT 252 Query 277 VKCAVALVKSIRAGEGVSYGHTWIAPRDTNLALLPIGYADGVFRSLGGRLEVLINGRRCP 336 VKC VALV+S+RAG+GVSYGHTW+APRDT LAL+P GYADGVFR+L R EV INGRR P Sbjct 253 VKCPVALVRSVRAGDGVSYGHTWLAPRDTTLALIPAGYADGVFRALSNRFEVTINGRRYP 312 Query 337 GVGRICMDQFMVDLGPGPLDVAEGDEAILFGPGIRGEPTAQDWADLVGTIHYEVVTSPRG 396 VGR+CMDQF+VDLGPGP+DVAEGD+AILFGPG GEPTAQDWADL+GTI+YEVVTSPRG Sbjct 313 NVGRVCMDQFVVDLGPGPVDVAEGDDAILFGPGDDGEPTAQDWADLLGTINYEVVTSPRG 372 Query 397 RITRTY 402 RI R Y Sbjct 373 RIVRGY 378 >gi|315445863|ref|YP_004078742.1| alanine racemase [Mycobacterium sp. Spyr1] gi|315264166|gb|ADU00908.1| alanine racemase [Mycobacterium sp. Spyr1] Length=375 Score = 504 bits (1299), Expect = 7e-141, Method: Compositional matrix adjust. Identities = 255/366 (70%), Positives = 299/366 (82%), Gaps = 0/366 (0%) Query 37 EAMVDLGAIEHNVRVLREHAGHAQLMAVVKADGYGHGATRVAQTALGAGAAELGVATVDE 96 A++DL AI HNV VLR+ AG A +MAVVKADGYGHGAT VA+ AL AGA LGVAT+DE Sbjct 5 SAVIDLDAIAHNVGVLRDRAGRAAVMAVVKADGYGHGATAVARAALAAGATNLGVATLDE 64 Query 97 ALALRADGITAPVLAWLHPPGIDFGPALLADVQVAVSSLRQLDELLHAVRRTGRTATVTV 156 AL+LR DG+TAPVL+WLHPPG DF PA+ AD++VA+SS RQLD+LL AV RTGRTATVTV Sbjct 65 ALSLRRDGVTAPVLSWLHPPGTDFTPAVQADIEVALSSRRQLDDLLRAVARTGRTATVTV 124 Query 157 KVDTGLNRNGVGPAQFPAMLTALRQAMAEDAVRLRGLMSHMVYADKPDDSINDVQAQRFT 216 K DTGL+RNGV PA P +++AL +A + AV + GLMSH+ + D PD ND QA+R T Sbjct 125 KADTGLSRNGVSPADHPGLVSALARAQTDGAVTVHGLMSHLAHGDVPDHPFNDEQARRLT 184 Query 217 AFLAQAREQGVRFEVAHLSNSSATMARPDLTFDLVRPGIAVYGLSPVPALGDMGLVPAMT 276 ++AR GV ++V HL NS A + RPDL FD+VRPGIAVYG +P+P GDMGL PAMT Sbjct 185 EMASEARSAGVAYDVVHLCNSPAALTRPDLAFDMVRPGIAVYGQTPIPERGDMGLRPAMT 244 Query 277 VKCAVALVKSIRAGEGVSYGHTWIAPRDTNLALLPIGYADGVFRSLGGRLEVLINGRRCP 336 VKC VALV+S+RAG+GVSYGHTW+APRDT LAL+P GYADGVFR+L R EV INGRR P Sbjct 245 VKCPVALVRSVRAGDGVSYGHTWLAPRDTTLALIPAGYADGVFRALSNRFEVTINGRRYP 304 Query 337 GVGRICMDQFMVDLGPGPLDVAEGDEAILFGPGIRGEPTAQDWADLVGTIHYEVVTSPRG 396 VGR+CMDQF+VDLGPGP+DVAEGD+AILFGPG GEPTAQDWADL+GTI+YEVVTSPRG Sbjct 305 NVGRVCMDQFVVDLGPGPVDVAEGDDAILFGPGDDGEPTAQDWADLLGTINYEVVTSPRG 364 Query 397 RITRTY 402 RI R Y Sbjct 365 RIVRGY 370 >gi|118472399|ref|YP_885954.1| alanine racemase [Mycobacterium smegmatis str. MC2 155] gi|3913029|sp|P94967.1|ALR_MYCSM RecName: Full=Alanine racemase gi|166969419|sp|A0QSR6.1|ALR_MYCS2 RecName: Full=Alanine racemase gi|1813550|gb|AAC45589.1| D-alanine racemase [Mycobacterium smegmatis] gi|118173686|gb|ABK74582.1| alanine racemase [Mycobacterium smegmatis str. MC2 155] Length=389 Score = 472 bits (1215), Expect = 4e-131, Method: Compositional matrix adjust. Identities = 258/382 (68%), Positives = 303/382 (80%), Gaps = 2/382 (0%) Query 21 TSLAMTPISQTPGLLAEAMVDLGAIEHNVRVLREHAGHAQLMAVVKADGYGHGATRVAQT 80 T+ MTP P A+ ++DLGAI+HNVRVLRE AG A +MAVVKAD YGHGA VA+T Sbjct 3 TTEPMTP--PAPLASAQTVIDLGAIDHNVRVLRELAGSADVMAVVKADAYGHGALPVART 60 Query 81 ALGAGAAELGVATVDEALALRADGITAPVLAWLHPPGIDFGPALLADVQVAVSSLRQLDE 140 AL AGAA LGVAT+ EALALR GITAPVLAWLHPPG DF PA+ ADV+VAVSS RQL++ Sbjct 61 ALAAGAAALGVATIPEALALREGGITAPVLAWLHPPGTDFAPAIAADVEVAVSSRRQLEQ 120 Query 141 LLHAVRRTGRTATVTVKVDTGLNRNGVGPAQFPAMLTALRQAMAEDAVRLRGLMSHMVYA 200 + A GRTATVTVKVDTGL+RNGVG A +P +L LR+A A+ A+R+RGLMSH+V+ Sbjct 121 VTAAAAEVGRTATVTVKVDTGLSRNGVGAADYPEVLDVLRRAQADGAIRVRGLMSHLVHG 180 Query 201 DKPDDSINDVQAQRFTAFLAQAREQGVRFEVAHLSNSSATMARPDLTFDLVRPGIAVYGL 260 D P++ N +Q QR ARE GV +EVAHL NS A M RPDL F++VRPGI++YGL Sbjct 181 DDPENPFNGLQGQRLADMRVYAREHGVDYEVAHLCNSPAAMTRPDLAFEMVRPGISLYGL 240 Query 261 SPVPALGDMGLVPAMTVKCAVALVKSIRAGEGVSYGHTWIAPRDTNLALLPIGYADGVFR 320 SP+P GDMGL PAMT+KC VALV+S+ AG+GVSYGH W+A RDT L LLPIGYADGV+R Sbjct 241 SPIPERGDMGLRPAMTLKCPVALVRSVHAGDGVSYGHRWVADRDTTLGLLPIGYADGVYR 300 Query 321 SLGGRLEVLINGRRCPGVGRICMDQFMVDLGPGPLDVAEGDEAILFGPGIRGEPTAQDWA 380 +L GR++VLI GRR VGRICMDQF+VDLGP DVA GD+AILFGPG GEPTAQDWA Sbjct 301 ALSGRIDVLIKGRRRRAVGRICMDQFVVDLGPDADDVAVGDDAILFGPGANGEPTAQDWA 360 Query 381 DLVGTIHYEVVTSPRGRITRTY 402 +L+ TIHYEVVTSPRGR+TRTY Sbjct 361 ELLDTIHYEVVTSPRGRVTRTY 382 >gi|226305403|ref|YP_002765361.1| alanine racemase [Rhodococcus erythropolis PR4] gi|226184518|dbj|BAH32622.1| alanine racemase [Rhodococcus erythropolis PR4] Length=400 Score = 438 bits (1126), Expect = 8e-121, Method: Compositional matrix adjust. Identities = 224/366 (62%), Positives = 264/366 (73%), Gaps = 0/366 (0%) Query 37 EAMVDLGAIEHNVRVLREHAGHAQLMAVVKADGYGHGATRVAQTALGAGAAELGVATVDE 96 EA+VDL AI HNVRVLRE AG A LMAV+KADGY HGA VA+TAL AGA ELGV T+ E Sbjct 29 EAVVDLDAIAHNVRVLREFAGDAALMAVIKADGYNHGAVAVARTALSAGARELGVTTIAE 88 Query 97 ALALRADGITAPVLAWLHPPGIDFGPALLADVQVAVSSLRQLDELLHAVRRTGRTATVTV 156 AL LR GITAPVLAWLH DF A+ +DV++ VSS R L ++ A R G+ ATVT+ Sbjct 89 ALVLREAGITAPVLAWLHGLDADFSSAIRSDVEIGVSSPRHLAAVVDAARVLGQQATVTL 148 Query 157 KVDTGLNRNGVGPAQFPAMLTALRQAMAEDAVRLRGLMSHMVYADKPDDSINDVQAQRFT 216 KVDTGLNRNGV ++P ML L A E +RLRG+ SH+ ++D+P + D+Q QR Sbjct 149 KVDTGLNRNGVSRTEWPQMLDDLATARDEGTIRLRGVFSHLAHSDEPHHDVIDMQKQRLI 208 Query 217 AFLAQAREQGVRFEVAHLSNSSATMARPDLTFDLVRPGIAVYGLSPVPALGDMGLVPAMT 276 + R +G EV HLSNS+AT+ RPDL FD+VRPGIA+YGLSPVP LGD GL PAMT Sbjct 209 EAVVDVRARGFEPEVVHLSNSAATVTRPDLQFDMVRPGIAIYGLSPVPELGDFGLRPAMT 268 Query 277 VKCAVALVKSIRAGEGVSYGHTWIAPRDTNLALLPIGYADGVFRSLGGRLEVLINGRRCP 336 ++ V LVK + AGEGVSYGH W+AP DT LALLP+GYADG+ RSL G+ EV + G+R Sbjct 269 LRAKVILVKKVAAGEGVSYGHQWVAPHDTTLALLPVGYADGLTRSLSGKFEVQLGGKRRQ 328 Query 337 GVGRICMDQFMVDLGPGPLDVAEGDEAILFGPGIRGEPTAQDWADLVGTIHYEVVTSPRG 396 VGRICMDQ +VDLGP V EGD AI FG G GEP AQ WAD++ TIHYEVVT RG Sbjct 329 AVGRICMDQVLVDLGPDGDGVREGDTAIFFGNGDHGEPNAQAWADVLDTIHYEVVTGIRG 388 Query 397 RITRTY 402 R RTY Sbjct 389 RTVRTY 394 >gi|229489364|ref|ZP_04383227.1| alanine racemase [Rhodococcus erythropolis SK121] gi|229323461|gb|EEN89219.1| alanine racemase [Rhodococcus erythropolis SK121] Length=400 Score = 437 bits (1125), Expect = 1e-120, Method: Compositional matrix adjust. Identities = 225/366 (62%), Positives = 265/366 (73%), Gaps = 0/366 (0%) Query 37 EAMVDLGAIEHNVRVLREHAGHAQLMAVVKADGYGHGATRVAQTALGAGAAELGVATVDE 96 EA+VDL AI HNVRVLRE AG A LMAV+KADGY HGA VA+TAL AGA ELGV T+ E Sbjct 29 EAVVDLDAIAHNVRVLREFAGDAALMAVIKADGYNHGAVAVARTALSAGARELGVTTIAE 88 Query 97 ALALRADGITAPVLAWLHPPGIDFGPALLADVQVAVSSLRQLDELLHAVRRTGRTATVTV 156 AL LR GITAPVLAWLH DF A+ +DV++ VSS R L ++ A R G+ ATVT+ Sbjct 89 ALVLREAGITAPVLAWLHGVDADFASAIRSDVEIGVSSPRHLAAVVGAARVLGQQATVTL 148 Query 157 KVDTGLNRNGVGPAQFPAMLTALRQAMAEDAVRLRGLMSHMVYADKPDDSINDVQAQRFT 216 KVDTGLNRNGV ++P ML L A E +RLRG+ SH+ ++D+P + D+Q QR Sbjct 149 KVDTGLNRNGVSRTEWPQMLDDLATARDEGTIRLRGVFSHLAHSDEPHHDVIDMQKQRLI 208 Query 217 AFLAQAREQGVRFEVAHLSNSSATMARPDLTFDLVRPGIAVYGLSPVPALGDMGLVPAMT 276 +A R +G EV HLSNS+AT+ RPDL FD+VRPGIA+YGLSPVP LGD GL PAMT Sbjct 209 DAVADVRARGFDPEVVHLSNSAATVTRPDLRFDMVRPGIAIYGLSPVPELGDFGLRPAMT 268 Query 277 VKCAVALVKSIRAGEGVSYGHTWIAPRDTNLALLPIGYADGVFRSLGGRLEVLINGRRCP 336 ++ V LVK + AGEGVSYGH W+AP DT LALLP+GYADG+ RSL G+ EV + G+R Sbjct 269 LRAKVILVKKVAAGEGVSYGHQWVAPHDTTLALLPVGYADGLSRSLSGKFEVQLGGKRRQ 328 Query 337 GVGRICMDQFMVDLGPGPLDVAEGDEAILFGPGIRGEPTAQDWADLVGTIHYEVVTSPRG 396 VGRICMDQ +VDLGP V EGD AI FG G GEP AQ WAD++ TIHYEVVT RG Sbjct 329 AVGRICMDQVLVDLGPDGDGVREGDTAIFFGNGDHGEPNAQAWADVLDTIHYEVVTGIRG 388 Query 397 RITRTY 402 R RTY Sbjct 389 RTVRTY 394 >gi|169630818|ref|YP_001704467.1| alanine racemase [Mycobacterium abscessus ATCC 19977] gi|169242785|emb|CAM63813.1| Alanine racemase [Mycobacterium abscessus] Length=405 Score = 437 bits (1123), Expect = 2e-120, Method: Compositional matrix adjust. Identities = 234/395 (60%), Positives = 285/395 (73%), Gaps = 11/395 (2%) Query 20 TTSLAMTPISQTPGLLAEAMVDLGAIEHNVRVLREHAGHAQLMAVVKADGYGHGATRVAQ 79 TT+ + P T A+A++DLGAI HNV++LREHAG A+LM VVKADGYGHGA RVA+ Sbjct 9 TTTDGLPP--STGATTAQAVIDLGAIAHNVKLLREHAGTARLMTVVKADGYGHGAVRVAR 66 Query 80 TALGAGAAELGVATVDEALALRADGITAPVLAWLHPPGIDFGPALLADVQVAVSSLRQLD 139 AL AGA ELGV ++ EAL +RA G+ AP+LAWLH PG D+ AL ADV+VAVSSL QL Sbjct 67 AALAAGADELGVTSIAEALQIRAAGLDAPLLAWLHAPGADYAAALHADVEVAVSSLGQLG 126 Query 140 ELLHAVRRTGRTATVTVKVDTGLNRNGVGPAQFPAMLTALRQAMAEDAVRLRGLMSHMVY 199 ELL A R TGR A ++KVDTGLNRNGV + AL +A AE+++RLRG+MSH Y Sbjct 127 ELLAAARSTGRQAITSIKVDTGLNRNGVPAGYTRDLFEALAKAQAEESIRLRGIMSHFAY 186 Query 200 ADKPDDSINDVQAQRFTAFLAQAREQGVRFEVAHLSNSSATMARPDLTFDLVRPGIAVYG 259 AD+P D+Q RF L AR G+R+E+AHLSNS+AT+ RPD +D+VRPGIAVYG Sbjct 187 ADQPGHPTVDMQIGRFNEALELARGFGLRYELAHLSNSAATLTRPDARYDMVRPGIAVYG 246 Query 260 LSPVPAL---------GDMGLVPAMTVKCAVALVKSIRAGEGVSYGHTWIAPRDTNLALL 310 ++P+ A L+PAM++ CAV+ VK + AGEGVSYGH W APRDTN AL+ Sbjct 247 INPLGAAESATSNRGRTSFDLIPAMSLTCAVSSVKPVSAGEGVSYGHVWTAPRDTNAALI 306 Query 311 PIGYADGVFRSLGGRLEVLINGRRCPGVGRICMDQFMVDLGPGPLDVAEGDEAILFGPGI 370 IGYADGV R+LG R EV I GRR P +GR+CMDQF+VDLG V GD A LFGPG Sbjct 307 GIGYADGVVRALGNRFEVAIGGRRYPNIGRVCMDQFVVDLGDNDAGVQAGDVATLFGPGT 366 Query 371 RGEPTAQDWADLVGTIHYEVVTSPRGRITRTYREA 405 GEPTAQDWA+L+ TI YEVVT PRGR+ RTYR++ Sbjct 367 GGEPTAQDWAELLDTIAYEVVTGPRGRVVRTYRDS 401 >gi|111023143|ref|YP_706115.1| alanine racemase [Rhodococcus jostii RHA1] gi|110822673|gb|ABG97957.1| alanine racemase [Rhodococcus jostii RHA1] Length=400 Score = 415 bits (1066), Expect = 8e-114, Method: Compositional matrix adjust. Identities = 222/366 (61%), Positives = 265/366 (73%), Gaps = 0/366 (0%) Query 37 EAMVDLGAIEHNVRVLREHAGHAQLMAVVKADGYGHGATRVAQTALGAGAAELGVATVDE 96 EA+VDL AI HNVR+LR+ A A +MAVVKADGY HGA VA+ AL AGA+ELGV TV E Sbjct 29 EAVVDLDAIAHNVRILRDSARDAAMMAVVKADGYNHGAVPVARAALAAGASELGVTTVSE 88 Query 97 ALALRADGITAPVLAWLHPPGIDFGPALLADVQVAVSSLRQLDELLHAVRRTGRTATVTV 156 AL LR GI APVLAWLH DF PA+ A V++ VSS R L ++ A R G TA VT+ Sbjct 89 ALTLRRAGIDAPVLAWLHTVDADFAPAIAAGVELGVSSPRHLAAVVAAARSVGTTAIVTI 148 Query 157 KVDTGLNRNGVGPAQFPAMLTALRQAMAEDAVRLRGLMSHMVYADKPDDSINDVQAQRFT 216 KVDTGLNRNGV P + +L L +A AE +VRLRG+ SH+ +AD+P + D Q R Sbjct 149 KVDTGLNRNGVAPDELAQVLVDLARAQAEGSVRLRGIFSHLAHADEPHHAWIDSQRDRLI 208 Query 217 AFLAQAREQGVRFEVAHLSNSSATMARPDLTFDLVRPGIAVYGLSPVPALGDMGLVPAMT 276 + +A A+ QG+ EV HLSNS+AT+ RPDL FD+VRPGIA+YGLSPVP LG GL PAMT Sbjct 209 SAIADAKRQGLVPEVVHLSNSAATLTRPDLRFDMVRPGIAIYGLSPVPELGQFGLRPAMT 268 Query 277 VKCAVALVKSIRAGEGVSYGHTWIAPRDTNLALLPIGYADGVFRSLGGRLEVLINGRRCP 336 ++ VALVK + AGEGVSYGH W+APRDT +ALLP GYADG+ RSL GR EV + +R P Sbjct 269 LRSRVALVKKVAAGEGVSYGHQWVAPRDTTVALLPFGYADGLPRSLSGRFEVQLGAQRRP 328 Query 337 GVGRICMDQFMVDLGPGPLDVAEGDEAILFGPGIRGEPTAQDWADLVGTIHYEVVTSPRG 396 G+GR+CMDQ +VDLGP V EGD A+ FG G GEP AQ WAD + TIHYEVVT RG Sbjct 329 GIGRVCMDQVVVDLGPDGGGVREGDTAVFFGNGDLGEPNAQAWADELDTIHYEVVTGVRG 388 Query 397 RITRTY 402 R R+Y Sbjct 389 RTVRSY 394 >gi|54022846|ref|YP_117088.1| alanine racemase [Nocardia farcinica IFM 10152] gi|54014354|dbj|BAD55724.1| putative alanine racemase [Nocardia farcinica IFM 10152] Length=381 Score = 409 bits (1051), Expect = 5e-112, Method: Compositional matrix adjust. Identities = 226/366 (62%), Positives = 265/366 (73%), Gaps = 1/366 (0%) Query 37 EAMVDLGAIEHNVRVLREHAGHAQLMAVVKADGYGHGATRVAQTALGAGAAELGVATVDE 96 EA+VDL AI HNVRVLRE+AG A +M VVKADGY HGA VA+TAL AGA ELGV TV E Sbjct 12 EAVVDLDAIAHNVRVLREYAGDAAMMVVVKADGYNHGAVEVARTALAAGARELGVTTVAE 71 Query 97 ALALRADGITAPVLAWLHPPGIDFGPALLADVQVAVSSLRQLDELLHAVRRTGRTATVTV 156 AL LR GITAPVL WL+ D+ A+ AD+++ VS QL + A R TGRTATVT+ Sbjct 72 ALRLREAGITAPVLCWLNTLSADYAAAVAADIEIGVSGTEQLRAVATAARATGRTATVTL 131 Query 157 KVDTGLNRNGVGPAQFPAMLTALRQAMAEDAVRLRGLMSHMVYADKPDDSINDVQAQRFT 216 KVDTGLNRNG+ + P +L L + + E VRLR + SH+ +AD+P D Q RFT Sbjct 132 KVDTGLNRNGIAADELPTVLDLLGELVEEKTVRLRAMFSHLAHADEPKHPFLDEQRDRFT 191 Query 217 AFLAQAREQGVRFEVAHLSNSSATMARPDLTFDLVRPGIAVYGLSPVPALGDMGLVPAMT 276 A A A +G+R E+ HL+NS+AT+ RPDL FD+VRPGIAVYGLSPVP LGD GL PAMT Sbjct 192 AAAAAATARGLRPELLHLANSAATVTRPDLAFDMVRPGIAVYGLSPVPELGDFGLRPAMT 251 Query 277 VKCAVALVKSIRAGEGVSYGHTWIAPRDTNLALLPIGYADGVFRSLGGRLEVLINGRRCP 336 + VALVK + GEGVSYGH WIAPRDT +AL+P GYADGVFR L GR +V + G R P Sbjct 252 FQAQVALVKRVAEGEGVSYGHQWIAPRDTTVALIPAGYADGVFRPLSGRFDVWLGGTRRP 311 Query 337 GVGRICMDQFMVDLGPGPLDVAEGDEAILFGPGIRGEPTAQDWADLVGTIHYEVVTSPRG 396 VGR+CMDQF+VDLG VA GD A+LFG G G P AQ+WADL+GTIHYEVV SPRG Sbjct 312 NVGRVCMDQFVVDLGDDAAGVAAGDTAVLFGGG-PGVPGAQEWADLLGTIHYEVVCSPRG 370 Query 397 RITRTY 402 R R Y Sbjct 371 RAVRRY 376 >gi|226365649|ref|YP_002783432.1| alanine racemase [Rhodococcus opacus B4] gi|226244139|dbj|BAH54487.1| alanine racemase [Rhodococcus opacus B4] Length=400 Score = 400 bits (1029), Expect = 1e-109, Method: Compositional matrix adjust. Identities = 221/364 (61%), Positives = 263/364 (73%), Gaps = 0/364 (0%) Query 39 MVDLGAIEHNVRVLREHAGHAQLMAVVKADGYGHGATRVAQTALGAGAAELGVATVDEAL 98 +VDL AI HNVR+LR+ A A +MAVVKADGY HGA VA+ AL AGA+ELGV TV EAL Sbjct 31 VVDLDAIAHNVRILRDSARGAAMMAVVKADGYNHGAVAVARAALAAGASELGVTTVSEAL 90 Query 99 ALRADGITAPVLAWLHPPGIDFGPALLADVQVAVSSLRQLDELLHAVRRTGRTATVTVKV 158 LR GI APVLAWLH DF PA+ ADV++ VSS R L ++ A RR G A VT+KV Sbjct 91 TLRRAGIDAPVLAWLHTVDADFAPAIAADVELGVSSPRHLAAVVAAARRVGTPAIVTMKV 150 Query 159 DTGLNRNGVGPAQFPAMLTALRQAMAEDAVRLRGLMSHMVYADKPDDSINDVQAQRFTAF 218 DTGLNRNGV P + +L L +A AE +VRLRG+ SH+ +AD+P + D Q R Sbjct 151 DTGLNRNGVAPDELAQVLVDLARAQAEGSVRLRGIFSHLAHADEPHHAWIDSQRDRLVDA 210 Query 219 LAQAREQGVRFEVAHLSNSSATMARPDLTFDLVRPGIAVYGLSPVPALGDMGLVPAMTVK 278 +A A+ G+ EV HLSNS+AT+ RPDL FD+VRPGIA+YGLSPVP LG GL PAMT++ Sbjct 211 IADAKRHGLVPEVVHLSNSAATLTRPDLRFDMVRPGIAIYGLSPVPELGQFGLRPAMTLR 270 Query 279 CAVALVKSIRAGEGVSYGHTWIAPRDTNLALLPIGYADGVFRSLGGRLEVLINGRRCPGV 338 VALVK + AGEGVSYGH W+APRDT +ALLP+GYADG+ RSL GR EV + R PG+ Sbjct 271 SRVALVKKVAAGEGVSYGHQWVAPRDTTVALLPLGYADGLPRSLSGRFEVQLGAERRPGI 330 Query 339 GRICMDQFMVDLGPGPLDVAEGDEAILFGPGIRGEPTAQDWADLVGTIHYEVVTSPRGRI 398 GR+CMDQ +VDLGP V EGD A+ FG G GEP AQ+WAD + TIHYEVVT RGR Sbjct 331 GRVCMDQVVVDLGPDGGGVREGDTAVFFGNGDLGEPIAQEWADKLDTIHYEVVTGVRGRT 390 Query 399 TRTY 402 RTY Sbjct 391 VRTY 394 >gi|325675498|ref|ZP_08155182.1| D-alanine racemase [Rhodococcus equi ATCC 33707] gi|325553469|gb|EGD23147.1| D-alanine racemase [Rhodococcus equi ATCC 33707] Length=414 Score = 399 bits (1024), Expect = 6e-109, Method: Compositional matrix adjust. Identities = 222/403 (56%), Positives = 272/403 (68%), Gaps = 2/403 (0%) Query 2 KRFWENVGKPNDTTDGRGTTSLAMTPISQTPGLLAEAMVDLGAIEHNVRVLREHAGHAQL 61 +F + DT + + +A AEA++DL A+ HN+ +LREHAG A + Sbjct 4 SKFVTTTAQEPDTAPTQTSAPVAANTPPSAAAPQAEAVIDLDAVAHNIGILREHAGGATV 63 Query 62 MAVVKADGYGHGATRVAQTALGAGAAELGVATVDEALALRADGITAPVLAWLHPPGIDFG 121 MAVVKAD Y HGA VA+ AL AGA ELGV T+ E L L+ GITAPVL+WLH DF Sbjct 64 MAVVKADAYNHGAVPVARAALAAGAGELGVTTLAEGLELKNAGITAPVLSWLHTADSDFA 123 Query 122 PALLADVQVAVSSLRQLDELLHAVRRTGRTATVTVKVDTGLNRNGVGPAQFPAMLTALRQ 181 PA+ A V++ +SS R L + A R+ G ATVTVKVDTGLNRNGV ++ L L + Sbjct 124 PAVAAGVELGLSSPRHLAAVAAAARQVGTAATVTVKVDTGLNRNGVSREEWTDFLKDLAR 183 Query 182 AMAEDAVRLRGLMSHMVYADKPDDSINDVQAQRFTAFLAQAREQGVRFEVAHLSNSSATM 241 AE AVR +G+ SH+ +AD+P + D Q +RFT+ L A G+ E AHLSNS+AT+ Sbjct 184 VEAEGAVRFKGVFSHLAHADEPHHPVIDDQRERFTSALEDAERIGLVPEAAHLSNSAATL 243 Query 242 ARPDLTFDLVRPGIAVYGLSPVPALGDMGLVPAMTVKCAVALVKSIRAGEGVSYGHTWIA 301 RPDL FD+VRPGIA+YGLSPVP LG GL P MT + VALVK + AGEGVSYGHTW+A Sbjct 244 TRPDLRFDMVRPGIAIYGLSPVPDLGTFGLRPVMTFRSRVALVKKVAAGEGVSYGHTWVA 303 Query 302 PRDTNLALLPIGYADGVFRSLGGRLEVLINGRRCPGVGRICMDQFMVDLGPGPLDVAEGD 361 P DT +ALLP+GYADG+ R+LGGR EV + R PG+GR+CMDQ +VDLGP V EGD Sbjct 304 PHDTTVALLPVGYADGIPRALGGRFEVWLGDDRRPGIGRVCMDQVVVDLGPDGAGVREGD 363 Query 362 EAILF--GPGIRGEPTAQDWADLVGTIHYEVVTSPRGRITRTY 402 A+ F G G RG P AQDWAD + TIHYEVVTS RGR RTY Sbjct 364 TAVFFGDGDGDRGVPHAQDWADALDTIHYEVVTSVRGRTIRTY 406 >gi|312140864|ref|YP_004008200.1| alanine racemase [Rhodococcus equi 103S] gi|311890203|emb|CBH49521.1| putative secreted alanine racemase [Rhodococcus equi 103S] Length=414 Score = 396 bits (1018), Expect = 3e-108, Method: Compositional matrix adjust. Identities = 221/403 (55%), Positives = 272/403 (68%), Gaps = 2/403 (0%) Query 2 KRFWENVGKPNDTTDGRGTTSLAMTPISQTPGLLAEAMVDLGAIEHNVRVLREHAGHAQL 61 +F + DT + + +A AEA++DL A+ +N+ +LREHAG A + Sbjct 4 SKFVTTTAQEPDTAPTQTSAPVAANTPPSAAAPQAEAVIDLDAVAYNIGILREHAGGATV 63 Query 62 MAVVKADGYGHGATRVAQTALGAGAAELGVATVDEALALRADGITAPVLAWLHPPGIDFG 121 MAVVKAD Y HGA VA+ AL AGA ELGV T+ E L L+ GITAPVL+WLH DF Sbjct 64 MAVVKADAYNHGAVPVARAALAAGAGELGVTTLAEGLELKNAGITAPVLSWLHTADSDFA 123 Query 122 PALLADVQVAVSSLRQLDELLHAVRRTGRTATVTVKVDTGLNRNGVGPAQFPAMLTALRQ 181 PA+ A V++ +SS R L + A R+ G ATVTVKVDTGLNRNGV ++ L L + Sbjct 124 PAVAAGVELGLSSPRHLAAVAAAARQVGTAATVTVKVDTGLNRNGVSREEWTDFLKDLAR 183 Query 182 AMAEDAVRLRGLMSHMVYADKPDDSINDVQAQRFTAFLAQAREQGVRFEVAHLSNSSATM 241 AE AVR +G+ SH+ +AD+P + D Q +RFT+ L A G+ E AHLSNS+AT+ Sbjct 184 VEAEGAVRFKGVFSHLAHADEPHHPVIDDQRERFTSALEDAERIGLVPEAAHLSNSAATL 243 Query 242 ARPDLTFDLVRPGIAVYGLSPVPALGDMGLVPAMTVKCAVALVKSIRAGEGVSYGHTWIA 301 RPDL FD+VRPGIA+YGLSPVP LG GL P MT + VALVK + AGEGVSYGHTW+A Sbjct 244 TRPDLRFDMVRPGIAIYGLSPVPDLGTFGLRPVMTFRSRVALVKKVAAGEGVSYGHTWVA 303 Query 302 PRDTNLALLPIGYADGVFRSLGGRLEVLINGRRCPGVGRICMDQFMVDLGPGPLDVAEGD 361 P DT +ALLP+GYADG+ R+LGGR EV + R PG+GR+CMDQ +VDLGP V EGD Sbjct 304 PHDTTVALLPVGYADGIPRALGGRFEVWLGDDRRPGIGRVCMDQVVVDLGPDGAGVREGD 363 Query 362 EAILF--GPGIRGEPTAQDWADLVGTIHYEVVTSPRGRITRTY 402 A+ F G G RG P AQDWAD + TIHYEVVTS RGR RTY Sbjct 364 TAVFFGDGDGDRGVPHAQDWADALDTIHYEVVTSVRGRTIRTY 406 >gi|333921697|ref|YP_004495278.1| Alanine racemase [Amycolicicoccus subflavus DQS3-9A1] gi|333483918|gb|AEF42478.1| Alanine racemase [Amycolicicoccus subflavus DQS3-9A1] Length=349 Score = 389 bits (1000), Expect = 4e-106, Method: Compositional matrix adjust. Identities = 210/346 (61%), Positives = 248/346 (72%), Gaps = 5/346 (1%) Query 62 MAVVKADGYGHGATRVAQTALGAGAAELGVATVDEALALRADGITAPVLAWLHPPGIDFG 121 M VVKADGYGHGA VA+ AL AGAA+LGVATVDEA+ LR GI AP+L WLH P DF Sbjct 1 MVVVKADGYGHGAVPVARAALAAGAAQLGVATVDEAVHLRDAGIEAPLLCWLHTPDTDFA 60 Query 122 PALLADVQVAVSSLRQLDELLHAVRRTGRTATVTVKVDTGLNRNGVGPAQFPAMLTALRQ 181 P L +V + VSS R LD +L +VR +G A V VKVD+GLNRNGV ++P + ALR+ Sbjct 61 PVLSRNVDIGVSSPRHLDGVLRSVRLSGIQARVAVKVDSGLNRNGVSAFEWPVLRDALRK 120 Query 182 AMAEDAVRLRGLMSHMVYADKPDDSINDVQAQRFTAFLAQAREQGVRFEVAHLSNSSATM 241 A+AE+AV + SH+ +AD+PD I D QA RF +A A + G+ + HLSNS+ATM Sbjct 121 AVAEEAVVMTSFFSHLAHADEPDHPIIDQQAARFRETVADAEKHGLETGLLHLSNSAATM 180 Query 242 ARPDLTFDLVRPGIAVYGLSPVPALGDMGLVPAMTVKCAVALVKSIRAGEGVSYGHTWIA 301 RPDL FD+VRPGIA+YGLSPVP G MGL PAMT + VAL+K + AGEGVSYGH WIA Sbjct 181 TRPDLRFDMVRPGIALYGLSPVPERGQMGLRPAMTARARVALIKRVAAGEGVSYGHVWIA 240 Query 302 PRDTNLALLPIGYADGVFRSLGGRLEVLINGRRCPGVGRICMDQFMVDL-----GPGPLD 356 PRDT +ALLP+GYADGV R L G+ V ING R P VGR+CMDQF+VDL G Sbjct 241 PRDTTVALLPVGYADGVSRLLTGKFGVQINGHRYPAVGRVCMDQFVVDLGPGGGAEGAAA 300 Query 357 VAEGDEAILFGPGIRGEPTAQDWADLVGTIHYEVVTSPRGRITRTY 402 V EGD A+LFGPG GE AQDWAD +GTIHYEVVT +GR RTY Sbjct 301 VKEGDTAVLFGPGDEGESLAQDWADALGTIHYEVVTGIKGRAVRTY 346 >gi|326381872|ref|ZP_08203565.1| alanine racemase [Gordonia neofelifaecis NRRL B-59395] gi|326199298|gb|EGD56479.1| alanine racemase [Gordonia neofelifaecis NRRL B-59395] Length=386 Score = 353 bits (906), Expect = 3e-95, Method: Compositional matrix adjust. Identities = 197/369 (54%), Positives = 250/369 (68%), Gaps = 5/369 (1%) Query 38 AMVDLGAIEHNVRVLREHAGHAQLMAVVKADGYGHGATRVAQTALGAGAAELGVATVDEA 97 A VDLGAI HNV VLR+ +G A ++AVVKADGY HGA V +TAL AGA LGVA + EA Sbjct 9 ATVDLGAIAHNVGVLRDRSG-ADVIAVVKADGYAHGAVPVGRTALRAGAIALGVAQIREA 67 Query 98 LALRADGITAPVLAWLHPPGIDFGPALLADVQVAVSSLRQLDELLHAVRRTGRTATVTVK 157 ALRA G+ ++AWLH DF A+ + +AVSS RQL ++ A R GRTATV+VK Sbjct 68 RALRAAGLDGHLIAWLHTTDADFAGAITDGIDIAVSSPRQLAAVVQAARGLGRTATVSVK 127 Query 158 VDTGLNRNGVGPAQFPAMLTALRQAMAEDAVRLRGLMSHMVYADKPDDSINDVQAQRFTA 217 +DTGL R+GV P ++ A A+ A AE A+ L G M H+ + D P+ +N +Q +R Sbjct 128 LDTGLARSGVAPDEWDATAEAIAAASAEGAISLHGAMCHLAFGDVPEHPLNSLQGERLDE 187 Query 218 FLAQAREQGVRFEVAHLSNSSATMARPDLTFDLVRPGIAVYGLSPVPALGDMGLVPAMTV 277 +A +GV E+ H++NS A + RPDL D VRPG++VYG SPVP +GD GL+PAMT+ Sbjct 188 AVADLTRRGVTPELVHIANSPAALTRPDLARDAVRPGLSVYGYSPVPEIGDFGLIPAMTL 247 Query 278 KCAVALVKSIRAGEGVSYGHTWIAPRDTNLALLPIGYADGVFRSLGGRLEVLINGRRCPG 337 + ++L+K I AG+GVSY HTW+APR+T L ++P GYADGV R L GRL V +NGR P Sbjct 248 ETRISLIKRIPAGQGVSYNHTWVAPRNTFLGVVPAGYADGVPRGLSGRLGVHVNGRVFPS 307 Query 338 VGRICMDQFMVDLGPGPLDVAEGDEAILFGPGI--RGE--PTAQDWADLVGTIHYEVVTS 393 VGRICMDQ ++DLGP VAEGD AILFGP GE PTA DWAD GTI YE+++ Sbjct 308 VGRICMDQLVIDLGPDGGGVAEGDRAILFGPACASAGEPVPTATDWADATGTIDYEIISR 367 Query 394 PRGRITRTY 402 R R Y Sbjct 368 VGSRAVRRY 376 >gi|296138608|ref|YP_003645851.1| alanine racemase [Tsukamurella paurometabola DSM 20162] gi|296026742|gb|ADG77512.1| alanine racemase [Tsukamurella paurometabola DSM 20162] Length=380 Score = 353 bits (905), Expect = 4e-95, Method: Compositional matrix adjust. Identities = 204/380 (54%), Positives = 251/380 (67%), Gaps = 6/380 (1%) Query 25 MTPISQTPGLL--AEAMVDLGAIEHNVRVLREHAGHAQLMAVVKADGYGHGATRVAQTAL 82 M +++ PG L A++DLGA+ HNVRV+ HA A +MAV+KADGYGHGA VA+ AL Sbjct 1 MLVMTEIPGRLDRPTALIDLGAVTHNVRVVARHAPTADVMAVLKADGYGHGAVPVARAAL 60 Query 83 GAGAAELGVATVDEALALRADGITAPVLAWLHPPGIDFGPALLADVQVAVSSLRQLDELL 142 GA ELGV TVDEAL LR GIT P+L+WL G + A+ ADV++ VSS RQL E+L Sbjct 61 AGGATELGVTTVDEALVLRDAGITVPILSWLSTSG--YERAIAADVRIGVSSPRQLAEVL 118 Query 143 HAVRRTGRTATVTVKVDTGLNRNGVGPAQFPAMLTALRQAMAEDAVRLRGLMSHMVYADK 202 A R G A + VKVDTGLNRNGV P ++ AL A RL+G+ +H+ + D+ Sbjct 119 AAAGRAGAPAVLHVKVDTGLNRNGVAPHEWATTRDALVDAERAGLARLQGVFTHLAHGDE 178 Query 203 PDDSINDVQAQRFTAFLAQAREQGVRFEVAHLSNSSATMARPDLTFDLVRPGIAVYGLSP 262 PD DVQ A A AR G+ H +NS+A + RPDL FDLVRPGIA+YG P Sbjct 179 PDHPFLDVQRDALAAAAADARAHGLYPTQVHAANSAAALTRPDLHFDLVRPGIAIYGGVP 238 Query 263 VPALGDMGLVPAMTVKCAVALVKSIRAGEGVSYGHTWIAPRDTNLALLPIGYADGVFRSL 322 VP D GL P MT V LVK + AG+GVSYGHTWIAPRDT + L+P GYADGV+R L Sbjct 239 VPDR-DFGLRPVMTFAAPVILVKPLAAGDGVSYGHTWIAPRDTVVGLVPAGYADGVWRPL 297 Query 323 GGRLEVLINGRRCPGVGRICMDQFMVDLGPGPLDVAEGDEAILFGPGIRGEPTAQDWADL 382 GR EV + GRR P VGR+CMDQF++DLGP V+EGD A+LFG G A DW + Sbjct 298 SGRFEVTVQGRRFPQVGRVCMDQFVIDLGPDGGGVSEGDTAVLFG-AAPGAARACDWGEK 356 Query 383 VGTIHYEVVTSPRGRITRTY 402 +GTI YEV+T+ RGR+ R Y Sbjct 357 LGTIDYEVLTAVRGRVHREY 376 >gi|343928266|ref|ZP_08767719.1| alanine racemase [Gordonia alkanivorans NBRC 16433] gi|343761796|dbj|GAA14645.1| alanine racemase [Gordonia alkanivorans NBRC 16433] Length=385 Score = 353 bits (905), Expect = 4e-95, Method: Compositional matrix adjust. Identities = 203/368 (56%), Positives = 247/368 (68%), Gaps = 1/368 (0%) Query 38 AMVDLGAIEHNVRVLREHAGHAQLMAVVKADGYGHGATRVAQTALGAGAAELGVATVDEA 97 A VDLGAI HN+ VLR A +A +MAVVKAD YGHGA VA+ A+ AGAAELGVA + EA Sbjct 8 ATVDLGAIAHNLDVLRT-ASNAAVMAVVKADAYGHGAVPVAKAAIAAGAAELGVAHITEA 66 Query 98 LALRADGITAPVLAWLHPPGIDFGPALLADVQVAVSSLRQLDELLHAVRRTGRTATVTVK 157 ALRA GI AP+ AWLH PG DF A+ +++A+SS QLD ++ A R TG A+VT K Sbjct 67 RALRAAGIDAPITAWLHTPGADFSGAVTDRIEIALSSAAQLDAVVAAARATGVEASVTAK 126 Query 158 VDTGLNRNGVGPAQFPAMLTALRQAMAEDAVRLRGLMSHMVYADKPDDSINDVQAQRFTA 217 VDTGLNR+GV ++ L +A A AV +R +M H+ D+PD +N QA R A Sbjct 127 VDTGLNRSGVAVDEWDDFAEKLAKAHAGGAVTVRAVMCHLARGDEPDHPLNSEQAARLDA 186 Query 218 FLAQAREQGVRFEVAHLSNSSATMARPDLTFDLVRPGIAVYGLSPVPALGDMGLVPAMTV 277 A G E+ H++NS A + RPDL DLVRPGIA+YG +PVP LGD GL+PAMT+ Sbjct 187 AAADLARLGAAPEIMHIANSPAALTRPDLARDLVRPGIALYGRTPVPELGDFGLIPAMTL 246 Query 278 KCAVALVKSIRAGEGVSYGHTWIAPRDTNLALLPIGYADGVFRSLGGRLEVLINGRRCPG 337 VALVK + AG+GVSY HTWI P DT +A++P GYADGV R L GR+ V I R G Sbjct 247 SARVALVKKVAAGQGVSYSHTWITPHDTVVAIVPAGYADGVPRLLSGRIRVRIADRLFDG 306 Query 338 VGRICMDQFMVDLGPGPLDVAEGDEAILFGPGIRGEPTAQDWADLVGTIHYEVVTSPRGR 397 +GRICMDQF+VDLGP V EGDE LFG G RG TA+DWAD +GTI YE+V+ R Sbjct 307 IGRICMDQFVVDLGPDGAGVREGDEVELFGTGARGGVTAKDWADAIGTIDYEIVSQVGNR 366 Query 398 ITRTYREA 405 R Y A Sbjct 367 AVRRYLNA 374 >gi|296268597|ref|YP_003651229.1| alanine racemase [Thermobispora bispora DSM 43833] gi|296091384|gb|ADG87336.1| alanine racemase [Thermobispora bispora DSM 43833] Length=381 Score = 345 bits (884), Expect = 9e-93, Method: Compositional matrix adjust. Identities = 192/379 (51%), Positives = 252/379 (67%), Gaps = 3/379 (0%) Query 25 MTPISQTPGLLAEAMVDLGAIEHNVRVLREHAGHAQLMAVVKADGYGHGATRVAQTALGA 84 M ++ P A+A VDL A+ HNV +L EHAG A+LMAVVKADGYGHGA VA+T + A Sbjct 1 MDVLTVPPVTHAQARVDLAAVRHNVSLLAEHAGGAELMAVVKADGYGHGAVPVARTCVAA 60 Query 85 GAAELGVATVDEALALRADGITAPVLAWLHPPGIDFGPALLADVQVAVSSLRQLDELLHA 144 GAA +G A V EA+ALR GITAP+LAW+ PG AL D++++ +L +DE+ A Sbjct 61 GAARIGTALVTEAIALRDAGITAPILAWIFTPGERPDEALRRDIELSAGALWAIDEIAAA 120 Query 145 VRRTGRTATVTVKVDTGLNRNGVGPAQFPAMLTALRQAMAEDAVRLRGLMSHMVYADKPD 204 RRTGRTA V +KVDTG++R G +PA+L AE ++ + G+ SH+ AD P+ Sbjct 121 ARRTGRTAKVHLKVDTGMSRAGATLDDWPALLQHALAVQAEGSIEITGIWSHLACADTPE 180 Query 205 DSINDVQAQRFTAFLAQAREQGVRFEVA-HLSNSSATMARPDLTFDLVRPGIAVYGLSPV 263 + +N+ Q F L A + GV V H++NS+AT+ P +D+VRPGIA+YGLSP Sbjct 181 NPVNERQLAVFDQALRIADKAGVSSGVIRHIANSAATLTLPAARYDMVRPGIAIYGLSPA 240 Query 264 PALGDMGLVPAMTVKCAVALVKSIRAGEGVSYGHTWIAPRDTNLALLPIGYADGVFRSLG 323 P GD GL PAMT+ ++ VK + AG GVSYGHT++A R T L ++P+GYADG+ R+ Sbjct 241 PRHGDFGLRPAMTLVARLSSVKRVAAGAGVSYGHTYVAERATTLGIVPLGYADGIMRAGS 300 Query 324 GRLEVLINGRRCPGVGRICMDQFMVDLGPGPLDVAEGDEAILFGPGIRGEPTAQDWADLV 383 RLEVL GRR GR+CMDQF +DLG P + GDE ILFGPG GEPT Q+WAD + Sbjct 301 NRLEVLAAGRRRRIAGRVCMDQFAIDLGDDPAE--PGDEVILFGPGDHGEPTCQEWADQL 358 Query 384 GTIHYEVVTSPRGRITRTY 402 GTI YE+VT GR+ R + Sbjct 359 GTITYEIVTKIGGRVPRIH 377 >gi|319949830|ref|ZP_08023848.1| alanine racemase [Dietzia cinnamea P4] gi|319436508|gb|EFV91610.1| alanine racemase [Dietzia cinnamea P4] Length=409 Score = 342 bits (877), Expect = 7e-92, Method: Compositional matrix adjust. Identities = 200/379 (53%), Positives = 253/379 (67%), Gaps = 4/379 (1%) Query 25 MTPISQTPGLLAEAMVDLGAIEHNVRVLREHAGHAQLMAVVKADGYGHGATRVAQTALGA 84 M P+ P A +DL AIEHN RVL A A++MAVVKAD YGHGA V+ AL Sbjct 1 MGPV--VPPAPCRAEIDLDAIEHNSRVLVRSARGARVMAVVKADAYGHGAVPVSLAALRG 58 Query 85 GAAELGVATVDEALALRADGITAPVLAWLHPPGIDFGPALLADVQVAVSSLRQLDELLHA 144 GA LGV T+ EAL LR+ GI A +LAWL+ D A+ ADV +A+ S LD +L A Sbjct 59 GAHALGVTTIAEALQLRSAGIDAEILAWLYSVSDDVRAAVEADVDLAIPSPAHLDTVLEA 118 Query 145 VRRTGRTATVTVKVDTGLNRNGVGPAQFPAMLTALRQAMAEDAVRLRGLMSHMVYADKPD 204 RRTGR A VT K+DTGL R+G+ ++PA+L L A A V + GLM+H +AD P Sbjct 119 ARRTGRRARVTPKIDTGLARSGISLEEWPAVLERLVTATAGGLVEVTGLMAHFAHADDPG 178 Query 205 DSINDVQAQRFTAFLAQAREQGVRFEVAHLSNSSATMARPDLTFDLVRPGIAVYGLSPVP 264 + + D+Q R + QAR +G+ V H +NS+AT+ RP+ F++VRPGIA+YGL+PV Sbjct 179 NPVIDLQVARLHECVGQARGRGLDCPVNHHANSAATLTRPEDGFEMVRPGIALYGLNPVE 238 Query 265 ALGDMGLVPAMTVKCAVALVKSIRAGEGVSYGHTWIAPRDTNLALLPIGYADGVFRSLGG 324 L ++ LVPAMT V +VK + AG+GVSYGHTW AP DT +AL+ GYADGV+R L G Sbjct 239 GL-EVDLVPAMTFSAEVLMVKRLAAGQGVSYGHTWHAPHDTTVALIAAGYADGVWRLLSG 297 Query 325 RLEVLINGRRCPGVGRICMDQFMVDLGPGPLD-VAEGDEAILFGPGIRGEPTAQDWADLV 383 RL+V I GRR P VGR+CMDQF+VDLGP P V GD A+LFG G G PTA +WA+ + Sbjct 298 RLDVSIGGRRYPNVGRVCMDQFVVDLGPDPGQAVRVGDTAVLFGTGADGGPTAAEWAETL 357 Query 384 GTIHYEVVTSPRGRITRTY 402 GTIHYEVVT+ RGR R + Sbjct 358 GTIHYEVVTAVRGRAARHH 376 >gi|291003863|ref|ZP_06561836.1| alanine racemase [Saccharopolyspora erythraea NRRL 2338] Length=378 Score = 339 bits (870), Expect = 5e-91, Method: Compositional matrix adjust. Identities = 188/367 (52%), Positives = 244/367 (67%), Gaps = 4/367 (1%) Query 36 AEAMVDLGAIEHNVRVLREHAGHAQLMAVVKADGYGHGATRVAQTALGAGAAELGVATVD 95 A+ +D+ AI HNV VL A A+ M +VK+DGYGHGA VA+ AL AGA ++GVA + Sbjct 9 ADLRIDVDAIRHNVGVLAARAAGARTMVIVKSDGYGHGAVTVARAALEAGAGQIGVAALG 68 Query 96 EALALRADGITAPVLAWLHPPGIDFGPALLADVQVAVSSLRQLDELLHAVRRTGRTATVT 155 EA+ALR GITAP++ WL+ G DF PAL V+++ SS+R L E+ G A + Sbjct 69 EAVALREAGITAPLMCWLYSRGDDFAPALRHGVELSASSVRGLREIAATAAELGLVARLH 128 Query 156 VKVDTGLNRNGVGPAQFPAMLTALRQAMAEDAVRLRGLMSHMVYADKPDDSINDVQAQRF 215 +K+DTGL R+G A++P ++ +A A+ V + + SH+ AD+ D QA RF Sbjct 129 LKIDTGLCRSGCPEAEWPNLVDEAAKAEADGHVEVVAVWSHLACADELGHPSIDNQALRF 188 Query 216 TAFLAQAREQGVRFEVAHLSNSSATMARPDLTFDLVRPGIAVYGLSPVPALGDMGLVPAM 275 +AR G+ + HL+NS+A + RPDL F++VRPGIAVYGL PVP GD GL PAM Sbjct 189 RRAYERARTAGL-GPIRHLANSAAVLTRPDLHFEMVRPGIAVYGLDPVPQDGDHGLRPAM 247 Query 276 TVKCAVALVKSIRAGEGVSYGHTWIAPRDTNLALLPIGYADGVFRSLGGRLEVLINGRRC 335 T + +V+L K + AGE VSYGHTW A R NLAL+P+GYADGV R+L GR+ V + GRR Sbjct 248 TFRSSVSLTKRVAAGESVSYGHTWTADRPVNLALVPVGYADGVPRTLSGRMSVWLAGRRR 307 Query 336 PGVGRICMDQFMVDLGPGPLDVAEGDEAILFGPGIRGEPTAQDWADLVGTIHYEVVTS-P 394 P VGR+CMDQ +V V EGDE ILFGPG RGEPTA +WAD +GTIHYE+VT Sbjct 308 PVVGRVCMDQLVVLCDDDV--VREGDEVILFGPGDRGEPTAAEWADELGTIHYEIVTGMY 365 Query 395 RGRITRT 401 R R+TRT Sbjct 366 RPRVTRT 372 >gi|134103194|ref|YP_001108855.1| alanine racemase [Saccharopolyspora erythraea NRRL 2338] gi|133915817|emb|CAM05930.1| alanine racemase [Saccharopolyspora erythraea NRRL 2338] Length=378 Score = 338 bits (866), Expect = 1e-90, Method: Compositional matrix adjust. Identities = 187/367 (51%), Positives = 243/367 (67%), Gaps = 4/367 (1%) Query 36 AEAMVDLGAIEHNVRVLREHAGHAQLMAVVKADGYGHGATRVAQTALGAGAAELGVATVD 95 A+ +D+ AI HNV VL A A+ M +VK+DGYGHG VA+ AL AGA ++GVA + Sbjct 9 ADLRIDVDAIRHNVGVLAARAAGARTMVIVKSDGYGHGTVTVARAALEAGAGQIGVAALG 68 Query 96 EALALRADGITAPVLAWLHPPGIDFGPALLADVQVAVSSLRQLDELLHAVRRTGRTATVT 155 EA+ALR GITAP++ WL+ G DF PAL V+++ SS+R L E+ G A + Sbjct 69 EAVALREAGITAPLMCWLYSRGDDFAPALRHGVELSASSVRGLREIAATAAELGLVARLH 128 Query 156 VKVDTGLNRNGVGPAQFPAMLTALRQAMAEDAVRLRGLMSHMVYADKPDDSINDVQAQRF 215 +K+DTGL R+G A++P ++ +A A+ V + + SH+ AD+ D QA RF Sbjct 129 LKIDTGLCRSGCPEAEWPNLVDEAAKAEADGHVEVVAVWSHLACADELGHPSIDNQALRF 188 Query 216 TAFLAQAREQGVRFEVAHLSNSSATMARPDLTFDLVRPGIAVYGLSPVPALGDMGLVPAM 275 +AR G+ + HL+NS+A + RPDL F++VRPGIAVYGL PVP GD GL PAM Sbjct 189 RRAYERARTAGL-GPIRHLANSAAVLTRPDLHFEMVRPGIAVYGLDPVPQDGDHGLRPAM 247 Query 276 TVKCAVALVKSIRAGEGVSYGHTWIAPRDTNLALLPIGYADGVFRSLGGRLEVLINGRRC 335 T + +V+L K + AGE VSYGHTW A R NLAL+P+GYADGV R+L GR+ V + GRR Sbjct 248 TFRSSVSLTKRVAAGESVSYGHTWTADRPVNLALVPVGYADGVPRTLSGRMSVWLAGRRR 307 Query 336 PGVGRICMDQFMVDLGPGPLDVAEGDEAILFGPGIRGEPTAQDWADLVGTIHYEVVTS-P 394 P VGR+CMDQ +V V EGDE ILFGPG RGEPTA +WAD +GTIHYE+VT Sbjct 308 PVVGRVCMDQLVVLCDDDV--VREGDEVILFGPGDRGEPTAAEWADELGTIHYEIVTGMY 365 Query 395 RGRITRT 401 R R+TRT Sbjct 366 RPRVTRT 372 >gi|331699117|ref|YP_004335356.1| Alanine racemase [Pseudonocardia dioxanivorans CB1190] gi|326953806|gb|AEA27503.1| Alanine racemase [Pseudonocardia dioxanivorans CB1190] Length=419 Score = 337 bits (865), Expect = 2e-90, Method: Compositional matrix adjust. Identities = 211/405 (53%), Positives = 265/405 (66%), Gaps = 11/405 (2%) Query 10 KPNDTTDGRGTTSLAMTPISQTPGLLAEAMVDLGAIEHNVRVLRE--HAGHAQLMAVVKA 67 +P+ G +A +S G AE +VDL A+ HNV +L A A MAVVK+ Sbjct 6 RPDGVVGGCDDAGVAQPSMSDR-GPRAELVVDLAAVRHNVGLLSRGAAASGAATMAVVKS 64 Query 68 DGYGHGATRVAQTALGAGAAELGVATVDEALALRADGITAPVLAWLHPPGIDFGPALLAD 127 DGYGHGA VA+ AL AGA+ LGV T+DEALALRADGI APVL+WLH P DF PA+ A Sbjct 65 DGYGHGAADVARAALQAGASWLGVCTLDEALALRADGIEAPVLSWLHLPHEDFAPAVAAG 124 Query 128 VQVAVSSLRQLDELLHAVRRTGRTATVTVKVDTGLNRNGVGPAQFPAMLTALRQAMAEDA 187 V ++VSS LD +L R R A + +K+DTGL+RNG +P ++ A +A A Sbjct 125 VDLSVSSHGHLDAVLAGARAVDRPARLHLKIDTGLSRNGCPEDDWPDLVDAAAKAAAAGR 184 Query 188 VRLRGLMSHMVYADKPDDSINDVQAQRFTAFLAQAREQGVRFEVAHLSNSSATMARPDLT 247 + + SH+ AD + + QA RF A AR++G+ + HL+NS+ATM RPDL Sbjct 185 CEVVAVWSHLAVADVARHPVTEAQAARFDAAWRVARDRGL-TPIRHLANSAATMTRPDLH 243 Query 248 FDLVRPGIAVYGLSPV-PALGDMGLVPAMTVKCAVALVKSIRAGEGVSYGHTWIAPRDTN 306 +DLVRPGIAVYGL P+ + + L PAMTV+ V LVK +RAGEGVSYGH + PRDT Sbjct 244 YDLVRPGIAVYGLDPLGRPVAESPLRPAMTVRGRVVLVKQVRAGEGVSYGHEFTTPRDTV 303 Query 307 LALLPIGYADGVFR--SLGGRLEVLINGRRCPGVGRICMDQFMVDLGP-GPLDVAEGDEA 363 LAL+PIGY DGV R + GGR+ V + GR P VGR+CMDQ +VD GP G +V EGD A Sbjct 304 LALVPIGYGDGVPRRMNFGGRMRVWLAGRSRPVVGRVCMDQVVVDCGPDGGAEVREGDVA 363 Query 364 ILFGPGIRGEPTAQDWADLVGTIHYEVVTSPRG-RITRTY--REA 405 +LFGPG G PTAQ+WAD +GTIHYEVVT +G R+TRT REA Sbjct 364 VLFGPGDDGAPTAQEWADELGTIHYEVVTGVQGRRMTRTVVGREA 408 >gi|317507715|ref|ZP_07965420.1| alanine racemase [Segniliparus rugosus ATCC BAA-974] gi|316253968|gb|EFV13333.1| alanine racemase [Segniliparus rugosus ATCC BAA-974] Length=386 Score = 335 bits (859), Expect = 9e-90, Method: Compositional matrix adjust. Identities = 188/377 (50%), Positives = 240/377 (64%), Gaps = 20/377 (5%) Query 37 EAMVDLGAIEHNVRVLREHAGHAQLMAVVKADGYGHGATRVAQTALGAGAAELGVATVDE 96 +A VD A+ HNVR+L + + A+++AV+KA+ YGHGA VA+T L AGAA++GVAT+DE Sbjct 8 QATVDHSALAHNVRLLIQASAPAKVIAVLKANAYGHGAVPVARTVLAAGAAQIGVATLDE 67 Query 97 ALALRADGITAPVLAWLHPPGIDFGPALLAD---------VQVAVSSLRQLDELLHAVRR 147 A LRA GI AP++AWLH F P+ +++ VS+ QL + A R Sbjct 68 AFELRAGGIEAPIIAWLHA----FDPSEAVAVFAEAVALGIELGVSTSTQLRAVAEAAMR 123 Query 148 TGRTATVTVKVDTGLNRNGVGPAQFPAMLTALRQAMAEDAVRLRGLMSHMVYADKPDDSI 207 A V VKVDTGLNR G + L A A AVR+R + SH+ AD+P+ Sbjct 124 ADEPAVVAVKVDTGLNRGGFAREDWRKAFADLANAEAAGAVRVRAVFSHLANADRPEYRT 183 Query 208 NDVQAQRFTAFLAQAREQGVRFEVAHLSNSSATMARPDL------TFDLVRPGIAVYGLS 261 N QA +A AR+ G+ ++ HL+NS A + RP F+ RPG+AVYGLS Sbjct 184 NAEQASGLRDAVALARKAGLSPQLVHLANSPAVLTRPRALVDGVPAFNATRPGVAVYGLS 243 Query 262 PVPALGDMGLVPAMTVKCAVALVKSIRAGEGVSYGHTWIAPRDTNLALLPIGYADGVFRS 321 P+ A D GL+PAMT+ V LVK I+AG+GVSYGH ++AP DT LALLPIGYADG+ RS Sbjct 244 PI-AGRDFGLIPAMTLTARVGLVKRIQAGDGVSYGHDFVAPTDTTLALLPIGYADGLPRS 302 Query 322 LGGRLEVLINGRRCPGVGRICMDQFMVDLGPGPLDVAEGDEAILFGPGIRGEPTAQDWAD 381 L G+ EV+I GRR PGVGR+CMDQ +VDLGPG V EGD A LFG G GE T DWA Sbjct 303 LAGKFEVVIGGRRYPGVGRVCMDQVLVDLGPGRPRVREGDIATLFGSGKDGEQTVDDWAK 362 Query 382 LVGTIHYEVVTSPRGRI 398 GTI+YE+VT RGR+ Sbjct 363 AAGTINYEIVTQIRGRV 379 >gi|256380541|ref|YP_003104201.1| alanine racemase [Actinosynnema mirum DSM 43827] gi|255924844|gb|ACU40355.1| alanine racemase [Actinosynnema mirum DSM 43827] Length=388 Score = 328 bits (840), Expect = 1e-87, Method: Compositional matrix adjust. Identities = 192/369 (53%), Positives = 241/369 (66%), Gaps = 9/369 (2%) Query 36 AEAMVDLGAIEHNVRVLREHAGHAQLMAVVKADGYGHGATRVAQTALGAGAAELGVATVD 95 AE ++DL + HN L A A+LMAVVKADGYGHGA VA+TALG+GA LG ++ Sbjct 28 AEVVIDLDNLRHNTAYLAARAPGAELMAVVKADGYGHGAVEVARTALGSGATWLGSCSIP 87 Query 96 EALALRADGITAPVLAWLHPPGIDFGPALLADVQVAVSSLRQLDELLHAVRRTGRTATVT 155 EALALRA GITAPVLAWL P DF PA+ V + +S+ R L+ A RR GR A V Sbjct 88 EALALRAGGITAPVLAWLDTPDTDFAPAIAEGVDLGLSTPRALESAAAAARRAGRRARVH 147 Query 156 VKVDTGLNRNGVGPAQFPAMLTALRQAMAEDAVRLRGLMSHMVYADKPDDSINDVQAQRF 215 +K+DTGL+RNG ++ A + A A V + + SH+ AD+P D QA+RF Sbjct 148 LKIDTGLSRNGCPADEWEAF---VELAAATPEVEVHAIWSHLACADEPGHPATDAQAERF 204 Query 216 TAFLAQAREQGVRFEVAHLSNSSATMARPDLTFDLVRPGIAVYGLSPVPALGDMGLVPAM 275 A G+ + HL+NS+A + RPDL FDLVRPGIA+YGL+PVP D L P M Sbjct 205 DDAYRAALRAGLDPK-RHLANSAALLTRPDLHFDLVRPGIALYGLNPVPDEHD--LRPVM 261 Query 276 TVKCAVALVKSIRAGEGVSYGHTWIAPRDTNLALLPIGYADGVFRSLGGRLEVLINGRRC 335 T + +V K IRAGE VSYG TW A DT+LAL+P+GYADGV R+L R+ V + GRR Sbjct 262 TFRSSVVRTKRIRAGESVSYGLTWTAKSDTSLALVPVGYADGVPRALSNRMHVRLAGRRR 321 Query 336 PGVGRICMDQFMVDLGPGPLDVAEGDEAILFGPGIRGEPTAQDWADLVGTIHYEVVTS-P 394 P VGR+CMDQ +VD G ++AEGDE +LFG G+ G PTA++WAD GTI YE+VT Sbjct 322 PVVGRVCMDQVVVDCGDD--EIAEGDEVVLFGTGVDGGPTAREWADTTGTIDYEIVTGMH 379 Query 395 RGRITRTYR 403 R R+ RTYR Sbjct 380 RPRVVRTYR 388 >gi|290958110|ref|YP_003489292.1| alanine racemase [Streptomyces scabiei 87.22] gi|260647636|emb|CBG70741.1| putative alanine racemase [Streptomyces scabiei 87.22] Length=386 Score = 327 bits (838), Expect = 2e-87, Method: Compositional matrix adjust. Identities = 193/379 (51%), Positives = 240/379 (64%), Gaps = 6/379 (1%) Query 27 PISQTPGLLAEAMVDLGAIEHNVRVLREHAGHAQLMAVVKADGYGHGATRVAQTALGAGA 86 P+ P L A A +DL A+ NVR LR A A+LMAVVK+D YGHGA R A+ A+ AGA Sbjct 6 PLRSAP-LRARAEIDLDALRANVRTLRARAAGAELMAVVKSDAYGHGAVRCARAAVEAGA 64 Query 87 AELGVATVDEALALRADGITAPVLAWLHPPGIDFGPALLADVQVAVSSLRQLDELLHAVR 146 LG AT +EALALRA G++ ++ WL PG + A+ AD+ VAVS L L E+ A R Sbjct 65 TWLGTATPEEALALRAAGLSGRLMCWLWAPGGPWREAVEADIDVAVSGLWALREVTDAAR 124 Query 147 RTGRTATVTVKVDTGLNRNGVGPAQFPAMLTALRQAMAEDAVRLRGLMSHMVYADKPDDS 206 G A V +K DTGL RNG P +P ++T +A AE V++ GL SH AD+P Sbjct 125 AAGLRARVQLKADTGLGRNGCAPGDWPELVTEALRAEAEGLVKVTGLWSHFACADEPGHP 184 Query 207 INDVQAQRFTAFLAQAREQGVRFEVAHLSNSSATMARPDLTFDLVRPGIAVYGLSPVPAL 266 + Q RF +A A EQGVR EV H++NS AT+ PD FDLVR GIAVYG+SP P L Sbjct 185 SIEAQLTRFRDMIAHAEEQGVRPEVRHIANSPATLTLPDARFDLVRTGIAVYGVSPSPEL 244 Query 267 G---DMGLVPAMTVKCAVALVKSIRAGEGVSYGHTWIAPRDTNLALLPIGYADGVFRSLG 323 G D+GL P M + ++ALVK + AG GVSYGH ++ P T L L+P+GYADGV R Sbjct 245 GSAADLGLRPVMRLSASLALVKHVPAGHGVSYGHHYVTPGATTLGLVPVGYADGVPRHAS 304 Query 324 GRLEVLINGRRCPGVGRICMDQFMVDLGPGPLDVAEGDEAILFGPGIRGEPTAQDWADLV 383 G VL+ G+ GR+ MDQF+VDLG G VA GDE +LFG G RGEPTA+DWA Sbjct 305 GTGPVLVGGKWRTVAGRVAMDQFVVDLG-GDEPVA-GDEVVLFGAGDRGEPTAEDWAQAA 362 Query 384 GTIHYEVVTSPRGRITRTY 402 GTI YE+VT R+ R Y Sbjct 363 GTIAYEIVTRIGTRVPRVY 381 >gi|296392787|ref|YP_003657671.1| alanine racemase [Segniliparus rotundus DSM 44985] gi|296179934|gb|ADG96840.1| alanine racemase [Segniliparus rotundus DSM 44985] Length=397 Score = 326 bits (836), Expect = 4e-87, Method: Compositional matrix adjust. Identities = 188/374 (51%), Positives = 244/374 (66%), Gaps = 14/374 (3%) Query 37 EAMVDLGAIEHNVRVLREHAGHAQLMAVVKADGYGHGATRVAQTALGAGAAELGVATVDE 96 +A VD AI HNVR+L + + AQ++AV+KA+ YGHGA VA+TAL AGAA++GVAT+ E Sbjct 6 QATVDHHAIAHNVRLLAQASAPAQVIAVLKANAYGHGAVPVARTALAAGAAQIGVATLAE 65 Query 97 ALALRADGITAPVLAWLHPPGID-----FGPALLADVQVAVSSLRQLDELLHAVRRTGRT 151 A LR GI AP++AWLH D F A+ + +++ VS+ Q+ + A R + Sbjct 66 AFELRQGGIEAPIIAWLHAFDPDEAVAVFAEAIASGIELGVSTSSQVRAVAEAALRADQL 125 Query 152 ATVTVKVDTGLNRNGVGPAQFPAMLTALRQAMAEDAVRLRGLMSHMVYADKPDDSINDVQ 211 A V VKVDTGLNR G ++ L A A AV++RG+ SH+ AD+P+ N Q Sbjct 126 AVVAVKVDTGLNRGGFARGEWRKAFADLANAEAAGAVQVRGVFSHLANADRPEYRTNAEQ 185 Query 212 AQRFTAFLAQAREQGVRFEVAHLSNSSATMARPDL------TFDLVRPGIAVYGLSPVPA 265 A+ ++ AR G+ E+ HL+NS A + RP F+ RPG+AVYGLSP+ Sbjct 186 ARSLREAVSFARAAGLAPELVHLANSPAVLTRPKALVNELPVFNATRPGVAVYGLSPI-- 243 Query 266 LG-DMGLVPAMTVKCAVALVKSIRAGEGVSYGHTWIAPRDTNLALLPIGYADGVFRSLGG 324 +G D GL+PAMT+ V L K I AG+GVSYGH ++A DT LALLPIGYADG+ R+L G Sbjct 244 MGRDFGLIPAMTLTARVGLTKRIHAGDGVSYGHDFVAASDTTLALLPIGYADGLQRALAG 303 Query 325 RLEVLINGRRCPGVGRICMDQFMVDLGPGPLDVAEGDEAILFGPGIRGEPTAQDWADLVG 384 + EV I GRR PGVGR+CMDQ +VDLGPG V EGD A+LFGPG GE TA DWA G Sbjct 304 KFEVSIGGRRYPGVGRVCMDQVLVDLGPGEPKVREGDTAVLFGPGSDGEQTADDWARAAG 363 Query 385 TIHYEVVTSPRGRI 398 TI+YE+VT RGR+ Sbjct 364 TINYEIVTQLRGRV 377 >gi|330470100|ref|YP_004407843.1| alanine racemase [Verrucosispora maris AB-18-032] gi|328813071|gb|AEB47243.1| alanine racemase [Verrucosispora maris AB-18-032] Length=372 Score = 323 bits (829), Expect = 2e-86, Method: Compositional matrix adjust. Identities = 198/368 (54%), Positives = 235/368 (64%), Gaps = 5/368 (1%) Query 36 AEAMVDLGAIEHNVRVLREHAGHAQLMAVVKADGYGHGATRVAQTALGAGAAELGVATVD 95 AE VDL AI NV +R A+LMAVVKADGYGHG A+ AL AGA LGV T+D Sbjct 4 AEVRVDLDAIRENVDRMRA-GTSAELMAVVKADGYGHGMVPAARAALDAGATWLGVCTLD 62 Query 96 EALALRADGITAPVLAWLHPPGIDFGPALLADVQVAVSSLRQLDELLHAVRRTGRTATVT 155 EALALRA GI APVLAWL PG+ + ADV + V+SL QLDE + A RR R A V Sbjct 63 EALALRAAGIDAPVLAWLLAPGLPLHTGVAADVDLGVASLPQLDEAVEASRRAQRPARVH 122 Query 156 VKVDTGLNRNGVGPAQFPAMLTALRQAMAEDAVRLRGLMSHMVYADKPDDSINDVQAQRF 215 +K+DTGL+RNG A +PA+L A +A A+ V + G+ SH VYAD P D Q F Sbjct 123 LKIDTGLSRNGATVADWPALLDAAAKAQADGLVEVVGVWSHFVYADMPGHPTTDRQLAVF 182 Query 216 TAFLAQAREQGVRFEVAHLSNSSATMARPDLTFDLVRPGIAVYGLSPVPALGDMGLVPAM 275 LA G+R HL+NS+AT+ RPD FDLVRPG+AVYGLSPV A GL PAM Sbjct 183 HEGLAMVERAGLRPRYRHLANSAATLTRPDTHFDLVRPGLAVYGLSPV-AGETHGLRPAM 241 Query 276 TVKCAVALVKSIRAGEGVSYGHTWIAPRDTNLALLPIGYADGVFRSLGGRLEVLINGRRC 335 T + V L K + AG GVSYGHT+ RD NLA++P+GYADGV R V + GRR Sbjct 242 TARARVMLTKRVPAGTGVSYGHTYTTERDANLAVVPLGYADGVPRHASNTGPVQLGGRRR 301 Query 336 PGVGRICMDQFMVDLGPGPLDVAEGDEAILFGPGIRGEPTAQDWADLVGTIHYEVVTS-P 394 GR+CMDQF++D G P VA GD A LFG G GEPTA DWA+ VGTI+YE+VT Sbjct 302 TISGRVCMDQFVLDCGDDP--VAAGDVATLFGSGADGEPTADDWAEAVGTINYEIVTRFG 359 Query 395 RGRITRTY 402 R+ R Y Sbjct 360 SSRVPRVY 367 >gi|296130437|ref|YP_003637687.1| alanine racemase [Cellulomonas flavigena DSM 20109] gi|296022252|gb|ADG75488.1| alanine racemase [Cellulomonas flavigena DSM 20109] Length=410 Score = 323 bits (829), Expect = 2e-86, Method: Compositional matrix adjust. Identities = 198/376 (53%), Positives = 243/376 (65%), Gaps = 10/376 (2%) Query 36 AEAMVDLGAIEHNVRVLREHAGHAQLMAVVKADGYGHGATRVAQTALGAGAAELGVATVD 95 A A+VDLGA+ NVR L HA AQ+MAVVKAD YGHG A AL GA LG A V Sbjct 19 ARAVVDLGAVRGNVRALAAHAPTAQVMAVVKADAYGHGLVPSALAALEGGATWLGTAQVP 78 Query 96 EALALRADGIT-APVLAWLHPPGIDFGPALLADVQVAVSSLRQLDELLHAVRRTGRTATV 154 EAL LR G+T A +L WL+ PG A+ ADV ++V+S LD+++ A R GRTA V Sbjct 79 EALHLRRAGVTGARILTWLYAPGAPLREAVEADVDLSVASRWALDDVVAAAREAGRTARV 138 Query 155 TVKVDTGLNRNGVGPAQFPAMLTALRQAMAEDAVRLRGLMSHMVYADKPDDSINDVQAQR 214 +KVDTGL RNG+ PAQ P +LTA A AE VR+ G+ SH+ +AD PD ++ QA Sbjct 139 HLKVDTGLGRNGLVPAQLPEVLTAALAAEAEGVVRVVGVWSHLAFADAPDHAVVAQQAGV 198 Query 215 FTAFLAQAREQGVRFEVAHLSNSSATMARPDLTFDLVRPGIAVYGLSPVPALGD---MGL 271 F +A G R EV HL+NS+AT+ P L +DLVRPGIAVYGLSPVP LG GL Sbjct 199 FAEAVAAVEAAGARLEVRHLANSAATLTSPALHWDLVRPGIAVYGLSPVPQLGGPERFGL 258 Query 272 VPAMTVKCAVALVKSIRAGEGVSYGHTWIAPRDTNLALLPIGYADGVFRSLGGRLE---- 327 VPAMT + +A VK + AG GVSYGH ++ P DT L ++P+GYADGV R G E Sbjct 259 VPAMTFEAQLATVKPVPAGSGVSYGHEYVVPHDTVLGVVPVGYADGVPRHASGSAERWGG 318 Query 328 -VLINGRRCPGVGRICMDQFMVDLGPGPLDVAEGDEAILFGPGIRGEPTAQDWADLVGTI 386 V + GRR GR+CMDQ ++DLGPG + A GD +L+G G G PTAQDWAD+ GTI Sbjct 319 PVQVGGRRLGVAGRVCMDQVVLDLGPGATESA-GDRVVLWGDGRDGGPTAQDWADVAGTI 377 Query 387 HYEVVTSPRGRITRTY 402 YE+VT R+ RTY Sbjct 378 SYELVTRLGARVPRTY 393 >gi|262201658|ref|YP_003272866.1| alanine racemase [Gordonia bronchialis DSM 43247] gi|262085005|gb|ACY20973.1| alanine racemase [Gordonia bronchialis DSM 43247] Length=381 Score = 323 bits (827), Expect = 4e-86, Method: Compositional matrix adjust. Identities = 195/365 (54%), Positives = 241/365 (67%), Gaps = 2/365 (0%) Query 38 AMVDLGAIEHNVRVLREHAGHAQLMAVVKADGYGHGATRVAQTALGAGAAELGVATVDEA 97 A VDL AI HN+ VLRE + ++AVVKAD YGHGA VA+ AL AGAAELGVA + E Sbjct 8 ATVDLDAIAHNISVLRETS-RTDVLAVVKADAYGHGAVPVARAALAAGAAELGVAVIGEG 66 Query 98 LALRADGITAPVLAWLHPPGIDFGPALLADVQVAVSSLRQLDELLHAVRRTGRTATVTVK 157 LALRA GI A + WLH DF A+ AD+ +A+SS RQL ++ A R G TAT +VK Sbjct 67 LALRAAGIDAHITTWLHTNSADFAAAIAADLDLALSSRRQLAAVVAAARSAGTTATASVK 126 Query 158 VDTGLNRNGVGPAQFPAMLTALRQAMAEDAVRLRGLMSHMVYADKPDDSINDVQAQRFTA 217 +DTGL R+GV P ++ L +A+AE AV++R LM H+ D+PD +N QA R Sbjct 127 LDTGLGRSGVAPDEWADFADDLAKAVAEGAVQVRALMCHLARGDEPDHPLNSQQAARLDD 186 Query 218 FLAQAREQGVRFEVAHLSNSSATMARPDLTFDLVRPGIAVYGLSPVPALGDMGLVPAMTV 277 A G E+ H++NS A + RPDL DLVRPGIA+YG +P+P D GL+PAMT+ Sbjct 187 ARADLVRVGAAPEIMHIANSPAALTRPDLARDLVRPGIAIYGGAPIPGR-DFGLIPAMTL 245 Query 278 KCAVALVKSIRAGEGVSYGHTWIAPRDTNLALLPIGYADGVFRSLGGRLEVLINGRRCPG 337 + VALVK I AG+GVSYGHTW+A RDT +A++P GYADGV R GRL + I R Sbjct 246 RAQVALVKRIAAGQGVSYGHTWVADRDTTIAVIPAGYADGVPRPASGRLRIRIGDRVVDQ 305 Query 338 VGRICMDQFMVDLGPGPLDVAEGDEAILFGPGIRGEPTAQDWADLVGTIHYEVVTSPRGR 397 VGRICMDQF++DLGP +AEGD A LFG G G AQDWAD VGTI YE+V+ R Sbjct 306 VGRICMDQFVIDLGPEAGGIAEGDWAELFGTGADGGQRAQDWADAVGTIDYEIVSGIGAR 365 Query 398 ITRTY 402 R Y Sbjct 366 AVREY 370 >gi|297159652|gb|ADI09364.1| alanine racemase [Streptomyces bingchenggensis BCW-1] Length=384 Score = 323 bits (827), Expect = 4e-86, Method: Compositional matrix adjust. Identities = 192/378 (51%), Positives = 242/378 (65%), Gaps = 6/378 (1%) Query 28 ISQTPGLLAEAMVDLGAIEHNVRVLREHAGHAQLMAVVKADGYGHGATRVAQTALGAGAA 87 +++TP + A A+VDL A+ NVR LR A A+LMAVVK+D YGHGA A+ A AGA+ Sbjct 1 MNETP-MRARAVVDLAALRANVRALRAAAPGAELMAVVKSDAYGHGAVPCARAAREAGAS 59 Query 88 ELGVATVDEALALRADGITAPVLAWLHPPGIDFGPALLADVQVAVSSLRQLDELLHAVRR 147 LG AT +EALALRA G T +L WL PG + A+ ADV V++S++ L E + A R Sbjct 60 WLGTATPEEALALRAAGDTGRLLCWLWTPGGPWREAIEADVDVSLSAMWALREAVAAARE 119 Query 148 TGRTATVTVKVDTGLNRNGVGPAQFPAMLTALRQAMAEDAVRLRGLMSHMVYADKPDDSI 207 GRTA V +K DTGL RNG PA +P ++ A R A AE V + GL SH AD+P Sbjct 120 CGRTARVQLKADTGLGRNGCPPADWPELVAAARAAEAEGTVTVTGLWSHFACADEPGHPS 179 Query 208 NDVQAQRFTAFLAQAREQGVRFEVAHLSNSSATMARPDLTFDLVRPGIAVYGLSPVPAL- 266 Q + F LAQA + G+R EV H++NS AT+ P+ FDLVR GIAVYG+SP P + Sbjct 180 IAAQLKVFRTLLAQAEQAGLRPEVRHIANSPATLTLPESHFDLVRTGIAVYGISPSPEVG 239 Query 267 --GDMGLVPAMTVKCAVALVKSIRAGEGVSYGHTWIAPRDTNLALLPIGYADGVFRSLGG 324 GD GL P MT+ ++A VK + G GVSYGH +I P T LAL+P+GYADGV R G Sbjct 240 HPGDFGLRPVMTLVASLASVKRVPGGHGVSYGHRYITPGPTTLALVPVGYADGVPRHASG 299 Query 325 RLEVLINGRRCPGVGRICMDQFMVDLGPGPLDVAEGDEAILFGPGIRGEPTAQDWADLVG 384 VL+ G+ G + MDQF+VDLG A GDEA+LFGPG RGEPTA+DWA VG Sbjct 300 TGPVLVAGKWRTVAGTVAMDQFVVDLGGD--AAAPGDEAVLFGPGDRGEPTAEDWARAVG 357 Query 385 TIHYEVVTSPRGRITRTY 402 +I YE+VT R+ R Y Sbjct 358 SIAYEIVTRISARVPRVY 375 Lambda K H 0.320 0.136 0.405 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 813232817712 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40