BLASTP 2.2.25+


Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.



Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
           15,229,318 sequences; 5,219,829,388 total letters



Query= Rv3425

Length=176
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

gi|57117105|ref|YP_177971.1|  PPE family protein [Mycobacterium t...   359    8e-98
gi|289449124|ref|ZP_06438868.1|  PPE family protein [Mycobacteriu...   357    4e-97
gi|148824631|ref|YP_001289385.1|  hypothetical protein TBFG_13458...   320    6e-86
gi|306777764|ref|ZP_07416101.1|  putative PPE family protein [Myc...   310    6e-83
gi|31794606|ref|NP_857099.1|  PPE family protein [Mycobacterium b...   300    4e-80
gi|289444917|ref|ZP_06434661.1|  PPE family protein [Mycobacteriu...   278    2e-73
gi|289752144|ref|ZP_06511522.1|  PPE family protein [Mycobacteriu...   276    7e-73
gi|298526912|ref|ZP_07014321.1|  PPE family protein [Mycobacteriu...   254    3e-66
gi|289747262|ref|ZP_06506640.1|  PPE family protein [Mycobacteriu...   249    7e-65
gi|289763608|ref|ZP_06522986.1|  PPE family protein [Mycobacteriu...   249    1e-64
gi|289445029|ref|ZP_06434773.1|  PPE family protein [Mycobacteriu...   247    4e-64
gi|253800472|ref|YP_003033473.1|  PPE family protein [Mycobacteri...   245    2e-63
gi|289444916|ref|ZP_06434660.1|  PPE family protein [Mycobacteriu...   243    6e-63
gi|308232462|ref|ZP_07416100.2|  PPE family protein [Mycobacteriu...   242    1e-62
gi|15843022|ref|NP_338059.1|  PPE family protein [Mycobacterium t...   242    1e-62
gi|254552530|ref|ZP_05142977.1|  PPE family protein [Mycobacteriu...   241    3e-62
gi|148824632|ref|YP_001289386.1|  PPE family protein [Mycobacteri...   238    2e-61
gi|167968687|ref|ZP_02550964.1|  PPE family protein [Mycobacteriu...   234    4e-60
gi|167968681|ref|ZP_02550958.1|  PPE family protein [Mycobacteriu...   234    5e-60
gi|339299856|gb|AEJ51966.1|  PPE family protein [Mycobacterium tu...   202    2e-50
gi|323717911|gb|EGB27100.1|  PPE family protein [Mycobacterium tu...   195    2e-48
gi|289571657|ref|ZP_06451884.1|  PPE family protein [Mycobacteriu...   190    9e-47
gi|148824635|ref|YP_001289389.1|  PPE family protein [Mycobacteri...   188    2e-46
gi|289759584|ref|ZP_06518962.1|  PPE family protein [Mycobacteriu...   179    1e-43
gi|294995796|ref|ZP_06801487.1|  PPE family protein [Mycobacteriu...   167    8e-40
gi|57117106|ref|YP_177972.1|  PPE family protein [Mycobacterium t...   161    3e-38
gi|289747254|ref|ZP_06506632.1|  PPE family protein [Mycobacteriu...   154    6e-36
gi|342861517|ref|ZP_08718164.1|  PPE family protein [Mycobacteriu...   105    2e-21
gi|254820680|ref|ZP_05225681.1|  PPE family protein [Mycobacteriu...   104    4e-21
gi|254776707|ref|ZP_05218223.1|  PPE family protein [Mycobacteriu...   103    1e-20
gi|41409517|ref|NP_962353.1|  hypothetical protein MAP3419c [Myco...   102    2e-20
gi|342861033|ref|ZP_08717682.1|  PPE family protein [Mycobacteriu...  99.4    2e-19
gi|296167733|ref|ZP_06849950.1|  PPE family protein [Mycobacteriu...  97.8    6e-19
gi|342859619|ref|ZP_08716272.1|  PPE family protein [Mycobacteriu...  94.4    7e-18
gi|333989927|ref|YP_004522541.1|  PPE family protein PPE51_2 [Myc...  92.0    3e-17
gi|254820679|ref|ZP_05225680.1|  hypothetical protein MintA_12161...  90.9    7e-17
gi|183980225|ref|YP_001848516.1|  PPE family protein, PPE51_2 [My...  90.1    1e-16
gi|296168892|ref|ZP_06850562.1|  PPE family protein [Mycobacteriu...  90.1    1e-16
gi|240171260|ref|ZP_04749919.1|  PPE family protein [Mycobacteriu...  89.0    2e-16
gi|158667960|gb|ABW76444.1|  PPE family protein [Mycobacterium av...  87.8    5e-16
gi|254820292|ref|ZP_05225293.1|  PPE family protein [Mycobacteriu...  87.4    7e-16
gi|212596584|gb|ACJ35590.1|  PPE23 [Mycobacterium intracellulare ...  87.4    7e-16
gi|296164212|ref|ZP_06846808.1|  PPE family protein [Mycobacteriu...  87.4    7e-16
gi|212596187|gb|ACJ35558.1|  PPE35 [Mycobacterium avium subsp. av...  85.9    2e-15
gi|41409518|ref|NP_962354.1|  hypothetical protein MAP3420c [Myco...  85.9    2e-15
gi|118462419|ref|YP_883414.1|  PPE family protein [Mycobacterium ...  85.9    2e-15
gi|254776708|ref|ZP_05218224.1|  hypothetical protein MaviaA2_188...  85.9    2e-15
gi|183981917|ref|YP_001850208.1|  PPE family protein [Mycobacteri...  85.5    3e-15
gi|342861519|ref|ZP_08718166.1|  hypothetical protein MCOL_21641 ...  84.3    5e-15
gi|212596524|gb|ACJ35585.1|  PPE16 [Mycobacterium intracellulare ...  83.6    1e-14


>gi|57117105|ref|YP_177971.1| PPE family protein [Mycobacterium tuberculosis H37Rv]
 gi|148663289|ref|YP_001284812.1| PPE family protein [Mycobacterium tuberculosis H37Ra]
 gi|306973883|ref|ZP_07486544.1| putative PPE family protein [Mycobacterium tuberculosis SUMu010]
 6 more sequence titles
 
gi|307081595|ref|ZP_07490765.1| putative PPE family protein [Mycobacterium tuberculosis SUMu011]
 gi|2496465|sp|Q50703.1|PPE57_MYCTU RecName: Full=Uncharacterized PPE family protein PPE57
 gi|41352786|emb|CAE55596.1| PPE FAMILY PROTEIN [Mycobacterium tuberculosis H37Rv]
 gi|148507441|gb|ABQ75250.1| PPE family protein [Mycobacterium tuberculosis H37Ra]
 gi|308356769|gb|EFP45620.1| putative PPE family protein [Mycobacterium tuberculosis SUMu010]
 gi|308360719|gb|EFP49570.1| putative PPE family protein [Mycobacterium tuberculosis SUMu011]
Length=176

 Score =  359 bits (922),  Expect = 8e-98, Method: Compositional matrix adjust.
 Identities = 176/176 (100%), Positives = 176/176 (100%), Gaps = 0/176 (0%)

Query  1    MHPMIPAEYISNIIYEGPGADSLFFASGQLRELAYSVETTAESLEDELDELDENWKGSSS  60
            MHPMIPAEYISNIIYEGPGADSLFFASGQLRELAYSVETTAESLEDELDELDENWKGSSS
Sbjct  1    MHPMIPAEYISNIIYEGPGADSLFFASGQLRELAYSVETTAESLEDELDELDENWKGSSS  60

Query  61   DLLADAVERYLQWLSKHSSQLKHAAWVINGLANAYNDTRRKVVPPEEIAANREERRRLIA  120
            DLLADAVERYLQWLSKHSSQLKHAAWVINGLANAYNDTRRKVVPPEEIAANREERRRLIA
Sbjct  61   DLLADAVERYLQWLSKHSSQLKHAAWVINGLANAYNDTRRKVVPPEEIAANREERRRLIA  120

Query  121  SNVAGVNTPAIADLDAQYDQYRARNVAVMNAYVSWTRSALSDLPRWREPPQIYRGG  176
            SNVAGVNTPAIADLDAQYDQYRARNVAVMNAYVSWTRSALSDLPRWREPPQIYRGG
Sbjct  121  SNVAGVNTPAIADLDAQYDQYRARNVAVMNAYVSWTRSALSDLPRWREPPQIYRGG  176


>gi|289449124|ref|ZP_06438868.1| PPE family protein [Mycobacterium tuberculosis CPHL_A]
 gi|289576157|ref|ZP_06456384.1| PPE family protein [Mycobacterium tuberculosis K85]
 gi|298526907|ref|ZP_07014316.1| PPE family protein [Mycobacterium tuberculosis 94_M4241A]
 gi|339633430|ref|YP_004725072.1| PPE family protein [Mycobacterium africanum GM041182]
 gi|289422082|gb|EFD19283.1| PPE family protein [Mycobacterium tuberculosis CPHL_A]
 gi|289540588|gb|EFD45166.1| PPE family protein [Mycobacterium tuberculosis K85]
 gi|298496701|gb|EFI31995.1| PPE family protein [Mycobacterium tuberculosis 94_M4241A]
 gi|339332786|emb|CCC28508.1| PPE family protein [Mycobacterium africanum GM041182]
Length=176

 Score =  357 bits (916),  Expect = 4e-97, Method: Compositional matrix adjust.
 Identities = 175/176 (99%), Positives = 175/176 (99%), Gaps = 0/176 (0%)

Query  1    MHPMIPAEYISNIIYEGPGADSLFFASGQLRELAYSVETTAESLEDELDELDENWKGSSS  60
            MHPMIPAEYISNIIYEGPGADSLFFASGQLRELAYSVETTAESLEDELDELDENWKGSSS
Sbjct  1    MHPMIPAEYISNIIYEGPGADSLFFASGQLRELAYSVETTAESLEDELDELDENWKGSSS  60

Query  61   DLLADAVERYLQWLSKHSSQLKHAAWVINGLANAYNDTRRKVVPPEEIAANREERRRLIA  120
            DLLADAVERYLQWLSKHSSQLKHAAWVINGLANAYNDTRRKVVPPEEIAANREERRRLIA
Sbjct  61   DLLADAVERYLQWLSKHSSQLKHAAWVINGLANAYNDTRRKVVPPEEIAANREERRRLIA  120

Query  121  SNVAGVNTPAIADLDAQYDQYRARNVAVMNAYVSWTRSALSDLPRWREPPQIYRGG  176
            SNVAGVN PAIADLDAQYDQYRARNVAVMNAYVSWTRSALSDLPRWREPPQIYRGG
Sbjct  121  SNVAGVNAPAIADLDAQYDQYRARNVAVMNAYVSWTRSALSDLPRWREPPQIYRGG  176


>gi|148824631|ref|YP_001289385.1| hypothetical protein TBFG_13458 [Mycobacterium tuberculosis F11]
 gi|148723158|gb|ABR07783.1| hypothetical protein TBFG_13458 [Mycobacterium tuberculosis F11]
Length=176

 Score =  320 bits (819),  Expect = 6e-86, Method: Compositional matrix adjust.
 Identities = 158/176 (90%), Positives = 162/176 (93%), Gaps = 0/176 (0%)

Query  1    MHPMIPAEYISNIIYEGPGADSLFFASGQLRELAYSVETTAESLEDELDELDENWKGSSS  60
            MHPMIPAEYISNIIYEGPGADSL  A+ QLR +  S   TA+SL D L EL ENWKGSSS
Sbjct  1    MHPMIPAEYISNIIYEGPGADSLSAAAEQLRLMYNSANMTAKSLTDRLGELQENWKGSSS  60

Query  61   DLLADAVERYLQWLSKHSSQLKHAAWVINGLANAYNDTRRKVVPPEEIAANREERRRLIA  120
            DL+ADAVERYLQWLSKHSSQLKHAAWVINGLANAYNDTRRKVVPPEEIAANREERRRLIA
Sbjct  61   DLMADAVERYLQWLSKHSSQLKHAAWVINGLANAYNDTRRKVVPPEEIAANREERRRLIA  120

Query  121  SNVAGVNTPAIADLDAQYDQYRARNVAVMNAYVSWTRSALSDLPRWREPPQIYRGG  176
            SNVAGVN PAIADLDAQYDQYRARNVAVMNAYVSWTRSALSDLPRWREPPQIYRGG
Sbjct  121  SNVAGVNAPAIADLDAQYDQYRARNVAVMNAYVSWTRSALSDLPRWREPPQIYRGG  176


>gi|306777764|ref|ZP_07416101.1| putative PPE family protein [Mycobacterium tuberculosis SUMu001]
 gi|308213899|gb|EFO73298.1| putative PPE family protein [Mycobacterium tuberculosis SUMu001]
Length=153

 Score =  310 bits (794),  Expect = 6e-83, Method: Compositional matrix adjust.
 Identities = 153/153 (100%), Positives = 153/153 (100%), Gaps = 0/153 (0%)

Query  24   FFASGQLRELAYSVETTAESLEDELDELDENWKGSSSDLLADAVERYLQWLSKHSSQLKH  83
            FFASGQLRELAYSVETTAESLEDELDELDENWKGSSSDLLADAVERYLQWLSKHSSQLKH
Sbjct  1    FFASGQLRELAYSVETTAESLEDELDELDENWKGSSSDLLADAVERYLQWLSKHSSQLKH  60

Query  84   AAWVINGLANAYNDTRRKVVPPEEIAANREERRRLIASNVAGVNTPAIADLDAQYDQYRA  143
            AAWVINGLANAYNDTRRKVVPPEEIAANREERRRLIASNVAGVNTPAIADLDAQYDQYRA
Sbjct  61   AAWVINGLANAYNDTRRKVVPPEEIAANREERRRLIASNVAGVNTPAIADLDAQYDQYRA  120

Query  144  RNVAVMNAYVSWTRSALSDLPRWREPPQIYRGG  176
            RNVAVMNAYVSWTRSALSDLPRWREPPQIYRGG
Sbjct  121  RNVAVMNAYVSWTRSALSDLPRWREPPQIYRGG  153


>gi|31794606|ref|NP_857099.1| PPE family protein [Mycobacterium bovis AF2122/97]
 gi|121639350|ref|YP_979574.1| PPE family protein [Mycobacterium bovis BCG str. Pasteur 1173P2]
 gi|224991846|ref|YP_002646535.1| PPE family protein [Mycobacterium bovis BCG str. Tokyo 172]
 gi|31620203|emb|CAD95646.1| PPE FAMILY PROTEIN [Mycobacterium bovis AF2122/97]
 gi|121494998|emb|CAL73484.1| PPE family protein [Mycobacterium bovis BCG str. Pasteur 1173P2]
 gi|224774961|dbj|BAH27767.1| PPE family protein [Mycobacterium bovis BCG str. Tokyo 172]
 gi|341603371|emb|CCC66052.1| PPE family protein [Mycobacterium bovis BCG str. Moreau RDJ]
Length=178

 Score =  300 bits (769),  Expect = 4e-80, Method: Compositional matrix adjust.
 Identities = 160/176 (91%), Positives = 164/176 (94%), Gaps = 0/176 (0%)

Query  1    MHPMIPAEYISNIIYEGPGADSLFFASGQLRELAYSVETTAESLEDELDELDENWKGSSS  60
            MHPMIPAEYISNIIYEGPGADSLFFASGQLRELAYSVETTAESLEDELDELDENWKGSSS
Sbjct  1    MHPMIPAEYISNIIYEGPGADSLFFASGQLRELAYSVETTAESLEDELDELDENWKGSSS  60

Query  61   DLLADAVERYLQWLSKHSSQLKHAAWVINGLANAYNDTRRKVVPPEEIAANREERRRLIA  120
            DLLADAVERYLQWLSKHSSQLKHAAWVINGLANAYNDTRRKVVPPEEIAANREE  RLIA
Sbjct  61   DLLADAVERYLQWLSKHSSQLKHAAWVINGLANAYNDTRRKVVPPEEIAANREEVHRLIA  120

Query  121  SNVAGVNTPAIADLDAQYDQYRARNVAVMNAYVSWTRSALSDLPRWREPPQIYRGG  176
            SNVAGVNTPAIA LDAQY QYRA+N+AVMN Y S  R  L+ LPRW+EPPQIY GG
Sbjct  121  SNVAGVNTPAIAGLDAQYQQYRAQNIAVMNDYQSTARFILAYLPRWQEPPQIYGGG  176


>gi|289444917|ref|ZP_06434661.1| PPE family protein [Mycobacterium tuberculosis T46]
 gi|289571650|ref|ZP_06451877.1| PPE family protein [Mycobacterium tuberculosis T17]
 gi|289755554|ref|ZP_06514932.1| PPE family protein [Mycobacterium tuberculosis EAS054]
 gi|289417836|gb|EFD15076.1| PPE family protein [Mycobacterium tuberculosis T46]
 gi|289545404|gb|EFD49052.1| PPE family protein [Mycobacterium tuberculosis T17]
 gi|289696141|gb|EFD63570.1| PPE family protein [Mycobacterium tuberculosis EAS054]
Length=176

 Score =  278 bits (712),  Expect = 2e-73, Method: Compositional matrix adjust.
 Identities = 140/176 (80%), Positives = 148/176 (85%), Gaps = 0/176 (0%)

Query  1    MHPMIPAEYISNIIYEGPGADSLFFASGQLRELAYSVETTAESLEDELDELDENWKGSSS  60
            MHPMIPAEYISNIIYEGPGADSL  A+ QLR +  S   TA+SL D L EL ENWKGSSS
Sbjct  1    MHPMIPAEYISNIIYEGPGADSLSAAAEQLRLMYNSANMTAKSLTDRLGELQENWKGSSS  60

Query  61   DLLADAVERYLQWLSKHSSQLKHAAWVINGLANAYNDTRRKVVPPEEIAANREERRRLIA  120
            DLLADA  RYL WL+KHS Q+   A+VI+ LA  Y +TR KVVPP  IA NREERRRLIA
Sbjct  61   DLLADAAGRYLDWLTKHSRQILETAYVIDFLAYVYEETRHKVVPPATIANNREERRRLIA  120

Query  121  SNVAGVNTPAIADLDAQYDQYRARNVAVMNAYVSWTRSALSDLPRWREPPQIYRGG  176
            SNVAGVNTPAIADLDAQYDQYRARNVAVMNAYVSWTRSALSDLPRWREPPQIYRGG
Sbjct  121  SNVAGVNTPAIADLDAQYDQYRARNVAVMNAYVSWTRSALSDLPRWREPPQIYRGG  176


>gi|289752144|ref|ZP_06511522.1| PPE family protein [Mycobacterium tuberculosis T92]
 gi|289692731|gb|EFD60160.1| PPE family protein [Mycobacterium tuberculosis T92]
Length=176

 Score =  276 bits (707),  Expect = 7e-73, Method: Compositional matrix adjust.
 Identities = 139/176 (79%), Positives = 147/176 (84%), Gaps = 0/176 (0%)

Query  1    MHPMIPAEYISNIIYEGPGADSLFFASGQLRELAYSVETTAESLEDELDELDENWKGSSS  60
            MHPMIPAEYISNIIYEGPGADSL  A+ QLR +  S   TA+SL D L EL ENWKGSSS
Sbjct  1    MHPMIPAEYISNIIYEGPGADSLSAAAEQLRLMYNSANMTAKSLTDRLGELQENWKGSSS  60

Query  61   DLLADAVERYLQWLSKHSSQLKHAAWVINGLANAYNDTRRKVVPPEEIAANREERRRLIA  120
            DLLADA  RYL WL+KHS Q+   A+VI+ LA  Y +TR KVVPP  IA NREERRRLIA
Sbjct  61   DLLADAAGRYLDWLTKHSRQILETAYVIDFLAYVYEETRHKVVPPATIANNREERRRLIA  120

Query  121  SNVAGVNTPAIADLDAQYDQYRARNVAVMNAYVSWTRSALSDLPRWREPPQIYRGG  176
            SNVAGVN PAIADLDAQYDQYRARNVAVMNAYVSWTRSALSDLPRWREPPQIYRGG
Sbjct  121  SNVAGVNAPAIADLDAQYDQYRARNVAVMNAYVSWTRSALSDLPRWREPPQIYRGG  176


>gi|298526912|ref|ZP_07014321.1| PPE family protein [Mycobacterium tuberculosis 94_M4241A]
 gi|298496706|gb|EFI32000.1| PPE family protein [Mycobacterium tuberculosis 94_M4241A]
Length=178

 Score =  254 bits (649),  Expect = 3e-66, Method: Compositional matrix adjust.
 Identities = 127/176 (73%), Positives = 140/176 (80%), Gaps = 0/176 (0%)

Query  1    MHPMIPAEYISNIIYEGPGADSLFFASGQLRELAYSVETTAESLEDELDELDENWKGSSS  60
            MHPMIPAEYISNIIYEGPGADSLFFA+ QLR +  S   TA+SL D L EL ENWKGSSS
Sbjct  1    MHPMIPAEYISNIIYEGPGADSLFFAAEQLRLMYNSANMTAKSLTDRLGELQENWKGSSS  60

Query  61   DLLADAVERYLQWLSKHSSQLKHAAWVINGLANAYNDTRRKVVPPEEIAANREERRRLIA  120
            DL+ADAVERYL WL+KHS Q+   A+VI+ LA  Y +TR KVVPP  IA NREE  RLIA
Sbjct  61   DLMADAVERYLDWLTKHSRQILETAYVIDFLAYVYEETRHKVVPPATIANNREEVHRLIA  120

Query  121  SNVAGVNTPAIADLDAQYDQYRARNVAVMNAYVSWTRSALSDLPRWREPPQIYRGG  176
            SNVAGVNTPAIA LDAQY QYRA+N+AVMN Y S  R  L+ LPRW+EPPQIY GG
Sbjct  121  SNVAGVNTPAIAGLDAQYQQYRAQNIAVMNDYQSTARFILAYLPRWQEPPQIYGGG  176


>gi|289747262|ref|ZP_06506640.1| PPE family protein [Mycobacterium tuberculosis 02_1987]
 gi|289759591|ref|ZP_06518969.1| PPE family protein [Mycobacterium tuberculosis T85]
 gi|294995793|ref|ZP_06801484.1| PPE family protein [Mycobacterium tuberculosis 210]
 gi|289687790|gb|EFD55278.1| PPE family protein [Mycobacterium tuberculosis 02_1987]
 gi|289715155|gb|EFD79167.1| PPE family protein [Mycobacterium tuberculosis T85]
 gi|326905275|gb|EGE52208.1| PPE family protein [Mycobacterium tuberculosis W-148]
Length=178

 Score =  249 bits (637),  Expect = 7e-65, Method: Compositional matrix adjust.
 Identities = 125/176 (72%), Positives = 138/176 (79%), Gaps = 0/176 (0%)

Query  1    MHPMIPAEYISNIIYEGPGADSLFFASGQLRELAYSVETTAESLEDELDELDENWKGSSS  60
            MHPMIPAEYISNIIYEGPGADSLFFA+ QLR +  S   TA+SL D L EL ENWKGSSS
Sbjct  1    MHPMIPAEYISNIIYEGPGADSLFFAAEQLRLMYNSANMTAKSLTDRLGELQENWKGSSS  60

Query  61   DLLADAVERYLQWLSKHSSQLKHAAWVINGLANAYNDTRRKVVPPEEIAANREERRRLIA  120
            DL+ADA  RYL WL+KHS Q+   A+VI+ LA  Y +TR KVVPP  IA NREE  RLIA
Sbjct  61   DLMADAAGRYLDWLTKHSRQILETAYVIDFLAYVYEETRHKVVPPATIANNREEVHRLIA  120

Query  121  SNVAGVNTPAIADLDAQYDQYRARNVAVMNAYVSWTRSALSDLPRWREPPQIYRGG  176
            SNVAGVNTPAIA LDAQY QYRA+N+AVMN Y S  R  L+ LPRW+EPPQIY GG
Sbjct  121  SNVAGVNTPAIAGLDAQYQQYRAQNIAVMNDYQSTARFILAYLPRWQEPPQIYGGG  176


>gi|289763608|ref|ZP_06522986.1| PPE family protein [Mycobacterium tuberculosis GM 1503]
 gi|289711114|gb|EFD75130.1| PPE family protein [Mycobacterium tuberculosis GM 1503]
Length=178

 Score =  249 bits (636),  Expect = 1e-64, Method: Compositional matrix adjust.
 Identities = 126/176 (72%), Positives = 139/176 (79%), Gaps = 0/176 (0%)

Query  1    MHPMIPAEYISNIIYEGPGADSLFFASGQLRELAYSVETTAESLEDELDELDENWKGSSS  60
            MHPMIPAEYISNIIYEGPGADSL  A+ QLR +  S   TA+SL D L EL ENWKGSSS
Sbjct  1    MHPMIPAEYISNIIYEGPGADSLSAAAEQLRLMYNSANMTAKSLTDRLGELQENWKGSSS  60

Query  61   DLLADAVERYLQWLSKHSSQLKHAAWVINGLANAYNDTRRKVVPPEEIAANREERRRLIA  120
            DL+ADAVERYLQWL+KHS Q+   A+VI+ LA  Y +TR KVVPP  IA NREE  RLIA
Sbjct  61   DLMADAVERYLQWLTKHSRQILETAYVIDFLAYVYEETRHKVVPPATIANNREEVHRLIA  120

Query  121  SNVAGVNTPAIADLDAQYDQYRARNVAVMNAYVSWTRSALSDLPRWREPPQIYRGG  176
            SNVAGVNTPAIA LDAQY QYRA+N+AVMN Y S  R  L+ LPRW+EPPQIY GG
Sbjct  121  SNVAGVNTPAIAGLDAQYQQYRAQNIAVMNDYQSTARFILAYLPRWQEPPQIYGGG  176


>gi|289445029|ref|ZP_06434773.1| PPE family protein [Mycobacterium tuberculosis T46]
 gi|289571661|ref|ZP_06451888.1| PPE family protein [Mycobacterium tuberculosis T17]
 gi|289752153|ref|ZP_06511531.1| PPE family protein [Mycobacterium tuberculosis T92]
 gi|289755561|ref|ZP_06514939.1| PPE family protein [Mycobacterium tuberculosis EAS054]
 gi|289417948|gb|EFD15188.1| PPE family protein [Mycobacterium tuberculosis T46]
 gi|289545415|gb|EFD49063.1| PPE family protein [Mycobacterium tuberculosis T17]
 gi|289692740|gb|EFD60169.1| PPE family protein [Mycobacterium tuberculosis T92]
 gi|289696148|gb|EFD63577.1| PPE family protein [Mycobacterium tuberculosis EAS054]
Length=178

 Score =  247 bits (631),  Expect = 4e-64, Method: Compositional matrix adjust.
 Identities = 126/176 (72%), Positives = 138/176 (79%), Gaps = 0/176 (0%)

Query  1    MHPMIPAEYISNIIYEGPGADSLFFASGQLRELAYSVETTAESLEDELDELDENWKGSSS  60
            MHPMIPAEYISNIIYEGPGADSL  A+ QLR +  S   TA+SL D L EL ENWKGSSS
Sbjct  1    MHPMIPAEYISNIIYEGPGADSLSAAAEQLRLMYNSANMTAKSLTDRLGELQENWKGSSS  60

Query  61   DLLADAVERYLQWLSKHSSQLKHAAWVINGLANAYNDTRRKVVPPEEIAANREERRRLIA  120
            DLLADA  RYL WL+KHS Q+   A+VI+ LA  Y +TR KVVPP  IA NREE  RLIA
Sbjct  61   DLLADAAGRYLDWLTKHSRQILETAYVIDFLAYVYEETRHKVVPPATIANNREEVHRLIA  120

Query  121  SNVAGVNTPAIADLDAQYDQYRARNVAVMNAYVSWTRSALSDLPRWREPPQIYRGG  176
            SNVAGVNTPAIADLDAQYDQYRA+N+AVMN Y S  R  L+ LPRW+EPPQIY GG
Sbjct  121  SNVAGVNTPAIADLDAQYDQYRAQNIAVMNDYQSTARFILAYLPRWQEPPQIYGGG  176


>gi|253800472|ref|YP_003033473.1| PPE family protein [Mycobacterium tuberculosis KZN 1435]
 gi|289555700|ref|ZP_06444910.1| PPE family protein [Mycobacterium tuberculosis KZN 605]
 gi|297636086|ref|ZP_06953866.1| PPE family protein [Mycobacterium tuberculosis KZN 4207]
 6 more sequence titles
 
gi|297733086|ref|ZP_06962204.1| PPE family protein [Mycobacterium tuberculosis KZN R506]
 gi|313660417|ref|ZP_07817297.1| PPE family protein [Mycobacterium tuberculosis KZN V2475]
 gi|253321975|gb|ACT26578.1| PPE family protein [Mycobacterium tuberculosis KZN 1435]
 gi|289440332|gb|EFD22825.1| PPE family protein [Mycobacterium tuberculosis KZN 605]
 gi|328460204|gb|AEB05627.1| PPE family protein [Mycobacterium tuberculosis KZN 4207]
 gi|344221265|gb|AEN01896.1| PPE family protein [Mycobacterium tuberculosis CTRI-2]
Length=178

 Score =  245 bits (625),  Expect = 2e-63, Method: Compositional matrix adjust.
 Identities = 124/176 (71%), Positives = 137/176 (78%), Gaps = 0/176 (0%)

Query  1    MHPMIPAEYISNIIYEGPGADSLFFASGQLRELAYSVETTAESLEDELDELDENWKGSSS  60
            MHPMIPAEYISNIIYEGPGADSL  A+ QLR +  S   TA+SL D L EL ENWKGSSS
Sbjct  1    MHPMIPAEYISNIIYEGPGADSLSAAAEQLRLMYNSANMTAKSLTDRLGELQENWKGSSS  60

Query  61   DLLADAVERYLQWLSKHSSQLKHAAWVINGLANAYNDTRRKVVPPEEIAANREERRRLIA  120
            DL+ADA  RYL WL+KHS Q+   A+VI+ LA  Y +TR KVVPP  IA NREE  RLIA
Sbjct  61   DLMADAAGRYLDWLTKHSRQILETAYVIDFLAYVYEETRHKVVPPATIANNREEVHRLIA  120

Query  121  SNVAGVNTPAIADLDAQYDQYRARNVAVMNAYVSWTRSALSDLPRWREPPQIYRGG  176
            SNVAGVNTPAIA LDAQY QYRA+N+AVMN Y S  R  L+ LPRW+EPPQIYRGG
Sbjct  121  SNVAGVNTPAIAGLDAQYQQYRAQNIAVMNDYQSTARFILAYLPRWQEPPQIYRGG  176


>gi|289444916|ref|ZP_06434660.1| PPE family protein [Mycobacterium tuberculosis T46]
 gi|289571651|ref|ZP_06451878.1| PPE family protein [Mycobacterium tuberculosis T17]
 gi|289576158|ref|ZP_06456385.1| PPE family protein [Mycobacterium tuberculosis K85]
 14 more sequence titles
 
gi|289752145|ref|ZP_06511523.1| PPE family protein [Mycobacterium tuberculosis T92]
 gi|289755555|ref|ZP_06514933.1| PPE family protein [Mycobacterium tuberculosis EAS054]
 gi|289759585|ref|ZP_06518963.1| PPE family protein [Mycobacterium tuberculosis T85]
 gi|294995801|ref|ZP_06801492.1| PPE family protein [Mycobacterium tuberculosis 210]
 gi|298526908|ref|ZP_07014317.1| PPE family protein [Mycobacterium tuberculosis 94_M4241A]
 gi|289417835|gb|EFD15075.1| PPE family protein [Mycobacterium tuberculosis T46]
 gi|289540589|gb|EFD45167.1| PPE family protein [Mycobacterium tuberculosis K85]
 gi|289545405|gb|EFD49053.1| PPE family protein [Mycobacterium tuberculosis T17]
 gi|289692732|gb|EFD60161.1| PPE family protein [Mycobacterium tuberculosis T92]
 gi|289696142|gb|EFD63571.1| PPE family protein [Mycobacterium tuberculosis EAS054]
 gi|289715149|gb|EFD79161.1| PPE family protein [Mycobacterium tuberculosis T85]
 gi|298496702|gb|EFI31996.1| PPE family protein [Mycobacterium tuberculosis 94_M4241A]
 gi|305662420|gb|ADM62324.1| PPE58 [Mycobacterium tuberculosis]
 gi|305662425|gb|ADM62328.1| PPE58 [Mycobacterium tuberculosis]
Length=176

 Score =  243 bits (621),  Expect = 6e-63, Method: Compositional matrix adjust.
 Identities = 123/176 (70%), Positives = 138/176 (79%), Gaps = 0/176 (0%)

Query  1    MHPMIPAEYISNIIYEGPGADSLFFASGQLRELAYSVETTAESLEDELDELDENWKGSSS  60
            MH MIPAEYISN+IYEGP ADSL+ A  +LR+LA SV TTAESL   LDEL ENWKGSSS
Sbjct  1    MHLMIPAEYISNVIYEGPRADSLYAADQRLRQLADSVRTTAESLNTTLDELHENWKGSSS  60

Query  61   DLLADAVERYLQWLSKHSSQLKHAAWVINGLANAYNDTRRKVVPPEEIAANREERRRLIA  120
            + +ADA  RYL WLSKHS Q+   A VI  L  AY +T  +VVPP  IA NREE RRLIA
Sbjct  61   EWMADAALRYLDWLSKHSRQILRTARVIESLVMAYEETLLRVVPPATIANNREEVRRLIA  120

Query  121  SNVAGVNTPAIADLDAQYDQYRARNVAVMNAYVSWTRSALSDLPRWREPPQIYRGG  176
            SNVAGVNTPAIADL+AQY+QYRA N+  M+ Y+SWTR ALS LPRWREPPQI+R G
Sbjct  121  SNVAGVNTPAIADLEAQYEQYRAENIQAMDRYLSWTRFALSKLPRWREPPQIHRSG  176


>gi|308232462|ref|ZP_07416100.2| PPE family protein [Mycobacterium tuberculosis SUMu001]
 gi|308370263|ref|ZP_07666905.1| PPE family protein [Mycobacterium tuberculosis SUMu002]
 gi|308371345|ref|ZP_07667143.1| PPE family protein [Mycobacterium tuberculosis SUMu003]
 7 more sequence titles
 
gi|308372544|ref|ZP_07667407.1| PPE family protein [Mycobacterium tuberculosis SUMu004]
 gi|308380698|ref|ZP_07669260.1| PPE family protein [Mycobacterium tuberculosis SUMu011]
 gi|308213940|gb|EFO73339.1| PPE family protein [Mycobacterium tuberculosis SUMu001]
 gi|308324885|gb|EFP13736.1| PPE family protein [Mycobacterium tuberculosis SUMu002]
 gi|308329067|gb|EFP17918.1| PPE family protein [Mycobacterium tuberculosis SUMu003]
 gi|308332928|gb|EFP21779.1| PPE family protein [Mycobacterium tuberculosis SUMu004]
 gi|308360714|gb|EFP49565.1| PPE family protein [Mycobacterium tuberculosis SUMu011]
Length=226

 Score =  242 bits (618),  Expect = 1e-62, Method: Compositional matrix adjust.
 Identities = 123/176 (70%), Positives = 136/176 (78%), Gaps = 0/176 (0%)

Query  1    MHPMIPAEYISNIIYEGPGADSLFFASGQLRELAYSVETTAESLEDELDELDENWKGSSS  60
            MHPMIPAEYISNIIYEGPGADSL  A+ QLR +  S   TA+SL D L EL ENWKGSSS
Sbjct  49   MHPMIPAEYISNIIYEGPGADSLSAAAEQLRLMYNSANMTAKSLTDRLGELQENWKGSSS  108

Query  61   DLLADAVERYLQWLSKHSSQLKHAAWVINGLANAYNDTRRKVVPPEEIAANREERRRLIA  120
            DL+ADA  RYL WL+KHS Q+   A+VI+ LA  Y +TR KVVPP  IA NREE  RLIA
Sbjct  109  DLMADAAGRYLDWLTKHSRQILETAYVIDFLAYVYEETRHKVVPPATIANNREEVHRLIA  168

Query  121  SNVAGVNTPAIADLDAQYDQYRARNVAVMNAYVSWTRSALSDLPRWREPPQIYRGG  176
            SNVAGVNTPAIA LDAQY QYRA+N+AVMN Y S  R  L+ LPRW+EPPQIY GG
Sbjct  169  SNVAGVNTPAIAGLDAQYQQYRAQNIAVMNDYQSTARFILAYLPRWQEPPQIYGGG  224


>gi|15843022|ref|NP_338059.1| PPE family protein [Mycobacterium tuberculosis CDC1551]
 gi|57117107|ref|YP_177973.1| PPE family protein [Mycobacterium tuberculosis H37Rv]
 gi|148663293|ref|YP_001284816.1| PPE family protein [Mycobacterium tuberculosis H37Ra]
 20 more sequence titles
 
gi|148824638|ref|YP_001289392.1| PPE family protein [Mycobacterium tuberculosis F11]
 gi|254234025|ref|ZP_04927350.1| PPE family protein [Mycobacterium tuberculosis C]
 gi|254366034|ref|ZP_04982079.1| PPE family protein [Mycobacterium tuberculosis str. Haarlem]
 gi|289449131|ref|ZP_06438875.1| PPE family protein [Mycobacterium tuberculosis CPHL_A]
 gi|289576164|ref|ZP_06456391.1| PPE family protein [Mycobacterium tuberculosis K85]
 gi|306795209|ref|ZP_07433511.1| PPE family protein [Mycobacterium tuberculosis SUMu005]
 gi|306973893|ref|ZP_07486554.1| PPE family protein [Mycobacterium tuberculosis SUMu010]
 gi|339633434|ref|YP_004725076.1| PPE family protein [Mycobacterium africanum GM041182]
 gi|18201945|sp|O06246.1|PPE59_MYCTU RecName: Full=Uncharacterized PPE family protein PPE59
 gi|13883364|gb|AAK47873.1| PPE family protein [Mycobacterium tuberculosis CDC1551]
 gi|41352788|emb|CAE55598.1| PPE FAMILY PROTEIN [Mycobacterium tuberculosis H37Rv]
 gi|124599554|gb|EAY58658.1| PPE family protein [Mycobacterium tuberculosis C]
 gi|134151547|gb|EBA43592.1| PPE family protein [Mycobacterium tuberculosis str. Haarlem]
 gi|148507445|gb|ABQ75254.1| PPE family protein [Mycobacterium tuberculosis H37Ra]
 gi|148723165|gb|ABR07790.1| PPE family protein [Mycobacterium tuberculosis F11]
 gi|289422089|gb|EFD19290.1| PPE family protein [Mycobacterium tuberculosis CPHL_A]
 gi|289540595|gb|EFD45173.1| PPE family protein [Mycobacterium tuberculosis K85]
 gi|308336537|gb|EFP25388.1| PPE family protein [Mycobacterium tuberculosis SUMu005]
 gi|308356731|gb|EFP45582.1| PPE family protein [Mycobacterium tuberculosis SUMu010]
 gi|339332790|emb|CCC28513.1| PPE family protein [Mycobacterium africanum GM041182]
Length=178

 Score =  242 bits (618),  Expect = 1e-62, Method: Compositional matrix adjust.
 Identities = 123/176 (70%), Positives = 136/176 (78%), Gaps = 0/176 (0%)

Query  1    MHPMIPAEYISNIIYEGPGADSLFFASGQLRELAYSVETTAESLEDELDELDENWKGSSS  60
            MHPMIPAEYISNIIYEGPGADSL  A+ QLR +  S   TA+SL D L EL ENWKGSSS
Sbjct  1    MHPMIPAEYISNIIYEGPGADSLSAAAEQLRLMYNSANMTAKSLTDRLGELQENWKGSSS  60

Query  61   DLLADAVERYLQWLSKHSSQLKHAAWVINGLANAYNDTRRKVVPPEEIAANREERRRLIA  120
            DL+ADA  RYL WL+KHS Q+   A+VI+ LA  Y +TR KVVPP  IA NREE  RLIA
Sbjct  61   DLMADAAGRYLDWLTKHSRQILETAYVIDFLAYVYEETRHKVVPPATIANNREEVHRLIA  120

Query  121  SNVAGVNTPAIADLDAQYDQYRARNVAVMNAYVSWTRSALSDLPRWREPPQIYRGG  176
            SNVAGVNTPAIA LDAQY QYRA+N+AVMN Y S  R  L+ LPRW+EPPQIY GG
Sbjct  121  SNVAGVNTPAIAGLDAQYQQYRAQNIAVMNDYQSTARFILAYLPRWQEPPQIYGGG  176


>gi|254552530|ref|ZP_05142977.1| PPE family protein [Mycobacterium tuberculosis '98-R604 INH-RIF-EM']
Length=175

 Score =  241 bits (615),  Expect = 3e-62, Method: Compositional matrix adjust.
 Identities = 123/173 (72%), Positives = 136/173 (79%), Gaps = 0/173 (0%)

Query  4    MIPAEYISNIIYEGPGADSLFFASGQLRELAYSVETTAESLEDELDELDENWKGSSSDLL  63
            MIPAEYISNIIYEGPGADSL  A+ QLR +  S   TA+SL D L EL ENWKGSSSDL+
Sbjct  1    MIPAEYISNIIYEGPGADSLSAAAEQLRLMYNSANMTAKSLTDRLGELQENWKGSSSDLM  60

Query  64   ADAVERYLQWLSKHSSQLKHAAWVINGLANAYNDTRRKVVPPEEIAANREERRRLIASNV  123
            ADAVERYLQWL+KHS Q+   A+VI+ LA  Y +TR KVVPP  IA NREE  RLIASNV
Sbjct  61   ADAVERYLQWLTKHSRQILETAYVIDFLAYVYEETRHKVVPPATIANNREEVHRLIASNV  120

Query  124  AGVNTPAIADLDAQYDQYRARNVAVMNAYVSWTRSALSDLPRWREPPQIYRGG  176
            AGVNTPAIA LDAQY QYRA+N+AVMN Y S  R  L+ LPRW+EPPQIY GG
Sbjct  121  AGVNTPAIAGLDAQYQQYRAQNIAVMNDYQSTARFILAYLPRWQEPPQIYGGG  173


>gi|148824632|ref|YP_001289386.1| PPE family protein [Mycobacterium tuberculosis F11]
 gi|289747255|ref|ZP_06506633.1| PPE family protein [Mycobacterium tuberculosis 02_1987]
 gi|148723159|gb|ABR07784.1| PPE family protein [Mycobacterium tuberculosis F11]
 gi|289687783|gb|EFD55271.1| PPE family protein [Mycobacterium tuberculosis 02_1987]
 gi|339296248|gb|AEJ48359.1| PPE family protein [Mycobacterium tuberculosis CCDC5079]
 gi|339299850|gb|AEJ51960.1| PPE family protein [Mycobacterium tuberculosis CCDC5180]
Length=173

 Score =  238 bits (608),  Expect = 2e-61, Method: Compositional matrix adjust.
 Identities = 121/173 (70%), Positives = 136/173 (79%), Gaps = 0/173 (0%)

Query  4    MIPAEYISNIIYEGPGADSLFFASGQLRELAYSVETTAESLEDELDELDENWKGSSSDLL  63
            MIPAEYISN+IYEGP ADSL+ A  +LR+LA SV TTAESL   LDEL ENWKGSSS+ +
Sbjct  1    MIPAEYISNVIYEGPRADSLYAADQRLRQLADSVRTTAESLNTTLDELHENWKGSSSEWM  60

Query  64   ADAVERYLQWLSKHSSQLKHAAWVINGLANAYNDTRRKVVPPEEIAANREERRRLIASNV  123
            ADA  RYL WLSKHS Q+   A VI  L  AY +T  +VVPP  IA NREE RRLIASNV
Sbjct  61   ADAALRYLDWLSKHSRQILRTARVIESLVMAYEETLLRVVPPATIANNREEVRRLIASNV  120

Query  124  AGVNTPAIADLDAQYDQYRARNVAVMNAYVSWTRSALSDLPRWREPPQIYRGG  176
            AGVNTPAIADL+AQY+QYRA N+  M+ Y+SWTR ALS LPRWREPPQI+R G
Sbjct  121  AGVNTPAIADLEAQYEQYRAENIQAMDRYLSWTRFALSKLPRWREPPQIHRSG  173


>gi|167968687|ref|ZP_02550964.1| PPE family protein [Mycobacterium tuberculosis H37Ra]
Length=125

 Score =  234 bits (597),  Expect = 4e-60, Method: Compositional matrix adjust.
 Identities = 115/115 (100%), Positives = 115/115 (100%), Gaps = 0/115 (0%)

Query  62   LLADAVERYLQWLSKHSSQLKHAAWVINGLANAYNDTRRKVVPPEEIAANREERRRLIAS  121
            LLADAVERYLQWLSKHSSQLKHAAWVINGLANAYNDTRRKVVPPEEIAANREERRRLIAS
Sbjct  11   LLADAVERYLQWLSKHSSQLKHAAWVINGLANAYNDTRRKVVPPEEIAANREERRRLIAS  70

Query  122  NVAGVNTPAIADLDAQYDQYRARNVAVMNAYVSWTRSALSDLPRWREPPQIYRGG  176
            NVAGVNTPAIADLDAQYDQYRARNVAVMNAYVSWTRSALSDLPRWREPPQIYRGG
Sbjct  71   NVAGVNTPAIADLDAQYDQYRARNVAVMNAYVSWTRSALSDLPRWREPPQIYRGG  125


>gi|167968681|ref|ZP_02550958.1| PPE family protein [Mycobacterium tuberculosis H37Ra]
Length=175

 Score =  234 bits (596),  Expect = 5e-60, Method: Compositional matrix adjust.
 Identities = 120/173 (70%), Positives = 133/173 (77%), Gaps = 0/173 (0%)

Query  4    MIPAEYISNIIYEGPGADSLFFASGQLRELAYSVETTAESLEDELDELDENWKGSSSDLL  63
            MIPAEYISNIIYEGPGADSL  A+ QLR +  S   TA+SL D L EL ENWKGSSSDL+
Sbjct  1    MIPAEYISNIIYEGPGADSLSAAAEQLRLMYNSANMTAKSLTDRLGELQENWKGSSSDLM  60

Query  64   ADAVERYLQWLSKHSSQLKHAAWVINGLANAYNDTRRKVVPPEEIAANREERRRLIASNV  123
            ADA  RYL WL+KHS Q+   A+VI+ LA  Y +TR KVVPP  IA NREE  RLIASNV
Sbjct  61   ADAAGRYLDWLTKHSRQILETAYVIDFLAYVYEETRHKVVPPATIANNREEVHRLIASNV  120

Query  124  AGVNTPAIADLDAQYDQYRARNVAVMNAYVSWTRSALSDLPRWREPPQIYRGG  176
            AGVNTPAIA LDAQY QYRA+N+AVMN Y S  R  L+ LPRW+EPPQIY GG
Sbjct  121  AGVNTPAIAGLDAQYQQYRAQNIAVMNDYQSTARFILAYLPRWQEPPQIYGGG  173


>gi|339299856|gb|AEJ51966.1| PPE family protein [Mycobacterium tuberculosis CCDC5180]
Length=156

 Score =  202 bits (513),  Expect = 2e-50, Method: Compositional matrix adjust.
 Identities = 102/154 (67%), Positives = 116/154 (76%), Gaps = 0/154 (0%)

Query  23   LFFASGQLRELAYSVETTAESLEDELDELDENWKGSSSDLLADAVERYLQWLSKHSSQLK  82
            +FFA+ QLR +  S   TA+SL D L EL ENWKGSSSDL+ADA  RYL WL+KHS Q+ 
Sbjct  1    MFFAAEQLRLMYNSANMTAKSLTDRLGELQENWKGSSSDLMADAAGRYLDWLTKHSRQIL  60

Query  83   HAAWVINGLANAYNDTRRKVVPPEEIAANREERRRLIASNVAGVNTPAIADLDAQYDQYR  142
              A+VI+ LA  Y +TR KVVPP  IA NREE  RLIASNVAGVNTPAIA LDAQY QYR
Sbjct  61   ETAYVIDFLAYVYEETRHKVVPPATIANNREEVHRLIASNVAGVNTPAIAGLDAQYQQYR  120

Query  143  ARNVAVMNAYVSWTRSALSDLPRWREPPQIYRGG  176
            A+N+AVMN Y S  R  L+ LPRW+EPPQIY GG
Sbjct  121  AQNIAVMNDYQSTARFILAYLPRWQEPPQIYGGG  154


>gi|323717911|gb|EGB27100.1| PPE family protein [Mycobacterium tuberculosis CDC1551A]
Length=156

 Score =  195 bits (495),  Expect = 2e-48, Method: Compositional matrix adjust.
 Identities = 100/151 (67%), Positives = 113/151 (75%), Gaps = 0/151 (0%)

Query  26   ASGQLRELAYSVETTAESLEDELDELDENWKGSSSDLLADAVERYLQWLSKHSSQLKHAA  85
            A+ QLR +  S   TA+SL D L EL ENWKGSSSDL+ADA  RYL WL+KHS Q+   A
Sbjct  4    AAEQLRLMYNSANMTAKSLTDRLGELQENWKGSSSDLMADAAGRYLDWLTKHSRQILETA  63

Query  86   WVINGLANAYNDTRRKVVPPEEIAANREERRRLIASNVAGVNTPAIADLDAQYDQYRARN  145
            +VI+ LA  Y +TR KVVPP  IA NREE  RLIASNVAGVNTPAIA LDAQY QYRA+N
Sbjct  64   YVIDFLAYVYEETRHKVVPPATIANNREEVHRLIASNVAGVNTPAIAGLDAQYQQYRAQN  123

Query  146  VAVMNAYVSWTRSALSDLPRWREPPQIYRGG  176
            +AVMN Y S  R  L+ LPRW+EPPQIY GG
Sbjct  124  IAVMNDYQSTARFILAYLPRWQEPPQIYGGG  154


>gi|289571657|ref|ZP_06451884.1| PPE family protein [Mycobacterium tuberculosis T17]
 gi|298526911|ref|ZP_07014320.1| ppe family protein [Mycobacterium tuberculosis 94_M4241A]
 gi|289545411|gb|EFD49059.1| PPE family protein [Mycobacterium tuberculosis T17]
 gi|298496705|gb|EFI31999.1| ppe family protein [Mycobacterium tuberculosis 94_M4241A]
 gi|326905273|gb|EGE52206.1| PPE family protein [Mycobacterium tuberculosis W-148]
Length=176

 Score =  190 bits (482),  Expect = 9e-47, Method: Compositional matrix adjust.
 Identities = 97/173 (57%), Positives = 118/173 (69%), Gaps = 0/173 (0%)

Query  4    MIPAEYISNIIYEGPGADSLFFASGQLRELAYSVETTAESLEDELDELDENWKGSSSDLL  63
            M PA  IS  +Y GPGADS+  AS QLRELA+S +TTA+SL D L +LD+ W G SS  +
Sbjct  1    MTPAHQISYQMYAGPGADSMRAASQQLRELAFSADTTADSLNDTLFDLDDTWIGGSSAFM  60

Query  64   ADAVERYLQWLSKHSSQLKHAAWVINGLANAYNDTRRKVVPPEEIAANREERRRLIASNV  123
             DA  RYL+WLSKHS +L   A  I+ LAN Y D R++VVPP  I  NREE RRLIAS++
Sbjct  61   TDAALRYLKWLSKHSKRLWQTANTIHHLANTYEDIRQRVVPPAAIEDNREEVRRLIASDI  120

Query  124  AGVNTPAIADLDAQYDQYRARNVAVMNAYVSWTRSALSDLPRWREPPQIYRGG  176
             G N PAIA+LD QY  Y   NV  MN Y    ++ LS LPRW+EPPQI++ G
Sbjct  121  TGENAPAIAELDEQYQSYGDTNVQAMNLYAERAQTLLSQLPRWQEPPQIHQRG  173


>gi|148824635|ref|YP_001289389.1| PPE family protein [Mycobacterium tuberculosis F11]
 gi|289445026|ref|ZP_06434770.1| PPE family protein [Mycobacterium tuberculosis T46]
 gi|289449128|ref|ZP_06438872.1| PPE family protein [Mycobacterium tuberculosis CPHL_A]
 20 more sequence titles
 
gi|289576161|ref|ZP_06456388.1| PPE family protein [Mycobacterium tuberculosis K85]
 gi|289747259|ref|ZP_06506637.1| PPE family protein [Mycobacterium tuberculosis 02_1987]
 gi|289752149|ref|ZP_06511527.1| PPE family protein [Mycobacterium tuberculosis T92]
 gi|289755559|ref|ZP_06514937.1| PPE family protein [Mycobacterium tuberculosis EAS054]
 gi|289759590|ref|ZP_06518968.1| PPE family protein [Mycobacterium tuberculosis T85]
 gi|306777771|ref|ZP_07416108.1| putative PPE family protein [Mycobacterium tuberculosis SUMu001]
 gi|306973890|ref|ZP_07486551.1| putative PPE family protein [Mycobacterium tuberculosis SUMu010]
 gi|307081602|ref|ZP_07490772.1| putative PPE family protein [Mycobacterium tuberculosis SUMu011]
 gi|148723162|gb|ABR07787.1| PPE family protein [Mycobacterium tuberculosis F11]
 gi|289417945|gb|EFD15185.1| PPE family protein [Mycobacterium tuberculosis T46]
 gi|289422086|gb|EFD19287.1| PPE family protein [Mycobacterium tuberculosis CPHL_A]
 gi|289540592|gb|EFD45170.1| PPE family protein [Mycobacterium tuberculosis K85]
 gi|289687787|gb|EFD55275.1| PPE family protein [Mycobacterium tuberculosis 02_1987]
 gi|289692736|gb|EFD60165.1| PPE family protein [Mycobacterium tuberculosis T92]
 gi|289696146|gb|EFD63575.1| PPE family protein [Mycobacterium tuberculosis EAS054]
 gi|289715154|gb|EFD79166.1| PPE family protein [Mycobacterium tuberculosis T85]
 gi|308213904|gb|EFO73303.1| putative PPE family protein [Mycobacterium tuberculosis SUMu001]
 gi|308356774|gb|EFP45625.1| putative PPE family protein [Mycobacterium tuberculosis SUMu010]
 gi|308360723|gb|EFP49574.1| putative PPE family protein [Mycobacterium tuberculosis SUMu011]
 gi|339299854|gb|AEJ51964.1| PPE family protein [Mycobacterium tuberculosis CCDC5180]
Length=180

 Score =  188 bits (478),  Expect = 2e-46, Method: Compositional matrix adjust.
 Identities = 96/173 (56%), Positives = 118/173 (69%), Gaps = 0/173 (0%)

Query  4    MIPAEYISNIIYEGPGADSLFFASGQLRELAYSVETTAESLEDELDELDENWKGSSSDLL  63
            + PA  IS  +Y GPGADS+  AS QLRELA+S +TTA+SL D L +LD+ W G SS  +
Sbjct  5    LTPAHQISYQMYAGPGADSMRAASQQLRELAFSADTTADSLNDTLFDLDDTWIGGSSAFM  64

Query  64   ADAVERYLQWLSKHSSQLKHAAWVINGLANAYNDTRRKVVPPEEIAANREERRRLIASNV  123
             DA  RYL+WLSKHS +L   A  I+ LAN Y D R++VVPP  I  NREE RRLIAS++
Sbjct  65   TDAALRYLKWLSKHSKRLWQTANTIHHLANTYEDIRQRVVPPAAIEDNREEVRRLIASDI  124

Query  124  AGVNTPAIADLDAQYDQYRARNVAVMNAYVSWTRSALSDLPRWREPPQIYRGG  176
             G N PAIA+LD QY  Y   NV  MN Y    ++ LS LPRW+EPPQI++ G
Sbjct  125  TGENAPAIAELDEQYQSYGDTNVQAMNLYAERAQTLLSQLPRWQEPPQIHQRG  177


>gi|289759584|ref|ZP_06518962.1| PPE family protein [Mycobacterium tuberculosis T85]
 gi|289715148|gb|EFD79160.1| PPE family protein [Mycobacterium tuberculosis T85]
Length=90

 Score =  179 bits (455),  Expect = 1e-43, Method: Compositional matrix adjust.
 Identities = 88/90 (98%), Positives = 89/90 (99%), Gaps = 0/90 (0%)

Query  87   VINGLANAYNDTRRKVVPPEEIAANREERRRLIASNVAGVNTPAIADLDAQYDQYRARNV  146
            +INGLANAYNDTRRKVVPPEEIAANREERRRLIASNVAGVN PAIADLDAQYDQYRARNV
Sbjct  1    MINGLANAYNDTRRKVVPPEEIAANREERRRLIASNVAGVNAPAIADLDAQYDQYRARNV  60

Query  147  AVMNAYVSWTRSALSDLPRWREPPQIYRGG  176
            AVMNAYVSWTRSALSDLPRWREPPQIYRGG
Sbjct  61   AVMNAYVSWTRSALSDLPRWREPPQIYRGG  90


>gi|294995796|ref|ZP_06801487.1| PPE family protein [Mycobacterium tuberculosis 210]
 gi|339296252|gb|AEJ48363.1| PPE family protein [Mycobacterium tuberculosis CCDC5079]
Length=157

 Score =  167 bits (422),  Expect = 8e-40, Method: Compositional matrix adjust.
 Identities = 85/151 (57%), Positives = 104/151 (69%), Gaps = 0/151 (0%)

Query  26   ASGQLRELAYSVETTAESLEDELDELDENWKGSSSDLLADAVERYLQWLSKHSSQLKHAA  85
            AS QLRELA+S +TTA+SL D L +LD+ W G SS  + DA  RYL+WLSKHS +L   A
Sbjct  4    ASQQLRELAFSADTTADSLNDTLFDLDDTWIGGSSAFMTDAALRYLKWLSKHSKRLWQTA  63

Query  86   WVINGLANAYNDTRRKVVPPEEIAANREERRRLIASNVAGVNTPAIADLDAQYDQYRARN  145
              I+ LAN Y D R++VVPP  I  NREE RRLIAS++ G N PAIA+LD QY  Y   N
Sbjct  64   NTIHHLANTYEDIRQRVVPPAAIEDNREEVRRLIASDITGENAPAIAELDEQYQSYGDTN  123

Query  146  VAVMNAYVSWTRSALSDLPRWREPPQIYRGG  176
            V  MN Y    ++ LS LPRW+EPPQI++ G
Sbjct  124  VQAMNLYAERAQTLLSQLPRWQEPPQIHQRG  154


>gi|57117106|ref|YP_177972.1| PPE family protein [Mycobacterium tuberculosis H37Rv]
 gi|148663290|ref|YP_001284813.1| PPE family protein [Mycobacterium tuberculosis H37Ra]
 gi|167968685|ref|ZP_02550962.1| PPE family protein [Mycobacterium tuberculosis H37Ra]
 gi|306777766|ref|ZP_07416103.1| putative PPE family protein [Mycobacterium tuberculosis SUMu001]
 gi|2496464|sp|Q50702.1|PPE58_MYCTU RecName: Full=Uncharacterized PPE family protein PPE58
 gi|41352787|emb|CAE55597.1| PPE FAMILY PROTEIN [Mycobacterium tuberculosis H37Rv]
 gi|148507442|gb|ABQ75251.1| PPE family protein [Mycobacterium tuberculosis H37Ra]
 gi|308213900|gb|EFO73299.1| putative PPE family protein [Mycobacterium tuberculosis SUMu001]
Length=232

 Score =  161 bits (408),  Expect = 3e-38, Method: Compositional matrix adjust.
 Identities = 85/125 (68%), Positives = 94/125 (76%), Gaps = 0/125 (0%)

Query  1    MHPMIPAEYISNIIYEGPGADSLFFASGQLRELAYSVETTAESLEDELDELDENWKGSSS  60
            MH MIPAEYISN+IYEGP ADSL+ A  +LR+LA SV TTAESL   LDEL ENWKGSSS
Sbjct  1    MHLMIPAEYISNVIYEGPRADSLYAADQRLRQLADSVRTTAESLNTTLDELHENWKGSSS  60

Query  61   DLLADAVERYLQWLSKHSSQLKHAAWVINGLANAYNDTRRKVVPPEEIAANREERRRLIA  120
            + +ADA  RYL WLSKHS Q+   A VI  L  AY +T  +VVPP  IA NREE RRLIA
Sbjct  61   EWMADAALRYLDWLSKHSRQILRTARVIESLVMAYEETLLRVVPPATIANNREEVRRLIA  120

Query  121  SNVAG  125
            SNVAG
Sbjct  121  SNVAG  125


>gi|289747254|ref|ZP_06506632.1| PPE family protein [Mycobacterium tuberculosis 02_1987]
 gi|289687782|gb|EFD55270.1| PPE family protein [Mycobacterium tuberculosis 02_1987]
Length=86

 Score =  154 bits (388),  Expect = 6e-36, Method: Compositional matrix adjust.
 Identities = 75/76 (99%), Positives = 75/76 (99%), Gaps = 0/76 (0%)

Query  1   MHPMIPAEYISNIIYEGPGADSLFFASGQLRELAYSVETTAESLEDELDELDENWKGSSS  60
           MHPMIPAEYISNIIYEGPGADSLFFASGQLRELAYSVETTAESLEDELDELDENWKGSSS
Sbjct  1   MHPMIPAEYISNIIYEGPGADSLFFASGQLRELAYSVETTAESLEDELDELDENWKGSSS  60

Query  61  DLLADAVERYLQWLSK  76
           DLLADAVERYLQWLS 
Sbjct  61  DLLADAVERYLQWLSN  76


>gi|342861517|ref|ZP_08718164.1| PPE family protein [Mycobacterium colombiense CECT 3035]
 gi|342131006|gb|EGT84295.1| PPE family protein [Mycobacterium colombiense CECT 3035]
Length=389

 Score =  105 bits (263),  Expect = 2e-21, Method: Compositional matrix adjust.
 Identities = 62/169 (37%), Positives = 90/169 (54%), Gaps = 1/169 (0%)

Query  4    MIPAEYISNIIYEGPGADSLFFASGQLRELAYSVETTAESLEDELDELDENWKGSSSDLL  63
            ++P E IS +I+ GPGA S   A+G  + L+  +E +A S   EL EL   W G SS  +
Sbjct  5    ILPPEVISALIHAGPGAWSWIEAAGMWQTLSAELELSANSYTAELSELATTWHGPSSMAM  64

Query  64   ADAVERYLQWLSKHSSQLKHAAWVINGLANAYNDTRRKVVPPEEIAANREERRRLIASNV  123
            A A E YL WL   + Q +  A  +  +A A+  T   VV P  +AANR     L+A+N 
Sbjct  65   AQAFEPYLDWLRVTAQQCQQVATSVEVMATAFESTHWTVVHPSLVAANRARLAMLVATNF  124

Query  124  AGVNTPAIADLDAQYDQYRARNVAVMNAYVSWTRSALSDLPRWREPPQI  172
             G+N PAIA+ + +Y      + A M  Y + T +A    P++  PPQ+
Sbjct  125  FGINFPAIAETETEYHAMWVTDSAAMYRYAA-TAAASVRPPQFSSPPQV  172


>gi|254820680|ref|ZP_05225681.1| PPE family protein [Mycobacterium intracellulare ATCC 13950]
 gi|212596684|gb|ACJ35598.1| PPE34 [Mycobacterium intracellulare ATCC 13950]
Length=382

 Score =  104 bits (260),  Expect = 4e-21, Method: Compositional matrix adjust.
 Identities = 66/169 (40%), Positives = 93/169 (56%), Gaps = 1/169 (0%)

Query  4    MIPAEYISNIIYEGPGADSLFFASGQLRELAYSVETTAESLEDELDELDENWKGSSSDLL  63
            ++P E IS +I+ GPGA SL  A+G  +EL+  +E +A S   EL  L   W G SS  +
Sbjct  5    ILPPEIISALIHSGPGAWSLIEAAGFWQELSAELEQSASSYTAELSWLSTTWHGPSSMAM  64

Query  64   ADAVERYLQWLSKHSSQLKHAAWVINGLANAYNDTRRKVVPPEEIAANREERRRLIASNV  123
            A A+E YL WL   + Q +  A  +  +A A+  T   VV P  +AANR     L+A+N 
Sbjct  65   AQALEPYLAWLRLTAQQCQQTAASVQVVAAAFEWTHWTVVHPSLVAANRARLAMLLATNF  124

Query  124  AGVNTPAIADLDAQYDQYRARNVAVMNAYVSWTRSALSDLPRWREPPQI  172
             GVN PAIA+ +A+Y      N A M  Y + T +    LP++  PPQ+
Sbjct  125  FGVNYPAIAETEAEYHTMWVNNSAAMYRYAA-TSAGAVKLPQFSPPPQV  172


>gi|254776707|ref|ZP_05218223.1| PPE family protein [Mycobacterium avium subsp. avium ATCC 25291]
 gi|212596173|gb|ACJ35557.1| PPE34 [Mycobacterium avium subsp. avium]
Length=378

 Score =  103 bits (256),  Expect = 1e-20, Method: Compositional matrix adjust.
 Identities = 61/169 (37%), Positives = 92/169 (55%), Gaps = 1/169 (0%)

Query  4    MIPAEYISNIIYEGPGADSLFFASGQLRELAYSVETTAESLEDELDELDENWKGSSSDLL  63
            ++P E  S +I+ GPGA S   A+G  ++L+  +E +A S   EL  L   W+G S+  +
Sbjct  5    ILPPEVTSALIHAGPGAWSWIEAAGVWQQLSMELEQSASSYTAELAALSTTWQGPSALAM  64

Query  64   ADAVERYLQWLSKHSSQLKHAAWVINGLANAYNDTRRKVVPPEEIAANREERRRLIASNV  123
              A+E Y+ WL   + Q +  A  +     A+  T   VV P  +AANR     L+A+N 
Sbjct  65   TRALEPYVDWLRITAQQCQEIATSVQTATAAFELTHWTVVHPSLVAANRARLAMLLATNF  124

Query  124  AGVNTPAIADLDAQYDQYRARNVAVMNAYVSWTRSALSDLPRWREPPQI  172
             G+N PAIA+ +A+Y      N A M  Y + + SA+  LPR+ EPPQ+
Sbjct  125  FGINYPAIAETEAEYHAMWVNNSAAMYRYAATSASAV-RLPRFTEPPQV  172


>gi|41409517|ref|NP_962353.1| hypothetical protein MAP3419c [Mycobacterium avium subsp. paratuberculosis 
K-10]
 gi|118466968|ref|YP_883413.1| PPE family protein [Mycobacterium avium 104]
 gi|41398348|gb|AAS05969.1| hypothetical protein MAP_3419c [Mycobacterium avium subsp. paratuberculosis 
K-10]
 gi|118168255|gb|ABK69152.1| PPE family protein [Mycobacterium avium 104]
 gi|336459616|gb|EGO38551.1| PPE family protein [Mycobacterium avium subsp. paratuberculosis 
S397]
Length=378

 Score =  102 bits (254),  Expect = 2e-20, Method: Compositional matrix adjust.
 Identities = 60/169 (36%), Positives = 92/169 (55%), Gaps = 1/169 (0%)

Query  4    MIPAEYISNIIYEGPGADSLFFASGQLRELAYSVETTAESLEDELDELDENWKGSSSDLL  63
            ++P E  S +I+ GPGA S   A+G  ++L+  +E +A S   EL  L   W+G S+  +
Sbjct  5    ILPPEVTSALIHAGPGAWSWIEAAGVWQQLSMELEQSASSYTAELAALSTTWQGPSALAM  64

Query  64   ADAVERYLQWLSKHSSQLKHAAWVINGLANAYNDTRRKVVPPEEIAANREERRRLIASNV  123
              A+E Y+ WL   + Q +  A  +     A+  T   VV P  +AANR     L+A+N 
Sbjct  65   TRALEPYVDWLRITAQQCQEIATSVQTATAAFELTHWTVVHPSLVAANRARLAMLLATNF  124

Query  124  AGVNTPAIADLDAQYDQYRARNVAVMNAYVSWTRSALSDLPRWREPPQI  172
             G+N PAIA+ +A+Y      N A M  Y + + +A+  LPR+ EPPQ+
Sbjct  125  FGINYPAIAETEAEYHAMWVNNSAAMYRYAATSATAV-RLPRFTEPPQV  172


>gi|342861033|ref|ZP_08717682.1| PPE family protein [Mycobacterium colombiense CECT 3035]
 gi|342131477|gb|EGT84747.1| PPE family protein [Mycobacterium colombiense CECT 3035]
Length=376

 Score = 99.4 bits (246),  Expect = 2e-19, Method: Compositional matrix adjust.
 Identities = 58/153 (38%), Positives = 82/153 (54%), Gaps = 0/153 (0%)

Query  14   IYEGPGADSLFFASGQLRELAYSVETTAESLEDELDELDENWKGSSSDLLADAVERYLQW  73
            +Y GPG  SL  A+G    L+  + +TAES E  L  L   W+G +++ +A +  RY+ W
Sbjct  1    MYTGPGLASLLAAAGSWDALSAELASTAESYESVLVGLGLQWRGPAAESMAYSAARYMGW  60

Query  74   LSKHSSQLKHAAWVINGLANAYNDTRRKVVPPEEIAANREERRRLIASNVAGVNTPAIAD  133
            L   + Q K  A      A AY       VPP  IAANR     L+A+N+ G NT AIAD
Sbjct  61   LEATAEQTKQTAMQARTAAAAYEQAYSMTVPPPVIAANRTLLASLVATNIVGQNTAAIAD  120

Query  134  LDAQYDQYRARNVAVMNAYVSWTRSALSDLPRW  166
             +AQY  + A++ A M  Y + +  A + LPR+
Sbjct  121  TEAQYSDFWAQDAAAMAGYSASSTVATAQLPRF  153


>gi|296167733|ref|ZP_06849950.1| PPE family protein [Mycobacterium parascrofulaceum ATCC BAA-614]
 gi|295897076|gb|EFG76691.1| PPE family protein [Mycobacterium parascrofulaceum ATCC BAA-614]
Length=406

 Score = 97.8 bits (242),  Expect = 6e-19, Method: Compositional matrix adjust.
 Identities = 59/168 (36%), Positives = 91/168 (55%), Gaps = 2/168 (1%)

Query  6    PAEYISNIIYEGPGADSLFFASGQLRELAYSVETTAESLEDELDELD-ENWKGSSSDLLA  64
            P EY S  +Y GPG ++L  A+     LA  + +TA   +  +  L  E W G +S  +A
Sbjct  8    PPEYNSARMYTGPGPEALTAAASAWNGLAAELNSTALGYDKVITALSGEEWLGPASASMA  67

Query  65   DAVERYLQWLSKHSSQLKHAAWVINGLANAYNDTRRKVVPPEEIAANREERRRLIASNVA  124
             AV  Y+ W+   ++Q +  A  ++  A AY       VPP  +AANR +  +L+A+NV 
Sbjct  68   QAVAPYVAWMRTTAAQAEQTANQMHAAATAYETALAATVPPPLVAANRAQTAQLLATNVL  127

Query  125  GVNTPAIADLDAQYDQYRARNVAVMNAYVSWTRSALSDLPRWREPPQI  172
            G+NTPAIA L+AQY +  A++ + M +Y   + +A    P +   PQI
Sbjct  128  GLNTPAIAQLEAQYGEMWAQDASTMYSYAGQSAAATKVAP-FTAAPQI  174


>gi|342859619|ref|ZP_08716272.1| PPE family protein [Mycobacterium colombiense CECT 3035]
 gi|342132751|gb|EGT85971.1| PPE family protein [Mycobacterium colombiense CECT 3035]
Length=458

 Score = 94.4 bits (233),  Expect = 7e-18, Method: Compositional matrix adjust.
 Identities = 56/157 (36%), Positives = 83/157 (53%), Gaps = 1/157 (0%)

Query  4    MIPAEYISNIIYEGPGADSLFFASGQLRELAYSVETTAESLEDELDELDEN-WKGSSSDL  62
            ++P E  S  +Y GPG+  +  A+    E+A +++TTA S + E+  L    W G SS  
Sbjct  5    VLPPEVNSARMYAGPGSGPMLAAAMAWDEVAAALQTTANSYQAEITALTSGPWVGPSSAA  64

Query  63   LADAVERYLQWLSKHSSQLKHAAWVINGLANAYNDTRRKVVPPEEIAANREERRRLIASN  122
            +  A+  YL+W+    +Q +  A      A AY     + VPP  + ANR +   L+A+N
Sbjct  65   MVAAITPYLEWMRTAGAQAEETANQARTAAFAYETAFAETVPPPVVTANRTQLAALVATN  124

Query  123  VAGVNTPAIADLDAQYDQYRARNVAVMNAYVSWTRSA  159
            V G NTPAIA  +A+Y +  AR+ A M  Y   T SA
Sbjct  125  VLGQNTPAIAATEAEYGEMWARDTAAMFGYAGTTASA  161


>gi|333989927|ref|YP_004522541.1| PPE family protein PPE51_2 [Mycobacterium sp. JDM601]
 gi|333485895|gb|AEF35287.1| PPE family protein PPE51_2 [Mycobacterium sp. JDM601]
Length=373

 Score = 92.0 bits (227),  Expect = 3e-17, Method: Compositional matrix adjust.
 Identities = 61/175 (35%), Positives = 90/175 (52%), Gaps = 14/175 (8%)

Query  4    MIPAEYISNIIYEGPGADSLFFA-------SGQLRELAYSVETTAESLEDELDELDENWK  56
            ++P E IS  +Y GPG+  L  +       SGQL   A    TT   L+DE       W 
Sbjct  6    ILPPEVISTQMYTGPGSGPLLASAAAWDALSGQLNAFALGYSTTLTGLQDE------GWT  59

Query  57   GSSSDLLADAVERYLQWLSKHSSQLKHAAWVINGLANAYNDTRRKVVPPEEIAANREERR  116
            G+SS  +  A   Y+ W+S+ ++Q +HAA      A AY   R   VPP  +  NR +  
Sbjct  60   GASSQAMLAAAAPYIAWVSQTATQAEHAATQSRAAAAAYESARAATVPPAVVTTNRTQLA  119

Query  117  RLIASNVAGVNTPAIADLDAQYDQYRARNVAVMNAYVSWTRSALSDLPRWREPPQ  171
             L+A+N+ G NT  I+ L+A Y Q  A++ A M+ Y +   +A + L  ++EPPQ
Sbjct  120  NLVATNIFGQNTALISALEAAYAQMWAQDAAAMHGYATTAYTA-TQLAPFQEPPQ  173


>gi|254820679|ref|ZP_05225680.1| hypothetical protein MintA_12161 [Mycobacterium intracellulare 
ATCC 13950]
 gi|212596696|gb|ACJ35599.1| PPE35 [Mycobacterium intracellulare ATCC 13950]
Length=377

 Score = 90.9 bits (224),  Expect = 7e-17, Method: Compositional matrix adjust.
 Identities = 60/169 (36%), Positives = 87/169 (52%), Gaps = 0/169 (0%)

Query  1    MHPMIPAEYISNIIYEGPGADSLFFASGQLRELAYSVETTAESLEDELDELDENWKGSSS  60
            M  + P E  S +I+ GPGA SL  A+G  + LA  +E +  +    L  L E+W G S+
Sbjct  1    MDLLAPPEVTSTLIHTGPGAGSLIEAAGAWQRLAVELENSVSTYTSTLTSLIESWDGPSA  60

Query  61   DLLADAVERYLQWLSKHSSQLKHAAWVINGLANAYNDTRRKVVPPEEIAANREERRRLIA  120
              +  +V+ YL WL + + Q    A      A+A++ TR  VV P  + ANR   R+L+A
Sbjct  61   TAMLQSVQPYLLWLRETALQSAQMATSAEAAASAFSATRATVVHPSVVTANRTRLRQLLA  120

Query  121  SNVAGVNTPAIADLDAQYDQYRARNVAVMNAYVSWTRSALSDLPRWREP  169
            +N  G NT AIA+ + +Y    A N A M  Y + T  A   L R+  P
Sbjct  121  TNRFGTNTAAIAEAENEYQTMWANNAAAMTRYQATTSQATGQLSRFTSP  169


>gi|183980225|ref|YP_001848516.1| PPE family protein, PPE51_2 [Mycobacterium marinum M]
 gi|183173551|gb|ACC38661.1| PPE family protein, PPE51_2 [Mycobacterium marinum M]
Length=381

 Score = 90.1 bits (222),  Expect = 1e-16, Method: Compositional matrix adjust.
 Identities = 55/152 (37%), Positives = 77/152 (51%), Gaps = 1/152 (0%)

Query  4    MIPAEYISNIIYEGPGADSLFFASGQLRELAYSVETTAESLEDELDELDEN-WKGSSSDL  62
            M+P E  S ++Y GPGA SL  A+    ELA  + TTA++ E  L  L    W G +S+ 
Sbjct  5    MLPPEVNSGLMYTGPGAGSLLAAANSWDELAIELGTTAQTYESVLSGLTSMYWAGPASES  64

Query  63   LADAVERYLQWLSKHSSQLKHAAWVINGLANAYNDTRRKVVPPEEIAANREERRRLIASN  122
            +A     Y+ WL   + Q +  A      A A+       VPP  I ANR +   L+A+N
Sbjct  65   MAAKAAPYVWWLHSTAEQTQQTATQCRAAAMAFEQAYAMTVPPPVILANRMQLMSLVATN  124

Query  123  VAGVNTPAIADLDAQYDQYRARNVAVMNAYVS  154
              G NT AIA L+AQY +   ++ A M  Y +
Sbjct  125  FFGQNTAAIAALEAQYAEMWEQDAAAMYGYAT  156


>gi|296168892|ref|ZP_06850562.1| PPE family protein [Mycobacterium parascrofulaceum ATCC BAA-614]
 gi|295896434|gb|EFG76086.1| PPE family protein [Mycobacterium parascrofulaceum ATCC BAA-614]
Length=380

 Score = 90.1 bits (222),  Expect = 1e-16, Method: Compositional matrix adjust.
 Identities = 56/169 (34%), Positives = 89/169 (53%), Gaps = 1/169 (0%)

Query  4    MIPAEYISNIIYEGPGADSLFFASGQLRELAYSVETTAESLEDELDELDENWKGSSSDLL  63
            ++P E  S +I+ GPGA S+  A+G  +EL   +E  A     EL  L   W+G S+  +
Sbjct  10   LLPPEITSALIHSGPGAWSMIAAAGAWQELGAELEAAAAGYSSELAALAGTWQGPSATAM  69

Query  64   ADAVERYLQWLSKHSSQLKHAAWVINGLANAYNDTRRKVVPPEEIAANREERRRLIASNV  123
              A + YL WL   ++Q +  A  +  +  A+  T   VV P  +AANR     L+A+N 
Sbjct  70   VQAFQPYLAWLHTTAAQCQEIAASVQIVTAAFELTHWTVVHPSVVAANRARLAMLLATNF  129

Query  124  AGVNTPAIADLDAQYDQYRARNVAVMNAYVSWTRSALSDLPRWREPPQI  172
             G+N PAIA+ +A+Y+     N   M  Y + + +A+  L ++  PPQ+
Sbjct  130  FGINAPAIAETEAEYNAMWVNNSTAMYRYGATSLNAV-KLSQFSSPPQV  177


>gi|240171260|ref|ZP_04749919.1| PPE family protein [Mycobacterium kansasii ATCC 12478]
Length=472

 Score = 89.0 bits (219),  Expect = 2e-16, Method: Compositional matrix adjust.
 Identities = 58/161 (37%), Positives = 83/161 (52%), Gaps = 0/161 (0%)

Query  4    MIPAEYISNIIYEGPGADSLFFASGQLRELAYSVETTAESLEDELDELDENWKGSSSDLL  63
            ++P E  S  +Y GPG+  +  A+     LA  + +TA S    +  L   W+G SS  +
Sbjct  5    LLPPEINSGRMYAGPGSGPMLTAAEAWDALAAQLYSTAASYSSVITALTATWQGPSSVSM  64

Query  64   ADAVERYLQWLSKHSSQLKHAAWVINGLANAYNDTRRKVVPPEEIAANREERRRLIASNV  123
            A A   Y+ W S  ++Q +  A      A AY  T   +VPP  IAANR E   L+A+N+
Sbjct  65   ATAAAPYMAWTSATAAQSEQTAAQARAAAVAYETTFAAMVPPPVIAANRSELASLVATNI  124

Query  124  AGVNTPAIADLDAQYDQYRARNVAVMNAYVSWTRSALSDLP  164
             G NTPAIA  +AQY Q  A++   MN Y   + +A +  P
Sbjct  125  FGQNTPAIAANEAQYAQMWAQDATAMNNYAGQSAAATTLTP  165


>gi|158667960|gb|ABW76444.1| PPE family protein [Mycobacterium avium subsp. avium]
Length=396

 Score = 87.8 bits (216),  Expect = 5e-16, Method: Compositional matrix adjust.
 Identities = 64/169 (38%), Positives = 94/169 (56%), Gaps = 2/169 (1%)

Query  5    IPAEYISNIIYEGPGADSLFFASGQLRELAYSVETTAESLEDELDELD-ENWKGSSSDLL  63
             P E+ S  IY GPG+ SL  A+     LA  + + A S E  +  L  E W G++S ++
Sbjct  7    FPPEFNSARIYSGPGSGSLVSAASAWSALAAELNSAALSYEQVVTSLSSEEWLGTASAMM  66

Query  64   ADAVERYLQWLSKHSSQLKHAAWVINGLANAYNDTRRKVVPPEEIAANREERRRLIASNV  123
            A AVE Y+ W++  ++Q + AA      A AY       VPP  +A+NR + + L A+NV
Sbjct  67   AQAVEPYIAWMTSAAAQAEEAATQARAAAAAYEAALSSSVPPPLVASNRMQSKLLQATNV  126

Query  124  AGVNTPAIADLDAQYDQYRARNVAVMNAYVSWTRSALSDLPRWREPPQI  172
             G NTP IA L+AQY +Y A++   M +Y   + SA    P ++EPP+I
Sbjct  127  LGQNTPLIAQLEAQYGEYWAQDAGAMYSYAGQSSSATKQTP-FKEPPKI  174


>gi|254820292|ref|ZP_05225293.1| PPE family protein [Mycobacterium intracellulare ATCC 13950]
Length=250

 Score = 87.4 bits (215),  Expect = 7e-16, Method: Compositional matrix adjust.
 Identities = 64/169 (38%), Positives = 94/169 (56%), Gaps = 2/169 (1%)

Query  5    IPAEYISNIIYEGPGADSLFFASGQLRELAYSVETTAESLEDELDELD-ENWKGSSSDLL  63
             P E+ S  IY GPG+ SL  A+     LA  + + A S E  +  L  E W G++S ++
Sbjct  8    FPPEFNSARIYSGPGSGSLVSAASAWSALAAELNSAALSYEQVVTSLSSEEWLGTASAMM  67

Query  64   ADAVERYLQWLSKHSSQLKHAAWVINGLANAYNDTRRKVVPPEEIAANREERRRLIASNV  123
            A AVE Y+ W++  ++Q + AA      A AY       VPP  +A+NR + + L A+NV
Sbjct  68   AQAVEPYIAWMTSAAAQAEEAATQARAAAAAYEAALSSSVPPPLVASNRMQSKLLQATNV  127

Query  124  AGVNTPAIADLDAQYDQYRARNVAVMNAYVSWTRSALSDLPRWREPPQI  172
             G NTP IA L+AQY +Y A++   M +Y   + SA    P ++EPP+I
Sbjct  128  LGQNTPLIAQLEAQYGEYWAQDAGAMYSYAGQSSSATKQTP-FKEPPKI  175


>gi|212596584|gb|ACJ35590.1| PPE23 [Mycobacterium intracellulare ATCC 13950]
Length=312

 Score = 87.4 bits (215),  Expect = 7e-16, Method: Compositional matrix adjust.
 Identities = 64/169 (38%), Positives = 94/169 (56%), Gaps = 2/169 (1%)

Query  5    IPAEYISNIIYEGPGADSLFFASGQLRELAYSVETTAESLEDELDELD-ENWKGSSSDLL  63
             P E+ S  IY GPG+ SL  A+     LA  + + A S E  +  L  E W G++S ++
Sbjct  8    FPPEFNSARIYSGPGSGSLVSAASAWSALAAELNSAALSYEQVVTSLSSEEWLGTASAMM  67

Query  64   ADAVERYLQWLSKHSSQLKHAAWVINGLANAYNDTRRKVVPPEEIAANREERRRLIASNV  123
            A AVE Y+ W++  ++Q + AA      A AY       VPP  +A+NR + + L A+NV
Sbjct  68   AQAVEPYIAWMTSAAAQAEEAATQARAAAAAYEAALSSSVPPPLVASNRMQSKLLQATNV  127

Query  124  AGVNTPAIADLDAQYDQYRARNVAVMNAYVSWTRSALSDLPRWREPPQI  172
             G NTP IA L+AQY +Y A++   M +Y   + SA    P ++EPP+I
Sbjct  128  LGQNTPLIAQLEAQYGEYWAQDAGAMYSYAGQSSSATKQTP-FKEPPKI  175


>gi|296164212|ref|ZP_06846808.1| PPE family protein [Mycobacterium parascrofulaceum ATCC BAA-614]
 gi|295900443|gb|EFG79853.1| PPE family protein [Mycobacterium parascrofulaceum ATCC BAA-614]
Length=273

 Score = 87.4 bits (215),  Expect = 7e-16, Method: Compositional matrix adjust.
 Identities = 58/174 (34%), Positives = 88/174 (51%), Gaps = 2/174 (1%)

Query  4    MIPAEYISNIIYEGPGADSLFFASGQLRELAYSVETTAESLEDELDELDEN-WKGSSSDL  62
            ++P E  S  +Y GPG+  +  A+    ELA ++++TA S + E+  L    W G S+  
Sbjct  5    VLPPEVNSARMYAGPGSGPMLAAAMAWDELAAALQSTANSYQAEITALTSGPWVGPSAAA  64

Query  63   LADAVERYLQWLSKHSSQLKHAAWVINGLANAYNDTRRKVVPPEEIAANREERRRLIASN  122
            +  A+  YL+W+    +Q +  A    G A AY     + VPP  I ANR     L+A+N
Sbjct  65   MVAAIAPYLEWMRTTGAQAEVTATKTRGAAFAYETAFAETVPPPVITANRTLLATLVATN  124

Query  123  VAGVNTPAIADLDAQYDQYRARNVAVMNAYVSWTRSALSDLPRWREPPQIYRGG  176
              G NTPAIA  + +Y +  AR+ A M  Y   T +A + L  + +P Q    G
Sbjct  125  FLGQNTPAIATTETEYAEMWARDTAAMFGYAGSTATA-TRLTPFAQPEQTTNSG  177


>gi|212596187|gb|ACJ35558.1| PPE35 [Mycobacterium avium subsp. avium]
Length=379

 Score = 85.9 bits (211),  Expect = 2e-15, Method: Compositional matrix adjust.
 Identities = 55/169 (33%), Positives = 84/169 (50%), Gaps = 0/169 (0%)

Query  1    MHPMIPAEYISNIIYEGPGADSLFFASGQLRELAYSVETTAESLEDELDELDENWKGSSS  60
            M    P E  S +I+ GPGA SL  A+   + +A  +E +  S    L  L E+W G S+
Sbjct  2    MDLFAPPEVTSTLIHTGPGAGSLIEAAAAWQRVAVELENSVSSYASTLSSLIESWDGPSA  61

Query  61   DLLADAVERYLQWLSKHSSQLKHAAWVINGLANAYNDTRRKVVPPEEIAANREERRRLIA  120
              +  +V+ YL WL + + Q    A      A A+   R  VV P  ++ANR    +L+A
Sbjct  62   MAMLQSVQPYLLWLRETAQQSAQLANSAEAAATAFGTVRSTVVHPSVVSANRTRLAQLLA  121

Query  121  SNVAGVNTPAIADLDAQYDQYRARNVAVMNAYVSWTRSALSDLPRWREP  169
            +N  G NT AIA+ + +Y    A N A ++ Y + +  A S L ++  P
Sbjct  122  TNRFGTNTAAIAETENEYQTMWANNSAALSRYQAASSQATSPLTQFNSP  170


>gi|41409518|ref|NP_962354.1| hypothetical protein MAP3420c [Mycobacterium avium subsp. paratuberculosis 
K-10]
 gi|41398349|gb|AAS05970.1| hypothetical protein MAP_3420c [Mycobacterium avium subsp. paratuberculosis 
K-10]
Length=379

 Score = 85.9 bits (211),  Expect = 2e-15, Method: Compositional matrix adjust.
 Identities = 55/169 (33%), Positives = 84/169 (50%), Gaps = 0/169 (0%)

Query  1    MHPMIPAEYISNIIYEGPGADSLFFASGQLRELAYSVETTAESLEDELDELDENWKGSSS  60
            M    P E  S +I+ GPGA SL  A+   + +A  +E +  S    L  L E+W G S+
Sbjct  2    MDLFAPPEVTSTLIHTGPGAGSLIEAAAAWQRVAVELENSVSSYASTLSSLIESWDGPSA  61

Query  61   DLLADAVERYLQWLSKHSSQLKHAAWVINGLANAYNDTRRKVVPPEEIAANREERRRLIA  120
              +  +V+ YL WL + + Q    A      A A+   R  VV P  ++ANR    +L+A
Sbjct  62   MAMLQSVQPYLLWLRETAQQSAQLANSAEAAATAFGTVRSTVVHPSVVSANRTRLAQLLA  121

Query  121  SNVAGVNTPAIADLDAQYDQYRARNVAVMNAYVSWTRSALSDLPRWREP  169
            +N  G NT AIA+ + +Y    A N A ++ Y + +  A S L ++  P
Sbjct  122  TNRFGTNTAAIAETENEYQTMWANNSAALSRYQAASSQATSPLTQFNSP  170


>gi|118462419|ref|YP_883414.1| PPE family protein [Mycobacterium avium 104]
 gi|118163706|gb|ABK64603.1| PPE family protein [Mycobacterium avium 104]
Length=378

 Score = 85.9 bits (211),  Expect = 2e-15, Method: Compositional matrix adjust.
 Identities = 55/169 (33%), Positives = 84/169 (50%), Gaps = 0/169 (0%)

Query  1    MHPMIPAEYISNIIYEGPGADSLFFASGQLRELAYSVETTAESLEDELDELDENWKGSSS  60
            M    P E  S +I+ GPGA SL  A+   + +A  +E +  S    L  L E+W G S+
Sbjct  1    MDLFAPPEVTSTLIHTGPGAGSLIEAAAAWQRVAVELENSVSSYASTLSSLIESWDGPSA  60

Query  61   DLLADAVERYLQWLSKHSSQLKHAAWVINGLANAYNDTRRKVVPPEEIAANREERRRLIA  120
              +  +V+ YL WL + + Q    A      A A+   R  VV P  ++ANR    +L+A
Sbjct  61   MAMLQSVQPYLLWLRETAQQSAQLANSAEAAATAFGTVRSTVVHPSVVSANRTRLAQLLA  120

Query  121  SNVAGVNTPAIADLDAQYDQYRARNVAVMNAYVSWTRSALSDLPRWREP  169
            +N  G NT AIA+ + +Y    A N A ++ Y + +  A S L ++  P
Sbjct  121  TNRFGTNTAAIAETENEYQTMWANNSAALSRYQAASSQATSPLTQFNSP  169


>gi|254776708|ref|ZP_05218224.1| hypothetical protein MaviaA2_18856 [Mycobacterium avium subsp. 
avium ATCC 25291]
Length=378

 Score = 85.9 bits (211),  Expect = 2e-15, Method: Compositional matrix adjust.
 Identities = 55/169 (33%), Positives = 84/169 (50%), Gaps = 0/169 (0%)

Query  1    MHPMIPAEYISNIIYEGPGADSLFFASGQLRELAYSVETTAESLEDELDELDENWKGSSS  60
            M    P E  S +I+ GPGA SL  A+   + +A  +E +  S    L  L E+W G S+
Sbjct  1    MDLFAPPEVTSTLIHTGPGAGSLIEAAAAWQRVAVELENSVSSYASTLSSLIESWDGPSA  60

Query  61   DLLADAVERYLQWLSKHSSQLKHAAWVINGLANAYNDTRRKVVPPEEIAANREERRRLIA  120
              +  +V+ YL WL + + Q    A      A A+   R  VV P  ++ANR    +L+A
Sbjct  61   MAMLQSVQPYLLWLRETAQQSAQLANSAEAAATAFGTVRSTVVHPSVVSANRTRLAQLLA  120

Query  121  SNVAGVNTPAIADLDAQYDQYRARNVAVMNAYVSWTRSALSDLPRWREP  169
            +N  G NT AIA+ + +Y    A N A ++ Y + +  A S L ++  P
Sbjct  121  TNRFGTNTAAIAETENEYQTMWANNSAALSRYQAASSQATSPLTQFNSP  169


>gi|183981917|ref|YP_001850208.1| PPE family protein [Mycobacterium marinum M]
 gi|183175243|gb|ACC40353.1| PPE family protein [Mycobacterium marinum M]
Length=398

 Score = 85.5 bits (210),  Expect = 3e-15, Method: Compositional matrix adjust.
 Identities = 63/172 (37%), Positives = 91/172 (53%), Gaps = 2/172 (1%)

Query  6    PAEYISNIIYEGPGADSLFFASGQLRELAYSVETTAESLEDELDEL-DENWKGSSSDLLA  64
            P E  S ++Y GPG+ S+  A+     +A  +++ A S E  +  L +E W G +S  +A
Sbjct  7    PPEVTSALMYMGPGSTSMTAAASVWNRVAAELDSAATSYESLVIGLVEEGWLGPASVAMA  66

Query  65   DAVERYLQWLSKHSSQLKHAAWVINGLANAYNDTRRKVVPPEEIAANREERRRLIASNVA  124
            DAV  Y+ W+   ++Q +H A      A AY      VVPP  I+ANR     LIASNV 
Sbjct  67   DAVAPYVVWMRATAAQAEHTAMQARASAAAYETAFGAVVPPPLISANRVRLAELIASNVF  126

Query  125  GVNTPAIADLDAQYDQYRARNVAVMNAYVSWTRSALSDLPRWREPPQIYRGG  176
            G NT  I  L+ +Y Q  A++ A M  Y + T SA ++L  + +P QI   G
Sbjct  127  GQNTAVITALETEYGQMWAQDAAAMYEYAAATSSA-TELTPFTQPQQIVSPG  177


>gi|342861519|ref|ZP_08718166.1| hypothetical protein MCOL_21641 [Mycobacterium colombiense CECT 
3035]
 gi|342131008|gb|EGT84297.1| hypothetical protein MCOL_21641 [Mycobacterium colombiense CECT 
3035]
Length=380

 Score = 84.3 bits (207),  Expect = 5e-15, Method: Compositional matrix adjust.
 Identities = 58/172 (34%), Positives = 85/172 (50%), Gaps = 0/172 (0%)

Query  1    MHPMIPAEYISNIIYEGPGADSLFFASGQLRELAYSVETTAESLEDELDELDENWKGSSS  60
            M    P E  S +I+ GPGA SL  A+G  + LA  +E +  +    L  L E+W G S+
Sbjct  1    MDLFAPPEVTSTLIHTGPGAGSLIEAAGAWQRLAVELENSVSTYASTLSSLIESWDGPSA  60

Query  61   DLLADAVERYLQWLSKHSSQLKHAAWVINGLANAYNDTRRKVVPPEEIAANREERRRLIA  120
              +  +V+ YL WL + + Q    A      A A++ TR  VV P  + ANR    +L+A
Sbjct  61   MAMLQSVQPYLLWLRETAQQAAQMATSAEAAATAFSTTRATVVHPSVVTANRTRLAQLLA  120

Query  121  SNVAGVNTPAIADLDAQYDQYRARNVAVMNAYVSWTRSALSDLPRWREPPQI  172
            +N  G NT AIA+  ++Y    A N A M  Y +    A + L ++  P  I
Sbjct  121  TNRFGTNTAAIAETQSEYQTMWANNSAAMTRYQAAASQATTQLSQFNSPLSI  172


>gi|212596524|gb|ACJ35585.1| PPE16 [Mycobacterium intracellulare ATCC 13950]
Length=404

 Score = 83.6 bits (205),  Expect = 1e-14, Method: Compositional matrix adjust.
 Identities = 60/174 (35%), Positives = 88/174 (51%), Gaps = 2/174 (1%)

Query  4    MIPAEYISNIIYEGPGADSLFFASGQLRELAYSVETTAESLEDELDELDEN-WKGSSSDL  62
            ++P E  S  +Y GPG+  +  A+    ELA ++++TA+S + E+  L    W G S+  
Sbjct  5    VLPPEVNSARMYAGPGSGPMLAAAMAWDELAAALQSTADSYQAEITALTSGPWVGPSAAA  64

Query  63   LADAVERYLQWLSKHSSQLKHAAWVINGLANAYNDTRRKVVPPEEIAANREERRRLIASN  122
            +  A+  YL+W+    +Q + AA      A AY     + VPP  I ANR     L+A+N
Sbjct  65   MTAAITPYLEWMRTTGAQAEEAATQARAAAFAYETAFAETVPPPVITANRTLLASLVATN  124

Query  123  VAGVNTPAIADLDAQYDQYRARNVAVMNAYVSWTRSALSDLPRWREPPQIYRGG  176
              G NTPAIA  + +Y +  AR+ A M  Y   T SA    P + EP Q    G
Sbjct  125  FLGQNTPAIATTETEYAEMWARDTAAMFGYAGSTASATRLTP-FAEPDQTTNPG  177



Lambda     K      H
   0.314    0.130    0.384 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 149040830208


  Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
    Posted date:  Sep 5, 2011  4:36 AM
  Number of letters in database: 5,219,829,388
  Number of sequences in database:  15,229,318



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40