BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv3427c
Length=251
Score E
Sequences producing significant alignments: (Bits) Value
gi|298526909|ref|ZP_07014318.1| transposase [Mycobacterium tuber... 510 8e-143
gi|148824633|ref|YP_001289387.1| transposase [Mycobacterium tube... 510 9e-143
gi|289444915|ref|ZP_06434659.1| transposase [Mycobacterium tuber... 510 9e-143
gi|15610563|ref|NP_217944.1| transposase [Mycobacterium tubercul... 510 1e-142
gi|289449125|ref|ZP_06438869.1| transposase [Mycobacterium tuber... 509 1e-142
gi|289576159|ref|ZP_06456386.1| LOW QUALITY PROTEIN: transposase... 509 1e-142
gi|289571653|ref|ZP_06451880.1| transposase [Mycobacterium tuber... 508 2e-142
gi|262200380|ref|YP_003271588.1| IstB domain-containing protein ... 401 4e-110
gi|331693915|ref|YP_004330154.1| IstB domain-containing protein ... 355 5e-96
gi|256393040|ref|YP_003114604.1| IstB domain-containing protein ... 348 6e-94
gi|331697055|ref|YP_004333294.1| IstB domain-containing protein ... 342 4e-92
gi|85859556|ref|YP_461758.1| istB-like ATP binding protein [Synt... 228 8e-58
gi|239907546|ref|YP_002954287.1| putative transposase orfB for i... 176 2e-42
gi|258404767|ref|YP_003197509.1| IstB domain-containing protein ... 174 1e-41
gi|239906081|ref|YP_002952820.1| putative transposase orfB [Desu... 170 2e-40
gi|283853954|ref|ZP_06371155.1| IstB domain protein ATP-binding ... 169 2e-40
gi|297568316|ref|YP_003689660.1| IstB domain protein ATP-binding... 169 3e-40
gi|297568976|ref|YP_003690320.1| ATPase AAA [Desulfurivibrio alk... 168 5e-40
gi|187921088|ref|YP_001890120.1| IstB domain-containing protein ... 168 8e-40
gi|186473710|ref|YP_001861052.1| IstB ATP binding domain-contain... 167 1e-39
gi|296163780|ref|ZP_06846479.1| IstB domain protein ATP-binding ... 167 1e-39
gi|91784013|ref|YP_559219.1| putative transposase-related ATP-bi... 167 2e-39
gi|156519338|gb|ABU68844.1| IstB [Thauera butanivorans] 166 4e-39
gi|134293018|ref|YP_001116754.1| IstB ATP binding domain-contain... 164 9e-39
gi|338530181|ref|YP_004663515.1| IS21 family transposition helpe... 164 1e-38
gi|167567998|ref|ZP_02360914.1| transposition helper protein [Bu... 162 3e-38
gi|317124006|ref|YP_004098118.1| IstB domain protein ATP-binding... 162 4e-38
gi|56475551|ref|YP_157140.1| transposition helper protein [Aroma... 160 1e-37
gi|56476944|ref|YP_158533.1| transposition helper protein [Aroma... 160 1e-37
gi|187921170|ref|YP_001890202.1| IstB domain-containing protein ... 160 2e-37
gi|291286209|ref|YP_003503025.1| IstB domain-containing protein ... 158 6e-37
gi|257091568|ref|YP_003165211.1| hypothetical protein CAP2UW1_46... 157 1e-36
gi|161521277|ref|YP_001584704.1| IstB ATP binding domain-contain... 157 1e-36
gi|340780948|ref|YP_004747555.1| IstB domain-containing protein ... 153 2e-35
gi|222528180|ref|YP_002572062.1| IstB domain-containing protein ... 152 4e-35
gi|344200423|ref|YP_004784749.1| IstB domain-containing protein ... 151 8e-35
gi|257093057|ref|YP_003166698.1| IstB domain-containing protein ... 150 2e-34
gi|257091746|ref|YP_003165387.1| IstB domain-containing protein ... 149 4e-34
gi|146295117|ref|YP_001178888.1| IstB ATP binding domain-contain... 149 5e-34
gi|257093316|ref|YP_003166957.1| IstB domain-containing protein ... 148 6e-34
gi|146295135|ref|YP_001178906.1| IstB ATP binding domain-contain... 148 9e-34
gi|257093652|ref|YP_003167293.1| IstB domain-containing protein ... 147 1e-33
gi|344995591|ref|YP_004797934.1| IstB domain-containing protein ... 147 1e-33
gi|222529829|ref|YP_002573711.1| IstB domain-containing protein ... 147 1e-33
gi|312114022|ref|YP_004011618.1| IstB domain-containing protein ... 145 5e-33
gi|148240883|ref|YP_001220384.1| putative insertion sequence IS2... 144 1e-32
gi|332662477|ref|YP_004445265.1| IstB domain-containing protein ... 143 3e-32
gi|312115167|ref|YP_004012763.1| IstB domain-containing protein ... 143 3e-32
gi|327399401|ref|YP_004340270.1| IstB domain-containing protein ... 141 1e-31
gi|327398560|ref|YP_004339429.1| IstB domain-containing protein ... 140 2e-31
>gi|298526909|ref|ZP_07014318.1| transposase [Mycobacterium tuberculosis 94_M4241A]
gi|298496703|gb|EFI31997.1| transposase [Mycobacterium tuberculosis 94_M4241A]
Length=694
Score = 510 bits (1313), Expect = 8e-143, Method: Compositional matrix adjust.
Identities = 251/251 (100%), Positives = 251/251 (100%), Gaps = 0/251 (0%)
Query 1 MSICDPALRNALRTLKLSGMLDTLDARLAQTRNGDLGHLEFLQALREDEIARRESAALTR 60
MSICDPALRNALRTLKLSGMLDTLDARLAQTRNGDLGHLEFLQALREDEIARRESAALTR
Sbjct 444 MSICDPALRNALRTLKLSGMLDTLDARLAQTRNGDLGHLEFLQALREDEIARRESAALTR 503
Query 61 RLRRAKFEAQATFEDFDFTANPKLPGAMLRDLAALRWLDAGESVILHGPVGVGKTHVAQA 120
RLRRAKFEAQATFEDFDFTANPKLPGAMLRDLAALRWLDAGESVILHGPVGVGKTHVAQA
Sbjct 504 RLRRAKFEAQATFEDFDFTANPKLPGAMLRDLAALRWLDAGESVILHGPVGVGKTHVAQA 563
Query 121 LVHAVARRGGDVRFAKTSRMLSDLAGGHADRSWGQRIREYTKPLVLILDDFAMREHTAMH 180
LVHAVARRGGDVRFAKTSRMLSDLAGGHADRSWGQRIREYTKPLVLILDDFAMREHTAMH
Sbjct 564 LVHAVARRGGDVRFAKTSRMLSDLAGGHADRSWGQRIREYTKPLVLILDDFAMREHTAMH 623
Query 181 ADDLYELISDRAITGKPLILTSNRAPNNWYGLFPNPVVAESLLDRLINTSHQILMDGPSY 240
ADDLYELISDRAITGKPLILTSNRAPNNWYGLFPNPVVAESLLDRLINTSHQILMDGPSY
Sbjct 624 ADDLYELISDRAITGKPLILTSNRAPNNWYGLFPNPVVAESLLDRLINTSHQILMDGPSY 683
Query 241 RPRKRPGRTTS 251
RPRKRPGRTTS
Sbjct 684 RPRKRPGRTTS 694
>gi|148824633|ref|YP_001289387.1| transposase [Mycobacterium tuberculosis F11]
gi|289747257|ref|ZP_06506635.1| transposase [Mycobacterium tuberculosis 02_1987]
gi|148723160|gb|ABR07785.1| transposase [Mycobacterium tuberculosis F11]
gi|289687785|gb|EFD55273.1| transposase [Mycobacterium tuberculosis 02_1987]
Length=694
Score = 510 bits (1313), Expect = 9e-143, Method: Compositional matrix adjust.
Identities = 251/251 (100%), Positives = 251/251 (100%), Gaps = 0/251 (0%)
Query 1 MSICDPALRNALRTLKLSGMLDTLDARLAQTRNGDLGHLEFLQALREDEIARRESAALTR 60
MSICDPALRNALRTLKLSGMLDTLDARLAQTRNGDLGHLEFLQALREDEIARRESAALTR
Sbjct 444 MSICDPALRNALRTLKLSGMLDTLDARLAQTRNGDLGHLEFLQALREDEIARRESAALTR 503
Query 61 RLRRAKFEAQATFEDFDFTANPKLPGAMLRDLAALRWLDAGESVILHGPVGVGKTHVAQA 120
RLRRAKFEAQATFEDFDFTANPKLPGAMLRDLAALRWLDAGESVILHGPVGVGKTHVAQA
Sbjct 504 RLRRAKFEAQATFEDFDFTANPKLPGAMLRDLAALRWLDAGESVILHGPVGVGKTHVAQA 563
Query 121 LVHAVARRGGDVRFAKTSRMLSDLAGGHADRSWGQRIREYTKPLVLILDDFAMREHTAMH 180
LVHAVARRGGDVRFAKTSRMLSDLAGGHADRSWGQRIREYTKPLVLILDDFAMREHTAMH
Sbjct 564 LVHAVARRGGDVRFAKTSRMLSDLAGGHADRSWGQRIREYTKPLVLILDDFAMREHTAMH 623
Query 181 ADDLYELISDRAITGKPLILTSNRAPNNWYGLFPNPVVAESLLDRLINTSHQILMDGPSY 240
ADDLYELISDRAITGKPLILTSNRAPNNWYGLFPNPVVAESLLDRLINTSHQILMDGPSY
Sbjct 624 ADDLYELISDRAITGKPLILTSNRAPNNWYGLFPNPVVAESLLDRLINTSHQILMDGPSY 683
Query 241 RPRKRPGRTTS 251
RPRKRPGRTTS
Sbjct 684 RPRKRPGRTTS 694
>gi|289444915|ref|ZP_06434659.1| transposase [Mycobacterium tuberculosis T46]
gi|289417834|gb|EFD15074.1| transposase [Mycobacterium tuberculosis T46]
Length=694
Score = 510 bits (1313), Expect = 9e-143, Method: Compositional matrix adjust.
Identities = 251/251 (100%), Positives = 251/251 (100%), Gaps = 0/251 (0%)
Query 1 MSICDPALRNALRTLKLSGMLDTLDARLAQTRNGDLGHLEFLQALREDEIARRESAALTR 60
MSICDPALRNALRTLKLSGMLDTLDARLAQTRNGDLGHLEFLQALREDEIARRESAALTR
Sbjct 444 MSICDPALRNALRTLKLSGMLDTLDARLAQTRNGDLGHLEFLQALREDEIARRESAALTR 503
Query 61 RLRRAKFEAQATFEDFDFTANPKLPGAMLRDLAALRWLDAGESVILHGPVGVGKTHVAQA 120
RLRRAKFEAQATFEDFDFTANPKLPGAMLRDLAALRWLDAGESVILHGPVGVGKTHVAQA
Sbjct 504 RLRRAKFEAQATFEDFDFTANPKLPGAMLRDLAALRWLDAGESVILHGPVGVGKTHVAQA 563
Query 121 LVHAVARRGGDVRFAKTSRMLSDLAGGHADRSWGQRIREYTKPLVLILDDFAMREHTAMH 180
LVHAVARRGGDVRFAKTSRMLSDLAGGHADRSWGQRIREYTKPLVLILDDFAMREHTAMH
Sbjct 564 LVHAVARRGGDVRFAKTSRMLSDLAGGHADRSWGQRIREYTKPLVLILDDFAMREHTAMH 623
Query 181 ADDLYELISDRAITGKPLILTSNRAPNNWYGLFPNPVVAESLLDRLINTSHQILMDGPSY 240
ADDLYELISDRAITGKPLILTSNRAPNNWYGLFPNPVVAESLLDRLINTSHQILMDGPSY
Sbjct 624 ADDLYELISDRAITGKPLILTSNRAPNNWYGLFPNPVVAESLLDRLINTSHQILMDGPSY 683
Query 241 RPRKRPGRTTS 251
RPRKRPGRTTS
Sbjct 684 RPRKRPGRTTS 694
>gi|15610563|ref|NP_217944.1| transposase [Mycobacterium tuberculosis H37Rv]
gi|148663291|ref|YP_001284814.1| ISMt2 transposase B [Mycobacterium tuberculosis H37Ra]
gi|167968684|ref|ZP_02550961.1| transposase [Mycobacterium tuberculosis H37Ra]
24 more sequence titles
Length=251
Score = 510 bits (1313), Expect = 1e-142, Method: Compositional matrix adjust.
Identities = 251/251 (100%), Positives = 251/251 (100%), Gaps = 0/251 (0%)
Query 1 MSICDPALRNALRTLKLSGMLDTLDARLAQTRNGDLGHLEFLQALREDEIARRESAALTR 60
MSICDPALRNALRTLKLSGMLDTLDARLAQTRNGDLGHLEFLQALREDEIARRESAALTR
Sbjct 1 MSICDPALRNALRTLKLSGMLDTLDARLAQTRNGDLGHLEFLQALREDEIARRESAALTR 60
Query 61 RLRRAKFEAQATFEDFDFTANPKLPGAMLRDLAALRWLDAGESVILHGPVGVGKTHVAQA 120
RLRRAKFEAQATFEDFDFTANPKLPGAMLRDLAALRWLDAGESVILHGPVGVGKTHVAQA
Sbjct 61 RLRRAKFEAQATFEDFDFTANPKLPGAMLRDLAALRWLDAGESVILHGPVGVGKTHVAQA 120
Query 121 LVHAVARRGGDVRFAKTSRMLSDLAGGHADRSWGQRIREYTKPLVLILDDFAMREHTAMH 180
LVHAVARRGGDVRFAKTSRMLSDLAGGHADRSWGQRIREYTKPLVLILDDFAMREHTAMH
Sbjct 121 LVHAVARRGGDVRFAKTSRMLSDLAGGHADRSWGQRIREYTKPLVLILDDFAMREHTAMH 180
Query 181 ADDLYELISDRAITGKPLILTSNRAPNNWYGLFPNPVVAESLLDRLINTSHQILMDGPSY 240
ADDLYELISDRAITGKPLILTSNRAPNNWYGLFPNPVVAESLLDRLINTSHQILMDGPSY
Sbjct 181 ADDLYELISDRAITGKPLILTSNRAPNNWYGLFPNPVVAESLLDRLINTSHQILMDGPSY 240
Query 241 RPRKRPGRTTS 251
RPRKRPGRTTS
Sbjct 241 RPRKRPGRTTS 251
>gi|289449125|ref|ZP_06438869.1| transposase [Mycobacterium tuberculosis CPHL_A]
gi|289422083|gb|EFD19284.1| transposase [Mycobacterium tuberculosis CPHL_A]
Length=724
Score = 509 bits (1311), Expect = 1e-142, Method: Compositional matrix adjust.
Identities = 251/251 (100%), Positives = 251/251 (100%), Gaps = 0/251 (0%)
Query 1 MSICDPALRNALRTLKLSGMLDTLDARLAQTRNGDLGHLEFLQALREDEIARRESAALTR 60
MSICDPALRNALRTLKLSGMLDTLDARLAQTRNGDLGHLEFLQALREDEIARRESAALTR
Sbjct 474 MSICDPALRNALRTLKLSGMLDTLDARLAQTRNGDLGHLEFLQALREDEIARRESAALTR 533
Query 61 RLRRAKFEAQATFEDFDFTANPKLPGAMLRDLAALRWLDAGESVILHGPVGVGKTHVAQA 120
RLRRAKFEAQATFEDFDFTANPKLPGAMLRDLAALRWLDAGESVILHGPVGVGKTHVAQA
Sbjct 534 RLRRAKFEAQATFEDFDFTANPKLPGAMLRDLAALRWLDAGESVILHGPVGVGKTHVAQA 593
Query 121 LVHAVARRGGDVRFAKTSRMLSDLAGGHADRSWGQRIREYTKPLVLILDDFAMREHTAMH 180
LVHAVARRGGDVRFAKTSRMLSDLAGGHADRSWGQRIREYTKPLVLILDDFAMREHTAMH
Sbjct 594 LVHAVARRGGDVRFAKTSRMLSDLAGGHADRSWGQRIREYTKPLVLILDDFAMREHTAMH 653
Query 181 ADDLYELISDRAITGKPLILTSNRAPNNWYGLFPNPVVAESLLDRLINTSHQILMDGPSY 240
ADDLYELISDRAITGKPLILTSNRAPNNWYGLFPNPVVAESLLDRLINTSHQILMDGPSY
Sbjct 654 ADDLYELISDRAITGKPLILTSNRAPNNWYGLFPNPVVAESLLDRLINTSHQILMDGPSY 713
Query 241 RPRKRPGRTTS 251
RPRKRPGRTTS
Sbjct 714 RPRKRPGRTTS 724
>gi|289576159|ref|ZP_06456386.1| LOW QUALITY PROTEIN: transposase [Mycobacterium tuberculosis
K85]
gi|289540590|gb|EFD45168.1| LOW QUALITY PROTEIN: transposase [Mycobacterium tuberculosis
K85]
Length=644
Score = 509 bits (1311), Expect = 1e-142, Method: Compositional matrix adjust.
Identities = 251/251 (100%), Positives = 251/251 (100%), Gaps = 0/251 (0%)
Query 1 MSICDPALRNALRTLKLSGMLDTLDARLAQTRNGDLGHLEFLQALREDEIARRESAALTR 60
MSICDPALRNALRTLKLSGMLDTLDARLAQTRNGDLGHLEFLQALREDEIARRESAALTR
Sbjct 394 MSICDPALRNALRTLKLSGMLDTLDARLAQTRNGDLGHLEFLQALREDEIARRESAALTR 453
Query 61 RLRRAKFEAQATFEDFDFTANPKLPGAMLRDLAALRWLDAGESVILHGPVGVGKTHVAQA 120
RLRRAKFEAQATFEDFDFTANPKLPGAMLRDLAALRWLDAGESVILHGPVGVGKTHVAQA
Sbjct 454 RLRRAKFEAQATFEDFDFTANPKLPGAMLRDLAALRWLDAGESVILHGPVGVGKTHVAQA 513
Query 121 LVHAVARRGGDVRFAKTSRMLSDLAGGHADRSWGQRIREYTKPLVLILDDFAMREHTAMH 180
LVHAVARRGGDVRFAKTSRMLSDLAGGHADRSWGQRIREYTKPLVLILDDFAMREHTAMH
Sbjct 514 LVHAVARRGGDVRFAKTSRMLSDLAGGHADRSWGQRIREYTKPLVLILDDFAMREHTAMH 573
Query 181 ADDLYELISDRAITGKPLILTSNRAPNNWYGLFPNPVVAESLLDRLINTSHQILMDGPSY 240
ADDLYELISDRAITGKPLILTSNRAPNNWYGLFPNPVVAESLLDRLINTSHQILMDGPSY
Sbjct 574 ADDLYELISDRAITGKPLILTSNRAPNNWYGLFPNPVVAESLLDRLINTSHQILMDGPSY 633
Query 241 RPRKRPGRTTS 251
RPRKRPGRTTS
Sbjct 634 RPRKRPGRTTS 644
>gi|289571653|ref|ZP_06451880.1| transposase [Mycobacterium tuberculosis T17]
gi|289545407|gb|EFD49055.1| transposase [Mycobacterium tuberculosis T17]
Length=251
Score = 508 bits (1309), Expect = 2e-142, Method: Compositional matrix adjust.
Identities = 250/251 (99%), Positives = 251/251 (100%), Gaps = 0/251 (0%)
Query 1 MSICDPALRNALRTLKLSGMLDTLDARLAQTRNGDLGHLEFLQALREDEIARRESAALTR 60
MSICDPALRNALRTLKLSGMLDTLDAR+AQTRNGDLGHLEFLQALREDEIARRESAALTR
Sbjct 1 MSICDPALRNALRTLKLSGMLDTLDARVAQTRNGDLGHLEFLQALREDEIARRESAALTR 60
Query 61 RLRRAKFEAQATFEDFDFTANPKLPGAMLRDLAALRWLDAGESVILHGPVGVGKTHVAQA 120
RLRRAKFEAQATFEDFDFTANPKLPGAMLRDLAALRWLDAGESVILHGPVGVGKTHVAQA
Sbjct 61 RLRRAKFEAQATFEDFDFTANPKLPGAMLRDLAALRWLDAGESVILHGPVGVGKTHVAQA 120
Query 121 LVHAVARRGGDVRFAKTSRMLSDLAGGHADRSWGQRIREYTKPLVLILDDFAMREHTAMH 180
LVHAVARRGGDVRFAKTSRMLSDLAGGHADRSWGQRIREYTKPLVLILDDFAMREHTAMH
Sbjct 121 LVHAVARRGGDVRFAKTSRMLSDLAGGHADRSWGQRIREYTKPLVLILDDFAMREHTAMH 180
Query 181 ADDLYELISDRAITGKPLILTSNRAPNNWYGLFPNPVVAESLLDRLINTSHQILMDGPSY 240
ADDLYELISDRAITGKPLILTSNRAPNNWYGLFPNPVVAESLLDRLINTSHQILMDGPSY
Sbjct 181 ADDLYELISDRAITGKPLILTSNRAPNNWYGLFPNPVVAESLLDRLINTSHQILMDGPSY 240
Query 241 RPRKRPGRTTS 251
RPRKRPGRTTS
Sbjct 241 RPRKRPGRTTS 251
>gi|262200380|ref|YP_003271588.1| IstB domain-containing protein ATP-binding protein [Gordonia
bronchialis DSM 43247]
gi|262201283|ref|YP_003272491.1| IstB domain-containing protein ATP-binding protein [Gordonia
bronchialis DSM 43247]
gi|262201832|ref|YP_003273040.1| IstB domain-containing protein ATP-binding protein [Gordonia
bronchialis DSM 43247]
gi|262204082|ref|YP_003275290.1| IstB domain-containing protein ATP-binding protein [Gordonia
bronchialis DSM 43247]
gi|262083727|gb|ACY19695.1| IstB domain protein ATP-binding protein [Gordonia bronchialis
DSM 43247]
gi|262084630|gb|ACY20598.1| IstB domain protein ATP-binding protein [Gordonia bronchialis
DSM 43247]
gi|262085179|gb|ACY21147.1| IstB domain protein ATP-binding protein [Gordonia bronchialis
DSM 43247]
gi|262087429|gb|ACY23397.1| IstB domain protein ATP-binding protein [Gordonia bronchialis
DSM 43247]
Length=253
Score = 401 bits (1031), Expect = 4e-110, Method: Compositional matrix adjust.
Identities = 204/249 (82%), Positives = 225/249 (91%), Gaps = 0/249 (0%)
Query 1 MSICDPALRNALRTLKLSGMLDTLDARLAQTRNGDLGHLEFLQALREDEIARRESAALTR 60
M+I DP+LR AL+TLKL+GMLDTLDARLAQTR G+LGHLEFLQ L EDEIARRESAAL R
Sbjct 1 MTIHDPSLRAALKTLKLTGMLDTLDARLAQTRAGELGHLEFLQVLCEDEIARRESAALAR 60
Query 61 RLRRAKFEAQATFEDFDFTANPKLPGAMLRDLAALRWLDAGESVILHGPVGVGKTHVAQA 120
R+RRA+FE ATF+DFDFTANPKLP AMLRDLAALRWLDAGESVIL+GPVGVGKTHVAQA
Sbjct 61 RVRRARFEQSATFDDFDFTANPKLPAAMLRDLAALRWLDAGESVILYGPVGVGKTHVAQA 120
Query 121 LVHAVARRGGDVRFAKTSRMLSDLAGGHADRSWGQRIREYTKPLVLILDDFAMREHTAMH 180
L H VA RG D+RF K +RML+DLAGGHADR+ GQR+REYT+P VLI+DDFAMREHT
Sbjct 121 LGHQVALRGHDIRFVKCARMLADLAGGHADRTIGQRMREYTRPAVLIIDDFAMREHTTTG 180
Query 181 ADDLYELISDRAITGKPLILTSNRAPNNWYGLFPNPVVAESLLDRLINTSHQILMDGPSY 240
+DDLY+L+SDRAI KP+ILTSNRAP +WY LFPNPVVAESLLDRLINTSHQILMDGPSY
Sbjct 181 SDDLYDLVSDRAIAAKPVILTSNRAPKDWYPLFPNPVVAESLLDRLINTSHQILMDGPSY 240
Query 241 RPRKRPGRT 249
RPRKRPGRT
Sbjct 241 RPRKRPGRT 249
>gi|331693915|ref|YP_004330154.1| IstB domain-containing protein ATP-binding protein [Pseudonocardia
dioxanivorans CB1190]
gi|326948604|gb|AEA22301.1| IstB domain protein ATP-binding protein [Pseudonocardia dioxanivorans
CB1190]
Length=270
Score = 355 bits (910), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 172/245 (71%), Positives = 198/245 (81%), Gaps = 0/245 (0%)
Query 3 ICDPALRNALRTLKLSGMLDTLDARLAQTRNGDLGHLEFLQALREDEIARRESAALTRRL 62
I D L ALR LKLSGM +TLDARLAQ R G+LGHLEFLQ L DEIARRE+ A+TRR+
Sbjct 2 IIDAQLHQALRALKLSGMRETLDARLAQARAGELGHLEFLQVLCHDEIARRETQAITRRI 61
Query 63 RRAKFEAQATFEDFDFTANPKLPGAMLRDLAALRWLDAGESVILHGPVGVGKTHVAQALV 122
RRA+FE+QAT E+FDF A+PKLP A +RDLAALRWL AGESVIL+GPVGVGKTHVAQAL
Sbjct 62 RRAQFESQATLEEFDFAASPKLPAAQIRDLAALRWLAAGESVILYGPVGVGKTHVAQALG 121
Query 123 HAVARRGGDVRFAKTSRMLSDLAGGHADRSWGQRIREYTKPLVLILDDFAMREHTAMHAD 182
R GGDVRF KTSR+L+ LAGGH DR+W +R+ E +P VLI DDF MRE T AD
Sbjct 122 RLAIRHGGDVRFTKTSRLLATLAGGHTDRTWDRRLAELVRPAVLICDDFGMRELTPAQAD 181
Query 183 DLYELISDRAITGKPLILTSNRAPNNWYGLFPNPVVAESLLDRLINTSHQILMDGPSYRP 242
DLYEL+ RA G+ L+LTSNR+P +WY LFPNPVVAESLLDRLINTSHQ+ M+GPSYRP
Sbjct 182 DLYELVCARAAAGRSLVLTSNRSPVDWYPLFPNPVVAESLLDRLINTSHQVFMNGPSYRP 241
Query 243 RKRPG 247
++RP
Sbjct 242 KQRPA 246
>gi|256393040|ref|YP_003114604.1| IstB domain-containing protein ATP-binding protein [Catenulispora
acidiphila DSM 44928]
gi|256359266|gb|ACU72763.1| IstB domain protein ATP-binding protein [Catenulispora acidiphila
DSM 44928]
Length=263
Score = 348 bits (892), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 168/250 (68%), Positives = 203/250 (82%), Gaps = 2/250 (0%)
Query 1 MSICDPALRNALRTLKLSGMLDTLDARLAQTRNGDLGHLEFLQALREDEIARRESAALTR 60
M+ ALR +L+ L+LSGML+TLDARL Q G+LGHLEFLQ L +D+I RRE+ A R
Sbjct 1 MNPIGNALRESLKALRLSGMLETLDARLIQAHGGELGHLEFLQVLCQDKITRRETVAFQR 60
Query 61 RLRRAKFEAQATFEDFDFTANPKLPGAMLRDLAALRWLDAGESVILHGPVGVGKTHVAQA 120
RL++A+FE Q T E+FDF A+ KLP A +RDL+ALRWL AGESVIL GPVGVGKTHVAQ
Sbjct 61 RLQKARFEQQVTLEEFDFNASSKLPAAQIRDLSALRWLHAGESVILFGPVGVGKTHVAQG 120
Query 121 LVHAVARRGGDVRFAKTSRMLSDLAGGHADRSWGQRIREYTKPLVLILDDFAMREHTAMH 180
L H R+G V+FAKTSR+L+DLAGGHADR+W +R+RE +P VLILDDFAMR+ TA
Sbjct 121 LGHLAVRQGAAVQFAKTSRVLADLAGGHADRTWDKRVRELVRPDVLILDDFAMRQMTAPQ 180
Query 181 ADDLYELISDRAITGKPLILTSNRAPNNWYGLFPNPVVAESLLDRLINTSHQILMDGPSY 240
ADDLYEL+S+R G+ LI+TSNRAP++WY LFPNPVVAESLLDRLINTSHQ++M+GPSY
Sbjct 181 ADDLYELVSER--QGRSLIITSNRAPSDWYPLFPNPVVAESLLDRLINTSHQVIMNGPSY 238
Query 241 RPRKRPGRTT 250
RP KRP +T
Sbjct 239 RPNKRPKNST 248
>gi|331697055|ref|YP_004333294.1| IstB domain-containing protein ATP-binding protein [Pseudonocardia
dioxanivorans CB1190]
gi|326951744|gb|AEA25441.1| IstB domain protein ATP-binding protein [Pseudonocardia dioxanivorans
CB1190]
Length=255
Score = 342 bits (876), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 181/246 (74%), Positives = 200/246 (82%), Gaps = 2/246 (0%)
Query 4 CDPALRNALRTLKLSGMLDTLDARLAQTRNGDLGHLEFLQALREDEIARRESAALTRRLR 63
D LR ALR LKLSGMLDTLDARLAQ R G+LGHL+FLQ L +DE+ARR+ AA RRLR
Sbjct 3 ADDGLRGALRALKLSGMLDTLDARLAQARAGELGHLDFLQVLCQDEVARRDQAAFARRLR 62
Query 64 RAKFEAQATFEDFDFTANPKLPGAMLRDLAALRWLDAGESVILHGPVGVGKTHVAQALVH 123
RA FE Q T E FDF ANPKLP A +RDLAALRWLDAGESVIL GPVGVGKT VAQAL H
Sbjct 63 RAHFEEQVTLEGFDFHANPKLPAAQIRDLAALRWLDAGESVILTGPVGVGKTFVAQALGH 122
Query 124 AVARRGGDVRFAKTSRMLSDLAGGHADRSWGQRIREYTKPLVLILDDFAMREHTAMHADD 183
R G DVRFAKTSR+L++LAGGHAD SW +R+RE +P VLILDDF MRE TA ADD
Sbjct 123 QAIRHGADVRFAKTSRVLAELAGGHADHSWARRLRELARPAVLILDDFGMRELTAAQADD 182
Query 184 LYELISDRAITGKPLILTSNRAPNNWYGLFPNPVVAESLLDRLINTSHQILMDGPSYRPR 243
LYELI++RA G+ L+LTSNR+P +WY LFPNPVVAESLLDRLINTSH I M+G SYRPR
Sbjct 183 LYELINERA--GRSLVLTSNRSPVDWYPLFPNPVVAESLLDRLINTSHHIHMNGASYRPR 240
Query 244 KRPGRT 249
KRPGR
Sbjct 241 KRPGRV 246
>gi|85859556|ref|YP_461758.1| istB-like ATP binding protein [Syntrophus aciditrophicus SB]
gi|85722647|gb|ABC77590.1| istB-like ATP binding protein [Syntrophus aciditrophicus SB]
Length=255
Score = 228 bits (580), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 111/247 (45%), Positives = 159/247 (65%), Gaps = 1/247 (0%)
Query 5 DPALRNALRTLKLSGMLDTLDARLAQTRNGDLGHLEFLQALREDEIARRESAALTRRLRR 64
D L+ LRTL+LSG L++LD RL Q + LG+LEFLQ L +DE+ RRE+ L R+ R
Sbjct 4 DHQLKEQLRTLRLSGFLESLDLRLQQAQKDSLGYLEFLQVLLQDEVERREAKKLNLRICR 63
Query 65 AKFEAQATFEDFDFTANPKLPGAMLRDLAALRWLDAGESVILHGPVGVGKTHVAQALVHA 124
A FE + T E FDF+ NPK+ ++RDL +++ E V+L GP GVGKTH+AQA+ H
Sbjct 64 ACFEEEKTLEGFDFSFNPKISAKVVRDLCRCTFIEKHEHVLLCGPSGVGKTHIAQAIGHH 123
Query 125 VARRGGDVRFAKTSRMLSDLAGGHADRSWGQRIREYTKPLVLILDDFAMREHTAMHADDL 184
R G DV F K ++ L G AD+SW +R++ Y P +LI+DDF + + A+D
Sbjct 124 ACRLGHDVLFTKAVKLFRVLLAGRADQSWEKRMKRYLAPDLLIIDDFGLSALNPLQAEDF 183
Query 185 YELISDRAITGKPLILTSNRAPNNWYGLFPNPVVAESLLDRLINTSHQILMDGPSYRPRK 244
YE+I++R + +I+TSNR P +W LFP+PV+A S LDRL + +H ++ +G SYR
Sbjct 184 YEIIAERYLRSS-IIITSNRPPQDWLPLFPDPVMANSALDRLAHNAHHLITEGDSYRRIL 242
Query 245 RPGRTTS 251
+P + S
Sbjct 243 KPKISPS 249
>gi|239907546|ref|YP_002954287.1| putative transposase orfB for insertion sequence element [Desulfovibrio
magneticus RS-1]
gi|239797412|dbj|BAH76401.1| putative transposase orfB for insertion sequence element [Desulfovibrio
magneticus RS-1]
Length=264
Score = 176 bits (447), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 90/236 (39%), Positives = 145/236 (62%), Gaps = 1/236 (0%)
Query 6 PALRNALRTLKLSGMLDTLDARLAQTRNGDLGHLEFLQALREDEIARRESAALTRRLRRA 65
PAL AL+ L+LSG+LD+++ R Q L H+EFL L +DE+ARRE + R+RRA
Sbjct 11 PALEPALKQLRLSGILDSMEIRNKQAIEDGLSHVEFLAMLIQDEVARREQKKFSLRVRRA 70
Query 66 KFEAQATFEDFDFTANPKLPGAMLRDLAALRWLDAGESVILHGPVGVGKTHVAQALVHAV 125
F ++ T E FDF+ NP + A++ DLA R+L+ V++ GP G GK+H+AQAL HA
Sbjct 71 GFRSEKTLESFDFSYNPSINKALVLDLATCRFLEEKAPVLIVGPCGTGKSHIAQALGHAA 130
Query 126 ARRGGDVRFAKTSRMLSDLAGGHADRSWGQRIREYTKPLVLILDDFAMREHTAMHADDLY 185
AR+G +V F S++L L A S+ +++ K VLI+DDF ++ + +D +
Sbjct 131 ARKGYEVLFTPVSKLLGMLQAAKATNSYDRKLSALAKTDVLIIDDFGLKPFKSSEDEDFH 190
Query 186 ELISDRAITGKPLILTSNRAPNNWYGLFPNPVVAESLLDRLINTSHQILMDGPSYR 241
+LI++R ++TSN + W F N ++ + LDR+ + +++++++G SYR
Sbjct 191 DLIAER-YERFATVITSNLDFSEWGEAFNNKLLGAATLDRIRHGAYKVILEGRSYR 245
>gi|258404767|ref|YP_003197509.1| IstB domain-containing protein ATP-binding protein [Desulfohalobium
retbaense DSM 5692]
gi|257796994|gb|ACV67931.1| IstB domain protein ATP-binding protein [Desulfohalobium retbaense
DSM 5692]
Length=275
Score = 174 bits (440), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 90/239 (38%), Positives = 141/239 (59%), Gaps = 1/239 (0%)
Query 6 PALRNALRTLKLSGMLDTLDARLAQTRNGDLGHLEFLQALREDEIARRESAALTRRLRRA 65
P + L+ L+LSGMLD+L+ R Q + + + EFL L DE+ARR+ T R+R+A
Sbjct 5 PDITPLLKKLRLSGMLDSLEVRNKQAISEKMPYTEFLSLLLSDEVARRDQKKFTSRMRKA 64
Query 66 KFEAQATFEDFDFTANPKLPGAMLRDLAALRWLDAGESVILHGPVGVGKTHVAQALVHAV 125
F++ T E+FDF NPK+ L DLA +++ V++ GP G GK+H+AQAL H
Sbjct 65 GFKSSKTLEEFDFDFNPKIDRNQLYDLATCQFIHEKACVLMTGPCGTGKSHIAQALGHYA 124
Query 126 ARRGGDVRFAKTSRMLSDLAGGHADRSWGQRIREYTKPLVLILDDFAMREHTAMHADDLY 185
RRG DVRF +++LS L G A +++ ++ + + +L++DDF ++ H +DL+
Sbjct 125 IRRGFDVRFITQTKLLSTLHGARATQTYAKKFKALAQVPLLVIDDFGLKPVRPPHDEDLH 184
Query 186 ELISDRAITGKPLILTSNRAPNNWYGLFPNPVVAESLLDRLINTSHQILMDGPSYRPRK 244
EL++ R I+TSN W F N ++ + +DRL + +H + +DGPSYR K
Sbjct 185 ELVAHR-YEHAATIITSNLDFLEWDRAFENKLLGSATIDRLRHDAHLVYLDGPSYRTPK 242
>gi|239906081|ref|YP_002952820.1| putative transposase orfB [Desulfovibrio magneticus RS-1]
gi|239795945|dbj|BAH74934.1| putative transposase orfB [Desulfovibrio magneticus RS-1]
Length=258
Score = 170 bits (431), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 87/236 (37%), Positives = 141/236 (60%), Gaps = 1/236 (0%)
Query 6 PALRNALRTLKLSGMLDTLDARLAQTRNGDLGHLEFLQALREDEIARRESAALTRRLRRA 65
PAL AL+ L+LSG+LD+++ R Q L H+EFL L +DE+ARRE + R+RRA
Sbjct 5 PALEPALKQLRLSGILDSMEIRNKQAIENGLSHVEFLAMLIQDEVARREQKKFSLRVRRA 64
Query 66 KFEAQATFEDFDFTANPKLPGAMLRDLAALRWLDAGESVILHGPVGVGKTHVAQALVHAV 125
F ++ T E FDF+ NP + A++ DLA R+L+ V++ GP G GK+H AQAL HA
Sbjct 65 GFRSEKTLESFDFSYNPSVNKALILDLATCRFLEEKAPVLIVGPCGTGKSHTAQALGHAA 124
Query 126 ARRGGDVRFAKTSRMLSDLAGGHADRSWGQRIREYTKPLVLILDDFAMREHTAMHADDLY 185
AR G +V F ++L L A ++ +++ K +LI+DDF ++ + +D +
Sbjct 125 ARNGYEVLFTPIGKLLGMLQAAKATNTYDRKLSTLAKTDLLIIDDFGLKPFKSSENEDFH 184
Query 186 ELISDRAITGKPLILTSNRAPNNWYGLFPNPVVAESLLDRLINTSHQILMDGPSYR 241
+LI++R ++TSN W F N ++ + LDR+ + +++++++G SYR
Sbjct 185 DLIAER-YERCATVITSNLDFAEWGEAFNNKLLGAATLDRIRHGAYKVILEGRSYR 239
>gi|283853954|ref|ZP_06371155.1| IstB domain protein ATP-binding protein [Desulfovibrio sp. FW1012B]
gi|283570657|gb|EFC18716.1| IstB domain protein ATP-binding protein [Desulfovibrio sp. FW1012B]
Length=258
Score = 169 bits (429), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 87/236 (37%), Positives = 141/236 (60%), Gaps = 1/236 (0%)
Query 6 PALRNALRTLKLSGMLDTLDARLAQTRNGDLGHLEFLQALREDEIARRESAALTRRLRRA 65
PAL AL+ L+LSG+LD+++ R Q L H+EFL L +DE+ARRE + R+RRA
Sbjct 5 PALEPALKQLRLSGILDSMEVRNKQAIEDGLSHVEFLAMLIQDEVARREQKKFSLRVRRA 64
Query 66 KFEAQATFEDFDFTANPKLPGAMLRDLAALRWLDAGESVILHGPVGVGKTHVAQALVHAV 125
F ++ T E FDF+ NP + A++ DLA R+L+ V++ GP G GK+H AQAL HA
Sbjct 65 GFRSEKTLESFDFSYNPSVNKALILDLATCRFLEEKAPVLIVGPCGTGKSHTAQALGHAA 124
Query 126 ARRGGDVRFAKTSRMLSDLAGGHADRSWGQRIREYTKPLVLILDDFAMREHTAMHADDLY 185
AR G +V F ++L L A ++ +++ K +LI+DDF ++ + +D +
Sbjct 125 ARNGYEVLFTPIGKLLGMLQAAKATNTYDRKLSTLAKTDLLIIDDFGLKPFKSSEDEDFH 184
Query 186 ELISDRAITGKPLILTSNRAPNNWYGLFPNPVVAESLLDRLINTSHQILMDGPSYR 241
+LI++R ++TSN W F N ++ + LDR+ + +++++++G SYR
Sbjct 185 DLIAER-YERCATVITSNLDFAEWGEAFNNKLLGAATLDRIRHGAYKVILEGRSYR 239
>gi|297568316|ref|YP_003689660.1| IstB domain protein ATP-binding protein [Desulfurivibrio alkaliphilus
AHT2]
gi|297569703|ref|YP_003691047.1| IstB domain protein ATP-binding protein [Desulfurivibrio alkaliphilus
AHT2]
gi|297569970|ref|YP_003691314.1| IstB domain protein ATP-binding protein [Desulfurivibrio alkaliphilus
AHT2]
7 more sequence titles
Length=261
Score = 169 bits (428), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 87/236 (37%), Positives = 139/236 (59%), Gaps = 1/236 (0%)
Query 6 PALRNALRTLKLSGMLDTLDARLAQTRNGDLGHLEFLQALREDEIARRESAALTRRLRRA 65
P L L+ L+LSG+LD+L+AR Q L + +FL L +DE+ARR R+RRA
Sbjct 5 PELIPMLKQLRLSGILDSLEARNRQAIEEKLAYTDFLAMLVQDEVARRSQRKFAMRVRRA 64
Query 66 KFEAQATFEDFDFTANPKLPGAMLRDLAALRWLDAGESVILHGPVGVGKTHVAQALVHAV 125
F T E+FDF+ NP + A++ DLA R+L+ G ++++ GP G GK+H+AQA+ H
Sbjct 65 NFRNHKTLEEFDFSFNPNINRALIMDLATCRFLEEGANLLVVGPCGTGKSHIAQAIGHCA 124
Query 126 ARRGGDVRFAKTSRMLSDLAGGHADRSWGQRIREYTKPLVLILDDFAMREHTAMHADDLY 185
R G DV F ++ML L A ++ +R+ K +LI+DDF ++ +D++
Sbjct 125 VRMGYDVLFTTQTKMLGQLHAARATNAYERRLNALAKVDLLIIDDFGLKPLRTPQDEDIH 184
Query 186 ELISDRAITGKPLILTSNRAPNNWYGLFPNPVVAESLLDRLINTSHQILMDGPSYR 241
+LI +R + I+TSN N W FPN ++ + +DR+ + ++ +L+DG S+R
Sbjct 185 DLIGER-YERRSTIITSNLDLNEWGDAFPNKLLGSATIDRIRHGAYSLLLDGKSFR 239
>gi|297568976|ref|YP_003690320.1| ATPase AAA [Desulfurivibrio alkaliphilus AHT2]
gi|297570010|ref|YP_003691354.1| IstB domain protein ATP-binding protein [Desulfurivibrio alkaliphilus
AHT2]
gi|296924891|gb|ADH85701.1| IstB domain protein ATP-binding protein [Desulfurivibrio alkaliphilus
AHT2]
gi|296925925|gb|ADH86735.1| IstB domain protein ATP-binding protein [Desulfurivibrio alkaliphilus
AHT2]
Length=261
Score = 168 bits (426), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 86/236 (37%), Positives = 139/236 (59%), Gaps = 1/236 (0%)
Query 6 PALRNALRTLKLSGMLDTLDARLAQTRNGDLGHLEFLQALREDEIARRESAALTRRLRRA 65
P L L+ L+LSG+LD+L+AR Q L + +FL L +DE+ARR R+RRA
Sbjct 5 PELIPMLKQLRLSGILDSLEARNRQAIEEKLAYTDFLAMLVQDEVARRSQRKFAMRVRRA 64
Query 66 KFEAQATFEDFDFTANPKLPGAMLRDLAALRWLDAGESVILHGPVGVGKTHVAQALVHAV 125
F T E+FDF+ NP + A++ DLA R+L+ G ++++ GP G GK+H+AQA+ H
Sbjct 65 NFRNHKTLEEFDFSFNPNINRALIMDLATCRFLEEGANLLVVGPCGTGKSHIAQAIGHCA 124
Query 126 ARRGGDVRFAKTSRMLSDLAGGHADRSWGQRIREYTKPLVLILDDFAMREHTAMHADDLY 185
R G DV F ++ML L A ++ +R+ K +LI+DDF ++ +D++
Sbjct 125 VRMGYDVLFTTQTKMLGQLHAARATNAYERRLNALAKVDLLIIDDFGLKPLRTPQDEDIH 184
Query 186 ELISDRAITGKPLILTSNRAPNNWYGLFPNPVVAESLLDRLINTSHQILMDGPSYR 241
+L+ +R + I+TSN N W FPN ++ + +DR+ + ++ +L+DG S+R
Sbjct 185 DLVGER-YERRSTIITSNLDLNEWGDAFPNKLLGSATIDRIRHGAYSLLLDGKSFR 239
>gi|187921088|ref|YP_001890120.1| IstB domain-containing protein ATP-binding protein [Burkholderia
phytofirmans PsJN]
gi|187923188|ref|YP_001894830.1| IstB domain-containing protein ATP-binding protein [Burkholderia
phytofirmans PsJN]
gi|187925828|ref|YP_001897470.1| IstB domain-containing protein ATP-binding protein [Burkholderia
phytofirmans PsJN]
gi|187714382|gb|ACD15606.1| IstB domain protein ATP-binding protein [Burkholderia phytofirmans
PsJN]
gi|187717022|gb|ACD18246.1| IstB domain protein ATP-binding protein [Burkholderia phytofirmans
PsJN]
gi|187719526|gb|ACD20749.1| IstB domain protein ATP-binding protein [Burkholderia phytofirmans
PsJN]
Length=262
Score = 168 bits (425), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 99/248 (40%), Positives = 146/248 (59%), Gaps = 3/248 (1%)
Query 6 PALRNALRTLKLSGMLDTLDARLAQTRNGDLGHLEFLQALREDEIARRESAALTRRLRRA 65
P L ++L+ L+LSG+LDTL+AR + + L + +FL L +DEIARR+ L R+RRA
Sbjct 5 PELTSSLKQLRLSGILDTLEARNREAIDRKLAYTDFLTLLIQDEIARRDHRKLDARMRRA 64
Query 66 KFEAQATFEDFDFTANPKLPGAMLRDLAALRWLDAGESVILHGPVGVGKTHVAQALVHAV 125
F Q T E FDF P L A++ DLA R++D SV++ GP G GK+H+AQAL HA
Sbjct 65 NFRGQKTLEGFDFDRLPNLNRAVVHDLATCRFIDEKVSVLIAGPCGTGKSHLAQALGHAA 124
Query 126 ARRGGDVRFAKTSRMLSDLAGGHADRSWGQRIREYTKPLVLILDDFAMREHTAMHADDLY 185
AR+G DV F +R+L L A S+ +R + K +LI+DDF ++ +D +
Sbjct 125 ARQGHDVLFMTQTRLLGALRNAQAVGSYERRFQALAKVPLLIIDDFGLKPMRTPEDEDFH 184
Query 186 ELISDRAITGKPLILTSNRAPNNWYGLFP-NPVVAESLLDRLINTSHQILMDGPSYR-PR 243
+LI++R +LTSN W F N ++ + LDRL + ++++++DG SYR PR
Sbjct 185 DLIAER-YERTSTVLTSNLDFTEWGDAFATNKMLGAATLDRLRHAAYRVVLDGESYRVPR 243
Query 244 KRPGRTTS 251
P S
Sbjct 244 PMPESNKS 251
>gi|186473710|ref|YP_001861052.1| IstB ATP binding domain-containing protein [Burkholderia phymatum
STM815]
gi|184196042|gb|ACC74006.1| IstB domain protein ATP-binding protein [Burkholderia phymatum
STM815]
Length=262
Score = 167 bits (423), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 99/246 (41%), Positives = 149/246 (61%), Gaps = 9/246 (3%)
Query 6 PALRNALRTLKLSGMLDTLDARLAQTRNGDLGHLEFLQALREDEIARRESAALTRRLRRA 65
P L L+ L+LSG+LD+L+ R Q +G L + EFL L DE+ARRE L RL RA
Sbjct 5 PELNTILKQLRLSGILDSLEQRNRQAIDGQLAYTEFLAMLLHDEVARREQKKLGVRLARA 64
Query 66 KFEAQATFEDFDFTANPKLPGAMLRDLAALRWLDAGESVILHGPVGVGKTHVAQALVHAV 125
F T E+FDF PKL A + DLAA R++D V++ G GVGK+H+AQAL H+
Sbjct 65 GFSLGKTLENFDFDRVPKLNRAHIHDLAAGRYIDEKVCVLMVGQTGVGKSHLAQALGHSA 124
Query 126 ARRGGDVRFAKTSRMLSDLAGGHADRSWGQRIREYTKPLVLILDDFAMREHTAMHADDLY 185
AR+G DV F + +L L A + ++++++ + VLI+DDFA++ A H +D +
Sbjct 125 ARQGRDVLFITQTELLKKLHAARATELYERKLQQFVRVPVLIVDDFALKPLRAPHDEDFH 184
Query 186 ELIS---DRAITGKPLILTSNRAPNNWYGLFP-NPVVAESLLDRLINTSHQILMDGPSYR 241
+LI+ +RA T ILTSN + W FP N ++ + LDRL + +++++++G S+R
Sbjct 185 DLIAARYERAAT----ILTSNLDFSEWGDAFPDNRILGAATLDRLRHGAYRVVIEGESFR 240
Query 242 -PRKRP 246
P+ P
Sbjct 241 KPKPMP 246
>gi|296163780|ref|ZP_06846479.1| IstB domain protein ATP-binding protein [Burkholderia sp. Ch1-1]
gi|295885974|gb|EFG65893.1| IstB domain protein ATP-binding protein [Burkholderia sp. Ch1-1]
Length=262
Score = 167 bits (423), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 99/248 (40%), Positives = 145/248 (59%), Gaps = 3/248 (1%)
Query 6 PALRNALRTLKLSGMLDTLDARLAQTRNGDLGHLEFLQALREDEIARRESAALTRRLRRA 65
P L +L+ L+LSG+LDTL+AR + + L + +FL L +DEIARR+ L R+RRA
Sbjct 5 PELTYSLKQLRLSGILDTLEARNREAIDRKLAYTDFLTLLIQDEIARRDHRKLDARMRRA 64
Query 66 KFEAQATFEDFDFTANPKLPGAMLRDLAALRWLDAGESVILHGPVGVGKTHVAQALVHAV 125
F Q T E FDF P L A++ DLA R++D SV++ GP G GK+H+AQAL HA
Sbjct 65 NFRGQKTLEGFDFDRLPNLNRAVVHDLATCRFIDEKVSVLIAGPCGTGKSHLAQALGHAA 124
Query 126 ARRGGDVRFAKTSRMLSDLAGGHADRSWGQRIREYTKPLVLILDDFAMREHTAMHADDLY 185
AR+G DV F +R+L L A S+ +R + K +LI+DDF ++ +D +
Sbjct 125 ARQGHDVLFMTQTRLLGALRNAQAVGSYERRFQALAKVPLLIIDDFGLKPMRTPEDEDFH 184
Query 186 ELISDRAITGKPLILTSNRAPNNWYGLFP-NPVVAESLLDRLINTSHQILMDGPSYR-PR 243
+LI++R +LTSN W F N ++ + LDRL + ++++++DG SYR PR
Sbjct 185 DLIAER-YERTSTVLTSNLDFTEWGDAFATNKMLGAATLDRLRHAAYRVVLDGESYRVPR 243
Query 244 KRPGRTTS 251
P S
Sbjct 244 PMPESNKS 251
>gi|91784013|ref|YP_559219.1| putative transposase-related ATP-binding protein [Burkholderia
xenovorans LB400]
gi|91687967|gb|ABE31167.1| Putative transposase-related ATP-binding protein [Burkholderia
xenovorans LB400]
Length=262
Score = 167 bits (423), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 100/246 (41%), Positives = 148/246 (61%), Gaps = 3/246 (1%)
Query 6 PALRNALRTLKLSGMLDTLDARLAQTRNGDLGHLEFLQALREDEIARRESAALTRRLRRA 65
P L L+ L+LSG+LD+L+AR + + L EFL L DE+ARR++ L+ R+RRA
Sbjct 5 PELTPLLKQLRLSGILDSLEARNREAIDRKLAFTEFLSLLIHDEVARRDNKKLSLRMRRA 64
Query 66 KFEAQATFEDFDFTANPKLPGAMLRDLAALRWLDAGESVILHGPVGVGKTHVAQALVHAV 125
F +Q T E FDF P L A + DLA R++D +V++ GP G GK+H+AQAL HA
Sbjct 65 NFRSQKTLEGFDFDRLPSLNRAAIHDLATCRFIDEKVAVLIAGPCGTGKSHLAQALGHAA 124
Query 126 ARRGGDVRFAKTSRMLSDLAGGHADRSWGQRIREYTKPLVLILDDFAMREHTAMHADDLY 185
AR+G DV F+ S++L+ L A ++ +R + K +LI+DDF ++ + +D +
Sbjct 125 ARQGHDVLFSTQSQLLASLRSAAAVGTYDRRFQYLAKLPLLIIDDFGLKPLRSPDDEDFH 184
Query 186 ELISDRAITGKPLILTSNRAPNNWYGLFP-NPVVAESLLDRLINTSHQILMDGPSYRPRK 244
+LI++R ILTSN W FP N ++ + LDRL + +H+I++DG SYR K
Sbjct 185 DLIAER-YERAATILTSNLDFPEWGEAFPGNKMIGAATLDRLRHGAHKIVLDGESYRGLK 243
Query 245 RPGRTT 250
PG T
Sbjct 244 -PGVET 248
>gi|156519338|gb|ABU68844.1| IstB [Thauera butanivorans]
Length=262
Score = 166 bits (419), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 96/239 (41%), Positives = 144/239 (61%), Gaps = 3/239 (1%)
Query 12 LRTLKLSGMLDTLDARLAQTRNGDLGHLEFLQALREDEIARRESAALTRRLRRAKFEAQA 71
L+ L+LSG+LD+LDAR Q + L + EFL L +DEIARRE RLRRA F A
Sbjct 11 LKQLRLSGILDSLDARNRQAIDAKLAYTEFLALLIQDEIARREQKKFGTRLRRAAFRASK 70
Query 72 TFEDFDFTANPKLPGAMLRDLAALRWLDAGESVILHGPVGVGKTHVAQALVHAVARRGGD 131
T E F+F P A++ DLA R++D V++ GP G GK+H+AQAL H R+G D
Sbjct 71 TLEGFEFDRLPSTNRALVHDLATGRYIDERAPVLIVGPCGTGKSHLAQALGHCAVRQGHD 130
Query 132 VRFAKTSRMLSDLAGGHADRSWGQRIREYTKPLVLILDDFAMREHTAMHADDLYELISDR 191
V FA +++L+ L A ++ +++++ + VLI+DDF ++ A +DL++LI++R
Sbjct 131 VIFASCAQLLASLNAARAVGTYERKLQQLARVPVLIIDDFGLKPLRAPADEDLHDLIAER 190
Query 192 AITGKPLILTSNRAPNNWYGLFP-NPVVAESLLDRLINTSHQILMDGPSYR-PRKRPGR 248
I+TSN W FP N ++A + +DRL + ++ + +DG SYR PR+ P R
Sbjct 191 -YERTATIVTSNLDFTEWDQAFPGNRLLASATVDRLRHNAYCLTLDGASYRAPRQGPNR 248
>gi|134293018|ref|YP_001116754.1| IstB ATP binding domain-containing protein [Burkholderia vietnamiensis
G4]
gi|134136175|gb|ABO57289.1| IstB domain protein ATP-binding protein [Burkholderia vietnamiensis
G4]
Length=262
Score = 164 bits (416), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 98/246 (40%), Positives = 147/246 (60%), Gaps = 9/246 (3%)
Query 6 PALRNALRTLKLSGMLDTLDARLAQTRNGDLGHLEFLQALREDEIARRESAALTRRLRRA 65
P L L+ L+LSG+LD+L+ R Q +G L + EFL L DE+ARRE L RL RA
Sbjct 5 PELNTILKQLRLSGILDSLEQRNRQAIDGQLAYTEFLATLLHDEVARREQKKLGVRLARA 64
Query 66 KFEAQATFEDFDFTANPKLPGAMLRDLAALRWLDAGESVILHGPVGVGKTHVAQALVHAV 125
F T E+FDF PKL A + DLA R++D SV++ G GVGK+H+AQAL H
Sbjct 65 GFSLGKTLENFDFDRVPKLNRAHIHDLATGRYIDEKVSVLMVGQTGVGKSHLAQALGHCA 124
Query 126 ARRGGDVRFAKTSRMLSDLAGGHADRSWGQRIREYTKPLVLILDDFAMREHTAMHADDLY 185
AR+G DV F + +L L A + ++++++ + VLI+DDFA++ A H +D +
Sbjct 125 ARQGRDVLFVTQTELLKKLHAARATELYERKLQQFVRVPVLIVDDFALKPLRAPHDEDFH 184
Query 186 ELIS---DRAITGKPLILTSNRAPNNWYGLFP-NPVVAESLLDRLINTSHQILMDGPSYR 241
+LI+ +RA T ILTSN + W F N ++ + LDRL + +++++++G S+R
Sbjct 185 DLIAARYERAAT----ILTSNLDFSEWGDAFSDNRILGAATLDRLRHGAYRVVIEGESFR 240
Query 242 -PRKRP 246
P+ P
Sbjct 241 KPKPMP 246
>gi|338530181|ref|YP_004663515.1| IS21 family transposition helper protein truncated [Myxococcus
fulvus HW-1]
gi|338533102|ref|YP_004666436.1| IS21 family transposition helper protein truncated [Myxococcus
fulvus HW-1]
gi|338534016|ref|YP_004667350.1| IS21 family transposition helper protein truncated [Myxococcus
fulvus HW-1]
gi|338536918|ref|YP_004670252.1| IS21 family transposition helper protein truncated [Myxococcus
fulvus HW-1]
gi|337256277|gb|AEI62437.1| IS21 family transposition helper protein truncated [Myxococcus
fulvus HW-1]
gi|337259198|gb|AEI65358.1| IS21 family transposition helper protein truncated [Myxococcus
fulvus HW-1]
gi|337260112|gb|AEI66272.1| IS21 family transposition helper protein truncated [Myxococcus
fulvus HW-1]
gi|337263014|gb|AEI69174.1| IS21 family transposition helper protein truncated [Myxococcus
fulvus HW-1]
Length=260
Score = 164 bits (415), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 91/230 (40%), Positives = 134/230 (59%), Gaps = 1/230 (0%)
Query 12 LRTLKLSGMLDTLDARLAQTRNGDLGHLEFLQALREDEIARRESAALTRRLRRAKFEAQA 71
L+ L+LSG+L +L+ R + + +L EFL L DE+ RR+ L RLRRA FE +
Sbjct 11 LKKLRLSGLLQSLEVRCREAADANLSLTEFLYRLLADEVERRDGKQLDVRLRRAAFERPS 70
Query 72 TFEDFDFTANPKLPGAMLRDLAALRWLDAGESVILHGPVGVGKTHVAQALVHAVARRGGD 131
T EDFDF+ N +P A + +L +++ E+V++ GP GVGK+H+AQAL R G
Sbjct 71 TLEDFDFSFNTSVPRAKVLELGTCTFVERHENVLVVGPAGVGKSHLAQALGQRACRAGHA 130
Query 132 VRFAKTSRMLSDLAGGHADRSWGQRIREYTKPLVLILDDFAMREHTAMHADDLYELISDR 191
V + ML+ L AD S+ +R+ +T P +LI+DD +R T DLYE+I R
Sbjct 131 VLYVSAHDMLTQLRASRADNSYERRLLRFTTPALLIIDDLGLRPLTGEEGVDLYEIIRRR 190
Query 192 AITGKPLILTSNRAPNNWYGLFPNPVVAESLLDRLINTSHQILMDGPSYR 241
I TSNRA W LF + ++A + +DRL++ SH + ++G SYR
Sbjct 191 YERAATCI-TSNRALEEWPPLFGDALLASAAMDRLLHHSHVLTIEGDSYR 239
>gi|167567998|ref|ZP_02360914.1| transposition helper protein [Burkholderia oklahomensis EO147]
Length=258
Score = 162 bits (411), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 96/243 (40%), Positives = 143/243 (59%), Gaps = 3/243 (1%)
Query 6 PALRNALRTLKLSGMLDTLDARLAQTRNGDLGHLEFLQALREDEIARRESAALTRRLRRA 65
PAL L+ L+LSG+LD+L+AR Q + L +++FL L EDE+ARRE R+RRA
Sbjct 7 PALTPHLKQLRLSGILDSLEARNRQAIDAKLSYVDFLALLIEDEVARREQKKFALRMRRA 66
Query 66 KFEAQATFEDFDFTANPKLPGAMLRDLAALRWLDAGESVILHGPVGVGKTHVAQALVHAV 125
F T E FDF P+L A++ DLA R+L V++ GP G GK+H+AQAL H
Sbjct 67 AFRTSKTLEQFDFDRLPQLNRALVHDLAGGRYLGEHAPVLIVGPCGTGKSHLAQALGHCA 126
Query 126 ARRGGDVRFAKTSRMLSDLAGGHADRSWGQRIREYTKPLVLILDDFAMREHTAMHADDLY 185
R+G DV F +++ + L A ++ +R+ + +LI+DDF ++ +DL+
Sbjct 127 VRQGVDVLFTTCTQLTTSLNAARATGAYERRLASLMRVELLIIDDFGLKPLRPPADEDLH 186
Query 186 ELISDRAITGKPLILTSNRAPNNWYGLFP-NPVVAESLLDRLINTSHQILMDGPSYR-PR 243
ELI++R T I+TSN W FP N ++A + LDRL + ++ +++DG SYR PR
Sbjct 187 ELIAERYETAST-IVTSNLDLIEWDQAFPANRLLASATLDRLRHNAYCLVLDGHSYRSPR 245
Query 244 KRP 246
P
Sbjct 246 HLP 248
>gi|317124006|ref|YP_004098118.1| IstB domain protein ATP-binding protein [Intrasporangium calvum
DSM 43043]
gi|317124272|ref|YP_004098384.1| IstB domain protein ATP-binding protein [Intrasporangium calvum
DSM 43043]
gi|315588094|gb|ADU47391.1| IstB domain protein ATP-binding protein [Intrasporangium calvum
DSM 43043]
gi|315588360|gb|ADU47657.1| IstB domain protein ATP-binding protein [Intrasporangium calvum
DSM 43043]
Length=278
Score = 162 bits (410), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 94/245 (39%), Positives = 137/245 (56%), Gaps = 4/245 (1%)
Query 4 CDPA---LRNALRTLKLSGMLDTLDARLAQTRNGDLGHLEFLQALREDEIARRESAALTR 60
DP L + LR LKLSG+ DTL RLA R LGH FLQ L DE+ARRES +
Sbjct 22 IDPVGTDLSSILRALKLSGLKDTLPERLALARQQKLGHAAFLQLLLSDEVARRESRSAML 81
Query 61 RLRRAKFEAQATFEDFDFTANPKLPGAMLRDLAALRWLDAGESVILHGPVGVGKTHVAQA 120
R +A + + +D + + DL +LR+ +AG V++ GPVG GKTH+A A
Sbjct 82 RAAKAGLDPSMRIQTWDEHPDLNYDRTLWSDLTSLRFTEAGTGVLILGPVGAGKTHLATA 141
Query 121 LVHAVARRGGDVRFAKTSRMLSDLAGGHADRSWGQRIREYTKPLVLILDDFAMREHTAMH 180
L HA RR V FA+ ++ + L D + +R +LI+DDFA+R A
Sbjct 142 LGHAAIRRRMSVVFARADKLFTRLRAARLDHTLEAEVRRLAAVDLLIVDDFALRALDATQ 201
Query 181 ADDLYELISDRAITGKPLILTSNRAPNNWYGLFPNPVVAESLLDRLINTSHQILMDGPSY 240
+D YEL+ +R K I SNR P+ W + + ++A+S +DRL + +H ++++GPS+
Sbjct 202 TNDFYELVVERH-RKKSTIWVSNREPSEWLAMTTDALLAQSAIDRLTSGAHHLIIEGPSH 260
Query 241 RPRKR 245
R R+R
Sbjct 261 RQRQR 265
>gi|56475551|ref|YP_157140.1| transposition helper protein [Aromatoleum aromaticum EbN1]
gi|56477567|ref|YP_159156.1| transposition helper protein [Aromatoleum aromaticum EbN1]
gi|56311594|emb|CAI06239.1| transposition helper protein [Aromatoleum aromaticum EbN1]
gi|56313610|emb|CAI08255.1| transposition helper protein [Aromatoleum aromaticum EbN1]
Length=262
Score = 160 bits (406), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 90/246 (37%), Positives = 144/246 (59%), Gaps = 3/246 (1%)
Query 6 PALRNALRTLKLSGMLDTLDARLAQTRNGDLGHLEFLQALREDEIARRESAALTRRLRRA 65
P L L+ L+LSG+LD+LD R Q G L + EFL L DE+ARR+ + RLRRA
Sbjct 5 PELTAFLKQLRLSGILDSLDLRNRQAIEGKLAYTEFLSILIGDEVARRDQKKVAMRLRRA 64
Query 66 KFEAQATFEDFDFTANPKLPGAMLRDLAALRWLDAGESVILHGPVGVGKTHVAQALVHAV 125
F + T E FDF P L ++++DLA R+L ++++ GP G GK+H+AQAL H
Sbjct 65 NFRGEKTIEAFDFDRLPNLNRSLIQDLATGRYLSEKVAILIAGPCGTGKSHLAQALGHCA 124
Query 126 ARRGGDVRFAKTSRMLSDLAGGHADRSWGQRIREYTKPLVLILDDFAMREHTAMHADDLY 185
R+G DV F ++++ L A S+ +R ++ + +L++DDF ++ H +D +
Sbjct 125 VRQGHDVVFTTQTQLVGSLHAARAIGSFERRFQQLARVPLLVIDDFGLKPLRPPHDEDFH 184
Query 186 ELISDRAITGKPLILTSNRAPNNWYGLFP-NPVVAESLLDRLINTSHQILMDGPSYR-PR 243
+L+++R I+TSN + W FP N ++ + LDRL + ++++++DG SYR P+
Sbjct 185 DLVAERYERAST-IVTSNLDYDEWGDAFPANRMLGAATLDRLRHGAYRVVLDGESYRAPK 243
Query 244 KRPGRT 249
P T
Sbjct 244 PSPDST 249
>gi|56476944|ref|YP_158533.1| transposition helper protein [Aromatoleum aromaticum EbN1]
gi|56478577|ref|YP_160166.1| transposition helper protein [Aromatoleum aromaticum EbN1]
gi|56312987|emb|CAI07632.1| transposition helper protein [Aromatoleum aromaticum EbN1]
gi|56314620|emb|CAI09265.1| transposition helper protein [Aromatoleum aromaticum EbN1]
Length=262
Score = 160 bits (406), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 90/246 (37%), Positives = 144/246 (59%), Gaps = 3/246 (1%)
Query 6 PALRNALRTLKLSGMLDTLDARLAQTRNGDLGHLEFLQALREDEIARRESAALTRRLRRA 65
P L L+ L+LSG+LD+LD R Q G L + EFL L DE+ARR+ + RLRRA
Sbjct 5 PELTAFLKQLRLSGILDSLDLRNRQAIEGKLAYTEFLSILIGDEVARRDQKKVAMRLRRA 64
Query 66 KFEAQATFEDFDFTANPKLPGAMLRDLAALRWLDAGESVILHGPVGVGKTHVAQALVHAV 125
F + T E FDF P L ++++DLA R+L ++++ GP G GK+H+AQAL H
Sbjct 65 NFRGEKTIEAFDFDRLPNLNRSLIQDLATGRYLSEKVAILIAGPCGTGKSHLAQALGHCA 124
Query 126 ARRGGDVRFAKTSRMLSDLAGGHADRSWGQRIREYTKPLVLILDDFAMREHTAMHADDLY 185
R+G DV F ++++ L A S+ +R ++ + +L++DDF ++ H +D +
Sbjct 125 VRQGHDVVFTMQTQLVGSLHAARAIGSFERRFQQLARVPLLVIDDFGLKPLRPPHDEDFH 184
Query 186 ELISDRAITGKPLILTSNRAPNNWYGLFP-NPVVAESLLDRLINTSHQILMDGPSYR-PR 243
+L+++R I+TSN + W FP N ++ + LDRL + ++++++DG SYR P+
Sbjct 185 DLVAERYERAST-IVTSNLDYDEWGDAFPANRMLGAATLDRLRHGAYRVVLDGESYRAPK 243
Query 244 KRPGRT 249
P T
Sbjct 244 PSPDST 249
>gi|187921170|ref|YP_001890202.1| IstB domain-containing protein ATP-binding protein [Burkholderia
phytofirmans PsJN]
gi|187922212|ref|YP_001893854.1| IstB domain-containing protein ATP-binding protein [Burkholderia
phytofirmans PsJN]
gi|187713406|gb|ACD14630.1| IstB domain protein ATP-binding protein [Burkholderia phytofirmans
PsJN]
gi|187719608|gb|ACD20831.1| IstB domain protein ATP-binding protein [Burkholderia phytofirmans
PsJN]
Length=262
Score = 160 bits (404), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 94/243 (39%), Positives = 144/243 (60%), Gaps = 3/243 (1%)
Query 6 PALRNALRTLKLSGMLDTLDARLAQTRNGDLGHLEFLQALREDEIARRESAALTRRLRRA 65
P L L+ L+LSG+LD+L+ R Q +G L + EFL L DE+ARR+ L RL RA
Sbjct 5 PELNTTLKQLRLSGVLDSLEQRNRQAIDGQLAYTEFLAMLLHDEVARRDQKKLRTRLARA 64
Query 66 KFEAQATFEDFDFTANPKLPGAMLRDLAALRWLDAGESVILHGPVGVGKTHVAQALVHAV 125
F T E FDF P L + DLA R++D ++++ GP G GK+H+AQAL +
Sbjct 65 GFAMGKTLETFDFDRLPNLNRTHIHDLATGRYIDEKVAILIAGPTGTGKSHLAQALGNCA 124
Query 126 ARRGGDVRFAKTSRMLSDLAGGHADRSWGQRIREYTKPLVLILDDFAMREHTAMHADDLY 185
AR+G DV FA +R+L+ L A ++ +++++ VLI+DDFA++ + +D +
Sbjct 125 ARQGRDVVFATQTRLLNSLQAARATGTYERKLKQLASVPVLIVDDFALKPLRSPQDEDFH 184
Query 186 ELISDRAITGKPLILTSNRAPNNWYGLFP-NPVVAESLLDRLINTSHQILMDGPSYR-PR 243
+LI++R T ILTSN + W F N ++ + LDRL + +++I++DG S+R PR
Sbjct 185 DLIAERYETAAT-ILTSNLDFSEWGDAFAGNRILGAATLDRLRHGAYRIVLDGDSFRTPR 243
Query 244 KRP 246
P
Sbjct 244 PLP 246
>gi|291286209|ref|YP_003503025.1| IstB domain-containing protein ATP-binding protein [Denitrovibrio
acetiphilus DSM 12809]
gi|291286601|ref|YP_003503417.1| IstB domain-containing protein ATP-binding protein [Denitrovibrio
acetiphilus DSM 12809]
gi|291286636|ref|YP_003503452.1| IstB domain-containing protein ATP-binding protein [Denitrovibrio
acetiphilus DSM 12809]
11 more sequence titles
Length=248
Score = 158 bits (400), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 80/237 (34%), Positives = 139/237 (59%), Gaps = 1/237 (0%)
Query 8 LRNALRTLKLSGMLDTLDARLAQTRNGDLGHLEFLQALREDEIARRESAALTRRLRRAKF 67
L+ ++ L+LSG+L TL R+A + L + EFL+ + +DE+ RR + ++++A
Sbjct 7 LKQTVKKLRLSGILATLPERMAYAKQQHLTYAEFLELVMQDEVDRRLHNQVDNQMKKAGI 66
Query 68 EAQATFEDFDFTANPKLPGAMLRDLAALRWLDAGESVILHGPVGVGKTHVAQALVHAVAR 127
T E +DF A ++ M++ L L +++ ++V+L GPVGVGKT++A AL HA R
Sbjct 67 NPFETLERYDFDAPVQVDREMIKGLFGLNFIEEKDNVMLCGPVGVGKTYLANALAHAAVR 126
Query 128 RGGDVRFAKTSRMLSDLAGGHADRSWGQRIREYTKPLVLILDDFAMREHTAMHADDLYEL 187
RG V + ++ L AD S+ + + + P +LI+DDF ++ + D YE+
Sbjct 127 RGKKVLMVRAEKLFKRLQQSRADYSYEKALLGFITPDMLIIDDFGLKALNEQQSTDFYEI 186
Query 188 ISDRAITGKPLILTSNRAPNNWYGLFPNPVVAESLLDRLINTSHQILMDGPSYRPRK 244
+ +R +I TSNR + W LF +P++A S LDRL++ +++++++G SYR K
Sbjct 187 VVERYGRASTVI-TSNRDTDEWLELFHDPILANSALDRLVHNAYRVVIEGESYRKIK 242
>gi|257091568|ref|YP_003165211.1| hypothetical protein CAP2UW1_4634 [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
gi|257048577|gb|ACV37764.1| hypothetical protein CAP2UW1_4634 [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
Length=262
Score = 157 bits (397), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 88/247 (36%), Positives = 143/247 (58%), Gaps = 2/247 (0%)
Query 6 PALRNALRTLKLSGMLDTLDARLAQTRNGDLGHLEFLQALREDEIARRESAALTRRLRRA 65
P L L+ L+LSG+LD+LDAR Q L + +FL L +DEIARR+ +RLR+A
Sbjct 5 PQLEPLLKQLRLSGILDSLDARNRQAIEAKLAYTDFLALLVQDEIARRDQRQFAQRLRKA 64
Query 66 KFEAQATFEDFDFTANPKLPGAMLRDLAALRWLDAGESVILHGPVGVGKTHVAQALVHAV 125
+ T E FD+T +P + A++ +LA R++ SV++ GP G GK+H+ Q+L H
Sbjct 65 QVIGDKTLERFDYTHSPSVNHALIAELATCRFVTEHSSVLIAGPTGTGKSHLVQSLCHCA 124
Query 126 ARRGGDVRFAKTSRMLSDLAGGHADRSWGQRIREYTKPLVLILDDFAMREHTAMHADDLY 185
R G +V F +++L+ L A ++ +++R+ + VL +DDF +R + +D +
Sbjct 125 LRAGHEVLFISHTKLLAQLQAARATDTFERKLRQLARIDVLAIDDFGLRPMRSPQDEDFH 184
Query 186 ELISDRAITGKPLILTSNRAPNNWYGLFPNPVVAESLLDRLINTSHQILMDGPSYR-PRK 244
+LI R L LTSN + W FPN ++ + LDRL + +++I++DG + R PR
Sbjct 185 DLIDARYERTTSL-LTSNLHFDEWGAAFPNKLMGAATLDRLRDGAYRIVLDGETRRKPRP 243
Query 245 RPGRTTS 251
P T++
Sbjct 244 MPESTSA 250
>gi|161521277|ref|YP_001584704.1| IstB ATP binding domain-containing protein [Burkholderia multivorans
ATCC 17616]
gi|161522684|ref|YP_001585613.1| IstB ATP binding domain-containing protein [Burkholderia multivorans
ATCC 17616]
gi|161525681|ref|YP_001580693.1| IstB ATP binding domain-containing protein [Burkholderia multivorans
ATCC 17616]
10 more sequence titles
Length=262
Score = 157 bits (397), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 92/243 (38%), Positives = 141/243 (59%), Gaps = 3/243 (1%)
Query 6 PALRNALRTLKLSGMLDTLDARLAQTRNGDLGHLEFLQALREDEIARRESAALTRRLRRA 65
P L + L+ L+LSG+LD+L+ R Q +G L + EFL L DE+ARRE L RL RA
Sbjct 5 PELNSILKQLRLSGILDSLEQRNRQAIDGQLAYTEFLAMLLHDEVARREHKKLGTRLLRA 64
Query 66 KFEAQATFEDFDFTANPKLPGAMLRDLAALRWLDAGESVILHGPVGVGKTHVAQALVHAV 125
F T E FDF P L + + DLA R+LD ++++ GP G GK+H+AQAL H
Sbjct 65 GFAMGKTLETFDFDRLPTLNRSHVHDLATGRYLDEKVAILIAGPTGTGKSHLAQALGHCA 124
Query 126 ARRGGDVRFAKTSRMLSDLAGGHADRSWGQRIREYTKPLVLILDDFAMREHTAMHADDLY 185
AR+G DV F + +L L A ++ ++ ++Y + +LI+DDFA++ +D +
Sbjct 125 ARQGRDVLFISQTELLKRLNAARATGAYDRKFQQYARVPLLIVDDFALKPLRTPQDEDFH 184
Query 186 ELISDRAITGKPLILTSNRAPNNWYGLFP-NPVVAESLLDRLINTSHQILMDGPSYR-PR 243
+L++ R ILTSN W FP N ++ + LDRL + +++++++G SYR P+
Sbjct 185 DLVAAR-YEHAATILTSNLDFGEWGAAFPDNRILGTATLDRLRHGAYRLVLEGDSYRTPK 243
Query 244 KRP 246
P
Sbjct 244 PMP 246
>gi|340780948|ref|YP_004747555.1| IstB domain-containing protein ATP-binding protein [Acidithiobacillus
caldus SM-1]
gi|340781807|ref|YP_004748414.1| IstB domain-containing protein ATP-binding protein [Acidithiobacillus
caldus SM-1]
gi|340781883|ref|YP_004748490.1| IstB domain-containing protein ATP-binding protein [Acidithiobacillus
caldus SM-1]
13 more sequence titles
Length=261
Score = 153 bits (387), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 90/241 (38%), Positives = 142/241 (59%), Gaps = 3/241 (1%)
Query 8 LRNALRTLKLSGMLDTLDARLAQTRNGDLGHLEFLQALREDEIARRESAALTRRLRRAKF 67
L+++LR L+LSG+L++L+AR Q +G L + EFL L +DEIARR+ LR+A+F
Sbjct 6 LQSSLRALRLSGILESLEARNRQAIDGQLAYTEFLALLLQDEIARRDQKRFDTLLRQAQF 65
Query 68 EAQATFEDFDFTANPKLPGAMLRDLAALRWLDAGESVILHGPVGVGKTHVAQALVHAVAR 127
T EDF F P L +++ DLA R+L V++ GP G GK+H+AQAL H R
Sbjct 66 RNHKTLEDFAFDRLPSLNRSLVHDLATGRYLREKAPVLIVGPCGTGKSHLAQALGHCAIR 125
Query 128 RGGDVRFAKTSRMLSDLAGGHADRSWGQRIREYTKPLVLILDDFAMREHTAMHADDLYEL 187
+G DVRF S + L A ++ + R+ K +LI+DDF ++ H +D+++L
Sbjct 126 QGVDVRFMSQSALAGALHAARATGTYDRVFRQLAKVSLLIIDDFGLKPLRPPHDEDIHDL 185
Query 188 ISDRAITGKPLILTSNRAPNNWYGLFP-NPVVAESLLDRLINTSHQILMDGPSYR-PRKR 245
I R ++ TSN + W +FP N ++ + +DRL + +++++++G SYR PR
Sbjct 186 IGARYEQATTMV-TSNLDFSEWGDVFPANRMLGVATIDRLRHGAYRLILEGESYRAPRPL 244
Query 246 P 246
P
Sbjct 245 P 245
>gi|222528180|ref|YP_002572062.1| IstB domain-containing protein ATP-binding protein [Caldicellulosiruptor
bescii DSM 6725]
gi|222455027|gb|ACM59289.1| IstB domain protein ATP-binding protein [Caldicellulosiruptor
bescii DSM 6725]
Length=252
Score = 152 bits (385), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 73/233 (32%), Positives = 129/233 (56%), Gaps = 1/233 (0%)
Query 15 LKLSGMLDTLDARLAQTRNGDLGHLEFLQALREDEIARRESAALTRRLRRAKFEAQATFE 74
+KLSG++ + D R+ + + + EF + L DE++ R + +R+ +A+F T E
Sbjct 1 MKLSGIIKSFDLRVEEAIKNNFSYQEFFEILINDEVSNRRINSNQKRISKARFPWHKTLE 60
Query 75 DFDFTANPKLPGAMLRDLAALRWLDAGESVILHGPVGVGKTHVAQALVHAVARRGGDVRF 134
+++F+ P + + +LA ++ E+V GP G GKTH+A A+ G V F
Sbjct 61 EYNFSYQPSINKRFIYNLATCEFVRKKENVAFIGPPGTGKTHLAIAIGLKAVALGYRVLF 120
Query 135 AKTSRMLSDLAGGHADRSWGQRIREYTKPLVLILDDFAMREHTAMHADDLYELISDRAIT 194
+ ML +L AD S+ Q+++ Y +LI+D+ +R+ DD YE+IS R
Sbjct 121 TTANEMLEELYISRADNSYQQKLKNYVNVDLLIIDELGLRKFNQSSVDDFYEIISKRYER 180
Query 195 GKPLILTSNRAPNNWYGLFPNPVVAESLLDRLINTSHQILMDGPSYRPRKRPG 247
G +I+T+N+ W +F +PV+A ++LDR ++ H +++ G SYR ++R G
Sbjct 181 G-SIIITTNKVFEEWPTIFYDPVLATAILDRFVHHCHFVVIKGESYRMKQREG 232
>gi|344200423|ref|YP_004784749.1| IstB domain-containing protein ATP-binding protein [Acidithiobacillus
ferrivorans SS3]
gi|343775867|gb|AEM48423.1| IstB domain protein ATP-binding protein [Acidithiobacillus ferrivorans
SS3]
Length=261
Score = 151 bits (382), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 90/241 (38%), Positives = 138/241 (58%), Gaps = 3/241 (1%)
Query 8 LRNALRTLKLSGMLDTLDARLAQTRNGDLGHLEFLQALREDEIARRESAALTRRLRRAKF 67
L + LR L+LSG+LD+L+AR Q +G L + EFL L +DE+ARR+ LR+A F
Sbjct 6 LSSNLRALRLSGILDSLEARNRQAVDGQLAYTEFLAMLLQDEVARRDQRKFDTLLRQAHF 65
Query 68 EAQATFEDFDFTANPKLPGAMLRDLAALRWLDAGESVILHGPVGVGKTHVAQALVHAVAR 127
T EDF F P L +++ DLA R+L V++ GP G GK+H+AQAL H R
Sbjct 66 RNHKTLEDFAFDRLPNLNRSLVHDLATGRYLQEQAPVLIVGPCGTGKSHLAQALGHCAIR 125
Query 128 RGGDVRFAKTSRMLSDLAGGHADRSWGQRIREYTKPLVLILDDFAMREHTAMHADDLYEL 187
+G DV F ++ L A + +R R+ K +LI+DDF ++ H +D ++L
Sbjct 126 QGVDVLFITQGDLVGSLHAARATGGFDRRFRQLAKVTLLIIDDFGLKPMRPPHDEDFHDL 185
Query 188 ISDRAITGKPLILTSNRAPNNWYGLFP-NPVVAESLLDRLINTSHQILMDGPSYR-PRKR 245
I++R +LTSN W +FP N ++ + LDRL + +++++++G S+R PR
Sbjct 186 IAER-YERVSTMLTSNLDFAEWGDVFPANRMLGVATLDRLRHGAYRLILEGDSFRAPRPL 244
Query 246 P 246
P
Sbjct 245 P 245
>gi|257093057|ref|YP_003166698.1| IstB domain-containing protein ATP-binding protein [Candidatus
Accumulibacter phosphatis clade IIA str. UW-1]
gi|257045581|gb|ACV34769.1| IstB domain protein ATP-binding protein [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
Length=267
Score = 150 bits (378), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 86/239 (36%), Positives = 139/239 (59%), Gaps = 8/239 (3%)
Query 12 LRTLKLSGMLDTLDARLAQTRNGDLGHLEFLQALREDEIARRESAALTRRLRRAKFEAQA 71
L L+LSG+LD+L+AR Q L + +FL L EDE+ARR+ +RLR+A+
Sbjct 11 LMQLRLSGILDSLEARNRQAIEAKLAYTDFLALLVEDEVARRDQRQFAQRLRKAQVVGDK 70
Query 72 TFEDFDFTANPKLPGAMLRDLAALRWLDAGESVILHGPVGVGKTHVAQALVHAVARRGGD 131
T E FD + +P + A++ +LA R++ V++ GP G GK+H+ Q+L H R G +
Sbjct 71 TLERFDCSHSPSVNHALIAELATCRFVLEQAPVLIAGPTGTGKSHLVQSLCHCALRAGHE 130
Query 132 VRFAKTSRMLSDLAGGHADRSWGQRIREYTKPLVLILDDFAMREHTAMHADDLYELIS-- 189
V F +++L+ L A S+ +++R+ + VL +DDFA+R + +D ++LI
Sbjct 131 VLFISHAKLLAQLHAARATDSFERKLRQLARVDVLAIDDFALRPMRSPQDEDFHDLIDAR 190
Query 190 -DRAITGKPLILTSNRAPNNWYGLFPNPVVAESLLDRLINTSHQILMDGPSYR-PRKRP 246
+RA T +LTSN + W FPN ++ + LDRL + ++QI++DG + R PR P
Sbjct 191 YERATT----LLTSNLHFDEWGAAFPNKLMGAATLDRLRDRAYQIILDGETRRKPRPLP 245
>gi|257091746|ref|YP_003165387.1| IstB domain-containing protein ATP-binding protein [Candidatus
Accumulibacter phosphatis clade IIA str. UW-1]
gi|257091996|ref|YP_003165637.1| IstB domain-containing protein ATP-binding protein [Candidatus
Accumulibacter phosphatis clade IIA str. UW-1]
gi|257094419|ref|YP_003168060.1| IstB domain-containing protein ATP-binding protein [Candidatus
Accumulibacter phosphatis clade IIA str. UW-1]
gi|257095303|ref|YP_003168944.1| IstB domain-containing protein ATP-binding protein [Candidatus
Accumulibacter phosphatis clade IIA str. UW-1]
gi|257044270|gb|ACV33458.1| IstB domain protein ATP-binding protein [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
gi|257044520|gb|ACV33708.1| IstB domain protein ATP-binding protein [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
gi|257046943|gb|ACV36131.1| IstB domain protein ATP-binding protein [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
gi|257047827|gb|ACV37015.1| IstB domain protein ATP-binding protein [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
Length=267
Score = 149 bits (375), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 83/236 (36%), Positives = 136/236 (58%), Gaps = 2/236 (0%)
Query 12 LRTLKLSGMLDTLDARLAQTRNGDLGHLEFLQALREDEIARRESAALTRRLRRAKFEAQA 71
L+ L+LSG+LD+L+AR Q L + +FL L EDE+ARR+ +RLR+A+
Sbjct 11 LKQLRLSGILDSLEARNRQAIEAKLAYTDFLALLVEDEVARRDQRQFAQRLRKAQVVGDK 70
Query 72 TFEDFDFTANPKLPGAMLRDLAALRWLDAGESVILHGPVGVGKTHVAQALVHAVARRGGD 131
T E FD + +P + A++ +LA R++ V++ GP G GK+H+ Q+L H R G +
Sbjct 71 TLERFDCSHSPSVNHALIAELATCRFVLEQAPVLIAGPTGTGKSHLVQSLCHCALRAGHE 130
Query 132 VRFAKTSRMLSDLAGGHADRSWGQRIREYTKPLVLILDDFAMREHTAMHADDLYELISDR 191
V F +++L+ L A S+ +++R+ + VL +DDF +R + +D ++LI R
Sbjct 131 VLFISHAKLLAQLHAARATDSFERKLRQLARVDVLAIDDFGLRPMRSPQDEDFHDLIDAR 190
Query 192 AITGKPLILTSNRAPNNWYGLFPNPVVAESLLDRLINTSHQILMDGPSYR-PRKRP 246
+LTSN + W FPN ++ + LDRL + ++QI++DG + R PR P
Sbjct 191 -YERTTTLLTSNLHFDEWGAAFPNKLMGAATLDRLRDRAYQIILDGETRRKPRPLP 245
>gi|146295117|ref|YP_001178888.1| IstB ATP binding domain-containing protein [Caldicellulosiruptor
saccharolyticus DSM 8903]
gi|146295877|ref|YP_001179648.1| IstB ATP binding domain-containing protein [Caldicellulosiruptor
saccharolyticus DSM 8903]
gi|146297598|ref|YP_001181369.1| IstB ATP binding domain-containing protein [Caldicellulosiruptor
saccharolyticus DSM 8903]
gi|145408693|gb|ABP65697.1| IstB domain protein ATP-binding protein [Caldicellulosiruptor
saccharolyticus DSM 8903]
gi|145409453|gb|ABP66457.1| IstB domain protein ATP-binding protein [Caldicellulosiruptor
saccharolyticus DSM 8903]
gi|145411174|gb|ABP68178.1| IstB domain protein ATP-binding protein [Caldicellulosiruptor
saccharolyticus DSM 8903]
Length=263
Score = 149 bits (375), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 72/230 (32%), Positives = 125/230 (55%), Gaps = 1/230 (0%)
Query 18 SGMLDTLDARLAQTRNGDLGHLEFLQALREDEIARRESAALTRRLRRAKFEAQATFEDFD 77
SG++ + D R+ + + + EF + L DE++ R + +R+ +AKF T E+++
Sbjct 15 SGIIKSFDLRVEEAIKNNFSYQEFFEILINDEVSNRRINSNQKRISKAKFPWHKTLEEYN 74
Query 78 FTANPKLPGAMLRDLAALRWLDAGESVILHGPVGVGKTHVAQALVHAVARRGGDVRFAKT 137
F P + + +LA ++ E+V GP G GKTH+A A+ G V F
Sbjct 75 FNYQPSINKRFIYNLATCEFVRKRENVAFIGPPGTGKTHLAIAIGLKAVALGYRVLFTTA 134
Query 138 SRMLSDLAGGHADRSWGQRIREYTKPLVLILDDFAMREHTAMHADDLYELISDRAITGKP 197
+ ML +L AD S+ Q+++ Y +LI+D+ +R+ DD YE+IS R G
Sbjct 135 NEMLEELYISRADNSYQQKLKNYVNVDLLIIDELGLRKFNQSSVDDFYEIISKRYERG-S 193
Query 198 LILTSNRAPNNWYGLFPNPVVAESLLDRLINTSHQILMDGPSYRPRKRPG 247
+I+T+N+ W +F +PV+A ++LDR ++ H +++ G SYR ++R G
Sbjct 194 IIITTNKVFEEWARIFYDPVLATAILDRFVHHCHFVVIKGESYRMKQREG 243
>gi|257093316|ref|YP_003166957.1| IstB domain-containing protein ATP-binding protein [Candidatus
Accumulibacter phosphatis clade IIA str. UW-1]
gi|257045840|gb|ACV35028.1| IstB domain protein ATP-binding protein [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
Length=267
Score = 148 bits (374), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 85/239 (36%), Positives = 138/239 (58%), Gaps = 8/239 (3%)
Query 12 LRTLKLSGMLDTLDARLAQTRNGDLGHLEFLQALREDEIARRESAALTRRLRRAKFEAQA 71
L L+LSG+LD+L+AR Q L + +FL L EDE+ARR+ +RLR+A+
Sbjct 11 LMQLRLSGILDSLEARNRQAIEAKLAYTDFLALLVEDEVARRDQRQFAQRLRKAQVVGDK 70
Query 72 TFEDFDFTANPKLPGAMLRDLAALRWLDAGESVILHGPVGVGKTHVAQALVHAVARRGGD 131
T E FD + +P + A++ +LA R++ V++ GP G GK+H+ Q+L H R G +
Sbjct 71 TLERFDCSHSPSVNHALIAELATCRFVLEQAPVLIAGPTGTGKSHLVQSLCHCALRAGHE 130
Query 132 VRFAKTSRMLSDLAGGHADRSWGQRIREYTKPLVLILDDFAMREHTAMHADDLYELIS-- 189
V F +++L+ L A S+ +++R+ + VL +DDF +R + +D ++LI
Sbjct 131 VLFISHAKLLAQLHAARATDSFERKLRQLARVDVLAIDDFGLRPMRSPQDEDFHDLIDAR 190
Query 190 -DRAITGKPLILTSNRAPNNWYGLFPNPVVAESLLDRLINTSHQILMDGPSYR-PRKRP 246
+RA T +LTSN + W FPN ++ + LDRL + ++QI++DG + R PR P
Sbjct 191 YERATT----LLTSNLHFDEWGAAFPNKLMGAATLDRLRDRAYQIILDGETRRKPRPLP 245
>gi|146295135|ref|YP_001178906.1| IstB ATP binding domain-containing protein [Caldicellulosiruptor
saccharolyticus DSM 8903]
gi|146295388|ref|YP_001179159.1| IstB ATP binding domain-containing protein [Caldicellulosiruptor
saccharolyticus DSM 8903]
gi|146297108|ref|YP_001180879.1| IstB ATP binding domain-containing protein [Caldicellulosiruptor
saccharolyticus DSM 8903]
gi|145408711|gb|ABP65715.1| IstB domain protein ATP-binding protein [Caldicellulosiruptor
saccharolyticus DSM 8903]
gi|145408964|gb|ABP65968.1| IstB domain protein ATP-binding protein [Caldicellulosiruptor
saccharolyticus DSM 8903]
gi|145410684|gb|ABP67688.1| IstB domain protein ATP-binding protein [Caldicellulosiruptor
saccharolyticus DSM 8903]
Length=263
Score = 148 bits (373), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 72/230 (32%), Positives = 125/230 (55%), Gaps = 1/230 (0%)
Query 18 SGMLDTLDARLAQTRNGDLGHLEFLQALREDEIARRESAALTRRLRRAKFEAQATFEDFD 77
SG++ + D R+ + + + EF + L DE++ R + +R+ +AKF T E+++
Sbjct 15 SGIIKSFDLRVEEAIKNNFSYQEFFEILINDEVSNRRINSNQKRISKAKFPWHKTLEEYN 74
Query 78 FTANPKLPGAMLRDLAALRWLDAGESVILHGPVGVGKTHVAQALVHAVARRGGDVRFAKT 137
F P + + +LA ++ E+V GP G GKTH+A A+ G V F
Sbjct 75 FNYQPSINKRFIYNLATCEFVRKRENVAFIGPPGTGKTHLAIAIGLKAVALGYRVLFTTA 134
Query 138 SRMLSDLAGGHADRSWGQRIREYTKPLVLILDDFAMREHTAMHADDLYELISDRAITGKP 197
+ ML +L AD S+ Q+++ Y +LI+D+ +R+ DD YE+IS R G
Sbjct 135 NEMLEELYISRADNSYQQKLKNYVNVDLLIIDELGLRKFNQSSVDDFYEIISKRYERG-S 193
Query 198 LILTSNRAPNNWYGLFPNPVVAESLLDRLINTSHQILMDGPSYRPRKRPG 247
+I+T+N+ W +F +PV+A ++LDR ++ H +++ G SYR ++R G
Sbjct 194 IIITTNKVFEEWPRIFYDPVLATAILDRFVHHCHFVVIKGESYRMKQREG 243
>gi|257093652|ref|YP_003167293.1| IstB domain-containing protein ATP-binding protein [Candidatus
Accumulibacter phosphatis clade IIA str. UW-1]
gi|257046176|gb|ACV35364.1| IstB domain protein ATP-binding protein [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
Length=267
Score = 147 bits (372), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 83/236 (36%), Positives = 135/236 (58%), Gaps = 2/236 (0%)
Query 12 LRTLKLSGMLDTLDARLAQTRNGDLGHLEFLQALREDEIARRESAALTRRLRRAKFEAQA 71
L L+LSG+LD+L+AR Q L + +FL L EDE+ARR+ +RLR+A+
Sbjct 11 LMQLRLSGILDSLEARNRQAIEAKLAYTDFLALLVEDEVARRDQRQFAQRLRKAQVVGDK 70
Query 72 TFEDFDFTANPKLPGAMLRDLAALRWLDAGESVILHGPVGVGKTHVAQALVHAVARRGGD 131
T E FD + +P + A++ +LA R++ V++ GP G GK+H+ Q+L H R G +
Sbjct 71 TLERFDCSHSPSVNHALIAELATCRFVLEQAPVLIAGPTGTGKSHLVQSLCHCALRAGHE 130
Query 132 VRFAKTSRMLSDLAGGHADRSWGQRIREYTKPLVLILDDFAMREHTAMHADDLYELISDR 191
V F +++L+ L A S+ +++R+ + VL +DDF +R + +D ++LI R
Sbjct 131 VLFISHAKLLAQLHAARATDSFERKLRQLARVDVLAIDDFGLRPMRSPQDEDFHDLIDAR 190
Query 192 AITGKPLILTSNRAPNNWYGLFPNPVVAESLLDRLINTSHQILMDGPSYR-PRKRP 246
+LTSN + W FPN ++ + LDRL + ++QI++DG + R PR P
Sbjct 191 -YERTTTLLTSNLHFDEWGAAFPNKLMGAATLDRLRDRAYQIILDGETRRKPRPLP 245
>gi|344995591|ref|YP_004797934.1| IstB domain-containing protein ATP-binding protein [Caldicellulosiruptor
lactoaceticus 6A]
gi|344996899|ref|YP_004799242.1| IstB domain-containing protein ATP-binding protein [Caldicellulosiruptor
lactoaceticus 6A]
gi|343963810|gb|AEM72957.1| IstB domain protein ATP-binding protein [Caldicellulosiruptor
lactoaceticus 6A]
gi|343965118|gb|AEM74265.1| IstB domain protein ATP-binding protein [Caldicellulosiruptor
lactoaceticus 6A]
Length=263
Score = 147 bits (372), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 71/230 (31%), Positives = 126/230 (55%), Gaps = 1/230 (0%)
Query 18 SGMLDTLDARLAQTRNGDLGHLEFLQALREDEIARRESAALTRRLRRAKFEAQATFEDFD 77
SG++ + D R+ + + + EF + L DE++ R + +R+ +A+F T E+++
Sbjct 15 SGIIKSFDLRVEEAIKNNFSYQEFFEILINDEVSNRRINSNQKRISKARFPWHKTLEEYN 74
Query 78 FTANPKLPGAMLRDLAALRWLDAGESVILHGPVGVGKTHVAQALVHAVARRGGDVRFAKT 137
F+ P + + +LA ++ E+V GP G GKTH+A A+ G V F
Sbjct 75 FSYQPSINKRFIYNLATCEFVRKKENVAFIGPPGTGKTHLAIAIGLKAVALGYRVLFTTA 134
Query 138 SRMLSDLAGGHADRSWGQRIREYTKPLVLILDDFAMREHTAMHADDLYELISDRAITGKP 197
+ ML +L AD S+ Q+++ Y +LI+D+ +R+ DD YE+IS R G
Sbjct 135 NEMLEELYISRADNSYQQKLKNYVNVDLLIIDELGLRKFNQSSVDDFYEIISKRYERG-S 193
Query 198 LILTSNRAPNNWYGLFPNPVVAESLLDRLINTSHQILMDGPSYRPRKRPG 247
+I+T+N+ W +F +PV+A ++LDR ++ H +++ G SYR ++R G
Sbjct 194 IIITTNKVFEEWPRIFYDPVLATAILDRFVHHCHFVVIKGESYRMKQREG 243
>gi|222529829|ref|YP_002573711.1| IstB domain-containing protein ATP-binding protein [Caldicellulosiruptor
bescii DSM 6725]
gi|222456676|gb|ACM60938.1| IstB domain protein ATP-binding protein [Caldicellulosiruptor
bescii DSM 6725]
Length=263
Score = 147 bits (372), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 71/230 (31%), Positives = 126/230 (55%), Gaps = 1/230 (0%)
Query 18 SGMLDTLDARLAQTRNGDLGHLEFLQALREDEIARRESAALTRRLRRAKFEAQATFEDFD 77
SG++ + D R+ + + + EF + L DE++ R + +R+ +A+F T E+++
Sbjct 15 SGVIKSFDLRVEEAIKNNFSYQEFFEILINDEVSNRRINSNQKRISKARFPWHKTLEEYN 74
Query 78 FTANPKLPGAMLRDLAALRWLDAGESVILHGPVGVGKTHVAQALVHAVARRGGDVRFAKT 137
F+ P + + +LA ++ E+V GP G GKTH+A A+ G V F
Sbjct 75 FSYQPSINKRFIYNLATCEFVRKKENVAFIGPPGTGKTHLAIAIGLKAVALGYRVLFTTA 134
Query 138 SRMLSDLAGGHADRSWGQRIREYTKPLVLILDDFAMREHTAMHADDLYELISDRAITGKP 197
+ ML +L AD S+ Q+++ Y +LI+D+ +R+ DD YE+IS R G
Sbjct 135 NEMLEELYISRADNSYQQKLKNYVNVDLLIIDELGLRKFNQSSVDDFYEIISKRYERG-S 193
Query 198 LILTSNRAPNNWYGLFPNPVVAESLLDRLINTSHQILMDGPSYRPRKRPG 247
+I+T+N+ W +F +PV+A ++LDR ++ H +++ G SYR ++R G
Sbjct 194 IIITTNKVFEEWPRIFYDPVLATAILDRFVHHCHFVVIKGESYRMKQREG 243
>gi|312114022|ref|YP_004011618.1| IstB domain-containing protein ATP-binding protein [Rhodomicrobium
vannielii ATCC 17100]
gi|311219151|gb|ADP70519.1| IstB domain protein ATP-binding protein [Rhodomicrobium vannielii
ATCC 17100]
Length=265
Score = 145 bits (366), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 89/245 (37%), Positives = 133/245 (55%), Gaps = 1/245 (0%)
Query 1 MSICDPALRNALRTLKLSGMLDTLDARLAQTRNGDLGHLEFLQALREDEIARRESAALTR 60
MS CD L + L LKL G+ D LD+ L + DL + L L E EIAR+++ +
Sbjct 1 MSSCDDRLLDMLGKLKLFGIRDRLDSLLDEASRSDLDMRQTLTLLLEREIARKDARRIEM 60
Query 61 RLRRAKFEAQATFEDFDFTANPKLPGAMLRDLAALRWLDAGESVILHGPVGVGKTHVAQA 120
L+ A F FDF A P + +RDLAA RW+ GE+V+L GP GVGKTH+A A
Sbjct 61 ALKLAHFPMVRDLTGFDFAAQPSVDARQVRDLAAGRWIANGENVLLLGPPGVGKTHLAIA 120
Query 121 LVHAVARRGGDVRFAKTSRMLSDLAGGHADRSWGQRIREYTKPLVLILDDFAMREHTAMH 180
L G F + +++ LA H + R+ + KP +LI+D+
Sbjct 121 LGREAILAGYAALFMPATALVAQLARAHVEGRLEDRLMHFAKPKLLIVDELGYLPFEPSA 180
Query 181 ADDLYELISDRAITGKPLILTSNRAPNNWYGLFPNPVVAESLLDRLINTSHQILMDGPSY 240
A ++L+S R G +++TSNR+ W +F +PVVA ++LDR+++ SH I + G SY
Sbjct 181 AHLFFQLVSRRYEKGA-MLMTSNRSVGEWDAVFGDPVVATAILDRMLHHSHVITIRGDSY 239
Query 241 RPRKR 245
R +++
Sbjct 240 RLKEK 244
>gi|148240883|ref|YP_001220384.1| putative insertion sequence IS21-like; putative ATP-binding protein
[Bradyrhizobium sp. BTAi1]
gi|148240953|ref|YP_001220454.1| putative insertion sequence IS21-like; putative ATP-binding protein
[Bradyrhizobium sp. BTAi1]
gi|146411259|gb|ABQ39712.1| Putative Insertion sequence IS21-like; putative ATP-binding protein
[Bradyrhizobium sp. BTAi1]
gi|146411329|gb|ABQ39782.1| Putative Insertion sequence IS21-like; putative ATP-binding protein
[Bradyrhizobium sp. BTAi1]
Length=286
Score = 144 bits (363), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 92/242 (39%), Positives = 134/242 (56%), Gaps = 2/242 (0%)
Query 4 CDPALRNALRTLKLSGMLDTLDARLAQTRNGDLGHLEFLQALREDEIARRESAALTRRLR 63
DP L L L+LSG+ D LD+ L + +L E L L E EIAR++ + L+
Sbjct 12 TDP-LDAMLARLQLSGIRDQLDSLLDEAARANLSARETLILLCEREIARKDHRRIDMALK 70
Query 64 RAKFEAQATFEDFDFTANPKLPGAMLRDLAALRWLDAGESVILHGPVGVGKTHVAQALVH 123
A F A FDF A P + +RDLAA RW+ GE+V+L GP GVGKTH++ AL
Sbjct 71 LAHFPAVKELAGFDFEAQPSIDPKQIRDLAASRWIANGENVLLLGPPGVGKTHLSIALGR 130
Query 124 AVARRGGDVRFAKTSRMLSDLAGGHADRSWGQRIREYTKPLVLILDDFAMREHTAMHADD 183
G V+F + +++ LA H +R +++ +KP +LI+D+ A
Sbjct 131 EAILAGYTVQFTTATTLVAGLAKAHGERRLDEKLLALSKPKLLIVDELGYLPLEPDAAHL 190
Query 184 LYELISDRAITGKPLILTSNRAPNNWYGLFPNPVVAESLLDRLINTSHQILMDGPSYRPR 243
++L+S R TG LI TSNR+ W +F +PVVA ++LDRL++ SH + + G SYR R
Sbjct 191 FFQLVSRRYETGAMLI-TSNRSVAEWGTVFADPVVATAILDRLLHHSHVLTIRGDSYRLR 249
Query 244 KR 245
+
Sbjct 250 AK 251
>gi|332662477|ref|YP_004445265.1| IstB domain-containing protein ATP-binding protein [Haliscomenobacter
hydrossis DSM 1100]
gi|332664223|ref|YP_004447011.1| IstB domain-containing protein ATP-binding protein [Haliscomenobacter
hydrossis DSM 1100]
gi|332331291|gb|AEE48392.1| IstB domain protein ATP-binding protein [Haliscomenobacter hydrossis
DSM 1100]
gi|332333037|gb|AEE50138.1| IstB domain protein ATP-binding protein [Haliscomenobacter hydrossis
DSM 1100]
Length=248
Score = 143 bits (360), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 78/236 (34%), Positives = 129/236 (55%), Gaps = 1/236 (0%)
Query 8 LRNALRTLKLSGMLDTLDARLAQTRNGDLGHLEFLQALREDEIARRESAALTRRLRRAKF 67
L N L+ L++S +L +L + L +LEF + L EDE A+R++ L +RL ++K
Sbjct 4 LENKLKYLRMSAVLQSLKNHNDTAQEQQLSYLEFFEMLIEDECAKRKANVLRQRLAKSKL 63
Query 68 EAQATFEDFDFTANPKLPGAMLRDLAALRWLDAGESVILHGPVGVGKTHVAQALVHAVAR 127
Q +FE +D P+L ML ++ + R++D +++IL G G GKTH+A A+ A
Sbjct 64 NTQKSFEHYDLNFQPELDKKMLSEIRSCRFIDEHKNIILIGKPGTGKTHLANAIGLEAAA 123
Query 128 RGGDVRFAKTSRMLSDLAGGHADRSWGQRIREYTKPLVLILDDFAMREHTAMHADDLYEL 187
RG V F +L LA G D S + +++ P +LILD+ R DD +E+
Sbjct 124 RGYSVLFTHLHTLLEKLAQGRIDSSHRRTLQQILAPDLLILDEIGFRSLAPQALDDFFEI 183
Query 188 ISDRAITGKPLILTSNRAPNNWYGLFPNPVVAESLLDRLINTSHQILMDGPSYRPR 243
I R K I TSNR +W + + V+A +++DR+++ +H + +G S+R +
Sbjct 184 IRHR-YEHKSTIFTSNRNFEDWGAILGDKVMASAIIDRIVHHAHILKFNGDSFRIK 238
>gi|312115167|ref|YP_004012763.1| IstB domain-containing protein ATP-binding protein [Rhodomicrobium
vannielii ATCC 17100]
gi|311220296|gb|ADP71664.1| IstB domain protein ATP-binding protein [Rhodomicrobium vannielii
ATCC 17100]
Length=265
Score = 143 bits (360), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 91/245 (38%), Positives = 130/245 (54%), Gaps = 1/245 (0%)
Query 1 MSICDPALRNALRTLKLSGMLDTLDARLAQTRNGDLGHLEFLQALREDEIARRESAALTR 60
MS CD L + L LKL G+ D LD+ L + DL + L L E EIAR+++ +
Sbjct 1 MSSCDDRLLDMLGKLKLFGVRDRLDSLLDEASRSDLDMRQTLTLLLEREIARKDARRIEM 60
Query 61 RLRRAKFEAQATFEDFDFTANPKLPGAMLRDLAALRWLDAGESVILHGPVGVGKTHVAQA 120
L+ A F FDF A P + +RDLAA RW+ E+V+L GP GVGKTH+A A
Sbjct 61 ALKLAHFPMVRDLTGFDFAAQPSVDARQVRDLAAGRWIANSENVLLLGPPGVGKTHLAIA 120
Query 121 LVHAVARRGGDVRFAKTSRMLSDLAGGHADRSWGQRIREYTKPLVLILDDFAMREHTAMH 180
L G F + ++ LA H + R+ + KP +LI+D+
Sbjct 121 LGREAILAGYAALFMPATALVVQLARAHVEGRLEDRLMHFAKPKLLIVDELGYLPFEPSA 180
Query 181 ADDLYELISDRAITGKPLILTSNRAPNNWYGLFPNPVVAESLLDRLINTSHQILMDGPSY 240
A ++L+S R G LI TSNR+ W +F +PVVA ++LDRL++ SH I + G SY
Sbjct 181 AHLFFQLVSRRYEKGAMLI-TSNRSVGEWDAVFGDPVVATAILDRLLHHSHVITIRGDSY 239
Query 241 RPRKR 245
R +++
Sbjct 240 RLKEK 244
>gi|327399401|ref|YP_004340270.1| IstB domain-containing protein ATP-binding protein [Hippea maritima
DSM 10411]
gi|327182030|gb|AEA34211.1| IstB domain protein ATP-binding protein [Hippea maritima DSM
10411]
Length=278
Score = 141 bits (355), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 72/232 (32%), Positives = 131/232 (57%), Gaps = 1/232 (0%)
Query 12 LRTLKLSGMLDTLDARLAQTRNGDLGHLEFLQALREDEIARRESAALTRRLRRAKFEAQA 71
L+ KLSG+ TL+AR + +L +++FL+ L EDE R+S + +RL ++K +
Sbjct 17 LKEFKLSGIAKTLEARNRYAIDNNLTYIDFLKLLLEDEYINRQSNSFRKRLTKSKLDTTK 76
Query 72 TFEDFDFTANPKLPGAMLRDLAALRWLDAGESVILHGPVGVGKTHVAQALVHAVARRGGD 131
T + +DFT PKL L D+A+ R+++ +++I G GVGKTH+A A+ ++G
Sbjct 77 TLDSYDFTYQPKLNKKELLDIASCRFIEEKKNIIFMGNPGVGKTHLANAIGLEALKQGYK 136
Query 132 VRFAKTSRMLSDLAGGHADRSWGQRIREYTKPLVLILDDFAMREHTAMHADDLYELISDR 191
V F T+ ++ L D ++ + + +LI+D+ ++ + + D+ +E+I R
Sbjct 137 VLFIHTNDLILKLISARGDGTYTSILNQILSSDLLIIDEVGFKKIPSNYVDEFFEVIRRR 196
Query 192 AITGKPLILTSNRAPNNWYGLFPNPVVAESLLDRLINTSHQILMDGPSYRPR 243
G +I+T+NR W +F + V+A +++DRL++ H + G SYR +
Sbjct 197 YEKG-SIIITTNRPFEEWANIFSDAVLASAIVDRLVHHCHIFKITGESYRIK 247
>gi|327398560|ref|YP_004339429.1| IstB domain-containing protein ATP-binding protein [Hippea maritima
DSM 10411]
gi|327399122|ref|YP_004339991.1| IstB domain-containing protein ATP-binding protein [Hippea maritima
DSM 10411]
gi|327399735|ref|YP_004340604.1| IstB domain-containing protein ATP-binding protein [Hippea maritima
DSM 10411]
7 more sequence titles
Length=260
Score = 140 bits (354), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 72/232 (32%), Positives = 131/232 (57%), Gaps = 1/232 (0%)
Query 12 LRTLKLSGMLDTLDARLAQTRNGDLGHLEFLQALREDEIARRESAALTRRLRRAKFEAQA 71
L+ KLSG+ TL+AR + +L +++FL+ L EDE R+S + +RL ++K +
Sbjct 17 LKEFKLSGIAKTLEARNRYAIDNNLTYIDFLKLLLEDEYINRQSNSFRKRLTKSKLDTTK 76
Query 72 TFEDFDFTANPKLPGAMLRDLAALRWLDAGESVILHGPVGVGKTHVAQALVHAVARRGGD 131
T + +DFT PKL L D+A+ R+++ +++I G GVGKTH+A A+ ++G
Sbjct 77 TLDSYDFTYQPKLNKKELLDIASCRFIEEKKNIIFMGNPGVGKTHLANAIGLEALKQGYK 136
Query 132 VRFAKTSRMLSDLAGGHADRSWGQRIREYTKPLVLILDDFAMREHTAMHADDLYELISDR 191
V F T+ ++ L D ++ + + +LI+D+ ++ + + D+ +E+I R
Sbjct 137 VLFIHTNDLILKLISARGDGTYTSILNQILSSDLLIIDEVGFKKIPSNYVDEFFEVIRRR 196
Query 192 AITGKPLILTSNRAPNNWYGLFPNPVVAESLLDRLINTSHQILMDGPSYRPR 243
G +I+T+NR W +F + V+A +++DRL++ H + G SYR +
Sbjct 197 YEKG-SIIITTNRPFEEWANIFSDAVLASAIVDRLVHHCHIFKITGESYRIK 247
Lambda K H
0.322 0.136 0.403
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 362093846100
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40