BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv3428c Length=410 Score E Sequences producing significant alignments: (Bits) Value gi|15610564|ref|NP_217945.1| transposase [Mycobacterium tubercul... 838 0.0 gi|306973887|ref|ZP_07486548.1| putative integrase core domain p... 837 0.0 gi|308232463|ref|ZP_07664095.1| putative integrase core domain p... 835 0.0 gi|298526909|ref|ZP_07014318.1| transposase [Mycobacterium tuber... 827 0.0 gi|148824633|ref|YP_001289387.1| transposase [Mycobacterium tube... 827 0.0 gi|289449125|ref|ZP_06438869.1| transposase [Mycobacterium tuber... 825 0.0 gi|289444915|ref|ZP_06434659.1| transposase [Mycobacterium tuber... 825 0.0 gi|289759588|ref|ZP_06518966.1| LOW QUALITY PROTEIN: transposase... 824 0.0 gi|326905270|gb|EGE52203.1| transposase [Mycobacterium tuberculo... 823 0.0 gi|339633432|ref|YP_004725074.1| transposase [Mycobacterium afri... 822 0.0 gi|289752147|ref|ZP_06511525.1| LOW QUALITY PROTEIN: transposase... 822 0.0 gi|289755557|ref|ZP_06514935.1| LOW QUALITY PROTEIN: transposase... 819 0.0 gi|289576159|ref|ZP_06456386.1| LOW QUALITY PROTEIN: transposase... 702 0.0 gi|289571654|ref|ZP_06451881.1| transposase [Mycobacterium tuber... 676 0.0 gi|262200379|ref|YP_003271587.1| integrase catalytic domain-cont... 499 4e-139 gi|262200055|ref|YP_003271263.1| integrase catalytic domain-cont... 496 3e-138 gi|331697056|ref|YP_004333295.1| Integrase catalytic region [Pse... 491 6e-137 gi|256393041|ref|YP_003114605.1| integrase catalytic region [Cat... 479 3e-133 gi|331693914|ref|YP_004330153.1| Integrase catalytic region [Pse... 478 1e-132 gi|85859557|ref|YP_461759.1| transposase [Syntrophus aciditrophi... 268 2e-69 gi|258404768|ref|YP_003197510.1| Integrase catalytic region [Des... 267 3e-69 gi|297568317|ref|YP_003689661.1| Integrase catalytic region [Des... 263 6e-68 gi|161318461|gb|ABU68843.2| IstA [Thauera butanivorans] 247 2e-63 gi|239907547|ref|YP_002954288.1| putative transposase orfA for i... 240 3e-61 gi|283853953|ref|ZP_06371154.1| Integrase catalytic region [Desu... 236 7e-60 gi|91784014|ref|YP_559220.1| putative transposase catalytic subu... 235 9e-60 gi|187921171|ref|YP_001890203.1| integrase catalytic subunit [Bu... 234 2e-59 gi|56475550|ref|YP_157139.1| transposase [Aromatoleum aromaticum... 234 2e-59 gi|291286208|ref|YP_003503024.1| integrase catalytic subunit [De... 232 1e-58 gi|257091747|ref|YP_003165388.1| integrase catalytic subunit [Ca... 231 1e-58 gi|187921087|ref|YP_001890119.1| integrase catalytic subunit [Bu... 231 2e-58 gi|257091569|ref|YP_003165212.1| hypothetical protein CAP2UW1_46... 228 1e-57 gi|239906082|ref|YP_002952821.1| putative transposase [Desulfovi... 228 2e-57 gi|340780947|ref|YP_004747554.1| integrase catalytic subunit [Ac... 219 8e-55 gi|167567997|ref|ZP_02360913.1| transposase [Burkholderia oklaho... 216 5e-54 gi|296163781|ref|ZP_06846480.1| Integrase catalytic region [Burk... 216 5e-54 gi|161506571|ref|YP_001573692.1| integrase catalytic region [Bur... 214 2e-53 gi|344200422|ref|YP_004784748.1| integrase catalytic subunit [Ac... 212 8e-53 gi|55847597|dbj|BAD72779.1| transposase [Burkholderia multivoran... 203 4e-50 gi|315441533|ref|YP_004074410.1| transposase [Mycobacterium sp. ... 201 2e-49 gi|33867208|ref|NP_898766.1| putative transposase [Rhodococcus e... 194 2e-47 gi|291525627|emb|CBK91214.1| Transposase and inactivated derivat... 194 3e-47 gi|150389540|ref|YP_001319589.1| integrase catalytic subunit [Al... 193 5e-47 gi|226323126|ref|ZP_03798644.1| hypothetical protein COPCOM_0089... 191 2e-46 gi|338530182|ref|YP_004663516.1| ISBmu1b transposase [Myxococcus... 188 1e-45 gi|338533101|ref|YP_004666435.1| ISBmu1b transposase [Myxococcus... 188 1e-45 gi|197103158|ref|YP_002128536.1| transposase, ISPsy14 [Phenyloba... 188 2e-45 gi|153854110|ref|ZP_01995418.1| hypothetical protein DORLON_0140... 187 4e-45 gi|260177262|gb|ACX33981.1| IstA transposase IS21 family protein... 187 4e-45 gi|332662476|ref|YP_004445264.1| integrase catalytic subunit [Ha... 186 5e-45 >gi|15610564|ref|NP_217945.1| transposase [Mycobacterium tuberculosis H37Rv] gi|148663292|ref|YP_001284815.1| ISMt2 transposase A [Mycobacterium tuberculosis H37Ra] gi|167968683|ref|ZP_02550960.1| ISMt2 transposase A [Mycobacterium tuberculosis H37Ra] 6 more sequence titles Length=410 Score = 838 bits (2166), Expect = 0.0, Method: Compositional matrix adjust. Identities = 409/410 (99%), Positives = 410/410 (100%), Gaps = 0/410 (0%) Query 1 VATIAQRLRDDHGVAASESSVRRWIATHFAEEVARERVTVPRGPVDAGSEAQIDYGRLGM 60 +ATIAQRLRDDHGVAASESSVRRWIATHFAEEVARERVTVPRGPVDAGSEAQIDYGRLGM Sbjct 1 MATIAQRLRDDHGVAASESSVRRWIATHFAEEVARERVTVPRGPVDAGSEAQIDYGRLGM 60 Query 61 WFDPATARRVAVWAFVMVLAFSRHLFVRPVIRMDQTAWCACHVAAFEFFDGVPARLVCDN 120 WFDPATARRVAVWAFVMVLAFSRHLFVRPVIRMDQTAWCACHVAAFEFFDGVPARLVCDN Sbjct 61 WFDPATARRVAVWAFVMVLAFSRHLFVRPVIRMDQTAWCACHVAAFEFFDGVPARLVCDN 120 Query 121 LRTGVDKPDLYDPQINRSYAELASHYATLVDPARARKPKDKPRVERPMTYVRDSFWKGRE 180 LRTGVDKPDLYDPQINRSYAELASHYATLVDPARARKPKDKPRVERPMTYVRDSFWKGRE Sbjct 121 LRTGVDKPDLYDPQINRSYAELASHYATLVDPARARKPKDKPRVERPMTYVRDSFWKGRE 180 Query 181 FDSLAQMQQAAVTWSTEVAGLRYLRALEGAQPLRMFEAVEQQALIALPPRAFELTSWSIG 240 FDSLAQMQQAAVTWSTEVAGLRYLRALEGAQPLRMFEAVEQQALIALPPRAFELTSWSIG Sbjct 181 FDSLAQMQQAAVTWSTEVAGLRYLRALEGAQPLRMFEAVEQQALIALPPRAFELTSWSIG 240 Query 241 TVGVDTHLKVGKALYSVPWRLIGQRLHARTAGDVVQIFAGNDVVATHVRRPSGRSTDFSH 300 TVGVDTHLKVGKALYSVPWRLIGQRLHARTAGDVVQIFAGNDVVATHVRRPSGRSTDFSH Sbjct 241 TVGVDTHLKVGKALYSVPWRLIGQRLHARTAGDVVQIFAGNDVVATHVRRPSGRSTDFSH 300 Query 301 YPPEKIAFHMRTPTWCRHTAELVGPASQQVIAEFMRDNAIHHLRSAQGVLGLRDKHGCDR 360 YPPEKIAFHMRTPTWCRHTAELVGPASQQVIAEFMRDNAIHHLRSAQGVLGLRDKHGCDR Sbjct 301 YPPEKIAFHMRTPTWCRHTAELVGPASQQVIAEFMRDNAIHHLRSAQGVLGLRDKHGCDR 360 Query 361 LEAACARAIEVGDPSYRTIKGILVAGTEHAANEPTTSSPASTAGGVPARP 410 LEAACARAIEVGDPSYRTIKGILVAGTEHAANEPTTSSPASTAGGVPARP Sbjct 361 LEAACARAIEVGDPSYRTIKGILVAGTEHAANEPTTSSPASTAGGVPARP 410 >gi|306973887|ref|ZP_07486548.1| putative integrase core domain protein [Mycobacterium tuberculosis SUMu010] gi|308356771|gb|EFP45622.1| putative integrase core domain protein [Mycobacterium tuberculosis SUMu010] Length=410 Score = 837 bits (2161), Expect = 0.0, Method: Compositional matrix adjust. Identities = 408/410 (99%), Positives = 409/410 (99%), Gaps = 0/410 (0%) Query 1 VATIAQRLRDDHGVAASESSVRRWIATHFAEEVARERVTVPRGPVDAGSEAQIDYGRLGM 60 +ATIAQRLRDDHGVAASESSVRRWIATHFAEEVARERVTVPRGPVDAGSEAQIDYGRLGM Sbjct 1 MATIAQRLRDDHGVAASESSVRRWIATHFAEEVARERVTVPRGPVDAGSEAQIDYGRLGM 60 Query 61 WFDPATARRVAVWAFVMVLAFSRHLFVRPVIRMDQTAWCACHVAAFEFFDGVPARLVCDN 120 WFDPATARRVAVWAFVMVLAFSRHLFVRPVIRMDQTAWCACHVAAFEFFDGVPARLVCDN Sbjct 61 WFDPATARRVAVWAFVMVLAFSRHLFVRPVIRMDQTAWCACHVAAFEFFDGVPARLVCDN 120 Query 121 LRTGVDKPDLYDPQINRSYAELASHYATLVDPARARKPKDKPRVERPMTYVRDSFWKGRE 180 LRTGVDKPDLYDPQINRSYAELASHYATLVDPARARKPKDKPRVERPMTYVRDSFWKGRE Sbjct 121 LRTGVDKPDLYDPQINRSYAELASHYATLVDPARARKPKDKPRVERPMTYVRDSFWKGRE 180 Query 181 FDSLAQMQQAAVTWSTEVAGLRYLRALEGAQPLRMFEAVEQQALIALPPRAFELTSWSIG 240 FDSLAQMQQAAVTWSTEVAGLRYLRALEGAQPLRMFEAVEQQALIALPPRAFELTSWSIG Sbjct 181 FDSLAQMQQAAVTWSTEVAGLRYLRALEGAQPLRMFEAVEQQALIALPPRAFELTSWSIG 240 Query 241 TVGVDTHLKVGKALYSVPWRLIGQRLHARTAGDVVQIFAGNDVVATHVRRPSGRSTDFSH 300 TVGVDTHLKVGKALYSVPWRLIGQRLHARTAGDVVQIFAGNDVVATHVRRPSGRSTDFSH Sbjct 241 TVGVDTHLKVGKALYSVPWRLIGQRLHARTAGDVVQIFAGNDVVATHVRRPSGRSTDFSH 300 Query 301 YPPEKIAFHMRTPTWCRHTAELVGPASQQVIAEFMRDNAIHHLRSAQGVLGLRDKHGCDR 360 YPPEKIAFHMRTPTWCRHTAELVGPA QQVIAEFMRDNAIHHLRSAQGVLGLRDKHGCDR Sbjct 301 YPPEKIAFHMRTPTWCRHTAELVGPACQQVIAEFMRDNAIHHLRSAQGVLGLRDKHGCDR 360 Query 361 LEAACARAIEVGDPSYRTIKGILVAGTEHAANEPTTSSPASTAGGVPARP 410 LEAACARAIEVGDPSYRTIKGILVAGTEHAANEPTTSSPASTAGGVPARP Sbjct 361 LEAACARAIEVGDPSYRTIKGILVAGTEHAANEPTTSSPASTAGGVPARP 410 >gi|308232463|ref|ZP_07664095.1| putative integrase core domain protein [Mycobacterium tuberculosis SUMu001] gi|308380697|ref|ZP_07669259.1| putative integrase core domain protein [Mycobacterium tuberculosis SUMu011] gi|308213902|gb|EFO73301.1| putative integrase core domain protein [Mycobacterium tuberculosis SUMu001] gi|308360721|gb|EFP49572.1| putative integrase core domain protein [Mycobacterium tuberculosis SUMu011] Length=440 Score = 835 bits (2158), Expect = 0.0, Method: Compositional matrix adjust. Identities = 409/410 (99%), Positives = 409/410 (99%), Gaps = 0/410 (0%) Query 1 VATIAQRLRDDHGVAASESSVRRWIATHFAEEVARERVTVPRGPVDAGSEAQIDYGRLGM 60 VATIAQRLRDDHGVAASESSVRRWIATHFAEEVARERVTVPRGPVDAGSEAQIDYGRLGM Sbjct 31 VATIAQRLRDDHGVAASESSVRRWIATHFAEEVARERVTVPRGPVDAGSEAQIDYGRLGM 90 Query 61 WFDPATARRVAVWAFVMVLAFSRHLFVRPVIRMDQTAWCACHVAAFEFFDGVPARLVCDN 120 WFDPATARRVAVWAFVMVLAFSRHLFVRPVIRMDQTAWCACHVAAFEFFDGVPARLVCDN Sbjct 91 WFDPATARRVAVWAFVMVLAFSRHLFVRPVIRMDQTAWCACHVAAFEFFDGVPARLVCDN 150 Query 121 LRTGVDKPDLYDPQINRSYAELASHYATLVDPARARKPKDKPRVERPMTYVRDSFWKGRE 180 LRTGVDKPDLYDPQINRSYAELASHYATLVDPARARKPKDKPRVERPMTYVRDSFWKGRE Sbjct 151 LRTGVDKPDLYDPQINRSYAELASHYATLVDPARARKPKDKPRVERPMTYVRDSFWKGRE 210 Query 181 FDSLAQMQQAAVTWSTEVAGLRYLRALEGAQPLRMFEAVEQQALIALPPRAFELTSWSIG 240 FDSLAQMQQAAVTWSTEVAGLRYLRALEGAQPLRMFEAVEQQALIALPPRAFELTSWSIG Sbjct 211 FDSLAQMQQAAVTWSTEVAGLRYLRALEGAQPLRMFEAVEQQALIALPPRAFELTSWSIG 270 Query 241 TVGVDTHLKVGKALYSVPWRLIGQRLHARTAGDVVQIFAGNDVVATHVRRPSGRSTDFSH 300 TVGVDTHLKVGKALYSVPWRLIGQRLHARTAGDVVQIFAGNDVVATHVRRPSGRSTDFSH Sbjct 271 TVGVDTHLKVGKALYSVPWRLIGQRLHARTAGDVVQIFAGNDVVATHVRRPSGRSTDFSH 330 Query 301 YPPEKIAFHMRTPTWCRHTAELVGPASQQVIAEFMRDNAIHHLRSAQGVLGLRDKHGCDR 360 YPPEKIAFHMRTPTWCRHTAELVGPA QQVIAEFMRDNAIHHLRSAQGVLGLRDKHGCDR Sbjct 331 YPPEKIAFHMRTPTWCRHTAELVGPACQQVIAEFMRDNAIHHLRSAQGVLGLRDKHGCDR 390 Query 361 LEAACARAIEVGDPSYRTIKGILVAGTEHAANEPTTSSPASTAGGVPARP 410 LEAACARAIEVGDPSYRTIKGILVAGTEHAANEPTTSSPASTAGGVPARP Sbjct 391 LEAACARAIEVGDPSYRTIKGILVAGTEHAANEPTTSSPASTAGGVPARP 440 >gi|298526909|ref|ZP_07014318.1| transposase [Mycobacterium tuberculosis 94_M4241A] gi|298496703|gb|EFI31997.1| transposase [Mycobacterium tuberculosis 94_M4241A] Length=694 Score = 827 bits (2137), Expect = 0.0, Method: Compositional matrix adjust. Identities = 402/404 (99%), Positives = 403/404 (99%), Gaps = 0/404 (0%) Query 1 VATIAQRLRDDHGVAASESSVRRWIATHFAEEVARERVTVPRGPVDAGSEAQIDYGRLGM 60 +ATIAQRLRDDHGVAASESSVRRWIATHFAEEVARERVTVPRGPVDAGSEAQIDYGRLGM Sbjct 1 MATIAQRLRDDHGVAASESSVRRWIATHFAEEVARERVTVPRGPVDAGSEAQIDYGRLGM 60 Query 61 WFDPATARRVAVWAFVMVLAFSRHLFVRPVIRMDQTAWCACHVAAFEFFDGVPARLVCDN 120 WFDPATARRVAVWAFVMVLAFSRHLFVRPVIRMDQTAWCACHVAAFEFFDGVPARLVCDN Sbjct 61 WFDPATARRVAVWAFVMVLAFSRHLFVRPVIRMDQTAWCACHVAAFEFFDGVPARLVCDN 120 Query 121 LRTGVDKPDLYDPQINRSYAELASHYATLVDPARARKPKDKPRVERPMTYVRDSFWKGRE 180 LRTGVDKPDLYDPQINRSYAELASHYATLVDPARARKPKDKPRVERPMTYVRDSFWKGRE Sbjct 121 LRTGVDKPDLYDPQINRSYAELASHYATLVDPARARKPKDKPRVERPMTYVRDSFWKGRE 180 Query 181 FDSLAQMQQAAVTWSTEVAGLRYLRALEGAQPLRMFEAVEQQALIALPPRAFELTSWSIG 240 FDSLAQMQQAAVTWSTEVAGLRYLRALEGAQPLRMFEAVEQQALIALPPRAFELTSWSIG Sbjct 181 FDSLAQMQQAAVTWSTEVAGLRYLRALEGAQPLRMFEAVEQQALIALPPRAFELTSWSIG 240 Query 241 TVGVDTHLKVGKALYSVPWRLIGQRLHARTAGDVVQIFAGNDVVATHVRRPSGRSTDFSH 300 TVGVDTHLKVGKALYSVPWRLIGQRLHARTAGDVVQIFAGNDVVATHVRRPSGRSTDFSH Sbjct 241 TVGVDTHLKVGKALYSVPWRLIGQRLHARTAGDVVQIFAGNDVVATHVRRPSGRSTDFSH 300 Query 301 YPPEKIAFHMRTPTWCRHTAELVGPASQQVIAEFMRDNAIHHLRSAQGVLGLRDKHGCDR 360 YPPEKIAFHMRTPTWCRHTAELVGPA QQVIAEFMRDNAIHHLRSAQGVLGLRDKHGCDR Sbjct 301 YPPEKIAFHMRTPTWCRHTAELVGPACQQVIAEFMRDNAIHHLRSAQGVLGLRDKHGCDR 360 Query 361 LEAACARAIEVGDPSYRTIKGILVAGTEHAANEPTTSSPASTAG 404 LEAACARAIEVGDPSYRTIKGILVAGTEHAANEPTTSSPASTAG Sbjct 361 LEAACARAIEVGDPSYRTIKGILVAGTEHAANEPTTSSPASTAG 404 >gi|148824633|ref|YP_001289387.1| transposase [Mycobacterium tuberculosis F11] gi|289747257|ref|ZP_06506635.1| transposase [Mycobacterium tuberculosis 02_1987] gi|148723160|gb|ABR07785.1| transposase [Mycobacterium tuberculosis F11] gi|289687785|gb|EFD55273.1| transposase [Mycobacterium tuberculosis 02_1987] Length=694 Score = 827 bits (2137), Expect = 0.0, Method: Compositional matrix adjust. Identities = 402/404 (99%), Positives = 403/404 (99%), Gaps = 0/404 (0%) Query 1 VATIAQRLRDDHGVAASESSVRRWIATHFAEEVARERVTVPRGPVDAGSEAQIDYGRLGM 60 +ATIAQRLRDDHGVAASESSVRRWIATHFAEEVARERVTVPRGPVDAGSEAQIDYGRLGM Sbjct 1 MATIAQRLRDDHGVAASESSVRRWIATHFAEEVARERVTVPRGPVDAGSEAQIDYGRLGM 60 Query 61 WFDPATARRVAVWAFVMVLAFSRHLFVRPVIRMDQTAWCACHVAAFEFFDGVPARLVCDN 120 WFDPATARRVAVWAFVMVLAFSRHLFVRPVIRMDQTAWCACHVAAFEFFDGVPARLVCDN Sbjct 61 WFDPATARRVAVWAFVMVLAFSRHLFVRPVIRMDQTAWCACHVAAFEFFDGVPARLVCDN 120 Query 121 LRTGVDKPDLYDPQINRSYAELASHYATLVDPARARKPKDKPRVERPMTYVRDSFWKGRE 180 LRTGVDKPDLYDPQINRSYAELASHYATLVDPARARKPKDKPRVERPMTYVRDSFWKGRE Sbjct 121 LRTGVDKPDLYDPQINRSYAELASHYATLVDPARARKPKDKPRVERPMTYVRDSFWKGRE 180 Query 181 FDSLAQMQQAAVTWSTEVAGLRYLRALEGAQPLRMFEAVEQQALIALPPRAFELTSWSIG 240 FDSLAQMQQAAVTWSTEVAGLRYLRALEGAQPLRMFEAVEQQALIALPPRAFELTSWSIG Sbjct 181 FDSLAQMQQAAVTWSTEVAGLRYLRALEGAQPLRMFEAVEQQALIALPPRAFELTSWSIG 240 Query 241 TVGVDTHLKVGKALYSVPWRLIGQRLHARTAGDVVQIFAGNDVVATHVRRPSGRSTDFSH 300 TVGVDTHLKVGKALYSVPWRLIGQRLHARTAGDVVQIFAGNDVVATHVRRPSGRSTDFSH Sbjct 241 TVGVDTHLKVGKALYSVPWRLIGQRLHARTAGDVVQIFAGNDVVATHVRRPSGRSTDFSH 300 Query 301 YPPEKIAFHMRTPTWCRHTAELVGPASQQVIAEFMRDNAIHHLRSAQGVLGLRDKHGCDR 360 YPPEKIAFHMRTPTWCRHTAELVGPA QQVIAEFMRDNAIHHLRSAQGVLGLRDKHGCDR Sbjct 301 YPPEKIAFHMRTPTWCRHTAELVGPACQQVIAEFMRDNAIHHLRSAQGVLGLRDKHGCDR 360 Query 361 LEAACARAIEVGDPSYRTIKGILVAGTEHAANEPTTSSPASTAG 404 LEAACARAIEVGDPSYRTIKGILVAGTEHAANEPTTSSPASTAG Sbjct 361 LEAACARAIEVGDPSYRTIKGILVAGTEHAANEPTTSSPASTAG 404 >gi|289449125|ref|ZP_06438869.1| transposase [Mycobacterium tuberculosis CPHL_A] gi|289422083|gb|EFD19284.1| transposase [Mycobacterium tuberculosis CPHL_A] Length=724 Score = 825 bits (2132), Expect = 0.0, Method: Compositional matrix adjust. Identities = 402/404 (99%), Positives = 403/404 (99%), Gaps = 0/404 (0%) Query 1 VATIAQRLRDDHGVAASESSVRRWIATHFAEEVARERVTVPRGPVDAGSEAQIDYGRLGM 60 VATIAQRLRDDHGVAASESSVRRWIATHFAEEVARERVTVPRGPVDAGSEAQIDYGRLGM Sbjct 31 VATIAQRLRDDHGVAASESSVRRWIATHFAEEVARERVTVPRGPVDAGSEAQIDYGRLGM 90 Query 61 WFDPATARRVAVWAFVMVLAFSRHLFVRPVIRMDQTAWCACHVAAFEFFDGVPARLVCDN 120 WFDPATARRVAVWAFVMVLAFSRHLFVRPVIRMDQTAWCACHVAAFEFFDGVPARLVCDN Sbjct 91 WFDPATARRVAVWAFVMVLAFSRHLFVRPVIRMDQTAWCACHVAAFEFFDGVPARLVCDN 150 Query 121 LRTGVDKPDLYDPQINRSYAELASHYATLVDPARARKPKDKPRVERPMTYVRDSFWKGRE 180 LRTGVDKPDLYDPQINRSYAELASHYATLVDPARARKPKDKPRVERPMTYVRDSFWKGRE Sbjct 151 LRTGVDKPDLYDPQINRSYAELASHYATLVDPARARKPKDKPRVERPMTYVRDSFWKGRE 210 Query 181 FDSLAQMQQAAVTWSTEVAGLRYLRALEGAQPLRMFEAVEQQALIALPPRAFELTSWSIG 240 FDSLAQMQQAAVTWSTEVAGLRYLRALEGAQPLR+FEAVEQQALIALPPRAFELTSWSIG Sbjct 211 FDSLAQMQQAAVTWSTEVAGLRYLRALEGAQPLRVFEAVEQQALIALPPRAFELTSWSIG 270 Query 241 TVGVDTHLKVGKALYSVPWRLIGQRLHARTAGDVVQIFAGNDVVATHVRRPSGRSTDFSH 300 TVGVDTHLKVGKALYSVPWRLIGQRLHARTAGDVVQIFAGNDVVATHVRRPSGRSTDFSH Sbjct 271 TVGVDTHLKVGKALYSVPWRLIGQRLHARTAGDVVQIFAGNDVVATHVRRPSGRSTDFSH 330 Query 301 YPPEKIAFHMRTPTWCRHTAELVGPASQQVIAEFMRDNAIHHLRSAQGVLGLRDKHGCDR 360 YPPEKIAFHMRTPTWCRHTAELVGPA QQVIAEFMRDNAIHHLRSAQGVLGLRDKHGCDR Sbjct 331 YPPEKIAFHMRTPTWCRHTAELVGPACQQVIAEFMRDNAIHHLRSAQGVLGLRDKHGCDR 390 Query 361 LEAACARAIEVGDPSYRTIKGILVAGTEHAANEPTTSSPASTAG 404 LEAACARAIEVGDPSYRTIKGILVAGTEHAANEPTTSSPASTAG Sbjct 391 LEAACARAIEVGDPSYRTIKGILVAGTEHAANEPTTSSPASTAG 434 >gi|289444915|ref|ZP_06434659.1| transposase [Mycobacterium tuberculosis T46] gi|289417834|gb|EFD15074.1| transposase [Mycobacterium tuberculosis T46] Length=694 Score = 825 bits (2131), Expect = 0.0, Method: Compositional matrix adjust. Identities = 401/404 (99%), Positives = 403/404 (99%), Gaps = 0/404 (0%) Query 1 VATIAQRLRDDHGVAASESSVRRWIATHFAEEVARERVTVPRGPVDAGSEAQIDYGRLGM 60 +ATIAQRLRDDHGVAASESSVRRWIATHFAEEVARERVTVPRGPVDAGSEAQIDYGRLGM Sbjct 1 MATIAQRLRDDHGVAASESSVRRWIATHFAEEVARERVTVPRGPVDAGSEAQIDYGRLGM 60 Query 61 WFDPATARRVAVWAFVMVLAFSRHLFVRPVIRMDQTAWCACHVAAFEFFDGVPARLVCDN 120 WFDPATARRVAVWAFVMVLAFSRHLFVRPVIRMDQTAWCACHVAAFEFFDGVPARLVCDN Sbjct 61 WFDPATARRVAVWAFVMVLAFSRHLFVRPVIRMDQTAWCACHVAAFEFFDGVPARLVCDN 120 Query 121 LRTGVDKPDLYDPQINRSYAELASHYATLVDPARARKPKDKPRVERPMTYVRDSFWKGRE 180 LRTGVDKPDLYDPQINRSYAELASHYATLVDPARARKPKDKPRVERPMTYVRDSFWKGRE Sbjct 121 LRTGVDKPDLYDPQINRSYAELASHYATLVDPARARKPKDKPRVERPMTYVRDSFWKGRE 180 Query 181 FDSLAQMQQAAVTWSTEVAGLRYLRALEGAQPLRMFEAVEQQALIALPPRAFELTSWSIG 240 FDSLAQMQQAAVTWSTEVAGLRYLRALEGAQPLR+FEAVEQQALIALPPRAFELTSWSIG Sbjct 181 FDSLAQMQQAAVTWSTEVAGLRYLRALEGAQPLRVFEAVEQQALIALPPRAFELTSWSIG 240 Query 241 TVGVDTHLKVGKALYSVPWRLIGQRLHARTAGDVVQIFAGNDVVATHVRRPSGRSTDFSH 300 TVGVDTHLKVGKALYSVPWRLIGQRLHARTAGDVVQIFAGNDVVATHVRRPSGRSTDFSH Sbjct 241 TVGVDTHLKVGKALYSVPWRLIGQRLHARTAGDVVQIFAGNDVVATHVRRPSGRSTDFSH 300 Query 301 YPPEKIAFHMRTPTWCRHTAELVGPASQQVIAEFMRDNAIHHLRSAQGVLGLRDKHGCDR 360 YPPEKIAFHMRTPTWCRHTAELVGPA QQVIAEFMRDNAIHHLRSAQGVLGLRDKHGCDR Sbjct 301 YPPEKIAFHMRTPTWCRHTAELVGPACQQVIAEFMRDNAIHHLRSAQGVLGLRDKHGCDR 360 Query 361 LEAACARAIEVGDPSYRTIKGILVAGTEHAANEPTTSSPASTAG 404 LEAACARAIEVGDPSYRTIKGILVAGTEHAANEPTTSSPASTAG Sbjct 361 LEAACARAIEVGDPSYRTIKGILVAGTEHAANEPTTSSPASTAG 404 >gi|289759588|ref|ZP_06518966.1| LOW QUALITY PROTEIN: transposase [Mycobacterium tuberculosis T85] gi|289715152|gb|EFD79164.1| LOW QUALITY PROTEIN: transposase [Mycobacterium tuberculosis T85] Length=410 Score = 824 bits (2128), Expect = 0.0, Method: Compositional matrix adjust. Identities = 402/404 (99%), Positives = 403/404 (99%), Gaps = 0/404 (0%) Query 1 VATIAQRLRDDHGVAASESSVRRWIATHFAEEVARERVTVPRGPVDAGSEAQIDYGRLGM 60 +ATIAQRLRDDHGVAASESSVRRWIATHFAEEVARERVTVPRGPVDAGSEAQIDYGRLGM Sbjct 1 MATIAQRLRDDHGVAASESSVRRWIATHFAEEVARERVTVPRGPVDAGSEAQIDYGRLGM 60 Query 61 WFDPATARRVAVWAFVMVLAFSRHLFVRPVIRMDQTAWCACHVAAFEFFDGVPARLVCDN 120 WFDPATARRVAVWAFVMVLAFSRHLFVRPVIRMDQTAWCACHVAAFEFFDGVPARLVCDN Sbjct 61 WFDPATARRVAVWAFVMVLAFSRHLFVRPVIRMDQTAWCACHVAAFEFFDGVPARLVCDN 120 Query 121 LRTGVDKPDLYDPQINRSYAELASHYATLVDPARARKPKDKPRVERPMTYVRDSFWKGRE 180 LRTGVDKPDLYDPQINRSYAELASHYATLVDPARARKPKDKPRVERPMTYVRDSFWKGRE Sbjct 121 LRTGVDKPDLYDPQINRSYAELASHYATLVDPARARKPKDKPRVERPMTYVRDSFWKGRE 180 Query 181 FDSLAQMQQAAVTWSTEVAGLRYLRALEGAQPLRMFEAVEQQALIALPPRAFELTSWSIG 240 FDSLAQMQQAAVTWSTEVAGLRYLRALEGAQPLRMFEAVEQQALIALPPRAFELTSWSIG Sbjct 181 FDSLAQMQQAAVTWSTEVAGLRYLRALEGAQPLRMFEAVEQQALIALPPRAFELTSWSIG 240 Query 241 TVGVDTHLKVGKALYSVPWRLIGQRLHARTAGDVVQIFAGNDVVATHVRRPSGRSTDFSH 300 TVGVDTHLKVGKALYSVPWRLIGQRLHARTAGDVVQIFAGNDVVATHVRRPSGRSTDFSH Sbjct 241 TVGVDTHLKVGKALYSVPWRLIGQRLHARTAGDVVQIFAGNDVVATHVRRPSGRSTDFSH 300 Query 301 YPPEKIAFHMRTPTWCRHTAELVGPASQQVIAEFMRDNAIHHLRSAQGVLGLRDKHGCDR 360 YPPEKIAFHMRTPTWCRHTAELVGPA QQVIAEFMRDNAIHHLRSAQGVLGLRDKHGCDR Sbjct 301 YPPEKIAFHMRTPTWCRHTAELVGPACQQVIAEFMRDNAIHHLRSAQGVLGLRDKHGCDR 360 Query 361 LEAACARAIEVGDPSYRTIKGILVAGTEHAANEPTTSSPASTAG 404 LEAACARAIEVGDPSYRTIKGILVAGTEHAANEPTTSSPASTAG Sbjct 361 LEAACARAIEVGDPSYRTIKGILVAGTEHAANEPTTSSPASTAG 404 >gi|326905270|gb|EGE52203.1| transposase [Mycobacterium tuberculosis W-148] gi|339296251|gb|AEJ48362.1| transposase [Mycobacterium tuberculosis CCDC5079] gi|339299853|gb|AEJ51963.1| transposase [Mycobacterium tuberculosis CCDC5180] Length=522 Score = 823 bits (2126), Expect = 0.0, Method: Compositional matrix adjust. Identities = 402/404 (99%), Positives = 403/404 (99%), Gaps = 0/404 (0%) Query 1 VATIAQRLRDDHGVAASESSVRRWIATHFAEEVARERVTVPRGPVDAGSEAQIDYGRLGM 60 +ATIAQRLRDDHGVAASESSVRRWIATHFAEEVARERVTVPRGPVDAGSEAQIDYGRLGM Sbjct 1 MATIAQRLRDDHGVAASESSVRRWIATHFAEEVARERVTVPRGPVDAGSEAQIDYGRLGM 60 Query 61 WFDPATARRVAVWAFVMVLAFSRHLFVRPVIRMDQTAWCACHVAAFEFFDGVPARLVCDN 120 WFDPATARRVAVWAFVMVLAFSRHLFVRPVIRMDQTAWCACHVAAFEFFDGVPARLVCDN Sbjct 61 WFDPATARRVAVWAFVMVLAFSRHLFVRPVIRMDQTAWCACHVAAFEFFDGVPARLVCDN 120 Query 121 LRTGVDKPDLYDPQINRSYAELASHYATLVDPARARKPKDKPRVERPMTYVRDSFWKGRE 180 LRTGVDKPDLYDPQINRSYAELASHYATLVDPARARKPKDKPRVERPMTYVRDSFWKGRE Sbjct 121 LRTGVDKPDLYDPQINRSYAELASHYATLVDPARARKPKDKPRVERPMTYVRDSFWKGRE 180 Query 181 FDSLAQMQQAAVTWSTEVAGLRYLRALEGAQPLRMFEAVEQQALIALPPRAFELTSWSIG 240 FDSLAQMQQAAVTWSTEVAGLRYLRALEGAQPLRMFEAVEQQALIALPPRAFELTSWSIG Sbjct 181 FDSLAQMQQAAVTWSTEVAGLRYLRALEGAQPLRMFEAVEQQALIALPPRAFELTSWSIG 240 Query 241 TVGVDTHLKVGKALYSVPWRLIGQRLHARTAGDVVQIFAGNDVVATHVRRPSGRSTDFSH 300 TVGVDTHLKVGKALYSVPWRLIGQRLHARTAGDVVQIFAGNDVVATHVRRPSGRSTDFSH Sbjct 241 TVGVDTHLKVGKALYSVPWRLIGQRLHARTAGDVVQIFAGNDVVATHVRRPSGRSTDFSH 300 Query 301 YPPEKIAFHMRTPTWCRHTAELVGPASQQVIAEFMRDNAIHHLRSAQGVLGLRDKHGCDR 360 YPPEKIAFHMRTPTWCRHTAELVGPA QQVIAEFMRDNAIHHLRSAQGVLGLRDKHGCDR Sbjct 301 YPPEKIAFHMRTPTWCRHTAELVGPACQQVIAEFMRDNAIHHLRSAQGVLGLRDKHGCDR 360 Query 361 LEAACARAIEVGDPSYRTIKGILVAGTEHAANEPTTSSPASTAG 404 LEAACARAIEVGDPSYRTIKGILVAGTEHAANEPTTSSPASTAG Sbjct 361 LEAACARAIEVGDPSYRTIKGILVAGTEHAANEPTTSSPASTAG 404 >gi|339633432|ref|YP_004725074.1| transposase [Mycobacterium africanum GM041182] gi|339332788|emb|CCC28511.1| putative transposase [Mycobacterium africanum GM041182] Length=411 Score = 822 bits (2124), Expect = 0.0, Method: Compositional matrix adjust. Identities = 401/404 (99%), Positives = 403/404 (99%), Gaps = 0/404 (0%) Query 1 VATIAQRLRDDHGVAASESSVRRWIATHFAEEVARERVTVPRGPVDAGSEAQIDYGRLGM 60 +ATIAQRLRDDHGVAASESSVRRWIATHFAEEVARERVTVPRGPVDAGSEAQIDYGRLGM Sbjct 1 MATIAQRLRDDHGVAASESSVRRWIATHFAEEVARERVTVPRGPVDAGSEAQIDYGRLGM 60 Query 61 WFDPATARRVAVWAFVMVLAFSRHLFVRPVIRMDQTAWCACHVAAFEFFDGVPARLVCDN 120 WFDPATARRVAVWAFVMVLAFSRHLFVRPVIRMDQTAWCACHVAAFEFFDGVPARLVCDN Sbjct 61 WFDPATARRVAVWAFVMVLAFSRHLFVRPVIRMDQTAWCACHVAAFEFFDGVPARLVCDN 120 Query 121 LRTGVDKPDLYDPQINRSYAELASHYATLVDPARARKPKDKPRVERPMTYVRDSFWKGRE 180 LRTGVDKPDLYDPQINRSYAELASHYATLVDPARARKPKDKPRVERPMTYVRDSFWKGRE Sbjct 121 LRTGVDKPDLYDPQINRSYAELASHYATLVDPARARKPKDKPRVERPMTYVRDSFWKGRE 180 Query 181 FDSLAQMQQAAVTWSTEVAGLRYLRALEGAQPLRMFEAVEQQALIALPPRAFELTSWSIG 240 FDSLAQMQQAAVTWSTEVAGLRYLRALEGAQPLR+FEAVEQQALIALPPRAFELTSWSIG Sbjct 181 FDSLAQMQQAAVTWSTEVAGLRYLRALEGAQPLRVFEAVEQQALIALPPRAFELTSWSIG 240 Query 241 TVGVDTHLKVGKALYSVPWRLIGQRLHARTAGDVVQIFAGNDVVATHVRRPSGRSTDFSH 300 TVGVDTHLKVGKALYSVPWRLIGQRLHARTAGDVVQIFAGNDVVATHVRRPSGRSTDFSH Sbjct 241 TVGVDTHLKVGKALYSVPWRLIGQRLHARTAGDVVQIFAGNDVVATHVRRPSGRSTDFSH 300 Query 301 YPPEKIAFHMRTPTWCRHTAELVGPASQQVIAEFMRDNAIHHLRSAQGVLGLRDKHGCDR 360 YPPEKIAFHMRTPTWCRHTAELVGPA QQVIAEFMRDNAIHHLRSAQGVLGLRDKHGCDR Sbjct 301 YPPEKIAFHMRTPTWCRHTAELVGPACQQVIAEFMRDNAIHHLRSAQGVLGLRDKHGCDR 360 Query 361 LEAACARAIEVGDPSYRTIKGILVAGTEHAANEPTTSSPASTAG 404 LEAACARAIEVGDPSYRTIKGILVAGTEHAANEPTTSSPASTAG Sbjct 361 LEAACARAIEVGDPSYRTIKGILVAGTEHAANEPTTSSPASTAG 404 >gi|289752147|ref|ZP_06511525.1| LOW QUALITY PROTEIN: transposase [Mycobacterium tuberculosis T92] gi|289692734|gb|EFD60163.1| LOW QUALITY PROTEIN: transposase [Mycobacterium tuberculosis T92] Length=410 Score = 822 bits (2123), Expect = 0.0, Method: Compositional matrix adjust. Identities = 401/404 (99%), Positives = 403/404 (99%), Gaps = 0/404 (0%) Query 1 VATIAQRLRDDHGVAASESSVRRWIATHFAEEVARERVTVPRGPVDAGSEAQIDYGRLGM 60 +ATIAQRLRDDHGVAASESSVRRWIATHFAEEVARERVTVPRGPVDAGSEAQIDYGRLGM Sbjct 1 MATIAQRLRDDHGVAASESSVRRWIATHFAEEVARERVTVPRGPVDAGSEAQIDYGRLGM 60 Query 61 WFDPATARRVAVWAFVMVLAFSRHLFVRPVIRMDQTAWCACHVAAFEFFDGVPARLVCDN 120 WFDPATARRVAVWAFVMVLAFSRHLFVRPVIRMDQTAWCACHVAAFEFFDGVPARLVCDN Sbjct 61 WFDPATARRVAVWAFVMVLAFSRHLFVRPVIRMDQTAWCACHVAAFEFFDGVPARLVCDN 120 Query 121 LRTGVDKPDLYDPQINRSYAELASHYATLVDPARARKPKDKPRVERPMTYVRDSFWKGRE 180 LRTGVDKPDLYDPQINRSYAELASHYATLVDPARARKPKDKPRVERPMTYVRDSFWKGRE Sbjct 121 LRTGVDKPDLYDPQINRSYAELASHYATLVDPARARKPKDKPRVERPMTYVRDSFWKGRE 180 Query 181 FDSLAQMQQAAVTWSTEVAGLRYLRALEGAQPLRMFEAVEQQALIALPPRAFELTSWSIG 240 FDSLAQMQQAAVTWSTEVAGLRYLRALEGAQPLR+FEAVEQQALIALPPRAFELTSWSIG Sbjct 181 FDSLAQMQQAAVTWSTEVAGLRYLRALEGAQPLRVFEAVEQQALIALPPRAFELTSWSIG 240 Query 241 TVGVDTHLKVGKALYSVPWRLIGQRLHARTAGDVVQIFAGNDVVATHVRRPSGRSTDFSH 300 TVGVDTHLKVGKALYSVPWRLIGQRLHARTAGDVVQIFAGNDVVATHVRRPSGRSTDFSH Sbjct 241 TVGVDTHLKVGKALYSVPWRLIGQRLHARTAGDVVQIFAGNDVVATHVRRPSGRSTDFSH 300 Query 301 YPPEKIAFHMRTPTWCRHTAELVGPASQQVIAEFMRDNAIHHLRSAQGVLGLRDKHGCDR 360 YPPEKIAFHMRTPTWCRHTAELVGPA QQVIAEFMRDNAIHHLRSAQGVLGLRDKHGCDR Sbjct 301 YPPEKIAFHMRTPTWCRHTAELVGPACQQVIAEFMRDNAIHHLRSAQGVLGLRDKHGCDR 360 Query 361 LEAACARAIEVGDPSYRTIKGILVAGTEHAANEPTTSSPASTAG 404 LEAACARAIEVGDPSYRTIKGILVAGTEHAANEPTTSSPASTAG Sbjct 361 LEAACARAIEVGDPSYRTIKGILVAGTEHAANEPTTSSPASTAG 404 >gi|289755557|ref|ZP_06514935.1| LOW QUALITY PROTEIN: transposase [Mycobacterium tuberculosis EAS054] gi|289696144|gb|EFD63573.1| LOW QUALITY PROTEIN: transposase [Mycobacterium tuberculosis EAS054] Length=410 Score = 819 bits (2115), Expect = 0.0, Method: Compositional matrix adjust. Identities = 400/404 (99%), Positives = 402/404 (99%), Gaps = 0/404 (0%) Query 1 VATIAQRLRDDHGVAASESSVRRWIATHFAEEVARERVTVPRGPVDAGSEAQIDYGRLGM 60 +ATIAQRLRDDHGVAASESSVRRWIATHFAEEVARERVTVPRGPVDAGSEAQIDYGRLGM Sbjct 1 MATIAQRLRDDHGVAASESSVRRWIATHFAEEVARERVTVPRGPVDAGSEAQIDYGRLGM 60 Query 61 WFDPATARRVAVWAFVMVLAFSRHLFVRPVIRMDQTAWCACHVAAFEFFDGVPARLVCDN 120 WFDPATARRVAVWAFVMVLAFSRHLFVRPVIRMDQTAWCACHVAAFEFFDGVPARLVCDN Sbjct 61 WFDPATARRVAVWAFVMVLAFSRHLFVRPVIRMDQTAWCACHVAAFEFFDGVPARLVCDN 120 Query 121 LRTGVDKPDLYDPQINRSYAELASHYATLVDPARARKPKDKPRVERPMTYVRDSFWKGRE 180 LRTGVDKPDLYDPQINRSYAELASHYATLVDPARARKPKDKPRVERPMTYVRDSFWKGRE Sbjct 121 LRTGVDKPDLYDPQINRSYAELASHYATLVDPARARKPKDKPRVERPMTYVRDSFWKGRE 180 Query 181 FDSLAQMQQAAVTWSTEVAGLRYLRALEGAQPLRMFEAVEQQALIALPPRAFELTSWSIG 240 FDSLAQMQQAAVTWSTEVAGLRYLRALEGAQPLR+FEAVEQQALIALPPRAFELTSWSIG Sbjct 181 FDSLAQMQQAAVTWSTEVAGLRYLRALEGAQPLRVFEAVEQQALIALPPRAFELTSWSIG 240 Query 241 TVGVDTHLKVGKALYSVPWRLIGQRLHARTAGDVVQIFAGNDVVATHVRRPSGRSTDFSH 300 TVGVDTHLKVGKALYSVPWRLIGQRLHARTAGDVVQIFAGNDVVATHVRRPSGRSTDFSH Sbjct 241 TVGVDTHLKVGKALYSVPWRLIGQRLHARTAGDVVQIFAGNDVVATHVRRPSGRSTDFSH 300 Query 301 YPPEKIAFHMRTPTWCRHTAELVGPASQQVIAEFMRDNAIHHLRSAQGVLGLRDKHGCDR 360 YPPEKIAFHMRTPTWCRHTAELVGPA QQVIAEFMRDNAIHHLRSAQGVLGLRDKHGCDR Sbjct 301 YPPEKIAFHMRTPTWCRHTAELVGPACQQVIAEFMRDNAIHHLRSAQGVLGLRDKHGCDR 360 Query 361 LEAACARAIEVGDPSYRTIKGILVAGTEHAANEPTTSSPASTAG 404 LEAACARAIEVGDPSYRTIKGILVAGTE AANEPTTSSPASTAG Sbjct 361 LEAACARAIEVGDPSYRTIKGILVAGTERAANEPTTSSPASTAG 404 >gi|289576159|ref|ZP_06456386.1| LOW QUALITY PROTEIN: transposase [Mycobacterium tuberculosis K85] gi|289540590|gb|EFD45168.1| LOW QUALITY PROTEIN: transposase [Mycobacterium tuberculosis K85] Length=644 Score = 702 bits (1811), Expect = 0.0, Method: Compositional matrix adjust. Identities = 339/341 (99%), Positives = 340/341 (99%), Gaps = 0/341 (0%) Query 64 PATARRVAVWAFVMVLAFSRHLFVRPVIRMDQTAWCACHVAAFEFFDGVPARLVCDNLRT 123 PATARRVAVWAFVMVLAFSRHLFVRPVIRMDQTAWCACHVAAFEFFDGVPARLVCDNLRT Sbjct 14 PATARRVAVWAFVMVLAFSRHLFVRPVIRMDQTAWCACHVAAFEFFDGVPARLVCDNLRT 73 Query 124 GVDKPDLYDPQINRSYAELASHYATLVDPARARKPKDKPRVERPMTYVRDSFWKGREFDS 183 GVDKPDLYDPQINRSYAELASHYATLVDPARARKPKDKPRVERPMTYVRDSFWKGREFDS Sbjct 74 GVDKPDLYDPQINRSYAELASHYATLVDPARARKPKDKPRVERPMTYVRDSFWKGREFDS 133 Query 184 LAQMQQAAVTWSTEVAGLRYLRALEGAQPLRMFEAVEQQALIALPPRAFELTSWSIGTVG 243 LAQMQQAAVTWSTEVAGLRYLRALEGAQPLR+FEAVEQQALIALPPRAFELTSWSIGTVG Sbjct 134 LAQMQQAAVTWSTEVAGLRYLRALEGAQPLRVFEAVEQQALIALPPRAFELTSWSIGTVG 193 Query 244 VDTHLKVGKALYSVPWRLIGQRLHARTAGDVVQIFAGNDVVATHVRRPSGRSTDFSHYPP 303 VDTHLKVGKALYSVPWRLIGQRLHARTAGDVVQIFAGNDVVATHVRRPSGRSTDFSHYPP Sbjct 194 VDTHLKVGKALYSVPWRLIGQRLHARTAGDVVQIFAGNDVVATHVRRPSGRSTDFSHYPP 253 Query 304 EKIAFHMRTPTWCRHTAELVGPASQQVIAEFMRDNAIHHLRSAQGVLGLRDKHGCDRLEA 363 EKIAFHMRTPTWCRHTAELVGPA QQVIAEFMRDNAIHHLRSAQGVLGLRDKHGCDRLEA Sbjct 254 EKIAFHMRTPTWCRHTAELVGPACQQVIAEFMRDNAIHHLRSAQGVLGLRDKHGCDRLEA 313 Query 364 ACARAIEVGDPSYRTIKGILVAGTEHAANEPTTSSPASTAG 404 ACARAIEVGDPSYRTIKGILVAGTEHAANEPTTSSPASTAG Sbjct 314 ACARAIEVGDPSYRTIKGILVAGTEHAANEPTTSSPASTAG 354 >gi|289571654|ref|ZP_06451881.1| transposase [Mycobacterium tuberculosis T17] gi|289545408|gb|EFD49056.1| transposase [Mycobacterium tuberculosis T17] Length=346 Score = 676 bits (1745), Expect = 0.0, Method: Compositional matrix adjust. Identities = 330/333 (99%), Positives = 332/333 (99%), Gaps = 0/333 (0%) Query 1 VATIAQRLRDDHGVAASESSVRRWIATHFAEEVARERVTVPRGPVDAGSEAQIDYGRLGM 60 +ATIAQRLRDDHGVAASESSVRRWIATHFAEEVARERVTVPRGPVDAGSEAQIDYGRLGM Sbjct 1 MATIAQRLRDDHGVAASESSVRRWIATHFAEEVARERVTVPRGPVDAGSEAQIDYGRLGM 60 Query 61 WFDPATARRVAVWAFVMVLAFSRHLFVRPVIRMDQTAWCACHVAAFEFFDGVPARLVCDN 120 WFDPATARRVAVWAFVMVLAFSRHLFVRPVIRMDQTAWCACHVAAFEFFDGVPARLVCDN Sbjct 61 WFDPATARRVAVWAFVMVLAFSRHLFVRPVIRMDQTAWCACHVAAFEFFDGVPARLVCDN 120 Query 121 LRTGVDKPDLYDPQINRSYAELASHYATLVDPARARKPKDKPRVERPMTYVRDSFWKGRE 180 LRTGVDKPDLYDPQINRSYAELASHYATLVDPARARKPKDKPRVERPMTYVRDSFWKGRE Sbjct 121 LRTGVDKPDLYDPQINRSYAELASHYATLVDPARARKPKDKPRVERPMTYVRDSFWKGRE 180 Query 181 FDSLAQMQQAAVTWSTEVAGLRYLRALEGAQPLRMFEAVEQQALIALPPRAFELTSWSIG 240 FDSLAQMQQAAVTWSTEVAGLRYLRALEGAQPLR+FEAVEQQALIALPPRAFELTSWSIG Sbjct 181 FDSLAQMQQAAVTWSTEVAGLRYLRALEGAQPLRVFEAVEQQALIALPPRAFELTSWSIG 240 Query 241 TVGVDTHLKVGKALYSVPWRLIGQRLHARTAGDVVQIFAGNDVVATHVRRPSGRSTDFSH 300 TVGVDTHLKVGKALYSVPWRLIGQRLHARTAGDVVQIFAGNDVVATHVRRPSGRSTDFSH Sbjct 241 TVGVDTHLKVGKALYSVPWRLIGQRLHARTAGDVVQIFAGNDVVATHVRRPSGRSTDFSH 300 Query 301 YPPEKIAFHMRTPTWCRHTAELVGPASQQVIAE 333 YPPEKIAFHMRTPTWCRHTAELVGPA QQVIAE Sbjct 301 YPPEKIAFHMRTPTWCRHTAELVGPACQQVIAE 333 >gi|262200379|ref|YP_003271587.1| integrase catalytic domain-containing protein [Gordonia bronchialis DSM 43247] gi|262201284|ref|YP_003272492.1| integrase catalytic domain-containing protein [Gordonia bronchialis DSM 43247] gi|262201833|ref|YP_003273041.1| integrase catalytic domain-containing protein [Gordonia bronchialis DSM 43247] gi|262204083|ref|YP_003275291.1| integrase catalytic domain-containing protein [Gordonia bronchialis DSM 43247] gi|262083726|gb|ACY19694.1| Integrase catalytic region [Gordonia bronchialis DSM 43247] gi|262084631|gb|ACY20599.1| Integrase catalytic region [Gordonia bronchialis DSM 43247] gi|262085180|gb|ACY21148.1| Integrase catalytic region [Gordonia bronchialis DSM 43247] gi|262087430|gb|ACY23398.1| Integrase catalytic region [Gordonia bronchialis DSM 43247] Length=518 Score = 499 bits (1284), Expect = 4e-139, Method: Compositional matrix adjust. Identities = 239/401 (60%), Positives = 296/401 (74%), Gaps = 2/401 (0%) Query 1 VATIAQRLRDDHGVAASESSVRRWIATHFAEEVARERVTVPRGPVDAGSEAQIDYGRLGM 60 VATIAQRLRDDHGV SESSVRR++ HFA+++ +R T PR PV AG EAQ+DYG+LGM Sbjct 97 VATIAQRLRDDHGVDVSESSVRRYVTAHFADKINEKRATPPRPPVPAGEEAQVDYGKLGM 156 Query 61 WFDPATARRVAVWAFVMVLAFSRHLFVRPVIRMDQTAWCACHVAAFEFFDGVPARLVCDN 120 W +P T +RV+VWAF ++L+ SR LFV+PV++MDQT+WCA HV AFEFF GVP R+VCDN Sbjct 157 WTNPETGKRVSVWAFAIILSCSRWLFVQPVLKMDQTSWCASHVDAFEFFGGVPERIVCDN 216 Query 121 LRTGVDKPDLYDPQINRSYAELASHYATLVDPARARKPKDKPRVERPMTYVRDSFWKGRE 180 L+TGV KPDLYDPQINR+YAELAS Y L+DPARA PKDKPR+ERPM Y+RDSF+ GRE Sbjct 217 LKTGVSKPDLYDPQINRAYAELASFYEVLIDPARAFTPKDKPRIERPMPYIRDSFFTGRE 276 Query 181 FDSLAQMQQAAVTWSTEVAGLRYLRALEGAQPLRMFEAVEQQALIALPPRAFELTSWSIG 240 F SL QMQQAA+ W V G R ++G P +F +E+ L LPPR FE ++ +G Sbjct 277 FTSLPQMQQAALDWCLNVYGRHAHRGIDGVPPAELFAQIERDVLTPLPPRRFERVTYHVG 336 Query 241 TVGVDTHLKVGKALYSVPWRLIGQRLHARTAGDVVQIFAGNDVVATHVRRPSGRSTDFSH 300 V D H+K G ALYSVPWRLIG + RT GD+VQ+FA + VVATHV SGR+T+ H Sbjct 337 KVAPDCHVKAGTALYSVPWRLIGSHVRVRTCGDMVQVFADDQVVATHVLHLSGRATNLEH 396 Query 301 YPPEKIAFHMRTPTWCRHTAELVGPASQQVIAEFMRDNAIHHLRSAQGVLGLRDKHGCDR 360 YPP K+A+H R WCR AE +G + V+AE NAIH LR+ Q ++GLR K+ DR Sbjct 397 YPPHKVAYHSRPVAWCRKQAEEIGEHAVAVVAELSEVNAIHRLRAIQSIVGLRTKYPDDR 456 Query 361 LEAACARAIEVGDPSYRTIKGILVAGTEHAANEPTTSSPAS 401 + AACARAI VGD RTIKGIL+AGTE+ ++ T+SP + Sbjct 457 INAACARAIAVGDVGPRTIKGILIAGTEY--DDTITTSPVA 495 >gi|262200055|ref|YP_003271263.1| integrase catalytic domain-containing protein [Gordonia bronchialis DSM 43247] gi|262083402|gb|ACY19370.1| Integrase catalytic region [Gordonia bronchialis DSM 43247] Length=523 Score = 496 bits (1277), Expect = 3e-138, Method: Compositional matrix adjust. Identities = 236/389 (61%), Positives = 289/389 (75%), Gaps = 0/389 (0%) Query 1 VATIAQRLRDDHGVAASESSVRRWIATHFAEEVARERVTVPRGPVDAGSEAQIDYGRLGM 60 VATIAQRLRDDHGV SESSVRR++ HFA+++ +R T PR PV AG EAQ+DYG+LGM Sbjct 97 VATIAQRLRDDHGVDVSESSVRRYVTAHFADKINEKRATPPRPPVPAGEEAQVDYGKLGM 156 Query 61 WFDPATARRVAVWAFVMVLAFSRHLFVRPVIRMDQTAWCACHVAAFEFFDGVPARLVCDN 120 W +P T +RV+VWAF ++L+ SR LFV+PV++MDQT+WCA HV AFEFF GVP R+VCDN Sbjct 157 WTNPETGKRVSVWAFAIILSCSRWLFVQPVLKMDQTSWCASHVDAFEFFGGVPERIVCDN 216 Query 121 LRTGVDKPDLYDPQINRSYAELASHYATLVDPARARKPKDKPRVERPMTYVRDSFWKGRE 180 L+TGV KPDLYDPQINR+YAELAS Y L+DPARA PKDKPR+ERPM Y+RDSF+ GRE Sbjct 217 LKTGVSKPDLYDPQINRAYAELASFYEVLIDPARAFTPKDKPRIERPMPYIRDSFFTGRE 276 Query 181 FDSLAQMQQAAVTWSTEVAGLRYLRALEGAQPLRMFEAVEQQALIALPPRAFELTSWSIG 240 F SL QMQQAA+ W V G R ++G P +F +E+ L LPPR FE ++ +G Sbjct 277 FTSLPQMQQAALDWCLNVYGRHAHRGIDGVPPAELFAQIERDVLTPLPPRRFERVTYHVG 336 Query 241 TVGVDTHLKVGKALYSVPWRLIGQRLHARTAGDVVQIFAGNDVVATHVRRPSGRSTDFSH 300 V D H+K G ALYSVPWRLIG + RT GD+VQ+FA + VVATHV SGR+T+ H Sbjct 337 KVAPDCHVKAGTALYSVPWRLIGSHVRVRTCGDMVQVFADDQVVATHVLHLSGRATNLEH 396 Query 301 YPPEKIAFHMRTPTWCRHTAELVGPASQQVIAEFMRDNAIHHLRSAQGVLGLRDKHGCDR 360 YPP K+A+H R WCR AE +G + V+AE NAIH LR+ Q ++GLR K+ DR Sbjct 397 YPPHKVAYHSRPVAWCRKQAEEIGEHAVAVVAELSEVNAIHRLRAIQSIVGLRTKYPDDR 456 Query 361 LEAACARAIEVGDPSYRTIKGILVAGTEH 389 + AACARAI VGD RTIKGIL+AGTE+ Sbjct 457 INAACARAIAVGDVGPRTIKGILIAGTEY 485 >gi|331697056|ref|YP_004333295.1| Integrase catalytic region [Pseudonocardia dioxanivorans CB1190] gi|326951745|gb|AEA25442.1| Integrase catalytic region [Pseudonocardia dioxanivorans CB1190] Length=553 Score = 491 bits (1265), Expect = 6e-137, Method: Compositional matrix adjust. Identities = 248/390 (64%), Positives = 289/390 (75%), Gaps = 2/390 (0%) Query 1 VATIAQRLRDDHGVAASESSVRRWIATHFAEEVARERVTVPR-GPVDAGSEAQIDYGRLG 59 VATI QRLRD+ G+ AS +S+RRW+ + EE R++V V R V GSE Q+DYG+LG Sbjct 96 VATIHQRLRDERGLEASVASLRRWVRANLPEESRRQQVRVLRPDDVVPGSEGQVDYGKLG 155 Query 60 MWFDPATARRVAVWAFVMVLAFSRHLFVRPVIRMDQTAWCACHVAAFEFFDGVPARLVCD 119 MW DP + RR AVWAFV+VLA SRH+FVRPV+ MDQ W HV AF FFDG PARLV D Sbjct 156 MWIDPQSGRRRAVWAFVLVLACSRHMFVRPVLTMDQREWTRAHVDAFAFFDGAPARLVPD 215 Query 120 NLRTGVDKPDLYDPQINRSYAELASHYATLVDPARARKPKDKPRVERPMTYVRDSFWKGR 179 NL+TGVD+PDLYDP +NRSY ELA HY L+DPAR+RKP+DK RVERPM YVRDSFW+GR Sbjct 216 NLKTGVDRPDLYDPLLNRSYGELAEHYGVLIDPARSRKPRDKARVERPMPYVRDSFWRGR 275 Query 180 EFDSLAQMQQAAVTWSTEVAGLRYLRALEGAQPLRMFEAVEQQALIALPPRAFELTSWSI 239 EF SLAQMQ AA+ W EVAG R R L+GA P +F AVEQ AL+ LP FEL SWS Sbjct 276 EFASLAQMQAAALRWCVEVAGTRACRPLDGAAPGAVFAAVEQPALLPLPRSEFELASWSR 335 Query 240 GTVGVDTHLKVG-KALYSVPWRLIGQRLHARTAGDVVQIFAGNDVVATHVRRPSGRSTDF 298 VG D H+KVG K LYSVPWRLIG+ + R VQIF +V THV +P GR TD Sbjct 336 PKVGPDIHVKVGKKTLYSVPWRLIGEHVDVRETPTTVQIFHDGVLVKTHVTKPWGRQTDT 395 Query 299 SHYPPEKIAFHMRTPTWCRHTAELVGPASQQVIAEFMRDNAIHHLRSAQGVLGLRDKHGC 358 + YPPEKIAFHMRTPTWCR A VG A +V+ E + NA+ LR+AQGVLGL D++G Sbjct 396 ADYPPEKIAFHMRTPTWCRDRAAEVGDACTRVVDELLEVNALFRLRAAQGVLGLADRYGP 455 Query 359 DRLEAACARAIEVGDPSYRTIKGILVAGTE 388 RLEAACARA+EVGDP+YRT+KGIL AGTE Sbjct 456 ARLEAACARAVEVGDPTYRTVKGILAAGTE 485 >gi|256393041|ref|YP_003114605.1| integrase catalytic region [Catenulispora acidiphila DSM 44928] gi|256359267|gb|ACU72764.1| Integrase catalytic region [Catenulispora acidiphila DSM 44928] Length=531 Score = 479 bits (1234), Expect = 3e-133, Method: Compositional matrix adjust. Identities = 234/403 (59%), Positives = 290/403 (72%), Gaps = 1/403 (0%) Query 1 VATIAQRLRDDHGVAASESSVRRWIATHFAEEVARERVTVPRGPVDAGSEAQIDYGRLGM 60 ++TI QRLRD+ G+ S ++ RRW+ E+ R +VTV R V+ GSEAQIDYG LG Sbjct 95 MSTIHQRLRDERGLTVSVATFRRWVHATMPEQADRAKVTVLRDEVEPGSEAQIDYGFLGQ 154 Query 61 WFDPATARRVAVWAFVMVLAFSRHLFVRPVIRMDQTAWCACHVAAFEFFDGVPARLVCDN 120 W +P + +R VWAFVMVL SRH+FVRPV+ MDQ +W HVAAFEFF GVP RL+ DN Sbjct 155 WTNPRSGKRHRVWAFVMVLPCSRHMFVRPVLSMDQHSWTEAHVAAFEFFGGVPKRLIPDN 214 Query 121 LRTGVDKPDLYDPQINRSYAELASHYATLVDPARARKPKDKPRVERPMTYVRDSFWKGRE 180 L+TGVDKPDLYDP+INR+YAELA+HY LVDPARA KPKDKPRVER M Y+RDS+W GRE Sbjct 215 LKTGVDKPDLYDPKINRAYAELAAHYGALVDPARAVKPKDKPRVERQMPYIRDSWWAGRE 274 Query 181 FDSLAQMQQAAVTWSTEVAGLRYLRALEGAQPLRMFEAVEQQALIALPPRAFELTSWSIG 240 F S+ QMQ AV WST VAG R R L GA P+ +FEA E Q L+ LP +F L WS Sbjct 275 FASIEQMQADAVAWSTTVAGRRACRPLGGASPISVFEAAEAQILLPLPQASFTLARWSTA 334 Query 241 TVGVDTHLKVGKALYSVPWRLIGQRLHARTAGDVVQIFAGNDVVATHVRRPSGRSTDFSH 300 TVG D H++VG+ LYSVPW+LIG+R+ R+ +VQ+F ++V TH G+ TD + Sbjct 335 TVGPDIHIRVGRTLYSVPWKLIGRRVDVRSTATMVQVFLDGEMVKTHAALEQGKRTDKND 394 Query 301 YPPEKIAFHMRTPTWCRHTAELVGPASQQVIAEFMRDNAIHHLRSAQGVLGLRDKHGCDR 360 YPPEKIAF MRTP WCR A VG A ++++ + NA++ LR+AQGV+GLR K+G R Sbjct 395 YPPEKIAFQMRTPVWCRTQASEVGDACRELVDGLLEVNALYRLRAAQGVVGLRKKYGDQR 454 Query 361 LEAACARAIEVGDPSYRTIKGILVAGTEHAANEPTTSSPASTA 403 LEAACA+AI VGDPSYRT+KG+L+AGTE EP T + A Sbjct 455 LEAACAKAITVGDPSYRTVKGVLIAGTE-TDPEPETGDAGAAA 496 >gi|331693914|ref|YP_004330153.1| Integrase catalytic region [Pseudonocardia dioxanivorans CB1190] gi|326948603|gb|AEA22300.1| Integrase catalytic region [Pseudonocardia dioxanivorans CB1190] Length=581 Score = 478 bits (1229), Expect = 1e-132, Method: Compositional matrix adjust. Identities = 252/409 (62%), Positives = 283/409 (70%), Gaps = 7/409 (1%) Query 2 ATIAQRLRDDHGVAASESSVRRWIATHFAEEVARERVTVPRGPVDAGSEAQIDYGRLGMW 61 ATI QRLRD+HGVAAS +S++RWIA ++ RERVTV R G+EAQIDYG LG W Sbjct 97 ATIWQRLRDEHGVAASAASLKRWIAATLPDQGVRERVTVLREDPPPGAEAQIDYGFLGSW 156 Query 62 FDPATARRVAVWAFVMVLAFSRHLFVRPVIRMDQTAWCACHVAAFEFFDGVPARLVCDNL 121 DP RR VWAFVMVL+FSRH+FVRPV+ MDQ AW A HVAAFEFF GVP RLV DNL Sbjct 157 TDPVGGRRRRVWAFVMVLSFSRHVFVRPVLTMDQHAWTAAHVAAFEFFGGVPVRLVPDNL 216 Query 122 RTGVDKPDLYDPQINRSYAELASHYATLVDPARARKPKDKPRVERPMTYVRDSFWKGREF 181 RTGVD+ DLYDP++NRSYAELA HY TL+DPARARKPKDKPRVER M YVRDSFW+GR F Sbjct 217 RTGVDRADLYDPKLNRSYAELAEHYGTLIDPARARKPKDKPRVERQMPYVRDSFWRGRVF 276 Query 182 DSLAQMQQAAVTWSTEVAGLRYLRALEGAQPLRMFEAVEQQALIALPPRAFELTSWSIGT 241 SL QMQ A W EVA R R L GAQP +F A E L LP F L WS T Sbjct 277 GSLEQMQAEAEHWCREVAARRQCRPLGGAQPGAVFAAAEADELNPLPRTQFVLARWSSAT 336 Query 242 VGVDTHLKVGKALYSVPWRLIGQRLHARTAGDVVQIFA-----GNDVVATHVRRPSGR-- 294 VG D H+KVGKALYSVPWR IGQR+ AR VQIFA G+ ++ATH S R Sbjct 337 VGPDIHVKVGKALYSVPWRHIGQRVDARATATSVQIFARGDDGGSQLIATHPVSTSARLK 396 Query 295 STDFSHYPPEKIAFHMRTPTWCRHTAELVGPASQQVIAEFMRDNAIHHLRSAQGVLGLRD 354 TD +HYPPEKIAF MRTP WCR A +G + VIAE + NA+ LR+AQGVLGL D Sbjct 397 RTDLAHYPPEKIAFRMRTPVWCRTRAAEIGENTTAVIAELLAVNALFRLRAAQGVLGLAD 456 Query 355 KHGCDRLEAACARAIEVGDPSYRTIKGILVAGTEHAANEPTTSSPASTA 403 KHG RLE A +A+ GDPSYRTI+GIL AG E P T + A Sbjct 457 KHGPARLERAAGKALAAGDPSYRTIRGILAAGLEAEPAPPPTGDGGAAA 505 >gi|85859557|ref|YP_461759.1| transposase [Syntrophus aciditrophicus SB] gi|85722648|gb|ABC77591.1| transposase [Syntrophus aciditrophicus SB] Length=526 Score = 268 bits (684), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 138/351 (40%), Positives = 203/351 (58%), Gaps = 3/351 (0%) Query 38 VTVPRGPVDAGSEAQIDYGRLGMWFDPATARRVAVWAFVMVLAFSRHLFVRPVIRMDQTA 97 V R V+ GS+AQ+D+G GM + R WAF+MVL++SRH +VR V MD Sbjct 140 VVTVRIEVEPGSQAQVDFGSAGMMREAPGGRLRKAWAFIMVLSYSRHRYVRFVFHMDVRT 199 Query 98 WCACHVAAFEFFDGVPARLVCDNLRTGVDKPDLYDPQINRSYAELASHYATLVDPARARK 157 W CH AF FF+G PA +V DNL++GV KPD+YDP +NR+YAE+ HY + DPA+ R+ Sbjct 200 WIDCHERAFAFFNGCPATVVLDNLKSGVIKPDIYDPTLNRAYAEMERHYGFVADPAKVRE 259 Query 158 PKDKPRVERPMTYVRDSFWKGREFDSLAQMQQAAVTWSTEVAGLRYLRALEGAQPLRMFE 217 K K +VER + VR GR+F + + + A+ W E G++ + +P +F+ Sbjct 260 AKHKGKVERLVPVVRGQLLAGRDFRDIEEANEKALLWCKEQIGMQ-IHGTTKRRPFEVFQ 318 Query 218 AVEQQALIALPPRAFELTSWSIGTVGVDTHLKVGKALYSVPWRLIGQRLHARTAGDVVQI 277 E L ALP AF++ W TV D H+ ++ YS+P R IG+++ R V + Sbjct 319 NEEASCLKALPAEAFDIPLWKACTVHPDHHVVFDRSYYSLPTRFIGRQVWVRGGCRQVHV 378 Query 278 FAGNDVVATHVRR--PSGRSTDFSHYPPEKIAFHMRTPTWCRHTAELVGPASQQVIAEFM 335 F ++ TH R P TD S YPP+K+A+ M PT+CR A +GP ++ ++ + Sbjct 379 FLDGQLIKTHNRSFVPGTFVTDQSDYPPDKLAYLMAAPTYCRGQAAQIGPQTEALVRSIL 438 Query 336 RDNAIHHLRSAQGVLGLRDKHGCDRLEAACARAIEVGDPSYRTIKGILVAG 386 D+A+ +LR AQ VL L K+G +E+A R++ G+ YR+IK IL G Sbjct 439 GDHAMRNLRKAQAVLRLAKKYGSAAMESAAERSLFFGNFRYRSIKAILENG 489 >gi|258404768|ref|YP_003197510.1| Integrase catalytic region [Desulfohalobium retbaense DSM 5692] gi|257796995|gb|ACV67932.1| Integrase catalytic region [Desulfohalobium retbaense DSM 5692] Length=504 Score = 267 bits (682), Expect = 3e-69, Method: Compositional matrix adjust. Identities = 152/414 (37%), Positives = 214/414 (52%), Gaps = 10/414 (2%) Query 2 ATIAQRLRDDHGVAASESSVRRWIATHFAEEVARERVTVPRGPVDAGSEAQIDYGRLGMW 61 +TI LR DHG + S VRR++ T +E T R G AQ+D+G+ + Sbjct 90 STIHNALRRDHGFTGAYSCVRRYLKT----LKNKEPKTTVRLIFKPGESAQVDFGKGPDF 145 Query 62 FDPATARRVAVWAFVMVLAFSRHLFVRPVIRMDQTAWCACHVAAFEFFDGVPARLVCDNL 121 DP T V W FVM LA+SRH++ V W CH AFEFF+GVP ++ DNL Sbjct 146 NDPHTGSPVKSWIFVMTLAWSRHMYAEIVPDQTIETWLGCHRRAFEFFNGVPTQVRIDNL 205 Query 122 RTGVDKPDLYDPQINRSYAELASHYATLVDPARARKPKDKPRVERPMTYVRDSFWKGREF 181 ++ + Y+P++ RSY +LA Y +DP + P+ K RVE + YV+++F R Sbjct 206 KSAITSASYYEPKVQRSYEDLALGYGFKIDPCPVQDPQKKGRVESGVKYVKNTFVPLRRH 265 Query 182 DSLAQMQQAAVTWSTEVAGLRYLRALEGAQPLRMFEAVEQQALIALPPRAFELTSWSIGT 241 S+A+ + + W +VAG R + +PL FE E+ L LP A EL W Sbjct 266 RSMAESNRQLLVWIMDVAGNR-IHGTTHEKPLERFEHTERFVLQPLPAIAPELAVWQQCK 324 Query 242 VGVDTHLKVGKALYSVPWRLIGQRLHARTAGDVVQIFAGNDVVATHVR--RPSGRSTDFS 299 + D H+ + K YS P+ Q L +T V I+ + +VA H R +P +ST+ Sbjct 325 LHGDCHICLKKCFYSAPYIYANQTLWVKTLEKTVAIYKDHQLVAAHPRLFKPGQQSTNKD 384 Query 300 HYPPEKIAFHMRTPTWCRHTAELVGPASQQVIAEFMRDNAIHHLRSAQGVLGLRDKHGCD 359 HYPPE A+ MR P WC AE +GP+ + VI D +H+LR+AQG++ L+ +G Sbjct 385 HYPPEAQAYLMRDPQWCVAQAEKIGPSCRAVIDALFADRVLHNLRAAQGLISLKKAYGAK 444 Query 360 RLEAACARAIEVGDPSYRTIKGILVAGTEHAANEPTTSSPAS---TAGGVPARP 410 LE AC RA+ P+YRT+K IL G E E T P T G RP Sbjct 445 SLELACKRAVAYLSPTYRTVKSILKQGLEQEPIETQTQLPLDEVYTGKGKHTRP 498 >gi|297568317|ref|YP_003689661.1| Integrase catalytic region [Desulfurivibrio alkaliphilus AHT2] gi|297569704|ref|YP_003691048.1| Integrase catalytic region [Desulfurivibrio alkaliphilus AHT2] gi|297569969|ref|YP_003691313.1| Integrase catalytic region [Desulfurivibrio alkaliphilus AHT2] 7 more sequence titles Length=509 Score = 263 bits (671), Expect = 6e-68, Method: Compositional matrix adjust. Identities = 154/409 (38%), Positives = 214/409 (53%), Gaps = 12/409 (2%) Query 3 TIAQRLRDDHGVAASESSVRRWIATHFAEEVARERVTVPRGPVDAGSEAQIDYGRLGMWF 62 T+ Q L +HG S SSVRR++ T E+ + V + P G AQ+D+G Sbjct 99 TMYQALVREHGFTGSYSSVRRFLKT-LKEDNPQATVMLDFAP---GEAAQVDFGSGPKLL 154 Query 63 DPATARRVAVWAFVMVLAFSRHLFVRPVIRMDQTAWCACHVAAFEFFDGVPARLVCDNLR 122 D T + + W FVM LAFSRH + V W CH AFEFF GVPA+++ DNL+ Sbjct 155 DSQTGKPFSTWVFVMTLAFSRHQYAEIVRDQKVATWLGCHRRAFEFFGGVPAKVMIDNLK 214 Query 123 TGVDKPDLYDPQINRSYAELASHYATLVDPARARKPKDKPRVERPMTYVRDSFWKGREFD 182 G+ K +DP +NRSYAE A Y L+ P R+P+ K RVE + YV+++F REF Sbjct 215 AGIIKACWHDPAVNRSYAEFAEGYGFLISPCPPRQPQMKGRVESGVKYVKNNFLPLREFR 274 Query 183 SLAQMQQAAVTWSTEVAGLRYLRALEGAQPLRMFEAVEQQALIALPPRAFELTSWSIGTV 242 SL + W AG R +PL MF E+ L LP A EL W+ + Sbjct 275 SLVDANRQLKEWVLATAGNRS-HGTTKQKPLVMFAEAEKAFLKPLPAVAPELAVWAEHKL 333 Query 243 GVDTHLKVGKALYSVPWRLIGQRLHARTAGDVVQIFAGNDVVATHVR--RPSGRSTDFSH 300 + HL+ KA YS P++L+ ++L + V+I+ + VA H R RP ++T H Sbjct 334 HGNCHLQFDKAYYSAPFKLVHKKLWVKATETTVKIYHQHQQVAVHPRCARPGQKATCVDH 393 Query 301 YPPEKIAFHMRTPTWCRHTAELVGPASQQVIAEFMRDNAIHHLRSAQGVLGLRDKHGCDR 360 PP+ +A+ MR P WC A +GP ++ + + HLR+AQGVL L K+G +R Sbjct 394 LPPDAVAYLMRDPQWCLKQAGEIGPRCHHLVKRLLSHRVVDHLRAAQGVLRLAGKYGPER 453 Query 361 LEAACARAIEVGDPSYRTIKGILVAGTEHAANEPTTSSPASTAGGVPAR 409 LEAAC RA+ P Y T+K IL G + +P + P A GV R Sbjct 454 LEAACHRALIYDSPQYITVKTILGKGLD---QQPPETEP--VAAGVAYR 497 >gi|161318461|gb|ABU68843.2| IstA [Thauera butanivorans] Length=508 Score = 247 bits (631), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 154/398 (39%), Positives = 201/398 (51%), Gaps = 7/398 (1%) Query 4 IAQRLRDDHGVAASESSVRRWIATHFAEEVARERVTVPRGPVDAGSEAQIDYGRLGMWFD 63 I L+ +HG + SSVRR IA E+ V + P G AQ+D+G D Sbjct 93 IHTTLKREHGFSGHYSSVRRLIAQIGREQPPEATVRLTFAP---GEAAQVDFGAGPHLVD 149 Query 64 PATARRVAVWAFVMVLAFSRHLFVRPVIRMDQTAWCACHVAAFEFFDGVPARLVCDNLRT 123 PAT WAFVM L FSRH +V V W CH AFE+F VPARL+ DN + Sbjct 150 PATGEIRRTWAFVMTLCFSRHQYVEFVWDQSVRTWLGCHRRAFEWFGAVPARLIIDNAKC 209 Query 124 GVDKPDLYDPQINRSYAELASHYATLVDPARARKPKDKPRVERPMTYVRDSFWKGREFDS 183 + + ++DPQ+ R+YAE A Y +D P+ K VE + YV+ +F R F Sbjct 210 AITRACMHDPQVQRAYAECAEGYGFRIDACPPHDPQKKGIVEAGVKYVKGNFLPTRSFRD 269 Query 184 LAQMQQAAVTWSTEVAGLRYLRALEGAQPLRMFEAVEQQALIALPPRAFELTSWSIGTVG 243 LA + A W + AGLR + +PL F AVE+ L+ LP +L +W TV Sbjct 270 LADLNAQAREWVLKEAGLR-IHGTTRVRPLDTF-AVERSTLLPLPEVPPDLGTWHSVTVH 327 Query 244 VDTHLKVGKALYSVPWRLIGQRLHARTAGDVVQIFAGNDVVATH--VRRPSGRSTDFSHY 301 D H+ +ALYSVP+ L+G+ L R VV ++ VATH RRP R T H Sbjct 328 RDCHVSFERALYSVPFALVGKALWLRATDAVVTVYHDFKPVATHARARRPGERRTVSDHL 387 Query 302 PPEKIAFHMRTPTWCRHTAELVGPASQQVIAEFMRDNAIHHLRSAQGVLGLRDKHGCDRL 361 PP F +WC A +G A Q+I + + D LR+AQGVL L+D +G RL Sbjct 388 PPAAQRFFAHDRSWCLQQAREIGDACAQLIGQLLSDRISERLRAAQGVLALKDPYGAARL 447 Query 362 EAACARAIEVGDPSYRTIKGILVAGTEHAANEPTTSSP 399 EAAC RAI P YRT+K IL G + A T P Sbjct 448 EAACERAIAHDSPHYRTVKTILAGGHDLAPVSTITPEP 485 >gi|239907547|ref|YP_002954288.1| putative transposase orfA for insertion sequence element [Desulfovibrio magneticus RS-1] gi|239797413|dbj|BAH76402.1| putative transposase orfA for insertion sequence element [Desulfovibrio magneticus RS-1] Length=511 Score = 240 bits (613), Expect = 3e-61, Method: Compositional matrix adjust. Identities = 146/389 (38%), Positives = 194/389 (50%), Gaps = 7/389 (1%) Query 2 ATIAQRLRDDHGVAASESSVRRWIATHFAEEVARERVTVPRGPVDAGSEAQIDYGRLGMW 61 TI Q L HG + SSVRR+IA E V + P DA Q+D+G Sbjct 98 CTIHQALIRKHGFTGAYSSVRRFIAK-IKEVTPAATVMLDFAPGDA---VQVDFGAGPEI 153 Query 62 FDPATARRVAVWAFVMVLAFSRHLFVRPVIRMDQTAWCACHVAAFEFFDGVPARLVCDNL 121 D T + FVM LA+SRH + V W CH AFEFF GVPAR++ DN Sbjct 154 TDAFTGEVIKTHFFVMTLAWSRHQYAEIVRDQKIETWLGCHRRAFEFFGGVPARVIIDNP 213 Query 122 RTGVDKPDLYDPQINRSYAELASHYATLVDPARARKPKDKPRVERPMTYVRDSFWKGREF 181 + + K +DP + RSYAE A Y LV P R P+ K RVE + Y++++F R+F Sbjct 214 KCAITKACYHDPVVQRSYAEFAESYGFLVSPCPPRDPQKKGRVEAGVKYIKNNFMPLRDF 273 Query 182 DSLAQMQQAAVTWSTEVAGLRYLRALEGAQPLRMFEAVEQQALIALPPRAFELTSWSIGT 241 SL + W AG R QPL MF E+ L +LP EL W Sbjct 274 RSLRDANDQLLDWVMSTAGNRN-HGTTKEQPLAMFVETEKHVLRSLPDVPTELAIWGKVK 332 Query 242 VGVDTHLKVGKALYSVPWRLIGQRLHARTAGDVVQIFAGNDVVATHVR--RPSGRSTDFS 299 + + H++ + YS P+RL+ Q L R VQIF N++VA H R RP +ST Sbjct 333 LHGNCHVEFRRCYYSAPYRLVHQFLWLRATEKTVQIFYDNELVAIHPRLSRPGSKSTVQE 392 Query 300 HYPPEKIAFHMRTPTWCRHTAELVGPASQQVIAEFMRDNAIHHLRSAQGVLGLRDKHGCD 359 H PPE A++M P WC +E VG A ++ I + +LR+AQ L + K+G Sbjct 393 HLPPEAQAYNMHDPQWCLRQSEKVGIACREFIDALFAHKVLDNLRAAQATLTFKKKYGAK 452 Query 360 RLEAACARAIEVGDPSYRTIKGILVAGTE 388 RLEAAC RA++ P Y T+K IL G + Sbjct 453 RLEAACRRALDHHAPHYNTVKRILEKGLD 481 >gi|283853953|ref|ZP_06371154.1| Integrase catalytic region [Desulfovibrio sp. FW1012B] gi|283570656|gb|EFC18715.1| Integrase catalytic region [Desulfovibrio sp. FW1012B] Length=511 Score = 236 bits (601), Expect = 7e-60, Method: Compositional matrix adjust. Identities = 145/389 (38%), Positives = 196/389 (51%), Gaps = 7/389 (1%) Query 2 ATIAQRLRDDHGVAASESSVRRWIATHFAEEVARERVTVPRGPVDAGSEAQIDYGRLGMW 61 TI Q L +G + SSVRR+IA E V + P DA Q+D+G Sbjct 98 CTIHQALIRKYGFTGAYSSVRRFIAK-IKEVTPVATVMLDFAPGDA---VQVDFGAGPEI 153 Query 62 FDPATARRVAVWAFVMVLAFSRHLFVRPVIRMDQTAWCACHVAAFEFFDGVPARLVCDNL 121 D T + FVM LA+SRH + V W CH AFEFF GVPAR++ DN Sbjct 154 TDAFTGEVIKTHFFVMTLAWSRHQYAEIVRDQKIETWLGCHRRAFEFFGGVPARVIIDNP 213 Query 122 RTGVDKPDLYDPQINRSYAELASHYATLVDPARARKPKDKPRVERPMTYVRDSFWKGREF 181 + + K +DP++ RSYA A LV P R P+ K RVE + Y++++F R+F Sbjct 214 KCAITKACYHDPEVQRSYAAFAEGCDFLVSPCPPRDPQKKGRVESGVKYIKNNFMPLRDF 273 Query 182 DSLAQMQQAAVTWSTEVAGLRYLRALEGAQPLRMFEAVEQQALIALPPRAFELTSWSIGT 241 SL + W +AG R + QPL +F E+ L LP EL W+ Sbjct 274 RSLRDANEQLRDWVMGIAGNR-IHGTTKEQPLALFAETEKHILRPLPDVPLELAVWAKVK 332 Query 242 VGVDTHLKVGKALYSVPWRLIGQRLHARTAGDVVQIFAGNDVVATHVR--RPSGRSTDFS 299 + + H++ + YS P RL+ Q L R VQIF N++VA H R RP ++T Sbjct 333 LHGNCHVEFRRCYYSAPHRLVRQTLWLRATETTVQIFHDNELVAIHSRLSRPGSKATVQE 392 Query 300 HYPPEKIAFHMRTPTWCRHTAELVGPASQQVIAEFMRDNAIHHLRSAQGVLGLRDKHGCD 359 H PPE A+ M P WC AE VG A ++ I + +LR+AQG L L+ K+G Sbjct 393 HQPPEAQAYIMHDPQWCLAQAEKVGLACRECIDALFAHKVLDNLRAAQGTLQLKKKYGAK 452 Query 360 RLEAACARAIEVGDPSYRTIKGILVAGTE 388 RLEAAC RA++ DP Y T+K IL G + Sbjct 453 RLEAACRRAMDHHDPRYNTVKRILEKGLD 481 >gi|91784014|ref|YP_559220.1| putative transposase catalytic subunit [Burkholderia xenovorans LB400] gi|91687968|gb|ABE31168.1| Putative transposase catalytic subunit [Burkholderia xenovorans LB400] Length=507 Score = 235 bits (600), Expect = 9e-60, Method: Compositional matrix adjust. Identities = 145/402 (37%), Positives = 200/402 (50%), Gaps = 6/402 (1%) Query 3 TIAQRLRDDHGVAASESSVRRWIATHFAEEVARERVTVPRGPVDAGSEAQIDYGRLGMWF 62 TI L +HG S SSV R++ A + + P +A AQ+D+G M Sbjct 94 TIHATLVRNHGYGGSYSSVYRFLLHIDASHTPDVPLRLEFKPAEA---AQVDFGAGPMMT 150 Query 63 DPATARRVAVWAFVMVLAFSRHLFVRPVIRMDQTAWCACHVAAFEFFDGVPARLVCDNLR 122 D T W FVM LA+SRH +V V W CH AFE F GVPAR++ DN + Sbjct 151 DALTGEIHKTWFFVMTLAWSRHQYVEFVRDQTVATWLGCHRRAFEAFGGVPARVIIDNCK 210 Query 123 TGVDKPDLYDPQINRSYAELASHYATLVDPARARKPKDKPRVERPMTYVRDSFWKGREFD 182 + + Y+P++ R+Y E A Y +D R P+ K VE + +V+ SF R+F Sbjct 211 CAITRACYYEPEVQRAYGECAEGYGFKIDACPPRDPQKKGIVESGVKFVKRSFLPLRDFR 270 Query 183 SLAQMQQAAVTWSTEVAGLRYLRALEGAQPLRMFEAVEQQALIALPPRAFELTSWSIGTV 242 LA + W AG R + PLR F VE+ LI+LP EL W+ V Sbjct 271 GLADANRQVHAWVMNEAGNR-IHGTTREMPLRRFAEVERSLLISLPDVPPELAVWAKTKV 329 Query 243 GVDTHLKVGKALYSVPWRLIGQRLHARTAGDVVQIFAGNDVVATHVR--RPSGRSTDFSH 300 D H++ ++ YSVP+RL+GQ L + +V ++ G D VA HVR R GR T H Sbjct 330 HRDAHVQFEQSFYSVPYRLVGQELWLKATDTMVTLYRGQDSVAAHVRLTRAGGRRTVDDH 389 Query 301 YPPEKIAFHMRTPTWCRHTAELVGPASQQVIAEFMRDNAIHHLRSAQGVLGLRDKHGCDR 360 P A+ ++ WC TAE +GPA ++ D + +RS QGVL L++K+G R Sbjct 390 LPSAAQAWQLQDTQWCLATAEQIGPACYALVHALFGDKVLIKMRSVQGVLRLKEKYGAVR 449 Query 361 LEAACARAIEVGDPSYRTIKGILVAGTEHAANEPTTSSPAST 402 LEAAC+RA G P Y +K IL G + + AST Sbjct 450 LEAACSRANHYGTPHYTAVKTILQKGLDQLTLLNAFDALAST 491 >gi|187921171|ref|YP_001890203.1| integrase catalytic subunit [Burkholderia phytofirmans PsJN] gi|187922213|ref|YP_001893855.1| integrase [Burkholderia phytofirmans PsJN] gi|187713407|gb|ACD14631.1| Integrase catalytic region [Burkholderia phytofirmans PsJN] gi|187719609|gb|ACD20832.1| Integrase catalytic region [Burkholderia phytofirmans PsJN] Length=512 Score = 234 bits (597), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 149/401 (38%), Positives = 205/401 (52%), Gaps = 11/401 (2%) Query 3 TIAQRLRDDHGVAASESSVRRWIATHFAEEVARERVTVPRGPVDAGSEAQIDYGRLGMWF 62 TI L+ +HG S S+VRR++ AE + P DA AQ+D+G G Sbjct 100 TIHSALKRNHGYTGSYSAVRRFLKHLGAERNVTATTILDFPPADA---AQVDFG-AGPAL 155 Query 63 DPATARRVAVWAFVMVLAFSRHLFVRPVIRMDQTAWCACHVAAFEFFDGVPARLVCDNLR 122 + + W FVM L +SRH +V V W ACH AFE+F G P R++ DN + Sbjct 156 IHESGHTLKTWFFVMTLCWSRHQYVELVFDQTIETWLACHRRAFEWFGGCPGRIIIDNAK 215 Query 123 TGVDKPDLYDPQINRSYAELASHYATLVDPARARKPKDKPRVERPMTYVRDSFWKGREFD 182 + + YDP++ RSYA LA Y +D P+ K VE + YV+ SF R F Sbjct 216 CAIIRACTYDPEVQRSYAGLAEGYGFRIDACPPHDPQKKGVVESGVKYVKKSFMPLRAFR 275 Query 183 SLAQMQQAAVTWSTEVAGLRYLRALEGAQPLRMFEAVEQQALIALPPRAFELTSWSIGTV 242 L + W A +R QPL F A+E+ L ALP L +WS TV Sbjct 276 DLPDANRQLREWIMREASVRE-HGTTREQPLARF-AIEKPLLTALPDVPPVLAAWSTVTV 333 Query 243 GVDTHLKVGKALYSVPWRLIGQRLHARTAGDVVQIFAGNDVVATH--VRRPSGRSTDFSH 300 D H++ KALYSVP+ L+G+ L ++ VVQ+F +++VATH +R+P RST H Sbjct 334 HRDAHIQHHKALYSVPFALVGKTLWVKSTDTVVQLFHQHELVATHPRLRKPGARSTVRDH 393 Query 301 YPPEKIAFHMRTPTWCRHTAELVGPASQQVIAEFMRDNAIHHLRSAQGVLGLRDKHGCDR 360 PP A+ P WC A+ +GPA +I D + +LR AQG++ LR K G R Sbjct 394 QPPAAQAWLEHDPQWCLAQAKEIGPACHALILALFNDEVLVNLRGAQGIVRLRGKVGDAR 453 Query 361 LEAACARAIEVGDPSYRTIKGILVAGTEHAANEPTTSSPAS 401 L+AAC RA+ P +RT+K IL G E +EP SP + Sbjct 454 LDAACERALAHASPRWRTVKTILDKGLE---SEPIAESPQT 491 >gi|56475550|ref|YP_157139.1| transposase [Aromatoleum aromaticum EbN1] gi|56477566|ref|YP_159155.1| transposase [Aromatoleum aromaticum EbN1] gi|56311593|emb|CAI06238.1| transposase [Aromatoleum aromaticum EbN1] gi|56313609|emb|CAI08254.1| transposase [Aromatoleum aromaticum EbN1] Length=506 Score = 234 bits (597), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 144/394 (37%), Positives = 204/394 (52%), Gaps = 6/394 (1%) Query 11 DHGVAASESSVRRWIATHFAEEVARERVTVPRGPVDAGSEAQIDYGRLGMWFDPATARRV 70 +HG A S SSVRR + + + + + R +AG Q+D+G + D T Sbjct 100 NHGYAGSYSSVRRLLQS---IDASTPPASTCRLDFEAGEAGQVDFGAGPVMTDVMTGASF 156 Query 71 AVWAFVMVLAFSRHLFVRPVIRMDQTAWCACHVAAFEFFDGVPARLVCDNLRTGVDKPDL 130 W FVM LA+SRH +V V W ACH AF++F+GV AR++ DN + + + Sbjct 157 KTWFFVMTLAWSRHQYVEFVRDQTVETWLACHRNAFQWFNGVVARVIIDNPKCAITRACT 216 Query 131 YDPQINRSYAELASHYATLVDPARARKPKDKPRVERPMTYVRDSFWKGREFDSLAQMQQA 190 DPQ+ R+YAE A + + P P+ K VE + YV+ +F REF SLA + Sbjct 217 RDPQVQRAYAECAEGFGFRISPCPPADPRKKGIVESGVKYVKRNFLPLREFRSLADANRQ 276 Query 191 AVTWSTEVAGLRYLRALEGAQPLRMFEAVEQQALIALPPRAFELTSWSIGTVGVDTHLKV 250 W AG R +PL F +VE+ L+ LP L +W TV DTH+K Sbjct 277 VADWVMGEAGNR-CHGTTREKPLTRFASVEKALLLPLPTVPPVLATWVKVTVHPDTHVKF 335 Query 251 GKALYSVPWRLIGQRLHARTAGDVVQIFAGNDVVATH--VRRPSGRSTDFSHYPPEKIAF 308 G LYSVP+RL+GQ L R VQ+F + ++A+H ++ P RST H P E A+ Sbjct 336 GLCLYSVPFRLVGQELWLRATHTSVQVFHEHQLIASHPRLKDPGRRSTVRDHQPLEAQAY 395 Query 309 HMRTPTWCRHTAELVGPASQQVIAEFMRDNAIHHLRSAQGVLGLRDKHGCDRLEAACARA 368 +R P WC A +G A +I D + +LR+AQG++ L +G RLEAAC RA Sbjct 396 QLRDPQWCLEAATRIGSACAALIEALFADRVLDNLRAAQGIVRLAKTYGSARLEAACVRA 455 Query 369 IEVGDPSYRTIKGILVAGTEHAANEPTTSSPAST 402 + G P YRT+K IL G + A + + + A T Sbjct 456 LSFGSPRYRTVKTILAKGLDQQAAQSSFDALAET 489 >gi|291286208|ref|YP_003503024.1| integrase catalytic subunit [Denitrovibrio acetiphilus DSM 12809] gi|291286600|ref|YP_003503416.1| integrase catalytic subunit [Denitrovibrio acetiphilus DSM 12809] gi|291286635|ref|YP_003503451.1| integrase catalytic subunit [Denitrovibrio acetiphilus DSM 12809] 9 more sequence titles Length=513 Score = 232 bits (591), Expect = 1e-58, Method: Compositional matrix adjust. Identities = 131/361 (37%), Positives = 201/361 (56%), Gaps = 8/361 (2%) Query 12 HGVAASESSVRRWIATHFAEEVARERVTVPRGPVDA-GSEAQIDYGRLGMWFDPATARRV 70 HGV+ S ++RR++ E++ + R P A G A++D+GRLG+ +DP T RR Sbjct 105 HGVSVSYDTLRRYLH----EDLGFFKHNTVRMPETAPGEYAEVDFGRLGLLYDPETDRRR 160 Query 71 AVWAFVMVLAFSRHLFVRPVIRMDQTAWCACHVAAFEFFDGVPARLVCDNLRTGVDKPDL 130 V A ++ L +SR+ +V M +A+EFF GVPA+++ DN++T +DK D Sbjct 161 VVHALIVTLPYSRYQYVHLCHSMKFQEVITGLESAWEFFGGVPAKVIVDNMKTAIDKADR 220 Query 131 YDPQINRSYAELASHYATLVDPARARKPKDKPRVERPMTYVRDSFWKGREFDSLAQMQQA 190 YD Q NR + E A + ++DPARA PKDKP+VER ++YVRD+F+KG F SL+ Q+A Sbjct 221 YDAQFNRYFYEYACYRGFIIDPARAVAPKDKPKVERNVSYVRDNFFKGETFRSLSHAQEA 280 Query 191 AVTWSTEVAGLRYLRALEGAQPLRMFEAVEQQALIALPPRAFELTSWSIGTVGVDTHLKV 250 A W V+G+R + P +F+ EQ L+ L +++ W V D H+++ Sbjct 281 ADAWCRTVSGMR-IHGTTKKHPRIVFDMEEQANLLPLEQERYDVPFWGTCKVHPDHHIRI 339 Query 251 GKALYSVPWRLIGQRLHARTAGDVVQIFAGNDVVATHVRRPSG-RSTDFSHYPPEKIAFH 309 ALYSVP IG+ + R +V+I+ + H R G RSTD S YP EK + Sbjct 340 QSALYSVPTVYIGKEVSVRLDSKLVRIYHKEQQIKVHSRMKKGKRSTDTSDYPEEKRGYT 399 Query 310 MRTPTWCRHTAELVGPASQQVIAEFMR-DNAIHHLRSAQGVLGLRDKHGCDRLEAACARA 368 M++ + + A+ VG + + + D +LR AQ ++ DK+G R+E AC RA Sbjct 400 MKSCEYHIYKAKEVGFYCGEFMERLLSGDFPWQNLRQAQKLIRDADKYGHGRMEQACQRA 459 Query 369 I 369 + Sbjct 460 V 460 >gi|257091747|ref|YP_003165388.1| integrase catalytic subunit [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257091995|ref|YP_003165636.1| integrase catalytic subunit [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257093056|ref|YP_003166697.1| integrase catalytic subunit [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] 13 more sequence titles Length=508 Score = 231 bits (590), Expect = 1e-58, Method: Compositional matrix adjust. Identities = 145/415 (35%), Positives = 207/415 (50%), Gaps = 10/415 (2%) Query 1 VATIAQRLRDDHGVAASESSVRRWIATHFAEEVARERVTVPRGPVDAGSEAQIDYGRLGM 60 V++I Q L +G S +V R++ + E A V G +AQ+D+G + Sbjct 94 VSSIRQALARRYGYGGSVHAVYRFLRS----EAAPAPVATVMLDFAVGEQAQVDFGSGPL 149 Query 61 WFDPATARRVAVWAFVMVLAFSRHLFVRPVIRMDQTAWCACHVAAFEFFDGVPARLVCDN 120 D + W FVM L++SRH + V W ACH AFE+F+GVP ++ DN Sbjct 150 ITDRHSGEVFKTWFFVMTLSWSRHQYAEVVRNQSVETWLACHRHAFEWFNGVPRKVRIDN 209 Query 121 LRTGVDKPDLYDPQINRSYAELASHYATLVDPARARKPKDKPRVERPMTYVRDSFWKGRE 180 + + + Y+P + R+YAELA YA ++DP P K RVE + YV+ +F RE Sbjct 210 PKCAITRACYYEPTVQRAYAELALGYAFVIDPCPVADPAKKGRVESGVKYVKGNFMPLRE 269 Query 181 FDSLAQMQQAAVTWSTEVAGLRYLRALEGAQPLRMFEAVEQQALIALPPRAFELTSWSIG 240 F SLA W AG R L +PL F EQ L LP A +W+ Sbjct 270 FHSLAHANAQLEAWIQGEAGNR-LHGSTRERPLMRFNETEQALLQPLPAVAPTCPTWAKA 328 Query 241 TVGVDTHLKVGKALYSVPWRLIGQRLHARTAGDVVQIFAGNDVVATHVR--RPSGRSTDF 298 + + H++ YS P+RLI Q L DVV+++ +++VA H R + RST Sbjct 329 KLHGNGHVQHAYCHYSAPFRLIHQTLWLEITPDVVRLYHEHELVAIHPRLFKAGTRSTVA 388 Query 299 SHYPPEKIAFHMRTPTWCRHTAELVGPASQQVIAEFMRDNAIHHLRSAQGVLGLRDKHGC 358 H PP+ A+ MR P WC A VGPA + V+ + LR+ QG+L L D+ G Sbjct 389 DHLPPDAQAYFMRDPQWCLTQATAVGPACRAVVESLFAKRVLDQLRAVQGLLRLADQFGR 448 Query 359 DRLEAACARAIEVGDPSYRTIKGILVAGTEHA---ANEPTTSSPASTAGGVPARP 410 +RL+AAC+RA+ G PSYRTIK IL G + + PT +P + G +P Sbjct 449 NRLDAACSRALNFGTPSYRTIKQILQTGLDQQPELIDAPTLEAPYLSGGHFRRQP 503 >gi|187921087|ref|YP_001890119.1| integrase catalytic subunit [Burkholderia phytofirmans PsJN] gi|187923189|ref|YP_001894831.1| integrase [Burkholderia phytofirmans PsJN] gi|187925827|ref|YP_001897469.1| integrase [Burkholderia phytofirmans PsJN] gi|187714383|gb|ACD15607.1| Integrase catalytic region [Burkholderia phytofirmans PsJN] gi|187717021|gb|ACD18245.1| Integrase catalytic region [Burkholderia phytofirmans PsJN] gi|187719525|gb|ACD20748.1| Integrase catalytic region [Burkholderia phytofirmans PsJN] Length=508 Score = 231 bits (588), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 147/408 (37%), Positives = 206/408 (51%), Gaps = 9/408 (2%) Query 3 TIAQRLRDDHGVAASESSVRRWIATHFAEEVARERVTVPRGPVDAGSEAQIDYGRLGMWF 62 TI L +HG S SSV R + AE + + P DA AQ+D+G Sbjct 93 TIHGALVRNHGYEGSYSSVYRLLQQLKAELTPDVPMRLEFKPADA---AQVDFGAGPTIT 149 Query 63 DPATARRVAVWAFVMVLAFSRHLFVRPVIRMDQTAWCACHVAAFEFFDGVPARLVCDNLR 122 D T W FVM L +SRH +V V W CH AFE+F+GV AR++ DN + Sbjct 150 DAHTGEIHKTWFFVMTLCWSRHQYVEFVRDQSVDTWLLCHRHAFEWFNGVVARVIIDNPK 209 Query 123 TGVDKPDLYDPQINRSYAELASHYATLVDPARARKPKDKPRVERPMTYVRDSFWKGREFD 182 + K +Y+P++ R+YA+ A Y+ VDP R P K VE + YV+ SF REF Sbjct 210 CAIVKACIYEPEVQRAYAQCAEGYSFKVDPCPPRDPAKKGIVESGVKYVKSSFLPLREFR 269 Query 183 SLAQMQQAAVTWSTEVAGLRYLRALEGAQPLRMFEAVEQQALIALPPRAFELTSWSIGTV 242 L + A W + A R PL+ FE VEQ L+ LP EL +W+ V Sbjct 270 DLDDANRQAQAWVMQEASTR-THGTTREVPLKRFEDVEQALLLPLPDVQPELATWARVKV 328 Query 243 GVDTHLKVGKALYSVPWRLIGQRLHARTAGDVVQIFAGNDVVATHVRR--PSGRSTDFSH 300 D H++ +A YSVP+RL G+ L + +VQ++ +++ A+HVR+ P RST H Sbjct 329 HRDAHVQFQRAYYSVPFRLAGKDLWLKATATMVQLYYEHELSASHVRQTAPGTRSTVADH 388 Query 301 YPPEKIAFHMRTPTWCRHTAELVGPASQQVIAEFMRDNAIHHLRSAQGVLGLRDKHGCDR 360 PP A+ + WC A+ +GP+ ++ D + LR+ QGVL + G R Sbjct 389 MPPAAQAWQLHDTQWCLREAQRIGPSCHALVHALFGDQVLIKLRAVQGVLRFAQQFGASR 448 Query 361 LEAACARAIEVGDPSYRTIKGILVAGTEHA--ANEPTTSSPAS-TAGG 405 LEAAC RA G PSY+ +K IL G + + + EP SS + T GG Sbjct 449 LEAACRRANHFGTPSYKAVKLILQKGLDQSWLSTEPAESSATTYTHGG 496 >gi|257091569|ref|YP_003165212.1| hypothetical protein CAP2UW1_4635 [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257048578|gb|ACV37765.1| hypothetical protein CAP2UW1_4635 [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length=512 Score = 228 bits (581), Expect = 1e-57, Method: Compositional matrix adjust. Identities = 140/397 (36%), Positives = 198/397 (50%), Gaps = 21/397 (5%) Query 1 VATIAQRLRDDHGVAASESSVRRWIATHFAEEVARERVTVPRGPVDA-------GSEAQI 53 V++I Q L HG S ++ R+I R P PV G +AQ+ Sbjct 98 VSSIRQALARQHGYDGSVHALYRFI-----------RREAPDAPVATVMLDFAVGEQAQV 146 Query 54 DYGRLGMWFDPATARRVAVWAFVMVLAFSRHLFVRPVIRMDQTAWCACHVAAFEFFDGVP 113 D+G + D + W FVM LA+SRH + V W ACH AFE+F+GVP Sbjct 147 DFGSGPLITDRHSDEVFKTWFFVMTLAWSRHQYAELVRNQSVETWLACHRHAFEWFNGVP 206 Query 114 ARLVCDNLRTGVDKPDLYDPQINRSYAELASHYATLVDPARARKPKDKPRVERPMTYVRD 173 ++ DN + + + Y+P + R+Y ELA Y ++DP P K RVE + YV+ Sbjct 207 RKVRIDNPKCAITRACYYEPTVQRAYGELALGYTFVIDPCPVADPAKKGRVEAGVKYVKR 266 Query 174 SFWKGREFDSLAQMQQAAVTWSTEVAGLRYLRALEGAQPLRMFEAVEQQALIALPPRAFE 233 +F REF SLA + TW + AG R + +PL+ F EQ L LP A Sbjct 267 NFMPLREFHSLAHANEQLQTWVRDEAGNR-IHGSTRERPLKRFNETEQALLQPLPAIAPA 325 Query 234 LTSWSIGTVGVDTHLKVGKALYSVPWRLIGQRLHARTAGDVVQIFAGNDVVATHVR--RP 291 +W+ + + H++ YS P+RLI Q L D ++I+ +++VA H R + Sbjct 326 CPTWAKAKLHGNCHVQHEYCQYSAPFRLIHQTLWLEITPDALRIYQEHELVAIHPRLFKR 385 Query 292 SGRSTDFSHYPPEKIAFHMRTPTWCRHTAELVGPASQQVIAEFMRDNAIHHLRSAQGVLG 351 ST H PP A+ MR P WC A +GPA V+ + + HLR+AQG+L Sbjct 386 GDHSTVQDHLPPHAQAYFMRDPQWCLAQAMTIGPACLAVVESLFANRVLDHLRAAQGLLR 445 Query 352 LRDKHGCDRLEAACARAIEVGDPSYRTIKGILVAGTE 388 L D+ G RL+AAC+RA+ G PSYRTIK IL G + Sbjct 446 LGDQFGRGRLDAACSRALNFGTPSYRTIKQILNTGLD 482 >gi|239906082|ref|YP_002952821.1| putative transposase [Desulfovibrio magneticus RS-1] gi|239795946|dbj|BAH74935.1| putative transposase [Desulfovibrio magneticus RS-1] Length=364 Score = 228 bits (580), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 126/316 (40%), Positives = 169/316 (54%), Gaps = 3/316 (0%) Query 75 FVMVLAFSRHLFVRPVIRMDQTAWCACHVAAFEFFDGVPARLVCDNLRTGVDKPDLYDPQ 134 FVM LA+SRH + V W CH AFEFF GVPAR++ DN + + K +DP Sbjct 20 FVMTLAWSRHQYAEIVRDQKIETWLGCHRRAFEFFGGVPARVIIDNPKCAITKACYHDPV 79 Query 135 INRSYAELASHYATLVDPARARKPKDKPRVERPMTYVRDSFWKGREFDSLAQMQQAAVTW 194 + RSYAE A Y LV P R P+ K RVE + Y++++F R+F SL + W Sbjct 80 VQRSYAEFAESYGFLVSPCPPRDPQKKGRVEAGVKYIKNNFMPLRDFRSLRDANDQLLDW 139 Query 195 STEVAGLRYLRALEGAQPLRMFEAVEQQALIALPPRAFELTSWSIGTVGVDTHLKVGKAL 254 +AG R + QPL MF E+ L +LP EL W+ + + H++ + Sbjct 140 VMSMAGNR-IHGTTKEQPLAMFVETEKHVLRSLPDVPLELAVWAKVKLHGNCHVEFRRCY 198 Query 255 YSVPWRLIGQRLHARTAGDVVQIFAGNDVVATHVR--RPSGRSTDFSHYPPEKIAFHMRT 312 YS P RL+ Q L R VQIF N++VA H R RP ++T H PPE A+ M Sbjct 199 YSAPHRLVRQTLWLRATETTVQIFHDNELVAIHSRLSRPGSKATVQEHQPPEAQAYIMHD 258 Query 313 PTWCRHTAELVGPASQQVIAEFMRDNAIHHLRSAQGVLGLRDKHGCDRLEAACARAIEVG 372 P WC AE VG A ++ I + +LR+AQG L L+ K+G RLEAAC RA++ Sbjct 259 PQWCLAQAEKVGLACRECIDALFSHKVLDNLRAAQGTLQLKKKYGAKRLEAACRRALDHH 318 Query 373 DPSYRTIKGILVAGTE 388 DP Y T+K IL G + Sbjct 319 DPRYNTVKRILEKGLD 334 >gi|340780947|ref|YP_004747554.1| integrase catalytic subunit [Acidithiobacillus caldus SM-1] gi|340781808|ref|YP_004748415.1| integrase catalytic subunit [Acidithiobacillus caldus SM-1] gi|340781882|ref|YP_004748489.1| integrase catalytic subunit [Acidithiobacillus caldus SM-1] 15 more sequence titles Length=507 Score = 219 bits (557), Expect = 8e-55, Method: Compositional matrix adjust. Identities = 143/412 (35%), Positives = 197/412 (48%), Gaps = 18/412 (4%) Query 3 TIAQRLRDDHGVAASESSVRRWIATHFAEEVARERVTVP-----RGPVDAGSEAQIDYGR 57 TI L +G S S+V+R V R R VP R G AQ+D+G Sbjct 94 TIHAALVRQYGFPGSYSAVKRL--------VRRIRQAVPPKVTSRLVFAPGEAAQVDFGA 145 Query 58 LGMWFDPATARRVAVWAFVMVLAFSRHLFVRPVIRMDQTAWCACHVAAFEFFDGVPARLV 117 + DP T W FVM L +SRH + V T W ACH AF +F GVP R++ Sbjct 146 GPLLADPRTGELRKTWFFVMTLCWSRHQYAEFVWDQSVTTWLACHRHAFSWFGGVPTRII 205 Query 118 CDNLRTGVDKPDLYDPQINRSYAELASHYATLVDPARARKPKDKPRVERPMTYVRDSFWK 177 DN + + K + DP + R+Y E A Y +DP R P+ K VE + Y++ SF Sbjct 206 IDNAKCAITKACINDPAVQRAYGEYAEGYGFRIDPCPPRDPQKKGIVEAGVKYIKRSFLP 265 Query 178 GREFDSLAQMQQAAVTWSTEVAGLRYLRALEGAQPLRMFEAVEQQALIALPPRAFELTSW 237 REF QQ W AG R + PL F VE+ L LP E+ +W Sbjct 266 LREFRDRDDAQQQLREWVLGEAGNR-VHGTTRQVPLTQFAQVERALLQPLPTNPPEICTW 324 Query 238 SIGTVGVDTHLKVGKALYSVPWRLIGQRLHARTAGDVVQIFAGNDVVATHVR--RPSGRS 295 + VG D H++ + YSVP+R +GQ L R V+I+A +++VATH R + + Sbjct 325 ARPKVGQDGHVQFARCHYSVPFRFVGQSLWLRATDTTVRIYAEHELVATHPRLFQAGSFA 384 Query 296 TDFSHYPPEKIAFHMRTPTWCRHTAELVGPASQQVIAEFMRDNAIHHLRSAQGVLGLRDK 355 T H PPE A+ + WC A +GP V+ + D + +LR Q +L LR K Sbjct 385 TVLDHLPPEAEAWQRQDLQWCLEMARGIGPHCHGVVHQLFADRQLANLRPVQNLLRLRLK 444 Query 356 HGCDRLEAACARAIEVGDPSYRTIKGILVAGT--EHAANEPTTSSPASTAGG 405 + +RLEAACARA+ G+ Y+++ IL GT E + S T GG Sbjct 445 YSPERLEAACARALHFGNARYQSVASILKHGTDQEPLPQQDLASDSTYTRGG 496 >gi|167567997|ref|ZP_02360913.1| transposase [Burkholderia oklahomensis EO147] Length=507 Score = 216 bits (551), Expect = 5e-54, Method: Compositional matrix adjust. Identities = 148/393 (38%), Positives = 201/393 (52%), Gaps = 11/393 (2%) Query 8 LRDDHGVAASESSVRRWIATHFAEEVARERVTVPRGPVDAGSEAQIDYGRLGMWFDPATA 67 LR ++G S SSV R I + A+ V + P G AQ+D+G M D Sbjct 97 LRREYGYTGSYSSVYRMIVSINADRPPEATVPLSFAP---GEAAQVDFGAGPMLPDADGV 153 Query 68 RRVAVWAFVMVLAFSRHLFVRPVIRMDQTAWCACHVAAFEFFDGVPARLVCDNLRTGVDK 127 R WAFVM LAFSRH +V V W CH AFE+F VPAR++ DN + + + Sbjct 154 LR-RTWAFVMTLAFSRHQYVEFVWDQTVATWLGCHRRAFEWFGAVPARVIIDNPKCAITR 212 Query 128 PDLYDPQINRSYAELASHYATLVDPARARKPKDKPRVERPMTYVRDSFWKGREFDSLAQM 187 YDP + R+YAE A Y +DP P K VE + YV+ +F R+F + Sbjct 213 ACTYDPVVQRAYAECAEGYGFRIDPCPPADPPKKGIVEAGVKYVKGNFLPLRQFRDFTDL 272 Query 188 QQAAVTWSTEVAGLRYLRALEGAQPLRMFEAVEQQALIALPPRAFELTSWSIGTVGVDTH 247 + A W AG R + PL +FE +E+ + LP A +L +W +V D H Sbjct 273 NEQARHWVMHEAG-RRIHGTTRKVPLELFE-IERPLMRELPAVAPDLGTWHKVSVHRDCH 330 Query 248 LKVGKALYSVPWRLIGQRLHARTAGDVVQIFAGNDVVATHV--RRPSGRSTDFSHYPPEK 305 + + LYSVP+ L+G+RL R V I+ +VA+H+ RRP R T H PPE Sbjct 331 VAHQRVLYSVPFSLVGKRLWLRATDASVCIYDDYRLVASHIRGRRPGDRLTVRDHLPPEA 390 Query 306 IAFHMRTPTWCRHTAELVGPASQQVIAEFMRDNAIHHLRSAQGVLGLRDKHGCDRLEAAC 365 AF WC A VGPA ++I + D+ + LR+AQGV+ L+ +G RLEAAC Sbjct 391 RAFLAHDRQWCFEQATRVGPACAELIELLLADHILERLRAAQGVMRLQKPYGASRLEAAC 450 Query 366 ARAIEVGDPSYRTIKGILVAGTEHAANEPTTSS 398 ARA+ P YRT+K ILV G + +P T S Sbjct 451 ARALAHASPFYRTVKTILVGGFD---QQPLTDS 480 >gi|296163781|ref|ZP_06846480.1| Integrase catalytic region [Burkholderia sp. Ch1-1] gi|295885975|gb|EFG65894.1| Integrase catalytic region [Burkholderia sp. Ch1-1] Length=514 Score = 216 bits (550), Expect = 5e-54, Method: Compositional matrix adjust. Identities = 145/408 (36%), Positives = 204/408 (50%), Gaps = 9/408 (2%) Query 3 TIAQRLRDDHGVAASESSVRRWIATHFAEEVARERVTVPRGPVDAGSEAQIDYGRLGMWF 62 TI L +HG S SSV R + AE + + P DA AQ+D+G Sbjct 99 TIHSALVRNHGYEGSYSSVYRLLQQLKAELTPDVPMRLEFKPADA---AQVDFGAGPTIT 155 Query 63 DPATARRVAVWAFVMVLAFSRHLFVRPVIRMDQTAWCACHVAAFEFFDGVPARLVCDNLR 122 D T W FVM L +SRH +V V W CH AFE+F+GV AR++ DN + Sbjct 156 DAHTGEIHKTWFFVMTLCWSRHQYVEFVRDQSVDTWLLCHRHAFEWFNGVVARVIIDNPK 215 Query 123 TGVDKPDLYDPQINRSYAELASHYATLVDPARARKPKDKPRVERPMTYVRDSFWKGREFD 182 + K +Y+P++ R+YA+ A Y+ VDP R P K VE + YV+ SF REF Sbjct 216 CAIVKACIYEPEVQRAYAQCAEGYSFKVDPCPPRDPAKKGIVESGVKYVKSSFLPLREFR 275 Query 183 SLAQMQQAAVTWSTEVAGLRYLRALEGAQPLRMFEAVEQQALIALPPRAFELTSWSIGTV 242 L + A W A R PL+ F+ VEQ L+ LP EL +W+ V Sbjct 276 DLDDANRQAQAWVMHEASTR-THGTTREVPLKRFDDVEQALLLPLPDVPPELATWARVKV 334 Query 243 GVDTHLKVGKALYSVPWRLIGQRLHARTAGDVVQIFAGNDVVATHVRR--PSGRSTDFSH 300 D H++ +A YSVP+RL G+ L + +VQ++ +++ A+HVR+ P RST H Sbjct 335 HRDAHVQFQRAYYSVPFRLAGKDLWLKATATMVQLYYEHELSASHVRQTAPGTRSTVADH 394 Query 301 YPPEKIAFHMRTPTWCRHTAELVGPASQQVIAEFMRDNAIHHLRSAQGVLGLRDKHGCDR 360 PP A+ + WC A+ +GP+ ++ D + LR+ QGVL + G R Sbjct 395 MPPAAQAWQLHDTQWCLREAQRIGPSCYALVHALFGDQVLIKLRAVQGVLRFAQQFGTSR 454 Query 361 LEAACARAIEVGDPSYRTIKGILVAGTEHA--ANEPTTSSPAS-TAGG 405 LEAAC RA G PSY+ +K IL G + + + EP S + T GG Sbjct 455 LEAACRRANHFGTPSYKAVKLILQKGLDQSWLSTEPVESGATTYTHGG 502 >gi|161506571|ref|YP_001573692.1| integrase catalytic region [Burkholderia multivorans ATCC 17616] gi|161521278|ref|YP_001584705.1| integrase catalytic region [Burkholderia multivorans ATCC 17616] gi|161522683|ref|YP_001585612.1| integrase catalytic region [Burkholderia multivorans ATCC 17616] 21 more sequence titles Length=510 Score = 214 bits (545), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 147/404 (37%), Positives = 198/404 (50%), Gaps = 12/404 (2%) Query 3 TIAQRLRDDHGVAASESSVRRWIATHFAEEVARERVTVPRGPVDAGSEAQIDYGRLGMWF 62 TI L+ +HG A S +V+R + AE + P DA AQ+D+G + Sbjct 100 TIHAALQRNHGYAGSYCAVKRMLRHLAAERSVATTTILDFAPADA---AQVDFGAGPVLT 156 Query 63 DPATARRVAVWAFVMVLAFSRHLFVRPVIRMDQTAWCACHVAAFEFFDGVPARLVCDNLR 122 A V W FVM L +SRH + V+ W A H AFE+F G P R++ DN + Sbjct 157 VEGIA--VRTWIFVMTLCWSRHQYAEIVLDQTVETWLASHRRAFEWFGGCPDRVIIDNAK 214 Query 123 TGVDKPDLYDPQINRSYAELASHYATLVDPARARKPKDKPRVERPMTYVRDSFWKGREFD 182 + + Y+P + RSYA LA Y +D P+ K VE + YV+ SF REF Sbjct 215 CAIIRACRYEPAVQRSYAALAEGYGFRIDACPPHDPQKKGVVESGVKYVKKSFVPLREFR 274 Query 183 SLAQMQQAAVTWSTEVAGLRYLRALEGAQPLRMFEAVEQQALIALPPRAFELTSWSIGTV 242 LA + W + AG R + +PL F VE+ L ALP L+ W V Sbjct 275 DLADANRQLREWVMQQAGTR-IHGTVHERPLTRF-GVERPLLAALPDVPPVLSVWKEVAV 332 Query 243 GVDTHLKVGKALYSVPWRLIGQRLHARTAGDVVQIFAGNDVVATHVR-RPSGRSTDFSHY 301 D H+ ALYS P+ L+G+ L + V+Q+F +++VATH R R GR T H Sbjct 333 HRDGHVVYKHALYSAPFTLVGKSLWLKATDTVIQLFHRHELVATHPRQRAGGRHTVRDHQ 392 Query 302 PPEKIAFHMRTPTWCRHTAELVGPASQQVIAEFMRDNAIHHLRSAQGVLGLRDKHGCDRL 361 PPE A+ P WC A+ +GP+ VI D + +LR AQG++ LR K G RL Sbjct 393 PPEAQAWLEHDPQWCLARAKEIGPSCHGVILALFNDKVLVNLRGAQGIIRLRQKVGDQRL 452 Query 362 EAACARAIEVGDPSYRTIKGILVAGTEHAANEPTTSSPASTAGG 405 EAAC RA+ Y TIKGIL G + +EP PAS G Sbjct 453 EAACERALAFSSAKYSTIKGILDKGLD---SEP-VPRPASAPTG 492 >gi|344200422|ref|YP_004784748.1| integrase catalytic subunit [Acidithiobacillus ferrivorans SS3] gi|343775866|gb|AEM48422.1| Integrase catalytic region [Acidithiobacillus ferrivorans SS3] Length=507 Score = 212 bits (540), Expect = 8e-53, Method: Compositional matrix adjust. Identities = 138/410 (34%), Positives = 191/410 (47%), Gaps = 14/410 (3%) Query 3 TIAQRLRDDHGVAASESSVRRW---IATHFAEEVARERVTVPRGPVDAGSEAQIDYGRLG 59 TI L +HG S S+VRR +A A + + P G AQ+D+G Sbjct 94 TIHAALVRNHGYTGSYSAVRRVLLRVAPVKAPDATMRLIFAP------GEAAQVDFGAGP 147 Query 60 MWFDPATARRVAVWAFVMVLAFSRHLFVRPVIRMDQTAWCACHVAAFEFFDGVPARLVCD 119 DP T W FVM L +SRH + V W ACH AF++F GVP R++ D Sbjct 148 AMIDPVTGEIRKTWFFVMTLCWSRHQYAEIVWNQTTMTWLACHRHAFKWFGGVPGRIIID 207 Query 120 NLRTGVDKPDLYDPQINRSYAELASHYATLVDPARARKPKDKPRVERPMTYVRDSFWKGR 179 N + + K + DP + RSYAE A Y +D P K VE + Y++ F R Sbjct 208 NAKCAITKACINDPTVQRSYAECAEGYLFKIDACPPHDPAKKGIVESGVKYIKKGFMPLR 267 Query 180 EFDSLAQMQQAAVTWSTEVAGLRYLRALEGAQPLRMFEAVEQQALIALPPRAFELTSWSI 239 +F + W AG R + PL F VE+ L LP +++ W Sbjct 268 DFRDRDDANRQLQKWIRTEAGNR-IHGTTRQAPLTQFVEVEKPLLQRLPEAPPDISEWKQ 326 Query 240 GTVGVDTHLKVGKALYSVPWRLIGQRLHARTAGDVVQIFAGNDVVATHVR--RPSGRSTD 297 V D H++ YSVP+RLIGQ+L R ++I+ +++VATH R + ST Sbjct 327 PKVHRDAHVQYAYCFYSVPFRLIGQQLWLRATDTTIRIYQEHELVATHPRLFQHGTASTV 386 Query 298 FSHYPPEKIAFHMRTPTWCRHTAELVGPASQQVIAEFMRDNAIHHLRSAQGVLGLRDKHG 357 H P E A+ + WC AE +GP V+ + D + +LR+ Q +L LRDK+ Sbjct 387 ADHMPLEAQAWQSQDIQWCLRMAEAIGPHCYGVVHQLFADRVLVNLRTVQNILRLRDKYT 446 Query 358 CDRLEAACARAIEVGDPSYRTIKGILVAGTEHAANEPTTSSPAS--TAGG 405 RLEAACARA+ +P Y I IL G + P T S T+GG Sbjct 447 PQRLEAACARALRFSNPRYGAISQILKKGLDQEPLSPVTPESGSTYTSGG 496 >gi|55847597|dbj|BAD72779.1| transposase [Burkholderia multivorans ATCC 17616] Length=421 Score = 203 bits (517), Expect = 4e-50, Method: Compositional matrix adjust. Identities = 136/363 (38%), Positives = 182/363 (51%), Gaps = 12/363 (3%) Query 44 PVDAGSEAQIDYGRLGMWFDPATARRVAVWAFVMVLAFSRHLFVRPVIRMDQTAWCACHV 103 P DA AQ+D+G + A V W FVM L +SRH + V+ W A H Sbjct 52 PADA---AQVDFGAGPVLTVEGIA--VRTWIFVMTLCWSRHQYAEIVLDQTVETWLASHR 106 Query 104 AAFEFFDGVPARLVCDNLRTGVDKPDLYDPQINRSYAELASHYATLVDPARARKPKDKPR 163 AFE+F G P R++ DN + + + Y+P + RSYA LA Y +D P+ K Sbjct 107 RAFEWFGGCPDRVIIDNAKCAIIRACRYEPAVQRSYAALAEGYGFRIDACPPHDPQKKGV 166 Query 164 VERPMTYVRDSFWKGREFDSLAQMQQAAVTWSTEVAGLRYLRALEGAQPLRMFEAVEQQA 223 VE + YV+ SF REF LA + W + AG R + +PL F VE+ Sbjct 167 VESGVKYVKKSFVPLREFRDLADANRQLREWVMQQAGTR-IHGTVHERPLTRF-GVERPL 224 Query 224 LIALPPRAFELTSWSIGTVGVDTHLKVGKALYSVPWRLIGQRLHARTAGDVVQIFAGNDV 283 L ALP L+ W+ V D H+ ALYS P+ L+G+ L + V+Q+F +++ Sbjct 225 LAALPDVPPVLSVWNEVAVHRDGHVVYKHALYSAPFTLVGKSLWLKATDTVIQLFHRHEL 284 Query 284 VATHVR-RPSGRSTDFSHYPPEKIAFHMRTPTWCRHTAELVGPASQQVIAEFMRDNAIHH 342 VATH R R GR T H PPE A+ P WC A+ +GP+ VI D + + Sbjct 285 VATHPRQRAGGRHTVRDHQPPEAQAWLEHDPQWCLARAKEIGPSCHGVILALFNDKVLVN 344 Query 343 LRSAQGVLGLRDKHGCDRLEAACARAIEVGDPSYRTIKGILVAGTEHAANEPTTSSPAST 402 LR AQG++ LR K G RLEAAC RA+ Y TIKGIL G + +EP PAS Sbjct 345 LRGAQGIIRLRQKVGDQRLEAACERALAFSSAKYSTIKGILDKGLD---SEP-VPRPASA 400 Query 403 AGG 405 G Sbjct 401 PTG 403 >gi|315441533|ref|YP_004074410.1| transposase [Mycobacterium sp. Spyr1] gi|315265188|gb|ADU01929.1| transposase [Mycobacterium sp. Spyr1] Length=542 Score = 201 bits (511), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 130/360 (37%), Positives = 189/360 (53%), Gaps = 6/360 (1%) Query 34 ARERVTVPRGPVDAGSEAQIDYGRLGMWFDPATARRVAVWAFVMVLAFSRHLFVRPVIRM 93 R+ TV D G E QID+G LGM D RR V A + A+SRH+FV Sbjct 143 GRKDTTVRVADGDPGVECQIDFGYLGMLTDADDGRRRKVHALIFTAAYSRHMFVWLSYSQ 202 Query 94 DQTAWCACHVAAFEFFDGVPARLVCDNLRTGVDKPDLYDPQINRSYAELASHYATLVDPA 153 A A AA+EFF GV A L+ DNL+ + D +P+ + + + A H L DPA Sbjct 203 TLAAVIAGCQAAWEFFGGVFAVLIPDNLKPVIAAADAVNPRFTQGWLDYAGHVGFLTDPA 262 Query 154 RARKPKDKPRVERPMTYVRDSFWKGREFDSLAQMQQAAVTWSTEVAGLRYLRALEGAQPL 213 R R PKDKPRVER + YVR +FW G F S+ Q QQA W AG R + A+P+ Sbjct 263 RVRSPKDKPRVERAVQYVRRNFWDGETFTSIEQAQQAVTVWCLRTAGTR-IHGSTCARPV 321 Query 214 RMFEAVEQQALIALPPRAFELTSWSIGTVGVDTHLKVGKALYSVPWRLIGQRLHARTAGD 273 +F EQ L+A+P A+++ + V D H +V KALYS+P + IG + R + Sbjct 322 EVFTTEEQPLLLAVPG-AYDVPVFKAVKVHRDFHAEVAKALYSLPEQWIGTTVDVRADCE 380 Query 274 VVQIFAGNDVVATHVRRPS-GRSTDFSHYPPEKIAFHMRTPTWCRHTAELVGPASQQVIA 332 +V+ + +V H R+P+ GRSTD + P K+ + +R T T GP + + A Sbjct 381 LVKFYHRGVLVKVHPRQPAGGRSTDRADLPEHKVGYALRDLTTLIATCAAYGP-NVGIYA 439 Query 333 EFMRDNAI--HHLRSAQGVLGLRDKHGCDRLEAACARAIEVGDPSYRTIKGILVAGTEHA 390 E + D+ + +R+ + GL ++G R+E AC+ A+++ S I +L TE+A Sbjct 440 ERILDDPLPWTRMRTVYRLQGLVRRYGAQRVEQACSVALDLDVVSVNKIASMLERATENA 499 >gi|33867208|ref|NP_898766.1| putative transposase [Rhodococcus erythropolis] gi|33669042|gb|AAP74036.1| putative transposase [Rhodococcus erythropolis] Length=585 Score = 194 bits (493), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 130/371 (36%), Positives = 191/371 (52%), Gaps = 23/371 (6%) Query 46 DAGSEAQIDYGRLGMWFDPATARRVAVWAFVMVLAFSRHLFVRPVIRMDQTAWCACHVAA 105 D GSE QID+G LG DP T RR V A + +SRH+FV A A AA Sbjct 155 DPGSECQIDFGYLGCLTDPDTGRRRKVHALIFTAVYSRHMFVWLTYSQTLAAVIAGCEAA 214 Query 106 FEFFDGVPARLVCDNLRTGVDKPDLYDPQINRSYAELASHYATLVDPARARKPKDKPRVE 165 + FF GV L+ DNL+ V + D +P++++ + + A H + DPAR R PKDKPRVE Sbjct 215 WTFFGGVFKVLIPDNLKAVVTEADAVNPRLSQGWLDYAQHTGFVTDPARIRSPKDKPRVE 274 Query 166 RPMTYVRDSFWKGREFDSLAQMQQAAVTWSTEVAGLRYLRALEGAQPLRMFEAVEQQALI 225 R + YVR ++W G +F LA+ QQ A W + AG R A+PL +F+ E L+ Sbjct 275 RAVQYVRGNYWAGEDFTDLAEAQQRAEAWCRDTAG-RRTHGTTAARPLEVFDEDEAPMLL 333 Query 226 ALPPRAFELTSWSIGTVGVDTHLKVGKALYSVPWRLIGQRLHARTAGDVVQIFAGNDVVA 285 A+PP +++ + V D H +V KALYS+P + IG L R +V+ + +V Sbjct 334 AVPP-TYDVPIFKQVKVHRDFHAEVAKALYSIPGQWIGSVLEVRADSALVKFYLRGTLVK 392 Query 286 THVRRPS-GRSTDFSHYPPEKIAFHMRTPTWCRHTAELVGPASQQ-----VIAEFMRDNA 339 H R+P+ GRSTD P EK + M R L+G + + AE + D+ Sbjct 393 VHPRQPAGGRSTDPEDLPTEKAGYAM------RDLDRLIGTCAGHGRAVGIYAERLLDDP 446 Query 340 IH--HLRSAQGVLGLRDKHGCDRLEAACARAIEVGDPSYRTIKGILVAGTEHAANEPTTS 397 + +R+ +LGL ++G +E+AC+ A+++ S I +L TE T+ Sbjct 447 LPWIRMRAVYRLLGLVRRYGPGPVESACSTALDLDVVSVSKIASMLERATE-------TT 499 Query 398 SPASTAGGVPA 408 +P A G A Sbjct 500 TPLLPAAGSAA 510 >gi|291525627|emb|CBK91214.1| Transposase and inactivated derivatives [Eubacterium rectale DSM 17629] Length=514 Score = 194 bits (492), Expect = 3e-47, Method: Compositional matrix adjust. Identities = 132/392 (34%), Positives = 193/392 (50%), Gaps = 35/392 (8%) Query 31 EEVARERVTVPRGPVDAGSEAQIDY-GRLGMWFDPATARRVAVWAFVMVLAFSRHLFVRP 89 EE R + +PR P G + ++D+ G DP T W FV VL +S++ FV+ Sbjct 121 EEKRRATMHIPRKP---GEQIEVDWAGDPTHIIDPDTGEITDAWIFVGVLTYSQYAFVKA 177 Query 90 VIRMDQTAWCACHVAAFEFFDGVPARLVCDNLRTGVD--KPDLYDPQINRSYAELASHYA 147 + W HV F+FF GV LV DN T V+ K D Y+ +N +Y E+A HY Sbjct 178 YMNEKTDNWIKAHVQMFDFFGGVTPMLVSDNCTTAVNHKKSDWYNTALNTTYHEMAEHYN 237 Query 148 TLVDPARARKPKDKPRVERPMTYVRDSFW-----KGREFDSLAQMQQAAVTWSTEVAGLR 202 + PAR RKPKDKP VE + + S W + +F SLA++ A++ + R Sbjct 238 LAILPARVRKPKDKPNVEGSVGKI--STWITAALRNEQFFSLAEL-NASIREKLDAYNAR 294 Query 203 YLRALEGAQPLRMFEAVEQQALIALPPRAFELTSWSIGTVGVDTHLKVGKALYSVPWRLI 262 + E ++ L +F E L LP FEL W TV + H+ V + YSVP++ I Sbjct 295 KFQKKECSR-LSLFLGEEMPLLAPLPATPFELAEWKQATVQFNYHIAVDRMFYSVPYQYI 353 Query 263 GQRLHARTAGDVVQIFAGNDVVATHVRRPSGRSTDFS----HYPPEKIAFHMRTPTW--- 315 ++ R V+IF ++ +A+H RR GRS +S H PPE H + W Sbjct 354 KNKVDVRITDTTVEIFYNHNRIASH-RRLYGRSGQYSTVTEHMPPE----HQKYLEWNGE 408 Query 316 -CRHTAELVGPASQQVIAEFMRDNAIHH--LRSAQGVLGLRDKHGCDRLEAACARAIEV- 371 R A+ +G + +V+ + I RS G+L L +KH ++LE CA A+ Sbjct 409 RFRKWADSIGINTSKVVDAILTSGRIEQQSYRSCMGLLKLAEKHSPEKLEQVCATALSYS 468 Query 372 GDPSYRTIKGILVAGTEHAANEPTTSSPASTA 403 G PSY++IK +L A +EP T S +S A Sbjct 469 GKPSYKSIKNLLAA----TKDEPDTGSESSQA 496 >gi|150389540|ref|YP_001319589.1| integrase catalytic subunit [Alkaliphilus metalliredigens QYMF] gi|149949402|gb|ABR47930.1| Integrase, catalytic region [Alkaliphilus metalliredigens QYMF] Length=515 Score = 193 bits (490), Expect = 5e-47, Method: Compositional matrix adjust. Identities = 121/362 (34%), Positives = 180/362 (50%), Gaps = 24/362 (6%) Query 48 GSEAQIDY-GRLGMWFDPATARRVAVWAFVMVLAFSRHLFVRPVIRMDQTAWCACHVAAF 106 G + ++D+ G+ DP T + FV VL S++ +V + Q W HV A+ Sbjct 135 GEQMEVDWAGQTAEIVDPNTGEVLQASVFVAVLFCSQYAYVEAFLSQKQECWIGAHVNAY 194 Query 107 EFFDGVPARLVCDNLRTGVDKPDLYDPQINRSYAELASHYATLVDPARARKPKDKPRVER 166 +FF G L+ DNL+TGVDK Y P IN++Y E+A HY+T V PAR RKPKDKP VE Sbjct 195 QFFGGATRILIPDNLKTGVDKVSWYTPTINKTYHEMAEHYSTAVIPARVRKPKDKPNVEG 254 Query 167 PMTYVRDSFW-----KGREFDSLAQMQQAAVTWSTEVAGLRYLRALEGAQPLRMFEAVEQ 221 + + S W + ++F SL ++ +A + E + + + L +F E+ Sbjct 255 VVGII--STWIIAALRNQQFFSLRELNEAILEKLYEFNSKPFQKKM--GSRLSVFLEEEK 310 Query 222 QALIALPPRAFELTSWSIGTVGVDTHLKVGKALYSVPWRLIGQRLHARTAGDVVQIFAGN 281 ALI LP +EL W TV + H+ V K YSVP+ I ++ R +VV++F N Sbjct 311 SALIPLPATPYELALWKTATVQFNYHISVEKMHYSVPYEYIKHKVDVRMTRNVVEVFFNN 370 Query 282 DVVATHVR---RPSGRSTDFSHYPPEKIAFHMRTPTWCRHT----AELVGPASQQVIAEF 334 +A+HVR R ST H P + H TW A+ +GP + I Sbjct 371 HRIASHVRCYGRVGQYSTVVEHMPED----HKSYTTWNSERFISWAKGIGPNTSIAIKAI 426 Query 335 MRDNAIHH--LRSAQGVLGLRDKHGCDRLEAACARAIEVG-DPSYRTIKGILVAGTEHAA 391 + + I +S G+L L DK+ R+EAAC +A+ PSY+ ++ IL G + Sbjct 427 LSTHKIEQQGYKSCMGLLKLADKYSVTRVEAACKKALSYTPRPSYKNVQTILKTGQDRVT 486 Query 392 NE 393 E Sbjct 487 EE 488 >gi|226323126|ref|ZP_03798644.1| hypothetical protein COPCOM_00898 [Coprococcus comes ATCC 27758] gi|225208316|gb|EEG90670.1| hypothetical protein COPCOM_00898 [Coprococcus comes ATCC 27758] Length=514 Score = 191 bits (485), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 129/395 (33%), Positives = 196/395 (50%), Gaps = 32/395 (8%) Query 31 EEVARERVTVPRGPVDAGSEAQIDY-GRLGMWFDPATARRVAVWAFVMVLAFSRHLFVRP 89 EE R + +PR P G + ++D+ G DP T W FV VL +S++ FV+ Sbjct 121 EEKRRATMHIPRKP---GEQIEVDWAGDPAHIIDPDTGEITDAWIFVGVLTYSQYAFVKA 177 Query 90 VIRMDQTAWCACHVAAFEFFDGVPARLVCDNLRTGVD--KPDLYDPQINRSYAELASHYA 147 + W H+ F+FF GV LV DN T V+ K D Y+ +N +Y E+A HY Sbjct 178 YMNEKTDNWIKAHIQMFDFFGGVTPMLVSDNCTTAVNHKKSDWYNTALNTTYHEMAEHYN 237 Query 148 TLVDPARARKPKDKPRVERPMTYVRDSFW-----KGREFDSLAQMQQAAVTWSTEVAGLR 202 + PAR RKPKDKP VE + + S W + +F SLA++ A++ + R Sbjct 238 LAILPARVRKPKDKPNVEGSVGKI--STWITAALRNEQFFSLAELN-ASIREKLDAYNAR 294 Query 203 YLRALEGAQPLRMFEAVEQQALIALPPRAFELTSWSIGTVGVDTHLKVGKALYSVPWRLI 262 + E ++ L +F E L LP FEL W TV + H+ V + YSVP++ I Sbjct 295 KFQKKECSR-LSLFLGEEMPLLAPLPATPFELAEWKQATVQFNYHIAVDRMFYSVPYQYI 353 Query 263 GQRLHARTAGDVVQIFAGNDVVATHVRRPSGRSTDFS----HYPPEKIAFHMRTPTW--- 315 ++ R V+IF ++ +A+H RR GRS+ +S H P E H + W Sbjct 354 KNKVDVRITDTTVEIFYNHNRIASH-RRLYGRSSQYSTVTEHMPQE----HQKYLEWNGD 408 Query 316 -CRHTAELVGPASQQVIAEFMRDNAIHH--LRSAQGVLGLRDKHGCDRLEAACARAIEV- 371 R A+ +G + +V+ + I RS G+L L +K+ ++LE CA+A+ Sbjct 409 RFRKWADSIGINTSKVVDAILTSGRIEQQSYRSCMGLLKLAEKYSPEKLEQVCAKALSYS 468 Query 372 GDPSYRTIKGILVAGTEHAANEPTTSSPASTAGGV 406 G PSY++IK +LVA T+ A + + SS G+ Sbjct 469 GKPSYKSIKNLLVA-TKDAPDTESESSQVEKPHGI 502 >gi|338530182|ref|YP_004663516.1| ISBmu1b transposase [Myxococcus fulvus HW-1] gi|338534017|ref|YP_004667351.1| ISBmu1b transposase [Myxococcus fulvus HW-1] gi|338536919|ref|YP_004670253.1| ISBmu1b transposase [Myxococcus fulvus HW-1] gi|338536964|ref|YP_004670298.1| ISBmu1b transposase [Myxococcus fulvus HW-1] gi|337256278|gb|AEI62438.1| ISBmu1b transposase [Myxococcus fulvus HW-1] gi|337260113|gb|AEI66273.1| ISBmu1b transposase [Myxococcus fulvus HW-1] gi|337263015|gb|AEI69175.1| ISBmu1b transposase [Myxococcus fulvus HW-1] gi|337263060|gb|AEI69220.1| ISBmu1b transposase [Myxococcus fulvus HW-1] Length=523 Score = 188 bits (478), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 140/392 (36%), Positives = 202/392 (52%), Gaps = 9/392 (2%) Query 4 IAQRLRDDHGV-AASESSVRRWIAT-HFAEEVARERVTVPRGPVDAGSEAQIDYGRLGMW 61 I RL+ + GV S S+V+R + + A+ V+ E V +P G AQ+D+G +G Sbjct 98 IFTRLQMEAGVPVGSLSAVKRLVGSVRRAQGVSEEDVAIP-VETAPGEVAQVDFGEVGRL 156 Query 62 FDPATARRVAVWAFVMVLAFSRHLFVRPVIRMDQTAWCACHVAAFEFFDGVPARLVCDNL 121 +D T W FVMVL +SRHLF V W CH AAF +F GVP +V DNL Sbjct 157 YDADTGTLRRAWVFVMVLGYSRHLFATLVFDQRVETWLRCHEAAFAYFGGVPRCVVPDNL 216 Query 122 RTGVDKPDL---YDPQINRSYAELASHYATLVDPARARKPKDKPRVERPMTYVRDSFWKG 178 + V + + + RSY LA HY +VDPA R P+ K +VE + YV+ +F+ G Sbjct 217 KAAVVRAAFGVDGERALQRSYRALARHYGFIVDPAPPRAPEKKGKVEAGVRYVKGNFFAG 276 Query 179 REFDSLAQMQQAAVTWSTEVAGLRYLRALEGAQPLRMFEAVEQQALIALPPRAFELTSWS 238 R + + + A W +VA +R + G QP +F+ E AL ALP A+ W Sbjct 277 RAGEDARECEVALQRWLRDVASVR-VHGTTGRQPRLLFQQAEAAALRALPAAAWAPEVWH 335 Query 239 IGTVGVDTHLKVGKALYSVPWRLIGQRLHARTAGDVVQIFAGNDVVATHVRRPSG-RSTD 297 V D H+ G+ LYSVPWRLIGQR+ V+++A ++ VATH R G RST Sbjct 336 EARVHRDAHVMYGRRLYSVPWRLIGQRVWLCVTAHDVRVYAQDERVATHPLRGEGHRSTV 395 Query 298 FSHYPPEKIAFHMRTPTWCRHTAELVGPASQQVI-AEFMRDNAIHHLRSAQGVLGLRDKH 356 +H P + A R+ A +GP ++ + A F D+ + LR Q ++ + Sbjct 396 EAHLPEARAALRHRSRGHWEARAARLGPHTEAYVRAVFDADDVLSQLRCVQAMVVHLEGF 455 Query 357 GCDRLEAACARAIEVGDPSYRTIKGILVAGTE 388 +R EAAC RA+ G+ Y+ +K IL G + Sbjct 456 PRERAEAACRRALHFGNLRYQGLKDILRRGLD 487 >gi|338533101|ref|YP_004666435.1| ISBmu1b transposase [Myxococcus fulvus HW-1] gi|337259197|gb|AEI65357.1| ISBmu1b transposase [Myxococcus fulvus HW-1] Length=439 Score = 188 bits (478), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 140/392 (36%), Positives = 202/392 (52%), Gaps = 9/392 (2%) Query 4 IAQRLRDDHGV-AASESSVRRWIAT-HFAEEVARERVTVPRGPVDAGSEAQIDYGRLGMW 61 I RL+ + GV S S+V+R + + A+ V+ E V +P G AQ+D+G +G Sbjct 14 IFTRLQMEAGVPVGSLSAVKRLVGSVRRAQGVSEEDVAIP-VETAPGEVAQVDFGEVGRL 72 Query 62 FDPATARRVAVWAFVMVLAFSRHLFVRPVIRMDQTAWCACHVAAFEFFDGVPARLVCDNL 121 +D T W FVMVL +SRHLF V W CH AAF +F GVP +V DNL Sbjct 73 YDADTGTLRRAWVFVMVLGYSRHLFATLVFDQRVETWLRCHEAAFAYFGGVPRCVVPDNL 132 Query 122 RTGVDKPDL---YDPQINRSYAELASHYATLVDPARARKPKDKPRVERPMTYVRDSFWKG 178 + V + + + RSY LA HY +VDPA R P+ K +VE + YV+ +F+ G Sbjct 133 KAAVVRAAFGVDGERALQRSYRALARHYGFIVDPAPPRAPEKKGKVEAGVRYVKGNFFAG 192 Query 179 REFDSLAQMQQAAVTWSTEVAGLRYLRALEGAQPLRMFEAVEQQALIALPPRAFELTSWS 238 R + + + A W +VA +R + G QP +F+ E AL ALP A+ W Sbjct 193 RAGEDARECEVALQRWLRDVASVR-VHGTTGRQPRLLFQQAEAAALRALPAAAWAPEVWH 251 Query 239 IGTVGVDTHLKVGKALYSVPWRLIGQRLHARTAGDVVQIFAGNDVVATHVRRPSG-RSTD 297 V D H+ G+ LYSVPWRLIGQR+ V+++A ++ VATH R G RST Sbjct 252 EARVHRDAHVMYGRRLYSVPWRLIGQRVWLCVTAHDVRVYAQDERVATHPLRGEGHRSTV 311 Query 298 FSHYPPEKIAFHMRTPTWCRHTAELVGPASQQVI-AEFMRDNAIHHLRSAQGVLGLRDKH 356 +H P + A R+ A +GP ++ + A F D+ + LR Q ++ + Sbjct 312 EAHLPEARAALRHRSRGHWEARAARLGPHTEAYVRAVFDADDVLSQLRCVQAMVVHLEGF 371 Query 357 GCDRLEAACARAIEVGDPSYRTIKGILVAGTE 388 +R EAAC RA+ G+ Y+ +K IL G + Sbjct 372 PRERAEAACRRALHFGNLRYQGLKDILRRGLD 403 >gi|197103158|ref|YP_002128536.1| transposase, ISPsy14 [Phenylobacterium zucineum HLK1] gi|197103367|ref|YP_002128745.1| transposase, ISPsy14 [Phenylobacterium zucineum HLK1] gi|197103416|ref|YP_002128794.1| transposase, ISPsy14 [Phenylobacterium zucineum HLK1] gi|196480434|gb|ACG79961.1| transposase, ISPsy14 [Phenylobacterium zucineum HLK1] gi|196480643|gb|ACG80170.1| transposase, ISPsy14 [Phenylobacterium zucineum HLK1] gi|196480692|gb|ACG80219.1| transposase, ISPsy14 [Phenylobacterium zucineum HLK1] Length=511 Score = 188 bits (477), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 128/379 (34%), Positives = 183/379 (49%), Gaps = 11/379 (2%) Query 24 WIATHFAEEVARERVTVPRGPVDAGSEAQIDY-GRLGMWFDPATARRVAVWAFVMVLAFS 82 W H+ AR T+ R AG + +DY G DP T + FV + S Sbjct 117 WFCEHYEAWKARRSPTM-RQKHLAGDKVFVDYAGDPIELIDPETGEARPMKLFVAAMGAS 175 Query 83 RHLFVRPVIRMDQTAWCACHVAAFEFFDGVPARLVCDNLRTGVDKPDLYDPQINRSYAEL 142 +++ W CHV F F GVPA +VCDNL+ GV + D Y+PQINR+Y +L Sbjct 176 SYVYAEARPSEGLADWIGCHVGLFAFLGGVPATIVCDNLKAGVARGDRYEPQINRTYQDL 235 Query 143 ASHYATLVDPARARKPKDKPRVERPMTYVRD---SFWKGREFDSLAQMQQAAVTWSTEVA 199 A HY T V PAR KP+DK +VE+ + + + F SL ++ A E+ Sbjct 236 ARHYGTAVIPARPYKPRDKAKVEQAVLLAERWILARLRNLRFFSLVELNAAIAELVAELN 295 Query 200 GLRYLRALEGAQPLRMFEAVEQQALIALPPRAFELTSWSIGTVGVDTHLKVGKALYSVPW 259 R +RA GA +F AV+ AL LP + W I V +D H+++ + YSVP+ Sbjct 296 A-RVMRAY-GASRAELFAAVDVPALKPLPAEPYAFAEWKICRVALDYHVEIDGSWYSVPY 353 Query 260 RLIGQRLHARTAGDVVQIFAGNDVVATHVRRPS--GRSTDFSHYPPEKIAFHMRTPTWCR 317 RLI +++ R + V+IF VA+H R P G +T H P TP Sbjct 354 RLIREQVDVRASERTVEIFHKGQRVASHARSPGRRGHTTIPEHMPSSHRRHAEWTPARLM 413 Query 318 HTAELVGPASQQVIAEFM--RDNAIHHLRSAQGVLGLRDKHGCDRLEAACARAIEVGDPS 375 +A +GPA+ +I+ M R + RS G+L L +G RLEAAC RA ++ S Sbjct 414 ASAGKIGPAAAALISAIMAERPHPEQGFRSCMGILALEKTYGRARLEAACQRAAQIKARS 473 Query 376 YRTIKGILVAGTEHAANEP 394 +++ IL G + EP Sbjct 474 ASSVRSILQTGLDRGFLEP 492 >gi|153854110|ref|ZP_01995418.1| hypothetical protein DORLON_01409 [Dorea longicatena DSM 13814] gi|149753159|gb|EDM63090.1| hypothetical protein DORLON_01409 [Dorea longicatena DSM 13814] Length=514 Score = 187 bits (474), Expect = 4e-45, Method: Compositional matrix adjust. Identities = 129/395 (33%), Positives = 194/395 (50%), Gaps = 32/395 (8%) Query 31 EEVARERVTVPRGPVDAGSEAQIDY-GRLGMWFDPATARRVAVWAFVMVLAFSRHLFVRP 89 EE R + +PR P G + ++D+ G DP T W FV VL +S++ FV+ Sbjct 121 EEKRRATMHIPRKP---GEQIEVDWAGDPAHIIDPDTGEITNAWIFVGVLTYSQYAFVKA 177 Query 90 VIRMDQTAWCACHVAAFEFFDGVPARLVCDNLRTGVD--KPDLYDPQINRSYAELASHYA 147 + W HV F+FF GV LV DN T V+ K D Y+ +N +Y E+A HY Sbjct 178 YMNEKTDNWIKAHVQIFDFFGGVTPMLVSDNCTTAVNHKKSDWYNTALNTTYHEMAEHYN 237 Query 148 TLVDPARARKPKDKPRVERPMTYVRDSFW-----KGREFDSLAQMQQAAVTWSTEVAGLR 202 + PAR RKPKDKP VE + + S W + +F SLA++ A++ + R Sbjct 238 LAILPARVRKPKDKPNVEGSVGKI--STWITAALRNEQFFSLAEL-NASIREKLDAYNAR 294 Query 203 YLRALEGAQPLRMFEAVEQQALIALPPRAFELTSWSIGTVGVDTHLKVGKALYSVPWRLI 262 + E ++ L +F E L LP FEL W TV + H+ V + YSVP++ I Sbjct 295 KFQKKECSR-LSLFLGEEMPLLAPLPATPFELAEWKQATVQFNYHIAVDRMFYSVPYQYI 353 Query 263 GQRLHARTAGDVVQIFAGNDVVATHVRRPSGRSTDFS----HYPPEKIAFHMRTPTW--- 315 ++ R V+IF ++ +A+H RR GRS +S H P E H + W Sbjct 354 KNKVDVRITDTTVEIFYNHNRIASH-RRLYGRSGQYSTVTEHMPQE----HQKYLEWNGD 408 Query 316 -CRHTAELVGPASQQVIAEFMRDNAIHH--LRSAQGVLGLRDKHGCDRLEAACARAIEV- 371 R A+ +G + +V+ + I RS G+L L +K+ ++LE CA+A+ Sbjct 409 RFRKWADSIGINTSKVVDAILTSGRIEQQSYRSCMGLLKLAEKYSPEKLEQVCAKALSYS 468 Query 372 GDPSYRTIKGILVAGTEHAANEPTTSSPASTAGGV 406 G PSY++IK +L A T+ A + + S A G+ Sbjct 469 GKPSYKSIKNLL-AATKDAPDTESESFQAVKPHGI 502 >gi|260177262|gb|ACX33981.1| IstA transposase IS21 family protein [uncultured bacterium RM44] Length=430 Score = 187 bits (474), Expect = 4e-45, Method: Compositional matrix adjust. Identities = 119/324 (37%), Positives = 160/324 (50%), Gaps = 7/324 (2%) Query 4 IAQRLRDDHGVAASESSVRRWIATHFAEEVARERVTVPRGPVDAGSEAQIDYGRLGMWFD 63 I + LR HG S SV R+I + R V R G +AQ+D+G +G +D Sbjct 99 IHRALRRSHGYGGSYGSVLRFIR----QLEPRVPEAVVRMETPPGRQAQVDFGSVGKMWD 154 Query 64 PATARRVAVWAFVMVLAFSRHLFVRPVIRMDQTAWCACHVAAFEFFDGVPARLVCDNLRT 123 PA W FVM L SRH+FVR V W CH AFE F GV +V DNL+ Sbjct 155 PAHKLMRTAWCFVMTLCCSRHMFVRFVFDQRIPTWLDCHRLAFEAFVGVVEEVVVDNLKA 214 Query 124 GVDKPDLYDPQINRSYAELASHYATLVDPARARKPKDKPRVERPMTYVRDSFWKGREFDS 183 V L DP ++ YA A HY LV P R R P+ K +VE + YV+ +F +F Sbjct 215 AVIAASLSDPLLSEPYARFARHYGFLVHPCRPRTPEHKGKVESSVHYVKRNFVASEQFID 274 Query 184 LAQMQQAAVTWSTEVAGLRYLRALEGAQPLRMFEAVEQQALIALPPRAFELTSWSIGTVG 243 + + A W +E AGLR + +P+++F VE+ L LP ++L T+ Sbjct 275 IDDANRKASLWVSEEAGLR-VHGTTHERPMQVFLEVERGVLRPLPRTPYDLEEVVRATLH 333 Query 244 VDTHLKVGKALYSVPWRLIGQRLHARTAGDVVQIFAGNDVVATHVR--RPSGRSTDFSHY 301 D H++V A YS PW IG+ L +V IF G ++ TH R R R T HY Sbjct 334 RDCHVQVLGAFYSAPWERIGKVLDVFVHHQIVTIFDGTLLLTTHERATRKGQRITRIEHY 393 Query 302 PPEKIAFHMRTPTWCRHTAELVGP 325 PPEK + RT +WC+ A +GP Sbjct 394 PPEKALYLTRTRSWCQGQASRIGP 417 >gi|332662476|ref|YP_004445264.1| integrase catalytic subunit [Haliscomenobacter hydrossis DSM 1100] gi|332664224|ref|YP_004447012.1| integrase catalytic subunit [Haliscomenobacter hydrossis DSM 1100] gi|332331290|gb|AEE48391.1| Integrase catalytic region [Haliscomenobacter hydrossis DSM 1100] gi|332333038|gb|AEE50139.1| Integrase catalytic region [Haliscomenobacter hydrossis DSM 1100] Length=483 Score = 186 bits (473), Expect = 5e-45, Method: Compositional matrix adjust. Identities = 130/406 (33%), Positives = 201/406 (50%), Gaps = 13/406 (3%) Query 4 IAQRLRDDHGVAASESSVRRWIATHFAEEVARERVTVPRGPVDAGSEAQIDYGRLGMWFD 63 I Q+L +HG+ S S+V R I + A+ + VP + AG EAQ+D+G LG+ FD Sbjct 76 IYQKLVKEHGLQTSYSTVNRTIRSLKADHES----FVPMQCL-AGEEAQVDFGYLGL-FD 129 Query 64 PATARRVAVWAFVMVLAFSRHLFVRPVIRMDQTAWCACHVAAFEFFDGVPARLVCDNLRT 123 A RV +W F VL+ SR + V + CH+ AFEFF GVP + DNL++ Sbjct 130 REGASRVKIWVFCAVLSHSRLGYFEAVTDQSVETFIRCHIHAFEFFCGVPRLVRLDNLKS 189 Query 124 GVDKPDLYDPQINRSYAELASHYATLVDPARARKPKDKPRVERPMTYVRDSFWKGREFDS 183 GV PD Y+P I YA +HY P R R P+ K +VE + YV+ +F G + + Sbjct 190 GVTTPDFYEPLIQEQYASFLAHYGAGAVPCRVRTPEHKGKVESGVKYVKKNFLLGLDQRN 249 Query 184 LAQMQQAAVTWSTEVAGLRYLRALEGAQPLRMFEAVEQQALIALPPRAFELTSWSIGTVG 243 + + TW+ VA R + PL+M++ VE+ AL LP + +E V Sbjct 250 FSSLSTDLRTWTDTVAN-RRVHGTTKRVPLQMWQQVEKSALGPLPAQRYEFYHVEERKVT 308 Query 244 VDTHLKVGKALYSVPWRLIGQRLHARTAGDVVQIFAGNDVVATH-VRRPSGRS-TDFSHY 301 H+ YSVP+ L+GQ L T G ++I VA H + G+ T H Sbjct 309 RFGHVIFRNNYYSVPYTLVGQTLRLFTNGTFLRISEQGQEVALHLLNNDKGQYVTQNGHL 368 Query 302 PPEKIAFHMRTPTWCRHTAELVGPASQQVIAEFMRDNAIHHLRSAQGVLGLRDKHGCDRL 361 P K + + + + +G ++ ++ +++ H A+G+L L +H R+ Sbjct 369 APHKQQHTLE--YYAQRLEQEIGTEARDLLLLIQQNHPSHWKDKARGLLQLCRRHPPQRV 426 Query 362 EAACARAIEVGDPSYRTIKGILVAGTEHAANEPTT-SSPASTAGGV 406 + AC +A++ G SYR+++ I +A EH T +PA AGG+ Sbjct 427 QEACRKALDNGISSYRSVRDICLA-LEHTPPISTHFEAPAPGAGGM 471 Lambda K H 0.322 0.134 0.418 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 819347350176 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40