BLASTP 2.2.25+


Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.



Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
           15,229,318 sequences; 5,219,829,388 total letters



Query= Rv3429

Length=178
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

gi|308232462|ref|ZP_07416100.2|  PPE family protein [Mycobacteriu...   369    8e-101
gi|15843022|ref|NP_338059.1|  PPE family protein [Mycobacterium t...   367    3e-100
gi|253800472|ref|YP_003033473.1|  PPE family protein [Mycobacteri...   364    2e-99 
gi|289747262|ref|ZP_06506640.1|  PPE family protein [Mycobacteriu...   363    8e-99 
gi|289445029|ref|ZP_06434773.1|  PPE family protein [Mycobacteriu...   361    2e-98 
gi|289763608|ref|ZP_06522986.1|  PPE family protein [Mycobacteriu...   360    3e-98 
gi|167968681|ref|ZP_02550958.1|  PPE family protein [Mycobacteriu...   360    5e-98 
gi|298526912|ref|ZP_07014321.1|  PPE family protein [Mycobacteriu...   359    1e-97 
gi|254552530|ref|ZP_05142977.1|  PPE family protein [Mycobacteriu...   353    6e-96 
gi|289444917|ref|ZP_06434661.1|  PPE family protein [Mycobacteriu...   323    5e-87 
gi|289752144|ref|ZP_06511522.1|  PPE family protein [Mycobacteriu...   322    2e-86 
gi|323717911|gb|EGB27100.1|  PPE family protein [Mycobacterium tu...   321    2e-86 
gi|339299856|gb|AEJ51966.1|  PPE family protein [Mycobacterium tu...   317    5e-85 
gi|148824631|ref|YP_001289385.1|  hypothetical protein TBFG_13458...   278    2e-73 
gi|31794606|ref|NP_857099.1|  PPE family protein [Mycobacterium b...   270    5e-71 
gi|289444916|ref|ZP_06434660.1|  PPE family protein [Mycobacteriu...   246    8e-64 
gi|148824632|ref|YP_001289386.1|  PPE family protein [Mycobacteri...   242    1e-62 
gi|57117105|ref|YP_177971.1|  PPE family protein [Mycobacterium t...   227    5e-58 
gi|289449124|ref|ZP_06438868.1|  PPE family protein [Mycobacteriu...   225    2e-57 
gi|289571657|ref|ZP_06451884.1|  PPE family protein [Mycobacteriu...   189    1e-46 
gi|148824635|ref|YP_001289389.1|  PPE family protein [Mycobacteri...   188    3e-46 
gi|306777764|ref|ZP_07416101.1|  putative PPE family protein [Myc...   181    4e-44 
gi|57117106|ref|YP_177972.1|  PPE family protein [Mycobacterium t...   176    9e-43 
gi|294995796|ref|ZP_06801487.1|  PPE family protein [Mycobacteriu...   167    4e-40 
gi|167968687|ref|ZP_02550964.1|  PPE family protein [Mycobacteriu...   156    1e-36 
gi|289759584|ref|ZP_06518962.1|  PPE family protein [Mycobacteriu...   123    1e-26 
gi|342861517|ref|ZP_08718164.1|  PPE family protein [Mycobacteriu...   101    4e-20 
gi|41409517|ref|NP_962353.1|  hypothetical protein MAP3419c [Myco...  95.1    4e-18 
gi|289747254|ref|ZP_06506632.1|  PPE family protein [Mycobacteriu...  94.7    4e-18 
gi|254776707|ref|ZP_05218223.1|  PPE family protein [Mycobacteriu...  94.7    5e-18 
gi|254820680|ref|ZP_05225681.1|  PPE family protein [Mycobacteriu...  94.0    8e-18 
gi|342861033|ref|ZP_08717682.1|  PPE family protein [Mycobacteriu...  93.2    1e-17 
gi|333989927|ref|YP_004522541.1|  PPE family protein PPE51_2 [Myc...  91.7    4e-17 
gi|296167733|ref|ZP_06849950.1|  PPE family protein [Mycobacteriu...  91.7    4e-17 
gi|240171260|ref|ZP_04749919.1|  PPE family protein [Mycobacteriu...  90.5    8e-17 
gi|240169037|ref|ZP_04747696.1|  PPE family protein [Mycobacteriu...  88.2    4e-16 
gi|183980225|ref|YP_001848516.1|  PPE family protein, PPE51_2 [My...  87.8    6e-16 
gi|340626377|ref|YP_004744829.1|  PPE family protein [Mycobacteri...  85.5    3e-15 
gi|289446957|ref|ZP_06436701.1|  PPE family protein [Mycobacteriu...  84.7    5e-15 
gi|339294339|gb|AEJ46450.1|  PPE family protein [Mycobacterium tu...  84.7    5e-15 
gi|289755661|ref|ZP_06515039.1|  PPE family protein [Mycobacteriu...  84.0    8e-15 
gi|298527010|ref|ZP_07014419.1|  ppe family protein [Mycobacteriu...  84.0    8e-15 
gi|240169296|ref|ZP_04747955.1|  PPE family protein [Mycobacteriu...  83.6    1e-14 
gi|289574028|ref|ZP_06454255.1|  PPE family protein [Mycobacteriu...  83.2    2e-14 
gi|306784092|ref|ZP_07422414.1|  PPE family protein [Mycobacteriu...  82.8    2e-14 
gi|289757466|ref|ZP_06516844.1|  PPE family protein [Mycobacteriu...  82.8    2e-14 
gi|57116852|ref|YP_177801.1|  PPE family protein [Mycobacterium t...  82.8    2e-14 
gi|308231818|ref|ZP_07413879.2|  PPE family protein [Mycobacteriu...  82.8    2e-14 
gi|253799589|ref|YP_003032590.1|  PPE family protein [Mycobacteri...  82.8    2e-14 
gi|308376701|ref|ZP_07439733.2|  PPE family protein [Mycobacteriu...  82.4    2e-14 


>gi|308232462|ref|ZP_07416100.2| PPE family protein [Mycobacterium tuberculosis SUMu001]
 gi|308370263|ref|ZP_07666905.1| PPE family protein [Mycobacterium tuberculosis SUMu002]
 gi|308371345|ref|ZP_07667143.1| PPE family protein [Mycobacterium tuberculosis SUMu003]
 7 more sequence titles
 
gi|308372544|ref|ZP_07667407.1| PPE family protein [Mycobacterium tuberculosis SUMu004]
 gi|308380698|ref|ZP_07669260.1| PPE family protein [Mycobacterium tuberculosis SUMu011]
 gi|308213940|gb|EFO73339.1| PPE family protein [Mycobacterium tuberculosis SUMu001]
 gi|308324885|gb|EFP13736.1| PPE family protein [Mycobacterium tuberculosis SUMu002]
 gi|308329067|gb|EFP17918.1| PPE family protein [Mycobacterium tuberculosis SUMu003]
 gi|308332928|gb|EFP21779.1| PPE family protein [Mycobacterium tuberculosis SUMu004]
 gi|308360714|gb|EFP49565.1| PPE family protein [Mycobacterium tuberculosis SUMu011]
Length=226

 Score =  369 bits (948),  Expect = 8e-101, Method: Compositional matrix adjust.
 Identities = 178/178 (100%), Positives = 178/178 (100%), Gaps = 0/178 (0%)

Query  1    MHPMIPAEYISNIIYEGPGADSLSAAAEQLRLMYNSANMTAKSLTDRLGELQENWKGSSS  60
            MHPMIPAEYISNIIYEGPGADSLSAAAEQLRLMYNSANMTAKSLTDRLGELQENWKGSSS
Sbjct  49   MHPMIPAEYISNIIYEGPGADSLSAAAEQLRLMYNSANMTAKSLTDRLGELQENWKGSSS  108

Query  61   DLMADAAGRYLDWLTKHSRQILETAYVIDFLAYVYEETRHKVVPPATIANNREEVHRLIA  120
            DLMADAAGRYLDWLTKHSRQILETAYVIDFLAYVYEETRHKVVPPATIANNREEVHRLIA
Sbjct  109  DLMADAAGRYLDWLTKHSRQILETAYVIDFLAYVYEETRHKVVPPATIANNREEVHRLIA  168

Query  121  SNVAGVNTPAIAGLDAQYQQYRAQNIAVMNDYQSTARFILAYLPRWQEPPQIYGGGGG  178
            SNVAGVNTPAIAGLDAQYQQYRAQNIAVMNDYQSTARFILAYLPRWQEPPQIYGGGGG
Sbjct  169  SNVAGVNTPAIAGLDAQYQQYRAQNIAVMNDYQSTARFILAYLPRWQEPPQIYGGGGG  226


>gi|15843022|ref|NP_338059.1| PPE family protein [Mycobacterium tuberculosis CDC1551]
 gi|57117107|ref|YP_177973.1| PPE family protein [Mycobacterium tuberculosis H37Rv]
 gi|148663293|ref|YP_001284816.1| PPE family protein [Mycobacterium tuberculosis H37Ra]
 20 more sequence titles
 
gi|148824638|ref|YP_001289392.1| PPE family protein [Mycobacterium tuberculosis F11]
 gi|254234025|ref|ZP_04927350.1| PPE family protein [Mycobacterium tuberculosis C]
 gi|254366034|ref|ZP_04982079.1| PPE family protein [Mycobacterium tuberculosis str. Haarlem]
 gi|289449131|ref|ZP_06438875.1| PPE family protein [Mycobacterium tuberculosis CPHL_A]
 gi|289576164|ref|ZP_06456391.1| PPE family protein [Mycobacterium tuberculosis K85]
 gi|306795209|ref|ZP_07433511.1| PPE family protein [Mycobacterium tuberculosis SUMu005]
 gi|306973893|ref|ZP_07486554.1| PPE family protein [Mycobacterium tuberculosis SUMu010]
 gi|339633434|ref|YP_004725076.1| PPE family protein [Mycobacterium africanum GM041182]
 gi|18201945|sp|O06246.1|PPE59_MYCTU RecName: Full=Uncharacterized PPE family protein PPE59
 gi|13883364|gb|AAK47873.1| PPE family protein [Mycobacterium tuberculosis CDC1551]
 gi|41352788|emb|CAE55598.1| PPE FAMILY PROTEIN [Mycobacterium tuberculosis H37Rv]
 gi|124599554|gb|EAY58658.1| PPE family protein [Mycobacterium tuberculosis C]
 gi|134151547|gb|EBA43592.1| PPE family protein [Mycobacterium tuberculosis str. Haarlem]
 gi|148507445|gb|ABQ75254.1| PPE family protein [Mycobacterium tuberculosis H37Ra]
 gi|148723165|gb|ABR07790.1| PPE family protein [Mycobacterium tuberculosis F11]
 gi|289422089|gb|EFD19290.1| PPE family protein [Mycobacterium tuberculosis CPHL_A]
 gi|289540595|gb|EFD45173.1| PPE family protein [Mycobacterium tuberculosis K85]
 gi|308336537|gb|EFP25388.1| PPE family protein [Mycobacterium tuberculosis SUMu005]
 gi|308356731|gb|EFP45582.1| PPE family protein [Mycobacterium tuberculosis SUMu010]
 gi|339332790|emb|CCC28513.1| PPE family protein [Mycobacterium africanum GM041182]
Length=178

 Score =  367 bits (943),  Expect = 3e-100, Method: Compositional matrix adjust.
 Identities = 178/178 (100%), Positives = 178/178 (100%), Gaps = 0/178 (0%)

Query  1    MHPMIPAEYISNIIYEGPGADSLSAAAEQLRLMYNSANMTAKSLTDRLGELQENWKGSSS  60
            MHPMIPAEYISNIIYEGPGADSLSAAAEQLRLMYNSANMTAKSLTDRLGELQENWKGSSS
Sbjct  1    MHPMIPAEYISNIIYEGPGADSLSAAAEQLRLMYNSANMTAKSLTDRLGELQENWKGSSS  60

Query  61   DLMADAAGRYLDWLTKHSRQILETAYVIDFLAYVYEETRHKVVPPATIANNREEVHRLIA  120
            DLMADAAGRYLDWLTKHSRQILETAYVIDFLAYVYEETRHKVVPPATIANNREEVHRLIA
Sbjct  61   DLMADAAGRYLDWLTKHSRQILETAYVIDFLAYVYEETRHKVVPPATIANNREEVHRLIA  120

Query  121  SNVAGVNTPAIAGLDAQYQQYRAQNIAVMNDYQSTARFILAYLPRWQEPPQIYGGGGG  178
            SNVAGVNTPAIAGLDAQYQQYRAQNIAVMNDYQSTARFILAYLPRWQEPPQIYGGGGG
Sbjct  121  SNVAGVNTPAIAGLDAQYQQYRAQNIAVMNDYQSTARFILAYLPRWQEPPQIYGGGGG  178


>gi|253800472|ref|YP_003033473.1| PPE family protein [Mycobacterium tuberculosis KZN 1435]
 gi|289555700|ref|ZP_06444910.1| PPE family protein [Mycobacterium tuberculosis KZN 605]
 gi|297636086|ref|ZP_06953866.1| PPE family protein [Mycobacterium tuberculosis KZN 4207]
 6 more sequence titles
 
gi|297733086|ref|ZP_06962204.1| PPE family protein [Mycobacterium tuberculosis KZN R506]
 gi|313660417|ref|ZP_07817297.1| PPE family protein [Mycobacterium tuberculosis KZN V2475]
 gi|253321975|gb|ACT26578.1| PPE family protein [Mycobacterium tuberculosis KZN 1435]
 gi|289440332|gb|EFD22825.1| PPE family protein [Mycobacterium tuberculosis KZN 605]
 gi|328460204|gb|AEB05627.1| PPE family protein [Mycobacterium tuberculosis KZN 4207]
 gi|344221265|gb|AEN01896.1| PPE family protein [Mycobacterium tuberculosis CTRI-2]
Length=178

 Score =  364 bits (935),  Expect = 2e-99, Method: Compositional matrix adjust.
 Identities = 177/178 (99%), Positives = 177/178 (99%), Gaps = 0/178 (0%)

Query  1    MHPMIPAEYISNIIYEGPGADSLSAAAEQLRLMYNSANMTAKSLTDRLGELQENWKGSSS  60
            MHPMIPAEYISNIIYEGPGADSLSAAAEQLRLMYNSANMTAKSLTDRLGELQENWKGSSS
Sbjct  1    MHPMIPAEYISNIIYEGPGADSLSAAAEQLRLMYNSANMTAKSLTDRLGELQENWKGSSS  60

Query  61   DLMADAAGRYLDWLTKHSRQILETAYVIDFLAYVYEETRHKVVPPATIANNREEVHRLIA  120
            DLMADAAGRYLDWLTKHSRQILETAYVIDFLAYVYEETRHKVVPPATIANNREEVHRLIA
Sbjct  61   DLMADAAGRYLDWLTKHSRQILETAYVIDFLAYVYEETRHKVVPPATIANNREEVHRLIA  120

Query  121  SNVAGVNTPAIAGLDAQYQQYRAQNIAVMNDYQSTARFILAYLPRWQEPPQIYGGGGG  178
            SNVAGVNTPAIAGLDAQYQQYRAQNIAVMNDYQSTARFILAYLPRWQEPPQIY GGGG
Sbjct  121  SNVAGVNTPAIAGLDAQYQQYRAQNIAVMNDYQSTARFILAYLPRWQEPPQIYRGGGG  178


>gi|289747262|ref|ZP_06506640.1| PPE family protein [Mycobacterium tuberculosis 02_1987]
 gi|289759591|ref|ZP_06518969.1| PPE family protein [Mycobacterium tuberculosis T85]
 gi|294995793|ref|ZP_06801484.1| PPE family protein [Mycobacterium tuberculosis 210]
 gi|289687790|gb|EFD55278.1| PPE family protein [Mycobacterium tuberculosis 02_1987]
 gi|289715155|gb|EFD79167.1| PPE family protein [Mycobacterium tuberculosis T85]
 gi|326905275|gb|EGE52208.1| PPE family protein [Mycobacterium tuberculosis W-148]
Length=178

 Score =  363 bits (931),  Expect = 8e-99, Method: Compositional matrix adjust.
 Identities = 176/178 (99%), Positives = 176/178 (99%), Gaps = 0/178 (0%)

Query  1    MHPMIPAEYISNIIYEGPGADSLSAAAEQLRLMYNSANMTAKSLTDRLGELQENWKGSSS  60
            MHPMIPAEYISNIIYEGPGADSL  AAEQLRLMYNSANMTAKSLTDRLGELQENWKGSSS
Sbjct  1    MHPMIPAEYISNIIYEGPGADSLFFAAEQLRLMYNSANMTAKSLTDRLGELQENWKGSSS  60

Query  61   DLMADAAGRYLDWLTKHSRQILETAYVIDFLAYVYEETRHKVVPPATIANNREEVHRLIA  120
            DLMADAAGRYLDWLTKHSRQILETAYVIDFLAYVYEETRHKVVPPATIANNREEVHRLIA
Sbjct  61   DLMADAAGRYLDWLTKHSRQILETAYVIDFLAYVYEETRHKVVPPATIANNREEVHRLIA  120

Query  121  SNVAGVNTPAIAGLDAQYQQYRAQNIAVMNDYQSTARFILAYLPRWQEPPQIYGGGGG  178
            SNVAGVNTPAIAGLDAQYQQYRAQNIAVMNDYQSTARFILAYLPRWQEPPQIYGGGGG
Sbjct  121  SNVAGVNTPAIAGLDAQYQQYRAQNIAVMNDYQSTARFILAYLPRWQEPPQIYGGGGG  178


>gi|289445029|ref|ZP_06434773.1| PPE family protein [Mycobacterium tuberculosis T46]
 gi|289571661|ref|ZP_06451888.1| PPE family protein [Mycobacterium tuberculosis T17]
 gi|289752153|ref|ZP_06511531.1| PPE family protein [Mycobacterium tuberculosis T92]
 gi|289755561|ref|ZP_06514939.1| PPE family protein [Mycobacterium tuberculosis EAS054]
 gi|289417948|gb|EFD15188.1| PPE family protein [Mycobacterium tuberculosis T46]
 gi|289545415|gb|EFD49063.1| PPE family protein [Mycobacterium tuberculosis T17]
 gi|289692740|gb|EFD60169.1| PPE family protein [Mycobacterium tuberculosis T92]
 gi|289696148|gb|EFD63577.1| PPE family protein [Mycobacterium tuberculosis EAS054]
Length=178

 Score =  361 bits (927),  Expect = 2e-98, Method: Compositional matrix adjust.
 Identities = 175/178 (99%), Positives = 176/178 (99%), Gaps = 0/178 (0%)

Query  1    MHPMIPAEYISNIIYEGPGADSLSAAAEQLRLMYNSANMTAKSLTDRLGELQENWKGSSS  60
            MHPMIPAEYISNIIYEGPGADSLSAAAEQLRLMYNSANMTAKSLTDRLGELQENWKGSSS
Sbjct  1    MHPMIPAEYISNIIYEGPGADSLSAAAEQLRLMYNSANMTAKSLTDRLGELQENWKGSSS  60

Query  61   DLMADAAGRYLDWLTKHSRQILETAYVIDFLAYVYEETRHKVVPPATIANNREEVHRLIA  120
            DL+ADAAGRYLDWLTKHSRQILETAYVIDFLAYVYEETRHKVVPPATIANNREEVHRLIA
Sbjct  61   DLLADAAGRYLDWLTKHSRQILETAYVIDFLAYVYEETRHKVVPPATIANNREEVHRLIA  120

Query  121  SNVAGVNTPAIAGLDAQYQQYRAQNIAVMNDYQSTARFILAYLPRWQEPPQIYGGGGG  178
            SNVAGVNTPAIA LDAQY QYRAQNIAVMNDYQSTARFILAYLPRWQEPPQIYGGGGG
Sbjct  121  SNVAGVNTPAIADLDAQYDQYRAQNIAVMNDYQSTARFILAYLPRWQEPPQIYGGGGG  178


>gi|289763608|ref|ZP_06522986.1| PPE family protein [Mycobacterium tuberculosis GM 1503]
 gi|289711114|gb|EFD75130.1| PPE family protein [Mycobacterium tuberculosis GM 1503]
Length=178

 Score =  360 bits (925),  Expect = 3e-98, Method: Compositional matrix adjust.
 Identities = 175/178 (99%), Positives = 175/178 (99%), Gaps = 0/178 (0%)

Query  1    MHPMIPAEYISNIIYEGPGADSLSAAAEQLRLMYNSANMTAKSLTDRLGELQENWKGSSS  60
            MHPMIPAEYISNIIYEGPGADSLSAAAEQLRLMYNSANMTAKSLTDRLGELQENWKGSSS
Sbjct  1    MHPMIPAEYISNIIYEGPGADSLSAAAEQLRLMYNSANMTAKSLTDRLGELQENWKGSSS  60

Query  61   DLMADAAGRYLDWLTKHSRQILETAYVIDFLAYVYEETRHKVVPPATIANNREEVHRLIA  120
            DLMADA  RYL WLTKHSRQILETAYVIDFLAYVYEETRHKVVPPATIANNREEVHRLIA
Sbjct  61   DLMADAVERYLQWLTKHSRQILETAYVIDFLAYVYEETRHKVVPPATIANNREEVHRLIA  120

Query  121  SNVAGVNTPAIAGLDAQYQQYRAQNIAVMNDYQSTARFILAYLPRWQEPPQIYGGGGG  178
            SNVAGVNTPAIAGLDAQYQQYRAQNIAVMNDYQSTARFILAYLPRWQEPPQIYGGGGG
Sbjct  121  SNVAGVNTPAIAGLDAQYQQYRAQNIAVMNDYQSTARFILAYLPRWQEPPQIYGGGGG  178


>gi|167968681|ref|ZP_02550958.1| PPE family protein [Mycobacterium tuberculosis H37Ra]
Length=175

 Score =  360 bits (923),  Expect = 5e-98, Method: Compositional matrix adjust.
 Identities = 175/175 (100%), Positives = 175/175 (100%), Gaps = 0/175 (0%)

Query  4    MIPAEYISNIIYEGPGADSLSAAAEQLRLMYNSANMTAKSLTDRLGELQENWKGSSSDLM  63
            MIPAEYISNIIYEGPGADSLSAAAEQLRLMYNSANMTAKSLTDRLGELQENWKGSSSDLM
Sbjct  1    MIPAEYISNIIYEGPGADSLSAAAEQLRLMYNSANMTAKSLTDRLGELQENWKGSSSDLM  60

Query  64   ADAAGRYLDWLTKHSRQILETAYVIDFLAYVYEETRHKVVPPATIANNREEVHRLIASNV  123
            ADAAGRYLDWLTKHSRQILETAYVIDFLAYVYEETRHKVVPPATIANNREEVHRLIASNV
Sbjct  61   ADAAGRYLDWLTKHSRQILETAYVIDFLAYVYEETRHKVVPPATIANNREEVHRLIASNV  120

Query  124  AGVNTPAIAGLDAQYQQYRAQNIAVMNDYQSTARFILAYLPRWQEPPQIYGGGGG  178
            AGVNTPAIAGLDAQYQQYRAQNIAVMNDYQSTARFILAYLPRWQEPPQIYGGGGG
Sbjct  121  AGVNTPAIAGLDAQYQQYRAQNIAVMNDYQSTARFILAYLPRWQEPPQIYGGGGG  175


>gi|298526912|ref|ZP_07014321.1| PPE family protein [Mycobacterium tuberculosis 94_M4241A]
 gi|298496706|gb|EFI32000.1| PPE family protein [Mycobacterium tuberculosis 94_M4241A]
Length=178

 Score =  359 bits (921),  Expect = 1e-97, Method: Compositional matrix adjust.
 Identities = 174/178 (98%), Positives = 174/178 (98%), Gaps = 0/178 (0%)

Query  1    MHPMIPAEYISNIIYEGPGADSLSAAAEQLRLMYNSANMTAKSLTDRLGELQENWKGSSS  60
            MHPMIPAEYISNIIYEGPGADSL  AAEQLRLMYNSANMTAKSLTDRLGELQENWKGSSS
Sbjct  1    MHPMIPAEYISNIIYEGPGADSLFFAAEQLRLMYNSANMTAKSLTDRLGELQENWKGSSS  60

Query  61   DLMADAAGRYLDWLTKHSRQILETAYVIDFLAYVYEETRHKVVPPATIANNREEVHRLIA  120
            DLMADA  RYLDWLTKHSRQILETAYVIDFLAYVYEETRHKVVPPATIANNREEVHRLIA
Sbjct  61   DLMADAVERYLDWLTKHSRQILETAYVIDFLAYVYEETRHKVVPPATIANNREEVHRLIA  120

Query  121  SNVAGVNTPAIAGLDAQYQQYRAQNIAVMNDYQSTARFILAYLPRWQEPPQIYGGGGG  178
            SNVAGVNTPAIAGLDAQYQQYRAQNIAVMNDYQSTARFILAYLPRWQEPPQIYGGGGG
Sbjct  121  SNVAGVNTPAIAGLDAQYQQYRAQNIAVMNDYQSTARFILAYLPRWQEPPQIYGGGGG  178


>gi|254552530|ref|ZP_05142977.1| PPE family protein [Mycobacterium tuberculosis '98-R604 INH-RIF-EM']
Length=175

 Score =  353 bits (906),  Expect = 6e-96, Method: Compositional matrix adjust.
 Identities = 172/175 (99%), Positives = 172/175 (99%), Gaps = 0/175 (0%)

Query  4    MIPAEYISNIIYEGPGADSLSAAAEQLRLMYNSANMTAKSLTDRLGELQENWKGSSSDLM  63
            MIPAEYISNIIYEGPGADSLSAAAEQLRLMYNSANMTAKSLTDRLGELQENWKGSSSDLM
Sbjct  1    MIPAEYISNIIYEGPGADSLSAAAEQLRLMYNSANMTAKSLTDRLGELQENWKGSSSDLM  60

Query  64   ADAAGRYLDWLTKHSRQILETAYVIDFLAYVYEETRHKVVPPATIANNREEVHRLIASNV  123
            ADA  RYL WLTKHSRQILETAYVIDFLAYVYEETRHKVVPPATIANNREEVHRLIASNV
Sbjct  61   ADAVERYLQWLTKHSRQILETAYVIDFLAYVYEETRHKVVPPATIANNREEVHRLIASNV  120

Query  124  AGVNTPAIAGLDAQYQQYRAQNIAVMNDYQSTARFILAYLPRWQEPPQIYGGGGG  178
            AGVNTPAIAGLDAQYQQYRAQNIAVMNDYQSTARFILAYLPRWQEPPQIYGGGGG
Sbjct  121  AGVNTPAIAGLDAQYQQYRAQNIAVMNDYQSTARFILAYLPRWQEPPQIYGGGGG  175


>gi|289444917|ref|ZP_06434661.1| PPE family protein [Mycobacterium tuberculosis T46]
 gi|289571650|ref|ZP_06451877.1| PPE family protein [Mycobacterium tuberculosis T17]
 gi|289755554|ref|ZP_06514932.1| PPE family protein [Mycobacterium tuberculosis EAS054]
 gi|289417836|gb|EFD15076.1| PPE family protein [Mycobacterium tuberculosis T46]
 gi|289545404|gb|EFD49052.1| PPE family protein [Mycobacterium tuberculosis T17]
 gi|289696141|gb|EFD63570.1| PPE family protein [Mycobacterium tuberculosis EAS054]
Length=176

 Score =  323 bits (829),  Expect = 5e-87, Method: Compositional matrix adjust.
 Identities = 159/176 (91%), Positives = 164/176 (94%), Gaps = 0/176 (0%)

Query  1    MHPMIPAEYISNIIYEGPGADSLSAAAEQLRLMYNSANMTAKSLTDRLGELQENWKGSSS  60
            MHPMIPAEYISNIIYEGPGADSLSAAAEQLRLMYNSANMTAKSLTDRLGELQENWKGSSS
Sbjct  1    MHPMIPAEYISNIIYEGPGADSLSAAAEQLRLMYNSANMTAKSLTDRLGELQENWKGSSS  60

Query  61   DLMADAAGRYLDWLTKHSRQILETAYVIDFLAYVYEETRHKVVPPATIANNREEVHRLIA  120
            DL+ADAAGRYLDWLTKHSRQILETAYVIDFLAYVYEETRHKVVPPATIANNREE  RLIA
Sbjct  61   DLLADAAGRYLDWLTKHSRQILETAYVIDFLAYVYEETRHKVVPPATIANNREERRRLIA  120

Query  121  SNVAGVNTPAIAGLDAQYQQYRAQNIAVMNDYQSTARFILAYLPRWQEPPQIYGGG  176
            SNVAGVNTPAIA LDAQY QYRA+N+AVMN Y S  R  L+ LPRW+EPPQIY GG
Sbjct  121  SNVAGVNTPAIADLDAQYDQYRARNVAVMNAYVSWTRSALSDLPRWREPPQIYRGG  176


>gi|289752144|ref|ZP_06511522.1| PPE family protein [Mycobacterium tuberculosis T92]
 gi|289692731|gb|EFD60160.1| PPE family protein [Mycobacterium tuberculosis T92]
Length=176

 Score =  322 bits (824),  Expect = 2e-86, Method: Compositional matrix adjust.
 Identities = 158/176 (90%), Positives = 163/176 (93%), Gaps = 0/176 (0%)

Query  1    MHPMIPAEYISNIIYEGPGADSLSAAAEQLRLMYNSANMTAKSLTDRLGELQENWKGSSS  60
            MHPMIPAEYISNIIYEGPGADSLSAAAEQLRLMYNSANMTAKSLTDRLGELQENWKGSSS
Sbjct  1    MHPMIPAEYISNIIYEGPGADSLSAAAEQLRLMYNSANMTAKSLTDRLGELQENWKGSSS  60

Query  61   DLMADAAGRYLDWLTKHSRQILETAYVIDFLAYVYEETRHKVVPPATIANNREEVHRLIA  120
            DL+ADAAGRYLDWLTKHSRQILETAYVIDFLAYVYEETRHKVVPPATIANNREE  RLIA
Sbjct  61   DLLADAAGRYLDWLTKHSRQILETAYVIDFLAYVYEETRHKVVPPATIANNREERRRLIA  120

Query  121  SNVAGVNTPAIAGLDAQYQQYRAQNIAVMNDYQSTARFILAYLPRWQEPPQIYGGG  176
            SNVAGVN PAIA LDAQY QYRA+N+AVMN Y S  R  L+ LPRW+EPPQIY GG
Sbjct  121  SNVAGVNAPAIADLDAQYDQYRARNVAVMNAYVSWTRSALSDLPRWREPPQIYRGG  176


>gi|323717911|gb|EGB27100.1| PPE family protein [Mycobacterium tuberculosis CDC1551A]
Length=156

 Score =  321 bits (823),  Expect = 2e-86, Method: Compositional matrix adjust.
 Identities = 155/156 (99%), Positives = 156/156 (100%), Gaps = 0/156 (0%)

Query  23   LSAAAEQLRLMYNSANMTAKSLTDRLGELQENWKGSSSDLMADAAGRYLDWLTKHSRQIL  82
            +SAAAEQLRLMYNSANMTAKSLTDRLGELQENWKGSSSDLMADAAGRYLDWLTKHSRQIL
Sbjct  1    MSAAAEQLRLMYNSANMTAKSLTDRLGELQENWKGSSSDLMADAAGRYLDWLTKHSRQIL  60

Query  83   ETAYVIDFLAYVYEETRHKVVPPATIANNREEVHRLIASNVAGVNTPAIAGLDAQYQQYR  142
            ETAYVIDFLAYVYEETRHKVVPPATIANNREEVHRLIASNVAGVNTPAIAGLDAQYQQYR
Sbjct  61   ETAYVIDFLAYVYEETRHKVVPPATIANNREEVHRLIASNVAGVNTPAIAGLDAQYQQYR  120

Query  143  AQNIAVMNDYQSTARFILAYLPRWQEPPQIYGGGGG  178
            AQNIAVMNDYQSTARFILAYLPRWQEPPQIYGGGGG
Sbjct  121  AQNIAVMNDYQSTARFILAYLPRWQEPPQIYGGGGG  156


>gi|339299856|gb|AEJ51966.1| PPE family protein [Mycobacterium tuberculosis CCDC5180]
Length=156

 Score =  317 bits (812),  Expect = 5e-85, Method: Compositional matrix adjust.
 Identities = 153/153 (100%), Positives = 153/153 (100%), Gaps = 0/153 (0%)

Query  26   AAEQLRLMYNSANMTAKSLTDRLGELQENWKGSSSDLMADAAGRYLDWLTKHSRQILETA  85
            AAEQLRLMYNSANMTAKSLTDRLGELQENWKGSSSDLMADAAGRYLDWLTKHSRQILETA
Sbjct  4    AAEQLRLMYNSANMTAKSLTDRLGELQENWKGSSSDLMADAAGRYLDWLTKHSRQILETA  63

Query  86   YVIDFLAYVYEETRHKVVPPATIANNREEVHRLIASNVAGVNTPAIAGLDAQYQQYRAQN  145
            YVIDFLAYVYEETRHKVVPPATIANNREEVHRLIASNVAGVNTPAIAGLDAQYQQYRAQN
Sbjct  64   YVIDFLAYVYEETRHKVVPPATIANNREEVHRLIASNVAGVNTPAIAGLDAQYQQYRAQN  123

Query  146  IAVMNDYQSTARFILAYLPRWQEPPQIYGGGGG  178
            IAVMNDYQSTARFILAYLPRWQEPPQIYGGGGG
Sbjct  124  IAVMNDYQSTARFILAYLPRWQEPPQIYGGGGG  156


>gi|148824631|ref|YP_001289385.1| hypothetical protein TBFG_13458 [Mycobacterium tuberculosis F11]
 gi|148723158|gb|ABR07783.1| hypothetical protein TBFG_13458 [Mycobacterium tuberculosis F11]
Length=176

 Score =  278 bits (712),  Expect = 2e-73, Method: Compositional matrix adjust.
 Identities = 139/176 (79%), Positives = 148/176 (85%), Gaps = 0/176 (0%)

Query  1    MHPMIPAEYISNIIYEGPGADSLSAAAEQLRLMYNSANMTAKSLTDRLGELQENWKGSSS  60
            MHPMIPAEYISNIIYEGPGADSLSAAAEQLRLMYNSANMTAKSLTDRLGELQENWKGSSS
Sbjct  1    MHPMIPAEYISNIIYEGPGADSLSAAAEQLRLMYNSANMTAKSLTDRLGELQENWKGSSS  60

Query  61   DLMADAAGRYLDWLTKHSRQILETAYVIDFLAYVYEETRHKVVPPATIANNREEVHRLIA  120
            DLMADA  RYL WL+KHS Q+   A+VI+ LA  Y +TR KVVPP  IA NREE  RLIA
Sbjct  61   DLMADAVERYLQWLSKHSSQLKHAAWVINGLANAYNDTRRKVVPPEEIAANREERRRLIA  120

Query  121  SNVAGVNTPAIAGLDAQYQQYRAQNIAVMNDYQSTARFILAYLPRWQEPPQIYGGG  176
            SNVAGVN PAIA LDAQY QYRA+N+AVMN Y S  R  L+ LPRW+EPPQIY GG
Sbjct  121  SNVAGVNAPAIADLDAQYDQYRARNVAVMNAYVSWTRSALSDLPRWREPPQIYRGG  176


>gi|31794606|ref|NP_857099.1| PPE family protein [Mycobacterium bovis AF2122/97]
 gi|121639350|ref|YP_979574.1| PPE family protein [Mycobacterium bovis BCG str. Pasteur 1173P2]
 gi|224991846|ref|YP_002646535.1| PPE family protein [Mycobacterium bovis BCG str. Tokyo 172]
 gi|31620203|emb|CAD95646.1| PPE FAMILY PROTEIN [Mycobacterium bovis AF2122/97]
 gi|121494998|emb|CAL73484.1| PPE family protein [Mycobacterium bovis BCG str. Pasteur 1173P2]
 gi|224774961|dbj|BAH27767.1| PPE family protein [Mycobacterium bovis BCG str. Tokyo 172]
 gi|341603371|emb|CCC66052.1| PPE family protein [Mycobacterium bovis BCG str. Moreau RDJ]
Length=178

 Score =  270 bits (690),  Expect = 5e-71, Method: Compositional matrix adjust.
 Identities = 141/178 (80%), Positives = 150/178 (85%), Gaps = 0/178 (0%)

Query  1    MHPMIPAEYISNIIYEGPGADSLSAAAEQLRLMYNSANMTAKSLTDRLGELQENWKGSSS  60
            MHPMIPAEYISNIIYEGPGADSL  A+ QLR +  S   TA+SL D L EL ENWKGSSS
Sbjct  1    MHPMIPAEYISNIIYEGPGADSLFFASGQLRELAYSVETTAESLEDELDELDENWKGSSS  60

Query  61   DLMADAAGRYLDWLTKHSRQILETAYVIDFLAYVYEETRHKVVPPATIANNREEVHRLIA  120
            DL+ADA  RYL WL+KHS Q+   A+VI+ LA  Y +TR KVVPP  IA NREEVHRLIA
Sbjct  61   DLLADAVERYLQWLSKHSSQLKHAAWVINGLANAYNDTRRKVVPPEEIAANREEVHRLIA  120

Query  121  SNVAGVNTPAIAGLDAQYQQYRAQNIAVMNDYQSTARFILAYLPRWQEPPQIYGGGGG  178
            SNVAGVNTPAIAGLDAQYQQYRAQNIAVMNDYQSTARFILAYLPRWQEPPQIYGGGGG
Sbjct  121  SNVAGVNTPAIAGLDAQYQQYRAQNIAVMNDYQSTARFILAYLPRWQEPPQIYGGGGG  178


>gi|289444916|ref|ZP_06434660.1| PPE family protein [Mycobacterium tuberculosis T46]
 gi|289571651|ref|ZP_06451878.1| PPE family protein [Mycobacterium tuberculosis T17]
 gi|289576158|ref|ZP_06456385.1| PPE family protein [Mycobacterium tuberculosis K85]
 14 more sequence titles
 
gi|289752145|ref|ZP_06511523.1| PPE family protein [Mycobacterium tuberculosis T92]
 gi|289755555|ref|ZP_06514933.1| PPE family protein [Mycobacterium tuberculosis EAS054]
 gi|289759585|ref|ZP_06518963.1| PPE family protein [Mycobacterium tuberculosis T85]
 gi|294995801|ref|ZP_06801492.1| PPE family protein [Mycobacterium tuberculosis 210]
 gi|298526908|ref|ZP_07014317.1| PPE family protein [Mycobacterium tuberculosis 94_M4241A]
 gi|289417835|gb|EFD15075.1| PPE family protein [Mycobacterium tuberculosis T46]
 gi|289540589|gb|EFD45167.1| PPE family protein [Mycobacterium tuberculosis K85]
 gi|289545405|gb|EFD49053.1| PPE family protein [Mycobacterium tuberculosis T17]
 gi|289692732|gb|EFD60161.1| PPE family protein [Mycobacterium tuberculosis T92]
 gi|289696142|gb|EFD63571.1| PPE family protein [Mycobacterium tuberculosis EAS054]
 gi|289715149|gb|EFD79161.1| PPE family protein [Mycobacterium tuberculosis T85]
 gi|298496702|gb|EFI31996.1| PPE family protein [Mycobacterium tuberculosis 94_M4241A]
 gi|305662420|gb|ADM62324.1| PPE58 [Mycobacterium tuberculosis]
 gi|305662425|gb|ADM62328.1| PPE58 [Mycobacterium tuberculosis]
Length=176

 Score =  246 bits (629),  Expect = 8e-64, Method: Compositional matrix adjust.
 Identities = 123/176 (70%), Positives = 140/176 (80%), Gaps = 0/176 (0%)

Query  1    MHPMIPAEYISNIIYEGPGADSLSAAAEQLRLMYNSANMTAKSLTDRLGELQENWKGSSS  60
            MH MIPAEYISN+IYEGP ADSL AA ++LR + +S   TA+SL   L EL ENWKGSSS
Sbjct  1    MHLMIPAEYISNVIYEGPRADSLYAADQRLRQLADSVRTTAESLNTTLDELHENWKGSSS  60

Query  61   DLMADAAGRYLDWLTKHSRQILETAYVIDFLAYVYEETRHKVVPPATIANNREEVHRLIA  120
            + MADAA RYLDWL+KHSRQIL TA VI+ L   YEET  +VVPPATIANNREEV RLIA
Sbjct  61   EWMADAALRYLDWLSKHSRQILRTARVIESLVMAYEETLLRVVPPATIANNREEVRRLIA  120

Query  121  SNVAGVNTPAIAGLDAQYQQYRAQNIAVMNDYQSTARFILAYLPRWQEPPQIYGGG  176
            SNVAGVNTPAIA L+AQY+QYRA+NI  M+ Y S  RF L+ LPRW+EPPQI+  G
Sbjct  121  SNVAGVNTPAIADLEAQYEQYRAENIQAMDRYLSWTRFALSKLPRWREPPQIHRSG  176


>gi|148824632|ref|YP_001289386.1| PPE family protein [Mycobacterium tuberculosis F11]
 gi|289747255|ref|ZP_06506633.1| PPE family protein [Mycobacterium tuberculosis 02_1987]
 gi|148723159|gb|ABR07784.1| PPE family protein [Mycobacterium tuberculosis F11]
 gi|289687783|gb|EFD55271.1| PPE family protein [Mycobacterium tuberculosis 02_1987]
 gi|339296248|gb|AEJ48359.1| PPE family protein [Mycobacterium tuberculosis CCDC5079]
 gi|339299850|gb|AEJ51960.1| PPE family protein [Mycobacterium tuberculosis CCDC5180]
Length=173

 Score =  242 bits (618),  Expect = 1e-62, Method: Compositional matrix adjust.
 Identities = 121/173 (70%), Positives = 138/173 (80%), Gaps = 0/173 (0%)

Query  4    MIPAEYISNIIYEGPGADSLSAAAEQLRLMYNSANMTAKSLTDRLGELQENWKGSSSDLM  63
            MIPAEYISN+IYEGP ADSL AA ++LR + +S   TA+SL   L EL ENWKGSSS+ M
Sbjct  1    MIPAEYISNVIYEGPRADSLYAADQRLRQLADSVRTTAESLNTTLDELHENWKGSSSEWM  60

Query  64   ADAAGRYLDWLTKHSRQILETAYVIDFLAYVYEETRHKVVPPATIANNREEVHRLIASNV  123
            ADAA RYLDWL+KHSRQIL TA VI+ L   YEET  +VVPPATIANNREEV RLIASNV
Sbjct  61   ADAALRYLDWLSKHSRQILRTARVIESLVMAYEETLLRVVPPATIANNREEVRRLIASNV  120

Query  124  AGVNTPAIAGLDAQYQQYRAQNIAVMNDYQSTARFILAYLPRWQEPPQIYGGG  176
            AGVNTPAIA L+AQY+QYRA+NI  M+ Y S  RF L+ LPRW+EPPQI+  G
Sbjct  121  AGVNTPAIADLEAQYEQYRAENIQAMDRYLSWTRFALSKLPRWREPPQIHRSG  173


>gi|57117105|ref|YP_177971.1| PPE family protein [Mycobacterium tuberculosis H37Rv]
 gi|148663289|ref|YP_001284812.1| PPE family protein [Mycobacterium tuberculosis H37Ra]
 gi|306973883|ref|ZP_07486544.1| putative PPE family protein [Mycobacterium tuberculosis SUMu010]
 6 more sequence titles
 
gi|307081595|ref|ZP_07490765.1| putative PPE family protein [Mycobacterium tuberculosis SUMu011]
 gi|2496465|sp|Q50703.1|PPE57_MYCTU RecName: Full=Uncharacterized PPE family protein PPE57
 gi|41352786|emb|CAE55596.1| PPE FAMILY PROTEIN [Mycobacterium tuberculosis H37Rv]
 gi|148507441|gb|ABQ75250.1| PPE family protein [Mycobacterium tuberculosis H37Ra]
 gi|308356769|gb|EFP45620.1| putative PPE family protein [Mycobacterium tuberculosis SUMu010]
 gi|308360719|gb|EFP49570.1| putative PPE family protein [Mycobacterium tuberculosis SUMu011]
Length=176

 Score =  227 bits (579),  Expect = 5e-58, Method: Compositional matrix adjust.
 Identities = 123/176 (70%), Positives = 136/176 (78%), Gaps = 0/176 (0%)

Query  1    MHPMIPAEYISNIIYEGPGADSLSAAAEQLRLMYNSANMTAKSLTDRLGELQENWKGSSS  60
            MHPMIPAEYISNIIYEGPGADSL  A+ QLR +  S   TA+SL D L EL ENWKGSSS
Sbjct  1    MHPMIPAEYISNIIYEGPGADSLFFASGQLRELAYSVETTAESLEDELDELDENWKGSSS  60

Query  61   DLMADAAGRYLDWLTKHSRQILETAYVIDFLAYVYEETRHKVVPPATIANNREEVHRLIA  120
            DL+ADA  RYL WL+KHS Q+   A+VI+ LA  Y +TR KVVPP  IA NREE  RLIA
Sbjct  61   DLLADAVERYLQWLSKHSSQLKHAAWVINGLANAYNDTRRKVVPPEEIAANREERRRLIA  120

Query  121  SNVAGVNTPAIAGLDAQYQQYRAQNIAVMNDYQSTARFILAYLPRWQEPPQIYGGG  176
            SNVAGVNTPAIA LDAQY QYRA+N+AVMN Y S  R  L+ LPRW+EPPQIY GG
Sbjct  121  SNVAGVNTPAIADLDAQYDQYRARNVAVMNAYVSWTRSALSDLPRWREPPQIYRGG  176


>gi|289449124|ref|ZP_06438868.1| PPE family protein [Mycobacterium tuberculosis CPHL_A]
 gi|289576157|ref|ZP_06456384.1| PPE family protein [Mycobacterium tuberculosis K85]
 gi|298526907|ref|ZP_07014316.1| PPE family protein [Mycobacterium tuberculosis 94_M4241A]
 gi|339633430|ref|YP_004725072.1| PPE family protein [Mycobacterium africanum GM041182]
 gi|289422082|gb|EFD19283.1| PPE family protein [Mycobacterium tuberculosis CPHL_A]
 gi|289540588|gb|EFD45166.1| PPE family protein [Mycobacterium tuberculosis K85]
 gi|298496701|gb|EFI31995.1| PPE family protein [Mycobacterium tuberculosis 94_M4241A]
 gi|339332786|emb|CCC28508.1| PPE family protein [Mycobacterium africanum GM041182]
Length=176

 Score =  225 bits (574),  Expect = 2e-57, Method: Compositional matrix adjust.
 Identities = 122/176 (70%), Positives = 135/176 (77%), Gaps = 0/176 (0%)

Query  1    MHPMIPAEYISNIIYEGPGADSLSAAAEQLRLMYNSANMTAKSLTDRLGELQENWKGSSS  60
            MHPMIPAEYISNIIYEGPGADSL  A+ QLR +  S   TA+SL D L EL ENWKGSSS
Sbjct  1    MHPMIPAEYISNIIYEGPGADSLFFASGQLRELAYSVETTAESLEDELDELDENWKGSSS  60

Query  61   DLMADAAGRYLDWLTKHSRQILETAYVIDFLAYVYEETRHKVVPPATIANNREEVHRLIA  120
            DL+ADA  RYL WL+KHS Q+   A+VI+ LA  Y +TR KVVPP  IA NREE  RLIA
Sbjct  61   DLLADAVERYLQWLSKHSSQLKHAAWVINGLANAYNDTRRKVVPPEEIAANREERRRLIA  120

Query  121  SNVAGVNTPAIAGLDAQYQQYRAQNIAVMNDYQSTARFILAYLPRWQEPPQIYGGG  176
            SNVAGVN PAIA LDAQY QYRA+N+AVMN Y S  R  L+ LPRW+EPPQIY GG
Sbjct  121  SNVAGVNAPAIADLDAQYDQYRARNVAVMNAYVSWTRSALSDLPRWREPPQIYRGG  176


>gi|289571657|ref|ZP_06451884.1| PPE family protein [Mycobacterium tuberculosis T17]
 gi|298526911|ref|ZP_07014320.1| ppe family protein [Mycobacterium tuberculosis 94_M4241A]
 gi|289545411|gb|EFD49059.1| PPE family protein [Mycobacterium tuberculosis T17]
 gi|298496705|gb|EFI31999.1| ppe family protein [Mycobacterium tuberculosis 94_M4241A]
 gi|326905273|gb|EGE52206.1| PPE family protein [Mycobacterium tuberculosis W-148]
Length=176

 Score =  189 bits (481),  Expect = 1e-46, Method: Compositional matrix adjust.
 Identities = 96/175 (55%), Positives = 119/175 (68%), Gaps = 0/175 (0%)

Query  4    MIPAEYISNIIYEGPGADSLSAAAEQLRLMYNSANMTAKSLTDRLGELQENWKGSSSDLM  63
            M PA  IS  +Y GPGADS+ AA++QLR +  SA+ TA SL D L +L + W G SS  M
Sbjct  1    MTPAHQISYQMYAGPGADSMRAASQQLRELAFSADTTADSLNDTLFDLDDTWIGGSSAFM  60

Query  64   ADAAGRYLDWLTKHSRQILETAYVIDFLAYVYEETRHKVVPPATIANNREEVHRLIASNV  123
             DAA RYL WL+KHS+++ +TA  I  LA  YE+ R +VVPPA I +NREEV RLIAS++
Sbjct  61   TDAALRYLKWLSKHSKRLWQTANTIHHLANTYEDIRQRVVPPAAIEDNREEVRRLIASDI  120

Query  124  AGVNTPAIAGLDAQYQQYRAQNIAVMNDYQSTARFILAYLPRWQEPPQIYGGGGG  178
             G N PAIA LD QYQ Y   N+  MN Y   A+ +L+ LPRWQEPPQI+  G G
Sbjct  121  TGENAPAIAELDEQYQSYGDTNVQAMNLYAERAQTLLSQLPRWQEPPQIHQRGRG  175


>gi|148824635|ref|YP_001289389.1| PPE family protein [Mycobacterium tuberculosis F11]
 gi|289445026|ref|ZP_06434770.1| PPE family protein [Mycobacterium tuberculosis T46]
 gi|289449128|ref|ZP_06438872.1| PPE family protein [Mycobacterium tuberculosis CPHL_A]
 20 more sequence titles
 
gi|289576161|ref|ZP_06456388.1| PPE family protein [Mycobacterium tuberculosis K85]
 gi|289747259|ref|ZP_06506637.1| PPE family protein [Mycobacterium tuberculosis 02_1987]
 gi|289752149|ref|ZP_06511527.1| PPE family protein [Mycobacterium tuberculosis T92]
 gi|289755559|ref|ZP_06514937.1| PPE family protein [Mycobacterium tuberculosis EAS054]
 gi|289759590|ref|ZP_06518968.1| PPE family protein [Mycobacterium tuberculosis T85]
 gi|306777771|ref|ZP_07416108.1| putative PPE family protein [Mycobacterium tuberculosis SUMu001]
 gi|306973890|ref|ZP_07486551.1| putative PPE family protein [Mycobacterium tuberculosis SUMu010]
 gi|307081602|ref|ZP_07490772.1| putative PPE family protein [Mycobacterium tuberculosis SUMu011]
 gi|148723162|gb|ABR07787.1| PPE family protein [Mycobacterium tuberculosis F11]
 gi|289417945|gb|EFD15185.1| PPE family protein [Mycobacterium tuberculosis T46]
 gi|289422086|gb|EFD19287.1| PPE family protein [Mycobacterium tuberculosis CPHL_A]
 gi|289540592|gb|EFD45170.1| PPE family protein [Mycobacterium tuberculosis K85]
 gi|289687787|gb|EFD55275.1| PPE family protein [Mycobacterium tuberculosis 02_1987]
 gi|289692736|gb|EFD60165.1| PPE family protein [Mycobacterium tuberculosis T92]
 gi|289696146|gb|EFD63575.1| PPE family protein [Mycobacterium tuberculosis EAS054]
 gi|289715154|gb|EFD79166.1| PPE family protein [Mycobacterium tuberculosis T85]
 gi|308213904|gb|EFO73303.1| putative PPE family protein [Mycobacterium tuberculosis SUMu001]
 gi|308356774|gb|EFP45625.1| putative PPE family protein [Mycobacterium tuberculosis SUMu010]
 gi|308360723|gb|EFP49574.1| putative PPE family protein [Mycobacterium tuberculosis SUMu011]
 gi|339299854|gb|AEJ51964.1| PPE family protein [Mycobacterium tuberculosis CCDC5180]
Length=180

 Score =  188 bits (477),  Expect = 3e-46, Method: Compositional matrix adjust.
 Identities = 95/175 (55%), Positives = 119/175 (68%), Gaps = 0/175 (0%)

Query  4    MIPAEYISNIIYEGPGADSLSAAAEQLRLMYNSANMTAKSLTDRLGELQENWKGSSSDLM  63
            + PA  IS  +Y GPGADS+ AA++QLR +  SA+ TA SL D L +L + W G SS  M
Sbjct  5    LTPAHQISYQMYAGPGADSMRAASQQLRELAFSADTTADSLNDTLFDLDDTWIGGSSAFM  64

Query  64   ADAAGRYLDWLTKHSRQILETAYVIDFLAYVYEETRHKVVPPATIANNREEVHRLIASNV  123
             DAA RYL WL+KHS+++ +TA  I  LA  YE+ R +VVPPA I +NREEV RLIAS++
Sbjct  65   TDAALRYLKWLSKHSKRLWQTANTIHHLANTYEDIRQRVVPPAAIEDNREEVRRLIASDI  124

Query  124  AGVNTPAIAGLDAQYQQYRAQNIAVMNDYQSTARFILAYLPRWQEPPQIYGGGGG  178
             G N PAIA LD QYQ Y   N+  MN Y   A+ +L+ LPRWQEPPQI+  G G
Sbjct  125  TGENAPAIAELDEQYQSYGDTNVQAMNLYAERAQTLLSQLPRWQEPPQIHQRGRG  179


>gi|306777764|ref|ZP_07416101.1| putative PPE family protein [Mycobacterium tuberculosis SUMu001]
 gi|308213899|gb|EFO73298.1| putative PPE family protein [Mycobacterium tuberculosis SUMu001]
Length=153

 Score =  181 bits (458),  Expect = 4e-44, Method: Compositional matrix adjust.
 Identities = 100/151 (67%), Positives = 113/151 (75%), Gaps = 0/151 (0%)

Query  26   AAEQLRLMYNSANMTAKSLTDRLGELQENWKGSSSDLMADAAGRYLDWLTKHSRQILETA  85
            A+ QLR +  S   TA+SL D L EL ENWKGSSSDL+ADA  RYL WL+KHS Q+   A
Sbjct  3    ASGQLRELAYSVETTAESLEDELDELDENWKGSSSDLLADAVERYLQWLSKHSSQLKHAA  62

Query  86   YVIDFLAYVYEETRHKVVPPATIANNREEVHRLIASNVAGVNTPAIAGLDAQYQQYRAQN  145
            +VI+ LA  Y +TR KVVPP  IA NREE  RLIASNVAGVNTPAIA LDAQY QYRA+N
Sbjct  63   WVINGLANAYNDTRRKVVPPEEIAANREERRRLIASNVAGVNTPAIADLDAQYDQYRARN  122

Query  146  IAVMNDYQSTARFILAYLPRWQEPPQIYGGG  176
            +AVMN Y S  R  L+ LPRW+EPPQIY GG
Sbjct  123  VAVMNAYVSWTRSALSDLPRWREPPQIYRGG  153


>gi|57117106|ref|YP_177972.1| PPE family protein [Mycobacterium tuberculosis H37Rv]
 gi|148663290|ref|YP_001284813.1| PPE family protein [Mycobacterium tuberculosis H37Ra]
 gi|167968685|ref|ZP_02550962.1| PPE family protein [Mycobacterium tuberculosis H37Ra]
 gi|306777766|ref|ZP_07416103.1| putative PPE family protein [Mycobacterium tuberculosis SUMu001]
 gi|2496464|sp|Q50702.1|PPE58_MYCTU RecName: Full=Uncharacterized PPE family protein PPE58
 gi|41352787|emb|CAE55597.1| PPE FAMILY PROTEIN [Mycobacterium tuberculosis H37Rv]
 gi|148507442|gb|ABQ75251.1| PPE family protein [Mycobacterium tuberculosis H37Ra]
 gi|308213900|gb|EFO73299.1| putative PPE family protein [Mycobacterium tuberculosis SUMu001]
Length=232

 Score =  176 bits (447),  Expect = 9e-43, Method: Compositional matrix adjust.
 Identities = 90/125 (72%), Positives = 100/125 (80%), Gaps = 0/125 (0%)

Query  1    MHPMIPAEYISNIIYEGPGADSLSAAAEQLRLMYNSANMTAKSLTDRLGELQENWKGSSS  60
            MH MIPAEYISN+IYEGP ADSL AA ++LR + +S   TA+SL   L EL ENWKGSSS
Sbjct  1    MHLMIPAEYISNVIYEGPRADSLYAADQRLRQLADSVRTTAESLNTTLDELHENWKGSSS  60

Query  61   DLMADAAGRYLDWLTKHSRQILETAYVIDFLAYVYEETRHKVVPPATIANNREEVHRLIA  120
            + MADAA RYLDWL+KHSRQIL TA VI+ L   YEET  +VVPPATIANNREEV RLIA
Sbjct  61   EWMADAALRYLDWLSKHSRQILRTARVIESLVMAYEETLLRVVPPATIANNREEVRRLIA  120

Query  121  SNVAG  125
            SNVAG
Sbjct  121  SNVAG  125


>gi|294995796|ref|ZP_06801487.1| PPE family protein [Mycobacterium tuberculosis 210]
 gi|339296252|gb|AEJ48363.1| PPE family protein [Mycobacterium tuberculosis CCDC5079]
Length=157

 Score =  167 bits (424),  Expect = 4e-40, Method: Compositional matrix adjust.
 Identities = 84/156 (54%), Positives = 106/156 (68%), Gaps = 0/156 (0%)

Query  23   LSAAAEQLRLMYNSANMTAKSLTDRLGELQENWKGSSSDLMADAAGRYLDWLTKHSRQIL  82
            + AA++QLR +  SA+ TA SL D L +L + W G SS  M DAA RYL WL+KHS+++ 
Sbjct  1    MRAASQQLRELAFSADTTADSLNDTLFDLDDTWIGGSSAFMTDAALRYLKWLSKHSKRLW  60

Query  83   ETAYVIDFLAYVYEETRHKVVPPATIANNREEVHRLIASNVAGVNTPAIAGLDAQYQQYR  142
            +TA  I  LA  YE+ R +VVPPA I +NREEV RLIAS++ G N PAIA LD QYQ Y 
Sbjct  61   QTANTIHHLANTYEDIRQRVVPPAAIEDNREEVRRLIASDITGENAPAIAELDEQYQSYG  120

Query  143  AQNIAVMNDYQSTARFILAYLPRWQEPPQIYGGGGG  178
              N+  MN Y   A+ +L+ LPRWQEPPQI+  G G
Sbjct  121  DTNVQAMNLYAERAQTLLSQLPRWQEPPQIHQRGRG  156


>gi|167968687|ref|ZP_02550964.1| PPE family protein [Mycobacterium tuberculosis H37Ra]
Length=125

 Score =  156 bits (394),  Expect = 1e-36, Method: Compositional matrix adjust.
 Identities = 78/115 (68%), Positives = 88/115 (77%), Gaps = 0/115 (0%)

Query  62   LMADAAGRYLDWLTKHSRQILETAYVIDFLAYVYEETRHKVVPPATIANNREEVHRLIAS  121
            L+ADA  RYL WL+KHS Q+   A+VI+ LA  Y +TR KVVPP  IA NREE  RLIAS
Sbjct  11   LLADAVERYLQWLSKHSSQLKHAAWVINGLANAYNDTRRKVVPPEEIAANREERRRLIAS  70

Query  122  NVAGVNTPAIAGLDAQYQQYRAQNIAVMNDYQSTARFILAYLPRWQEPPQIYGGG  176
            NVAGVNTPAIA LDAQY QYRA+N+AVMN Y S  R  L+ LPRW+EPPQIY GG
Sbjct  71   NVAGVNTPAIADLDAQYDQYRARNVAVMNAYVSWTRSALSDLPRWREPPQIYRGG  125


>gi|289759584|ref|ZP_06518962.1| PPE family protein [Mycobacterium tuberculosis T85]
 gi|289715148|gb|EFD79160.1| PPE family protein [Mycobacterium tuberculosis T85]
Length=90

 Score =  123 bits (308),  Expect = 1e-26, Method: Compositional matrix adjust.
 Identities = 62/90 (69%), Positives = 69/90 (77%), Gaps = 0/90 (0%)

Query  87   VIDFLAYVYEETRHKVVPPATIANNREEVHRLIASNVAGVNTPAIAGLDAQYQQYRAQNI  146
            +I+ LA  Y +TR KVVPP  IA NREE  RLIASNVAGVN PAIA LDAQY QYRA+N+
Sbjct  1    MINGLANAYNDTRRKVVPPEEIAANREERRRLIASNVAGVNAPAIADLDAQYDQYRARNV  60

Query  147  AVMNDYQSTARFILAYLPRWQEPPQIYGGG  176
            AVMN Y S  R  L+ LPRW+EPPQIY GG
Sbjct  61   AVMNAYVSWTRSALSDLPRWREPPQIYRGG  90


>gi|342861517|ref|ZP_08718164.1| PPE family protein [Mycobacterium colombiense CECT 3035]
 gi|342131006|gb|EGT84295.1| PPE family protein [Mycobacterium colombiense CECT 3035]
Length=389

 Score =  101 bits (252),  Expect = 4e-20, Method: Compositional matrix adjust.
 Identities = 60/169 (36%), Positives = 89/169 (53%), Gaps = 1/169 (0%)

Query  4    MIPAEYISNIIYEGPGADSLSAAAEQLRLMYNSANMTAKSLTDRLGELQENWKGSSSDLM  63
            ++P E IS +I+ GPGA S   AA   + +     ++A S T  L EL   W G SS  M
Sbjct  5    ILPPEVISALIHAGPGAWSWIEAAGMWQTLSAELELSANSYTAELSELATTWHGPSSMAM  64

Query  64   ADAAGRYLDWLTKHSRQILETAYVIDFLAYVYEETRHKVVPPATIANNREEVHRLIASNV  123
            A A   YLDWL   ++Q  + A  ++ +A  +E T   VV P+ +A NR  +  L+A+N 
Sbjct  65   AQAFEPYLDWLRVTAQQCQQVATSVEVMATAFESTHWTVVHPSLVAANRARLAMLVATNF  124

Query  124  AGVNTPAIAGLDAQYQQYRAQNIAVMNDYQSTARFILAYLPRWQEPPQI  172
             G+N PAIA  + +Y      + A M  Y +TA   +   P++  PPQ+
Sbjct  125  FGINFPAIAETETEYHAMWVTDSAAMYRYAATAAASV-RPPQFSSPPQV  172


>gi|41409517|ref|NP_962353.1| hypothetical protein MAP3419c [Mycobacterium avium subsp. paratuberculosis 
K-10]
 gi|118466968|ref|YP_883413.1| PPE family protein [Mycobacterium avium 104]
 gi|41398348|gb|AAS05969.1| hypothetical protein MAP_3419c [Mycobacterium avium subsp. paratuberculosis 
K-10]
 gi|118168255|gb|ABK69152.1| PPE family protein [Mycobacterium avium 104]
 gi|336459616|gb|EGO38551.1| PPE family protein [Mycobacterium avium subsp. paratuberculosis 
S397]
Length=378

 Score = 95.1 bits (235),  Expect = 4e-18, Method: Compositional matrix adjust.
 Identities = 59/169 (35%), Positives = 86/169 (51%), Gaps = 1/169 (0%)

Query  4    MIPAEYISNIIYEGPGADSLSAAAEQLRLMYNSANMTAKSLTDRLGELQENWKGSSSDLM  63
            ++P E  S +I+ GPGA S   AA   + +      +A S T  L  L   W+G S+  M
Sbjct  5    ILPPEVTSALIHAGPGAWSWIEAAGVWQQLSMELEQSASSYTAELAALSTTWQGPSALAM  64

Query  64   ADAAGRYLDWLTKHSRQILETAYVIDFLAYVYEETRHKVVPPATIANNREEVHRLIASNV  123
              A   Y+DWL   ++Q  E A  +      +E T   VV P+ +A NR  +  L+A+N 
Sbjct  65   TRALEPYVDWLRITAQQCQEIATSVQTATAAFELTHWTVVHPSLVAANRARLAMLLATNF  124

Query  124  AGVNTPAIAGLDAQYQQYRAQNIAVMNDYQSTARFILAYLPRWQEPPQI  172
             G+N PAIA  +A+Y      N A M  Y +T+   +  LPR+ EPPQ+
Sbjct  125  FGINYPAIAETEAEYHAMWVNNSAAMYRYAATSATAV-RLPRFTEPPQV  172


>gi|289747254|ref|ZP_06506632.1| PPE family protein [Mycobacterium tuberculosis 02_1987]
 gi|289687782|gb|EFD55270.1| PPE family protein [Mycobacterium tuberculosis 02_1987]
Length=86

 Score = 94.7 bits (234),  Expect = 4e-18, Method: Compositional matrix adjust.
 Identities = 54/76 (72%), Positives = 59/76 (78%), Gaps = 0/76 (0%)

Query  1   MHPMIPAEYISNIIYEGPGADSLSAAAEQLRLMYNSANMTAKSLTDRLGELQENWKGSSS  60
           MHPMIPAEYISNIIYEGPGADSL  A+ QLR +  S   TA+SL D L EL ENWKGSSS
Sbjct  1   MHPMIPAEYISNIIYEGPGADSLFFASGQLRELAYSVETTAESLEDELDELDENWKGSSS  60

Query  61  DLMADAAGRYLDWLTK  76
           DL+ADA  RYL WL+ 
Sbjct  61  DLLADAVERYLQWLSN  76


>gi|254776707|ref|ZP_05218223.1| PPE family protein [Mycobacterium avium subsp. avium ATCC 25291]
 gi|212596173|gb|ACJ35557.1| PPE34 [Mycobacterium avium subsp. avium]
Length=378

 Score = 94.7 bits (234),  Expect = 5e-18, Method: Compositional matrix adjust.
 Identities = 59/169 (35%), Positives = 86/169 (51%), Gaps = 1/169 (0%)

Query  4    MIPAEYISNIIYEGPGADSLSAAAEQLRLMYNSANMTAKSLTDRLGELQENWKGSSSDLM  63
            ++P E  S +I+ GPGA S   AA   + +      +A S T  L  L   W+G S+  M
Sbjct  5    ILPPEVTSALIHAGPGAWSWIEAAGVWQQLSMELEQSASSYTAELAALSTTWQGPSALAM  64

Query  64   ADAAGRYLDWLTKHSRQILETAYVIDFLAYVYEETRHKVVPPATIANNREEVHRLIASNV  123
              A   Y+DWL   ++Q  E A  +      +E T   VV P+ +A NR  +  L+A+N 
Sbjct  65   TRALEPYVDWLRITAQQCQEIATSVQTATAAFELTHWTVVHPSLVAANRARLAMLLATNF  124

Query  124  AGVNTPAIAGLDAQYQQYRAQNIAVMNDYQSTARFILAYLPRWQEPPQI  172
             G+N PAIA  +A+Y      N A M  Y +T+   +  LPR+ EPPQ+
Sbjct  125  FGINYPAIAETEAEYHAMWVNNSAAMYRYAATSASAV-RLPRFTEPPQV  172


>gi|254820680|ref|ZP_05225681.1| PPE family protein [Mycobacterium intracellulare ATCC 13950]
 gi|212596684|gb|ACJ35598.1| PPE34 [Mycobacterium intracellulare ATCC 13950]
Length=382

 Score = 94.0 bits (232),  Expect = 8e-18, Method: Compositional matrix adjust.
 Identities = 63/169 (38%), Positives = 89/169 (53%), Gaps = 1/169 (0%)

Query  4    MIPAEYISNIIYEGPGADSLSAAAEQLRLMYNSANMTAKSLTDRLGELQENWKGSSSDLM  63
            ++P E IS +I+ GPGA SL  AA   + +      +A S T  L  L   W G SS  M
Sbjct  5    ILPPEIISALIHSGPGAWSLIEAAGFWQELSAELEQSASSYTAELSWLSTTWHGPSSMAM  64

Query  64   ADAAGRYLDWLTKHSRQILETAYVIDFLAYVYEETRHKVVPPATIANNREEVHRLIASNV  123
            A A   YL WL   ++Q  +TA  +  +A  +E T   VV P+ +A NR  +  L+A+N 
Sbjct  65   AQALEPYLAWLRLTAQQCQQTAASVQVVAAAFEWTHWTVVHPSLVAANRARLAMLLATNF  124

Query  124  AGVNTPAIAGLDAQYQQYRAQNIAVMNDYQSTARFILAYLPRWQEPPQI  172
             GVN PAIA  +A+Y      N A M  Y +T+   +  LP++  PPQ+
Sbjct  125  FGVNYPAIAETEAEYHTMWVNNSAAMYRYAATSAGAV-KLPQFSPPPQV  172


>gi|342861033|ref|ZP_08717682.1| PPE family protein [Mycobacterium colombiense CECT 3035]
 gi|342131477|gb|EGT84747.1| PPE family protein [Mycobacterium colombiense CECT 3035]
Length=376

 Score = 93.2 bits (230),  Expect = 1e-17, Method: Compositional matrix adjust.
 Identities = 57/153 (38%), Positives = 80/153 (53%), Gaps = 0/153 (0%)

Query  14   IYEGPGADSLSAAAEQLRLMYNSANMTAKSLTDRLGELQENWKGSSSDLMADAAGRYLDW  73
            +Y GPG  SL AAA     +      TA+S    L  L   W+G +++ MA +A RY+ W
Sbjct  1    MYTGPGLASLLAAAGSWDALSAELASTAESYESVLVGLGLQWRGPAAESMAYSAARYMGW  60

Query  74   LTKHSRQILETAYVIDFLAYVYEETRHKVVPPATIANNREEVHRLIASNVAGVNTPAIAG  133
            L   + Q  +TA      A  YE+     VPP  IA NR  +  L+A+N+ G NT AIA 
Sbjct  61   LEATAEQTKQTAMQARTAAAAYEQAYSMTVPPPVIAANRTLLASLVATNIVGQNTAAIAD  120

Query  134  LDAQYQQYRAQNIAVMNDYQSTARFILAYLPRW  166
             +AQY  + AQ+ A M  Y +++    A LPR+
Sbjct  121  TEAQYSDFWAQDAAAMAGYSASSTVATAQLPRF  153


>gi|333989927|ref|YP_004522541.1| PPE family protein PPE51_2 [Mycobacterium sp. JDM601]
 gi|333485895|gb|AEF35287.1| PPE family protein PPE51_2 [Mycobacterium sp. JDM601]
Length=373

 Score = 91.7 bits (226),  Expect = 4e-17, Method: Compositional matrix adjust.
 Identities = 62/169 (37%), Positives = 88/169 (53%), Gaps = 2/169 (1%)

Query  4    MIPAEYISNIIYEGPGADSLSAAAEQLRLMYNSANMTAKSLTDRLGELQ-ENWKGSSSDL  62
            ++P E IS  +Y GPG+  L A+A     +    N  A   +  L  LQ E W G+SS  
Sbjct  6    ILPPEVISTQMYTGPGSGPLLASAAAWDALSGQLNAFALGYSTTLTGLQDEGWTGASSQA  65

Query  63   MADAAGRYLDWLTKHSRQILETAYVIDFLAYVYEETRHKVVPPATIANNREEVHRLIASN  122
            M  AA  Y+ W+++ + Q    A      A  YE  R   VPPA +  NR ++  L+A+N
Sbjct  66   MLAAAAPYIAWVSQTATQAEHAATQSRAAAAAYESARAATVPPAVVTTNRTQLANLVATN  125

Query  123  VAGVNTPAIAGLDAQYQQYRAQNIAVMNDYQSTARFILAYLPRWQEPPQ  171
            + G NT  I+ L+A Y Q  AQ+ A M+ Y +TA +    L  +QEPPQ
Sbjct  126  IFGQNTALISALEAAYAQMWAQDAAAMHGYATTA-YTATQLAPFQEPPQ  173


>gi|296167733|ref|ZP_06849950.1| PPE family protein [Mycobacterium parascrofulaceum ATCC BAA-614]
 gi|295897076|gb|EFG76691.1| PPE family protein [Mycobacterium parascrofulaceum ATCC BAA-614]
Length=406

 Score = 91.7 bits (226),  Expect = 4e-17, Method: Compositional matrix adjust.
 Identities = 56/148 (38%), Positives = 78/148 (53%), Gaps = 1/148 (0%)

Query  6    PAEYISNIIYEGPGADSLSAAAEQLRLMYNSANMTAKSLTDRLGELQ-ENWKGSSSDLMA  64
            P EY S  +Y GPG ++L+AAA     +    N TA      +  L  E W G +S  MA
Sbjct  8    PPEYNSARMYTGPGPEALTAAASAWNGLAAELNSTALGYDKVITALSGEEWLGPASASMA  67

Query  65   DAAGRYLDWLTKHSRQILETAYVIDFLAYVYEETRHKVVPPATIANNREEVHRLIASNVA  124
             A   Y+ W+   + Q  +TA  +   A  YE      VPP  +A NR +  +L+A+NV 
Sbjct  68   QAVAPYVAWMRTTAAQAEQTANQMHAAATAYETALAATVPPPLVAANRAQTAQLLATNVL  127

Query  125  GVNTPAIAGLDAQYQQYRAQNIAVMNDY  152
            G+NTPAIA L+AQY +  AQ+ + M  Y
Sbjct  128  GLNTPAIAQLEAQYGEMWAQDASTMYSY  155


>gi|240171260|ref|ZP_04749919.1| PPE family protein [Mycobacterium kansasii ATCC 12478]
Length=472

 Score = 90.5 bits (223),  Expect = 8e-17, Method: Compositional matrix adjust.
 Identities = 62/159 (39%), Positives = 83/159 (53%), Gaps = 2/159 (1%)

Query  4    MIPAEYISNIIYEGPGADSLSAAAEQLRLMYNSANMTAKSLTDRLGELQENWKGSSSDLM  63
            ++P E  S  +Y GPG+  +  AAE    +      TA S +  +  L   W+G SS  M
Sbjct  5    LLPPEINSGRMYAGPGSGPMLTAAEAWDALAAQLYSTAASYSSVITALTATWQGPSSVSM  64

Query  64   ADAAGRYLDWLTKHSRQILETAYVIDFLAYVYEETRHKVVPPATIANNREEVHRLIASNV  123
            A AA  Y+ W +  + Q  +TA      A  YE T   +VPP  IA NR E+  L+A+N+
Sbjct  65   ATAAAPYMAWTSATAAQSEQTAAQARAAAVAYETTFAAMVPPPVIAANRSELASLVATNI  124

Query  124  AGVNTPAIAGLDAQYQQYRAQNIAVMNDY--QSTARFIL  160
             G NTPAIA  +AQY Q  AQ+   MN+Y  QS A   L
Sbjct  125  FGQNTPAIAANEAQYAQMWAQDATAMNNYAGQSAAATTL  163


>gi|240169037|ref|ZP_04747696.1| PPE family protein [Mycobacterium kansasii ATCC 12478]
Length=391

 Score = 88.2 bits (217),  Expect = 4e-16, Method: Compositional matrix adjust.
 Identities = 67/177 (38%), Positives = 90/177 (51%), Gaps = 7/177 (3%)

Query  5    IPAEYISNIIYEGPGADSLSAAAEQLRL----MYNSANMTAKSLTDRLGELQENWKGSSS  60
            +P E  S  +Y GPG+ SL AAA+        +YN+A+     +    G L   W+G+S+
Sbjct  6    LPPEINSARMYTGPGSGSLLAAAQVWDGVAIDLYNAASAVQSVI---WGLLVGPWRGTSA  62

Query  61   DLMADAAGRYLDWLTKHSRQILETAYVIDFLAYVYEETRHKVVPPATIANNREEVHRLIA  120
             LM  AA  Y+ WL   + Q   TA  +   A  YE      VPPA IA NR ++  LIA
Sbjct  63   GLMVAAASPYVTWLGTTAAQAELTADQVRTAATAYEAAFATTVPPAVIAGNRIQLLTLIA  122

Query  121  SNVAGVNTPAIAGLDAQYQQYRAQNIAVMNDYQSTARFILAYLPRWQEPPQIYGGGG  177
            SN+ G NTPAIA  +A Y +  AQ+ A M  Y  +A      L  + E P+I   GG
Sbjct  123  SNLFGQNTPAIAVTEADYGEMWAQDAAAMYGYAGSAAVAAETLTPFDESPEITNAGG  179


>gi|183980225|ref|YP_001848516.1| PPE family protein, PPE51_2 [Mycobacterium marinum M]
 gi|183173551|gb|ACC38661.1| PPE family protein, PPE51_2 [Mycobacterium marinum M]
Length=381

 Score = 87.8 bits (216),  Expect = 6e-16, Method: Compositional matrix adjust.
 Identities = 57/162 (36%), Positives = 80/162 (50%), Gaps = 1/162 (0%)

Query  4    MIPAEYISNIIYEGPGADSLSAAAEQLRLMYNSANMTAKSLTDRLGELQEN-WKGSSSDL  62
            M+P E  S ++Y GPGA SL AAA     +      TA++    L  L    W G +S+ 
Sbjct  5    MLPPEVNSGLMYTGPGAGSLLAAANSWDELAIELGTTAQTYESVLSGLTSMYWAGPASES  64

Query  63   MADAAGRYLDWLTKHSRQILETAYVIDFLAYVYEETRHKVVPPATIANNREEVHRLIASN  122
            MA  A  Y+ WL   + Q  +TA      A  +E+     VPP  I  NR ++  L+A+N
Sbjct  65   MAAKAAPYVWWLHSTAEQTQQTATQCRAAAMAFEQAYAMTVPPPVILANRMQLMSLVATN  124

Query  123  VAGVNTPAIAGLDAQYQQYRAQNIAVMNDYQSTARFILAYLP  164
              G NT AIA L+AQY +   Q+ A M  Y ++A      +P
Sbjct  125  FFGQNTAAIAALEAQYAEMWEQDAAAMYGYATSAAMAAQLVP  166


>gi|340626377|ref|YP_004744829.1| PPE family protein [Mycobacterium canettii CIPT 140010059]
 gi|340004567|emb|CCC43711.1| PPE family protein [Mycobacterium canettii CIPT 140010059]
Length=396

 Score = 85.5 bits (210),  Expect = 3e-15, Method: Compositional matrix adjust.
 Identities = 64/174 (37%), Positives = 90/174 (52%), Gaps = 1/174 (0%)

Query  5    IPAEYISNIIYEGPGADSLSAAAEQLRLMYNSANMTAKSLTDRL-GELQENWKGSSSDLM  63
            +P E  S  +Y GPG+ SL AAA+    + +     A +    + G    +W GSS+ LM
Sbjct  7    LPPEINSARMYAGPGSASLVAAAQMWDSVASDLFSAASAFQSVVWGLTTGSWIGSSAGLM  66

Query  64   ADAAGRYLDWLTKHSRQILETAYVIDFLAYVYEETRHKVVPPATIANNREEVHRLIASNV  123
            A AA  Y+ W++  + Q   TA  +   A  YE      VPP  IA NR E+  LIA+N+
Sbjct  67   AAAASPYVAWMSVTAGQAQLTAAQVRVAAAAYETAHGLTVPPPVIAENRAELMILIATNL  126

Query  124  AGVNTPAIAGLDAQYQQYRAQNIAVMNDYQSTARFILAYLPRWQEPPQIYGGGG  177
             G NTPAIA  +A+Y +  AQ+ A M  Y +TA      L  +++ P I   GG
Sbjct  127  LGQNTPAIAVNEAEYGEMWAQDAAAMFGYAATAATATEALLPFEDAPLITNPGG  180


>gi|289446957|ref|ZP_06436701.1| PPE family protein [Mycobacterium tuberculosis CPHL_A]
 gi|289419915|gb|EFD17116.1| PPE family protein [Mycobacterium tuberculosis CPHL_A]
Length=396

 Score = 84.7 bits (208),  Expect = 5e-15, Method: Compositional matrix adjust.
 Identities = 64/174 (37%), Positives = 90/174 (52%), Gaps = 1/174 (0%)

Query  5    IPAEYISNIIYEGPGADSLSAAAEQLRLMYNSANMTAKSLTDRL-GELQENWKGSSSDLM  63
            +P E  S  +Y GPG+ SL AAA+    + +     A +    + G    +W GSS+ LM
Sbjct  7    LPPEINSARMYAGPGSASLVAAAKMWDSVASDLFSAASAFQSVVWGLTTGSWIGSSAGLM  66

Query  64   ADAAGRYLDWLTKHSRQILETAYVIDFLAYVYEETRHKVVPPATIANNREEVHRLIASNV  123
            A AA  Y+ W++  + Q   TA  +   A  YE      VPP  IA NR E+  LIA+N+
Sbjct  67   AAAASPYVAWMSVTAGQAELTAAQVRVAAAAYETAYRLTVPPPVIAENRAELMILIATNL  126

Query  124  AGVNTPAIAGLDAQYQQYRAQNIAVMNDYQSTARFILAYLPRWQEPPQIYGGGG  177
             G NTPAIA  +A+Y +  AQ+ A M  Y +TA      L  +++ P I   GG
Sbjct  127  LGQNTPAIAVNEAEYGEMWAQDAAAMFGYAATAATATEALLPFEDAPLITNPGG  180


>gi|339294339|gb|AEJ46450.1| PPE family protein [Mycobacterium tuberculosis CCDC5079]
Length=396

 Score = 84.7 bits (208),  Expect = 5e-15, Method: Compositional matrix adjust.
 Identities = 64/174 (37%), Positives = 90/174 (52%), Gaps = 1/174 (0%)

Query  5    IPAEYISNIIYEGPGADSLSAAAEQLRLMYNSANMTAKSLTDRL-GELQENWKGSSSDLM  63
            +P E  S  +Y GPG+ SL AAA+    + +     A +    + G    +W GSS+ LM
Sbjct  7    LPPEINSARMYAGPGSASLVAAAKMWDSVASDLFSAASAFQSVVWGLTTGSWIGSSAGLM  66

Query  64   ADAAGRYLDWLTKHSRQILETAYVIDFLAYVYEETRHKVVPPATIANNREEVHRLIASNV  123
            A AA  Y+ W++  + Q   TA  +   A  YE      VPP  IA NR E+  LIA+N+
Sbjct  67   AAAASPYVAWMSVTAGQAQLTAAQVRVAAAAYETAYGLTVPPPVIAENRAELMILIATNL  126

Query  124  AGVNTPAIAGLDAQYQQYRAQNIAVMNDYQSTARFILAYLPRWQEPPQIYGGGG  177
             G NTPAIA  +A+Y +  AQ+ A M  Y +TA      L  +++ P I   GG
Sbjct  127  LGQNTPAIAVNEAEYGEMWAQDAAAMFGYAATAATATEALLPFEDAPLITNPGG  180


>gi|289755661|ref|ZP_06515039.1| PPE family protein [Mycobacterium tuberculosis EAS054]
 gi|289696248|gb|EFD63677.1| PPE family protein [Mycobacterium tuberculosis EAS054]
Length=405

 Score = 84.0 bits (206),  Expect = 8e-15, Method: Compositional matrix adjust.
 Identities = 62/155 (40%), Positives = 81/155 (53%), Gaps = 4/155 (2%)

Query  4    MIPAEYISNIIYEGPGADSLSAAA--EQLRLMYNSANMTAKSLTDRLGELQENWKGSSSD  61
            M+P E  S  +Y GPGA SL AAA  +Q+     SA  T +S+   L   Q  W G SS 
Sbjct  7    MLPPEVNSTRMYSGPGAGSLWAAAAWDQVSAELQSAAETYRSVIASLTGWQ--WLGPSSV  64

Query  62   LMADAAGRYLDWLTKHSRQILETAYVIDFLAYVYEETRHKVVPPATIANNREEVHRLIAS  121
             M  A   Y++WLT  + Q  +TA  I   A  +E+     VPP  I  NR +V  LIA+
Sbjct  65   RMGAAVTPYVEWLTTTAAQARQTATQITAAATGFEQAFAMTVPPPAIMANRAQVLSLIAT  124

Query  122  NVAGVNTPAIAGLDAQYQQYRAQNIAVMNDYQSTA  156
            N  G NT AIA L+ QY +   Q+   M DY +T+
Sbjct  125  NFFGQNTAAIAALETQYAEMWEQDATAMYDYAATS  159


>gi|298527010|ref|ZP_07014419.1| ppe family protein [Mycobacterium tuberculosis 94_M4241A]
 gi|298496804|gb|EFI32098.1| ppe family protein [Mycobacterium tuberculosis 94_M4241A]
Length=405

 Score = 84.0 bits (206),  Expect = 8e-15, Method: Compositional matrix adjust.
 Identities = 62/155 (40%), Positives = 81/155 (53%), Gaps = 4/155 (2%)

Query  4    MIPAEYISNIIYEGPGADSLSAAA--EQLRLMYNSANMTAKSLTDRLGELQENWKGSSSD  61
            M+P E  S  +Y GPGA SL AAA  +Q+     SA  T +S+   L   Q  W G SS 
Sbjct  7    MLPPEVNSTRMYSGPGAGSLWAAAAWDQVSAELQSAAETYRSVIASLTGWQ--WLGPSSV  64

Query  62   LMADAAGRYLDWLTKHSRQILETAYVIDFLAYVYEETRHKVVPPATIANNREEVHRLIAS  121
             M  A   Y++WLT  + Q  +TA  I   A  +E+     VPP  I  NR +V  LIA+
Sbjct  65   RMGAAVTPYVEWLTTTAAQARQTATQITAAATGFEQAFAMTVPPPAIMANRAQVLSLIAT  124

Query  122  NVAGVNTPAIAGLDAQYQQYRAQNIAVMNDYQSTA  156
            N  G NT AIA L+ QY +   Q+   M DY +T+
Sbjct  125  NFFGQNTAAIAALETQYAEMWEQDATAMYDYAATS  159


>gi|240169296|ref|ZP_04747955.1| PPE family protein [Mycobacterium kansasii ATCC 12478]
Length=409

 Score = 83.6 bits (205),  Expect = 1e-14, Method: Compositional matrix adjust.
 Identities = 62/152 (41%), Positives = 81/152 (54%), Gaps = 5/152 (3%)

Query  4    MIPAEYISNIIYEGPGADSLSAAAEQLRLM---YNSANMTAKSLTDRLGELQENWKGSSS  60
            ++P E  S  +Y GPG+ SL  AA   +L+    +SA    +S+   L  +Q  W GSSS
Sbjct  6    LLPPEVNSARMYTGPGSASLRTAAASWQLLAVELHSAASMYRSVVMDLTSMQ--WTGSSS  63

Query  61   DLMADAAGRYLDWLTKHSRQILETAYVIDFLAYVYEETRHKVVPPATIANNREEVHRLIA  120
              MA A   Y+DWLT  + Q   TA      A  +E+     VPP  IA NR E+  LIA
Sbjct  64   MSMAAAVIPYVDWLTVTAEQAGHTAAQATAAATAFEQAFAMTVPPPLIAANRAELLALIA  123

Query  121  SNVAGVNTPAIAGLDAQYQQYRAQNIAVMNDY  152
            +N  G NT AIA  +AQY Q  AQ+   M+DY
Sbjct  124  TNFFGQNTAAIATTEAQYMQMWAQDATAMDDY  155


>gi|289574028|ref|ZP_06454255.1| PPE family protein [Mycobacterium tuberculosis K85]
 gi|289753443|ref|ZP_06512821.1| PPE family protein [Mycobacterium tuberculosis EAS054]
 gi|339631430|ref|YP_004723072.1| PPE family protein [Mycobacterium africanum GM041182]
 gi|289538459|gb|EFD43037.1| PPE family protein [Mycobacterium tuberculosis K85]
 gi|289694030|gb|EFD61459.1| PPE family protein [Mycobacterium tuberculosis EAS054]
 gi|339330786|emb|CCC26457.1| PPE family protein [Mycobacterium africanum GM041182]
Length=396

 Score = 83.2 bits (204),  Expect = 2e-14, Method: Compositional matrix adjust.
 Identities = 63/174 (37%), Positives = 89/174 (52%), Gaps = 1/174 (0%)

Query  5    IPAEYISNIIYEGPGADSLSAAAEQLRLMYNSANMTAKSLTDRL-GELQENWKGSSSDLM  63
            +P E  S  +Y GPG+ SL AAA+    + +     A +    + G    +W GSS+ LM
Sbjct  7    LPPEINSARMYAGPGSASLVAAAQMWDSVASDLFSAASAFQSVVWGLTTGSWIGSSAGLM  66

Query  64   ADAAGRYLDWLTKHSRQILETAYVIDFLAYVYEETRHKVVPPATIANNREEVHRLIASNV  123
              AA  Y+ W++  + Q   TA  +   A  YE      VPP  IA NR E+  LIA+N+
Sbjct  67   VAAASPYVAWMSVTAGQAELTAAQVRVAAAAYETAYGLTVPPPVIAENRAELMILIATNL  126

Query  124  AGVNTPAIAGLDAQYQQYRAQNIAVMNDYQSTARFILAYLPRWQEPPQIYGGGG  177
             G NTPAIA  +A+Y +  AQ+ A M  Y +TA      L  +++ P I   GG
Sbjct  127  LGQNTPAIAVNEAEYGEMWAQDAAAMFGYAATAATATEALLPFEDAPLITNPGG  180


>gi|306784092|ref|ZP_07422414.1| PPE family protein [Mycobacterium tuberculosis SUMu003]
 gi|306788459|ref|ZP_07426781.1| PPE family protein [Mycobacterium tuberculosis SUMu004]
 gi|306792785|ref|ZP_07431087.1| PPE family protein [Mycobacterium tuberculosis SUMu005]
 gi|306797185|ref|ZP_07435487.1| PPE family protein [Mycobacterium tuberculosis SUMu006]
 gi|308331160|gb|EFP20011.1| PPE family protein [Mycobacterium tuberculosis SUMu003]
 gi|308334942|gb|EFP23793.1| PPE family protein [Mycobacterium tuberculosis SUMu004]
 gi|308338747|gb|EFP27598.1| PPE family protein [Mycobacterium tuberculosis SUMu005]
 gi|308342446|gb|EFP31297.1| PPE family protein [Mycobacterium tuberculosis SUMu006]
Length=396

 Score = 82.8 bits (203),  Expect = 2e-14, Method: Compositional matrix adjust.
 Identities = 63/174 (37%), Positives = 89/174 (52%), Gaps = 1/174 (0%)

Query  5    IPAEYISNIIYEGPGADSLSAAAEQLRLMYNSANMTAKSLTDRL-GELQENWKGSSSDLM  63
            +P E  S  +Y GPG+ SL AAA+    + +     A +    + G    +W GSS+ LM
Sbjct  7    LPPEINSARMYAGPGSASLVAAAKMWDSVASDLFSAASAFQSVVWGLTTGSWIGSSAGLM  66

Query  64   ADAAGRYLDWLTKHSRQILETAYVIDFLAYVYEETRHKVVPPATIANNREEVHRLIASNV  123
              AA  Y+ W++  + Q   TA  +   A  YE      VPP  IA NR E+  LIA+N+
Sbjct  67   VAAASPYVAWMSVTAGQAELTAAQVRVAAAAYETAYGLTVPPPVIAENRAELMILIATNL  126

Query  124  AGVNTPAIAGLDAQYQQYRAQNIAVMNDYQSTARFILAYLPRWQEPPQIYGGGG  177
             G NTPAIA  +A+Y +  AQ+ A M  Y +TA      L  +++ P I   GG
Sbjct  127  LGQNTPAIAVNEAEYGEMWAQDAAAMFGYAATAATATEALLPFEDAPLITNPGG  180


>gi|289757466|ref|ZP_06516844.1| PPE family protein [Mycobacterium tuberculosis T85]
 gi|289713030|gb|EFD77042.1| PPE family protein [Mycobacterium tuberculosis T85]
Length=225

 Score = 82.8 bits (203),  Expect = 2e-14, Method: Compositional matrix adjust.
 Identities = 63/174 (37%), Positives = 89/174 (52%), Gaps = 1/174 (0%)

Query  5    IPAEYISNIIYEGPGADSLSAAAEQLRLMYNSANMTAKSLTDRL-GELQENWKGSSSDLM  63
            +P E  S  +Y GPG+ SL AAA+    + +     A +    + G    +W GSS+ LM
Sbjct  7    LPPEINSARMYAGPGSASLVAAAKMWDSVASDLFSAASAFQSVVWGLTTGSWIGSSAGLM  66

Query  64   ADAAGRYLDWLTKHSRQILETAYVIDFLAYVYEETRHKVVPPATIANNREEVHRLIASNV  123
              AA  Y+ W++  + Q   TA  +   A  YE      VPP  IA NR E+  LIA+N+
Sbjct  67   VAAASPYVAWMSVTAGQAELTAAQVRVAAAAYETAYGLTVPPPVIAENRAELMILIATNL  126

Query  124  AGVNTPAIAGLDAQYQQYRAQNIAVMNDYQSTARFILAYLPRWQEPPQIYGGGG  177
             G NTPAIA  +A+Y +  AQ+ A M  Y +TA      L  +++ P I   GG
Sbjct  127  LGQNTPAIAVNEAEYGEMWAQDAAAMFGYAATAATATEALLPFEDAPLITNPGG  180


>gi|57116852|ref|YP_177801.1| PPE family protein [Mycobacterium tuberculosis H37Rv]
 gi|148661151|ref|YP_001282674.1| PPE family protein [Mycobacterium tuberculosis H37Ra]
 gi|148822583|ref|YP_001287337.1| PPE family protein [Mycobacterium tuberculosis F11]
 21 more sequence titles
 
gi|167969112|ref|ZP_02551389.1| PPE family protein [Mycobacterium tuberculosis H37Ra]
 gi|254550376|ref|ZP_05140823.1| PPE family protein [Mycobacterium tuberculosis '98-R604 INH-RIF-EM']
 gi|289442805|ref|ZP_06432549.1| PPE family protein [Mycobacterium tuberculosis T46]
 gi|289745113|ref|ZP_06504491.1| PPE family protein [Mycobacterium tuberculosis 02_1987]
 gi|289749917|ref|ZP_06509295.1| PPE family protein [Mycobacterium tuberculosis T92]
 gi|289761522|ref|ZP_06520900.1| PPE family protein [Mycobacterium tuberculosis GM 1503]
 gi|294994920|ref|ZP_06800611.1| PPE family protein [Mycobacterium tuberculosis 210]
 gi|297633916|ref|ZP_06951696.1| PPE family protein [Mycobacterium tuberculosis KZN 4207]
 gi|298524868|ref|ZP_07012277.1| PPE family protein [Mycobacterium tuberculosis 94_M4241A]
 gi|1723066|sp|Q11031.1|PPE19_MYCTU RecName: Full=Uncharacterized PPE family protein PPE19
 gi|38490258|emb|CAE55379.1| PPE FAMILY PROTEIN [Mycobacterium tuberculosis H37Rv]
 gi|148505303|gb|ABQ73112.1| PPE family protein [Mycobacterium tuberculosis H37Ra]
 gi|148721110|gb|ABR05735.1| PPE family protein [Mycobacterium tuberculosis F11]
 gi|289415724|gb|EFD12964.1| PPE family protein [Mycobacterium tuberculosis T46]
 gi|289685641|gb|EFD53129.1| PPE family protein [Mycobacterium tuberculosis 02_1987]
 gi|289690504|gb|EFD57933.1| PPE family protein [Mycobacterium tuberculosis T92]
 gi|289709028|gb|EFD73044.1| PPE family protein [Mycobacterium tuberculosis GM 1503]
 gi|298494662|gb|EFI29956.1| PPE family protein [Mycobacterium tuberculosis 94_M4241A]
 gi|326902984|gb|EGE49917.1| PPE family protein [Mycobacterium tuberculosis W-148]
 gi|339297978|gb|AEJ50088.1| PPE family protein [Mycobacterium tuberculosis CCDC5180]
 gi|344219193|gb|AEM99823.1| PPE family protein [Mycobacterium tuberculosis CTRI-2]
Length=396

 Score = 82.8 bits (203),  Expect = 2e-14, Method: Compositional matrix adjust.
 Identities = 63/174 (37%), Positives = 89/174 (52%), Gaps = 1/174 (0%)

Query  5    IPAEYISNIIYEGPGADSLSAAAEQLRLMYNSANMTAKSLTDRL-GELQENWKGSSSDLM  63
            +P E  S  +Y GPG+ SL AAA+    + +     A +    + G    +W GSS+ LM
Sbjct  7    LPPEINSARMYAGPGSASLVAAAKMWDSVASDLFSAASAFQSVVWGLTTGSWIGSSAGLM  66

Query  64   ADAAGRYLDWLTKHSRQILETAYVIDFLAYVYEETRHKVVPPATIANNREEVHRLIASNV  123
              AA  Y+ W++  + Q   TA  +   A  YE      VPP  IA NR E+  LIA+N+
Sbjct  67   VAAASPYVAWMSVTAGQAELTAAQVRVAAAAYETAYGLTVPPPVIAENRAELMILIATNL  126

Query  124  AGVNTPAIAGLDAQYQQYRAQNIAVMNDYQSTARFILAYLPRWQEPPQIYGGGG  177
             G NTPAIA  +A+Y +  AQ+ A M  Y +TA      L  +++ P I   GG
Sbjct  127  LGQNTPAIAVNEAEYGEMWAQDAAAMFGYAATAATATEALLPFEDAPLITNPGG  180


>gi|308231818|ref|ZP_07413879.2| PPE family protein [Mycobacterium tuberculosis SUMu001]
 gi|308215968|gb|EFO75367.1| PPE family protein [Mycobacterium tuberculosis SUMu001]
Length=395

 Score = 82.8 bits (203),  Expect = 2e-14, Method: Compositional matrix adjust.
 Identities = 63/174 (37%), Positives = 89/174 (52%), Gaps = 1/174 (0%)

Query  5    IPAEYISNIIYEGPGADSLSAAAEQLRLMYNSANMTAKSLTDRL-GELQENWKGSSSDLM  63
            +P E  S  +Y GPG+ SL AAA+    + +     A +    + G    +W GSS+ LM
Sbjct  6    LPPEINSARMYAGPGSASLVAAAKMWDSVASDLFSAASAFQSVVWGLTTGSWIGSSAGLM  65

Query  64   ADAAGRYLDWLTKHSRQILETAYVIDFLAYVYEETRHKVVPPATIANNREEVHRLIASNV  123
              AA  Y+ W++  + Q   TA  +   A  YE      VPP  IA NR E+  LIA+N+
Sbjct  66   VAAASPYVAWMSVTAGQAELTAAQVRVAAAAYETAYGLTVPPPVIAENRAELMILIATNL  125

Query  124  AGVNTPAIAGLDAQYQQYRAQNIAVMNDYQSTARFILAYLPRWQEPPQIYGGGG  177
             G NTPAIA  +A+Y +  AQ+ A M  Y +TA      L  +++ P I   GG
Sbjct  126  LGQNTPAIAVNEAEYGEMWAQDAAAMFGYAATAATATEALLPFEDAPLITNPGG  179


>gi|253799589|ref|YP_003032590.1| PPE family protein [Mycobacterium tuberculosis KZN 1435]
 gi|297730905|ref|ZP_06960023.1| PPE family protein [Mycobacterium tuberculosis KZN R506]
 gi|313658238|ref|ZP_07815118.1| PPE family protein [Mycobacterium tuberculosis KZN V2475]
 gi|253321092|gb|ACT25695.1| PPE family protein [Mycobacterium tuberculosis KZN 1435]
Length=396

 Score = 82.8 bits (203),  Expect = 2e-14, Method: Compositional matrix adjust.
 Identities = 63/174 (37%), Positives = 89/174 (52%), Gaps = 1/174 (0%)

Query  5    IPAEYISNIIYEGPGADSLSAAAEQLRLMYNSANMTAKSLTDRL-GELQENWKGSSSDLM  63
            +P E  S  +Y GPG+ SL AAA+    + +     A +    + G    +W GSS+ LM
Sbjct  7    LPPEINSARMYAGPGSASLVAAAKMWDSVASDLFSAASAFQSVVWGLTTGSWIGSSAGLM  66

Query  64   ADAAGRYLDWLTKHSRQILETAYVIDFLAYVYEETRHKVVPPATIANNREEVHRLIASNV  123
              AA  Y+ W++  + Q   TA  +   A  YE      VPP  IA NR E+  LIA+N+
Sbjct  67   VAAASPYVAWMSVTAGQAELTAAQVRVAAAAYETAYGLTVPPPVIAENRAELMILIATNL  126

Query  124  AGVNTPAIAGLDAQYQQYRAQNIAVMNDYQSTARFILAYLPRWQEPPQIYGGGG  177
             G NTPAIA  +A+Y +  AQ+ A M  Y +TA      L  +++ P I   GG
Sbjct  127  LGQNTPAIAVNEAEYGEMWAQDAAAMFGYAATAATATEALLPFEDAPLITNPGG  180


>gi|308376701|ref|ZP_07439733.2| PPE family protein [Mycobacterium tuberculosis SUMu008]
 gi|308350282|gb|EFP39133.1| PPE family protein [Mycobacterium tuberculosis SUMu008]
Length=405

 Score = 82.4 bits (202),  Expect = 2e-14, Method: Compositional matrix adjust.
 Identities = 63/174 (37%), Positives = 89/174 (52%), Gaps = 1/174 (0%)

Query  5    IPAEYISNIIYEGPGADSLSAAAEQLRLMYNSANMTAKSLTDRL-GELQENWKGSSSDLM  63
            +P E  S  +Y GPG+ SL AAA+    + +     A +    + G    +W GSS+ LM
Sbjct  16   LPPEINSARMYAGPGSASLVAAAKMWDSVASDLFSAASAFQSVVWGLTTGSWIGSSAGLM  75

Query  64   ADAAGRYLDWLTKHSRQILETAYVIDFLAYVYEETRHKVVPPATIANNREEVHRLIASNV  123
              AA  Y+ W++  + Q   TA  +   A  YE      VPP  IA NR E+  LIA+N+
Sbjct  76   VAAASPYVAWMSVTAGQAELTAAQVRVAAAAYETAYGLTVPPPVIAENRAELMILIATNL  135

Query  124  AGVNTPAIAGLDAQYQQYRAQNIAVMNDYQSTARFILAYLPRWQEPPQIYGGGG  177
             G NTPAIA  +A+Y +  AQ+ A M  Y +TA      L  +++ P I   GG
Sbjct  136  LGQNTPAIAVNEAEYGEMWAQDAAAMFGYAATAATATEALLPFEDAPLITNPGG  189



Lambda     K      H
   0.316    0.131    0.386 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 155520866304


  Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
    Posted date:  Sep 5, 2011  4:36 AM
  Number of letters in database: 5,219,829,388
  Number of sequences in database:  15,229,318



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40