BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv3434c
Length=237
Score E
Sequences producing significant alignments: (Bits) Value
gi|15610570|ref|NP_217951.1| transmembrane protein [Mycobacteriu... 469 1e-130
gi|31794611|ref|NP_857104.1| transmembrane protein [Mycobacteriu... 468 4e-130
gi|340628405|ref|YP_004746857.1| hypothetical protein MCAN_34511... 466 1e-129
gi|308232464|ref|ZP_07416118.2| conserved membrane protein [Myco... 460 7e-128
gi|240167808|ref|ZP_04746467.1| hypothetical protein MkanA1_0073... 395 2e-108
gi|183981136|ref|YP_001849427.1| hypothetical protein MMAR_1116 ... 380 9e-104
gi|118616647|ref|YP_904979.1| hypothetical protein MUL_0876 [Myc... 375 2e-102
gi|118462563|ref|YP_883510.1| hypothetical protein MAV_4375 [Myc... 352 3e-95
gi|254776805|ref|ZP_05218321.1| hypothetical protein MaviaA2_193... 351 6e-95
gi|41410353|ref|NP_963189.1| hypothetical protein MAP4255 [Mycob... 346 1e-93
gi|336460738|gb|EGO39627.1| hypothetical protein MAPs_37720 [Myc... 338 3e-91
gi|254818861|ref|ZP_05223862.1| hypothetical protein MintA_02994... 338 4e-91
gi|296168762|ref|ZP_06850453.1| transmembrane protein [Mycobacte... 337 1e-90
gi|342861892|ref|ZP_08718537.1| hypothetical protein MCOL_23500 ... 335 3e-90
gi|148824644|ref|YP_001289398.1| transmembrane protein [Mycobact... 325 3e-87
gi|254552538|ref|ZP_05142985.1| transmembrane protein [Mycobacte... 279 2e-73
gi|262200734|ref|YP_003271942.1| hypothetical protein Gbro_0732 ... 249 2e-64
gi|111020121|ref|YP_703093.1| hypothetical protein RHA1_ro03132 ... 192 2e-47
gi|254389412|ref|ZP_05004640.1| conserved hypothetical protein [... 190 2e-46
gi|111025339|ref|YP_707759.1| hypothetical protein RHA1_ro08557 ... 189 3e-46
gi|326383167|ref|ZP_08204856.1| hypothetical protein SCNU_09531 ... 184 1e-44
gi|312139742|ref|YP_004007078.1| integral membrane protein [Rhod... 182 3e-44
gi|325676807|ref|ZP_08156480.1| hypothetical protein HMPREF0724_... 181 7e-44
gi|229491466|ref|ZP_04385290.1| conserved hypothetical protein [... 173 2e-41
gi|226306104|ref|YP_002766064.1| hypothetical protein RER_26170 ... 172 3e-41
gi|29830503|ref|NP_825137.1| hypothetical protein SAV_3960 [Stre... 168 7e-40
gi|337766331|emb|CCB75042.1| conserved membrane protein of unkno... 159 2e-37
gi|297200579|ref|ZP_06917976.1| conserved hypothetical protein [... 158 5e-37
gi|311898363|dbj|BAJ30771.1| hypothetical protein KSE_49930 [Kit... 157 1e-36
gi|256391050|ref|YP_003112614.1| hypothetical protein Caci_1853 ... 144 1e-32
gi|329941455|ref|ZP_08290734.1| integral membrane protein [Strep... 142 5e-32
gi|254384851|ref|ZP_05000188.1| conserved hypothetical protein [... 140 1e-31
gi|302535644|ref|ZP_07287986.1| conserved hypothetical protein [... 140 2e-31
gi|294630034|ref|ZP_06708594.1| conserved hypothetical protein [... 139 3e-31
gi|256391043|ref|YP_003112607.1| hypothetical protein Caci_1845 ... 132 4e-29
gi|328883779|emb|CCA57018.1| hypothetical protein SVEN_3732 [Str... 131 1e-28
gi|108798170|ref|YP_638367.1| hypothetical protein Mmcs_1199 [My... 130 2e-28
gi|126433828|ref|YP_001069519.1| hypothetical protein Mjls_1226 ... 128 7e-28
gi|254552537|ref|ZP_05142984.1| hypothetical protein Mtube_19165... 100 2e-19
gi|297157288|gb|ADI07000.1| hypothetical protein SBI_03879 [Stre... 77.8 1e-12
gi|256394367|ref|YP_003115931.1| hypothetical protein Caci_5231 ... 75.9 4e-12
gi|294631361|ref|ZP_06709921.1| conserved hypothetical protein [... 75.9 5e-12
gi|29829510|ref|NP_824144.1| hypothetical protein SAV_2968 [Stre... 73.9 2e-11
gi|311898336|dbj|BAJ30744.1| hypothetical protein KSE_49660 [Kit... 66.2 3e-09
gi|342859957|ref|ZP_08716609.1| hypothetical protein MCOL_13795 ... 66.2 4e-09
gi|296139556|ref|YP_003646799.1| hypothetical protein Tpau_1844 ... 65.1 7e-09
gi|116511958|ref|YP_809174.1| hypothetical protein LACR_1221 [La... 64.3 2e-08
gi|254380906|ref|ZP_04996272.1| hypothetical protein SSAG_00574 ... 63.9 2e-08
gi|281491615|ref|YP_003353595.1| hypothetical protein LLKF_1145 ... 63.5 2e-08
gi|15673101|ref|NP_267275.1| hypothetical protein L132621 [Lacto... 63.5 3e-08
>gi|15610570|ref|NP_217951.1| transmembrane protein [Mycobacterium tuberculosis H37Rv]
gi|15843029|ref|NP_338066.1| hypothetical protein MT3540 [Mycobacterium tuberculosis CDC1551]
gi|121639355|ref|YP_979579.1| putative transmembrane protein [Mycobacterium bovis BCG str.
Pasteur 1173P2]
57 more sequence titles
Length=237
Score = 469 bits (1208), Expect = 1e-130, Method: Compositional matrix adjust.
Identities = 236/237 (99%), Positives = 237/237 (100%), Gaps = 0/237 (0%)
Query 1 VADASVVARLRSWALAVWHFVSNAPLTYAWLVVLVITTIIQNNLTGSQLHFVLLHRSTNI 60
+ADASVVARLRSWALAVWHFVSNAPLTYAWLVVLVITTIIQNNLTGSQLHFVLLHRSTNI
Sbjct 1 MADASVVARLRSWALAVWHFVSNAPLTYAWLVVLVITTIIQNNLTGSQLHFVLLHRSTNI 60
Query 61 AELGRDPLEVLFSSLLWIDGRNLEPYLLLFTLFLAPAEHWLGHLRWLTVGLTAHIGATYL 120
AELGRDPLEVLFSSLLWIDGRNLEPYLLLFTLFLAPAEHWLGHLRWLTVGLTAHIGATYL
Sbjct 61 AELGRDPLEVLFSSLLWIDGRNLEPYLLLFTLFLAPAEHWLGHLRWLTVGLTAHIGATYL 120
Query 121 SEGLLYLAIQHRDASERMVHARDIGVSYFLVGVMAVLTYHIAKPWRWGYLGVLLVIFGFP 180
SEGLLYLAIQHRDASERMVHARDIGVSYFLVGVMAVLTYHIAKPWRWGYLGVLLVIFGFP
Sbjct 121 SEGLLYLAIQHRDASERMVHARDIGVSYFLVGVMAVLTYHIAKPWRWGYLGVLLVIFGFP 180
Query 181 LIAMDKAELDFTAVGHFASILIGLLFYPMARERDGRLWNPARIKSLLHRRGTRGRRA 237
LIAMDKAELDFTAVGHFASILIGLLFYPMARERDGRLWNPARIKSLLHRRGTRGRRA
Sbjct 181 LIAMDKAELDFTAVGHFASILIGLLFYPMARERDGRLWNPARIKSLLHRRGTRGRRA 237
>gi|31794611|ref|NP_857104.1| transmembrane protein [Mycobacterium bovis AF2122/97]
gi|31620208|emb|CAD95651.1| POSSIBLE CONSERVED TRANSMEMBRANE PROTEIN [Mycobacterium bovis
AF2122/97]
Length=237
Score = 468 bits (1203), Expect = 4e-130, Method: Compositional matrix adjust.
Identities = 235/237 (99%), Positives = 236/237 (99%), Gaps = 0/237 (0%)
Query 1 VADASVVARLRSWALAVWHFVSNAPLTYAWLVVLVITTIIQNNLTGSQLHFVLLHRSTNI 60
+ADASVVARLRSWALAVWHFVSNAPLTYAWLVVLVITTIIQNNLTGSQLHFVLLHRSTNI
Sbjct 1 MADASVVARLRSWALAVWHFVSNAPLTYAWLVVLVITTIIQNNLTGSQLHFVLLHRSTNI 60
Query 61 AELGRDPLEVLFSSLLWIDGRNLEPYLLLFTLFLAPAEHWLGHLRWLTVGLTAHIGATYL 120
AELGRDPLEVLFSSLLWIDGRNLEPYLLLFTLFLAPAEHWLGHLRWLTVGLTAHIGATYL
Sbjct 61 AELGRDPLEVLFSSLLWIDGRNLEPYLLLFTLFLAPAEHWLGHLRWLTVGLTAHIGATYL 120
Query 121 SEGLLYLAIQHRDASERMVHARDIGVSYFLVGVMAVLTYHIAKPWRWGYLGVLLVIFGFP 180
SEGLLYLAIQHRDASERMVHARDIGVSYFLVGVMAVLTYHIAKPWRWGYLGVLLVIFGFP
Sbjct 121 SEGLLYLAIQHRDASERMVHARDIGVSYFLVGVMAVLTYHIAKPWRWGYLGVLLVIFGFP 180
Query 181 LIAMDKAELDFTAVGHFASILIGLLFYPMARERDGRLWNPARIKSLLHRRGTRGRRA 237
LIAMDKAELDFT VGHFASILIGLLFYPMARERDGRLWNPARIKSLLHRRGTRGRRA
Sbjct 181 LIAMDKAELDFTTVGHFASILIGLLFYPMARERDGRLWNPARIKSLLHRRGTRGRRA 237
>gi|340628405|ref|YP_004746857.1| hypothetical protein MCAN_34511 [Mycobacterium canettii CIPT
140010059]
gi|340006595|emb|CCC45782.1| putative conserved transmembrane protein [Mycobacterium canettii
CIPT 140010059]
Length=237
Score = 466 bits (1200), Expect = 1e-129, Method: Compositional matrix adjust.
Identities = 235/237 (99%), Positives = 236/237 (99%), Gaps = 0/237 (0%)
Query 1 VADASVVARLRSWALAVWHFVSNAPLTYAWLVVLVITTIIQNNLTGSQLHFVLLHRSTNI 60
+ADASVVARLRSWALAVWHFVSNAPLTYAWLVVLVITTIIQNNLTGSQLHFVLLHRSTNI
Sbjct 1 MADASVVARLRSWALAVWHFVSNAPLTYAWLVVLVITTIIQNNLTGSQLHFVLLHRSTNI 60
Query 61 AELGRDPLEVLFSSLLWIDGRNLEPYLLLFTLFLAPAEHWLGHLRWLTVGLTAHIGATYL 120
AELGRDPLEVLFSSLLWIDGRNLEPYLLLFTLFLAPAEHWLGHLRWLTVGLTAHIGATYL
Sbjct 61 AELGRDPLEVLFSSLLWIDGRNLEPYLLLFTLFLAPAEHWLGHLRWLTVGLTAHIGATYL 120
Query 121 SEGLLYLAIQHRDASERMVHARDIGVSYFLVGVMAVLTYHIAKPWRWGYLGVLLVIFGFP 180
SEGLLYLAIQHRDASERMVHARDIGVSYFLVGVMAVLTYHIAKPWRWGYLGVLLVIFGFP
Sbjct 121 SEGLLYLAIQHRDASERMVHARDIGVSYFLVGVMAVLTYHIAKPWRWGYLGVLLVIFGFP 180
Query 181 LIAMDKAELDFTAVGHFASILIGLLFYPMARERDGRLWNPARIKSLLHRRGTRGRRA 237
LIAMDKAELDFTAVGHFASILIGLLFYPMARERDGR WNPARIKSLLHRRGTRGRRA
Sbjct 181 LIAMDKAELDFTAVGHFASILIGLLFYPMARERDGRPWNPARIKSLLHRRGTRGRRA 237
>gi|308232464|ref|ZP_07416118.2| conserved membrane protein [Mycobacterium tuberculosis SUMu001]
gi|308372546|ref|ZP_07429011.2| hypothetical protein TMDG_03179 [Mycobacterium tuberculosis SUMu004]
gi|308373741|ref|ZP_07433518.2| conserved membrane protein [Mycobacterium tuberculosis SUMu005]
12 more sequence titles
Length=232
Score = 460 bits (1184), Expect = 7e-128, Method: Compositional matrix adjust.
Identities = 231/232 (99%), Positives = 232/232 (100%), Gaps = 0/232 (0%)
Query 6 VVARLRSWALAVWHFVSNAPLTYAWLVVLVITTIIQNNLTGSQLHFVLLHRSTNIAELGR 65
+VARLRSWALAVWHFVSNAPLTYAWLVVLVITTIIQNNLTGSQLHFVLLHRSTNIAELGR
Sbjct 1 MVARLRSWALAVWHFVSNAPLTYAWLVVLVITTIIQNNLTGSQLHFVLLHRSTNIAELGR 60
Query 66 DPLEVLFSSLLWIDGRNLEPYLLLFTLFLAPAEHWLGHLRWLTVGLTAHIGATYLSEGLL 125
DPLEVLFSSLLWIDGRNLEPYLLLFTLFLAPAEHWLGHLRWLTVGLTAHIGATYLSEGLL
Sbjct 61 DPLEVLFSSLLWIDGRNLEPYLLLFTLFLAPAEHWLGHLRWLTVGLTAHIGATYLSEGLL 120
Query 126 YLAIQHRDASERMVHARDIGVSYFLVGVMAVLTYHIAKPWRWGYLGVLLVIFGFPLIAMD 185
YLAIQHRDASERMVHARDIGVSYFLVGVMAVLTYHIAKPWRWGYLGVLLVIFGFPLIAMD
Sbjct 121 YLAIQHRDASERMVHARDIGVSYFLVGVMAVLTYHIAKPWRWGYLGVLLVIFGFPLIAMD 180
Query 186 KAELDFTAVGHFASILIGLLFYPMARERDGRLWNPARIKSLLHRRGTRGRRA 237
KAELDFTAVGHFASILIGLLFYPMARERDGRLWNPARIKSLLHRRGTRGRRA
Sbjct 181 KAELDFTAVGHFASILIGLLFYPMARERDGRLWNPARIKSLLHRRGTRGRRA 232
>gi|240167808|ref|ZP_04746467.1| hypothetical protein MkanA1_00730 [Mycobacterium kansasii ATCC
12478]
Length=241
Score = 395 bits (1016), Expect = 2e-108, Method: Compositional matrix adjust.
Identities = 193/233 (83%), Positives = 206/233 (89%), Gaps = 0/233 (0%)
Query 1 VADASVVARLRSWALAVWHFVSNAPLTYAWLVVLVITTIIQNNLTGSQLHFVLLHRSTNI 60
+ +ASV AR+RSWAL VWHFVSNAPLTY WL+VL ITTIIQN LTG QLH VLLHRSTNI
Sbjct 1 MTNASVSARVRSWALVVWHFVSNAPLTYTWLLVLAITTIIQNQLTGRQLHSVLLHRSTNI 60
Query 61 AELGRDPLEVLFSSLLWIDGRNLEPYLLLFTLFLAPAEHWLGHLRWLTVGLTAHIGATYL 120
LGRDPLEVLFSSLLWIDGRNLEPYLLLFTLFLAPAEHWLG LRWLTVGLTAHIGATY
Sbjct 61 RHLGRDPLEVLFSSLLWIDGRNLEPYLLLFTLFLAPAEHWLGQLRWLTVGLTAHIGATYF 120
Query 121 SEGLLYLAIQHRDASERMVHARDIGVSYFLVGVMAVLTYHIAKPWRWGYLGVLLVIFGFP 180
SEGLLY AIQ RDASER+V +RDIGVSYFLVGVMAVLTYHIAKPWRWGYLGVL VIFGFP
Sbjct 121 SEGLLYFAIQMRDASERLVQSRDIGVSYFLVGVMAVLTYHIAKPWRWGYLGVLFVIFGFP 180
Query 181 LIAMDKAELDFTAVGHFASILIGLLFYPMARERDGRLWNPARIKSLLHRRGTR 233
LI MDK ELDFTA+GHF +ILIGL FYPMARER WNPAR+K + +RG++
Sbjct 181 LITMDKTELDFTAIGHFTAILIGLAFYPMARERQRPAWNPARLKEIFRKRGSQ 233
>gi|183981136|ref|YP_001849427.1| hypothetical protein MMAR_1116 [Mycobacterium marinum M]
gi|183174462|gb|ACC39572.1| conserved hypothetical transmembrane protein [Mycobacterium marinum
M]
Length=237
Score = 380 bits (976), Expect = 9e-104, Method: Compositional matrix adjust.
Identities = 188/237 (80%), Positives = 208/237 (88%), Gaps = 2/237 (0%)
Query 1 VADASVVARLRSWALAVWHFVSNAPLTYAWLVVLVITTIIQNNLTGSQLHFVLLHRSTNI 60
+A ASV AR+RS ALAVWHFVS+APLTY WLVVL ITTIIQN+L G QLH V+LHRSTNI
Sbjct 1 MASASVSARVRSMALAVWHFVSSAPLTYTWLVVLAITTIIQNSLAGRQLHSVILHRSTNI 60
Query 61 AELGRDPLEVLFSSLLWIDGRNLEPYLLLFTLFLAPAEHWLGHLRWLTVGLTAHIGATYL 120
+ LGRDPLEVLFSSLLWIDGRNLEPYL+LFTLFLAPAEHWLGHLRWLTVGLT+HIGATY+
Sbjct 61 SHLGRDPLEVLFSSLLWIDGRNLEPYLVLFTLFLAPAEHWLGHLRWLTVGLTSHIGATYI 120
Query 121 SEGLLYLAIQHRDASERMVHARDIGVSYFLVGVMAVLTYHIAKPWRWGYLGVLLVIFGFP 180
SEGLLY AIQ R+A+ER+V++RDIGVSYFLVGVMAVLTYHI KPWRWGYL VLLVIFGFP
Sbjct 121 SEGLLYYAIQTREAAERLVYSRDIGVSYFLVGVMAVLTYHIVKPWRWGYLAVLLVIFGFP 180
Query 181 LIAMDKAELDFTAVGHFASILIGLLFYPMARERDGRLWNPARIKSLLHRRGTRGRRA 237
L+ MDK ELDFTA+GHF +ILIGL FYPMARER W PA+I+ +L R R R A
Sbjct 181 LLTMDKTELDFTAIGHFTAILIGLAFYPMARERGSPTWGPAKIREVL--RKLRSREA 235
>gi|118616647|ref|YP_904979.1| hypothetical protein MUL_0876 [Mycobacterium ulcerans Agy99]
gi|118568757|gb|ABL03508.1| conserved hypothetical transmembrane protein [Mycobacterium ulcerans
Agy99]
Length=237
Score = 375 bits (964), Expect = 2e-102, Method: Compositional matrix adjust.
Identities = 186/237 (79%), Positives = 206/237 (87%), Gaps = 2/237 (0%)
Query 1 VADASVVARLRSWALAVWHFVSNAPLTYAWLVVLVITTIIQNNLTGSQLHFVLLHRSTNI 60
+A ASV AR+RS ALAVWHFVS+APLTY WLVVL ITTIIQN+L G QLH V+LHRSTNI
Sbjct 1 MASASVSARVRSMALAVWHFVSSAPLTYTWLVVLAITTIIQNSLAGRQLHSVILHRSTNI 60
Query 61 AELGRDPLEVLFSSLLWIDGRNLEPYLLLFTLFLAPAEHWLGHLRWLTVGLTAHIGATYL 120
+ LGRDPLEVLFSSLLWIDGRNLEPYL+LFTLFLAPAEHWLG LRWLTVGLT+HIGATY+
Sbjct 61 SHLGRDPLEVLFSSLLWIDGRNLEPYLVLFTLFLAPAEHWLGQLRWLTVGLTSHIGATYI 120
Query 121 SEGLLYLAIQHRDASERMVHARDIGVSYFLVGVMAVLTYHIAKPWRWGYLGVLLVIFGFP 180
SEGLLY AIQ R+A+ER+V++RDIGVSYFLVGVMAVLTYHI KPWRWGYL VLLVIFGFP
Sbjct 121 SEGLLYYAIQTREAAERLVYSRDIGVSYFLVGVMAVLTYHIVKPWRWGYLAVLLVIFGFP 180
Query 181 LIAMDKAELDFTAVGHFASILIGLLFYPMARERDGRLWNPARIKSLLHRRGTRGRRA 237
L+ MDK ELDFTA+GHF +ILIGL FYPMARE W PA+I+ +L R R R A
Sbjct 181 LLTMDKTELDFTAIGHFTAILIGLAFYPMAREPGSPTWGPAKIREVL--RKLRSREA 235
>gi|118462563|ref|YP_883510.1| hypothetical protein MAV_4375 [Mycobacterium avium 104]
gi|118163850|gb|ABK64747.1| conserved hypothetical protein [Mycobacterium avium 104]
Length=234
Score = 352 bits (902), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 169/221 (77%), Positives = 194/221 (88%), Gaps = 0/221 (0%)
Query 10 LRSWALAVWHFVSNAPLTYAWLVVLVITTIIQNNLTGSQLHFVLLHRSTNIAELGRDPLE 69
+R AVWHFV +APLTY WL+VL+ITTIIQN LTG QLH VLLHRSTNI ELGRDPL+
Sbjct 1 MRGMTRAVWHFVISAPLTYGWLLVLMITTIIQNQLTGRQLHSVLLHRSTNIHELGRDPLD 60
Query 70 VLFSSLLWIDGRNLEPYLLLFTLFLAPAEHWLGHLRWLTVGLTAHIGATYLSEGLLYLAI 129
VLFSSLLWIDG+N EPYLLLFTLFLAPAEHWLG LRWLTVGL++HI ATY+SEG+LY AI
Sbjct 61 VLFSSLLWIDGKNFEPYLLLFTLFLAPAEHWLGQLRWLTVGLSSHILATYISEGILYFAI 120
Query 130 QHRDASERMVHARDIGVSYFLVGVMAVLTYHIAKPWRWGYLGVLLVIFGFPLIAMDKAEL 189
+ DASER+VHARDIGVSYFLVGVMAVLT+HIA+PWRWGYLGVL +IFGFPL+ MD+ EL
Sbjct 121 EKHDASERLVHARDIGVSYFLVGVMAVLTFHIARPWRWGYLGVLFLIFGFPLLTMDRVEL 180
Query 190 DFTAVGHFASILIGLLFYPMARERDGRLWNPARIKSLLHRR 230
+FTA+GHF SILIGL FYPM R + GR +PAR++++L RR
Sbjct 181 NFTAIGHFTSILIGLCFYPMTRAKGGRQLSPARLRTMLRRR 221
>gi|254776805|ref|ZP_05218321.1| hypothetical protein MaviaA2_19361 [Mycobacterium avium subsp.
avium ATCC 25291]
Length=231
Score = 351 bits (900), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 168/215 (79%), Positives = 192/215 (90%), Gaps = 0/215 (0%)
Query 16 AVWHFVSNAPLTYAWLVVLVITTIIQNNLTGSQLHFVLLHRSTNIAELGRDPLEVLFSSL 75
AVWHFV +APLTY WL+VL+ITTIIQN LTG QLH VLLHRSTNI ELGRDPL+VLFSSL
Sbjct 4 AVWHFVISAPLTYGWLLVLMITTIIQNQLTGRQLHSVLLHRSTNIHELGRDPLDVLFSSL 63
Query 76 LWIDGRNLEPYLLLFTLFLAPAEHWLGHLRWLTVGLTAHIGATYLSEGLLYLAIQHRDAS 135
LWIDG+N EPYLLLFTLFLAPAEHWLG LRWLTVGL++HI ATY+SEG+LY AI+ DAS
Sbjct 64 LWIDGKNFEPYLLLFTLFLAPAEHWLGQLRWLTVGLSSHILATYISEGILYFAIEKHDAS 123
Query 136 ERMVHARDIGVSYFLVGVMAVLTYHIAKPWRWGYLGVLLVIFGFPLIAMDKAELDFTAVG 195
ER+VHARDIGVSYFLVGVMAVLT+HIA+PWRWGYLGVL +IFGFPL+ MD+ EL+FTA+G
Sbjct 124 ERLVHARDIGVSYFLVGVMAVLTFHIARPWRWGYLGVLFLIFGFPLLTMDRVELNFTAIG 183
Query 196 HFASILIGLLFYPMARERDGRLWNPARIKSLLHRR 230
HF SILIGL FYPM R + GR +PAR++++L RR
Sbjct 184 HFTSILIGLCFYPMTRAKGGRQLSPARLRTMLRRR 218
>gi|41410353|ref|NP_963189.1| hypothetical protein MAP4255 [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|41399187|gb|AAS06805.1| hypothetical protein MAP_4255 [Mycobacterium avium subsp. paratuberculosis
K-10]
Length=243
Score = 346 bits (888), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 168/220 (77%), Positives = 190/220 (87%), Gaps = 0/220 (0%)
Query 1 VADASVVARLRSWALAVWHFVSNAPLTYAWLVVLVITTIIQNNLTGSQLHFVLLHRSTNI 60
+ ASV R+R AVWHFV +APLTY WL+VL+ITTIIQN LTG QLH VLLHRSTNI
Sbjct 1 MGQASVRGRVRGMTRAVWHFVISAPLTYGWLLVLMITTIIQNQLTGRQLHSVLLHRSTNI 60
Query 61 AELGRDPLEVLFSSLLWIDGRNLEPYLLLFTLFLAPAEHWLGHLRWLTVGLTAHIGATYL 120
ELGRDPL+VLFSSLLWIDG+N EPYLLLFTLFLAPAEHWLG LRWLTVGL++HI ATY+
Sbjct 61 HELGRDPLDVLFSSLLWIDGKNFEPYLLLFTLFLAPAEHWLGQLRWLTVGLSSHILATYI 120
Query 121 SEGLLYLAIQHRDASERMVHARDIGVSYFLVGVMAVLTYHIAKPWRWGYLGVLLVIFGFP 180
SEG+LY AI+ DASER+VHARDIGVSYFLVGVMAVLT+HIA+PWRWGYLGVL +IFGFP
Sbjct 121 SEGILYFAIEKHDASERLVHARDIGVSYFLVGVMAVLTFHIARPWRWGYLGVLFLIFGFP 180
Query 181 LIAMDKAELDFTAVGHFASILIGLLFYPMARERDGRLWNP 220
L+ MD+ EL+FTA+GHF SILIGL FYPM R + GR +P
Sbjct 181 LLTMDRVELNFTAIGHFTSILIGLCFYPMTRAKGGRQLSP 220
>gi|336460738|gb|EGO39627.1| hypothetical protein MAPs_37720 [Mycobacterium avium subsp. paratuberculosis
S397]
Length=231
Score = 338 bits (868), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 163/205 (80%), Positives = 183/205 (90%), Gaps = 0/205 (0%)
Query 16 AVWHFVSNAPLTYAWLVVLVITTIIQNNLTGSQLHFVLLHRSTNIAELGRDPLEVLFSSL 75
AVWHFV +APLTY WL+VL+ITTIIQN LTG QLH VLLHRSTNI ELGRDPL+VLFSSL
Sbjct 4 AVWHFVISAPLTYGWLLVLMITTIIQNQLTGRQLHSVLLHRSTNIHELGRDPLDVLFSSL 63
Query 76 LWIDGRNLEPYLLLFTLFLAPAEHWLGHLRWLTVGLTAHIGATYLSEGLLYLAIQHRDAS 135
LWIDG+N EPYLLLFTLFLAPAEHWLG LRWLTVGL++HI ATY+SEG+LY AI+ DAS
Sbjct 64 LWIDGKNFEPYLLLFTLFLAPAEHWLGQLRWLTVGLSSHILATYISEGILYFAIEKHDAS 123
Query 136 ERMVHARDIGVSYFLVGVMAVLTYHIAKPWRWGYLGVLLVIFGFPLIAMDKAELDFTAVG 195
ER+VHARDIGVSYFLVGVMAVLT+HIA+PWRWGYLGVL +IFGFPL+ MD+ EL+FTA+G
Sbjct 124 ERLVHARDIGVSYFLVGVMAVLTFHIARPWRWGYLGVLFLIFGFPLLTMDRVELNFTAIG 183
Query 196 HFASILIGLLFYPMARERDGRLWNP 220
HF SILIGL FYPM R + GR +P
Sbjct 184 HFTSILIGLCFYPMTRAKGGRQLSP 208
>gi|254818861|ref|ZP_05223862.1| hypothetical protein MintA_02994 [Mycobacterium intracellulare
ATCC 13950]
Length=224
Score = 338 bits (866), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 169/218 (78%), Positives = 192/218 (89%), Gaps = 2/218 (0%)
Query 14 ALAVWHFVSNAPLTYAWLVVLVITTIIQNNLTGSQLHFVLLHRSTNIAELGRDPLEVLFS 73
LAVWHFVS APLTY WL+VL++TTIIQN+LTG QLH VLLHRSTNI ELG+DPL VLFS
Sbjct 2 TLAVWHFVSTAPLTYGWLLVLMVTTIIQNHLTGRQLHSVLLHRSTNIHELGKDPLHVLFS 61
Query 74 SLLWIDGRNLEPYLLLFTLFLAPAEHWLGHLRWLTVGLTAHIGATYLSEGLLYLAIQHRD 133
SLLWIDG++ EPYLLLFTLFLAPAEHWLG LRWL+VGL++HI ATY+SEG+LY AI+ RD
Sbjct 62 SLLWIDGKSFEPYLLLFTLFLAPAEHWLGQLRWLSVGLSSHILATYISEGILYFAIEERD 121
Query 134 ASERMVHARDIGVSYFLVGVMAVLTYHIAKPWRWGYLGVLLVIFGFPLIAMDKAELDFTA 193
AS+R+VHARDIGVSYFLVGVMAVLTYHIA+PWRWGYLGVL VIFGFPLI MD+ +LDFTA
Sbjct 122 ASQRLVHARDIGVSYFLVGVMAVLTYHIARPWRWGYLGVLFVIFGFPLITMDRVDLDFTA 181
Query 194 VGHFASILIGLLFYPMARERDGRLW--NPARIKSLLHR 229
+GHFASILIGL FYPM R R R +PAR+K++ R
Sbjct 182 IGHFASILIGLCFYPMTRTRSRRSRQLSPARLKAMARR 219
>gi|296168762|ref|ZP_06850453.1| transmembrane protein [Mycobacterium parascrofulaceum ATCC BAA-614]
gi|295896564|gb|EFG76207.1| transmembrane protein [Mycobacterium parascrofulaceum ATCC BAA-614]
Length=237
Score = 337 bits (863), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 166/237 (71%), Positives = 196/237 (83%), Gaps = 0/237 (0%)
Query 1 VADASVVARLRSWALAVWHFVSNAPLTYAWLVVLVITTIIQNNLTGSQLHFVLLHRSTNI 60
+ +A V +RLRS LAVWH+VS+APLTY WL+VL+ITT IQ+ L QLH++L+H STNI
Sbjct 1 MTNAPVRSRLRSMGLAVWHYVSSAPLTYGWLLVLLITTFIQHWLPQRQLHWMLMHHSTNI 60
Query 61 AELGRDPLEVLFSSLLWIDGRNLEPYLLLFTLFLAPAEHWLGHLRWLTVGLTAHIGATYL 120
L RDPL+VLFSSLLWIDG NL PYL+LFTLFLAPAEHWLG LRWLTVGL+AHI +TY
Sbjct 61 HGLARDPLDVLFSSLLWIDGDNLTPYLILFTLFLAPAEHWLGQLRWLTVGLSAHILSTYF 120
Query 121 SEGLLYLAIQHRDASERMVHARDIGVSYFLVGVMAVLTYHIAKPWRWGYLGVLLVIFGFP 180
SEGLLY AI+ DASER+VHARDIGVSYFLVGVM VL YHIA+PWRWGYLGVL VIFGFP
Sbjct 121 SEGLLYFAIEKHDASERLVHARDIGVSYFLVGVMGVLAYHIARPWRWGYLGVLFVIFGFP 180
Query 181 LIAMDKAELDFTAVGHFASILIGLLFYPMARERDGRLWNPARIKSLLHRRGTRGRRA 237
L+AMD+ EL+FTA+GHF SILIGL FYPM R +D R +PA ++++ R+ +R A
Sbjct 181 LLAMDRIELNFTAIGHFTSILIGLCFYPMTRHKDPRQLSPAHLRAMARRQRSREASA 237
>gi|342861892|ref|ZP_08718537.1| hypothetical protein MCOL_23500 [Mycobacterium colombiense CECT
3035]
gi|342130709|gb|EGT84013.1| hypothetical protein MCOL_23500 [Mycobacterium colombiense CECT
3035]
Length=229
Score = 335 bits (860), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 166/223 (75%), Positives = 191/223 (86%), Gaps = 3/223 (1%)
Query 10 LRSWALAVWHFVSNAPLTYAWLVVLVITTIIQNNLTGSQLHFVLLHRSTNIAELGRDPLE 69
+RS LAVWHFV +APLTY WL+VL+ITTIIQ +LTG +LH VLLHRSTNI ELGRDPL+
Sbjct 1 MRSMTLAVWHFVISAPLTYGWLLVLMITTIIQTHLTGRELHSVLLHRSTNIHELGRDPLD 60
Query 70 VLFSSLLWIDGRNLEPYLLLFTLFLAPAEHWLGHLRWLTVGLTAHIGATYLSEGLLYLAI 129
VLFSSLLWIDG+N EPYLLLFTLFLAPAEHWLG LRWLTVGL++HI ATY+SEG+LY AI
Sbjct 61 VLFSSLLWIDGKNFEPYLLLFTLFLAPAEHWLGQLRWLTVGLSSHILATYISEGILYFAI 120
Query 130 QHRDASERMVHARDIGVSYFLVGVMAVLTYHIAKPWRWGYLGVLLVIFGFPLIAMDKAEL 189
+ DAS+R+VHARDIGVSYFLVGVMAVL YHIA PWRWGYLGVL +IFGFPLI M +EL
Sbjct 121 EEHDASQRLVHARDIGVSYFLVGVMAVLAYHIAPPWRWGYLGVLFIIFGFPLITMG-SEL 179
Query 190 DFTAVGHFASILIGLLFYPMARERD--GRLWNPARIKSLLHRR 230
+FTA+GHF SILIGL FYPM R R R +PAR+++++ R
Sbjct 180 NFTAIGHFTSILIGLCFYPMTRTRSKGSRQLSPARLRAMVRRN 222
>gi|148824644|ref|YP_001289398.1| transmembrane protein [Mycobacterium tuberculosis F11]
gi|148723171|gb|ABR07796.1| conserved transmembrane protein [Mycobacterium tuberculosis F11]
Length=162
Score = 325 bits (833), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 161/162 (99%), Positives = 162/162 (100%), Gaps = 0/162 (0%)
Query 76 LWIDGRNLEPYLLLFTLFLAPAEHWLGHLRWLTVGLTAHIGATYLSEGLLYLAIQHRDAS 135
+WIDGRNLEPYLLLFTLFLAPAEHWLGHLRWLTVGLTAHIGATYLSEGLLYLAIQHRDAS
Sbjct 1 MWIDGRNLEPYLLLFTLFLAPAEHWLGHLRWLTVGLTAHIGATYLSEGLLYLAIQHRDAS 60
Query 136 ERMVHARDIGVSYFLVGVMAVLTYHIAKPWRWGYLGVLLVIFGFPLIAMDKAELDFTAVG 195
ERMVHARDIGVSYFLVGVMAVLTYHIAKPWRWGYLGVLLVIFGFPLIAMDKAELDFTAVG
Sbjct 61 ERMVHARDIGVSYFLVGVMAVLTYHIAKPWRWGYLGVLLVIFGFPLIAMDKAELDFTAVG 120
Query 196 HFASILIGLLFYPMARERDGRLWNPARIKSLLHRRGTRGRRA 237
HFASILIGLLFYPMARERDGRLWNPARIKSLLHRRGTRGRRA
Sbjct 121 HFASILIGLLFYPMARERDGRLWNPARIKSLLHRRGTRGRRA 162
>gi|254552538|ref|ZP_05142985.1| transmembrane protein [Mycobacterium tuberculosis '98-R604 INH-RIF-EM']
Length=142
Score = 279 bits (714), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 141/142 (99%), Positives = 142/142 (100%), Gaps = 0/142 (0%)
Query 1 VADASVVARLRSWALAVWHFVSNAPLTYAWLVVLVITTIIQNNLTGSQLHFVLLHRSTNI 60
+ADASVVARLRSWALAVWHFVSNAPLTYAWLVVLVITTIIQNNLTGSQLHFVLLHRSTNI
Sbjct 1 MADASVVARLRSWALAVWHFVSNAPLTYAWLVVLVITTIIQNNLTGSQLHFVLLHRSTNI 60
Query 61 AELGRDPLEVLFSSLLWIDGRNLEPYLLLFTLFLAPAEHWLGHLRWLTVGLTAHIGATYL 120
AELGRDPLEVLFSSLLWIDGRNLEPYLLLFTLFLAPAEHWLGHLRWLTVGLTAHIGATYL
Sbjct 61 AELGRDPLEVLFSSLLWIDGRNLEPYLLLFTLFLAPAEHWLGHLRWLTVGLTAHIGATYL 120
Query 121 SEGLLYLAIQHRDASERMVHAR 142
SEGLLYLAIQHRDASERMVHAR
Sbjct 121 SEGLLYLAIQHRDASERMVHAR 142
>gi|262200734|ref|YP_003271942.1| hypothetical protein Gbro_0732 [Gordonia bronchialis DSM 43247]
gi|262084081|gb|ACY20049.1| hypothetical protein Gbro_0732 [Gordonia bronchialis DSM 43247]
Length=231
Score = 249 bits (637), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 132/227 (59%), Positives = 160/227 (71%), Gaps = 4/227 (1%)
Query 8 ARLRSWALAVWHFVSNAPLTYAWLVVLVITTIIQNNLTGSQLHFVLLHRSTNIAELGRDP 67
ARLRS AVW VS+APLT AWLVV+++TTI+Q++ + QLH +L+ RSTN+ L DP
Sbjct 8 ARLRSVPRAVWSVVSSAPLTCAWLVVMLVTTIVQHSASPEQLHHILVTRSTNLHHLTTDP 67
Query 68 LEVLFSSLLWIDGRNLEPYLLLFTLFLAPAEHWLGHLRWLTVGLTAHIGATYLSEGLLYL 127
L VLF+SL W+DG PYLL F +F PAE WLG LRWL VGL+AH+ ATY+SEGLL L
Sbjct 68 LHVLFTSLFWLDGAYWLPYLLAFAIFHIPAERWLGSLRWLLVGLSAHVLATYISEGLLGL 127
Query 128 AIQHRDASERMVHARDIGVSYFLVGVMAVLTYHIAKPWRWGYLGVLLVIFGFPLIAMDKA 187
AI+ A E MVH D+GVSYFL G++AVLTY IA PWRW YL ++V++G PLI
Sbjct 128 AIRDGVAGESMVHVTDVGVSYFLAGIVAVLTYRIATPWRWVYLAGVIVVYGAPLI----T 183
Query 188 ELDFTAVGHFASILIGLLFYPMARERDGRLWNPARIKSLLHRRGTRG 234
L FTA+GHFAS+LIGL FYP+ R RD WNP L R TR
Sbjct 184 ALTFTAIGHFASVLIGLAFYPITRGRDTAPWNPLDTVRALRSRLTRA 230
>gi|111020121|ref|YP_703093.1| hypothetical protein RHA1_ro03132 [Rhodococcus jostii RHA1]
gi|110819651|gb|ABG94935.1| conserved hypothetical protein [Rhodococcus jostii RHA1]
Length=228
Score = 192 bits (489), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 104/218 (48%), Positives = 135/218 (62%), Gaps = 5/218 (2%)
Query 3 DASVVARLRSWALAVWHFVSNAPLTYAWLVVLVITTIIQNNLTGSQLHFVLLHRSTNIAE 62
D ++ +RLRS A W +V AP TY WL +L++T+++ NL L VL RSTN+
Sbjct 2 DIAISSRLRSLPRAAWTYVRRAPGTYIWLAILLVTSVVMKNLLPDDLARVLGDRSTNLHH 61
Query 63 LGRDPLEVLFSSLLWIDGRNLEPYLLLFTLFLAPAEHWLGHLRWLTVGLTAHIGATYLSE 122
L DP+ VL SS W+ G Y + F +F PAE WLG LRWL V + AH+GATY+SE
Sbjct 62 LAEDPVRVLISSAFWLAGGGWITYFISFNIFHVPAERWLGTLRWLCVVVIAHVGATYISE 121
Query 123 GLLYLAIQHRDASERMVHARDIGVSYFLVGVMAVLTYHIAKPWRWGYLGVLLVIFGFPLI 182
G+LY AI+H A V DIGVSY L GV+AVLTY IA PWR+ Y+ +L F PL
Sbjct 122 GVLYWAIRHGHAPASAVDTLDIGVSYGLAGVIAVLTYRIASPWRYLYVAAVLAFFAVPLF 181
Query 183 AMDKAELDFTAVGHFASILIGLLFYPMARERDGRLWNP 220
+L+FTA+GHF + L+GL YP+ R G W+P
Sbjct 182 ----IDLNFTAIGHFTAALLGLGCYPLVRSHRGT-WSP 214
>gi|254389412|ref|ZP_05004640.1| conserved hypothetical protein [Streptomyces clavuligerus ATCC
27064]
gi|294817085|ref|ZP_06775727.1| Hypothetical protein SCLAV_p0546 [Streptomyces clavuligerus ATCC
27064]
gi|326446026|ref|ZP_08220760.1| hypothetical protein SclaA2_33397 [Streptomyces clavuligerus
ATCC 27064]
gi|197703127|gb|EDY48939.1| conserved hypothetical protein [Streptomyces clavuligerus ATCC
27064]
gi|294321900|gb|EFG04035.1| Hypothetical protein SCLAV_p0546 [Streptomyces clavuligerus ATCC
27064]
Length=245
Score = 190 bits (482), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 109/231 (48%), Positives = 144/231 (63%), Gaps = 5/231 (2%)
Query 3 DASVVARLRSWALAVWHFVSNAPLTYAWLVVLVITTIIQNNLTGSQLHFVLLHRSTNIAE 62
D + +R+ V +V AP TY WL +L +TT++ ++++ L RSTNI +
Sbjct 20 DPAPAGAIRTAFARVLAYVRGAPGTYIWLAILFVTTVLMHHMSPEFEEDFLRRRSTNIQQ 79
Query 63 LGRDPLEVLFSSLLWIDGRNLEPYLLLFTLFLAPAEHWLGHLRWLTVGLTAHIGATYLSE 122
L DP+ VL SS LWIDG + Y +L+T+F A AEHWLG LRWLTV + AH+ AT++SE
Sbjct 80 LSTDPVRVLISSALWIDGGSWLFYAVLYTVFHASAEHWLGTLRWLTVAVLAHVLATFISE 139
Query 123 GLLYLAIQHRDASERMVHARDIGVSYFLVGVMAVLTYHIAKPWRWGYLGVLLVIFGFPLI 182
G L AI+H A E +H DIGVSY L GV+AVLTY IA PWR+ YL +L+++G PL+
Sbjct 140 GALLWAIRHGLAPESAMHTLDIGVSYALAGVVAVLTYRIASPWRYVYLAGVLLVYGLPLV 199
Query 183 AMDKAELDFTAVGHFASILIGLLFYPMARERDGRLWNPARIKSLLHRRGTR 233
+ FT +GHF S+LIGL YP+ R R G WNPA RR R
Sbjct 200 SGRT----FTDLGHFTSVLIGLACYPLTRHR-GPAWNPADTLVRALRRPRR 245
>gi|111025339|ref|YP_707759.1| hypothetical protein RHA1_ro08557 [Rhodococcus jostii RHA1]
gi|110824318|gb|ABG99601.1| conserved hypothetical protein [Rhodococcus jostii RHA1]
Length=233
Score = 189 bits (480), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 103/218 (48%), Positives = 134/218 (62%), Gaps = 5/218 (2%)
Query 3 DASVVARLRSWALAVWHFVSNAPLTYAWLVVLVITTIIQNNLTGSQLHFVLLHRSTNIAE 62
DA++ +RLR + A W +V AP TY WL +L++T+++ NL L VL RSTN+
Sbjct 7 DAAISSRLRPFPRAAWTYVRRAPGTYIWLAILLVTSVVMRNLPPEVLARVLGDRSTNLHH 66
Query 63 LGRDPLEVLFSSLLWIDGRNLEPYLLLFTLFLAPAEHWLGHLRWLTVGLTAHIGATYLSE 122
L DP+ VL SS W+ G Y + F +F PAE WLG LRWL V + AH+GATY+SE
Sbjct 67 LAEDPVRVLISSAFWLAGGGWITYFISFNIFHVPAERWLGTLRWLGVVVIAHVGATYISE 126
Query 123 GLLYLAIQHRDASERMVHARDIGVSYFLVGVMAVLTYHIAKPWRWGYLGVLLVIFGFPLI 182
G LY AI+H A V DIGVSY L GV+AVLTY IA PWR+ Y+ +L F PL
Sbjct 127 GALYWAIRHGHAPASAVDTLDIGVSYGLAGVIAVLTYRIAPPWRYLYVTAVLAFFAVPLF 186
Query 183 AMDKAELDFTAVGHFASILIGLLFYPMARERDGRLWNP 220
+L+FTA+GHF + L+GL YP+ R W+P
Sbjct 187 ----VDLNFTAIGHFTAALLGLGCYPLVRSHRST-WSP 219
>gi|326383167|ref|ZP_08204856.1| hypothetical protein SCNU_09531 [Gordonia neofelifaecis NRRL
B-59395]
gi|326198303|gb|EGD55488.1| hypothetical protein SCNU_09531 [Gordonia neofelifaecis NRRL
B-59395]
Length=236
Score = 184 bits (466), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 92/193 (48%), Positives = 128/193 (67%), Gaps = 3/193 (1%)
Query 21 VSNAPLTYAWLVVLVITTIIQNNLTGSQLHFVLLHRSTNIAELGRDPLEVLFSSLLWIDG 80
+ +AP+TY+WLVVL+ TTI+Q+N++ +L +L RSTNI L DPL F SL W+DG
Sbjct 19 IRSAPVTYSWLVVLLATTIVQHNVSADRLDQILGKRSTNIDNLLHDPLRAFFGSLFWLDG 78
Query 81 RNLEPYLLLFTLFLAPAEHWLGHLRWLTVGLTAHIGATYLSEGLLYLAIQHRDASERMVH 140
PY + FT+FLA AE W+G R++ VGLT H+ AT +S+GL+ AI H DA + +
Sbjct 79 AYWVPYFIGFTIFLATAERWIGSRRYVVVGLTGHVLATLISQGLVGAAIAHGDADSSLTY 138
Query 141 ARDIGVSYFLVGVMAVLTYHIAKPWRWGYLGVLLVIFGFPLIAMDKAELDFTAVGHFASI 200
A D+GVSYF+ V+AVL Y++ +PWRW Y+ + F PL+ + FTAVGH +++
Sbjct 139 ATDVGVSYFMASVIAVLAYYLPRPWRWVYIVGAMGFFYLPLVL---EPVTFTAVGHASAL 195
Query 201 LIGLLFYPMARER 213
IG FYPM R R
Sbjct 196 TIGFAFYPMTRGR 208
>gi|312139742|ref|YP_004007078.1| integral membrane protein [Rhodococcus equi 103S]
gi|311889081|emb|CBH48394.1| putative integral membrane protein [Rhodococcus equi 103S]
Length=221
Score = 182 bits (463), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 105/219 (48%), Positives = 140/219 (64%), Gaps = 6/219 (2%)
Query 14 ALAVWHFVSNAPLTYAWLVVLVITTIIQNNLTGSQLHFVLLHRSTNIAELGRDPLEVLFS 73
A A W +V AP T+ WL +L +TT++ ++L+ L+ VL RSTN+ L DP+ VL +
Sbjct 5 ASAAWGYVRRAPGTFVWLAILFVTTVVMHHLSPQVLNDVLGDRSTNLHHLREDPIRVLVT 64
Query 74 SLLWIDGRNLEPYLLLFTLFLAPAEHWLGHLRWLTVGLTAHIGATYLSEGLLYLAIQHRD 133
S WI G Y LLF LF P E WLG RWL+V + AH+GATY+SEG+LYLAIQH
Sbjct 65 SAFWIAGGTWIGYFLLFNLFHVPVERWLGSWRWLSVAVIAHVGATYISEGVLYLAIQHHR 124
Query 134 ASERMVHARDIGVSYFLVGVMAVLTYHIAKPWRWGYLGVLLVIFGFPLIAMDKAELDFTA 193
A E V+ D+GVSY L GVMAVL Y IA PWR+ Y+ +L+++G PL L FT
Sbjct 125 APESAVNTLDVGVSYALAGVMAVLAYRIAPPWRYVYVVGVLLVYGLPLF----GGLTFTD 180
Query 194 VGHFASILIGLLFYPMARERDGRLWNPAR-IKSLLHRRG 231
+GHF ++LIG YP+ R R G +W+PA ++ + R G
Sbjct 181 IGHFTAVLIGFGCYPLTRSRPG-VWDPADWLRGMRQRVG 218
>gi|325676807|ref|ZP_08156480.1| hypothetical protein HMPREF0724_14263 [Rhodococcus equi ATCC
33707]
gi|325552355|gb|EGD22044.1| hypothetical protein HMPREF0724_14263 [Rhodococcus equi ATCC
33707]
Length=229
Score = 181 bits (459), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 104/219 (48%), Positives = 138/219 (64%), Gaps = 5/219 (2%)
Query 3 DASVVARLRSWALAVWHFVSNAPLTYAWLVVLVITTIIQNNLTGSQLHFVLLHRSTNIAE 62
+A R+ A A W +V AP T+ WL +L +TT++ ++L+ L+ VL RSTN+
Sbjct 2 EAERRVRVSDVASAAWGYVRRAPGTFVWLAILFVTTVVMHHLSPQVLNDVLGDRSTNLHH 61
Query 63 LGRDPLEVLFSSLLWIDGRNLEPYLLLFTLFLAPAEHWLGHLRWLTVGLTAHIGATYLSE 122
L DP+ VL +S WI G Y LLF LF P E WLG RWL+V + AH+GATY+SE
Sbjct 62 LREDPIRVLVTSAFWIAGGTWIGYFLLFNLFHVPVERWLGTWRWLSVAVIAHVGATYISE 121
Query 123 GLLYLAIQHRDASERMVHARDIGVSYFLVGVMAVLTYHIAKPWRWGYLGVLLVIFGFPLI 182
G+LYLAIQH A E V+ D+GVSY L GV AVL Y IA PWR+ Y+ +L+++G PL
Sbjct 122 GVLYLAIQHHRAPESAVNTLDVGVSYALAGVTAVLAYRIAPPWRYVYVVGVLLVYGLPLF 181
Query 183 AMDKAELDFTAVGHFASILIGLLFYPMARERDGRLWNPA 221
L FT +GHF ++LIG YP+ R R G +W+PA
Sbjct 182 ----GGLTFTDIGHFTAVLIGFGCYPLTRSRPG-VWDPA 215
>gi|229491466|ref|ZP_04385290.1| conserved hypothetical protein [Rhodococcus erythropolis SK121]
gi|229321751|gb|EEN87548.1| conserved hypothetical protein [Rhodococcus erythropolis SK121]
Length=219
Score = 173 bits (439), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 100/207 (49%), Positives = 131/207 (64%), Gaps = 5/207 (2%)
Query 14 ALAVWHFVSNAPLTYAWLVVLVITTIIQNNLTGSQLHFVLLHRSTNIAELGRDPLEVLFS 73
A A W +V +AP TY WL+ L+ TT+ +L + L RSTN+ L DPL VLFS
Sbjct 5 AKAAWRWVRSAPGTYVWLLALLFTTLFLRHLPDNVEERFLGKRSTNLHHLAEDPLRVLFS 64
Query 74 SLLWIDGRNLEPYLLLFTLFLAPAEHWLGHLRWLTVGLTAHIGATYLSEGLLYLAIQHRD 133
S W++G YL+LFT+F A AE WLG RWL V + AH+GATY+SEG+LY I+H
Sbjct 65 SAFWLEGGGWLGYLVLFTIFHATAERWLGTWRWLCVVVIAHVGATYISEGVLYEGIRHGY 124
Query 134 ASERMVHARDIGVSYFLVGVMAVLTYHIAKPWRWGYLGVLLVIFGFPLIAMDKAELDFTA 193
+E V+ D+GVSY L GVM +L Y I PWR+ YL LL+ +G PLI +FTA
Sbjct 125 VAESAVNTLDVGVSYGLAGVMGILVYRIVDPWRYVYLAGLLLFYGVPLIFAT----NFTA 180
Query 194 VGHFASILIGLLFYPMARERDGRLWNP 220
+GH +++L+GL YP+ R R G WNP
Sbjct 181 IGHMSALLLGLACYPITRARAGT-WNP 206
>gi|226306104|ref|YP_002766064.1| hypothetical protein RER_26170 [Rhodococcus erythropolis PR4]
gi|226185221|dbj|BAH33325.1| conserved hypothetical membrane protein [Rhodococcus erythropolis
PR4]
Length=221
Score = 172 bits (437), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 100/212 (48%), Positives = 133/212 (63%), Gaps = 5/212 (2%)
Query 9 RLRSWALAVWHFVSNAPLTYAWLVVLVITTIIQNNLTGSQLHFVLLHRSTNIAELGRDPL 68
R+ A A W +V +AP TY WL+ L+ TT+ +L + L RSTN+ L DPL
Sbjct 2 RMLGAAKAAWRWVRSAPGTYVWLLALLFTTLFLRHLPDNVEERFLGKRSTNLHHLAEDPL 61
Query 69 EVLFSSLLWIDGRNLEPYLLLFTLFLAPAEHWLGHLRWLTVGLTAHIGATYLSEGLLYLA 128
VLFSS W++G YL+LFT+F A AE WLG RWL V + AH+GATY+SEG+LY
Sbjct 62 RVLFSSAFWLEGGGWLGYLVLFTIFHATAERWLGTWRWLCVVVIAHVGATYISEGVLYEG 121
Query 129 IQHRDASERMVHARDIGVSYFLVGVMAVLTYHIAKPWRWGYLGVLLVIFGFPLIAMDKAE 188
I+H +E V+ D+GVSY L G+M +L Y I PWR+ YL LL+ +G PLI
Sbjct 122 IRHGYVAESAVNTLDVGVSYGLAGIMGILVYRIVDPWRFVYLAGLLLFYGVPLIFAT--- 178
Query 189 LDFTAVGHFASILIGLLFYPMARERDGRLWNP 220
+FTA+GH +++L+GL YP+ R R G WNP
Sbjct 179 -NFTAIGHMSALLLGLACYPITRARAGT-WNP 208
>gi|29830503|ref|NP_825137.1| hypothetical protein SAV_3960 [Streptomyces avermitilis MA-4680]
gi|29607615|dbj|BAC71672.1| hypothetical protein [Streptomyces avermitilis MA-4680]
Length=196
Score = 168 bits (425), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 95/191 (50%), Positives = 122/191 (64%), Gaps = 5/191 (2%)
Query 30 WLVVLVITTIIQNNLTGSQLHFVLLHRSTNIAELGRDPLEVLFSSLLWIDGRNLEPYLLL 89
WL +L +TT+ ++++ L RSTNI EL RDP+ VL +S +WIDG + PY +L
Sbjct 2 WLAILFVTTVALHHMSPDFEEDFLRQRSTNIHELSRDPVRVLITSAMWIDGGHWLPYAVL 61
Query 90 FTLFLAPAEHWLGHLRWLTVGLTAHIGATYLSEGLLYLAIQHRDASERMVHARDIGVSYF 149
FT+F A AE WLG RWL V + AH+ AT SEG L AI+ A V+ DIGVSY
Sbjct 62 FTVFHAQAERWLGTPRWLAVCVAAHVLATLASEGALLEAIRDGVAPRSAVNTLDIGVSYA 121
Query 150 LVGVMAVLTYHIAKPWRWGYLGVLLVIFGFPLIAMDKAELDFTAVGHFASILIGLLFYPM 209
L GV+AVLTY IA+PWR+GYL V+L ++G L A FT GHF ++LIGL P+
Sbjct 122 LAGVIAVLTYRIAEPWRYGYLVVVLAVYGGSL----AASPTFTDFGHFLALLIGLACCPL 177
Query 210 ARERDGRLWNP 220
AR R G+ WNP
Sbjct 178 ARGR-GKAWNP 187
>gi|337766331|emb|CCB75042.1| conserved membrane protein of unknown function [Streptomyces
cattleya NRRL 8057]
Length=223
Score = 159 bits (403), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 90/202 (45%), Positives = 118/202 (59%), Gaps = 4/202 (1%)
Query 10 LRSWALAVWHFVSNAPLTYAWLVVLVITTIIQNNLTGSQLHFVLLHRSTNIAELGRDPLE 69
LR A W ++ AP T+ WL VL+ TT + ++ L HRSTN+ L R P+
Sbjct 6 LRRAPGAAWRYLRAAPGTFVWLAVLLATTRLVHHFPPGFRDRFLEHRSTNVHNLWRTPVR 65
Query 70 VLFSSLLWIDGRNLEPYLLLFTLFLAPAEHWLGHLRWLTVGLTAHIGATYLSEGLLYLAI 129
VL +S L++DG Y +L+ LF P E WLG RWL V AH+GATYLSEGL+ LA+
Sbjct 66 VLVASALYLDGGGWPLYFVLYNLFHVPVERWLGTWRWLGVAAVAHVGATYLSEGLVLLAV 125
Query 130 QHRDASERMVHARDIGVSYFLVGVMAVLTYHIAKPWRWGYLGVLLVIFGFPLIAMDKAEL 189
+ A + RDIGVSY L GV LT+ + +PWR+GYL LL ++GF L A+
Sbjct 126 RTGYAPHSALFTRDIGVSYALAGVQGALTHRLPRPWRYGYLACLLGVYGFAL----AADR 181
Query 190 DFTAVGHFASILIGLLFYPMAR 211
FT VGH + L+GL P AR
Sbjct 182 TFTGVGHLTAALLGLACVPAAR 203
>gi|297200579|ref|ZP_06917976.1| conserved hypothetical protein [Streptomyces sviceus ATCC 29083]
gi|197709705|gb|EDY53739.1| conserved hypothetical protein [Streptomyces sviceus ATCC 29083]
Length=232
Score = 158 bits (400), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 89/188 (48%), Positives = 115/188 (62%), Gaps = 4/188 (2%)
Query 17 VWHFVSNAPLTYAWLVVLVITTIIQNNLTGSQLHFVLLHRSTNIAELGRDPLEVLFSSLL 76
VW +V +AP TY WL VL +TT+ ++++ L RSTNI EL +PL VL SS +
Sbjct 25 VWTYVRSAPGTYVWLAVLFVTTVALHHMSPEFEEEFLRQRSTNIHELSSNPLRVLVSSAM 84
Query 77 WIDGRNLEPYLLLFTLFLAPAEHWLGHLRWLTVGLTAHIGATYLSEGLLYLAIQHRDASE 136
WID + PY++L++LF APAE WLG RWL V AH+ AT +SEG L I+H A
Sbjct 85 WIDSGHWLPYVVLYSLFHAPAERWLGTARWLAVCAAAHVLATLISEGALLWGIRHGMAPA 144
Query 137 RMVHARDIGVSYFLVGVMAVLTYHIAKPWRWGYLGVLLVIFGFPLIAMDKAELDFTAVGH 196
V+ DIGVSY L GV+ VL Y I PWR+ Y V+LV++ PL+ FT +GH
Sbjct 145 SAVNTLDIGVSYALAGVVGVLVYRIPAPWRYVYGFVVLVVYAVPLVTGR----TFTDLGH 200
Query 197 FASILIGL 204
F S LIG
Sbjct 201 FTSALIGF 208
>gi|311898363|dbj|BAJ30771.1| hypothetical protein KSE_49930 [Kitasatospora setae KM-6054]
Length=220
Score = 157 bits (398), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 92/214 (43%), Positives = 126/214 (59%), Gaps = 10/214 (4%)
Query 13 WALAVW----HFVSNAPLTYAWLVVLVITTIIQNNLTGSQLHFVLLHRSTNIAELGRDPL 68
W AVW +V+ +P TY WL++L T+ + + + L + L RSTNI +L P+
Sbjct 3 WVRAVWRWVRQWVAKSPGTYVWLLLLAFTSFVVARMDPAALDYFLQKRSTNIDQLSSRPV 62
Query 69 EVLFSSLLWIDGRNLEPYLLLFTLFLAPAEHWLGHLRWLTVGLTAHIGATYLSEGLLYLA 128
L +SL+W + N Y ++F +F PAE WLG RWLTV LT+H+ AT++SEG++
Sbjct 63 HALLASLIWTEQSNFLFYFVVFHVFHVPAERWLGTRRWLTVALTSHVLATFVSEGVVAWG 122
Query 129 IQHRDASERMVHARDIGVSYFLVGVMAVLTYHIAKPWRWGYLGVLLVIFGFPLIAMDKAE 188
+ H M D+GVSY L GV VLTY +A WRW Y G+ LV GF L+ + A
Sbjct 123 VHHHVLPANMSTTVDVGVSYALAGVEGVLTYALAGAWRWVY-GIGLV--GFYLVPL-LAS 178
Query 189 LDFTAVGHFASILIGLLFYPMARERDGRLWNPAR 222
FT +GHF S+LIGL FYP+ R R W+P R
Sbjct 179 HTFTDLGHFCSVLIGLAFYPITRGRPS--WDPWR 210
>gi|256391050|ref|YP_003112614.1| hypothetical protein Caci_1853 [Catenulispora acidiphila DSM
44928]
gi|256357276|gb|ACU70773.1| conserved hypothetical protein [Catenulispora acidiphila DSM
44928]
Length=233
Score = 144 bits (363), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 87/193 (46%), Positives = 115/193 (60%), Gaps = 5/193 (2%)
Query 20 FVSNAPLTYAWLVVLVITTIIQNNLTGSQLHFVLLHRSTNIAELGRDPLEVLFSSLLWID 79
++ +AP TY WL++L++TT I +++ H++L RSTNI L DPL VL S LWID
Sbjct 12 YLRSAPGTYLWLLILLVTTAILRHVSPHTEHWILERRSTNIHYLMEDPLRVLIQSALWID 71
Query 80 GRNLEPYLLLFTLFLAPAEHWLGHLRWLTVGLTAHIGATYLSEGLLYLAIQHRDASERMV 139
G + Y L+TLF A AE WLG RWL V L +H+ ATY+SEG L AI + +
Sbjct 72 GGSWLFYAALYTLFHAQAERWLGTWRWLAVALISHVLATYVSEGALAWAIHNGTVPQSKR 131
Query 140 HARDIGVSYFLVGVMAVLTYHIAKPW-RWGYLGVLLVIFGFPLIAMDKAELDFTAVGHFA 198
+ D GVSY L GV+AVL Y + W RW Y +L +G AM + FT VGHF
Sbjct 132 YTLDYGVSYALAGVIAVLAYWWPRGWMRWVYAAAVLAFYG---QAMLRGR-TFTDVGHFT 187
Query 199 SILIGLLFYPMAR 211
+ L+GL YP+ R
Sbjct 188 ATLVGLGCYPLTR 200
>gi|329941455|ref|ZP_08290734.1| integral membrane protein [Streptomyces griseoaurantiacus M045]
gi|329299986|gb|EGG43885.1| integral membrane protein [Streptomyces griseoaurantiacus M045]
Length=220
Score = 142 bits (357), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 94/215 (44%), Positives = 116/215 (54%), Gaps = 5/215 (2%)
Query 11 RSW-ALAVWHFVSNAPLTYAWLVVLVITTIIQNNLTGSQLHFVLLHRSTNIAELGRDPLE 69
R+W A +W V +AP TY WL+ L+ TT+ + ++ H LLHRSTNI EL P+
Sbjct 10 RAWRAGRLWDHVRSAPGTYLWLLALLGTTLALHRMSPEFAHKFLLHRSTNIHELSEHPVR 69
Query 70 VLFSSLLWIDGRNLEPYLLLFTLFLAPAEHWLGHLRWLTVGLTAHIGATYLSEGLLYLAI 129
VL SS LW D + PY L+ LF A AEHWLG RWLTV AH+ AT SEG L AI
Sbjct 70 VLVSSALWTDDGHWLPYAALYALFHARAEHWLGTARWLTVCAAAHVLATLASEGALLWAI 129
Query 130 QHRDASERMVHARDIGVSYFLVGVMAVLTYHIAKPWRWGYLGVLLVIFGFPLIAMDKAEL 189
A V D GVSY L GVM +LTY + +PWR Y VLL PL+
Sbjct 130 HLGRAPHSAVDTLDTGVSYALAGVMGILTYRVPRPWRHAYAAVLLTALTVPLLTHHT--- 186
Query 190 DFTAVGHFASILIGLLFYPMARERDGRLWNPARIK 224
T +GH ++L GL +P+ R R RI
Sbjct 187 -VTDLGHLLALLTGLACHPLTRTRPHTHTEKTRID 220
>gi|254384851|ref|ZP_05000188.1| conserved hypothetical protein [Streptomyces sp. Mg1]
gi|194343733|gb|EDX24699.1| conserved hypothetical protein [Streptomyces sp. Mg1]
Length=215
Score = 140 bits (354), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 85/205 (42%), Positives = 120/205 (59%), Gaps = 14/205 (6%)
Query 10 LRSWALAVWHFVSNAPLTYAWLVVLVITTIIQNNLTGSQLHFVLLHR-STNIAELGRDPL 68
LRSW + ++P T+ WL+++ +T++I + QL VLLHR S+N+ EL R P+
Sbjct 13 LRSW-------IRSSPGTHLWLLIIALTSVIVV-IAPDQLDHVLLHRNSSNLHELTRHPI 64
Query 69 EVLFSSLLWIDGR-NLEPYLLLFTLFLAPAEHWLGHLRWLTVGLTAHIGATYLSEGLLYL 127
L SS WI+ +L Y +LF F AP E WLG LRW + TAHI AT +S+ ++
Sbjct 65 RSLISSAFWIENPASLALYAVLFEFFHAPVERWLGTLRWFVIVATAHITATLVSQRVVLS 124
Query 128 AIQHRDASERMVHARDIGVSYFLVGVMAVLTYHIAKPWRWGYLGVLLVIFGFPLIAMDKA 187
AI+ A MVH DIGVSY L + VLTY + PWRW YL ++ FG PL+
Sbjct 125 AIRDHRAPRSMVHVVDIGVSYGLAAAIGVLTYRLPHPWRWFYLAGVVAFFGIPLL----T 180
Query 188 ELDFTAVGHFASILIGLLFYPMARE 212
+FT +GH ++ +GLL +P+ R
Sbjct 181 GANFTDLGHAIALAVGLLAWPLTRH 205
>gi|302535644|ref|ZP_07287986.1| conserved hypothetical protein [Streptomyces sp. C]
gi|302444539|gb|EFL16355.1| conserved hypothetical protein [Streptomyces sp. C]
Length=217
Score = 140 bits (352), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 86/208 (42%), Positives = 122/208 (59%), Gaps = 14/208 (6%)
Query 10 LRSWALAVWHFVSNAPLTYAWLVVLVITTIIQNNLTGSQLHFVLLHR-STNIAELGRDPL 68
LRSW + ++P T+ WL+++ +T+++ ++ +L VLLHR S+NI +L + P+
Sbjct 13 LRSW-------IRSSPGTHIWLLIVAVTSLVVA-ISPDRLDHVLLHRNSSNIHQLVKYPV 64
Query 69 EVLFSSLLWIDGR-NLEPYLLLFTLFLAPAEHWLGHLRWLTVGLTAHIGATYLSEGLLYL 127
L SS WI+ +L Y +LF LF AP E WLG LRWL + TAH+ AT LS+ +L +
Sbjct 65 RALLSSAFWIENPASLALYAVLFELFHAPVERWLGTLRWLLIVATAHVVATLLSQKVLLM 124
Query 128 AIQHRDASERMVHARDIGVSYFLVGVMAVLTYHIAKPWRWGYLGVLLVIFGFPLIAMDKA 187
AIQ A M H DIGVSY L + VLTY + PWRW YL ++ FG PL+
Sbjct 125 AIQDNRAPHSMTHVVDIGVSYGLAASIGVLTYRLPNPWRWFYLLGVVAFFGLPLLTGGT- 183
Query 188 ELDFTAVGHFASILIGLLFYPMARERDG 215
FT +GH S+ +GLL +P+ G
Sbjct 184 ---FTDLGHATSLAVGLLAWPLTLHPHG 208
>gi|294630034|ref|ZP_06708594.1| conserved hypothetical protein [Streptomyces sp. e14]
gi|292833367|gb|EFF91716.1| conserved hypothetical protein [Streptomyces sp. e14]
Length=231
Score = 139 bits (350), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 81/200 (41%), Positives = 112/200 (56%), Gaps = 4/200 (2%)
Query 10 LRSWALAVWHFVSNAPLTYAWLVVLVITTIIQNNLTGSQLHFVLLHRSTNIAELGRDPLE 69
+RS AV +V +AP TY WL +L +TT+ + ++ L RSTN+ EL P+
Sbjct 1 MRSVPRAVAGYVRSAPGTYVWLAILFVTTVALHRMSPHFETEFLRQRSTNLHELSEHPVR 60
Query 70 VLFSSLLWIDGRNLEPYLLLFTLFLAPAEHWLGHLRWLTVGLTAHIGATYLSEGLLYLAI 129
VL +S +W G PY L+T+F A AE LG RWL V AH+ AT +SEG L I
Sbjct 61 VLVASAMWTAGGRWLPYAALYTVFHAQAERRLGTPRWLAVCAAAHVLATLISEGALLWGI 120
Query 130 QHRDASERMVHARDIGVSYFLVGVMAVLTYHIAKPWRWGYLGVLLVIFGFPLIAMDKAEL 189
+ + V+ D+GVSY L GV+ VLT+ + +PWR+GY +L F PL
Sbjct 121 RRGVVPDSAVNTLDVGVSYALAGVVGVLTWCVPRPWRYGYAAAVLGFFAVPL----ATGR 176
Query 190 DFTAVGHFASILIGLLFYPM 209
FT +GHF ++LIGL P+
Sbjct 177 TFTDLGHFTAVLIGLACRPL 196
>gi|256391043|ref|YP_003112607.1| hypothetical protein Caci_1845 [Catenulispora acidiphila DSM
44928]
gi|256357269|gb|ACU70766.1| conserved hypothetical protein [Catenulispora acidiphila DSM
44928]
Length=200
Score = 132 bits (332), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 83/196 (43%), Positives = 112/196 (58%), Gaps = 7/196 (3%)
Query 17 VWHFVSNAPLTYAWLVVLVITTIIQNNLTGSQLHFVLLHRSTNIAELGRDPLEVLFSSLL 76
VW +V +AP TY WLV L + L + +L STN+A L + PL+V+ +SL
Sbjct 9 VWDYVRDAPGTYLWLVALFGVSRYVRRLPAERATKLLEANSTNLARLRQAPLKVMVTSLF 68
Query 77 WIDGRNLEPYLLLFTLFLAPAEHWLGHLRWLTVGLTAHIGATYLSEGLLYLAIQ--HRDA 134
+ G + Y + +++F APAEHWLG RWL V AH+GAT LSEG + I+
Sbjct 69 FTTGTSWLFYAVTYSVFHAPAEHWLGTWRWLVVLGLAHVGATLLSEGWVAREIRAGRLPR 128
Query 135 SERMVHARDIGVSYFLVGVMAVLTYHIAKPWRWGYLGVLLVIFGFPLIAMDKAELDFTAV 194
SERM A D GVSY G AVLTY I +PWR YL L+ +G+ + K DFTA+
Sbjct 129 SERM--AADYGVSYAQAGAAAVLTYRIPEPWRLLYLAALIAFYGYGWV---KNRRDFTAI 183
Query 195 GHFASILIGLLFYPMA 210
GH ++ IGL + +A
Sbjct 184 GHVCAVAIGLACFWIA 199
>gi|328883779|emb|CCA57018.1| hypothetical protein SVEN_3732 [Streptomyces venezuelae ATCC
10712]
Length=224
Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 81/206 (40%), Positives = 114/206 (56%), Gaps = 14/206 (6%)
Query 10 LRSWALAVWHFVSNAPLTYAWLVVLVITTIIQNNLTGSQLHFVLLHR-STNIAELGRDPL 68
+RSW V ++P T+ WL V+ IT+++ L+ L LLHR S+N+ +L PL
Sbjct 20 IRSW-------VRSSPGTHVWLAVIAITSLVIA-LSPQGLETYLLHRNSSNLHQLSHHPL 71
Query 69 EVLFSSLLWI-DGRNLEPYLLLFTLFLAPAEHWLGHLRWLTVGLTAHIGATYLSEGLLYL 127
L S WI D +L Y LF L AP E WLG +WL V TAH+ AT +S+ ++ +
Sbjct 72 RALLGSAFWIEDPADLLLYAALFELIHAPVERWLGTAKWLFVVATAHVAATLISQQVVLV 131
Query 128 AIQHRDASERMVHARDIGVSYFLVGVMAVLTYHIAKPWRWGYLGVLLVIFGFPLIAMDKA 187
AI+ D M H DIGVSY L +LTY + +PWRW YL ++ F PL+
Sbjct 132 AIRLHDVPRSMAHVVDIGVSYGLAASAGILTYRLPRPWRWLYLAAVVAFFVVPLL----T 187
Query 188 ELDFTAVGHFASILIGLLFYPMARER 213
+ +T +GH S+ IGL YP+ R +
Sbjct 188 DRTYTDLGHAISLAIGLACYPLTRGK 213
>gi|108798170|ref|YP_638367.1| hypothetical protein Mmcs_1199 [Mycobacterium sp. MCS]
gi|119867266|ref|YP_937218.1| hypothetical protein Mkms_1216 [Mycobacterium sp. KMS]
gi|108768589|gb|ABG07311.1| putative conserved transmembrane protein [Mycobacterium sp. MCS]
gi|119693355|gb|ABL90428.1| putative conserved transmembrane protein [Mycobacterium sp. KMS]
Length=213
Score = 130 bits (327), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 74/199 (38%), Positives = 111/199 (56%), Gaps = 7/199 (3%)
Query 17 VWHFVSNAPLTYAWLVVLVITTIIQNNLTGSQLHFVLLHRSTNIAELGRDPLEVLFSSLL 76
V +++ AP T+ WL VL +TT +Q + G + +L +STN++ L +P VL +SL
Sbjct 8 VGRYLAGAPATFMWLAVLAVTTRVQRH-AGRERSQLLRSQSTNLSHLSEEPTRVLAASLF 66
Query 77 WIDGRNLEPYLLLFTLFLAPAEHWLGHLRWLTVGLTAHIGATYLSEGLLYLAIQHRDASE 136
W+DG+ PY+ F LAPAE LG RWL VG AH+ TYL +G L +I+ + A
Sbjct 67 WLDGKRWWPYVPPFAAVLAPAERRLGTFRWLVVGAAAHVAGTYLGQGYLRWSIRAQQAPP 126
Query 137 RMVHARDIGVSYFLVGVMAVLTYHIAKPWRWGYLGVLLVIFGFPLIAMDK-AELDFTAVG 195
R+ A D+GVSYFL+GV L+ ++ + G ++A + FT VG
Sbjct 127 RLADAHDVGVSYFLLGVAGTLSAYLPR-----RHRSAARAAGVAVLAANAIIRPTFTEVG 181
Query 196 HFASILIGLLFYPMARERD 214
H ++ + GL+ P+A RD
Sbjct 182 HLSAFVTGLVLSPLAIGRD 200
>gi|126433828|ref|YP_001069519.1| hypothetical protein Mjls_1226 [Mycobacterium sp. JLS]
gi|126233628|gb|ABN97028.1| putative conserved transmembrane protein [Mycobacterium sp. JLS]
Length=213
Score = 128 bits (321), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 74/199 (38%), Positives = 109/199 (55%), Gaps = 7/199 (3%)
Query 17 VWHFVSNAPLTYAWLVVLVITTIIQNNLTGSQLHFVLLHRSTNIAELGRDPLEVLFSSLL 76
V +++ AP T+ WL VL +TT +Q + G + +L +STN++ L +P VL +SL
Sbjct 8 VGRYLAGAPATFMWLAVLAVTTRVQRH-AGRERSQLLRSQSTNLSHLSEEPTRVLAASLF 66
Query 77 WIDGRNLEPYLLLFTLFLAPAEHWLGHLRWLTVGLTAHIGATYLSEGLLYLAIQHRDASE 136
W+DG+ PY+ F LAPAE LG RWL VG AH+ TYL +G L +I+ A
Sbjct 67 WLDGKRWWPYVPPFAAVLAPAERRLGTFRWLVVGAAAHVTGTYLGQGYLRWSIRAEQAPP 126
Query 137 RMVHARDIGVSYFLVGVMAVLTYHIAKPWRWGYLGVLLVIFGFPLIAMDK-AELDFTAVG 195
R+ A D+GVSYFL+GV L+ ++ + G ++A + FT VG
Sbjct 127 RLADAHDVGVSYFLLGVAGTLSAYLPR-----RHRSAARAAGVAVLATNAIIRPTFTEVG 181
Query 196 HFASILIGLLFYPMARERD 214
H ++ + GL P+A RD
Sbjct 182 HLSAFVTGLALSPLAIGRD 200
>gi|254552537|ref|ZP_05142984.1| hypothetical protein Mtube_19165 [Mycobacterium tuberculosis
'98-R604 INH-RIF-EM']
Length=49
Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 47/49 (96%), Positives = 49/49 (100%), Gaps = 0/49 (0%)
Query 189 LDFTAVGHFASILIGLLFYPMARERDGRLWNPARIKSLLHRRGTRGRRA 237
+DF+AVGHFASILIGLLFYPMARERDGRLWNPARIKSLLHRRGTRGRRA
Sbjct 1 MDFSAVGHFASILIGLLFYPMARERDGRLWNPARIKSLLHRRGTRGRRA 49
>gi|297157288|gb|ADI07000.1| hypothetical protein SBI_03879 [Streptomyces bingchenggensis
BCW-1]
Length=209
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/191 (29%), Positives = 87/191 (46%), Gaps = 3/191 (1%)
Query 22 SNAPLTYAWLVVLVITTIIQNNLTGSQLHFVLLHRSTNIAELGRDPLEVLFSSLLWIDGR 81
+ P T + VVLV+T + +H VL H ST++ L P+ VLF+S +W+ G
Sbjct 5 ARTPFTLGYAVVLVVTGLFSRLADPDLVHDVLTHSSTDVVNLSDRPVLVLFASAVWVAGG 64
Query 82 NLEPYLLLFTLFLAPAEHWLGHLRWLTVGLTAHIGATYLSEGLLYLAIQHRDASERMVHA 141
L PY+L F L + E LG R V L H+ AT ++E + ++ + +
Sbjct 65 VLTPYILAFLLVVGALERRLGGWRTAGVFLLGHVLATLMTELPVAASVAAGQLPDSSLRR 124
Query 142 RDIGVSYFLVGVMAVLTYHIAKPWRWGYLGVLLVIFGFPLIAMDKAELDFTAVGHFASIL 201
D G+SY L+ L + RW LG + ++ L+ T GH ++
Sbjct 125 LDYGISYGLLACTGALAGLLWPRLRWTLLGGITLVLVLDLVEFTDP---LTDCGHLLALT 181
Query 202 IGLLFYPMARE 212
G+L +P R
Sbjct 182 TGVLCWPYIRR 192
>gi|256394367|ref|YP_003115931.1| hypothetical protein Caci_5231 [Catenulispora acidiphila DSM
44928]
gi|256360593|gb|ACU74090.1| hypothetical protein Caci_5231 [Catenulispora acidiphila DSM
44928]
Length=272
Score = 75.9 bits (185), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 68/215 (32%), Positives = 104/215 (49%), Gaps = 18/215 (8%)
Query 9 RLRSWAL----AVWHFVSN----APLTYAWLVVLVITTIIQNNLTGSQLHFVLLHRSTNI 60
R SWA VW+++ AP T A +++ + + L+ + VLL ST +
Sbjct 22 RTNSWASRHVRVVWNWLKAWARLAPFTTALSLLIAVHAWMLLGLSPRLRNAVLLTHSTTL 81
Query 61 AELGRDPLEVLFSSLLWIDGRNLEPYLLLFTLFLAPAEHWLGHLRWLTVGLTAHIGAT-- 118
A L ++PL VLF S +W D L L L+LAP E W+G R + L HIGAT
Sbjct 82 AHLKQEPLTVLFGSAMWTDVNELLFMALTAFLYLAPLERWIGTWRTVLAFLAGHIGATLL 141
Query 119 ---YLSEGLLYLAIQHRDASERMVHARDIGVSYFLVGVMAVLTYHIAKPWRWGYLGVLLV 175
++ E ++ Q R S + D+G+SY A+L Y + P+R+ ++L
Sbjct 142 IALWIEETVVLTPEQDRVYSRTI----DVGISYGAYACAALLAYRLRWPYRFSVWSLMLA 197
Query 176 IFGFPLIAMD-KAELDFTAVGHFASILIGLLFYPM 209
+ D A +D+T +GH A+ IGL YP+
Sbjct 198 YLLYQASLKDFDAAVDYTPLGHLAAFGIGLALYPL 232
>gi|294631361|ref|ZP_06709921.1| conserved hypothetical protein [Streptomyces sp. e14]
gi|292834694|gb|EFF93043.1| conserved hypothetical protein [Streptomyces sp. e14]
Length=225
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/193 (31%), Positives = 89/193 (47%), Gaps = 5/193 (2%)
Query 25 PLTYAWLVVLVITTIIQNNLTGSQLHFVLLHRSTNIAELGRDPLEVLFSSLLWIDGRNLE 84
P T+A+ +L++T+ + + + V ST++A L R PL VL S LWI G
Sbjct 33 PFTFAYGTLLLVTSAVARYAGPAVMDAVYRGSSTDVAHLVRTPLPVLAGSALWIAGGIAS 92
Query 85 PYLLLFTLFLAPAEHWLGHLRWLTVGLTAHIGATYLSEGLLYLAIQHRDASERMVHARDI 144
PY L F L L E G LR V L H+ AT +E + LA+ + +H D
Sbjct 93 PYSLCFLLVLTGLERRTGTLRAACVFLYGHVLATLATEVPVGLAVLAGRLPDSSLHRLDY 152
Query 145 GVSYFLVGVMAVLTYHIAKPW-RWGYLGVLLVIFGFPLIAMDKAELDFTAVGHFASILIG 203
G+S+ + + L + +PW RW VL V G L + T+ GH ++ +G
Sbjct 153 GISFGVAASLGALA-GLLRPWARW---SVLAVFVGAALSDLLTLADPMTSAGHLIAVTLG 208
Query 204 LLFYPMARERDGR 216
+ +P R R
Sbjct 209 VAAWPAVRRGSAR 221
>gi|29829510|ref|NP_824144.1| hypothetical protein SAV_2968 [Streptomyces avermitilis MA-4680]
gi|29606618|dbj|BAC70679.1| hypothetical protein [Streptomyces avermitilis MA-4680]
Length=316
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/205 (32%), Positives = 94/205 (46%), Gaps = 12/205 (5%)
Query 23 NAPLTYAWLVVLVITTIIQNNLTGSQLHFVLLHRSTNIAELGRDPLEVLFSSLLWIDGRN 82
P T A+ +VLV T+++ S +H + ST++A L RDPL VL +S LW+ G
Sbjct 111 GTPFTLAYALVLVATSLVAEYADPSFVHVLHQASSTDVAHLMRDPLLVLVASALWVAGGV 170
Query 83 LEPYLLLFTLFLAPAEHWLGHLRWLTVGLTAHIGATYLSEGLLYLAIQHRDASERMVHAR 142
PY L F L L E G R V L H+ AT +E + A+ +H
Sbjct 171 TSPYALGFLLVLTALERRTGGRRTAGVFLLGHVLATLATEVPVGFAVLAGHLPGSSLHRL 230
Query 143 DIGVSYFLVGVMAVLTYHIAKPWRWGYLGVLLVIFGFPLIAMDKAEL--DFTAVGHFASI 200
D G+S+ + + L + PW +LV+FG L+A D E T GH ++
Sbjct 231 DYGISFGVAACVGALA-GLLTPWP---RCTILVVFGGSLVA-DLVEFADPMTDWGHLMAL 285
Query 201 LIGLLFYPMARERDGRLWNPARIKS 225
IG+ +P+ R W AR S
Sbjct 286 SIGVGMWPVVRR-----WQRARTSS 305
>gi|311898336|dbj|BAJ30744.1| hypothetical protein KSE_49660 [Kitasatospora setae KM-6054]
Length=263
Score = 66.2 bits (160), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/185 (31%), Positives = 88/185 (48%), Gaps = 16/185 (8%)
Query 42 NNLTGSQLHFVLLHRSTNIAELGRDPLEVLFSSLLWIDGRNLEPYLLLFTLFLAPAEHWL 101
+L+ + H +L+H P L S LW+ G PY F L +AP E +
Sbjct 83 QSLSSTDAHNLLVH-----------PALSLVGSGLWVAGPVWMPYFWAFALTVAPLERRI 131
Query 102 GHLRWLTVGLTAHIGATYLSEGLLYLAIQHRDASERMVHARDIGVSYFLVGVMAVLTYHI 161
G LR L V H+ AT LS+G++ A+ A+ ++ A DIGVSY ++ + L +
Sbjct 132 GGLRALAVFGAGHVAATLLSQGVVITAVAAGGAAPDLLDAMDIGVSYGVLTSLGALAGLL 191
Query 162 AKPWRWGYLGVLLVIFGFPLIAMDKAELDF-TAVGHFASILIGLLFYPMARERDGRLWNP 220
R LG L + ++ ++ D T VGH A++ +G+ +P+ R R R
Sbjct 192 GPTGRKVALGAGLALIAHQVV----SDPDLVTGVGHPAALAVGVALWPVLRGRGPRRGLG 247
Query 221 ARIKS 225
ARI S
Sbjct 248 ARIAS 252
>gi|342859957|ref|ZP_08716609.1| hypothetical protein MCOL_13795 [Mycobacterium colombiense CECT
3035]
gi|342132335|gb|EGT85564.1| hypothetical protein MCOL_13795 [Mycobacterium colombiense CECT
3035]
Length=276
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/169 (35%), Positives = 75/169 (45%), Gaps = 17/169 (10%)
Query 57 STNIAELGRDPLEVLFSSLLWIDGRNLEPYLLLFTLFLAPAEHWLGHLRWLTVGL----- 111
STN+ LGR L L S DG +L +L LA LG L W GL
Sbjct 60 STNVHNLGRGHLGTLIGSAFVNDGGDLFFWLPGLVCLLA-----LGELMWCGRGLLVTFA 114
Query 112 TAHIGATYLSEGLLYLAIQHRDASERMVHARDIGVSYFLVGVMAVLTYHIAKPWRWGYLG 171
HIGAT + L AI+ + A D+G+SY V V+ T I WR + G
Sbjct 115 VGHIGATLIVAVGLVAAIEAGTLPVSVARASDVGISYGAVCVLGAFTAAIPARWRGAWAG 174
Query 172 VLLVIFGFPLIAMDKAELDFTAVGHFASILIGLLFYPMARERDGRLWNP 220
L G ++A A DFTAVGH ++L+G+ AR R W P
Sbjct 175 WWL---GTAVVAASSA--DFTAVGHVVALLLGIGLS--ARMRPAASWTP 216
>gi|296139556|ref|YP_003646799.1| hypothetical protein Tpau_1844 [Tsukamurella paurometabola DSM
20162]
gi|296027690|gb|ADG78460.1| hypothetical protein Tpau_1844 [Tsukamurella paurometabola DSM
20162]
Length=260
Score = 65.1 bits (157), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 60/193 (32%), Positives = 90/193 (47%), Gaps = 22/193 (11%)
Query 27 TYAWLVVLVITTIIQNNLTGSQLHFVLLHRSTNIAELGRDPLEVLFSSLLWIDGRNLEPY 86
T WL+V V +I+ L S VLL STN+ + + P++ L +S LWI+ ++
Sbjct 48 TLIWLIVCV-NSIMLIGLPPSLQTQVLLAHSTNLTQFAQHPVQSLITSALWIEPVDIVFA 106
Query 87 LLLFTLFLAPAEHWLGHLRWLTVGLTAHIGAT---YLSEGLLYL---AIQHRDASERMVH 140
++ L L PAE WLGHL + V T A+ LS G L D S +
Sbjct 107 TMVTVLVLGPAERWLGHLGLIAVYFTGSAAASLVAVLSAGRLVAHGWLTDDVDVSGMI-- 164
Query 141 ARDIGVSYFLVGVMAVLTYHIAKPWRWGYLGVLL----VIFGFPLIAMDKAELDFTAVGH 196
D+GVSY + V +L Y I + RW L +L V P + + +GH
Sbjct 165 --DVGVSYGSLCVAGLLVYRIQR-LRWRVLAMLTLPVAVQLTLPFFGL------YATLGH 215
Query 197 FASILIGLLFYPM 209
++L+G L +P+
Sbjct 216 LRAVLLGYLLWPV 228
>gi|116511958|ref|YP_809174.1| hypothetical protein LACR_1221 [Lactococcus lactis subsp. cremoris
SK11]
gi|116107612|gb|ABJ72752.1| hypothetical protein LACR_1221 [Lactococcus lactis subsp. cremoris
SK11]
Length=258
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/202 (26%), Positives = 94/202 (47%), Gaps = 6/202 (2%)
Query 6 VVARLRSWALAVWHFVSNAPLTYAWLVVLVITTIIQNNLTGSQLHFVLLHRSTNIAELGR 65
+V++L + L + ++ +AP T+ + + T++Q ++ + H ST+IA +
Sbjct 30 IVSKLSPYTLFLSKWLQSAPATFTYTAIFCDFTLVQGTTPQHLINILTNHASTSIARVSD 89
Query 66 DPLEVLFSSLLWI--DGRNLEPYLLLFTLFLAPAEHWLGHLRWLTVGLTAHIGATYLSEG 123
P+ V F S W+ +G L Y+ +F +A AE G R + + L+ HI A+ +
Sbjct 90 RPISVFFDSAFWVADNGAGLIIYVAIFWTIIAWAERKYGSPRIIVITLSGHILASIATIF 149
Query 124 LLYLAIQHRDASERMVHARDIGVSYFLVGVMAVLTYHIAKPWRWGYLGVLLVIFGFPLIA 183
+ AI A + A D+GVSY +V A + K W + + ++ G ++
Sbjct 150 IELWAINSGHAPSSLAKATDVGVSYIMVAGCAAAIL-LMKKW---FFTISIIALGLFILL 205
Query 184 MDKAELDFTAVGHFASILIGLL 205
E +GH + LIG +
Sbjct 206 PVLFEHSIWDMGHLFATLIGFI 227
>gi|254380906|ref|ZP_04996272.1| hypothetical protein SSAG_00574 [Streptomyces sp. Mg1]
gi|194339817|gb|EDX20783.1| hypothetical protein SSAG_00574 [Streptomyces sp. Mg1]
Length=311
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 70/226 (31%), Positives = 110/226 (49%), Gaps = 19/226 (8%)
Query 16 AVWHFVSNAPLTYAWLVVLVITTI-IQNNLTGSQLHFVLLHRSTNIAELGRDPLEVLFSS 74
AV + +PLT A++ +L+++ + + L+ + VL H STN+ L PL L S
Sbjct 61 AVRDYPRRSPLTLAYVCLLLVSHAWVGHGLSADRAADVLGHLSTNLDNLHDHPLSALLGS 120
Query 75 LLWIDGR-----NLEPYLLLFTL------FLAPAEHWLGHLRWLTVGLTAHIGATYLSEG 123
+L+ DG ++E L TL FLA AE G R + V L H+ AT L+
Sbjct 121 MLFFDGTLTDVTSVEFVGTLITLGLGVCCFLAWAERRWGKRRAVAVFLGGHVVATLLTAV 180
Query 124 LLYLAIQHRDASERMVHARDIGVSYFLVGVMAVLTYHIAKPWRWGYLGVLLVIFGFPL-- 181
++ +A++H + HA D GVSY V+A+ T +A P R G L + + +PL
Sbjct 181 VITVALRHGWYPAAVRHALDYGVSYGAQTVLALGT--LALP-RRGRLPWAVFVLAWPLGG 237
Query 182 IAMDKAELDFTAVGHFASILI--GLLFYPMARERDGRLWNPARIKS 225
+ + DF +GH + ++ GLL P R + R P+ S
Sbjct 238 VEWNGPLPDFITIGHLVAAVLGFGLLGVPAFRRQRVRATGPSSAAS 283
>gi|281491615|ref|YP_003353595.1| hypothetical protein LLKF_1145 [Lactococcus lactis subsp. lactis
KF147]
gi|281375333|gb|ADA64846.1| Hypothetical protein LLKF_1145 [Lactococcus lactis subsp. lactis
KF147]
Length=258
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/143 (31%), Positives = 69/143 (49%), Gaps = 6/143 (4%)
Query 19 HFVS----NAPLTYAWLVVLVITTIIQNNLTGSQLHFVLLHRSTNIAELGRDPLEVLFSS 74
HF+S +AP T+ + + T++Q ++ + H ST+IA + P+ F S
Sbjct 39 HFLSKWLQSAPATFTYTAIFCAFTLVQRTAPQHLINILTNHSSTSIARVSDKPISTFFDS 98
Query 75 LLWI--DGRNLEPYLLLFTLFLAPAEHWLGHLRWLTVGLTAHIGATYLSEGLLYLAIQHR 132
W+ +G L Y++LF +A AE G R + + L+ HI A+ + L AI
Sbjct 99 AFWVADNGAGLLIYVVLFWTVIAWAERKYGSPRMIVITLSGHILASLTTIFLELWAINSG 158
Query 133 DASERMVHARDIGVSYFLVGVMA 155
A + A D+GVSY LV A
Sbjct 159 RAPSSLAMATDVGVSYILVAGCA 181
>gi|15673101|ref|NP_267275.1| hypothetical protein L132621 [Lactococcus lactis subsp. lactis
Il1403]
gi|12724079|gb|AAK05217.1|AE006344_6 hypothetical protein L132621 [Lactococcus lactis subsp. lactis
Il1403]
Length=258
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/143 (31%), Positives = 69/143 (49%), Gaps = 6/143 (4%)
Query 19 HFVS----NAPLTYAWLVVLVITTIIQNNLTGSQLHFVLLHRSTNIAELGRDPLEVLFSS 74
HF+S +AP T+ + + T++Q ++ + H ST+IA + P+ F S
Sbjct 39 HFLSKWLQSAPATFTYTAIFCAFTLVQRTAPQHLINILTNHSSTSIARVSDKPISTFFDS 98
Query 75 LLWI--DGRNLEPYLLLFTLFLAPAEHWLGHLRWLTVGLTAHIGATYLSEGLLYLAIQHR 132
W+ +G L Y++LF +A AE G R + + L+ HI A+ + L AI
Sbjct 99 AFWVADNGAGLLIYVVLFWTVIAWAERKYGSPRMIVITLSGHILASLTTIFLELWAINSG 158
Query 133 DASERMVHARDIGVSYFLVGVMA 155
A + A D+GVSY LV A
Sbjct 159 RAPSSLAMATDVGVSYILVAGCA 181
Lambda K H
0.329 0.142 0.457
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 322714888716
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40