BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv3435c
Length=284
Score E
Sequences producing significant alignments: (Bits) Value
gi|289555707|ref|ZP_06444917.1| conserved membrane protein [Myco... 561 3e-158
gi|15610571|ref|NP_217952.1| transmembrane protein [Mycobacteriu... 560 6e-158
gi|148824645|ref|YP_001289399.1| transmembrane protein [Mycobact... 559 2e-157
gi|15843030|ref|NP_338067.1| hypothetical protein MT3541 [Mycoba... 557 5e-157
gi|340628406|ref|YP_004746858.1| hypothetical protein MCAN_34521... 557 6e-157
gi|339296259|gb|AEJ48370.1| conserved membrane protein [Mycobact... 538 3e-151
gi|254234031|ref|ZP_04927356.1| hypothetical protein TBCG_03374 ... 407 1e-111
gi|183981135|ref|YP_001849426.1| hypothetical protein MMAR_1115 ... 340 2e-91
gi|296168761|ref|ZP_06850452.1| conserved hypothetical protein [... 300 1e-79
gi|342861891|ref|ZP_08718536.1| hypothetical protein MCOL_23495 ... 272 4e-71
gi|254776806|ref|ZP_05218322.1| hypothetical protein MaviaA2_193... 271 1e-70
gi|118464448|ref|YP_883511.1| hypothetical protein MAV_4376 [Myc... 270 1e-70
gi|41410352|ref|NP_963188.1| hypothetical protein MAP4254 [Mycob... 270 1e-70
gi|296168760|ref|ZP_06850451.1| conserved hypothetical protein [... 270 2e-70
gi|254818862|ref|ZP_05223863.1| hypothetical protein MintA_02999... 264 1e-68
gi|343924936|ref|ZP_08764472.1| hypothetical protein GOALK_029_0... 179 4e-43
gi|169628549|ref|YP_001702198.1| hypothetical protein MAB_1458 [... 159 7e-37
gi|118466993|ref|YP_883592.1| hypothetical protein MAV_4457 [Myc... 158 7e-37
gi|240167717|ref|ZP_04746376.1| transmembrane protein [Mycobacte... 158 8e-37
gi|254776893|ref|ZP_05218409.1| hypothetical protein MaviaA2_198... 157 2e-36
gi|41410273|ref|NP_963109.1| hypothetical protein MAP4175 [Mycob... 156 3e-36
gi|145222595|ref|YP_001133273.1| hypothetical protein Mflv_2007 ... 156 3e-36
gi|240167716|ref|ZP_04746375.1| hypothetical protein MkanA1_0027... 155 5e-36
gi|296168569|ref|ZP_06850373.1| transmembrane protein [Mycobacte... 154 2e-35
gi|342861802|ref|ZP_08718447.1| hypothetical protein MCOL_23050 ... 152 6e-35
gi|342861806|ref|ZP_08718451.1| hypothetical protein MCOL_23070 ... 152 6e-35
gi|308396517|ref|ZP_07492333.2| conserved membrane protein [Myco... 152 6e-35
gi|340625734|ref|YP_004744186.1| hypothetical protein MCAN_07181... 152 7e-35
gi|183981066|ref|YP_001849357.1| transmembrane protein [Mycobact... 152 7e-35
gi|118462593|ref|YP_883594.1| hypothetical protein MAV_4459 [Myc... 152 7e-35
gi|298524204|ref|ZP_07011613.1| conserved transmembrane protein ... 152 7e-35
gi|254776895|ref|ZP_05218411.1| hypothetical protein MaviaA2_198... 152 7e-35
gi|15607853|ref|NP_215227.1| transmembrane protein [Mycobacteriu... 152 8e-35
gi|306806537|ref|ZP_07443205.1| conserved membrane protein [Myco... 151 9e-35
gi|118616582|ref|YP_904914.1| transmembrane protein [Mycobacteri... 151 1e-34
gi|342861804|ref|ZP_08718449.1| hypothetical protein MCOL_23060 ... 149 4e-34
gi|336460656|gb|EGO39547.1| hypothetical protein MAPs_38580 [Myc... 149 5e-34
gi|312140169|ref|YP_004007505.1| integral membrane protein [Rhod... 145 5e-33
gi|41410271|ref|NP_963107.1| hypothetical protein MAP4173 [Mycob... 145 6e-33
gi|315444698|ref|YP_004077577.1| hypothetical protein Mspyr1_312... 142 4e-32
gi|145224366|ref|YP_001135044.1| hypothetical protein Mflv_3784 ... 137 1e-30
gi|111017104|ref|YP_700076.1| hypothetical protein RHA1_ro00082 ... 132 5e-29
gi|226359618|ref|YP_002777396.1| hypothetical protein ROP_02040 ... 127 2e-27
gi|323359228|ref|YP_004225624.1| hypothetical protein MTES_2780 ... 111 1e-22
gi|217977911|ref|YP_002362058.1| hypothetical protein Msil_1750 ... 94.4 2e-17
gi|217976399|ref|YP_002360546.1| hypothetical protein Msil_0203 ... 73.9 3e-11
gi|258652429|ref|YP_003201585.1| hypothetical protein Namu_2219 ... 65.9 7e-09
gi|256394869|ref|YP_003116433.1| hypothetical protein Caci_5734 ... 64.7 2e-08
gi|108743475|dbj|BAE95578.1| hypothetical protein [Streptomyces ... 58.9 9e-07
gi|328771431|gb|EGF81471.1| hypothetical protein BATDEDRAFT_8772... 57.4 2e-06
>gi|289555707|ref|ZP_06444917.1| conserved membrane protein [Mycobacterium tuberculosis KZN 605]
gi|289440339|gb|EFD22832.1| conserved membrane protein [Mycobacterium tuberculosis KZN 605]
Length=305
Score = 561 bits (1447), Expect = 3e-158, Method: Compositional matrix adjust.
Identities = 284/284 (100%), Positives = 284/284 (100%), Gaps = 0/284 (0%)
Query 1 LGRILRVVVGLVLVIAAYVTVIALYHSTGLGRPHEVAHGRPTADGTTVTLHVEQLQTIKG 60
LGRILRVVVGLVLVIAAYVTVIALYHSTGLGRPHEVAHGRPTADGTTVTLHVEQLQTIKG
Sbjct 22 LGRILRVVVGLVLVIAAYVTVIALYHSTGLGRPHEVAHGRPTADGTTVTLHVEQLQTIKG 81
Query 61 VLVANLAVSPGTELLDSQTQGLKDDLTVTVTSVVTPTKRTWSSGSLPGVFPVPLTISGDP 120
VLVANLAVSPGTELLDSQTQGLKDDLTVTVTSVVTPTKRTWSSGSLPGVFPVPLTISGDP
Sbjct 82 VLVANLAVSPGTELLDSQTQGLKDDLTVTVTSVVTPTKRTWSSGSLPGVFPVPLTISGDP 141
Query 121 ANWPFDHYRSGPITVQLYRGAAHAPERVSVTFVDRLPGWNVDISGVGDANVPAPYRVGLH 180
ANWPFDHYRSGPITVQLYRGAAHAPERVSVTFVDRLPGWNVDISGVGDANVPAPYRVGLH
Sbjct 142 ANWPFDHYRSGPITVQLYRGAAHAPERVSVTFVDRLPGWNVDISGVGDANVPAPYRVGLH 201
Query 181 RSPSSVAFGTVIVGVLIALAGVGLFVAVQTARGRRQFQPPMTTWYAAMLFAVIPLRNALP 240
RSPSSVAFGTVIVGVLIALAGVGLFVAVQTARGRRQFQPPMTTWYAAMLFAVIPLRNALP
Sbjct 202 RSPSSVAFGTVIVGVLIALAGVGLFVAVQTARGRRQFQPPMTTWYAAMLFAVIPLRNALP 261
Query 241 DAPPIGFWIDVTVVLWVVVALVTSMVLYILCWWWHLKPDVDETM 284
DAPPIGFWIDVTVVLWVVVALVTSMVLYILCWWWHLKPDVDETM
Sbjct 262 DAPPIGFWIDVTVVLWVVVALVTSMVLYILCWWWHLKPDVDETM 305
>gi|15610571|ref|NP_217952.1| transmembrane protein [Mycobacterium tuberculosis H37Rv]
gi|31794612|ref|NP_857105.1| transmembrane protein [Mycobacterium bovis AF2122/97]
gi|121639356|ref|YP_979580.1| putative transmembrane protein [Mycobacterium bovis BCG str.
Pasteur 1173P2]
28 more sequence titles
Length=284
Score = 560 bits (1444), Expect = 6e-158, Method: Compositional matrix adjust.
Identities = 283/284 (99%), Positives = 284/284 (100%), Gaps = 0/284 (0%)
Query 1 LGRILRVVVGLVLVIAAYVTVIALYHSTGLGRPHEVAHGRPTADGTTVTLHVEQLQTIKG 60
+GRILRVVVGLVLVIAAYVTVIALYHSTGLGRPHEVAHGRPTADGTTVTLHVEQLQTIKG
Sbjct 1 MGRILRVVVGLVLVIAAYVTVIALYHSTGLGRPHEVAHGRPTADGTTVTLHVEQLQTIKG 60
Query 61 VLVANLAVSPGTELLDSQTQGLKDDLTVTVTSVVTPTKRTWSSGSLPGVFPVPLTISGDP 120
VLVANLAVSPGTELLDSQTQGLKDDLTVTVTSVVTPTKRTWSSGSLPGVFPVPLTISGDP
Sbjct 61 VLVANLAVSPGTELLDSQTQGLKDDLTVTVTSVVTPTKRTWSSGSLPGVFPVPLTISGDP 120
Query 121 ANWPFDHYRSGPITVQLYRGAAHAPERVSVTFVDRLPGWNVDISGVGDANVPAPYRVGLH 180
ANWPFDHYRSGPITVQLYRGAAHAPERVSVTFVDRLPGWNVDISGVGDANVPAPYRVGLH
Sbjct 121 ANWPFDHYRSGPITVQLYRGAAHAPERVSVTFVDRLPGWNVDISGVGDANVPAPYRVGLH 180
Query 181 RSPSSVAFGTVIVGVLIALAGVGLFVAVQTARGRRQFQPPMTTWYAAMLFAVIPLRNALP 240
RSPSSVAFGTVIVGVLIALAGVGLFVAVQTARGRRQFQPPMTTWYAAMLFAVIPLRNALP
Sbjct 181 RSPSSVAFGTVIVGVLIALAGVGLFVAVQTARGRRQFQPPMTTWYAAMLFAVIPLRNALP 240
Query 241 DAPPIGFWIDVTVVLWVVVALVTSMVLYILCWWWHLKPDVDETM 284
DAPPIGFWIDVTVVLWVVVALVTSMVLYILCWWWHLKPDVDETM
Sbjct 241 DAPPIGFWIDVTVVLWVVVALVTSMVLYILCWWWHLKPDVDETM 284
>gi|148824645|ref|YP_001289399.1| transmembrane protein [Mycobacterium tuberculosis F11]
gi|167966893|ref|ZP_02549170.1| conserved transmembrane protein [Mycobacterium tuberculosis H37Ra]
gi|253800480|ref|YP_003033481.1| hypothetical protein TBMG_03483 [Mycobacterium tuberculosis KZN
1435]
36 more sequence titles
Length=312
Score = 559 bits (1441), Expect = 2e-157, Method: Compositional matrix adjust.
Identities = 284/284 (100%), Positives = 284/284 (100%), Gaps = 0/284 (0%)
Query 1 LGRILRVVVGLVLVIAAYVTVIALYHSTGLGRPHEVAHGRPTADGTTVTLHVEQLQTIKG 60
LGRILRVVVGLVLVIAAYVTVIALYHSTGLGRPHEVAHGRPTADGTTVTLHVEQLQTIKG
Sbjct 29 LGRILRVVVGLVLVIAAYVTVIALYHSTGLGRPHEVAHGRPTADGTTVTLHVEQLQTIKG 88
Query 61 VLVANLAVSPGTELLDSQTQGLKDDLTVTVTSVVTPTKRTWSSGSLPGVFPVPLTISGDP 120
VLVANLAVSPGTELLDSQTQGLKDDLTVTVTSVVTPTKRTWSSGSLPGVFPVPLTISGDP
Sbjct 89 VLVANLAVSPGTELLDSQTQGLKDDLTVTVTSVVTPTKRTWSSGSLPGVFPVPLTISGDP 148
Query 121 ANWPFDHYRSGPITVQLYRGAAHAPERVSVTFVDRLPGWNVDISGVGDANVPAPYRVGLH 180
ANWPFDHYRSGPITVQLYRGAAHAPERVSVTFVDRLPGWNVDISGVGDANVPAPYRVGLH
Sbjct 149 ANWPFDHYRSGPITVQLYRGAAHAPERVSVTFVDRLPGWNVDISGVGDANVPAPYRVGLH 208
Query 181 RSPSSVAFGTVIVGVLIALAGVGLFVAVQTARGRRQFQPPMTTWYAAMLFAVIPLRNALP 240
RSPSSVAFGTVIVGVLIALAGVGLFVAVQTARGRRQFQPPMTTWYAAMLFAVIPLRNALP
Sbjct 209 RSPSSVAFGTVIVGVLIALAGVGLFVAVQTARGRRQFQPPMTTWYAAMLFAVIPLRNALP 268
Query 241 DAPPIGFWIDVTVVLWVVVALVTSMVLYILCWWWHLKPDVDETM 284
DAPPIGFWIDVTVVLWVVVALVTSMVLYILCWWWHLKPDVDETM
Sbjct 269 DAPPIGFWIDVTVVLWVVVALVTSMVLYILCWWWHLKPDVDETM 312
>gi|15843030|ref|NP_338067.1| hypothetical protein MT3541 [Mycobacterium tuberculosis CDC1551]
gi|254366039|ref|ZP_04982084.1| conserved transmembrane protein [Mycobacterium tuberculosis str.
Haarlem]
gi|13883372|gb|AAK47881.1| hypothetical protein MT3541 [Mycobacterium tuberculosis CDC1551]
gi|134151552|gb|EBA43597.1| conserved transmembrane protein [Mycobacterium tuberculosis str.
Haarlem]
gi|323717919|gb|EGB27108.1| membrane protein [Mycobacterium tuberculosis CDC1551A]
Length=312
Score = 557 bits (1436), Expect = 5e-157, Method: Compositional matrix adjust.
Identities = 283/284 (99%), Positives = 283/284 (99%), Gaps = 0/284 (0%)
Query 1 LGRILRVVVGLVLVIAAYVTVIALYHSTGLGRPHEVAHGRPTADGTTVTLHVEQLQTIKG 60
LGRILRVVVGLVLVIAAYVTVIALYHSTGLGRPHEVAHGRPTADGTTVTLHVEQLQTIKG
Sbjct 29 LGRILRVVVGLVLVIAAYVTVIALYHSTGLGRPHEVAHGRPTADGTTVTLHVEQLQTIKG 88
Query 61 VLVANLAVSPGTELLDSQTQGLKDDLTVTVTSVVTPTKRTWSSGSLPGVFPVPLTISGDP 120
VLVANLAVSPGTELLDSQTQGLKDDLTVTVTSVVTPTKRTWSSGSLPGVFPVPLTISGDP
Sbjct 89 VLVANLAVSPGTELLDSQTQGLKDDLTVTVTSVVTPTKRTWSSGSLPGVFPVPLTISGDP 148
Query 121 ANWPFDHYRSGPITVQLYRGAAHAPERVSVTFVDRLPGWNVDISGVGDANVPAPYRVGLH 180
ANWPFDHYRSGPITVQLYRGAAHAPERVSVTFVDRLPGWNVDISGVGDANVPAPYRVGLH
Sbjct 149 ANWPFDHYRSGPITVQLYRGAAHAPERVSVTFVDRLPGWNVDISGVGDANVPAPYRVGLH 208
Query 181 RSPSSVAFGTVIVGVLIALAGVGLFVAVQTARGRRQFQPPMTTWYAAMLFAVIPLRNALP 240
RSPSSVAFGTVIVGVLIALAGVGLFV VQTARGRRQFQPPMTTWYAAMLFAVIPLRNALP
Sbjct 209 RSPSSVAFGTVIVGVLIALAGVGLFVVVQTARGRRQFQPPMTTWYAAMLFAVIPLRNALP 268
Query 241 DAPPIGFWIDVTVVLWVVVALVTSMVLYILCWWWHLKPDVDETM 284
DAPPIGFWIDVTVVLWVVVALVTSMVLYILCWWWHLKPDVDETM
Sbjct 269 DAPPIGFWIDVTVVLWVVVALVTSMVLYILCWWWHLKPDVDETM 312
>gi|340628406|ref|YP_004746858.1| hypothetical protein MCAN_34521 [Mycobacterium canettii CIPT
140010059]
gi|340006596|emb|CCC45783.1| putative conserved transmembrane protein [Mycobacterium canettii
CIPT 140010059]
Length=284
Score = 557 bits (1436), Expect = 6e-157, Method: Compositional matrix adjust.
Identities = 281/284 (99%), Positives = 283/284 (99%), Gaps = 0/284 (0%)
Query 1 LGRILRVVVGLVLVIAAYVTVIALYHSTGLGRPHEVAHGRPTADGTTVTLHVEQLQTIKG 60
+GRILRVVVGLVLVIAAYVTVIALYHSTGLGRPHEVAHGR TADGTTVTLHVEQLQTIKG
Sbjct 1 MGRILRVVVGLVLVIAAYVTVIALYHSTGLGRPHEVAHGRSTADGTTVTLHVEQLQTIKG 60
Query 61 VLVANLAVSPGTELLDSQTQGLKDDLTVTVTSVVTPTKRTWSSGSLPGVFPVPLTISGDP 120
VLVANLAVSPGTELLDSQTQGLKDDLTVTVTSVVTPTKRTWSSGSLPGVFPVPLTISGDP
Sbjct 61 VLVANLAVSPGTELLDSQTQGLKDDLTVTVTSVVTPTKRTWSSGSLPGVFPVPLTISGDP 120
Query 121 ANWPFDHYRSGPITVQLYRGAAHAPERVSVTFVDRLPGWNVDISGVGDANVPAPYRVGLH 180
ANWPFDHYRSGPITVQLYRGAAHAPERVSVTFVDRLPGWNVDISGVGDANVPAPYRVGLH
Sbjct 121 ANWPFDHYRSGPITVQLYRGAAHAPERVSVTFVDRLPGWNVDISGVGDANVPAPYRVGLH 180
Query 181 RSPSSVAFGTVIVGVLIALAGVGLFVAVQTARGRRQFQPPMTTWYAAMLFAVIPLRNALP 240
RSPS+VAFGTVIVGVLIALAGVGLFVAVQTARGRRQFQPPMTTWYAAMLFAVIPLRNALP
Sbjct 181 RSPSTVAFGTVIVGVLIALAGVGLFVAVQTARGRRQFQPPMTTWYAAMLFAVIPLRNALP 240
Query 241 DAPPIGFWIDVTVVLWVVVALVTSMVLYILCWWWHLKPDVDETM 284
DAPPIGFWIDVTVVLWVVVALVTSMVLYILCWWWHLKPDVDETM
Sbjct 241 DAPPIGFWIDVTVVLWVVVALVTSMVLYILCWWWHLKPDVDETM 284
>gi|339296259|gb|AEJ48370.1| conserved membrane protein [Mycobacterium tuberculosis CCDC5079]
gi|339299862|gb|AEJ51972.1| conserved membrane protein [Mycobacterium tuberculosis CCDC5180]
Length=271
Score = 538 bits (1387), Expect = 3e-151, Method: Compositional matrix adjust.
Identities = 270/271 (99%), Positives = 271/271 (100%), Gaps = 0/271 (0%)
Query 14 VIAAYVTVIALYHSTGLGRPHEVAHGRPTADGTTVTLHVEQLQTIKGVLVANLAVSPGTE 73
+IAAYVTVIALYHSTGLGRPHEVAHGRPTADGTTVTLHVEQLQTIKGVLVANLAVSPGTE
Sbjct 1 MIAAYVTVIALYHSTGLGRPHEVAHGRPTADGTTVTLHVEQLQTIKGVLVANLAVSPGTE 60
Query 74 LLDSQTQGLKDDLTVTVTSVVTPTKRTWSSGSLPGVFPVPLTISGDPANWPFDHYRSGPI 133
LLDSQTQGLKDDLTVTVTSVVTPTKRTWSSGSLPGVFPVPLTISGDPANWPFDHYRSGPI
Sbjct 61 LLDSQTQGLKDDLTVTVTSVVTPTKRTWSSGSLPGVFPVPLTISGDPANWPFDHYRSGPI 120
Query 134 TVQLYRGAAHAPERVSVTFVDRLPGWNVDISGVGDANVPAPYRVGLHRSPSSVAFGTVIV 193
TVQLYRGAAHAPERVSVTFVDRLPGWNVDISGVGDANVPAPYRVGLHRSPSSVAFGTVIV
Sbjct 121 TVQLYRGAAHAPERVSVTFVDRLPGWNVDISGVGDANVPAPYRVGLHRSPSSVAFGTVIV 180
Query 194 GVLIALAGVGLFVAVQTARGRRQFQPPMTTWYAAMLFAVIPLRNALPDAPPIGFWIDVTV 253
GVLIALAGVGLFVAVQTARGRRQFQPPMTTWYAAMLFAVIPLRNALPDAPPIGFWIDVTV
Sbjct 181 GVLIALAGVGLFVAVQTARGRRQFQPPMTTWYAAMLFAVIPLRNALPDAPPIGFWIDVTV 240
Query 254 VLWVVVALVTSMVLYILCWWWHLKPDVDETM 284
VLWVVVALVTSMVLYILCWWWHLKPDVDETM
Sbjct 241 VLWVVVALVTSMVLYILCWWWHLKPDVDETM 271
>gi|254234031|ref|ZP_04927356.1| hypothetical protein TBCG_03374 [Mycobacterium tuberculosis C]
gi|124599560|gb|EAY58664.1| hypothetical protein TBCG_03374 [Mycobacterium tuberculosis C]
Length=313
Score = 407 bits (1045), Expect = 1e-111, Method: Compositional matrix adjust.
Identities = 253/296 (86%), Positives = 257/296 (87%), Gaps = 23/296 (7%)
Query 1 LGRILRVVVGLVLVIAAYVTVIALYHSTGLGRPHEVAHGRPTADGTTVTLHVEQLQTIKG 60
LGRILRVVVGLVLVIAAYVTVIALYHSTGLGRPHEVAHGRPTADGTTVTLHVEQLQTIKG
Sbjct 29 LGRILRVVVGLVLVIAAYVTVIALYHSTGLGRPHEVAHGRPTADGTTVTLHVEQLQTIKG 88
Query 61 VLVANLAVSPGTELLDSQTQGLKDDLTVTVTSVVTPTKRTWSSGSLPGVFPVPLTISGDP 120
VLVANLAVSPGTELLDSQTQGLK+DLTVTVTSVVTPTKRT + +
Sbjct 89 VLVANLAVSPGTELLDSQTQGLKEDLTVTVTSVVTPTKRT-----------LLECFAARR 137
Query 121 ANWPFDHYRS----GPITV--------QLYRGAAHAPERVSVTFVDRLPGWNVDISGVGD 168
+ P DH R G T QLYRGAAHAPERVSVTFVDRLPGWNVDISGVGD
Sbjct 138 LSRPADHLRGSSRIGRSTTTVRRRSRSQLYRGAAHAPERVSVTFVDRLPGWNVDISGVGD 197
Query 169 ANVPAPYRVGLHRSPSSVAFGTVIVGVLIALAGVGLFVAVQTARGRRQFQPPMTTWYAAM 228
ANVPAPYRVGLHRSPSSVAFGTVIVGVLIALAGVGLFV VQTARGRRQFQPPMTTWYAAM
Sbjct 198 ANVPAPYRVGLHRSPSSVAFGTVIVGVLIALAGVGLFVVVQTARGRRQFQPPMTTWYAAM 257
Query 229 LFAVIPLRNALPDAPPIGFWIDVTVVLWVVVALVTSMVLYILCWWWHLKPDVDETM 284
LFAVIPLRNALPDAPPIGFWIDVTVVLWVVVALVTSMVLYILCWWWHLKPDVDETM
Sbjct 258 LFAVIPLRNALPDAPPIGFWIDVTVVLWVVVALVTSMVLYILCWWWHLKPDVDETM 313
>gi|183981135|ref|YP_001849426.1| hypothetical protein MMAR_1115 [Mycobacterium marinum M]
gi|183174461|gb|ACC39571.1| conserved hypothetical transmembrane protein [Mycobacterium marinum
M]
Length=280
Score = 340 bits (872), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 178/274 (65%), Positives = 211/274 (78%), Gaps = 1/274 (0%)
Query 9 VGLVLVIAAYVTVIALYHSTGLGRPHEVAHGRPTADGTTVTLHVEQLQTIKGVLVANLAV 68
VGLVL + AYV LY + G G PH++ GRPTADGTTVT+ +E++Q+ VL ANLAV
Sbjct 6 VGLVLFVVAYVGSTLLYGNAGKG-PHDLTQGRPTADGTTVTISLEEVQSSNTVLSANLAV 64
Query 69 SPGTELLDSQTQGLKDDLTVTVTSVVTPTKRTWSSGSLPGVFPVPLTISGDPANWPFDHY 128
+PG LLD +T+GL DDL+V VTS VTPTKRTWS G LPGVFPVPL I+G+ A+WPFDHY
Sbjct 65 TPGPGLLDPRTEGLSDDLSVVVTSSVTPTKRTWSKGMLPGVFPVPLAITGNVADWPFDHY 124
Query 129 RSGPITVQLYRGAAHAPERVSVTFVDRLPGWNVDISGVGDANVPAPYRVGLHRSPSSVAF 188
RSGPITV+L+ GAA P+R V FVD L GW +DI GD PYR+ L RSPS+ AF
Sbjct 125 RSGPITVELFSGAAKVPQRAKVRFVDSLAGWQIDIPTAGDGTGVTPYRLALQRSPSTAAF 184
Query 189 GTVIVGVLIALAGVGLFVAVQTARGRRQFQPPMTTWYAAMLFAVIPLRNALPDAPPIGFW 248
+I+GVL+ +AG+ LFVAVQTAR RR FQPPMTTWYAAMLFAV+PLRNALP+APP G W
Sbjct 185 ALLIIGVLVTIAGLALFVAVQTARDRRPFQPPMTTWYAAMLFAVVPLRNALPNAPPFGAW 244
Query 249 IDVTVVLWVVVALVTSMVLYILCWWWHLKPDVDE 282
IDV VV+WV+V LV SM +YI CWW HLKP D+
Sbjct 245 IDVRVVVWVIVVLVISMAIYISCWWRHLKPASDK 278
>gi|296168761|ref|ZP_06850452.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295896563|gb|EFG76206.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length=283
Score = 300 bits (769), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 164/279 (59%), Positives = 208/279 (75%), Gaps = 15/279 (5%)
Query 4 ILRVVVGLVLVIAAYVTVIALYHSTGLGRPH--EVAHGRPTADGTTVTLHVEQLQTIKGV 61
I+ ++VG+V AYV +A+Y S+G GR H E A G D +T TL +E +Q+ V
Sbjct 5 IIALIVGIV---GAYVASVAIYASSG-GRHHQPETAAG---GDRSTATLAIEDIQSNYSV 57
Query 62 LVANLAVSPGTELLDSQTQGLKDDLTVTVTSVVTPTKRTWSSGSLPGVFPVPLTISGDPA 121
L+ NL++SPG+ LLD +TQ K+D+++ V SV TPT+RTW+ G LPGVFPVPLTI+GD
Sbjct 58 LMGNLSISPGSALLDPETQHFKEDVSLRVRSVATPTRRTWTKGMLPGVFPVPLTIAGDIE 117
Query 122 NWPFDHYRSGPITVQLYRGAAHAPERVSVTFVDRLPGWNVDISGVGDANVPAPYRVGLHR 181
+WPFDHYRSGP+ V+L G PERV VTFV+ L GW V +G G PYR +HR
Sbjct 118 SWPFDHYRSGPVEVELMHGPGEVPERVPVTFVNHLSGWQVSTAGSG------PYRASVHR 171
Query 182 SPSSVAFGTVIVGVLIALAGVGLFVAVQTARGRRQFQPPMTTWYAAMLFAVIPLRNALPD 241
S S+ AFG VI+ VL+A+AG+GLFVAVQT R RR+FQPPMTTWYAAMLFAV+PLRNALP
Sbjct 172 SLSAAAFGIVILCVLVAIAGLGLFVAVQTVRNRRKFQPPMTTWYAAMLFAVVPLRNALPG 231
Query 242 APPIGFWIDVTVVLWVVVALVTSMVLYILCWWWHLKPDV 280
+PP G WID+T+VLWV+V LV SM+LYI+CWW HL+P+V
Sbjct 232 SPPFGGWIDITLVLWVLVVLVVSMLLYIMCWWRHLRPEV 270
>gi|342861891|ref|ZP_08718536.1| hypothetical protein MCOL_23495 [Mycobacterium colombiense CECT
3035]
gi|342130708|gb|EGT84012.1| hypothetical protein MCOL_23495 [Mycobacterium colombiense CECT
3035]
Length=305
Score = 272 bits (696), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 135/256 (53%), Positives = 173/256 (68%), Gaps = 5/256 (1%)
Query 24 LYHSTGLGRPHEVAHGRPTADGTTVTLHVEQLQTIKGVLVANLAVSPGTELLDSQTQGLK 83
LY +G GR + + D + T++VE +Q+ VL NLA +PG+ LLD +T LK
Sbjct 27 LYAQSGTGRRLDASAQTADGDKPSATINVEDIQSNNSVLAVNLAFNPGSALLDPKTHHLK 86
Query 84 DDLTVTVTSVVTPTKRTWSSGSLPGVFPVPLTISGDPANWPFDHYRSGPITVQLYRG--A 141
DDL++ V S P++ TW+ G LPG+ VPLTI+G WPFD YRSGPI V+++ G
Sbjct 87 DDLSLRVRSSAMPSRHTWTKGMLPGLMAVPLTIAGQIERWPFDQYRSGPIEVEIFYGPDT 146
Query 142 AHAPERVSVTFVDRLPGWNVDISGVGDANVPAPYRVGLHRSPSSVAFGTVIVGVLIALAG 201
AP+ V VTFVD L GW + + PYR+ +HRS S+ AF VI+GVLI +A
Sbjct 147 DRAPDHVPVTFVDHLSGWRLSAT---RTQADGPYRLNVHRSLSTAAFAIVILGVLITIAS 203
Query 202 VGLFVAVQTARGRRQFQPPMTTWYAAMLFAVIPLRNALPDAPPIGFWIDVTVVLWVVVAL 261
+ L VA+QTAR RR FQPPMTTWYAAMLFAV+PLRNALP +PP G W+D+TVV+WV+VAL
Sbjct 204 LALVVAIQTARDRRPFQPPMTTWYAAMLFAVVPLRNALPGSPPFGSWVDITVVIWVLVAL 263
Query 262 VTSMVLYILCWWWHLK 277
SM+LYI CWW HL
Sbjct 264 AVSMILYIGCWWRHLN 279
>gi|254776806|ref|ZP_05218322.1| hypothetical protein MaviaA2_19366 [Mycobacterium avium subsp.
avium ATCC 25291]
Length=294
Score = 271 bits (692), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 138/266 (52%), Positives = 178/266 (67%), Gaps = 9/266 (3%)
Query 16 AAYVTVIALYHSTGLGRPHEVAHGRPTADGT--TVTLHVEQLQTIKGVLVANLAVSPGTE 73
AAY+ + LY +G GR + PT DG + T++VE +Q+ VL NLA +PG+
Sbjct 14 AAYIGSVVLYAQSGTGR--RIDEANPTTDGDRPSATINVEDIQSNNSVLAVNLAFNPGSA 71
Query 74 LLDSQTQGLKDDLTVTVTSVVTPTKRTWSSGSLPGVFPVPLTISGDPANWPFDHYRSGPI 133
LLD +T LK+DL++ V S P++ TW+ G LPG+ VPLTI+G WPFD Y SGP+
Sbjct 72 LLDPKTHHLKEDLSLRVRSSAMPSRHTWTKGMLPGLMAVPLTIAGQIERWPFDQYHSGPL 131
Query 134 TVQLYRG--AAHAPERVSVTFVDRLPGWNVDISGVGDANVPAPYRVGLHRSPSSVAFGTV 191
V+++ G P+ V VTFVD L GW + + PYR+ + RS S+ AF V
Sbjct 132 EVEIFYGPDTDRDPDHVPVTFVDHLSGWQLTAT---RPQADGPYRLHVRRSMSTAAFAIV 188
Query 192 IVGVLIALAGVGLFVAVQTARGRRQFQPPMTTWYAAMLFAVIPLRNALPDAPPIGFWIDV 251
I+GVLIA+A + LFVA+QT R RR FQPPMTTWYAAMLFAV+PLRNALP +PP G W+D+
Sbjct 189 ILGVLIAIASLALFVAIQTTRDRRPFQPPMTTWYAAMLFAVVPLRNALPGSPPFGSWVDI 248
Query 252 TVVLWVVVALVTSMVLYILCWWWHLK 277
TVV+WV+VAL SMVLYI CWW HL
Sbjct 249 TVVIWVLVALAISMVLYIGCWWRHLN 274
>gi|118464448|ref|YP_883511.1| hypothetical protein MAV_4376 [Mycobacterium avium 104]
gi|118165735|gb|ABK66632.1| conserved hypothetical protein [Mycobacterium avium 104]
Length=295
Score = 270 bits (691), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 138/266 (52%), Positives = 178/266 (67%), Gaps = 9/266 (3%)
Query 16 AAYVTVIALYHSTGLGRPHEVAHGRPTADGT--TVTLHVEQLQTIKGVLVANLAVSPGTE 73
AAY+ + LY +G GR + PT DG + T++VE +Q+ VL NLA +PG+
Sbjct 19 AAYIGSVVLYAQSGTGR--RIDEANPTMDGDRPSATINVEDIQSNNSVLAVNLAFNPGSA 76
Query 74 LLDSQTQGLKDDLTVTVTSVVTPTKRTWSSGSLPGVFPVPLTISGDPANWPFDHYRSGPI 133
LLD +T LK+DL++ V S P++ TW+ G LPG+ VPLTI+G WPFD Y SGP+
Sbjct 77 LLDPKTHHLKEDLSLRVRSSAMPSRHTWTKGMLPGLMAVPLTIAGQIERWPFDQYHSGPL 136
Query 134 TVQLYRG--AAHAPERVSVTFVDRLPGWNVDISGVGDANVPAPYRVGLHRSPSSVAFGTV 191
V+++ G P+ V VTFVD L GW + + PYR+ + RS S+ AF V
Sbjct 137 EVEIFYGPDTDRDPDHVPVTFVDHLSGWQLTAT---RPQADGPYRLHVRRSMSTAAFAIV 193
Query 192 IVGVLIALAGVGLFVAVQTARGRRQFQPPMTTWYAAMLFAVIPLRNALPDAPPIGFWIDV 251
I+GVLIA+A + LFVA+QT R RR FQPPMTTWYAAMLFAV+PLRNALP +PP G W+D+
Sbjct 194 ILGVLIAIASLALFVAIQTTRDRRPFQPPMTTWYAAMLFAVVPLRNALPGSPPFGSWVDI 253
Query 252 TVVLWVVVALVTSMVLYILCWWWHLK 277
TVV+WV+VAL SMVLYI CWW HL
Sbjct 254 TVVIWVLVALAISMVLYIGCWWRHLN 279
>gi|41410352|ref|NP_963188.1| hypothetical protein MAP4254 [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|41399186|gb|AAS06804.1| hypothetical protein MAP_4254 [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|336460739|gb|EGO39628.1| hypothetical protein MAPs_37730 [Mycobacterium avium subsp. paratuberculosis
S397]
Length=299
Score = 270 bits (691), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 138/266 (52%), Positives = 178/266 (67%), Gaps = 9/266 (3%)
Query 16 AAYVTVIALYHSTGLGRPHEVAHGRPTADGT--TVTLHVEQLQTIKGVLVANLAVSPGTE 73
AAY+ + LY +G GR + PT DG + T++VE +Q+ VL NLA +PG+
Sbjct 19 AAYIGSVVLYAQSGTGR--RIDEANPTMDGDRPSATINVEDIQSNNSVLAVNLAFNPGSA 76
Query 74 LLDSQTQGLKDDLTVTVTSVVTPTKRTWSSGSLPGVFPVPLTISGDPANWPFDHYRSGPI 133
LLD +T LK+DL++ V S P++ TW+ G LPG+ VPLTI+G WPFD Y SGP+
Sbjct 77 LLDPKTHHLKEDLSLRVRSSAMPSRHTWTKGMLPGLMAVPLTIAGQIERWPFDQYHSGPL 136
Query 134 TVQLYRG--AAHAPERVSVTFVDRLPGWNVDISGVGDANVPAPYRVGLHRSPSSVAFGTV 191
V+++ G P+ V VTFVD L GW + + PYR+ + RS S+ AF V
Sbjct 137 EVEIFYGPDTDRDPDHVPVTFVDHLSGWQLTAT---RPQADGPYRLHVRRSMSTAAFAIV 193
Query 192 IVGVLIALAGVGLFVAVQTARGRRQFQPPMTTWYAAMLFAVIPLRNALPDAPPIGFWIDV 251
I+GVLIA+A + LFVA+QT R RR FQPPMTTWYAAMLFAV+PLRNALP +PP G W+D+
Sbjct 194 ILGVLIAIASLALFVAIQTTRDRRPFQPPMTTWYAAMLFAVVPLRNALPGSPPFGSWVDI 253
Query 252 TVVLWVVVALVTSMVLYILCWWWHLK 277
TVV+WV+VAL SMVLYI CWW HL
Sbjct 254 TVVIWVLVALAISMVLYIGCWWRHLN 279
>gi|296168760|ref|ZP_06850451.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295896562|gb|EFG76205.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length=296
Score = 270 bits (689), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 148/278 (54%), Positives = 190/278 (69%), Gaps = 13/278 (4%)
Query 9 VGLVLVI-AAYVTVIALYHST----GLGRPHEVAHGRPTADGTTVTLHVEQLQTIKGVLV 63
VG VL+I YV ++ LY ST G ++ A TA + TL VE++Q+ +V
Sbjct 11 VGFVLLIVGTYVALVELYQSTVEGTSAGTLNDTAE---TAGQSMATLTVEEMQSNYSAVV 67
Query 64 ANLAVSPGTELLDSQTQGLKDDLTVTVTSVVTPTKRTWSSGSLPGVFPVPLTISGDPANW 123
A +AV+PG LLD T LK+DL + V S P++R ++ G LPGVFP+PLTI+G W
Sbjct 68 ATVAVAPGPALLDPVTHRLKEDLMLRVRSAAQPSRRDYTKGMLPGVFPLPLTIAGHIERW 127
Query 124 PFDHYRSGPITVQLYRGA--AHAPERVSVTFVDRLPGWNVDISGVGDANVPAPYRVGLHR 181
PFD+Y SGPI VQL+ GA PE + V +D LPG+ V + YR+ + R
Sbjct 128 PFDNYTSGPIEVQLFHGADTTKPPELIPVRLIDHLPGFKVSATKFAGHE---GYRMSVRR 184
Query 182 SPSSVAFGTVIVGVLIALAGVGLFVAVQTARGRRQFQPPMTTWYAAMLFAVIPLRNALPD 241
+PS+ FG VI GVLIA+A +GLFVA+QT R RR+FQPPMTTWYAAMLFAV+PLRNALP
Sbjct 185 APSTAVFGIVICGVLIAIAVLGLFVAIQTMRDRRKFQPPMTTWYAAMLFAVVPLRNALPG 244
Query 242 APPIGFWIDVTVVLWVVVALVTSMVLYILCWWWHLKPD 279
+PPIG WIDVTVVLWV+VALV +M+LYI+CWW HL+P+
Sbjct 245 SPPIGAWIDVTVVLWVIVALVVAMLLYIVCWWRHLRPE 282
>gi|254818862|ref|ZP_05223863.1| hypothetical protein MintA_02999 [Mycobacterium intracellulare
ATCC 13950]
Length=297
Score = 264 bits (674), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 138/263 (53%), Positives = 176/263 (67%), Gaps = 5/263 (1%)
Query 16 AAYVTVIALYHSTGLGRPHEVAHGRPTADGTTVTLHVEQLQTIKGVLVANLAVSPGTELL 75
AAY+ I +Y R + +AD + T++VE++Q+ VL NLA +PG+ LL
Sbjct 19 AAYIVSIMMYAQGDAVRRLDGITPVVSADEPSATINVEEIQSNYSVLAVNLAFNPGSALL 78
Query 76 DSQTQGLKDDLTVTVTSVVTPTKRTWSSGSLPGVFPVPLTISGDPANWPFDHYRSGPITV 135
D +T LK+DL++ V S P++ TW+ G LPG+ VPLTI+G WPFD YRSG I V
Sbjct 79 DPKTHHLKEDLSLRVRSSAMPSRHTWTKGMLPGLMSVPLTIAGQIERWPFDQYRSGLIEV 138
Query 136 QLYRG--AAHAPERVSVTFVDRLPGWNVDISGVGDANVPAPYRVGLHRSPSSVAFGTVIV 193
+++ G AP V VTFVD L GW + + PYR+ L RS S+ AF VI+
Sbjct 139 EIFYGPDTDRAPAHVPVTFVDHLSGWQLTAT---RPQADGPYRLQLRRSLSTAAFAIVIL 195
Query 194 GVLIALAGVGLFVAVQTARGRRQFQPPMTTWYAAMLFAVIPLRNALPDAPPIGFWIDVTV 253
GVLI +A + +FVAVQTAR RR FQPPMTTWYAAMLFAV+PLRNALP +PP G W+D+TV
Sbjct 196 GVLITIASLAVFVAVQTARDRRPFQPPMTTWYAAMLFAVVPLRNALPGSPPFGSWVDITV 255
Query 254 VLWVVVALVTSMVLYILCWWWHL 276
V+WV+VALV SMVLYI CWW HL
Sbjct 256 VIWVLVALVASMVLYIGCWWRHL 278
>gi|343924936|ref|ZP_08764472.1| hypothetical protein GOALK_029_00530 [Gordonia alkanivorans NBRC
16433]
gi|343765199|dbj|GAA11398.1| hypothetical protein GOALK_029_00530 [Gordonia alkanivorans NBRC
16433]
Length=277
Score = 179 bits (454), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 107/272 (40%), Positives = 154/272 (57%), Gaps = 15/272 (5%)
Query 5 LRVVVGLVLVIAAYVTVIALYHSTGLGRPHEVAHGRPTADGTTVTLHVEQLQTIKGVLVA 64
L +VVGL++ AYV+V+ +Y G E + RP A+G V L + + +
Sbjct 14 LAIVVGLMI---AYVSVLVVYAKGGTDDGAEAS--RPVANGVVVYLDINTVNGADFEVAG 68
Query 65 NLAVSPGTELLDSQTQGLKDDLTVTVTSVVTPTKRTWSSGSLPGVFPVPLTISGDPANWP 124
+++ G +LLD + LK DLTV V+ V+ T+ T+ +G+ PGV PV L GD WP
Sbjct 69 TVSIDAGGDLLDGRGD-LKQDLTVDVSPTVSDTELTFPAGTRPGVLPVSLYSDGDIRLWP 127
Query 125 FDHYRSGPITVQLYRGAAHAPERVSVTFVDRLPGWNV---DISGVGDANVPAPYRVGLHR 181
FD Y + +TVQ + G V +D L GW++ D G A + V R
Sbjct 128 FDRYVAESVTVQAF-GPNDPALPTEVVLIDSLIGWDIKAGDTVAGGKA-----FPVTSSR 181
Query 182 SPSSVAFGTVIVGVLIALAGVGLFVAVQTARGRRQFQPPMTTWYAAMLFAVIPLRNALPD 241
+ +S+AF + +L+ L LFV++QT R R+ FQPPM TW+A MLFAV+PLRN P
Sbjct 182 AAASLAFDLALCAMLVVLPICTLFVSIQTVRHRKAFQPPMVTWFAVMLFAVLPLRNIFPG 241
Query 242 APPIGFWIDVTVVLWVVVALVTSMVLYILCWW 273
+PP G W+D +VVLWV+ LV S+ LY++ WW
Sbjct 242 SPPFGSWVDYSVVLWVLGGLVASLALYVVAWW 273
>gi|169628549|ref|YP_001702198.1| hypothetical protein MAB_1458 [Mycobacterium abscessus ATCC 19977]
gi|169240516|emb|CAM61544.1| Conserved hypothetical transmembrane protein [Mycobacterium abscessus]
Length=289
Score = 159 bits (401), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 97/276 (36%), Positives = 145/276 (53%), Gaps = 21/276 (7%)
Query 10 GLVLVIAAYVTVIALY----HSTGLGRPHEVAHGRPTADGTTVTLHVEQLQTIKGVLVAN 65
+VLV+ YV +A+Y H +G P + T V + ++ L+T+ L A
Sbjct 19 AVVLVLVIYVGFLAIYRMLDHHSG---PESADLDLSRDNETVVVIDLQDLRTVNNRLDAE 75
Query 66 LAVSPGTELLDSQTQGLKDDLTVTVTSVVTPTKRTWSSGSLPGVFPVPLTISGDPANWPF 125
+ V P LD+ L D++V + S + +R + G+LP L +GD +WPF
Sbjct 76 VVVLPAKTTLDAFGL-LNADMSVRLVSSLDYGERHFPRGTLPAAMDDTLVATGDAQSWPF 134
Query 126 DHYRSGPITVQLY--RGAAHAPERVSVTFVDRLPGWNVDIS------GVGDANVPAPYRV 177
D Y +G + ++ G P + + L GW V + G GD +
Sbjct 135 DEYSTGNLRAEVMVGNGVGRRPVPARIEVIGSLGGWRVSTATSQAPAGKGDQTT-----I 189
Query 178 GLHRSPSSVAFGTVIVGVLIALAGVGLFVAVQTARGRRQFQPPMTTWYAAMLFAVIPLRN 237
L R+ ++AF I VLI L + L VA++T +GR++F PP+TTW+ MLFA++PLRN
Sbjct 190 RLVRARGTLAFDVGICLVLITLPTMALIVAIETVKGRKKFHPPLTTWFGTMLFAIVPLRN 249
Query 238 ALPDAPPIGFWIDVTVVLWVVVALVTSMVLYILCWW 273
LP APP G WID +VLWV++ALV +MVLY+ WW
Sbjct 250 ILPGAPPPGAWIDQALVLWVLIALVVAMVLYVEAWW 285
>gi|118466993|ref|YP_883592.1| hypothetical protein MAV_4457 [Mycobacterium avium 104]
gi|118168280|gb|ABK69177.1| conserved hypothetical protein [Mycobacterium avium 104]
Length=295
Score = 158 bits (400), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 101/279 (37%), Positives = 142/279 (51%), Gaps = 17/279 (6%)
Query 7 VVVGLVLV-IAAYVTVIALYHSTGLGRPHEVAHGRPTADGTTVTLHVEQLQTIKGVLVAN 65
++ G+V+V + + V L S G P +++ G D T V L +E+L+ + L N
Sbjct 16 ILAGVVIVYVLSLFGVHFLQRSEGPLPPLDLSQG--GGDATIVQLRLEELKPVANRLSVN 73
Query 66 LAVSPGTELLDSQTQGLKDDLTVTVTSVVTPTKRTWSSGSLPGVFPVPLTISGDPANWPF 125
+ V PG D++ L +D+ V + + G P + GDP NWPF
Sbjct 74 VLVYPGVAQYDNRFDVLANDVAVRLYPTSDLGDLHYPKGKAPAQLSTTVEAHGDPGNWPF 133
Query 126 DHYRSGPITVQLYRGAA----HAPERVSVTFVDRLPGWNVDISGVGDANVPAPYR----- 176
D YR+ PI+ + G+ P RV VT L GW + + V D R
Sbjct 134 DSYRTEPISADAFVGSGDNLKKVPARVEVTGA--LDGWQITVDRVRDPAALPTQRGSDNG 191
Query 177 ---VGLHRSPSSVAFGTVIVGVLIALAGVGLFVAVQTARGRRQFQPPMTTWYAAMLFAVI 233
+ L R+ + F I VLI+L + L VA+ A GRR+F PP TWYAA LFA++
Sbjct 192 DVVITLKRAKGPLIFDLGICLVLISLPTLALLVAIPMAMGRRKFLPPFATWYAANLFAIV 251
Query 234 PLRNALPDAPPIGFWIDVTVVLWVVVALVTSMVLYILCW 272
PLRN LP APP G WID +V WV++ALVT+M LYI+ W
Sbjct 252 PLRNILPGAPPPGSWIDQAIVQWVLIALVTAMTLYIIAW 290
>gi|240167717|ref|ZP_04746376.1| transmembrane protein [Mycobacterium kansasii ATCC 12478]
Length=321
Score = 158 bits (400), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 92/240 (39%), Positives = 127/240 (53%), Gaps = 10/240 (4%)
Query 42 TADGTTVTLHVEQLQTIKGVLVANLAVSPGTELLDSQTQGLKDDLTVTVTSVVTPTKRTW 101
T + T V + EQL T+ L + V P ++D + L D +V + +
Sbjct 80 TTEDTVVLVRFEQLHTVANRLDVKVLVMPDDSMIDKRLDVLTTDTSVRLYPTNDLGDLQY 139
Query 102 SSGSLPGVFPVPLTISGDPANWPFDHYRSGPITVQLYRGAA----HAPERVSVTFVDRLP 157
G P + GDP NWPFD Y + I + GA + P RV VT L
Sbjct 140 PVGKSPAQVATTIEAHGDPGNWPFDTYTTDTIQADVLVGAGDTRQYKPARVEVT--GSLE 197
Query 158 GWNVDISGVGDA----NVPAPYRVGLHRSPSSVAFGTVIVGVLIALAGVGLFVAVQTARG 213
GW++ VGDA + P + L R+ + F I VL+ L + LFVA+Q G
Sbjct 198 GWDISAQRVGDASQTSDRPDNVIITLKRAKGPLVFDLGICLVLVTLPTLALFVAIQMVTG 257
Query 214 RRQFQPPMTTWYAAMLFAVIPLRNALPDAPPIGFWIDVTVVLWVVVALVTSMVLYILCWW 273
RR+F PP +TWYAAMLFAV+PLRN LP +PP G WID VV+WV++AL T+MV+Y++ W+
Sbjct 258 RRKFLPPFSTWYAAMLFAVVPLRNILPGSPPAGSWIDQAVVIWVLIALATAMVVYVIAWY 317
>gi|254776893|ref|ZP_05218409.1| hypothetical protein MaviaA2_19811 [Mycobacterium avium subsp.
avium ATCC 25291]
Length=295
Score = 157 bits (396), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 100/279 (36%), Positives = 141/279 (51%), Gaps = 17/279 (6%)
Query 7 VVVGLVLV-IAAYVTVIALYHSTGLGRPHEVAHGRPTADGTTVTLHVEQLQTIKGVLVAN 65
++ G+V+V + + V L S G P +++ G D T V L +E+L+ + L N
Sbjct 16 ILAGVVIVYVLSLFGVHFLQRSEGPLPPLDLSQG--GGDATIVQLRLEELKPVANRLSVN 73
Query 66 LAVSPGTELLDSQTQGLKDDLTVTVTSVVTPTKRTWSSGSLPGVFPVPLTISGDPANWPF 125
+ V PG D++ L +D+ V + + G P + GDP NWPF
Sbjct 74 VLVYPGVAQYDNRFDVLANDVAVRLYPTSDLGDLHYPKGKAPAQLSTTVEAHGDPGNWPF 133
Query 126 DHYRSGPITVQLYRGAA----HAPERVSVTFVDRLPGWNVDISGVGDANVPAPYR----- 176
D YR+ PI+ + G+ P RV VT L GW + + V D R
Sbjct 134 DSYRTEPISADAFVGSGDNLKKVPARVEVTGA--LDGWQITVDRVRDPAALPTQRGSDNG 191
Query 177 ---VGLHRSPSSVAFGTVIVGVLIALAGVGLFVAVQTARGRRQFQPPMTTWYAAMLFAVI 233
+ L R+ + F I VLI+L + L VA+ A GRR+F PP TWYAA LFA++
Sbjct 192 DVVITLKRAKGPLIFDLGICLVLISLPTLALLVAIPMAMGRRKFLPPFATWYAANLFAIV 251
Query 234 PLRNALPDAPPIGFWIDVTVVLWVVVALVTSMVLYILCW 272
PLRN LP APP G WID +V WV++ALV +M LYI+ W
Sbjct 252 PLRNILPGAPPPGSWIDQAIVQWVLIALVAAMTLYIIAW 290
>gi|41410273|ref|NP_963109.1| hypothetical protein MAP4175 [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|41399107|gb|AAS06725.1| hypothetical protein MAP_4175 [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|336460654|gb|EGO39545.1| hypothetical protein MAPs_38560 [Mycobacterium avium subsp. paratuberculosis
S397]
Length=306
Score = 156 bits (395), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 100/279 (36%), Positives = 141/279 (51%), Gaps = 17/279 (6%)
Query 7 VVVGLVLV-IAAYVTVIALYHSTGLGRPHEVAHGRPTADGTTVTLHVEQLQTIKGVLVAN 65
++ G+V+V + + V L S G P +++ G D T V L +E+L+ + L N
Sbjct 27 ILAGVVIVYVLSLFGVHFLQRSEGPLPPLDLSQG--GGDATIVQLRLEELKPVANRLSVN 84
Query 66 LAVSPGTELLDSQTQGLKDDLTVTVTSVVTPTKRTWSSGSLPGVFPVPLTISGDPANWPF 125
+ V PG D++ L +D+ V + + G P + GDP NWPF
Sbjct 85 VLVYPGVAQYDNRFDVLANDVAVRLYPTSDLGDLHYPKGKAPAQLSTTVEAHGDPGNWPF 144
Query 126 DHYRSGPITVQLYRGAA----HAPERVSVTFVDRLPGWNVDISGVGDANVPAPYR----- 176
D YR+ PI+ + G+ P RV VT L GW + + V D R
Sbjct 145 DSYRTEPISADAFVGSGDNLKKVPARVEVTGA--LDGWQITVDRVRDPAALPTQRGSDNG 202
Query 177 ---VGLHRSPSSVAFGTVIVGVLIALAGVGLFVAVQTARGRRQFQPPMTTWYAAMLFAVI 233
+ L R+ + F I VLI+L + L VA+ A GRR+F PP TWYAA LFA++
Sbjct 203 DVVITLKRAKGPLIFDLGICLVLISLPTLALLVAIPMAMGRRKFLPPFATWYAANLFAIV 262
Query 234 PLRNALPDAPPIGFWIDVTVVLWVVVALVTSMVLYILCW 272
PLRN LP APP G WID +V WV++ALV +M LYI+ W
Sbjct 263 PLRNILPGAPPPGSWIDQAIVQWVLIALVAAMTLYIIAW 301
>gi|145222595|ref|YP_001133273.1| hypothetical protein Mflv_2007 [Mycobacterium gilvum PYR-GCK]
gi|315443060|ref|YP_004075939.1| hypothetical protein Mspyr1_14300 [Mycobacterium sp. Spyr1]
gi|145215081|gb|ABP44485.1| putative conserved transmembrane protein [Mycobacterium gilvum
PYR-GCK]
gi|315261363|gb|ADT98104.1| hypothetical protein Mspyr1_14300 [Mycobacterium sp. Spyr1]
Length=286
Score = 156 bits (395), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 96/279 (35%), Positives = 143/279 (52%), Gaps = 4/279 (1%)
Query 1 LGRILRVVVGLVLVIAAYVTVIALYHSTGLGRPHEVAHGRPTADGTTVTLHVEQLQTIKG 60
L R +R+ L +V YV + Y P A ++ V++ + + T
Sbjct 9 LRRRIRITSSLAIVGLIYVASLFGYWWVSSSYPALPAFDPSRSEQPVVSIDMGSIHTTSN 68
Query 61 VLVANLAVSPGTELLDSQTQGLKDDLTVTVTSVVTPTKRTWSSGSLPGVFPVPLTISGDP 120
L ++ + P +D + L D+ + + V + + G PG + GD
Sbjct 69 ELEVSVLLIPPQRYIDPELGVLNTDIAIRLYPWVDLGELKFPKGQTPGSIDATIEAHGDA 128
Query 121 ANWPFDHYRSGPITVQLYRGAA--HAPERVSVTFVDRLPGWNVDISGVGDANVPAPYRVG 178
NWPFD+Y + P+T G+ + V F + GWNV+I + PA +
Sbjct 129 DNWPFDNYTTKPLTADALVGSGDDRTVQPAEVRFSGGIEGWNVEIKQA--PSDPAASVIE 186
Query 179 LHRSPSSVAFGTVIVGVLIALAGVGLFVAVQTARGRRQFQPPMTTWYAAMLFAVIPLRNA 238
L R ++AF I VLIAL + + VA++T GRRQF PP+ TW+AAMLFAV+PLRN
Sbjct 187 LSRHRGTLAFDLGICLVLIALPAMAMIVAIETVMGRRQFLPPLCTWFAAMLFAVVPLRNI 246
Query 239 LPDAPPIGFWIDVTVVLWVVVALVTSMVLYILCWWWHLK 277
LP APP G WID VVLWV++ALV++M +YI+ W+ + K
Sbjct 247 LPGAPPPGAWIDQAVVLWVLIALVSAMGIYIIAWYRYYK 285
>gi|240167716|ref|ZP_04746375.1| hypothetical protein MkanA1_00270 [Mycobacterium kansasii ATCC
12478]
Length=300
Score = 155 bits (393), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 100/286 (35%), Positives = 148/286 (52%), Gaps = 23/286 (8%)
Query 3 RILRVVVGLVLVIAAYVTVIALYHSTGLGRPHEVAHGRP--------TADGTTVTLHVEQ 54
R R+ +GL +V+ +I +Y + G H +A P T + T V + +E+
Sbjct 17 RGTRLAIGLAVVLG----IIVVYALSLFGV-HLLATSAPPLPEPDLGTTEDTVVQVRLEK 71
Query 55 LQTIKGVLVANLAVSPGTELLDSQTQGLKDDLTVTVTSVVTPTKRTWSSGSLPGVFPVPL 114
L+T+ L N+ V P D L DL V + + G P +
Sbjct 72 LETVANRLTVNVLVIPEDSKFDKHLDVLTQDLAVRLYPENDLGDLQYPVGKTPAQVSTAI 131
Query 115 TISGDPANWPFDHYRSGPITVQLYRGAAHA----PERVSVTFVDRLPGWNVDISGVGDAN 170
GDPANWPFD Y +G I+ + G + P RV V + L GW+V + VG+++
Sbjct 132 EAEGDPANWPFDSYTTGIISADVIVGTGESRVKEPARVEV--IGSLDGWDVSVQRVGESS 189
Query 171 V----PAPYRVGLHRSPSSVAFGTVIVGVLIALAGVGLFVAVQTARGRRQFQPPMTTWYA 226
P + LHR+ S+ F I+ VLI+L +GL+V++ A GR++F PP +W+A
Sbjct 190 QTTSRPDNVIITLHRAKGSLIFDLGIILVLISLPTLGLWVSIPMALGRKKFLPPFVSWFA 249
Query 227 AMLFAVIPLRNALPDAPPIGFWIDVTVVLWVVVALVTSMVLYILCW 272
AMLFAV+PLRN LP PP G WID V LWV++AL+ +M L+I +
Sbjct 250 AMLFAVVPLRNILPGNPPPGSWIDQAVTLWVLIALIVAMSLFIFAY 295
>gi|296168569|ref|ZP_06850373.1| transmembrane protein [Mycobacterium parascrofulaceum ATCC BAA-614]
gi|295896632|gb|EFG76271.1| transmembrane protein [Mycobacterium parascrofulaceum ATCC BAA-614]
Length=311
Score = 154 bits (388), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 97/276 (36%), Positives = 139/276 (51%), Gaps = 12/276 (4%)
Query 7 VVVGLVLVIAAYVTVIALYHSTGLGRPHEVAHGRPTADGTTVTLHVEQLQTIKGVLVANL 66
+V L+++ A + + L + P V + AD + V + +E+L T+ L N+
Sbjct 28 IVAALIVIYALSLIAVHLLAKSAPALP-SVDLSKVEADDSVVQVRLEKLDTVANRLTVNV 86
Query 67 AVSPGTELLDSQTQGLKDDLTVTVTSVVTPTKRTWSSGSLPGVFPVPLTISGDPANWPFD 126
V P L D L D V + + G P + GDPANWPFD
Sbjct 87 TVYPKDSLYDKNFGVLTTDAAVRLYPDNDLGDLQYPVGKAPAQVSTTIVAHGDPANWPFD 146
Query 127 HYRSGPITVQLYRGAA----HAPERVSVTFVDRLPGWNVDISGVGDANVPAP-----YRV 177
Y++ I ++ G AP RV T +L GW+ ++ + D P +
Sbjct 147 TYKTEVIAADVFTGTGANREKAPARVEAT--GKLDGWDATVTRIHDPEDANPDVQDDIVI 204
Query 178 GLHRSPSSVAFGTVIVGVLIALAGVGLFVAVQTARGRRQFQPPMTTWYAAMLFAVIPLRN 237
L RS ++ F I VLIAL + L+VA+ A GR F PP+ TW+AA+LFAV+PLRN
Sbjct 205 TLQRSKGALIFDVGICLVLIALPVLALWVAIPMALGRTTFLPPLGTWFAALLFAVVPLRN 264
Query 238 ALPDAPPIGFWIDVTVVLWVVVALVTSMVLYILCWW 273
LP +PP G WID VVLWV++ LVT+M L+I+ WW
Sbjct 265 FLPGSPPPGSWIDQAVVLWVLIGLVTAMSLFIVAWW 300
>gi|342861802|ref|ZP_08718447.1| hypothetical protein MCOL_23050 [Mycobacterium colombiense CECT
3035]
gi|342130619|gb|EGT83923.1| hypothetical protein MCOL_23050 [Mycobacterium colombiense CECT
3035]
Length=308
Score = 152 bits (384), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 95/282 (34%), Positives = 142/282 (51%), Gaps = 10/282 (3%)
Query 2 GRILRVVVGLVL-VIAAYVTVIALYHSTGLGRPH--EVAHGRPTADGTTVTLHVEQLQTI 58
GR + + +G V +I YV + H P V + A+ + V + +E+L +
Sbjct 16 GRQIAIAIGAVASLIVIYVLSLIAVHLLAKSAPPLPAVDLSKVEAEDSVVQVRLEKLDPV 75
Query 59 KGVLVANLAVSPGTELLDSQTQGLKDDLTVTVTSVVTPTKRTWSSGSLPGVFPVPLTISG 118
L N+ V P L D L D V + + G P + G
Sbjct 76 ANRLTVNVLVYPKDTLYDKNFGVLTADAAVRLYPDNDLGDLQYPIGKAPAQVTTTIEAHG 135
Query 119 DPANWPFDHYRSGPITVQLYRGAAHAPERVS--VTFVDRLPGWNVDISGVGDA-----NV 171
DPANWPFD YR+G I+ ++ G+ E+ + V L GW+ ++ V DA +V
Sbjct 136 DPANWPFDSYRTGVISADVFTGSGANKEKTAARVEATGGLDGWDATVTRVHDAEDNNPDV 195
Query 172 PAPYRVGLHRSPSSVAFGTVIVGVLIALAGVGLFVAVQTARGRRQFQPPMTTWYAAMLFA 231
+ LHR+ + F I VLI+L + L+VA+ A GR F PP+TTWY AMLFA
Sbjct 196 KDDLVITLHRAKGQLIFDVGICLVLISLPVLALWVAIPVALGRTSFLPPLTTWYGAMLFA 255
Query 232 VIPLRNALPDAPPIGFWIDVTVVLWVVVALVTSMVLYILCWW 273
++PLRN LP +PP G W+D +VLWV++ LV ++ L+++ WW
Sbjct 256 IVPLRNILPGSPPYGSWVDQAIVLWVLIGLVGALTLFLVGWW 297
>gi|342861806|ref|ZP_08718451.1| hypothetical protein MCOL_23070 [Mycobacterium colombiense CECT
3035]
gi|342130623|gb|EGT83927.1| hypothetical protein MCOL_23070 [Mycobacterium colombiense CECT
3035]
Length=311
Score = 152 bits (383), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 98/286 (35%), Positives = 142/286 (50%), Gaps = 23/286 (8%)
Query 6 RVVVGLVLVIAAYVT-VIALY------HSTGLGRPHEVAHGRPTADGTTVTLHVEQLQTI 58
R+ +G+ ++ A V V++L+ S G P +++ G D T V L +E+L+ +
Sbjct 25 RIAIGVCILAAVIVVYVLSLFGVHFLQRSEGPLPPLDLSQG--GGDATIVQLRLEELKPV 82
Query 59 KGVLVANLAVSPGTELLDSQTQGLKDDLTVTVTSVVTPTKRTWSSGSLPGVFPVPLTISG 118
L + PG D++ L +D+ V + + G P + G
Sbjct 83 ANRLSVEVLAYPGIAQYDNRFDVLANDVAVRLYPTSDLGDLQYPKGKAPAQLSTTIEAHG 142
Query 119 DPANWPFDHYRSGPITVQLYRGAA----HAPERVSVTFVDRLPGWNVDISGVGDANVPAP 174
DP NWPFD Y++ PI + G P RV VT L GW + ++ V D +
Sbjct 143 DPGNWPFDSYQTEPIAADAFVGTGDNRKKVPARVEVTGA--LDGWQISVNRVHDPSALPT 200
Query 175 YR--------VGLHRSPSSVAFGTVIVGVLIALAGVGLFVAVQTARGRRQFQPPMTTWYA 226
R + L R+ + F I VLI+L + L VA+ A GRR+F PP TWYA
Sbjct 201 SRASDNGNVVITLKRAKGPLIFDLGICLVLISLPTLALLVAIPMALGRRKFLPPFATWYA 260
Query 227 AMLFAVIPLRNALPDAPPIGFWIDVTVVLWVVVALVTSMVLYILCW 272
A LFA++PLRN LP APP G WID +V WV++ALV +M LYI+ W
Sbjct 261 ANLFAIVPLRNILPGAPPPGSWIDQAIVQWVLIALVAAMSLYIVAW 306
>gi|308396517|ref|ZP_07492333.2| conserved membrane protein [Mycobacterium tuberculosis SUMu012]
gi|308367090|gb|EFP55941.1| conserved membrane protein [Mycobacterium tuberculosis SUMu012]
gi|339293740|gb|AEJ45851.1| transmembrane protein [Mycobacterium tuberculosis CCDC5079]
gi|339297379|gb|AEJ49489.1| transmembrane protein [Mycobacterium tuberculosis CCDC5180]
Length=279
Score = 152 bits (383), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 90/240 (38%), Positives = 126/240 (53%), Gaps = 10/240 (4%)
Query 42 TADGTTVTLHVEQLQTIKGVLVANLAVSPGTELLDSQTQGLKDDLTVTVTSVVTPTKRTW 101
T D T V + E+L T+ L + V P ++D + Q L D +V + +
Sbjct 38 TTDDTVVLIRFEELHTVANRLDVKVLVLPDDSMIDHRLQVLTTDTSVRLYPENELGDLQY 97
Query 102 SSGSLPGVFPVPLTISGDPANWPFDHYRSGPITVQLYRGAA----HAPERVSVTFVDRLP 157
G LP + G+P WPFD Y + + + GA + P RV VT L
Sbjct 98 PVGKLPAQVATTIEAHGNPGAWPFDTYTTDTVQADVLVGAGDNRQYVPARVEVT--GSLE 155
Query 158 GWNVDISGVGDA----NVPAPYRVGLHRSPSSVAFGTVIVGVLIALAGVGLFVAVQTARG 213
GW++ VG++ + P + L R+ + F I VLI L + LFVA+Q G
Sbjct 156 GWDISAVRVGESSQTSDRPDNVIITLKRAKGPLVFDLGICLVLITLPTLALFVAIQMITG 215
Query 214 RRQFQPPMTTWYAAMLFAVIPLRNALPDAPPIGFWIDVTVVLWVVVALVTSMVLYILCWW 273
RR+FQPP TWYAAMLFAV+PLR LP +PP G WID VV+WV++AL +MV+YI+ W+
Sbjct 216 RRKFQPPFGTWYAAMLFAVVPLRTILPGSPPAGAWIDRAVVIWVLIALAAAMVVYIVAWY 275
>gi|340625734|ref|YP_004744186.1| hypothetical protein MCAN_07181 [Mycobacterium canettii CIPT
140010059]
gi|340003924|emb|CCC43058.1| putative conserved transmembrane protein [Mycobacterium canettii
CIPT 140010059]
Length=313
Score = 152 bits (383), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 89/240 (38%), Positives = 127/240 (53%), Gaps = 10/240 (4%)
Query 42 TADGTTVTLHVEQLQTIKGVLVANLAVSPGTELLDSQTQGLKDDLTVTVTSVVTPTKRTW 101
T D T V + E+L T+ L + V P ++D + + L D +V + +
Sbjct 72 TTDDTVVLIRFEELHTVANRLDVKVLVLPDDSMIDHRLEVLTTDTSVRLYPENELGDLQY 131
Query 102 SSGSLPGVFPVPLTISGDPANWPFDHYRSGPITVQLYRGAA----HAPERVSVTFVDRLP 157
G LP + G+P WPFD Y + + + GA + P RV VT L
Sbjct 132 PVGKLPAQVATTIEAHGNPGAWPFDTYTTDTVQADVLVGAGDNRQYVPARVEVT--GSLE 189
Query 158 GWNVDISGVGDA----NVPAPYRVGLHRSPSSVAFGTVIVGVLIALAGVGLFVAVQTARG 213
GW++ + VG++ + P + L R+ + F I VLI L + LFVA+Q G
Sbjct 190 GWDISVVRVGESSQTSDRPDNVIITLKRAKGPLVFDLGICLVLITLPTLALFVAIQMITG 249
Query 214 RRQFQPPMTTWYAAMLFAVIPLRNALPDAPPIGFWIDVTVVLWVVVALVTSMVLYILCWW 273
RR+FQPP TWYAAMLFAV+PLR LP +PP G WID VV+WV++AL +MV+YI+ W+
Sbjct 250 RRKFQPPFGTWYAAMLFAVVPLRTILPGSPPAGAWIDRAVVIWVLIALAAAMVVYIVAWY 309
>gi|183981066|ref|YP_001849357.1| transmembrane protein [Mycobacterium marinum M]
gi|183174392|gb|ACC39502.1| conserved transmembrane protein [Mycobacterium marinum M]
Length=312
Score = 152 bits (383), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 90/240 (38%), Positives = 122/240 (51%), Gaps = 10/240 (4%)
Query 42 TADGTTVTLHVEQLQTIKGVLVANLAVSPGTELLDSQTQGLKDDLTVTVTSVVTPTKRTW 101
T D T V + E L T+ L + V P ++D + L D +V +
Sbjct 71 TTDDTVVLVRFEALHTVANRLDVKVLVMPDDSMIDHRLNVLTVDTSVRFYPENELGDLQY 130
Query 102 SSGSLPGVFPVPLTISGDPANWPFDHYRSGPITVQLYRGAAHAPE----RVSVTFVDRLP 157
G P + GDP NWPFD Y + I + G + RV VT L
Sbjct 131 PVGKSPAQVATTIEAHGDPGNWPFDRYTTDTIQADVLVGTGENRQYKATRVEVT--GSLE 188
Query 158 GWNVDISGVGDA----NVPAPYRVGLHRSPSSVAFGTVIVGVLIALAGVGLFVAVQTARG 213
GW++ + VGDA + P V R+ + F I VLI L + LFVA+Q
Sbjct 189 GWDISVERVGDASQTSDRPDNVIVTFQRAKGPLVFDLGICLVLITLPTLALFVAIQMITR 248
Query 214 RRQFQPPMTTWYAAMLFAVIPLRNALPDAPPIGFWIDVTVVLWVVVALVTSMVLYILCWW 273
RR+FQPP TWYAAMLFAV+PLRN LP +PP G WID +V+WV++AL T+MV+Y++ W+
Sbjct 249 RRKFQPPFGTWYAAMLFAVVPLRNILPGSPPAGAWIDQAIVIWVLIALATAMVVYVVAWY 308
>gi|118462593|ref|YP_883594.1| hypothetical protein MAV_4459 [Mycobacterium avium 104]
gi|118163880|gb|ABK64777.1| conserved hypothetical protein [Mycobacterium avium 104]
Length=313
Score = 152 bits (383), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 99/276 (36%), Positives = 147/276 (54%), Gaps = 15/276 (5%)
Query 7 VVVGLVLV-IAAYVTVIALYHSTGLGRPHEVAHGRPTADGTTVTLHVEQLQTIKGVLVAN 65
VV+G V V + + V L + G +P ++ T+D T V + +E+L TI L
Sbjct 40 VVLGFVAVYVLSLFGVHLLAKTAGPLKPPDL---NATSD-TVVLVRLEKLDTIANRLTVK 95
Query 66 LAVSPGTELLDSQTQGLKDDLTVTVTSVVTPTKRTWSSGSLPGVFPVPLTISGDPANWPF 125
+ V P + D + L D V + + +G P + G+P NWPF
Sbjct 96 VLVIPEESMFDKRLDVLTTDTAVRMDPPNDLGDLQYPAGKSPAQVATTIEAHGNPNNWPF 155
Query 126 DHYRSGPITVQLYRGAAHA----PERVSVTFVDRLPGWNVDISGVGDANVPAPYR----V 177
D YR+ ++ ++ G A P RV VT L GW+V + VG+A+ + +
Sbjct 156 DSYRTDTMSAEVLVGQGDARHYIPARVEVT--GGLDGWDVSVQRVGEASQESDRADNVII 213
Query 178 GLHRSPSSVAFGTVIVGVLIALAGVGLFVAVQTARGRRQFQPPMTTWYAAMLFAVIPLRN 237
LHRS S++ F I VL AL + L +A+ G+R F PP TW+AA+LFAVIP+RN
Sbjct 214 TLHRSKSTLIFDAGICLVLFALPAMALTIALLMLTGKRGFLPPFVTWFAALLFAVIPIRN 273
Query 238 ALPDAPPIGFWIDVTVVLWVVVALVTSMVLYILCWW 273
LP +PP G W+D +VLWV++ALVTSMVL+++ W+
Sbjct 274 FLPGSPPAGAWVDQALVLWVLIALVTSMVLFLITWY 309
>gi|298524204|ref|ZP_07011613.1| conserved transmembrane protein [Mycobacterium tuberculosis 94_M4241A]
gi|298493998|gb|EFI29292.1| conserved transmembrane protein [Mycobacterium tuberculosis 94_M4241A]
Length=313
Score = 152 bits (383), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 90/240 (38%), Positives = 126/240 (53%), Gaps = 10/240 (4%)
Query 42 TADGTTVTLHVEQLQTIKGVLVANLAVSPGTELLDSQTQGLKDDLTVTVTSVVTPTKRTW 101
T D T V + E+L T+ L + V P ++D + Q L D +V + +
Sbjct 72 TTDDTVVLIRFEELHTVANRLDVKVLVLPDDSMIDHRLQVLTTDTSVRLYPENELGDLQY 131
Query 102 SSGSLPGVFPVPLTISGDPANWPFDHYRSGPITVQLYRGAA----HAPERVSVTFVDRLP 157
G LP + G+P WPFD Y + + + GA + P RV VT L
Sbjct 132 PVGKLPAQVATTIEAHGNPGAWPFDTYTTDTVQADVLVGAGDNRQYVPARVEVT--GSLE 189
Query 158 GWNVDISGVGDA----NVPAPYRVGLHRSPSSVAFGTVIVGVLIALAGVGLFVAVQTARG 213
GW++ VG++ + P + L R+ + F I VLI L + LFVA+Q G
Sbjct 190 GWDISAVRVGESSQTSDRPDNVIITLKRAKGPLVFDLGICLVLITLPTLALFVAIQMITG 249
Query 214 RRQFQPPMTTWYAAMLFAVIPLRNALPDAPPIGFWIDVTVVLWVVVALVTSMVLYILCWW 273
RR+FQPP TWYAAMLFAV+PLR LP +PP G WID VV+WV++AL +MV+YI+ W+
Sbjct 250 RRKFQPPFGTWYAAMLFAVVPLRTILPGSPPAGAWIDRAVVIWVLIALAAAMVVYIVAWY 309
>gi|254776895|ref|ZP_05218411.1| hypothetical protein MaviaA2_19821 [Mycobacterium avium subsp.
avium ATCC 25291]
Length=301
Score = 152 bits (383), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 99/276 (36%), Positives = 147/276 (54%), Gaps = 15/276 (5%)
Query 7 VVVGLVLV-IAAYVTVIALYHSTGLGRPHEVAHGRPTADGTTVTLHVEQLQTIKGVLVAN 65
VV+G V V + + V L + G +P ++ T+D T V + +E+L TI L
Sbjct 28 VVLGFVAVYVLSLFGVHLLAKTAGPLKPPDL---NATSD-TVVLVRLEKLDTIANRLTVK 83
Query 66 LAVSPGTELLDSQTQGLKDDLTVTVTSVVTPTKRTWSSGSLPGVFPVPLTISGDPANWPF 125
+ V P + D + L D V + + +G P + G+P NWPF
Sbjct 84 VLVIPEESMFDKRLDVLTTDTAVRMDPPNDLGDLQYPAGKSPAQVATTIEAHGNPNNWPF 143
Query 126 DHYRSGPITVQLYRGAAHA----PERVSVTFVDRLPGWNVDISGVGDANVPAPYR----V 177
D YR+ ++ ++ G A P RV VT L GW+V + VG+A+ + +
Sbjct 144 DSYRTDTMSAEVLVGQGDARHYIPARVEVT--GGLDGWDVSVQRVGEASQESDRADNVII 201
Query 178 GLHRSPSSVAFGTVIVGVLIALAGVGLFVAVQTARGRRQFQPPMTTWYAAMLFAVIPLRN 237
LHRS S++ F I VL AL + L +A+ G+R F PP TW+AA+LFAVIP+RN
Sbjct 202 TLHRSKSTLIFDAGICLVLFALPAMALTIALLMLTGKRGFLPPFVTWFAALLFAVIPIRN 261
Query 238 ALPDAPPIGFWIDVTVVLWVVVALVTSMVLYILCWW 273
LP +PP G W+D +VLWV++ALVTSMVL+++ W+
Sbjct 262 FLPGSPPAGAWVDQALVLWVLIALVTSMVLFLITWY 297
>gi|15607853|ref|NP_215227.1| transmembrane protein [Mycobacterium tuberculosis H37Rv]
gi|15840120|ref|NP_335157.1| hypothetical protein MT0740 [Mycobacterium tuberculosis CDC1551]
gi|31791899|ref|NP_854392.1| transmembrane protein [Mycobacterium bovis AF2122/97]
70 more sequence titles
Length=313
Score = 152 bits (383), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 90/240 (38%), Positives = 126/240 (53%), Gaps = 10/240 (4%)
Query 42 TADGTTVTLHVEQLQTIKGVLVANLAVSPGTELLDSQTQGLKDDLTVTVTSVVTPTKRTW 101
T D T V + E+L T+ L + V P ++D + Q L D +V + +
Sbjct 72 TTDDTVVLIRFEELHTVANRLDVKVLVLPDDSMIDHRLQVLTTDTSVRLYPENELGDLQY 131
Query 102 SSGSLPGVFPVPLTISGDPANWPFDHYRSGPITVQLYRGAA----HAPERVSVTFVDRLP 157
G LP + G+P WPFD Y + + + GA + P RV VT L
Sbjct 132 PVGKLPAQVATTIEAHGNPGAWPFDTYTTDTVQADVLVGAGDNRQYVPARVEVT--GSLE 189
Query 158 GWNVDISGVGDA----NVPAPYRVGLHRSPSSVAFGTVIVGVLIALAGVGLFVAVQTARG 213
GW++ VG++ + P + L R+ + F I VLI L + LFVA+Q G
Sbjct 190 GWDISAVRVGESSQTSDRPDNVIITLKRAKGPLVFDLGICLVLITLPTLALFVAIQMITG 249
Query 214 RRQFQPPMTTWYAAMLFAVIPLRNALPDAPPIGFWIDVTVVLWVVVALVTSMVLYILCWW 273
RR+FQPP TWYAAMLFAV+PLR LP +PP G WID VV+WV++AL +MV+YI+ W+
Sbjct 250 RRKFQPPFGTWYAAMLFAVVPLRTILPGSPPAGAWIDRAVVIWVLIALAAAMVVYIVAWY 309
>gi|306806537|ref|ZP_07443205.1| conserved membrane protein [Mycobacterium tuberculosis SUMu007]
gi|308347014|gb|EFP35865.1| conserved membrane protein [Mycobacterium tuberculosis SUMu007]
Length=313
Score = 151 bits (382), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 90/240 (38%), Positives = 125/240 (53%), Gaps = 10/240 (4%)
Query 42 TADGTTVTLHVEQLQTIKGVLVANLAVSPGTELLDSQTQGLKDDLTVTVTSVVTPTKRTW 101
T D T V + E+L T+ L + V P ++D + Q L D +V + +
Sbjct 72 TTDDTVVLIRFEELHTVANRLDVKVLVLPDDSMIDHRLQVLTTDTSVRLYPENELGDLQY 131
Query 102 SSGSLPGVFPVPLTISGDPANWPFDHYRSGPITVQLYRGAA----HAPERVSVTFVDRLP 157
G LP + G+P WPFD Y + + + GA + P RV VT L
Sbjct 132 PVGKLPAQVATTIEAHGNPGAWPFDTYTTDTVQADVLVGAGDNRQYVPARVEVT--GSLE 189
Query 158 GWNVDISGVGDA----NVPAPYRVGLHRSPSSVAFGTVIVGVLIALAGVGLFVAVQTARG 213
GW++ VG++ + P + L R+ + F I VLI L + LFVA+Q G
Sbjct 190 GWDISAVRVGESSQTSDRPDNVIITLKRAKGPLVFDLGICLVLITLPTLALFVAIQMITG 249
Query 214 RRQFQPPMTTWYAAMLFAVIPLRNALPDAPPIGFWIDVTVVLWVVVALVTSMVLYILCWW 273
RR+FQPP TWYAAMLFAV+PLR LP +PP G WID VV+WV++AL +MV+YI W+
Sbjct 250 RRKFQPPFGTWYAAMLFAVVPLRTILPGSPPAGAWIDRAVVIWVLIALAAAMVVYIFAWY 309
>gi|118616582|ref|YP_904914.1| transmembrane protein [Mycobacterium ulcerans Agy99]
gi|118568692|gb|ABL03443.1| conserved transmembrane protein [Mycobacterium ulcerans Agy99]
Length=312
Score = 151 bits (381), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 89/240 (38%), Positives = 122/240 (51%), Gaps = 10/240 (4%)
Query 42 TADGTTVTLHVEQLQTIKGVLVANLAVSPGTELLDSQTQGLKDDLTVTVTSVVTPTKRTW 101
T D T V + E L T+ L + V P ++D + L D +V +
Sbjct 71 TTDDTVVLVRFEALHTVANRLDVKVLVMPDDSMIDHRLNVLTVDTSVRFYPENELGDLQY 130
Query 102 SSGSLPGVFPVPLTISGDPANWPFDHYRSGPITVQLYRGAAHAPE----RVSVTFVDRLP 157
G P + GDP NWPFD Y + I + G + RV VT L
Sbjct 131 PVGKSPAQVATTIEAHGDPGNWPFDRYTTDTIQADVLVGTGENRQYKDTRVEVT--GSLE 188
Query 158 GWNVDISGVGDA----NVPAPYRVGLHRSPSSVAFGTVIVGVLIALAGVGLFVAVQTARG 213
GW++ + VGDA + P V R+ + F I VLI L + LFVA+Q
Sbjct 189 GWDISVERVGDASQTSDRPDNVIVTFQRAKGPLVFDLGICLVLITLPTLALFVAIQMITR 248
Query 214 RRQFQPPMTTWYAAMLFAVIPLRNALPDAPPIGFWIDVTVVLWVVVALVTSMVLYILCWW 273
RR+FQPP TWYAAMLFAV+PLRN LP +PP G WID +V+WV++AL T+M++Y++ W+
Sbjct 249 RRKFQPPFGTWYAAMLFAVVPLRNILPGSPPAGAWIDQAIVIWVLIALATAMMVYVVAWY 308
>gi|342861804|ref|ZP_08718449.1| hypothetical protein MCOL_23060 [Mycobacterium colombiense CECT
3035]
gi|342130621|gb|EGT83925.1| hypothetical protein MCOL_23060 [Mycobacterium colombiense CECT
3035]
Length=314
Score = 149 bits (376), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 88/236 (38%), Positives = 124/236 (53%), Gaps = 10/236 (4%)
Query 46 TTVTLHVEQLQTIKGVLVANLAVSPGTELLDSQTQGLKDDLTVTVTSVVTPTKRTWSSGS 105
T V + +E+L T+ L + V P + D + LK D V + + +G
Sbjct 77 TVVLVRLEKLDTVANRLTVKVLVIPEESMFDKRLDVLKTDTAVRMDPPNDLGDLQYPAGK 136
Query 106 LPGVFPVPLTISGDPANWPFDHYRSGPITVQLYRGAAHA----PERVSVTFVDRLPGWNV 161
P + G+P NWPFD Y + ++ + G A P RV VT L GW+V
Sbjct 137 SPAQVATTIEARGNPNNWPFDSYSTDTLSADVLVGQGDARRYIPARVEVT--GGLDGWDV 194
Query 162 DISGVGDANVPAPYR----VGLHRSPSSVAFGTVIVGVLIALAGVGLFVAVQTARGRRQF 217
+ VG+A+ + + LHR+ + F I VL AL + V +Q A GRR+F
Sbjct 195 GVQRVGEASQDSDRADNVIITLHRAKGPLIFDLGICLVLFALPALAFAVVIQVALGRRKF 254
Query 218 QPPMTTWYAAMLFAVIPLRNALPDAPPIGFWIDVTVVLWVVVALVTSMVLYILCWW 273
PP TW+AA+LFAVIP+RN LP APP G WID +VLWV++ALV +M LY+L W+
Sbjct 255 VPPFVTWFAALLFAVIPIRNFLPGAPPPGAWIDQVLVLWVLIALVAAMALYMLTWY 310
>gi|336460656|gb|EGO39547.1| hypothetical protein MAPs_38580 [Mycobacterium avium subsp. paratuberculosis
S397]
Length=313
Score = 149 bits (375), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 97/276 (36%), Positives = 146/276 (53%), Gaps = 15/276 (5%)
Query 7 VVVGLVLV-IAAYVTVIALYHSTGLGRPHEVAHGRPTADGTTVTLHVEQLQTIKGVLVAN 65
VV+G V V + + V L + G +P ++ T+D T V + +E+L TI L
Sbjct 40 VVLGFVAVYVLSLFGVHLLAKTAGPLKPPDL---NATSD-TVVLVRLEKLDTIANRLTVK 95
Query 66 LAVSPGTELLDSQTQGLKDDLTVTVTSVVTPTKRTWSSGSLPGVFPVPLTISGDPANWPF 125
+ V P + D + L D V + + +G P + G+P NWPF
Sbjct 96 VLVIPEESMFDKRLDVLTTDTAVRMDPPNDLGDLQYPAGKSPAQVATTIEAHGNPNNWPF 155
Query 126 DHYRSGPITVQLYRGAA----HAPERVSVTFVDRLPGWNVDISGVGDANVPAPYR----V 177
D YR+ ++ ++ G + P RV VT L GW+V + VG+A+ + +
Sbjct 156 DSYRTDTMSAEVLVGQGDTRHYIPARVEVT--GGLDGWDVSVQRVGEASQESDRADNVII 213
Query 178 GLHRSPSSVAFGTVIVGVLIALAGVGLFVAVQTARGRRQFQPPMTTWYAAMLFAVIPLRN 237
LHRS S++ F I VL AL + L +A+ G+R F PP TW+AA+LFAVIP+RN
Sbjct 214 TLHRSKSTLIFDAGICLVLFALPAMALTIALLMLTGKRGFLPPFVTWFAALLFAVIPIRN 273
Query 238 ALPDAPPIGFWIDVTVVLWVVVALVTSMVLYILCWW 273
LP +PP G W+D +VLWV++ALV SMVL+++ W+
Sbjct 274 FLPGSPPAGAWVDQALVLWVLIALVASMVLFLITWY 309
>gi|312140169|ref|YP_004007505.1| integral membrane protein [Rhodococcus equi 103S]
gi|311889508|emb|CBH48825.1| putative integral membrane protein [Rhodococcus equi 103S]
Length=393
Score = 145 bits (367), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 92/268 (35%), Positives = 138/268 (52%), Gaps = 12/268 (4%)
Query 13 LVIAAYVTVIALYHSTGLGRPH--EVAHGRPTADGTTVTLHVEQLQTIKGVLVANLAVSP 70
LV+A Y++ + +Y ++ EV P AD V + + +++ + ++V+P
Sbjct 21 LVVALYLSSLGVYAASDDSDAGWTEVT---PDADEVLVIVSLIEVRPSTSRVDVEVSVAP 77
Query 71 GTELLDSQTQGLKDDLTVTVTSVVTPTKRTWSSGSLPGVFPVPLTISGDPANWPFDHYRS 130
G LDS L ++TV V+ + TK G+ F + + G WPFD +
Sbjct 78 GASFLDSGGADLAREMTVLVSPSIARTKLVLPQGTSVTTFDTQVLLDGQAGRWPFDRFVV 137
Query 131 GPITVQLYRGAAHA----PERVSVTFVDRLPGWNV-DISGVGDANVPAPYRVGLHRSPSS 185
P+ V Y G+ P RV V GW V D D RV +HRS
Sbjct 138 DPLVVTAYTGSGSDVQTHPTRVLVD--GEAEGWTVGDDVLSADGQDVQEVRVEVHRSGGI 195
Query 186 VAFGTVIVGVLIALAGVGLFVAVQTARGRRQFQPPMTTWYAAMLFAVIPLRNALPDAPPI 245
+ + +++ +++ LA + FV++QTAR RR M W AAM+FAVIP+RN LP APPI
Sbjct 196 LVYSALLLAMMVILAALAAFVSIQTARRRRVVHTDMLGWMAAMVFAVIPMRNILPGAPPI 255
Query 246 GFWIDVTVVLWVVVALVTSMVLYILCWW 273
G W+D+TV +WV+V LV S+ LY+ CWW
Sbjct 256 GAWVDITVTVWVIVTLVVSLALYVYCWW 283
>gi|41410271|ref|NP_963107.1| hypothetical protein MAP4173 [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|41399105|gb|AAS06723.1| hypothetical protein MAP_4173 [Mycobacterium avium subsp. paratuberculosis
K-10]
Length=313
Score = 145 bits (366), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 96/276 (35%), Positives = 145/276 (53%), Gaps = 15/276 (5%)
Query 7 VVVGLVLV-IAAYVTVIALYHSTGLGRPHEVAHGRPTADGTTVTLHVEQLQTIKGVLVAN 65
VV+G V V + + V L + G +P ++ T+D T V + +E+L TI L
Sbjct 40 VVLGFVAVYVLSLFGVHLLAKTAGPLKPPDL---NATSD-TVVLVRLEKLDTIANRLTVK 95
Query 66 LAVSPGTELLDSQTQGLKDDLTVTVTSVVTPTKRTWSSGSLPGVFPVPLTISGDPANWPF 125
+ V P + D + L D V + + +G P + G+P NWPF
Sbjct 96 VLVIPEESMFDKRLDVLTTDTAVRMDPPNDLGDLQYPAGKSPAQVATTIEAHGNPNNWPF 155
Query 126 DHYRSGPITVQLYRGAA----HAPERVSVTFVDRLPGWNVDISGVGDANVPAPYR----V 177
YR+ ++ ++ G + P RV VT L GW+V + VG+A+ + +
Sbjct 156 YSYRTDTMSAEVLVGQGDTRHYIPARVEVT--GGLDGWDVSVQRVGEASQESDRADNVII 213
Query 178 GLHRSPSSVAFGTVIVGVLIALAGVGLFVAVQTARGRRQFQPPMTTWYAAMLFAVIPLRN 237
LHRS S++ F I VL AL + L +A+ G+R F PP TW+AA+LFAVIP+RN
Sbjct 214 TLHRSKSTLIFDAGICLVLFALPAMALTIALLMLTGKRGFLPPFVTWFAALLFAVIPIRN 273
Query 238 ALPDAPPIGFWIDVTVVLWVVVALVTSMVLYILCWW 273
LP +PP G W+D +VLWV++ALV SMVL+++ W+
Sbjct 274 FLPGSPPAGAWVDQALVLWVLIALVASMVLFLITWY 309
>gi|315444698|ref|YP_004077577.1| hypothetical protein Mspyr1_31250 [Mycobacterium sp. Spyr1]
gi|315263001|gb|ADT99742.1| hypothetical protein Mspyr1_31250 [Mycobacterium sp. Spyr1]
Length=323
Score = 142 bits (359), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 103/284 (37%), Positives = 151/284 (54%), Gaps = 17/284 (5%)
Query 7 VVVGLVLVIAAYVTVIALYHSTGLG-RPHEVAHGRPTADGTTVTLHVEQLQTIKGVLVAN 65
V+ L +VIA YV + Y +P E + T V L + +++T++ L +
Sbjct 26 VLTTLAVVIAVYVGALVGYRLLEQPPKPFEFTESS-VVEETAVILRLGKMETVENKLTVD 84
Query 66 LAVSPGTELLDSQTQGLKDDLTVTVTSVVTPTKRTWSSGSLP-GVFPVPLTISGDPANWP 124
+ V P +LLD+ + + + V ++S + L V T GDP +WP
Sbjct 85 VLVHPDRDLLDAGPE-VAANPVVRLSSWTRDGELIHMHDDLKSNASTVEFTAVGDPDHWP 143
Query 125 FDHYRSGPITVQLYRGAAHAPERVSVTFV----DRLPGWNVDIS-GVGDAN---VPA-PY 175
D+Y S I V+++ G P+R SV V + GW+VD GV DA VP+ +
Sbjct 144 LDNYISNTIGVEVFFG--DGPDRRSVPAVIVVAGAINGWDVDSDMGVLDAPWGPVPSVSF 201
Query 176 RVGLHRSPSSVAFGTVIVGVLIALAGVGLFVAVQTARGRRQFQPPMTTWYAAMLFAVIPL 235
+ R +V FG ++V L+ L G LFVA++ RR+F PP TWYAAMLFAV+PL
Sbjct 202 HLERTRGAHAVDFGILLV--LMVLPGTALFVAIEMLLNRRKFLPPFITWYAAMLFAVVPL 259
Query 236 RNALPDAPPIGFWIDVTVVLWVVVALVTSMVLYILCWWWHLKPD 279
RN LP APP G WIDV V+LWV++AL +MV+Y+ WW + +
Sbjct 260 RNILPGAPPTGAWIDVAVILWVLLALSAAMVVYLAAWWRQTREE 303
>gi|145224366|ref|YP_001135044.1| hypothetical protein Mflv_3784 [Mycobacterium gilvum PYR-GCK]
gi|145216852|gb|ABP46256.1| putative conserved transmembrane protein [Mycobacterium gilvum
PYR-GCK]
Length=324
Score = 137 bits (346), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 104/278 (38%), Positives = 146/278 (53%), Gaps = 17/278 (6%)
Query 7 VVVGLVLVIAAYVTVIALYHSTGLG-RPHEVAHGRPTADGTTVTLHVEQLQTIKGVLVAN 65
V+ L +VIA YV + Y +P E + T V L + +++T++ L +
Sbjct 26 VLTTLAVVIAVYVGALVGYRLLETPPQPFEFTESSVIGE-TAVILRLGKMETVENKLTLD 84
Query 66 LAVSPGTELLDSQTQGLKDDLTVTVTSVVTPTKRTWSSGSLP-GVFPVPLTISGDPANWP 124
+ V P +LL S + + + V ++S L V LT GDP +WP
Sbjct 85 VLVHPDRDLLASGPEAAANPV-VRLSSWTQDGDLIHMHDDLKSNASTVELTAVGDPDHWP 143
Query 125 FDHYRSGPITVQLYRGAAHAPERVSVTFV----DRLPGWNVDIS-GVGDAN---VPA-PY 175
D Y S I V+++ G P R SV V + GW+VD GV DA VP+ +
Sbjct 144 LDTYVSNTIGVEVFYG--EGPNRRSVPAVIVVAGAINGWDVDSDMGVLDAPWGPVPSVSF 201
Query 176 RVGLHRSPSSVAFGTVIVGVLIALAGVGLFVAVQTARGRRQFQPPMTTWYAAMLFAVIPL 235
+ R +V FG I+ VL+ L G LFVA++ RR+F PP TWYAAMLFAV+PL
Sbjct 202 HLERTRGAHAVDFG--ILLVLMVLPGTALFVAIEMLLNRRKFLPPFITWYAAMLFAVVPL 259
Query 236 RNALPDAPPIGFWIDVTVVLWVVVALVTSMVLYILCWW 273
RN LP APP G WIDV V+LWV++AL +MV+++ WW
Sbjct 260 RNILPGAPPTGAWIDVAVILWVLLALSAAMVVFLAAWW 297
>gi|111017104|ref|YP_700076.1| hypothetical protein RHA1_ro00082 [Rhodococcus jostii RHA1]
gi|110816634|gb|ABG91918.1| conserved hypothetical protein [Rhodococcus jostii RHA1]
Length=303
Score = 132 bits (333), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 81/270 (30%), Positives = 132/270 (49%), Gaps = 12/270 (4%)
Query 11 LVLVIAAYVTVIALYHSTGLGR-PHEVAHGRPTADGTTVTLHVEQLQTIKGVLVANLAVS 69
L L+ AA +TV L TG P E+ +D V + + LQ + A + ++
Sbjct 19 LTLIYAASLTVYGLSSRTGDDDGPFEIG-----SDEVVVLVTAKSLQPTTDRVQAEVTIA 73
Query 70 PGTELLDSQTQGLKDDLTVTVTSVVTPTKRTWSSGSLPGVFPVPLTISGDPANWPFDHYR 129
G + L + L D+T+ + + + + +G+ F +G+ A WPFD +
Sbjct 74 VGEDFLHANGDTLNRDITLLLVPSTSHEEIVFRAGASATTFDTEFIATGNAAYWPFDRFE 133
Query 130 SGPITVQLYRGAAHAPERV--SVTFVDRLPGWNVDISGVGDANVPAPYRVG----LHRSP 183
P+ V+ Y+G E V ++ R+ GW V + G R+
Sbjct 134 VNPMVVEAYQGLGADRELVPTALLLEGRVDGWKARAEEVAVDTDLSRNGTGAALMFARTG 193
Query 184 SSVAFGTVIVGVLIALAGVGLFVAVQTARGRRQFQPPMTTWYAAMLFAVIPLRNALPDAP 243
++ + +++ ++ LAG+ FVA+QT R +R M W AAMLFAV+PLR LP +P
Sbjct 194 GNLIYAGILLLMMTILAGLAAFVALQTFRRKRAVNTDMLGWMAAMLFAVVPLRGILPGSP 253
Query 244 PIGFWIDVTVVLWVVVALVTSMVLYILCWW 273
PIG W+D+ + +WVV LV S+ L++ CWW
Sbjct 254 PIGSWVDIALTVWVVSTLVASLALFVFCWW 283
>gi|226359618|ref|YP_002777396.1| hypothetical protein ROP_02040 [Rhodococcus opacus B4]
gi|226238103|dbj|BAH48451.1| hypothetical membrane protein [Rhodococcus opacus B4]
Length=289
Score = 127 bits (319), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 71/236 (31%), Positives = 116/236 (50%), Gaps = 6/236 (2%)
Query 44 DGTTVTLHVEQLQTIKGVLVANLAVSPGTELLDSQTQGLKDDLTVTVTSVVTPTKRTWSS 103
D V + + LQ + A + ++ G E L + L D+T+ + + + + +
Sbjct 45 DEVVVLVTAKSLQPTTDRVQAEVTIAVGEEYLHANGDTLNRDITLLLFPSTSHEEIVFRA 104
Query 104 GSLPGVFPVPLTISGDPANWPFDHYRSGPITVQLYRGAAHAPERVSVTFV--DRLPGWNV 161
G+ P F +G+ A WPFD + P+ V+ Y GA + + R+ GW
Sbjct 105 GAAPTTFDTEFIATGNAAYWPFDRFEVNPMVVEAYEGAGADRALLPTGLLVDGRVDGWKA 164
Query 162 DISGVGDANVPAPYRVG----LHRSPSSVAFGTVIVGVLIALAGVGLFVAVQTARGRRQF 217
V + G R+ ++ + +++ ++ LAG+ FVA+QT R +R
Sbjct 165 RADAVAVDTDLSRNGTGAALLFARTGGNLIYAGILLLMMTILAGLAAFVALQTFRRKRAV 224
Query 218 QPPMTTWYAAMLFAVIPLRNALPDAPPIGFWIDVTVVLWVVVALVTSMVLYILCWW 273
M W AAMLFAV+PLR LP +PPIG W+D+ + +WVV LV S+ L++ CWW
Sbjct 225 NTDMLGWMAAMLFAVVPLRGILPGSPPIGSWVDIALTVWVVSTLVASLALFVFCWW 280
>gi|323359228|ref|YP_004225624.1| hypothetical protein MTES_2780 [Microbacterium testaceum StLB037]
gi|323275599|dbj|BAJ75744.1| hypothetical protein MTES_2780 [Microbacterium testaceum StLB037]
Length=273
Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 86/272 (32%), Positives = 129/272 (48%), Gaps = 17/272 (6%)
Query 11 LVLVIAAYVTVIALYHSTGLG----RPHEVAHGRPTADGTTVTLHVEQLQTIKGVLVANL 66
+V +IA YVTV+ LY S G G EV+ G ++ L E++ L +L
Sbjct 5 VVAIIALYVTVVVLYAS-GSGVVSRGDDEVSPG-----AVSLVLTPEKMDAATSRLTVSL 58
Query 67 AVSPGTELLDSQTQGLKDD--LTVTVTSVVTPTKRTWSSGSLPGVFPVPLTISGDPANWP 124
P T G+ D V V++V T + L V + G WP
Sbjct 59 L--PKQADGGEYTNGVTIDKPFAVLVSAVAGSTAVHYQPSELVAPTEVSFVMDGAIEQWP 116
Query 125 FDHYRSGPITVQLYRGA--AHAPERVSVTFVDR-LPGWNVDISGVGDANVPAPYRVGLHR 181
FD Y V A P +VT R + GW++ ++ + + R
Sbjct 117 FDRYHVTSFVVAAVDDADGESVPLPTAVTVSGRGVTGWDITMAERDAGDGLLAVDISASR 176
Query 182 SPSSVAFGTVIVGVLIALAGVGLFVAVQTARGRRQFQPPMTTWYAAMLFAVIPLRNALPD 241
S ++VAFG V++ +++ + + L VA+ RGRR+ + W AM+FA IPLRN LP
Sbjct 177 SGATVAFGIVLLTLMVIIPTLVLIVAIAVLRGRRKVEVTTLGWMGAMVFATIPLRNFLPG 236
Query 242 APPIGFWIDVTVVLWVVVALVTSMVLYILCWW 273
+PPIG WID +VLWV+ ALV +V++++ WW
Sbjct 237 SPPIGSWIDYLIVLWVIAALVAGLVIFVIAWW 268
>gi|217977911|ref|YP_002362058.1| hypothetical protein Msil_1750 [Methylocella silvestris BL2]
gi|217503287|gb|ACK50696.1| hypothetical protein Msil_1750 [Methylocella silvestris BL2]
Length=284
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/280 (29%), Positives = 124/280 (45%), Gaps = 15/280 (5%)
Query 3 RILRVVVGLVLVIAAYVTVIALYHSTGLGRPHEVAHGRPTADG-TTVTLHVEQLQTIKGV 61
R+L + + LV + AAY+ A VA T + L Q+ ++
Sbjct 3 RVLAISLALVAIFAAYMAFFAGLCLQPETSETAVAESLATKTAPLNIFLEATQVDPVRQA 62
Query 62 LVANLAVSPGTELLDSQTQGLKD-DLTVTVTSVVTPTKRTWSSGSLPGVFPVPLTISGDP 120
+ +L S + L D D+TV + +GS + ++G
Sbjct 63 ISISLDFSTEAGPRGAHYPALPDRDITVHASDGDYVLDIVLGAGSAAPTTIAQIGVNGSI 122
Query 121 ANWPFDHYRSGPITVQLYRGAAHAPERVSV--TFVDRLPGWNVDISGVGDANVPAPYRVG 178
+ +PFD YR G +T+ + G ER+ + T +RL GW +DI A PAP VG
Sbjct 123 SAYPFDEYR-GEVTIAAWEGKKPEGERIPIRLTLWERLAGWEIDIL----ARAPAPGEVG 177
Query 179 L------HRSPSSVAFGTVIVGVLIALAGVGLFVAVQTARGRRQFQPPMTTWYAAMLFAV 232
L R + + F +++ V+ +A GL + V G R+ + +T AAMLFAV
Sbjct 178 LGLEIRAKRPLAQIYFASLVYAVMAVIALCGLTIGVLAIAGLRRLEAALTGALAAMLFAV 237
Query 233 IPLRNALPDAPPIGFWIDVTVVLWVVVALVTSMVLYILCW 272
LRN +P APP+G D V L +AL+ + +I+ W
Sbjct 238 PALRNVMPGAPPLGVKADAFVFLSAQMALMIGLAFFIIAW 277
>gi|217976399|ref|YP_002360546.1| hypothetical protein Msil_0203 [Methylocella silvestris BL2]
gi|217501775|gb|ACK49184.1| hypothetical protein Msil_0203 [Methylocella silvestris BL2]
Length=295
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/217 (32%), Positives = 98/217 (46%), Gaps = 18/217 (8%)
Query 68 VSPGTELLDSQTQGLKDDLTVTVTSVVTPTKRTWSSGSLPGVFPVPLTISGDP-----AN 122
V+PG + + DL V V S ++ + + P F LTI D A
Sbjct 78 VAPGRGMPGKRPNSADRDLNVIVRSGDAVEQQVFRAHE-PMTF---LTIGADLNQGSIAR 133
Query 123 WPFDHYRSGPITVQLYRGAAHAPER-----VSVTFVDRLPGWNVDISGV--GDANVPAPY 175
+PFD Y + VQ GA PE + VT + L G+ + S GDA
Sbjct 134 YPFDRYVID-LRVQALEGAEATPEHEQAIALDVTVWEGLLGYQIRSSMAPGGDAG-DLRL 191
Query 176 RVGLHRSPSSVAFGTVIVGVLIALAGVGLFVAVQTARGRRQFQPPMTTWYAAMLFAVIPL 235
R L R+ + V F G +I LA L ++ G R+ + AA++FA+ L
Sbjct 192 RFDLRRADAHVFFALATYGAMIVLACSSLLISFLVFLGYRKPEAAPLGALAALVFALPAL 251
Query 236 RNALPDAPPIGFWIDVTVVLWVVVALVTSMVLYILCW 272
RNALP APP+G W DV V LW +A V + L+++ W
Sbjct 252 RNALPLAPPLGVWADVLVFLWAELAAVLGLALFVVAW 288
>gi|258652429|ref|YP_003201585.1| hypothetical protein Namu_2219 [Nakamurella multipartita DSM
44233]
gi|258555654|gb|ACV78596.1| hypothetical protein Namu_2219 [Nakamurella multipartita DSM
44233]
Length=309
Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 67/212 (32%), Positives = 94/212 (45%), Gaps = 8/212 (3%)
Query 40 RPTADGTTVTLHVEQLQTIKGVLVANLAVSPGTELLDSQTQGLKDDLTVTVTSVVTPTKR 99
RP V L + G + ++A+ P LL S + +TV V
Sbjct 71 RPDGG-VAVILTARTITAAAGTMRVDVAIDPDPSLLGSDGYPSR-PITVAVDPTEEDADL 128
Query 100 TWSSGSLPGVFPVPLTISGDPANWPFDHYRSGPITVQLYRG-AAHAPERVSVTFVD-RLP 157
+ + P + + GD +WPFD Y +G +T + G A A SV +D +
Sbjct 129 VFEADRRPQARQLTVLFDGDIQDWPFDRY-TGSLTATVTVGQGADAVLVDSVIELDGSVQ 187
Query 158 GWNVDISGVGDANVPAPY-RVGLHRSPSSVAFGTVIVGVLIALAGVGLFVAVQTARGRRQ 216
GW D++ D P V HRS + + FG +V VLI L V V+ R RR
Sbjct 188 GW--DLAESADPQAPDLLVDVSFHRSSAIMLFGLTLVLVLILLPVACWIVQVRLYRDRRL 245
Query 217 FQPPMTTWYAAMLFAVIPLRNALPDAPPIGFW 248
F+ M W AA+LFA IP+RN P +PP G W
Sbjct 246 FEAGMLGWTAALLFATIPIRNFFPGSPPPGSW 277
>gi|256394869|ref|YP_003116433.1| hypothetical protein Caci_5734 [Catenulispora acidiphila DSM
44928]
gi|256361095|gb|ACU74592.1| hypothetical protein Caci_5734 [Catenulispora acidiphila DSM
44928]
Length=276
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 79/279 (29%), Positives = 115/279 (42%), Gaps = 32/279 (11%)
Query 8 VVGLVLVIA-AYVTVIALYHSTGLGRPHEVAHGRPTADGTTVTLHVEQLQTIKGVLVANL 66
+VG VL++A A + + L H GR + G T V V+ L TI N
Sbjct 1 MVGAVLIVALATLAGVYLSHLDRGGRHYGFGAG-----ATQVPDRVDVLATI------NR 49
Query 67 AVSPGTE-----LLDSQTQGLKDDLTVTVTSVVTPTKRTWSSGSLPGVFPVPLTI----- 116
+P E + + +DD V VT + + SSG L FP I
Sbjct 50 VDAPRNEASVRVFVSVEGAYAEDDTGVYPKQDVTISTSSLSSGEL--TFPAGKRIVSQDV 107
Query 117 -----SGDPANWPFDHYRSGPITVQLYRGAAHAPERVSVTFVDRLPGWNVDISGVGDANV 171
GD A++PFD Y + T++ A P +V +D PG+ + VG +
Sbjct 108 RMDLPGGDIADYPFDRYST---TLRFAADVAGKPVPATVAIIDSDPGFVTRETPVGGEPL 164
Query 172 PAPYRVGLHRSPSSVAFGTVIVGVLIALAGVGLFVAVQTARGRRQFQPPMTTWYAAMLFA 231
+ + L R+ + ++ ++ ALA L A+ R P W AA LFA
Sbjct 165 APGFDIQLRRTRGTFTMVWLMYVIMWALALSVLTGALVMGHRRLGMVWPGLGWMAASLFA 224
Query 232 VIPLRNALPDAPPIGFWIDVTVVLWVVVALVTSMVLYIL 270
+ RN P PPIG +D TV LW + SMV +L
Sbjct 225 LAGYRNTAPGQPPIGCLLDYTVFLWAEALVAFSMVYAVL 263
>gi|108743475|dbj|BAE95578.1| hypothetical protein [Streptomyces kanamyceticus]
Length=293
Score = 58.9 bits (141), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 80/286 (28%), Positives = 126/286 (45%), Gaps = 17/286 (5%)
Query 2 GRILRVVVGLVLVIAAYVTVIALYHSTGLGRPHEV----AHGRPTADGTTVTLHVEQLQT 57
GR+L + GLVL A + ++ G H++ G D +T V+++
Sbjct 12 GRLL--IAGLVLCAVAAAVTVGVWLQ--FGERHDLDTRYRAGGDAPDRVDITASVQRVDA 67
Query 58 IKGVLVANLAVSPGTELLDSQTQGLKDDLTVTVTSVVTPTKRTWSSGSLPGVFPVPLTI- 116
L L V+P +L ++ + LT+ TS T+ + S VP+T+
Sbjct 68 AGRELTLRLLVTPRGDLAEAGGVAPAESLTLQ-TSADVRGDLTFPAHSRISTVDVPVTLT 126
Query 117 SGDPANWPFDHYRSGPITVQLYRGAAHAPERVSVTFVDRLPGWNVDISGVGDANVPAPYR 176
+G ++PFD Y + + +G P R+++T D L V+ S +AN A +
Sbjct 127 AGSITDYPFDAYDTD-LEFGAVQGGEAVPVRMTLTNNDALFAATVEAS---EANGAAVFY 182
Query 177 VGLHRSPSSVAFGTVIVGVLIALAGVGLFVAVQTARGRRQFQPPMTTWYAAMLFAVIPLR 236
VG+ RS S + F ++ + ALA L A R+ P W AA LFA+ R
Sbjct 183 VGIGRSTSVLIFAVFMMAAMWALAIAVLIGAWFLLSRRKGLTWPALGWMAATLFALAAFR 242
Query 237 NALPDAPPIGFWIDVTVVLW---VVVALVTSMVLYILCWWWHLKPD 279
N P APPIG +D LW V+ V ++V+ + H PD
Sbjct 243 NTAPGAPPIGSLLDYIAFLWAETVIAFCVITVVVMGMRAESHPSPD 288
>gi|328771431|gb|EGF81471.1| hypothetical protein BATDEDRAFT_87729 [Batrachochytrium dendrobatidis
JAM81]
Length=368
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/211 (26%), Positives = 94/211 (45%), Gaps = 5/211 (2%)
Query 73 ELLDSQTQGLKDDLTVTVTSVVTPTKRTWSSGSLPGVFPVPLTIS-GDPANWPFDHYRSG 131
L D+ T + L V +V + GS+ F + + I G P +PFD Y++
Sbjct 95 SLQDNSTNYAYNRLASDVLLIVGGKQTAMKQGSIIPSFDIAIPIDVGQPNLYPFDKYKTY 154
Query 132 PITVQLYRGAAHAPERVSVT-FVDRLPGWNV--DISGVGDANVPAPYRVGLHRSPSSVAF 188
+ YR + V V + W V +I+ G + + RS ++ F
Sbjct 155 -FDIASYRNSFFNQSVPLVAGIVGAVQSWTVALEIANAGGTSGIIIVDTFIERSWTTKFF 213
Query 189 GTVIVGVLIALAGVGLFVAVQTARGRRQFQPPMTTWYAAMLFAVIPLRNALPDAPPIGFW 248
++V ++ AL+ + + R+ +PP + A++LFA+ LRN+ P AP IG
Sbjct 214 SMIVVIIMWALSLSAFTLTITLWLRDRKVEPPTISITASLLFALPALRNSQPGAPVIGSS 273
Query 249 IDVTVVLWVVVALVTSMVLYILCWWWHLKPD 279
+DV +W +V + S +L I+ + K D
Sbjct 274 VDVAGFMWNMVLVAVSCLLLIINYITKYKRD 304
Lambda K H
0.323 0.138 0.438
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 455254791584
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40