BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv3439c Length=467 Score E Sequences producing significant alignments: (Bits) Value gi|308380701|ref|ZP_07490786.2| conserved alanine and proline ri... 904 0.0 gi|254234035|ref|ZP_04927360.1| conserved hypothetical alanine a... 904 0.0 gi|15610575|ref|NP_217956.1| hypothetical protein Rv3439c [Mycob... 903 0.0 gi|289449143|ref|ZP_06438887.1| conserved alanine and proline ri... 902 0.0 gi|254552543|ref|ZP_05142990.1| hypothetical protein Mtube_19195... 901 0.0 gi|148824649|ref|YP_001289403.1| hypothetical protein TBFG_13476... 901 0.0 gi|308374876|ref|ZP_07437713.2| conserved alanine and proline ri... 876 0.0 gi|308373743|ref|ZP_07433523.2| conserved alanine and proline ri... 856 0.0 gi|340628410|ref|YP_004746862.1| hypothetical protein MCAN_34561... 665 0.0 gi|289555711|ref|ZP_06444921.1| conserved alanine and proline ri... 530 2e-148 gi|298526924|ref|ZP_07014333.1| conserved hypothetical protein [... 510 2e-142 gi|289763620|ref|ZP_06522998.1| conserved alanine and proline ri... 472 5e-131 gi|167966781|ref|ZP_02549058.1| conserved hypothetical alanine a... 412 4e-113 gi|240167803|ref|ZP_04746462.1| hypothetical protein MkanA1_0070... 346 4e-93 gi|118465307|ref|YP_883517.1| hypothetical protein MAV_4382 [Myc... 331 2e-88 gi|296165855|ref|ZP_06848342.1| conserved hypothetical protein [... 321 2e-85 gi|336460688|gb|EGO39578.1| hypothetical protein MAPs_37790 [Myc... 318 1e-84 gi|254776812|ref|ZP_05218328.1| hypothetical protein MaviaA2_193... 316 7e-84 gi|118616643|ref|YP_904975.1| hypothetical protein MUL_0868 [Myc... 315 1e-83 gi|342861886|ref|ZP_08718531.1| hypothetical protein MCOL_23470 ... 311 2e-82 gi|183981130|ref|YP_001849421.1| hypothetical protein MMAR_1110 ... 311 2e-82 gi|254821789|ref|ZP_05226790.1| hypothetical protein MintA_17787... 303 3e-80 gi|289763619|ref|ZP_06522997.1| predicted protein [Mycobacterium... 276 4e-72 gi|298526923|ref|ZP_07014332.1| predicted protein [Mycobacterium... 235 1e-59 gi|41410347|ref|NP_963183.1| hypothetical protein MAP4249 [Mycob... 228 2e-57 gi|333991905|ref|YP_004524519.1| hypothetical protein JDM601_326... 223 5e-56 gi|120402483|ref|YP_952312.1| hypothetical protein Mvan_1474 [My... 186 6e-45 gi|315445874|ref|YP_004078753.1| hypothetical protein Mspyr1_436... 178 1e-42 gi|145225521|ref|YP_001136199.1| hypothetical protein Mflv_4945 ... 176 5e-42 gi|167966888|ref|ZP_02549165.1| conserved alanine and proline ri... 168 2e-39 gi|108798108|ref|YP_638305.1| hypothetical protein Mmcs_1136 [My... 144 3e-32 gi|167966889|ref|ZP_02549166.1| hypothetical protein MtubH3_0202... 131 3e-28 gi|169630825|ref|YP_001704474.1| hypothetical protein MAB_3746c ... 102 1e-19 gi|467105|gb|AAA17287.1| B229_C1_154 [Mycobacterium leprae] 86.3 1e-14 >gi|308380701|ref|ZP_07490786.2| conserved alanine and proline rich protein [Mycobacterium tuberculosis SUMu011] gi|308360690|gb|EFP49541.1| conserved alanine and proline rich protein [Mycobacterium tuberculosis SUMu011] Length=469 Score = 904 bits (2337), Expect = 0.0, Method: Compositional matrix adjust. Identities = 467/467 (100%), Positives = 467/467 (100%), Gaps = 0/467 (0%) Query 1 VADRLNVAERLAEGRPAAEHTQSYVRACHLVGYQHPDLTAYPAQIHDWYGSEDGLDLHAL 60 VADRLNVAERLAEGRPAAEHTQSYVRACHLVGYQHPDLTAYPAQIHDWYGSEDGLDLHAL Sbjct 3 VADRLNVAERLAEGRPAAEHTQSYVRACHLVGYQHPDLTAYPAQIHDWYGSEDGLDLHAL 62 Query 61 DADCAQLRAAASVLMEALRMERSQVAVLAAAWTGSGADAAVHFVQRHCETGNSVVTEVRA 120 DADCAQLRAAASVLMEALRMERSQVAVLAAAWTGSGADAAVHFVQRHCETGNSVVTEVRA Sbjct 63 DADCAQLRAAASVLMEALRMERSQVAVLAAAWTGSGADAAVHFVQRHCETGNSVVTEVRA 122 Query 121 AAQRCESLRDNLWQLVDSKVATAIAIDERALAQRPAWLAAAEALTTEGADRPTAVEVVRQ 180 AAQRCESLRDNLWQLVDSKVATAIAIDERALAQRPAWLAAAEALTTEGADRPTAVEVVRQ Sbjct 123 AAQRCESLRDNLWQLVDSKVATAIAIDERALAQRPAWLAAAEALTTEGADRPTAVEVVRQ 182 Query 181 QIQPYVDDDVRNDWLTTMRSTTAGVAASYDAVTDQLASAPRAHFEIPDDLGPGRQPSPAS 240 QIQPYVDDDVRNDWLTTMRSTTAGVAASYDAVTDQLASAPRAHFEIPDDLGPGRQPSPAS Sbjct 183 QIQPYVDDDVRNDWLTTMRSTTAGVAASYDAVTDQLASAPRAHFEIPDDLGPGRQPSPAS 242 Query 241 VPAQPSATAAITPAAALPPPDPVPAVTSRPVTPSDFGSAPGDGSATPAGVGSAGGFGDAG 300 VPAQPSATAAITPAAALPPPDPVPAVTSRPVTPSDFGSAPGDGSATPAGVGSAGGFGDAG Sbjct 243 VPAQPSATAAITPAAALPPPDPVPAVTSRPVTPSDFGSAPGDGSATPAGVGSAGGFGDAG 302 Query 301 GTGGLGGFAGLAGLANRIVDAVDSLLGSVAEQLGDPLAADNPPGAVDPFAEDAADNADDG 360 GTGGLGGFAGLAGLANRIVDAVDSLLGSVAEQLGDPLAADNPPGAVDPFAEDAADNADDG Sbjct 303 GTGGLGGFAGLAGLANRIVDAVDSLLGSVAEQLGDPLAADNPPGAVDPFAEDAADNADDG 362 Query 361 DDAHPEEADEAAEPKEATEPDEADEVDDADESVPAERAQDVAEEATLPPVAEPPPPAAPP 420 DDAHPEEADEAAEPKEATEPDEADEVDDADESVPAERAQDVAEEATLPPVAEPPPPAAPP Sbjct 363 DDAHPEEADEAAEPKEATEPDEADEVDDADESVPAERAQDVAEEATLPPVAEPPPPAAPP 422 Query 421 VAEPPPPVAAPAPPGAPEPANGPSPEALSEGATPCEIAADELPQAGP 467 VAEPPPPVAAPAPPGAPEPANGPSPEALSEGATPCEIAADELPQAGP Sbjct 423 VAEPPPPVAAPAPPGAPEPANGPSPEALSEGATPCEIAADELPQAGP 469 >gi|254234035|ref|ZP_04927360.1| conserved hypothetical alanine and proline rich protein [Mycobacterium tuberculosis C] gi|294995780|ref|ZP_06801471.1| hypothetical protein Mtub2_15058 [Mycobacterium tuberculosis 210] gi|124599564|gb|EAY58668.1| conserved hypothetical alanine and proline rich protein [Mycobacterium tuberculosis C] Length=476 Score = 904 bits (2336), Expect = 0.0, Method: Compositional matrix adjust. Identities = 467/467 (100%), Positives = 467/467 (100%), Gaps = 0/467 (0%) Query 1 VADRLNVAERLAEGRPAAEHTQSYVRACHLVGYQHPDLTAYPAQIHDWYGSEDGLDLHAL 60 VADRLNVAERLAEGRPAAEHTQSYVRACHLVGYQHPDLTAYPAQIHDWYGSEDGLDLHAL Sbjct 10 VADRLNVAERLAEGRPAAEHTQSYVRACHLVGYQHPDLTAYPAQIHDWYGSEDGLDLHAL 69 Query 61 DADCAQLRAAASVLMEALRMERSQVAVLAAAWTGSGADAAVHFVQRHCETGNSVVTEVRA 120 DADCAQLRAAASVLMEALRMERSQVAVLAAAWTGSGADAAVHFVQRHCETGNSVVTEVRA Sbjct 70 DADCAQLRAAASVLMEALRMERSQVAVLAAAWTGSGADAAVHFVQRHCETGNSVVTEVRA 129 Query 121 AAQRCESLRDNLWQLVDSKVATAIAIDERALAQRPAWLAAAEALTTEGADRPTAVEVVRQ 180 AAQRCESLRDNLWQLVDSKVATAIAIDERALAQRPAWLAAAEALTTEGADRPTAVEVVRQ Sbjct 130 AAQRCESLRDNLWQLVDSKVATAIAIDERALAQRPAWLAAAEALTTEGADRPTAVEVVRQ 189 Query 181 QIQPYVDDDVRNDWLTTMRSTTAGVAASYDAVTDQLASAPRAHFEIPDDLGPGRQPSPAS 240 QIQPYVDDDVRNDWLTTMRSTTAGVAASYDAVTDQLASAPRAHFEIPDDLGPGRQPSPAS Sbjct 190 QIQPYVDDDVRNDWLTTMRSTTAGVAASYDAVTDQLASAPRAHFEIPDDLGPGRQPSPAS 249 Query 241 VPAQPSATAAITPAAALPPPDPVPAVTSRPVTPSDFGSAPGDGSATPAGVGSAGGFGDAG 300 VPAQPSATAAITPAAALPPPDPVPAVTSRPVTPSDFGSAPGDGSATPAGVGSAGGFGDAG Sbjct 250 VPAQPSATAAITPAAALPPPDPVPAVTSRPVTPSDFGSAPGDGSATPAGVGSAGGFGDAG 309 Query 301 GTGGLGGFAGLAGLANRIVDAVDSLLGSVAEQLGDPLAADNPPGAVDPFAEDAADNADDG 360 GTGGLGGFAGLAGLANRIVDAVDSLLGSVAEQLGDPLAADNPPGAVDPFAEDAADNADDG Sbjct 310 GTGGLGGFAGLAGLANRIVDAVDSLLGSVAEQLGDPLAADNPPGAVDPFAEDAADNADDG 369 Query 361 DDAHPEEADEAAEPKEATEPDEADEVDDADESVPAERAQDVAEEATLPPVAEPPPPAAPP 420 DDAHPEEADEAAEPKEATEPDEADEVDDADESVPAERAQDVAEEATLPPVAEPPPPAAPP Sbjct 370 DDAHPEEADEAAEPKEATEPDEADEVDDADESVPAERAQDVAEEATLPPVAEPPPPAAPP 429 Query 421 VAEPPPPVAAPAPPGAPEPANGPSPEALSEGATPCEIAADELPQAGP 467 VAEPPPPVAAPAPPGAPEPANGPSPEALSEGATPCEIAADELPQAGP Sbjct 430 VAEPPPPVAAPAPPGAPEPANGPSPEALSEGATPCEIAADELPQAGP 476 >gi|15610575|ref|NP_217956.1| hypothetical protein Rv3439c [Mycobacterium tuberculosis H37Rv] gi|15843034|ref|NP_338071.1| hypothetical protein MT3544 [Mycobacterium tuberculosis CDC1551] gi|31794616|ref|NP_857109.1| hypothetical protein Mb3469c [Mycobacterium bovis AF2122/97] 48 more sequence titles Length=467 Score = 903 bits (2334), Expect = 0.0, Method: Compositional matrix adjust. Identities = 466/467 (99%), Positives = 467/467 (100%), Gaps = 0/467 (0%) Query 1 VADRLNVAERLAEGRPAAEHTQSYVRACHLVGYQHPDLTAYPAQIHDWYGSEDGLDLHAL 60 +ADRLNVAERLAEGRPAAEHTQSYVRACHLVGYQHPDLTAYPAQIHDWYGSEDGLDLHAL Sbjct 1 MADRLNVAERLAEGRPAAEHTQSYVRACHLVGYQHPDLTAYPAQIHDWYGSEDGLDLHAL 60 Query 61 DADCAQLRAAASVLMEALRMERSQVAVLAAAWTGSGADAAVHFVQRHCETGNSVVTEVRA 120 DADCAQLRAAASVLMEALRMERSQVAVLAAAWTGSGADAAVHFVQRHCETGNSVVTEVRA Sbjct 61 DADCAQLRAAASVLMEALRMERSQVAVLAAAWTGSGADAAVHFVQRHCETGNSVVTEVRA 120 Query 121 AAQRCESLRDNLWQLVDSKVATAIAIDERALAQRPAWLAAAEALTTEGADRPTAVEVVRQ 180 AAQRCESLRDNLWQLVDSKVATAIAIDERALAQRPAWLAAAEALTTEGADRPTAVEVVRQ Sbjct 121 AAQRCESLRDNLWQLVDSKVATAIAIDERALAQRPAWLAAAEALTTEGADRPTAVEVVRQ 180 Query 181 QIQPYVDDDVRNDWLTTMRSTTAGVAASYDAVTDQLASAPRAHFEIPDDLGPGRQPSPAS 240 QIQPYVDDDVRNDWLTTMRSTTAGVAASYDAVTDQLASAPRAHFEIPDDLGPGRQPSPAS Sbjct 181 QIQPYVDDDVRNDWLTTMRSTTAGVAASYDAVTDQLASAPRAHFEIPDDLGPGRQPSPAS 240 Query 241 VPAQPSATAAITPAAALPPPDPVPAVTSRPVTPSDFGSAPGDGSATPAGVGSAGGFGDAG 300 VPAQPSATAAITPAAALPPPDPVPAVTSRPVTPSDFGSAPGDGSATPAGVGSAGGFGDAG Sbjct 241 VPAQPSATAAITPAAALPPPDPVPAVTSRPVTPSDFGSAPGDGSATPAGVGSAGGFGDAG 300 Query 301 GTGGLGGFAGLAGLANRIVDAVDSLLGSVAEQLGDPLAADNPPGAVDPFAEDAADNADDG 360 GTGGLGGFAGLAGLANRIVDAVDSLLGSVAEQLGDPLAADNPPGAVDPFAEDAADNADDG Sbjct 301 GTGGLGGFAGLAGLANRIVDAVDSLLGSVAEQLGDPLAADNPPGAVDPFAEDAADNADDG 360 Query 361 DDAHPEEADEAAEPKEATEPDEADEVDDADESVPAERAQDVAEEATLPPVAEPPPPAAPP 420 DDAHPEEADEAAEPKEATEPDEADEVDDADESVPAERAQDVAEEATLPPVAEPPPPAAPP Sbjct 361 DDAHPEEADEAAEPKEATEPDEADEVDDADESVPAERAQDVAEEATLPPVAEPPPPAAPP 420 Query 421 VAEPPPPVAAPAPPGAPEPANGPSPEALSEGATPCEIAADELPQAGP 467 VAEPPPPVAAPAPPGAPEPANGPSPEALSEGATPCEIAADELPQAGP Sbjct 421 VAEPPPPVAAPAPPGAPEPANGPSPEALSEGATPCEIAADELPQAGP 467 >gi|289449143|ref|ZP_06438887.1| conserved alanine and proline rich protein [Mycobacterium tuberculosis CPHL_A] gi|289422101|gb|EFD19302.1| conserved alanine and proline rich protein [Mycobacterium tuberculosis CPHL_A] Length=467 Score = 902 bits (2332), Expect = 0.0, Method: Compositional matrix adjust. Identities = 465/467 (99%), Positives = 466/467 (99%), Gaps = 0/467 (0%) Query 1 VADRLNVAERLAEGRPAAEHTQSYVRACHLVGYQHPDLTAYPAQIHDWYGSEDGLDLHAL 60 +ADRLNVAERLAEGRPAAEHTQSYVRACHLVGYQHPDLTAYPAQIHDWYGSEDGLDLHAL Sbjct 1 MADRLNVAERLAEGRPAAEHTQSYVRACHLVGYQHPDLTAYPAQIHDWYGSEDGLDLHAL 60 Query 61 DADCAQLRAAASVLMEALRMERSQVAVLAAAWTGSGADAAVHFVQRHCETGNSVVTEVRA 120 DADCAQLRAAASVLMEALRMERSQVAVLAAAWTGSGADAAVHFVQRHCETGNSVVTEVRA Sbjct 61 DADCAQLRAAASVLMEALRMERSQVAVLAAAWTGSGADAAVHFVQRHCETGNSVVTEVRA 120 Query 121 AAQRCESLRDNLWQLVDSKVATAIAIDERALAQRPAWLAAAEALTTEGADRPTAVEVVRQ 180 AAQRCESLRDNLWQLVDSKVATAIAIDERALAQRPAWLAAAEALTTEGADRPTAVEVVRQ Sbjct 121 AAQRCESLRDNLWQLVDSKVATAIAIDERALAQRPAWLAAAEALTTEGADRPTAVEVVRQ 180 Query 181 QIQPYVDDDVRNDWLTTMRSTTAGVAASYDAVTDQLASAPRAHFEIPDDLGPGRQPSPAS 240 QIQPYVDDDVRNDWLTTMRSTTAGVAASYDAVTDQLASAPRAHFEIPDDLGPGRQPSPAS Sbjct 181 QIQPYVDDDVRNDWLTTMRSTTAGVAASYDAVTDQLASAPRAHFEIPDDLGPGRQPSPAS 240 Query 241 VPAQPSATAAITPAAALPPPDPVPAVTSRPVTPSDFGSAPGDGSATPAGVGSAGGFGDAG 300 VPAQPSATAAITPAAA PPPDPVPAVTSRPVTPSDFGSAPGDGSATPAGVGSAGGFGDAG Sbjct 241 VPAQPSATAAITPAAAFPPPDPVPAVTSRPVTPSDFGSAPGDGSATPAGVGSAGGFGDAG 300 Query 301 GTGGLGGFAGLAGLANRIVDAVDSLLGSVAEQLGDPLAADNPPGAVDPFAEDAADNADDG 360 GTGGLGGFAGLAGLANRIVDAVDSLLGSVAEQLGDPLAADNPPGAVDPFAEDAADNADDG Sbjct 301 GTGGLGGFAGLAGLANRIVDAVDSLLGSVAEQLGDPLAADNPPGAVDPFAEDAADNADDG 360 Query 361 DDAHPEEADEAAEPKEATEPDEADEVDDADESVPAERAQDVAEEATLPPVAEPPPPAAPP 420 DDAHPEEADEAAEPKEATEPDEADEVDDADESVPAERAQDVAEEATLPPVAEPPPPAAPP Sbjct 361 DDAHPEEADEAAEPKEATEPDEADEVDDADESVPAERAQDVAEEATLPPVAEPPPPAAPP 420 Query 421 VAEPPPPVAAPAPPGAPEPANGPSPEALSEGATPCEIAADELPQAGP 467 VAEPPPPVAAPAPPGAPEPANGPSPEALSEGATPCEIAADELPQAGP Sbjct 421 VAEPPPPVAAPAPPGAPEPANGPSPEALSEGATPCEIAADELPQAGP 467 >gi|254552543|ref|ZP_05142990.1| hypothetical protein Mtube_19195 [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|297636098|ref|ZP_06953878.1| hypothetical protein MtubK4_18330 [Mycobacterium tuberculosis KZN 4207] gi|297733098|ref|ZP_06962216.1| hypothetical protein MtubKR_18500 [Mycobacterium tuberculosis KZN R506] gi|313660429|ref|ZP_07817309.1| hypothetical protein MtubKV_18495 [Mycobacterium tuberculosis KZN V2475] Length=476 Score = 901 bits (2328), Expect = 0.0, Method: Compositional matrix adjust. Identities = 466/467 (99%), Positives = 466/467 (99%), Gaps = 0/467 (0%) Query 1 VADRLNVAERLAEGRPAAEHTQSYVRACHLVGYQHPDLTAYPAQIHDWYGSEDGLDLHAL 60 VADRLNVAERLAEGRPAAEHTQSYVRACHLVGYQHPDLTAYPAQIHDWYGSEDGLDLHAL Sbjct 10 VADRLNVAERLAEGRPAAEHTQSYVRACHLVGYQHPDLTAYPAQIHDWYGSEDGLDLHAL 69 Query 61 DADCAQLRAAASVLMEALRMERSQVAVLAAAWTGSGADAAVHFVQRHCETGNSVVTEVRA 120 DADCAQLRAAASVLMEALRMERSQVAVLAAAWTGS ADAAVHFVQRHCETGNSVVTEVRA Sbjct 70 DADCAQLRAAASVLMEALRMERSQVAVLAAAWTGSEADAAVHFVQRHCETGNSVVTEVRA 129 Query 121 AAQRCESLRDNLWQLVDSKVATAIAIDERALAQRPAWLAAAEALTTEGADRPTAVEVVRQ 180 AAQRCESLRDNLWQLVDSKVATAIAIDERALAQRPAWLAAAEALTTEGADRPTAVEVVRQ Sbjct 130 AAQRCESLRDNLWQLVDSKVATAIAIDERALAQRPAWLAAAEALTTEGADRPTAVEVVRQ 189 Query 181 QIQPYVDDDVRNDWLTTMRSTTAGVAASYDAVTDQLASAPRAHFEIPDDLGPGRQPSPAS 240 QIQPYVDDDVRNDWLTTMRSTTAGVAASYDAVTDQLASAPRAHFEIPDDLGPGRQPSPAS Sbjct 190 QIQPYVDDDVRNDWLTTMRSTTAGVAASYDAVTDQLASAPRAHFEIPDDLGPGRQPSPAS 249 Query 241 VPAQPSATAAITPAAALPPPDPVPAVTSRPVTPSDFGSAPGDGSATPAGVGSAGGFGDAG 300 VPAQPSATAAITPAAALPPPDPVPAVTSRPVTPSDFGSAPGDGSATPAGVGSAGGFGDAG Sbjct 250 VPAQPSATAAITPAAALPPPDPVPAVTSRPVTPSDFGSAPGDGSATPAGVGSAGGFGDAG 309 Query 301 GTGGLGGFAGLAGLANRIVDAVDSLLGSVAEQLGDPLAADNPPGAVDPFAEDAADNADDG 360 GTGGLGGFAGLAGLANRIVDAVDSLLGSVAEQLGDPLAADNPPGAVDPFAEDAADNADDG Sbjct 310 GTGGLGGFAGLAGLANRIVDAVDSLLGSVAEQLGDPLAADNPPGAVDPFAEDAADNADDG 369 Query 361 DDAHPEEADEAAEPKEATEPDEADEVDDADESVPAERAQDVAEEATLPPVAEPPPPAAPP 420 DDAHPEEADEAAEPKEATEPDEADEVDDADESVPAERAQDVAEEATLPPVAEPPPPAAPP Sbjct 370 DDAHPEEADEAAEPKEATEPDEADEVDDADESVPAERAQDVAEEATLPPVAEPPPPAAPP 429 Query 421 VAEPPPPVAAPAPPGAPEPANGPSPEALSEGATPCEIAADELPQAGP 467 VAEPPPPVAAPAPPGAPEPANGPSPEALSEGATPCEIAADELPQAGP Sbjct 430 VAEPPPPVAAPAPPGAPEPANGPSPEALSEGATPCEIAADELPQAGP 476 >gi|148824649|ref|YP_001289403.1| hypothetical protein TBFG_13476 [Mycobacterium tuberculosis F11] gi|253800484|ref|YP_003033485.1| hypothetical protein TBMG_03487 [Mycobacterium tuberculosis KZN 1435] gi|148723176|gb|ABR07801.1| conserved alanine and proline rich protein [Mycobacterium tuberculosis F11] gi|253321987|gb|ACT26590.1| conserved alanine and proline rich protein [Mycobacterium tuberculosis KZN 1435] gi|328460215|gb|AEB05638.1| conserved alanine and proline rich protein [Mycobacterium tuberculosis KZN 4207] gi|344221275|gb|AEN01906.1| hypothetical protein MTCTRI2_3507 [Mycobacterium tuberculosis CTRI-2] Length=467 Score = 901 bits (2328), Expect = 0.0, Method: Compositional matrix adjust. Identities = 465/467 (99%), Positives = 466/467 (99%), Gaps = 0/467 (0%) Query 1 VADRLNVAERLAEGRPAAEHTQSYVRACHLVGYQHPDLTAYPAQIHDWYGSEDGLDLHAL 60 +ADRLNVAERLAEGRPAAEHTQSYVRACHLVGYQHPDLTAYPAQIHDWYGSEDGLDLHAL Sbjct 1 MADRLNVAERLAEGRPAAEHTQSYVRACHLVGYQHPDLTAYPAQIHDWYGSEDGLDLHAL 60 Query 61 DADCAQLRAAASVLMEALRMERSQVAVLAAAWTGSGADAAVHFVQRHCETGNSVVTEVRA 120 DADCAQLRAAASVLMEALRMERSQVAVLAAAWTGS ADAAVHFVQRHCETGNSVVTEVRA Sbjct 61 DADCAQLRAAASVLMEALRMERSQVAVLAAAWTGSEADAAVHFVQRHCETGNSVVTEVRA 120 Query 121 AAQRCESLRDNLWQLVDSKVATAIAIDERALAQRPAWLAAAEALTTEGADRPTAVEVVRQ 180 AAQRCESLRDNLWQLVDSKVATAIAIDERALAQRPAWLAAAEALTTEGADRPTAVEVVRQ Sbjct 121 AAQRCESLRDNLWQLVDSKVATAIAIDERALAQRPAWLAAAEALTTEGADRPTAVEVVRQ 180 Query 181 QIQPYVDDDVRNDWLTTMRSTTAGVAASYDAVTDQLASAPRAHFEIPDDLGPGRQPSPAS 240 QIQPYVDDDVRNDWLTTMRSTTAGVAASYDAVTDQLASAPRAHFEIPDDLGPGRQPSPAS Sbjct 181 QIQPYVDDDVRNDWLTTMRSTTAGVAASYDAVTDQLASAPRAHFEIPDDLGPGRQPSPAS 240 Query 241 VPAQPSATAAITPAAALPPPDPVPAVTSRPVTPSDFGSAPGDGSATPAGVGSAGGFGDAG 300 VPAQPSATAAITPAAALPPPDPVPAVTSRPVTPSDFGSAPGDGSATPAGVGSAGGFGDAG Sbjct 241 VPAQPSATAAITPAAALPPPDPVPAVTSRPVTPSDFGSAPGDGSATPAGVGSAGGFGDAG 300 Query 301 GTGGLGGFAGLAGLANRIVDAVDSLLGSVAEQLGDPLAADNPPGAVDPFAEDAADNADDG 360 GTGGLGGFAGLAGLANRIVDAVDSLLGSVAEQLGDPLAADNPPGAVDPFAEDAADNADDG Sbjct 301 GTGGLGGFAGLAGLANRIVDAVDSLLGSVAEQLGDPLAADNPPGAVDPFAEDAADNADDG 360 Query 361 DDAHPEEADEAAEPKEATEPDEADEVDDADESVPAERAQDVAEEATLPPVAEPPPPAAPP 420 DDAHPEEADEAAEPKEATEPDEADEVDDADESVPAERAQDVAEEATLPPVAEPPPPAAPP Sbjct 361 DDAHPEEADEAAEPKEATEPDEADEVDDADESVPAERAQDVAEEATLPPVAEPPPPAAPP 420 Query 421 VAEPPPPVAAPAPPGAPEPANGPSPEALSEGATPCEIAADELPQAGP 467 VAEPPPPVAAPAPPGAPEPANGPSPEALSEGATPCEIAADELPQAGP Sbjct 421 VAEPPPPVAAPAPPGAPEPANGPSPEALSEGATPCEIAADELPQAGP 467 >gi|308374876|ref|ZP_07437713.2| conserved alanine and proline rich protein [Mycobacterium tuberculosis SUMu006] gi|308340421|gb|EFP29272.1| conserved alanine and proline rich protein [Mycobacterium tuberculosis SUMu006] Length=455 Score = 876 bits (2263), Expect = 0.0, Method: Compositional matrix adjust. Identities = 452/455 (99%), Positives = 453/455 (99%), Gaps = 0/455 (0%) Query 1 VADRLNVAERLAEGRPAAEHTQSYVRACHLVGYQHPDLTAYPAQIHDWYGSEDGLDLHAL 60 +ADRLNVAERLAEGRPAAEHTQSYVRACHLVGYQHPDLTAYPAQIHDWYGSEDGLDLHAL Sbjct 1 MADRLNVAERLAEGRPAAEHTQSYVRACHLVGYQHPDLTAYPAQIHDWYGSEDGLDLHAL 60 Query 61 DADCAQLRAAASVLMEALRMERSQVAVLAAAWTGSGADAAVHFVQRHCETGNSVVTEVRA 120 DADCAQLRAAASVLMEALRMERSQVAVLAAAWTGSGADAAVHFVQRHCETGNSVVTEVRA Sbjct 61 DADCAQLRAAASVLMEALRMERSQVAVLAAAWTGSGADAAVHFVQRHCETGNSVVTEVRA 120 Query 121 AAQRCESLRDNLWQLVDSKVATAIAIDERALAQRPAWLAAAEALTTEGADRPTAVEVVRQ 180 AAQRCESLRDNLWQLVDSKVATAIAIDERALAQRPAWLAAAEALTTEGADRPTAVEVVRQ Sbjct 121 AAQRCESLRDNLWQLVDSKVATAIAIDERALAQRPAWLAAAEALTTEGADRPTAVEVVRQ 180 Query 181 QIQPYVDDDVRNDWLTTMRSTTAGVAASYDAVTDQLASAPRAHFEIPDDLGPGRQPSPAS 240 QIQPYVDDDVRNDWLTTMRSTTAGVAASYDAVTDQLASAPRAHFEIPDDLGPGRQPSPAS Sbjct 181 QIQPYVDDDVRNDWLTTMRSTTAGVAASYDAVTDQLASAPRAHFEIPDDLGPGRQPSPAS 240 Query 241 VPAQPSATAAITPAAALPPPDPVPAVTSRPVTPSDFGSAPGDGSATPAGVGSAGGFGDAG 300 VPAQPSATAAITPAAALPPPDPVPAVTSRPVTPSDFGSAPGDGSATPAGVGSAGGFGDAG Sbjct 241 VPAQPSATAAITPAAALPPPDPVPAVTSRPVTPSDFGSAPGDGSATPAGVGSAGGFGDAG 300 Query 301 GTGGLGGFAGLAGLANRIVDAVDSLLGSVAEQLGDPLAADNPPGAVDPFAEDAADNADDG 360 GTGGLGGFAGLAGLANRIVDAVDSLLGSVAEQLGDPLAADNPPGAVDPFAEDAADNADDG Sbjct 301 GTGGLGGFAGLAGLANRIVDAVDSLLGSVAEQLGDPLAADNPPGAVDPFAEDAADNADDG 360 Query 361 DDAHPEEADEAAEPKEATEPDEADEVDDADESVPAERAQDVAEEATLPPVAEPPPPAAPP 420 DDAHPEEADEAAEPKEATEPDEADEVDDADESVPAERAQDVAEEATLPPVAEPPPPAAPP Sbjct 361 DDAHPEEADEAAEPKEATEPDEADEVDDADESVPAERAQDVAEEATLPPVAEPPPPAAPP 420 Query 421 VAEPPPPVAAPAPPGAPEPANGPSPEALSEGATPC 455 VAEPPPPVAAPAPPGAPEPANGPSPEALSEGA P Sbjct 421 VAEPPPPVAAPAPPGAPEPANGPSPEALSEGADPL 455 >gi|308373743|ref|ZP_07433523.2| conserved alanine and proline rich protein [Mycobacterium tuberculosis SUMu005] gi|308336546|gb|EFP25397.1| conserved alanine and proline rich protein [Mycobacterium tuberculosis SUMu005] Length=443 Score = 856 bits (2211), Expect = 0.0, Method: Compositional matrix adjust. Identities = 442/443 (99%), Positives = 443/443 (100%), Gaps = 0/443 (0%) Query 25 VRACHLVGYQHPDLTAYPAQIHDWYGSEDGLDLHALDADCAQLRAAASVLMEALRMERSQ 84 +RACHLVGYQHPDLTAYPAQIHDWYGSEDGLDLHALDADCAQLRAAASVLMEALRMERSQ Sbjct 1 MRACHLVGYQHPDLTAYPAQIHDWYGSEDGLDLHALDADCAQLRAAASVLMEALRMERSQ 60 Query 85 VAVLAAAWTGSGADAAVHFVQRHCETGNSVVTEVRAAAQRCESLRDNLWQLVDSKVATAI 144 VAVLAAAWTGSGADAAVHFVQRHCETGNSVVTEVRAAAQRCESLRDNLWQLVDSKVATAI Sbjct 61 VAVLAAAWTGSGADAAVHFVQRHCETGNSVVTEVRAAAQRCESLRDNLWQLVDSKVATAI 120 Query 145 AIDERALAQRPAWLAAAEALTTEGADRPTAVEVVRQQIQPYVDDDVRNDWLTTMRSTTAG 204 AIDERALAQRPAWLAAAEALTTEGADRPTAVEVVRQQIQPYVDDDVRNDWLTTMRSTTAG Sbjct 121 AIDERALAQRPAWLAAAEALTTEGADRPTAVEVVRQQIQPYVDDDVRNDWLTTMRSTTAG 180 Query 205 VAASYDAVTDQLASAPRAHFEIPDDLGPGRQPSPASVPAQPSATAAITPAAALPPPDPVP 264 VAASYDAVTDQLASAPRAHFEIPDDLGPGRQPSPASVPAQPSATAAITPAAALPPPDPVP Sbjct 181 VAASYDAVTDQLASAPRAHFEIPDDLGPGRQPSPASVPAQPSATAAITPAAALPPPDPVP 240 Query 265 AVTSRPVTPSDFGSAPGDGSATPAGVGSAGGFGDAGGTGGLGGFAGLAGLANRIVDAVDS 324 AVTSRPVTPSDFGSAPGDGSATPAGVGSAGGFGDAGGTGGLGGFAGLAGLANRIVDAVDS Sbjct 241 AVTSRPVTPSDFGSAPGDGSATPAGVGSAGGFGDAGGTGGLGGFAGLAGLANRIVDAVDS 300 Query 325 LLGSVAEQLGDPLAADNPPGAVDPFAEDAADNADDGDDAHPEEADEAAEPKEATEPDEAD 384 LLGSVAEQLGDPLAADNPPGAVDPFAEDAADNADDGDDAHPEEADEAAEPKEATEPDEAD Sbjct 301 LLGSVAEQLGDPLAADNPPGAVDPFAEDAADNADDGDDAHPEEADEAAEPKEATEPDEAD 360 Query 385 EVDDADESVPAERAQDVAEEATLPPVAEPPPPAAPPVAEPPPPVAAPAPPGAPEPANGPS 444 EVDDADESVPAERAQDVAEEATLPPVAEPPPPAAPPVAEPPPPVAAPAPPGAPEPANGPS Sbjct 361 EVDDADESVPAERAQDVAEEATLPPVAEPPPPAAPPVAEPPPPVAAPAPPGAPEPANGPS 420 Query 445 PEALSEGATPCEIAADELPQAGP 467 PEALSEGATPCEIAADELPQAGP Sbjct 421 PEALSEGATPCEIAADELPQAGP 443 >gi|340628410|ref|YP_004746862.1| hypothetical protein MCAN_34561 [Mycobacterium canettii CIPT 140010059] gi|340006600|emb|CCC45787.1| conserved hypothetical alanine and proline rich protein [Mycobacterium canettii CIPT 140010059] Length=466 Score = 665 bits (1716), Expect = 0.0, Method: Compositional matrix adjust. Identities = 458/467 (99%), Positives = 460/467 (99%), Gaps = 1/467 (0%) Query 1 VADRLNVAERLAEGRPAAEHTQSYVRACHLVGYQHPDLTAYPAQIHDWYGSEDGLDLHAL 60 +ADRLNVAERLAEGRPAAEHTQSYVRACHLVGYQHPDLTAYPAQIHDWYGSEDGLDLHAL Sbjct 1 MADRLNVAERLAEGRPAAEHTQSYVRACHLVGYQHPDLTAYPAQIHDWYGSEDGLDLHAL 60 Query 61 DADCAQLRAAASVLMEALRMERSQVAVLAAAWTGSGADAAVHFVQRHCETGNSVVTEVRA 120 DADCAQLRAAASVLMEALRMERSQVAVLAAAWTGSGADAAVHFVQRHCETGNSVVTEVRA Sbjct 61 DADCAQLRAAASVLMEALRMERSQVAVLAAAWTGSGADAAVHFVQRHCETGNSVVTEVRA 120 Query 121 AAQRCESLRDNLWQLVDSKVATAIAIDERALAQRPAWLAAAEALTTEGADRPTAVEVVRQ 180 AAQRCESLRDNLWQLVDSKVATAIAIDERALAQRPAWLAAAEALTTEGADRPTAVEVVRQ Sbjct 121 AAQRCESLRDNLWQLVDSKVATAIAIDERALAQRPAWLAAAEALTTEGADRPTAVEVVRQ 180 Query 181 QIQPYVDDDVRNDWLTTMRSTTAGVAASYDAVTDQLASAPRAHFEIPDDLGPGRQPSPAS 240 QIQPYVDDDVRNDWLTTMRSTTA VAASYDAVTDQLASAP AHFEIPDDLGPGRQPSPAS Sbjct 181 QIQPYVDDDVRNDWLTTMRSTTADVAASYDAVTDQLASAPCAHFEIPDDLGPGRQPSPAS 240 Query 241 VPAQPSATAAITPAAALPPPDPVPAVTSRPVTPSDFGSAPGDGSATPAGVGSAGGFGDAG 300 VPAQPSATAAITPAAALPPPDPVPAVTSRPVTPSDFGSAPGDGSATPAGVGSAGGFGDAG Sbjct 241 VPAQPSATAAITPAAALPPPDPVPAVTSRPVTPSDFGSAPGDGSATPAGVGSAGGFGDAG 300 Query 301 GTGGLGGFAGLAGLANRIVDAVDSLLGSVAEQLGDPLAADNPPGAVDPFAEDAADNADDG 360 GTGGLGGFAGLAGLANRIVDAVDSLLGSVAEQLGDPLAADNPPGAVDPFAEDAADNADDG Sbjct 301 GTGGLGGFAGLAGLANRIVDAVDSLLGSVAEQLGDPLAADNPPGAVDPFAEDAADNADDG 360 Query 361 DDAHPEEADEAAEPKEATEPDEADEVDDADESVPAERAQDVAEEATLPPVAEPPPPAAPP 420 DDAHPEEADEAAEPKEATEPDEADEVDDADESVPAERA+DVAEEATL P PPPAAPP Sbjct 361 DDAHPEEADEAAEPKEATEPDEADEVDDADESVPAERARDVAEEATL-PPVAEPPPAAPP 419 Query 421 VAEPPPPVAAPAPPGAPEPANGPSPEALSEGATPCEIAADELPQAGP 467 VAEPPPPVAAPAPPGAPEPANGPSPEALSEGATPCEIAADELPQAGP Sbjct 420 VAEPPPPVAAPAPPGAPEPANGPSPEALSEGATPCEIAADELPQAGP 466 >gi|289555711|ref|ZP_06444921.1| conserved alanine and proline rich protein [Mycobacterium tuberculosis KZN 605] gi|289440343|gb|EFD22836.1| conserved alanine and proline rich protein [Mycobacterium tuberculosis KZN 605] Length=281 Score = 530 bits (1366), Expect = 2e-148, Method: Compositional matrix adjust. Identities = 265/268 (99%), Positives = 266/268 (99%), Gaps = 0/268 (0%) Query 1 VADRLNVAERLAEGRPAAEHTQSYVRACHLVGYQHPDLTAYPAQIHDWYGSEDGLDLHAL 60 +ADRLNVAERLAEGRPAAEHTQSYVRACHLVGYQHPDLTAYPAQIHDWYGSEDGLDLHAL Sbjct 1 MADRLNVAERLAEGRPAAEHTQSYVRACHLVGYQHPDLTAYPAQIHDWYGSEDGLDLHAL 60 Query 61 DADCAQLRAAASVLMEALRMERSQVAVLAAAWTGSGADAAVHFVQRHCETGNSVVTEVRA 120 DADCAQLRAAASVLMEALRMERSQVAVLAAAWTGS ADAAVHFVQRHCETGNSVVTEVRA Sbjct 61 DADCAQLRAAASVLMEALRMERSQVAVLAAAWTGSEADAAVHFVQRHCETGNSVVTEVRA 120 Query 121 AAQRCESLRDNLWQLVDSKVATAIAIDERALAQRPAWLAAAEALTTEGADRPTAVEVVRQ 180 AAQRCESLRDNLWQLVDSKVATAIAIDERALAQRPAWLAAAEALTTEGADRPTAVEVVRQ Sbjct 121 AAQRCESLRDNLWQLVDSKVATAIAIDERALAQRPAWLAAAEALTTEGADRPTAVEVVRQ 180 Query 181 QIQPYVDDDVRNDWLTTMRSTTAGVAASYDAVTDQLASAPRAHFEIPDDLGPGRQPSPAS 240 QIQPYVDDDVRNDWLTTMRSTTAGVAASYDAVTDQLASAPRAHFEIPDDLGPGRQPSPAS Sbjct 181 QIQPYVDDDVRNDWLTTMRSTTAGVAASYDAVTDQLASAPRAHFEIPDDLGPGRQPSPAS 240 Query 241 VPAQPSATAAITPAAALPPPDPVPAVTS 268 VPAQPSATAAITPAAALPPPDPVPAV S Sbjct 241 VPAQPSATAAITPAAALPPPDPVPAVXS 268 >gi|298526924|ref|ZP_07014333.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A] gi|298496718|gb|EFI32012.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A] Length=314 Score = 510 bits (1313), Expect = 2e-142, Method: Compositional matrix adjust. Identities = 259/275 (95%), Positives = 261/275 (95%), Gaps = 3/275 (1%) Query 1 VADRLNVAERLAEGRPAAEHTQSYVRACHLVGYQHPDLTAYPAQIHDWYGSEDGLDLHAL 60 VADRLNVAERLAEGRPAAEHTQSYVRACHLVGYQHPDLTAYPAQIHDWYGSEDGLDLHAL Sbjct 34 VADRLNVAERLAEGRPAAEHTQSYVRACHLVGYQHPDLTAYPAQIHDWYGSEDGLDLHAL 93 Query 61 DADCAQLRAAASVLMEALRMERSQVAVLAAAWTGSGADAAVHFVQRHCETGNSVVTEVRA 120 DADCAQLRAAASVLMEALRMERSQVAVLAAAWTGSGADAAVHFVQRHCETGNSVVTEVRA Sbjct 94 DADCAQLRAAASVLMEALRMERSQVAVLAAAWTGSGADAAVHFVQRHCETGNSVVTEVRA 153 Query 121 AAQRCESLRDNLWQLVDSKVATAIAIDERALAQRPAWLAAAEALTTEGADRPTAVEVVRQ 180 AAQRCESLRDNLWQLVDSKVATAIAIDERALAQRPAWLAAAEALTTEGADRPTAVEVVRQ Sbjct 154 AAQRCESLRDNLWQLVDSKVATAIAIDERALAQRPAWLAAAEALTTEGADRPTAVEVVRQ 213 Query 181 QIQPYVDDDVRNDWLTTMRSTTAGVAASYDAVTDQLASAPRAHFEIPDDLGPGRQPSPAS 240 QIQPYVDDDVRNDWLTTMRSTTAGVAASYDAVTDQLASAPRAHFEIPDDLGPGRQPSPAS Sbjct 214 QIQPYVDDDVRNDWLTTMRSTTAGVAASYDAVTDQLASAPRAHFEIPDDLGPGRQPSPAS 273 Query 241 VPAQPSATAAITPAAALPPPDPVPAVTSRPVTPSD 275 VPAQPSATAAITPA P + R + PSD Sbjct 274 VPAQPSATAAITPAG---RSSPAGSGAGRDLAPSD 305 >gi|289763620|ref|ZP_06522998.1| conserved alanine and proline rich protein [Mycobacterium tuberculosis GM 1503] gi|289711126|gb|EFD75142.1| conserved alanine and proline rich protein [Mycobacterium tuberculosis GM 1503] Length=251 Score = 472 bits (1215), Expect = 5e-131, Method: Compositional matrix adjust. Identities = 241/244 (99%), Positives = 242/244 (99%), Gaps = 0/244 (0%) Query 73 VLMEALRMERSQVAVLAAAWTGSGADAAVHFVQRHCETGNSVVTEVRAAAQRCESLRDNL 132 +LMEALRMERSQVAVLAAAWTGS ADAAVHFVQRHCETGNSVVTEVRAAAQRCESLRDNL Sbjct 1 MLMEALRMERSQVAVLAAAWTGSEADAAVHFVQRHCETGNSVVTEVRAAAQRCESLRDNL 60 Query 133 WQLVDSKVATAIAIDERALAQRPAWLAAAEALTTEGADRPTAVEVVRQQIQPYVDDDVRN 192 WQLVDSKVATAIAIDERALAQRPAWLAAAEALTTEGADRPTAVEVVRQQIQPYVDDDVRN Sbjct 61 WQLVDSKVATAIAIDERALAQRPAWLAAAEALTTEGADRPTAVEVVRQQIQPYVDDDVRN 120 Query 193 DWLTTMRSTTAGVAASYDAVTDQLASAPRAHFEIPDDLGPGRQPSPASVPAQPSATAAIT 252 DWLTTMRSTTAGVAASYDAVTDQLASAPRAHFEIPDDLGPGRQPSPASVPAQPSATAAIT Sbjct 121 DWLTTMRSTTAGVAASYDAVTDQLASAPRAHFEIPDDLGPGRQPSPASVPAQPSATAAIT 180 Query 253 PAAALPPPDPVPAVTSRPVTPSDFGSAPGDGSATPAGVGSAGGFGDAGGTGGLGGFAGLA 312 PAAALPPPDPVPAVTSRPVTPSDFGSAPGDGSATPAGVGSAGGFGDAGGTGGLGGFAGLA Sbjct 181 PAAALPPPDPVPAVTSRPVTPSDFGSAPGDGSATPAGVGSAGGFGDAGGTGGLGGFAGLA 240 Query 313 GLAN 316 GLA Sbjct 241 GLAQ 244 >gi|167966781|ref|ZP_02549058.1| conserved hypothetical alanine and proline rich protein [Mycobacterium tuberculosis H37Ra] Length=209 Score = 412 bits (1060), Expect = 4e-113, Method: Compositional matrix adjust. Identities = 200/200 (100%), Positives = 200/200 (100%), Gaps = 0/200 (0%) Query 1 VADRLNVAERLAEGRPAAEHTQSYVRACHLVGYQHPDLTAYPAQIHDWYGSEDGLDLHAL 60 VADRLNVAERLAEGRPAAEHTQSYVRACHLVGYQHPDLTAYPAQIHDWYGSEDGLDLHAL Sbjct 10 VADRLNVAERLAEGRPAAEHTQSYVRACHLVGYQHPDLTAYPAQIHDWYGSEDGLDLHAL 69 Query 61 DADCAQLRAAASVLMEALRMERSQVAVLAAAWTGSGADAAVHFVQRHCETGNSVVTEVRA 120 DADCAQLRAAASVLMEALRMERSQVAVLAAAWTGSGADAAVHFVQRHCETGNSVVTEVRA Sbjct 70 DADCAQLRAAASVLMEALRMERSQVAVLAAAWTGSGADAAVHFVQRHCETGNSVVTEVRA 129 Query 121 AAQRCESLRDNLWQLVDSKVATAIAIDERALAQRPAWLAAAEALTTEGADRPTAVEVVRQ 180 AAQRCESLRDNLWQLVDSKVATAIAIDERALAQRPAWLAAAEALTTEGADRPTAVEVVRQ Sbjct 130 AAQRCESLRDNLWQLVDSKVATAIAIDERALAQRPAWLAAAEALTTEGADRPTAVEVVRQ 189 Query 181 QIQPYVDDDVRNDWLTTMRS 200 QIQPYVDDDVRNDWLTTMRS Sbjct 190 QIQPYVDDDVRNDWLTTMRS 209 >gi|240167803|ref|ZP_04746462.1| hypothetical protein MkanA1_00705 [Mycobacterium kansasii ATCC 12478] Length=458 Score = 346 bits (888), Expect = 4e-93, Method: Compositional matrix adjust. Identities = 241/475 (51%), Positives = 295/475 (63%), Gaps = 27/475 (5%) Query 1 VADRLNVAERLAEGRPAAEHTQSYVRACHLVGYQHPDLTAYPAQIHDWYGSEDGLDLHAL 60 +A+RL+VAERLAEGRPA E T++YVRAC +GY HPDLT+ P QI DWY SE+GLDL+AL Sbjct 1 MANRLDVAERLAEGRPALERTETYVRACQQLGYHHPDLTSRPGQISDWYDSEEGLDLYAL 60 Query 61 DADCAQLRAAASVLMEALRMERSQVAVLAAAWTGSGADAAVHFVQRHCETGNSVVTEVRA 120 DADCAQLRA + + EALR++R+QV LAAAW G GADAAV F+Q HC+ ++ TEVRA Sbjct 61 DADCAQLRAVGTAITEALRIQRAQVLELAAAWAGPGADAAVRFLQGHCDDATTLATEVRA 120 Query 121 AAQRCESLRDNLWQLVDSKVATAIAIDERALAQRPAWLAAAEALTTEGADRPTAVEVVRQ 180 AAQRCESLRDNLWQL+DSKVATAIAID+R L +RP W AAA + +R A EV+R Sbjct 121 AAQRCESLRDNLWQLIDSKVATAIAIDDRTLVERPVWSAAAGTVLAGAGERHMAEEVLRG 180 Query 181 QIQPYVDDDVRNDWLTTMRSTTAGVAASYDAVTDQLASAPRAHFEIPDDLGPGRQPSPAS 240 Q+ PYVD+D+R DWLT MRST AG+ ASYD VTD+LA+APR FE DLGPG P + Sbjct 181 QVIPYVDNDIRGDWLTAMRSTLAGMTASYDMVTDRLAAAPRVCFETAGDLGPGWSAWPIA 240 Query 241 VPAQPSATAAITPAAALPPPDPVPAVTS-RPVTPSDFGSAPGDGSATPAGVGSAGGFGDA 299 A + P DP PA + P T + +AP TP+G+G+A G G A Sbjct 241 PKAAAIPAGGMLDTL---PSDPAPAQNAVAPATSAAPTTAP-----TPSGLGAAMGDGAA 292 Query 300 GGTGGLGGFAGLAGLANRIVDAVDSLLGSVAEQLGDPLAADNPPGAVDPFAEDAADNADD 359 G GG G GL VD+++ +A G PLA +P G+ P D DD Sbjct 293 APLDGSGGLGGAGGLGELAGRIVDAMVDLLATATG-PLA--DPLGSESPAVPDDPMGDDD 349 Query 360 GDDAHPEEADEAAEPKEATEPDEADEVDDADESVPAERAQDVAEEATLPPVAEPPPPAAP 419 DDA P+EA + A+ KEA E E D + A + A LP AEPP Sbjct 350 ADDAGPDEAGKIADAKEAGEAGEPGSGTGTDGTAAA-----MPPVARLPSGAEPPAVGTA 404 Query 420 PVAEPP--------PPVAAPAPPGAPEPANGPSPEALSEGATPCEIAADELPQAG 466 P AEPP PP P+P A P NG P+ + G+TPCEIAADELP+AG Sbjct 405 PDAEPPAAGPLVTEPPAGGPSPASA--PVNGSPPQPATNGSTPCEIAADELPKAG 457 >gi|118465307|ref|YP_883517.1| hypothetical protein MAV_4382 [Mycobacterium avium 104] gi|118166594|gb|ABK67491.1| conserved hypothetical protein [Mycobacterium avium 104] Length=488 Score = 331 bits (849), Expect = 2e-88, Method: Compositional matrix adjust. Identities = 240/515 (47%), Positives = 298/515 (58%), Gaps = 77/515 (14%) Query 1 VADRLNVAERLAEGRPAAEHTQSYVRACHLVGYQHPDLTAYPAQIHDWYGSEDGLDLHAL 60 +ADRL+VA RLAEGR EHTQ+YV+ACH +GYQHPDLTA+PAQ+ +WY EDGLDL AL Sbjct 1 MADRLDVAGRLAEGRAGVEHTQTYVQACHALGYQHPDLTAHPAQVREWYAGEDGLDLRAL 60 Query 61 DADCAQLRAAASVLMEALRMERSQVAVLAAAWTGSGADAAVHFVQRHCETGNSVVTEVRA 120 D DCA+LRAA V EALR++R+QVA LA AWTG+G +AAV +QRHC+T ++ TE+RA Sbjct 61 DRDCAELRAAGVVAAEALRLQRAQVAELAVAWTGAGGEAAVQLLQRHCDTAEALATELRA 120 Query 121 AAQRCESLRDNLWQLVDSKVATAIAIDERALAQRPAWLAAAEALTTEGADRPTAVEVVRQ 180 AAQRCESLRDNLW L+D+K ATAIA+D+R AQRP WLAAA A+T DR A V+RQ Sbjct 121 AAQRCESLRDNLWYLIDAKAATAIAVDDRTRAQRPEWLAAAAAVTAGQPDRDDAHNVIRQ 180 Query 181 QIQPYVDDDVRNDWLTTMRSTTAGVAASYDAVTDQLASAPRAHFEIPDDLGPGRQPSPAS 240 ++ PYVD+D+RN+WLT MRS T GV SY V D++A+AP A FE+P DLG G P PA+ Sbjct 181 KVIPYVDNDIRNEWLTAMRSATDGVQTSYAMVVDRMAAAPAARFELPGDLGSGLVPVPAT 240 Query 241 VPAQPSATAAITPAAALPPPDPVPAV-TSRPVTP-------------------------- 273 P AA +PP D P + + P P Sbjct 241 RP---------LVAAPMPPLDAAPTLPDAAPTLPAAVSEPAAAATLPAAAPTPAAVPPAA 291 Query 274 ----SDFGSAPGDGSATPAGVGSAGGFGD----AGGTGGLGGFAGLAGLANRIVDAVDSL 325 +D+G+A GD + PA G GG + +G GLGG GL GLA +IVDA+ L Sbjct 292 AAPAADWGAALGDVAGMPA--GDLGGLAESGMGSGLGSGLGGGGGLLGLAGKIVDAMGGL 349 Query 326 LGSVAEQLGDPLAADNPPGAVDPFAEDAADNADDGDDAHPEEADEAAEPKEATEPDEADE 385 LGSV GD L +P G DP DNA GD H ++ +A + + + ADE Sbjct 350 LGSV----GDGLDGSDPFGDQDPL----DDNAFHGDPFHADDPADAKDAGDDADETAADE 401 Query 386 VDDADESVPAERAQDVAEEATLPPVAEPPPPA-APPVAEP-------------PPPVAAP 431 D PA A+ P EP P A P EP P Sbjct 402 PGAPDRPAPAGEAE---------PSGEPAPSGEAAPTGEPAQPVEATPPAAPPPAAPPPG 452 Query 432 APPGAPEPANGPSPEALSEGATPCEIAADELPQAG 466 APP P PA + G+TPC+IAAD+LPQAG Sbjct 453 APPADPGPAPAAAQPTPEPGSTPCQIAADQLPQAG 487 >gi|296165855|ref|ZP_06848342.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295898789|gb|EFG78308.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length=266 Score = 321 bits (822), Expect = 2e-85, Method: Compositional matrix adjust. Identities = 157/233 (68%), Positives = 188/233 (81%), Gaps = 0/233 (0%) Query 1 VADRLNVAERLAEGRPAAEHTQSYVRACHLVGYQHPDLTAYPAQIHDWYGSEDGLDLHAL 60 +ADRL+VAERLAEG PA +H QSYVRACH +GYQHPDLTA PAQ+ DWYG+EDGLDL AL Sbjct 1 MADRLDVAERLAEGVPAVDHAQSYVRACHALGYQHPDLTAQPAQLRDWYGTEDGLDLRAL 60 Query 61 DADCAQLRAAASVLMEALRMERSQVAVLAAAWTGSGADAAVHFVQRHCETGNSVVTEVRA 120 D DCA+LRAA + EALR++R+QVA LAAAWTG G DAAV F++RHC+T +V E+RA Sbjct 61 DRDCAELRAAGEAVTEALRVQRAQVAELAAAWTGPGGDAAVRFMERHCDTAATVAAELRA 120 Query 121 AAQRCESLRDNLWQLVDSKVATAIAIDERALAQRPAWLAAAEALTTEGADRPTAVEVVRQ 180 AAQRCESLRDNLW LVD+KVATAIA+D+ AQRPAWLAAA + T DR A VVR+ Sbjct 121 AAQRCESLRDNLWYLVDAKVATAIAVDDGTQAQRPAWLAAAATVITGVGDRQAAERVVRE 180 Query 181 QIQPYVDDDVRNDWLTTMRSTTAGVAASYDAVTDQLASAPRAHFEIPDDLGPG 233 Q+ PYVD+++R+DWLTTMRST GVA SYD VT+++A+AP F+ P DL PG Sbjct 181 QVLPYVDNEIRDDWLTTMRSTRDGVATSYDMVTERMAAAPAVLFDAPTDLDPG 233 >gi|336460688|gb|EGO39578.1| hypothetical protein MAPs_37790 [Mycobacterium avium subsp. paratuberculosis S397] Length=487 Score = 318 bits (816), Expect = 1e-84, Method: Compositional matrix adjust. Identities = 194/382 (51%), Positives = 234/382 (62%), Gaps = 26/382 (6%) Query 1 VADRLNVAERLAEGRPAAEHTQSYVRACHLVGYQHPDLTAYPAQIHDWYGSEDGLDLHAL 60 +ADRL+VA RLAEGR EHTQ+YV+ACH +GYQHPDLTA+PAQ+ +WY EDGLDL AL Sbjct 1 MADRLDVAGRLAEGRAGVEHTQTYVQACHALGYQHPDLTAHPAQVREWYAGEDGLDLRAL 60 Query 61 DADCAQLRAAASVLMEALRMERSQVAVLAAAWTGSGADAAVHFVQRHCETGNSVVTEVRA 120 D DCA+LRAA V EALR++R+QVA LA AWTG+G + AV +QRHC+T ++ TE+RA Sbjct 61 DRDCAELRAAGVVAAEALRLQRAQVAELAVAWTGAGGEVAVQLLQRHCDTAEALATELRA 120 Query 121 AAQRCESLRDNLWQLVDSKVATAIAIDERALAQRPAWLAAAEALTTEGADRPTAVEVVRQ 180 AAQRCESLRDNLW L+D+K ATAIA+D+R AQRP WLAAA A+T DR A ++RQ Sbjct 121 AAQRCESLRDNLWYLIDAKAATAIAVDDRTRAQRPEWLAAAAAVTAGQPDRDDAHNLIRQ 180 Query 181 QIQPYVDDDVRNDWLTTMRSTTAGVAASYDAVTDQLASAPRAHFEIPDDLGPGRQPSPAS 240 Q+ PYVD+D+RN+WL MRS T GV SY V D++A+AP A FE P DLG G P PA+ Sbjct 181 QVIPYVDNDIRNEWLPAMRSATDGVQTSYAMVVDRMAAAPAARFEFPGDLGSGLVPVPAT 240 Query 241 VPAQPSATAAITPAAALPPPDPVPAVTSRPVTPSDFGSAPGDGSATPAGVGSAGGFGDAG 300 P + + A LP P + A A GDA Sbjct 241 RPLVAAPMPPLDAAPTLPDAAPTLPAAVSEPAAAATLPAAVPSPAAAPAADWGAALGDAA 300 Query 301 GT--GGLGGFA----------------GLAGLANRIVDAVDSLLGSVAEQLGDPLAADNP 342 G G LGG A GL GLA +IVDA+ LLGSV GD L +P Sbjct 301 GMPAGDLGGLAGSGMGSGLGSGLGGGGGLLGLAGKIVDAMGGLLGSV----GDGLDGADP 356 Query 343 PGAVDPFAEDAADNADDGDDAH 364 G DP DNA GD H Sbjct 357 FGDQDPL----DDNAFHGDPFH 374 >gi|254776812|ref|ZP_05218328.1| hypothetical protein MaviaA2_19396 [Mycobacterium avium subsp. avium ATCC 25291] Length=260 Score = 316 bits (809), Expect = 7e-84, Method: Compositional matrix adjust. Identities = 161/266 (61%), Positives = 196/266 (74%), Gaps = 9/266 (3%) Query 1 VADRLNVAERLAEGRPAAEHTQSYVRACHLVGYQHPDLTAYPAQIHDWYGSEDGLDLHAL 60 +ADRL+VA RLAEGR EHTQ+YV+ACH +GYQHPDLTA+PAQ+ +WY EDGLDL AL Sbjct 1 MADRLDVAGRLAEGRAGVEHTQTYVQACHALGYQHPDLTAHPAQVREWYAGEDGLDLRAL 60 Query 61 DADCAQLRAAASVLMEALRMERSQVAVLAAAWTGSGADAAVHFVQRHCETGNSVVTEVRA 120 D DCA+LRAA V EALR++R+QVA LA AWTG+G +AAV +QRHC+T ++ TE+RA Sbjct 61 DRDCAELRAAGVVAAEALRLQRAQVAELAVAWTGAGGEAAVQLLQRHCDTAEALATELRA 120 Query 121 AAQRCESLRDNLWQLVDSKVATAIAIDERALAQRPAWLAAAEALTTEGADRPTAVEVVRQ 180 AAQRCESLRDNLW L+D+K ATAIA+D+R AQRP WLAAA A+T DR A V+RQ Sbjct 121 AAQRCESLRDNLWYLIDAKAATAIAVDDRTRAQRPEWLAAAAAVTAGQPDRDDAHNVIRQ 180 Query 181 QIQPYVDDDVRNDWLTTMRSTTAGVAASYDAVTDQLASAPRAHFEIPDDLGPGRQPSPAS 240 Q+ PYVD+D+RN+WLT MRS T GV SY V D++A+AP A FE P DLG G P PA+ Sbjct 181 QVIPYVDNDIRNEWLTAMRSATDGVQTSYAMVVDRMAAAPAARFEFPGDLGSGLVPVPAT 240 Query 241 VPAQPSATAAITPAAALPPPDPVPAV 266 P AA +PP D P + Sbjct 241 RP---------LVAAPMPPLDAAPTL 257 >gi|118616643|ref|YP_904975.1| hypothetical protein MUL_0868 [Mycobacterium ulcerans Agy99] gi|118568753|gb|ABL03504.1| conserved hypothetical protein [Mycobacterium ulcerans Agy99] Length=465 Score = 315 bits (807), Expect = 1e-83, Method: Compositional matrix adjust. Identities = 228/483 (48%), Positives = 279/483 (58%), Gaps = 34/483 (7%) Query 1 VADRLNVAERLAEGRPAAEHTQSYVRACHLVGYQHPDLTAYPAQIHDWYGSEDGLDLHAL 60 + + L VA+RL EGRPA +HT+ Y+RAC +GYQ P L I D Y SEDGLDL+ L Sbjct 1 MTNGLAVAQRLDEGRPAVDHTRRYLRACQQLGYQDPFLAKGFDPIGDRYDSEDGLDLYLL 60 Query 61 DADCAQLRAAASVLMEALRMERSQVAVLAAAWTGSGADAAVHFVQRHCETGNSVVTEVRA 120 D DCA+LRAA + + EAL M+R QV LA AWTG GADAAV+F+QRH E G +V EVRA Sbjct 61 DGDCARLRAAGATIAEALGMQRGQVGALAMAWTGPGADAAVNFLQRHVEAGQRIVAEVRA 120 Query 121 AAQRCESLRDNLWQLVDSKVATAIAIDERALAQRPAWLAAAEALTTEGADRPTAVEVVRQ 180 AA CESLR++LW+LVD KV + IAID+R LA+RPAWLAA + A A E+VR Sbjct 121 AALGCESLREDLWRLVDMKVESVIAIDDRTLARRPAWLAACAEVGGGAAPGSAAAELVRH 180 Query 181 QIQPYVDDDVRNDWLTTMRSTTAGVAASYDAVTDQLASAPRAHFEIPDDLGPGRQPSPAS 240 QI PY+D+D+R+DWL MR+ TAG+ A+Y + D+L S+ F+ PDDLG GRQ P Sbjct 181 QINPYLDNDIRDDWLGAMRAATAGIGAAYTTLADRLTSSVPVSFDHPDDLGSGRQSPPVP 240 Query 241 VPAQPSATAAITPAAALPPPDPVPAVTSRPVTPSDFGSAPGDGSATPAGVGSAGGF---- 296 A AA T A A P PA + P P+ APG G P G G Sbjct 241 SALAAIAPAAATSAPAPDPE---PAFAASPAVPAGIAPAPGAGLELPTDAGDFGALGDFG 297 Query 297 -GDAGGTGGLGGFAGLAGLANRIVDAVDSLLGSVAEQLGDPLAADNPPGAVDPFAEDAAD 355 G G GG GLAGLA RIVDA+ LLG+ A + DPL G+VDP Sbjct 298 GPGGLGAAGTGGLGGLAGLAGRIVDALAELLGTAAVPIADPL------GSVDPADGGDRS 351 Query 356 NADDGDDAHPEEADEAAEPKEATEPDEADEVDD-------ADESVPAERAQDVAEEATLP 408 AD DD E E+ +P ATE +DE D AD S P A D AE + +P Sbjct 352 GADAVDDVGDENPSESRKPDAATETGASDEKSDDGEAPEAADGSPPGAPAGDGAERSAMP 411 Query 409 --PVAEPPPP--AAPPVAEPPPPVAAPAPPGAPEPANGPSPEALSEGATPCEIAADELPQ 464 A P P AA PVA+PP AP P +G +P E ++PCEIAADELP+ Sbjct 412 IGEQARTPVPEGAATPVAQPPRVPEAP-------PHDGSAPA--GEASSPCEIAADELPK 462 Query 465 AGP 467 AGP Sbjct 463 AGP 465 >gi|342861886|ref|ZP_08718531.1| hypothetical protein MCOL_23470 [Mycobacterium colombiense CECT 3035] gi|342130703|gb|EGT84007.1| hypothetical protein MCOL_23470 [Mycobacterium colombiense CECT 3035] Length=457 Score = 311 bits (797), Expect = 2e-82, Method: Compositional matrix adjust. Identities = 153/236 (65%), Positives = 184/236 (78%), Gaps = 2/236 (0%) Query 1 VADRLNVAERLAEGRPAAEHTQSYVRACHLVGYQHPDLTAYPAQIHDWYGSEDGLDLHAL 60 +ADRL+VA RLAEGR A EHTQ+YV+ACH +GYQ+PDLT YPAQ+ + Y +E+GLDL AL Sbjct 1 MADRLDVAARLAEGRAAVEHTQAYVQACHALGYQNPDLTTYPAQVRELYAAENGLDLRAL 60 Query 61 DADCAQLRAAASVLMEALRMERSQVAVLAAAWTGSGADAAVHFVQRHCETGNSVVTEVRA 120 D DCA+LRAA V EALRM+R+QVA LAA WTG G DAAV +QRHC+T ++V TE+RA Sbjct 61 DRDCAELRAAGVVAAEALRMQRAQVAELAAVWTGPGGDAAVQLLQRHCDTADAVATELRA 120 Query 121 AAQRCESLRDNLWQLVDSKVATAIAIDERALAQRPAWLAAAEALTTEGADRPTAVEVVRQ 180 AAQRCESLRDNLW LVDS+VATAIA+D+R AQR AWL AA A+T DR A +VVR+ Sbjct 121 AAQRCESLRDNLWYLVDSEVATAIAVDDRVRAQRVAWLPAAAAVT--AGDRDRAADVVRE 178 Query 181 QIQPYVDDDVRNDWLTTMRSTTAGVAASYDAVTDQLASAPRAHFEIPDDLGPGRQP 236 Q+ PYVD+D+RNDWLT MRST+ GV SY V D++ + P A FE P DLG G P Sbjct 179 QVMPYVDNDIRNDWLTAMRSTSDGVETSYAMVIDKMTAVPTACFEFPGDLGAGVVP 234 >gi|183981130|ref|YP_001849421.1| hypothetical protein MMAR_1110 [Mycobacterium marinum M] gi|183174456|gb|ACC39566.1| conserved hypothetical protein [Mycobacterium marinum M] Length=465 Score = 311 bits (797), Expect = 2e-82, Method: Compositional matrix adjust. Identities = 222/477 (47%), Positives = 279/477 (59%), Gaps = 22/477 (4%) Query 1 VADRLNVAERLAEGRPAAEHTQSYVRACHLVGYQHPDLTAYPAQIHDWYGSEDGLDLHAL 60 + + L VA+RL EGRPA +HT+ Y+RAC +GYQ P L I D Y SEDGLDL+ L Sbjct 1 MTNGLAVAQRLDEGRPAVDHTRRYLRACQQLGYQDPVLAKGFDPIGDRYDSEDGLDLYLL 60 Query 61 DADCAQLRAAASVLMEALRMERSQVAVLAAAWTGSGADAAVHFVQRHCETGNSVVTEVRA 120 D DCA+LRAA + + EAL M+R QV LA AWTG GADAAV+F+QRH E G +V EVRA Sbjct 61 DGDCARLRAAGATIAEALGMQRGQVGALAMAWTGPGADAAVNFLQRHVEAGQRIVAEVRA 120 Query 121 AAQRCESLRDNLWQLVDSKVATAIAIDERALAQRPAWLAAAEALTTEGADRPTAVEVVRQ 180 AA CESLR++LW+LVD+KV + IAID+R LA+RPAWLAA + A A E+VR Sbjct 121 AALGCESLREDLWRLVDTKVESVIAIDDRTLARRPAWLAACAEVGAGAAPGSAAAELVRH 180 Query 181 QIQPYVDDDVRNDWLTTMRSTTAGVAASYDAVTDQLASAPRAHFEIPDDLGPGRQPSPAS 240 QI PY+D+D+R+DWL MR+ TAG+ A+Y + D+L S+ F+ PDDLG G Q P Sbjct 181 QINPYLDNDIRDDWLGAMRAATAGIGAAYTTLADRLTSSVPVSFDHPDDLGSGPQSPPVP 240 Query 241 VPAQPSATAAITPAAALPPPDPVPAVTSRPVTPSDFGSAPGDGSATPAGVGSAGGF---- 296 A AA T A A P PA + P P+ APG G P G G Sbjct 241 SALAAIAPAAATSAPAPDPE---PAFAASPAVPAGIAPAPGAGLELPTDAGDFGALGDFG 297 Query 297 -GDAGGTGGLGGFAGLAGLANRIVDAVDSLLGSVAEQLGDPLAADNPPGAVDPFAEDAAD 355 G G GG GLAGLA RIVDA+ LLG+ A + DPL + +P D DA D Sbjct 298 GPGGLGAAGTGGLGGLAGLAGRIVDALAELLGTAAVPIADPLGSVDPADGGDRSGADAVD 357 Query 356 NADDGDDAHPEEADEAAEPKEATEPDEADEV-DDADESVPAERAQDVAEEATLP--PVAE 412 + D + + P + D A E + E + E + AD S P A D AE + +P A Sbjct 358 DVGDENPSEPRKPDAATETGASDEKSDNGEAPEAADGSPPGAPAGDGAERSAMPIGEQAR 417 Query 413 PPPP--AAPPVAEPPPPVAAPAPPGAPEPANGPSPEALSEGATPCEIAADELPQAGP 467 P P AA PVA+PP AP P +G +P E ++PCEIAADELP+AGP Sbjct 418 TPVPEGAATPVAQPPRVPEAP-------PHDGSAPA--GEASSPCEIAADELPKAGP 465 >gi|254821789|ref|ZP_05226790.1| hypothetical protein MintA_17787 [Mycobacterium intracellulare ATCC 13950] Length=240 Score = 303 bits (777), Expect = 3e-80, Method: Compositional matrix adjust. Identities = 158/236 (67%), Positives = 185/236 (79%), Gaps = 2/236 (0%) Query 1 VADRLNVAERLAEGRPAAEHTQSYVRACHLVGYQHPDLTAYPAQIHDWYGSEDGLDLHAL 60 +ADRL+V RLAEGR A EHTQ+YV A H +GYQHPDLTA+PAQI +WY SEDGLDL AL Sbjct 1 MADRLDVDARLAEGRVAIEHTQTYVLASHALGYQHPDLTAHPAQIREWYASEDGLDLRAL 60 Query 61 DADCAQLRAAASVLMEALRMERSQVAVLAAAWTGSGADAAVHFVQRHCETGNSVVTEVRA 120 D DCA+LRAA V EALRM+R+QVA LAAAW G+G DAAV +QRHC++ ++VV E+RA Sbjct 61 DRDCAELRAAGVVAAEALRMQRAQVAELAAAWQGAGGDAAVQLLQRHCDSADAVVGELRA 120 Query 121 AAQRCESLRDNLWQLVDSKVATAIAIDERALAQRPAWLAAAEALTTEGADRPTAVEVVRQ 180 AAQRCESLRDNLW LVDSKVATAIA+D+RA AQRPAWLAAA +T D A +VVR+ Sbjct 121 AAQRCESLRDNLWHLVDSKVATAIAVDDRAQAQRPAWLAAAAKVT--AGDPRGAEDVVRE 178 Query 181 QIQPYVDDDVRNDWLTTMRSTTAGVAASYDAVTDQLASAPRAHFEIPDDLGPGRQP 236 Q+ PYVD+D+RNDWL MRST+ GV SY V D+ A+AP A FE P DLG G P Sbjct 179 QVIPYVDNDIRNDWLAAMRSTSDGVQTSYAMVIDRAAAAPAARFEFPGDLGEGVVP 234 >gi|289763619|ref|ZP_06522997.1| predicted protein [Mycobacterium tuberculosis GM 1503] gi|289711125|gb|EFD75141.1| predicted protein [Mycobacterium tuberculosis GM 1503] Length=154 Score = 276 bits (707), Expect = 4e-72, Method: Compositional matrix adjust. Identities = 152/154 (99%), Positives = 153/154 (99%), Gaps = 0/154 (0%) Query 314 LANRIVDAVDSLLGSVAEQLGDPLAADNPPGAVDPFAEDAADNADDGDDAHPEEADEAAE 373 + NRIVDAVDSLLGSVAEQLGDPLAADNPPGAVDPFAEDAADNADDGDDAHPEEADEAAE Sbjct 1 MPNRIVDAVDSLLGSVAEQLGDPLAADNPPGAVDPFAEDAADNADDGDDAHPEEADEAAE 60 Query 374 PKEATEPDEADEVDDADESVPAERAQDVAEEATLPPVAEPPPPAAPPVAEPPPPVAAPAP 433 PKEATEPDEADEVDDADESVPAERAQDVAEEATLPPVAEPPPPAAPPVAEPPPPVAAPAP Sbjct 61 PKEATEPDEADEVDDADESVPAERAQDVAEEATLPPVAEPPPPAAPPVAEPPPPVAAPAP 120 Query 434 PGAPEPANGPSPEALSEGATPCEIAADELPQAGP 467 PGAPEPANGPSPEALSEGATPCEIAADELPQAGP Sbjct 121 PGAPEPANGPSPEALSEGATPCEIAADELPQAGP 154 >gi|298526923|ref|ZP_07014332.1| predicted protein [Mycobacterium tuberculosis 94_M4241A] gi|298496717|gb|EFI32011.1| predicted protein [Mycobacterium tuberculosis 94_M4241A] Length=148 Score = 235 bits (600), Expect = 1e-59, Method: Compositional matrix adjust. Identities = 133/135 (99%), Positives = 133/135 (99%), Gaps = 0/135 (0%) Query 333 LGDPLAADNPPGAVDPFAEDAADNADDGDDAHPEEADEAAEPKEATEPDEADEVDDADES 392 G PLAADNPPGAVDPFAEDAADNADDGDDAHPEEADEAAEPKEATEPDEADEVDDADES Sbjct 14 WGIPLAADNPPGAVDPFAEDAADNADDGDDAHPEEADEAAEPKEATEPDEADEVDDADES 73 Query 393 VPAERAQDVAEEATLPPVAEPPPPAAPPVAEPPPPVAAPAPPGAPEPANGPSPEALSEGA 452 VPAERAQDVAEEATLPPVAEPPPPAAPPVAEPPPPVAAPAPPGAPEPANGPSPEALSEGA Sbjct 74 VPAERAQDVAEEATLPPVAEPPPPAAPPVAEPPPPVAAPAPPGAPEPANGPSPEALSEGA 133 Query 453 TPCEIAADELPQAGP 467 TPCEIAADELPQAGP Sbjct 134 TPCEIAADELPQAGP 148 >gi|41410347|ref|NP_963183.1| hypothetical protein MAP4249 [Mycobacterium avium subsp. paratuberculosis K-10] gi|41399181|gb|AAS06799.1| hypothetical protein MAP_4249 [Mycobacterium avium subsp. paratuberculosis K-10] Length=461 Score = 228 bits (581), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 154/325 (48%), Positives = 186/325 (58%), Gaps = 26/325 (8%) Query 58 HALDADCAQLRAAASVLMEALRMERSQVAVLAAAWTGSGADAAVHFVQRHCETGNSVVTE 117 ALD DCA+LRAA V EALR++R+QVA LA AWTG+G +AAV +QRHC+T ++ TE Sbjct 32 RALDRDCAELRAAGVVAAEALRLQRAQVAELAVAWTGAGGEAAVQLLQRHCDTAEALATE 91 Query 118 VRAAAQRCESLRDNLWQLVDSKVATAIAIDERALAQRPAWLAAAEALTTEGADRPTAVEV 177 +RAAAQRCESLRDNLW L+D+K ATAIA+D+R AQRP WLAAA A+T DR A + Sbjct 92 LRAAAQRCESLRDNLWYLIDAKAATAIAVDDRTRAQRPEWLAAAAAVTAGQPDRDDAHNL 151 Query 178 VRQQIQPYVDDDVRNDWLTTMRSTTAGVAASYDAVTDQLASAPRAHFEIPDDLGPGRQPS 237 +RQQ+ PYVD+D+RN+WL MRS T GV SY V D++A+AP A FE P DLG G P Sbjct 152 IRQQVIPYVDNDIRNEWLPAMRSATDGVQTSYAMVVDRMAAAPAARFEFPGDLGSGLVPV 211 Query 238 PASVPAQPSATAAITPAAALPPPDPVPAVTSRPVTPSDFGSAPGDGSATPAGVGSAGGFG 297 PA+ P + + A LP P + A A G Sbjct 212 PATRPLVAAPMPPLDAAPTLPDAAPTLPAAVSEPAAAATLPAAVPSPAAAPAADWGAALG 271 Query 298 DAGGT--GGLGGFA----------------GLAGLANRIVDAVDSLLGSVAEQLGDPLAA 339 DA G G LGG A GL GLA +IVDA+ LLGSV GD L Sbjct 272 DAAGMPAGDLGGLAGSGMGSGLGSGLGGGGGLLGLAGKIVDAMGGLLGSV----GDGLDG 327 Query 340 DNPPGAVDPFAEDAADNADDGDDAH 364 +P G DP DNA GD H Sbjct 328 ADPFGDQDPL----DDNAFHGDPFH 348 >gi|333991905|ref|YP_004524519.1| hypothetical protein JDM601_3265 [Mycobacterium sp. JDM601] gi|333487873|gb|AEF37265.1| conserved hypothetical protein [Mycobacterium sp. JDM601] Length=455 Score = 223 bits (569), Expect = 5e-56, Method: Compositional matrix adjust. Identities = 128/232 (56%), Positives = 154/232 (67%), Gaps = 1/232 (0%) Query 1 VADRLNVAERLAEGRPAAEHTQSYVRACHLVGYQHPDLTAYPAQIHDWYGSEDGLDLHAL 60 +A R +VA RLAEGR A HTQ+YV ACH GY HPDLT Y Q+ D Y SE GLDL L Sbjct 1 MAPRYDVAARLAEGREAVAHTQAYVSACHRRGYGHPDLTGYDGQLADRYDSEAGLDLRCL 60 Query 61 DADCAQLRAAASVLMEALRMERSQVAVLAAAWTGSGADAAVHFVQRHCETGNSVVTEVRA 120 DADCA L A A +ALR++R Q+ LAAAW G GADAA FV+RHCE G + +RA Sbjct 61 DADCAALAALAGAAEDALRLQRGQLDALAAAWRGPGADAAAGFVRRHCEAGAQLTARLRA 120 Query 121 AAQRCESLRDNLWQLVDSKVATAIAIDERALAQRPAWLAAAEALTTEGADRPTAVEVVRQ 180 AA CE LRD LW+LVD+KVA A+D+RA A RPAWLAAA A+T+ D A EV+ + Sbjct 121 AATGCEVLRDELWRLVDTKVAAVTAVDDRAGAHRPAWLAAAHAVTSGSGDE-HAAEVIEK 179 Query 181 QIQPYVDDDVRNDWLTTMRSTTAGVAASYDAVTDQLASAPRAHFEIPDDLGP 232 Q+ PYVD+DVR +W+T + S GVA +Y A AP F +P DLGP Sbjct 180 QVIPYVDNDVRGEWVTAVLSVRDGVAGAYRAAVGSADPAPGTVFAVPGDLGP 231 >gi|120402483|ref|YP_952312.1| hypothetical protein Mvan_1474 [Mycobacterium vanbaalenii PYR-1] gi|119955301|gb|ABM12306.1| conserved hypothetical alanine and proline rich protein [Mycobacterium vanbaalenii PYR-1] Length=472 Score = 186 bits (473), Expect = 6e-45, Method: Compositional matrix adjust. Identities = 101/241 (42%), Positives = 144/241 (60%), Gaps = 0/241 (0%) Query 1 VADRLNVAERLAEGRPAAEHTQSYVRACHLVGYQHPDLTAYPAQIHDWYGSEDGLDLHAL 60 +++ + A RLA+GRPA E Q YV A HL+GYQHPDLT + +Q+ DWYG+EDG+DL AL Sbjct 1 MSENFDAASRLAQGRPAVEELQHYVWASHLLGYQHPDLTMHASQVRDWYGTEDGMDLGAL 60 Query 61 DADCAQLRAAASVLMEALRMERSQVAVLAAAWTGSGADAAVHFVQRHCETGNSVVTEVRA 120 DC L AA +AL ++ Q+A L+ W GSG +AA ++RH +V VR Sbjct 61 QRDCLALDAAVRASQDALAVQERQLAQLSVVWHGSGGEAARDLLRRHGAASAAVAAAVRT 120 Query 121 AAQRCESLRDNLWQLVDSKVATAIAIDERALAQRPAWLAAAEALTTEGADRPTAVEVVRQ 180 AA+ +LR++LW+ + +K +A ERA R WLAAA + T DR TA E+V Q Sbjct 121 AAEALTALREDLWKALGAKADATVAGGERAGDSRARWLAAATTVVTGAGDRATASELVEQ 180 Query 181 QIQPYVDDDVRNDWLTTMRSTTAGVAASYDAVTDQLASAPRAHFEIPDDLGPGRQPSPAS 240 +++P+V V DWLT ++ A V+ +Y+ ++A+ F+IP DLGP P S Sbjct 181 EVKPFVAGPVATDWLTAVQQAVASVSTAYERSVAEIAAEQSPVFDIPGDLGPAWTQPPMS 240 Query 241 V 241 Sbjct 241 T 241 >gi|315445874|ref|YP_004078753.1| hypothetical protein Mspyr1_43620 [Mycobacterium sp. Spyr1] gi|315264177|gb|ADU00919.1| hypothetical protein Mspyr1_43620 [Mycobacterium sp. Spyr1] Length=469 Score = 178 bits (452), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 99/230 (44%), Positives = 140/230 (61%), Gaps = 0/230 (0%) Query 3 DRLNVAERLAEGRPAAEHTQSYVRACHLVGYQHPDLTAYPAQIHDWYGSEDGLDLHALDA 62 D +V RLA+GRPAA+ Q YV AC +GY+H DLT +PAQ+ DWYG+EDG+DL AL Sbjct 3 DDFDVGARLAQGRPAADTLQRYVAACRQLGYEHRDLTLHPAQVTDWYGTEDGMDLAALHR 62 Query 63 DCAQLRAAASVLMEALRMERSQVAVLAAAWTGSGADAAVHFVQRHCETGNSVVTEVRAAA 122 C L EAL ++ Q+ L+AAW G+G DAA F+ RH ++ VR AA Sbjct 63 CCVALDGVGRAAQEALAVQERQLGELSAAWEGAGGDAARMFLARHGDSSAVATAAVRTAA 122 Query 123 QRCESLRDNLWQLVDSKVATAIAIDERALAQRPAWLAAAEALTTEGADRPTAVEVVRQQI 182 + SLR+ LW++V KV + ++ + RA + W AAA ++TT D TA E+V + Sbjct 123 EALVSLREELWRVVGGKVDSTVSAEGRAAGTQAQWSAAATSVTTGTGDTATAGEIVEHAV 182 Query 183 QPYVDDDVRNDWLTTMRSTTAGVAASYDAVTDQLASAPRAHFEIPDDLGP 232 +P+VD +R++WL MR A V A+YD T ++A+ F++P DLGP Sbjct 183 KPFVDTVIRDEWLPAMRDAVAAVTAAYDGATAEIAAERTPTFDVPGDLGP 232 >gi|145225521|ref|YP_001136199.1| hypothetical protein Mflv_4945 [Mycobacterium gilvum PYR-GCK] gi|145218007|gb|ABP47411.1| hypothetical protein Mflv_4945 [Mycobacterium gilvum PYR-GCK] Length=463 Score = 176 bits (447), Expect = 5e-42, Method: Compositional matrix adjust. Identities = 98/230 (43%), Positives = 140/230 (61%), Gaps = 0/230 (0%) Query 3 DRLNVAERLAEGRPAAEHTQSYVRACHLVGYQHPDLTAYPAQIHDWYGSEDGLDLHALDA 62 D +V RLA+GRPAA+ Q YV AC +GY+H DLT +PAQ+ DWYG+EDG+DL AL Sbjct 3 DDFDVGARLAQGRPAADTLQRYVAACRQLGYEHRDLTLHPAQVTDWYGTEDGMDLAALHR 62 Query 63 DCAQLRAAASVLMEALRMERSQVAVLAAAWTGSGADAAVHFVQRHCETGNSVVTEVRAAA 122 C L EAL ++ Q+ L+AAW G+G DAA F+ RH ++ VR AA Sbjct 63 CCVALDGVGRAAQEALAVQERQLGELSAAWEGAGGDAARMFLARHGDSSAVATAAVRTAA 122 Query 123 QRCESLRDNLWQLVDSKVATAIAIDERALAQRPAWLAAAEALTTEGADRPTAVEVVRQQI 182 + SLR+ LW++V KV + ++ + RA + W AAA ++TT D TA E+V + Sbjct 123 EALVSLREELWRVVGGKVDSTVSAEGRAAGAQAQWSAAATSVTTGTGDTATAGEIVEHAV 182 Query 183 QPYVDDDVRNDWLTTMRSTTAGVAASYDAVTDQLASAPRAHFEIPDDLGP 232 +P+VD +R++WL M+ A V A+YD T ++A+ F++P DLGP Sbjct 183 KPFVDTVIRDEWLPAMQDAVAAVTAAYDGATAEIAAERTPTFDVPGDLGP 232 >gi|167966888|ref|ZP_02549165.1| conserved alanine and proline rich protein [Mycobacterium tuberculosis H37Ra] Length=197 Score = 168 bits (425), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 162/174 (94%), Positives = 164/174 (95%), Gaps = 0/174 (0%) Query 199 RSTTAGVAASYDAVTDQLASAPRAHFEIPDDLGPGRQPSPASVPAQPSATAAITPAAALP 258 RST AGVAASYDAVTDQLA APRAH EIPDDL P R SPASVPA PSATAAITPAAALP Sbjct 1 RSTAAGVAASYDAVTDQLARAPRAHVEIPDDLRPRRHRSPASVPAHPSATAAITPAAALP 60 Query 259 PPDPVPAVTSRPVTPSDFGSAPGDGSATPAGVGSAGGFGDAGGTGGLGGFAGLAGLANRI 318 PPDPVPAVTSRPVTPSDFGSAPGDGSATPAGVGSAGGFGDAGGTGGLGGFAGLAGLANRI Sbjct 61 PPDPVPAVTSRPVTPSDFGSAPGDGSATPAGVGSAGGFGDAGGTGGLGGFAGLAGLANRI 120 Query 319 VDAVDSLLGSVAEQLGDPLAADNPPGAVDPFAEDAADNADDGDDAHPEEADEAA 372 VDAVDSLLGSVAEQLGDPLAADNPPGAVDPFAEDAADNADDGDDAHPEEA+ + Sbjct 121 VDAVDSLLGSVAEQLGDPLAADNPPGAVDPFAEDAADNADDGDDAHPEEAERGS 174 >gi|108798108|ref|YP_638305.1| hypothetical protein Mmcs_1136 [Mycobacterium sp. MCS] gi|119867204|ref|YP_937156.1| hypothetical protein Mkms_1153 [Mycobacterium sp. KMS] gi|126433766|ref|YP_001069457.1| hypothetical protein Mjls_1163 [Mycobacterium sp. JLS] gi|108768527|gb|ABG07249.1| conserved hypothetical alanine and proline rich protein [Mycobacterium sp. MCS] gi|119693293|gb|ABL90366.1| conserved hypothetical alanine and proline rich protein [Mycobacterium sp. KMS] gi|126233566|gb|ABN96966.1| hypothetical protein Mjls_1163 [Mycobacterium sp. JLS] Length=429 Score = 144 bits (364), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 102/239 (43%), Positives = 137/239 (58%), Gaps = 14/239 (5%) Query 1 VADRLNVAERLAEGRPAAEHTQSYVRACHLVGYQHPDLTAYPAQIHDWYGSEDGLDLHAL 60 +A +VA RLAEGRPA + YV AC ++G L Q Y SE GLDL+AL Sbjct 1 MAGTFDVAGRLAEGRPAVDDFTRYVSACQVLGTCGHGLNDRLEQA---YASEAGLDLYAL 57 Query 61 DADCAQLRAAASVLMEALRMERSQVAVLAAAWTGSGADAAVHFVQRHCETGNSVVTEVRA 120 DAD A LRAA + + EA ++ +Q+ L+AAWTG+GADAA F+ RH VT + Sbjct 58 DADHAALRAAVAAVREAQELQDAQLNALSAAWTGTGADAAAEFLHRHSAASAQAVTALST 117 Query 121 AAQRCESLRDNLWQLVDSKVATAIAIDERALAQRPAWLAAAEALTTEGADRPTAVEVVRQ 180 AA++ +LRD LW++VD+KVA A A+D R R W AAAE +TT D+ TA E+V Sbjct 118 AAEQVGALRDELWRIVDAKVAAAEAVDARTAGVRGEWRAAAETVTTGVGDQATASELVDA 177 Query 181 QIQPYVDDDVRNDWLTTMRSTTAGVAASYDAVTDQLASAPRAHFEIPDDLGPGRQPSPA 239 + P+V+ DVR +W+ M + +A VA +D T + S GP R P PA Sbjct 178 HVAPFVEQDVRAEWVAAMEAASAAVAQCFDTATTAVRSE-----------GPPRFPEPA 225 >gi|167966889|ref|ZP_02549166.1| hypothetical protein MtubH3_02025 [Mycobacterium tuberculosis H37Ra] Length=75 Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 74/75 (99%), Positives = 75/75 (100%), Gaps = 0/75 (0%) Query 393 VPAERAQDVAEEATLPPVAEPPPPAAPPVAEPPPPVAAPAPPGAPEPANGPSPEALSEGA 452 +PAERAQDVAEEATLPPVAEPPPPAAPPVAEPPPPVAAPAPPGAPEPANGPSPEALSEGA Sbjct 1 MPAERAQDVAEEATLPPVAEPPPPAAPPVAEPPPPVAAPAPPGAPEPANGPSPEALSEGA 60 Query 453 TPCEIAADELPQAGP 467 TPCEIAADELPQAGP Sbjct 61 TPCEIAADELPQAGP 75 >gi|169630825|ref|YP_001704474.1| hypothetical protein MAB_3746c [Mycobacterium abscessus ATCC 19977] gi|169242792|emb|CAM63820.1| Conserved hypothetical protein [Mycobacterium abscessus] Length=546 Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 59/233 (26%), Positives = 105/233 (46%), Gaps = 7/233 (3%) Query 1 VADRLNVAERLAEGRPAAEHTQSYVRACHL------VGYQHPDLTAYPAQIHDWYGSEDG 54 +A++ ++ EG A ++Q+YV A V +PDLTA Q+ DWY + G Sbjct 1 MANKWDIEALRGEGLQAIANSQNYVTAAIRGNGKSPVTITNPDLTANERQLFDWYDMDAG 60 Query 55 LDLHALDADCAQLRAAASVLMEALRMERSQVAVLAAAWTGSGADAAVHFVQRHCETGNSV 114 +DL+ L D + A + + A + Q+ L W G G+++A F++ H T ++V Sbjct 61 MDLNTLGGDLELFKNATATMKAAAERQHGQLQRLIGLWEGKGSESANDFLKTHNSTADAV 120 Query 115 VTEVRAAAQRCESLRDNLWQLVDSKVATAIAIDERALAQRPAWLAAAEALTTEGADRPTA 174 E + + LR+ LW +VD K + +D + R + +A T D+ A Sbjct 121 TDEFGKVSTGLDGLRNALWNIVDLKKQASTMVD-GLVTDRTHFDSAVATYKTGMGDKSQA 179 Query 175 VEVVRQQIQPYVDDDVRNDWLTTMRSTTAGVAASYDAVTDQLASAPRAHFEIP 227 E I P+V +++ L + + +YD + + L F++P Sbjct 180 DETNATMIGPHVKNNIEGQLLPAFKKAWSAGGGAYDTLINGLKQELPPDFKLP 232 >gi|467105|gb|AAA17287.1| B229_C1_154 [Mycobacterium leprae] Length=103 Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 42/73 (58%), Positives = 52/73 (72%), Gaps = 1/73 (1%) Query 121 AAQRCESLRDNLWQLVDSKVATAIAIDERALAQRPAWLAAAEALTTEGADRPTAVEVVRQ 180 AAQRC SLRDNLW L+ SK+A I +D+R + R LA A A+T DR TA E+V Q Sbjct 32 AAQRCGSLRDNLWHLLGSKIAAVIVVDDRYYS-RLVGLATAGAVTIGAGDRSTADELVHQ 90 Query 181 QIQPYVDDDVRND 193 +IQPYVD+D+RND Sbjct 91 KIQPYVDNDIRND 103 Lambda K H 0.310 0.128 0.381 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 985619960136 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40