BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv3442c
Length=151
Score E
Sequences producing significant alignments: (Bits) Value
gi|15610578|ref|NP_217959.1| 30S ribosomal protein S9 [Mycobacte... 301 2e-80
gi|289445043|ref|ZP_06434787.1| 30S ribosomal protein S9 rpsI [M... 300 6e-80
gi|240167800|ref|ZP_04746459.1| 30S ribosomal protein S9 [Mycoba... 260 4e-68
gi|118466344|ref|YP_883520.1| 30S ribosomal protein S9 [Mycobact... 258 2e-67
gi|41410344|ref|NP_963180.1| 30S ribosomal protein S9 [Mycobacte... 256 1e-66
gi|254821786|ref|ZP_05226787.1| 30S ribosomal protein S9 [Mycoba... 254 3e-66
gi|296165847|ref|ZP_06848337.1| 30S ribosomal protein S9 [Mycoba... 253 5e-66
gi|183981127|ref|YP_001849418.1| ribosomal protein S9, RpsI [Myc... 250 4e-65
gi|15827098|ref|NP_301361.1| 30S ribosomal protein S9 [Mycobacte... 249 7e-65
gi|118616640|ref|YP_904972.1| 30S ribosomal protein S9 [Mycobact... 248 2e-64
gi|118468477|ref|YP_885937.1| 30S ribosomal protein S9 [Mycobact... 241 2e-62
gi|145225525|ref|YP_001136203.1| 30S ribosomal protein S9 [Mycob... 241 3e-62
gi|120402479|ref|YP_952308.1| 30S ribosomal protein S9 [Mycobact... 240 5e-62
gi|108798103|ref|YP_638300.1| 30S ribosomal protein S9 [Mycobact... 239 1e-61
gi|342861883|ref|ZP_08718528.1| 30S ribosomal protein S9 [Mycoba... 239 1e-61
gi|336441182|gb|AEI54816.1| 30S ribosomal protein S9 [Mycobacter... 238 3e-61
gi|336441186|gb|AEI54818.1| 30S ribosomal protein S9 [Mycobacter... 237 4e-61
gi|336441184|gb|AEI54817.1| 30S ribosomal protein S9 [Mycobacter... 237 5e-61
gi|336441190|gb|AEI54820.1| 30S ribosomal protein S9 [Mycobacter... 237 5e-61
gi|169630830|ref|YP_001704479.1| 30s ribosomal protein S9 [Mycob... 237 5e-61
gi|336441188|gb|AEI54819.1| 30S ribosomal protein S9 [Mycobacter... 234 4e-60
gi|326381864|ref|ZP_08203557.1| 30S ribosomal protein S9 [Gordon... 234 5e-60
gi|262201641|ref|YP_003272849.1| 30S ribosomal protein S9 [Gordo... 231 2e-59
gi|54022834|ref|YP_117076.1| 30S ribosomal protein S9 [Nocardia ... 231 2e-59
gi|296138600|ref|YP_003645843.1| 30S ribosomal protein S9 [Tsuka... 228 2e-58
gi|343925126|ref|ZP_08764658.1| 30S ribosomal protein S9 [Gordon... 228 2e-58
gi|111023134|ref|YP_706106.1| 30S ribosomal protein S9 [Rhodococ... 228 3e-58
gi|226365640|ref|YP_002783423.1| 30S ribosomal protein S9 [Rhodo... 227 4e-58
gi|312140873|ref|YP_004008209.1| 30S ribosomal protein s9 rpsi [... 225 2e-57
gi|226305394|ref|YP_002765352.1| 30S ribosomal protein S9 [Rhodo... 221 3e-56
gi|333921703|ref|YP_004495284.1| 30S ribosomal protein S9 [Amyco... 221 4e-56
gi|229489395|ref|ZP_04383258.1| ribosomal protein S9 [Rhodococcu... 220 4e-56
gi|291003847|ref|ZP_06561820.1| 30S ribosomal protein S9 [Saccha... 211 2e-53
gi|333991908|ref|YP_004524522.1| 30S ribosomal protein S9 RpsI [... 211 3e-53
gi|300782658|ref|YP_003762949.1| 30S ribosomal protein S9 [Amyco... 211 3e-53
gi|134103209|ref|YP_001108870.1| 30S ribosomal protein S9 [Sacch... 211 4e-53
gi|302524042|ref|ZP_07276384.1| ribosomal protein S9 [Streptomyc... 210 6e-53
gi|284992834|ref|YP_003411388.1| 30S ribosomal protein S9 [Geode... 209 1e-52
gi|257054516|ref|YP_003132348.1| 30S ribosomal protein S9P [Sacc... 208 2e-52
gi|331699124|ref|YP_004335363.1| 30S ribosomal protein S9 [Pseud... 207 6e-52
gi|258651417|ref|YP_003200573.1| 30S ribosomal protein S9 [Nakam... 206 6e-52
gi|319948368|ref|ZP_08022510.1| 30S ribosomal protein S9 [Dietzi... 205 2e-51
gi|296392778|ref|YP_003657662.1| 30S ribosomal protein S9 [Segni... 202 9e-51
gi|340795255|ref|YP_004760718.1| 30S ribosomal protein S9 [Coryn... 197 5e-49
gi|68536834|ref|YP_251539.1| 30S ribosomal protein S9 [Corynebac... 196 7e-49
gi|291298449|ref|YP_003509727.1| 30S ribosomal protein S9 [Stack... 196 9e-49
gi|225020503|ref|ZP_03709695.1| hypothetical protein CORMATOL_00... 196 1e-48
gi|336326383|ref|YP_004606349.1| 30S ribosomal protein S9 [Coryn... 196 1e-48
gi|305679646|ref|ZP_07402456.1| ribosomal protein S9 [Corynebact... 194 4e-48
gi|158317759|ref|YP_001510267.1| 30S ribosomal protein S9 [Frank... 192 1e-47
>gi|15610578|ref|NP_217959.1| 30S ribosomal protein S9 [Mycobacterium tuberculosis H37Rv]
gi|15843037|ref|NP_338074.1| 30S ribosomal protein S9 [Mycobacterium tuberculosis CDC1551]
gi|31794619|ref|NP_857112.1| 30S ribosomal protein S9 [Mycobacterium bovis AF2122/97]
77 more sequence titles
Length=151
Score = 301 bits (771), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 151/151 (100%), Positives = 151/151 (100%), Gaps = 0/151 (0%)
Query 1 MTETTPAPQTPAAPAGPAQSFVLERPIQTVGRRKEAVVRVRLVPGTGKFDLNGRSLEDYF 60
MTETTPAPQTPAAPAGPAQSFVLERPIQTVGRRKEAVVRVRLVPGTGKFDLNGRSLEDYF
Sbjct 1 MTETTPAPQTPAAPAGPAQSFVLERPIQTVGRRKEAVVRVRLVPGTGKFDLNGRSLEDYF 60
Query 61 PNKVHQQLIKAPLVTVDRVESFDIFAHLGGGGPSGQAGALRLGIARALILVSPEDRPALK 120
PNKVHQQLIKAPLVTVDRVESFDIFAHLGGGGPSGQAGALRLGIARALILVSPEDRPALK
Sbjct 61 PNKVHQQLIKAPLVTVDRVESFDIFAHLGGGGPSGQAGALRLGIARALILVSPEDRPALK 120
Query 121 KAGFLTRDPRATERKKYGLKKARKAPQYSKR 151
KAGFLTRDPRATERKKYGLKKARKAPQYSKR
Sbjct 121 KAGFLTRDPRATERKKYGLKKARKAPQYSKR 151
>gi|289445043|ref|ZP_06434787.1| 30S ribosomal protein S9 rpsI [Mycobacterium tuberculosis T46]
gi|289571676|ref|ZP_06451903.1| 30S ribosomal protein S9 rpsI [Mycobacterium tuberculosis T17]
gi|289752167|ref|ZP_06511545.1| 30S ribosomal protein S9 rpsI [Mycobacterium tuberculosis T92]
gi|289755575|ref|ZP_06514953.1| 30S ribosomal protein S9 [Mycobacterium tuberculosis EAS054]
gi|289417962|gb|EFD15202.1| 30S ribosomal protein S9 rpsI [Mycobacterium tuberculosis T46]
gi|289545430|gb|EFD49078.1| 30S ribosomal protein S9 rpsI [Mycobacterium tuberculosis T17]
gi|289692754|gb|EFD60183.1| 30S ribosomal protein S9 rpsI [Mycobacterium tuberculosis T92]
gi|289696162|gb|EFD63591.1| 30S ribosomal protein S9 [Mycobacterium tuberculosis EAS054]
Length=151
Score = 300 bits (767), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 150/151 (99%), Positives = 150/151 (99%), Gaps = 0/151 (0%)
Query 1 MTETTPAPQTPAAPAGPAQSFVLERPIQTVGRRKEAVVRVRLVPGTGKFDLNGRSLEDYF 60
MTETTPAPQTPA PAGPAQSFVLERPIQTVGRRKEAVVRVRLVPGTGKFDLNGRSLEDYF
Sbjct 1 MTETTPAPQTPATPAGPAQSFVLERPIQTVGRRKEAVVRVRLVPGTGKFDLNGRSLEDYF 60
Query 61 PNKVHQQLIKAPLVTVDRVESFDIFAHLGGGGPSGQAGALRLGIARALILVSPEDRPALK 120
PNKVHQQLIKAPLVTVDRVESFDIFAHLGGGGPSGQAGALRLGIARALILVSPEDRPALK
Sbjct 61 PNKVHQQLIKAPLVTVDRVESFDIFAHLGGGGPSGQAGALRLGIARALILVSPEDRPALK 120
Query 121 KAGFLTRDPRATERKKYGLKKARKAPQYSKR 151
KAGFLTRDPRATERKKYGLKKARKAPQYSKR
Sbjct 121 KAGFLTRDPRATERKKYGLKKARKAPQYSKR 151
>gi|240167800|ref|ZP_04746459.1| 30S ribosomal protein S9 [Mycobacterium kansasii ATCC 12478]
Length=150
Score = 260 bits (665), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 131/151 (87%), Positives = 137/151 (91%), Gaps = 1/151 (0%)
Query 1 MTETTPAPQTPAAPAGPAQSFVLERPIQTVGRRKEAVVRVRLVPGTGKFDLNGRSLEDYF 60
MTE + AP + P +SFV ERPIQTVGRRKEAVVRVRLVPGTGKFDLNGR+LEDYF
Sbjct 1 MTEISEAPAVESQPVH-HESFVFERPIQTVGRRKEAVVRVRLVPGTGKFDLNGRTLEDYF 59
Query 61 PNKVHQQLIKAPLVTVDRVESFDIFAHLGGGGPSGQAGALRLGIARALILVSPEDRPALK 120
PNKVHQQLIKAPLVTVDRVES+DIFAHL GGGPSGQAGALRLGIARALIL +PEDRP LK
Sbjct 60 PNKVHQQLIKAPLVTVDRVESYDIFAHLNGGGPSGQAGALRLGIARALILANPEDRPPLK 119
Query 121 KAGFLTRDPRATERKKYGLKKARKAPQYSKR 151
KAGFLTRDPRATERKKYGLKKARKAPQYSKR
Sbjct 120 KAGFLTRDPRATERKKYGLKKARKAPQYSKR 150
>gi|118466344|ref|YP_883520.1| 30S ribosomal protein S9 [Mycobacterium avium 104]
gi|254776815|ref|ZP_05218331.1| 30S ribosomal protein S9 [Mycobacterium avium subsp. avium ATCC
25291]
gi|166229572|sp|A0QKT2.1|RS9_MYCA1 RecName: Full=30S ribosomal protein S9
gi|118167631|gb|ABK68528.1| ribosomal protein S9 [Mycobacterium avium 104]
Length=166
Score = 258 bits (660), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 133/166 (81%), Positives = 141/166 (85%), Gaps = 15/166 (9%)
Query 1 MTETTPAPQTPAAP---------------AGPAQSFVLERPIQTVGRRKEAVVRVRLVPG 45
MTETT A + P P A PA+S+V ERPIQTVGRRKEAVVRVRLVPG
Sbjct 1 MTETTEALENPDNPDAETAAAEVTEAPVEAVPAESYVFERPIQTVGRRKEAVVRVRLVPG 60
Query 46 TGKFDLNGRSLEDYFPNKVHQQLIKAPLVTVDRVESFDIFAHLGGGGPSGQAGALRLGIA 105
TGKF+LNGR+LE YFPNKVHQQLIKAPLVTVDRV+SFDI+AHL GGGPSGQAGALRLGIA
Sbjct 61 TGKFNLNGRTLEGYFPNKVHQQLIKAPLVTVDRVDSFDIYAHLHGGGPSGQAGALRLGIA 120
Query 106 RALILVSPEDRPALKKAGFLTRDPRATERKKYGLKKARKAPQYSKR 151
RALIL SP+DRPALKKAGFLTRDPRATERKKYGLKKARKAPQYSKR
Sbjct 121 RALILASPDDRPALKKAGFLTRDPRATERKKYGLKKARKAPQYSKR 166
>gi|41410344|ref|NP_963180.1| 30S ribosomal protein S9 [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|81700270|sp|Q73S30.1|RS9_MYCPA RecName: Full=30S ribosomal protein S9
gi|41399178|gb|AAS06796.1| RpsI [Mycobacterium avium subsp. paratuberculosis K-10]
gi|336460691|gb|EGO39581.1| ribosomal protein S9 [Mycobacterium avium subsp. paratuberculosis
S397]
Length=166
Score = 256 bits (653), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 131/166 (79%), Positives = 140/166 (85%), Gaps = 15/166 (9%)
Query 1 MTETTPAPQTPAAP---------------AGPAQSFVLERPIQTVGRRKEAVVRVRLVPG 45
MTETT A + P P A PA+S+V ERPIQTVGRRKEAVVRVRLVPG
Sbjct 1 MTETTEALENPDNPEAETAAAEVTEAPVEAVPAESYVFERPIQTVGRRKEAVVRVRLVPG 60
Query 46 TGKFDLNGRSLEDYFPNKVHQQLIKAPLVTVDRVESFDIFAHLGGGGPSGQAGALRLGIA 105
TGKF+LNGR+LE YFPNKVHQQL+KAPLVTVDRV+ FDI+AHL GGGPSGQAGALRLGIA
Sbjct 61 TGKFNLNGRTLEGYFPNKVHQQLVKAPLVTVDRVDGFDIYAHLHGGGPSGQAGALRLGIA 120
Query 106 RALILVSPEDRPALKKAGFLTRDPRATERKKYGLKKARKAPQYSKR 151
RALIL SP+DRPALKKAGFLTRDPRATERKKYGLKKARKAPQYSKR
Sbjct 121 RALILASPDDRPALKKAGFLTRDPRATERKKYGLKKARKAPQYSKR 166
>gi|254821786|ref|ZP_05226787.1| 30S ribosomal protein S9 [Mycobacterium intracellulare ATCC 13950]
Length=179
Score = 254 bits (650), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 128/152 (85%), Positives = 137/152 (91%), Gaps = 3/152 (1%)
Query 3 ETTPAP---QTPAAPAGPAQSFVLERPIQTVGRRKEAVVRVRLVPGTGKFDLNGRSLEDY 59
E T AP PA A PA+ +V ERPIQTVGRRKEAVVRVRLVPGTG+F+LNGR+LE Y
Sbjct 28 EVTEAPVEASEPADVAAPAEPYVFERPIQTVGRRKEAVVRVRLVPGTGQFNLNGRTLEGY 87
Query 60 FPNKVHQQLIKAPLVTVDRVESFDIFAHLGGGGPSGQAGALRLGIARALILVSPEDRPAL 119
FPNKVHQQLIKAPLVTVDRVESFD++AHL GGGPSGQAGALRLGIARALI+ SP+DRPAL
Sbjct 88 FPNKVHQQLIKAPLVTVDRVESFDVYAHLHGGGPSGQAGALRLGIARALIVASPDDRPAL 147
Query 120 KKAGFLTRDPRATERKKYGLKKARKAPQYSKR 151
KKAGFLTRDPRATERKKYGLKKARKAPQYSKR
Sbjct 148 KKAGFLTRDPRATERKKYGLKKARKAPQYSKR 179
>gi|296165847|ref|ZP_06848337.1| 30S ribosomal protein S9 [Mycobacterium parascrofulaceum ATCC
BAA-614]
gi|295898803|gb|EFG78319.1| 30S ribosomal protein S9 [Mycobacterium parascrofulaceum ATCC
BAA-614]
Length=164
Score = 253 bits (647), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 136/164 (83%), Positives = 139/164 (85%), Gaps = 13/164 (7%)
Query 1 MTETTPA-PQTPAAPAGP------------AQSFVLERPIQTVGRRKEAVVRVRLVPGTG 47
MTETT A T A P P A+SFV +RPIQTVGRRKEAVVRVRLVPGTG
Sbjct 1 MTETTEALDDTTATPETPDVPAEAPAAAPAAESFVFDRPIQTVGRRKEAVVRVRLVPGTG 60
Query 48 KFDLNGRSLEDYFPNKVHQQLIKAPLVTVDRVESFDIFAHLGGGGPSGQAGALRLGIARA 107
KFDLNGRSLEDYFPNKVHQQLIKAPLVTVDRVE+FDIFA L GGGPSGQAGALRLGIARA
Sbjct 61 KFDLNGRSLEDYFPNKVHQQLIKAPLVTVDRVENFDIFALLHGGGPSGQAGALRLGIARA 120
Query 108 LILVSPEDRPALKKAGFLTRDPRATERKKYGLKKARKAPQYSKR 151
LIL PEDRPALKKAGFLTRDPRATERKKYGLKKARKAPQYSKR
Sbjct 121 LILAQPEDRPALKKAGFLTRDPRATERKKYGLKKARKAPQYSKR 164
>gi|183981127|ref|YP_001849418.1| ribosomal protein S9, RpsI [Mycobacterium marinum M]
gi|226695247|sp|B2HCZ1.1|RS9_MYCMM RecName: Full=30S ribosomal protein S9
gi|183174453|gb|ACC39563.1| ribosomal protein S9, RpsI [Mycobacterium marinum M]
Length=152
Score = 250 bits (639), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 128/152 (85%), Positives = 136/152 (90%), Gaps = 1/152 (0%)
Query 1 MTETTPAPQTPAAPAGP-AQSFVLERPIQTVGRRKEAVVRVRLVPGTGKFDLNGRSLEDY 59
MTETTP + ++SFV ERPIQTVGRRKEAVVRVRLVPG+GKFDLNGRSLE Y
Sbjct 1 MTETTPEVEVAVEAEVTYSESFVFERPIQTVGRRKEAVVRVRLVPGSGKFDLNGRSLEAY 60
Query 60 FPNKVHQQLIKAPLVTVDRVESFDIFAHLGGGGPSGQAGALRLGIARALILVSPEDRPAL 119
FPNKVHQQLIKAPLVTVDR+ES+DIFA L GGGPSGQAGALRLGIARALI+ +PEDRPAL
Sbjct 61 FPNKVHQQLIKAPLVTVDRLESYDIFALLHGGGPSGQAGALRLGIARALIVANPEDRPAL 120
Query 120 KKAGFLTRDPRATERKKYGLKKARKAPQYSKR 151
KKAGFLTRDPRATERKKYGLKKARKAPQYSKR
Sbjct 121 KKAGFLTRDPRATERKKYGLKKARKAPQYSKR 152
>gi|15827098|ref|NP_301361.1| 30S ribosomal protein S9 [Mycobacterium leprae TN]
gi|221229576|ref|YP_002502992.1| 30S ribosomal protein S9 [Mycobacterium leprae Br4923]
gi|730673|sp|P40828.1|RS9_MYCLE RecName: Full=30S ribosomal protein S9
gi|254766317|sp|B8ZUC0.1|RS9_MYCLB RecName: Full=30S ribosomal protein S9
gi|467114|gb|AAA17296.1| rpsI [Mycobacterium leprae]
gi|13092646|emb|CAC29873.1| 30S ribosomal protein S9 [Mycobacterium leprae]
gi|219932683|emb|CAR70458.1| 30S ribosomal protein S9 [Mycobacterium leprae Br4923]
Length=153
Score = 249 bits (637), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 130/155 (84%), Positives = 137/155 (89%), Gaps = 6/155 (3%)
Query 1 MTETTPAPQ----TPAAPAGPAQSFVLERPIQTVGRRKEAVVRVRLVPGTGKFDLNGRSL 56
MTET+ A + TPAA ++SFV ER IQTVGRRKEAVVRVRLV GTGKFDLNGRSL
Sbjct 1 MTETSEAVEIAVGTPAAKH--SESFVFERSIQTVGRRKEAVVRVRLVLGTGKFDLNGRSL 58
Query 57 EDYFPNKVHQQLIKAPLVTVDRVESFDIFAHLGGGGPSGQAGALRLGIARALILVSPEDR 116
EDYFPNKVHQQLIKAPLVTV+R +FDIFA L GGGPSGQAGALRLGIARALIL SPEDR
Sbjct 59 EDYFPNKVHQQLIKAPLVTVERTRNFDIFALLHGGGPSGQAGALRLGIARALILASPEDR 118
Query 117 PALKKAGFLTRDPRATERKKYGLKKARKAPQYSKR 151
PALKKAGFLTRDPR+TERKKYGLKKARKAPQYSKR
Sbjct 119 PALKKAGFLTRDPRSTERKKYGLKKARKAPQYSKR 153
>gi|118616640|ref|YP_904972.1| 30S ribosomal protein S9 [Mycobacterium ulcerans Agy99]
gi|166229578|sp|A0PMD2.1|RS9_MYCUA RecName: Full=30S ribosomal protein S9
gi|118568750|gb|ABL03501.1| ribosomal protein S9, RpsI [Mycobacterium ulcerans Agy99]
Length=152
Score = 248 bits (634), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 127/152 (84%), Positives = 135/152 (89%), Gaps = 1/152 (0%)
Query 1 MTETTPAPQTPAAPAGP-AQSFVLERPIQTVGRRKEAVVRVRLVPGTGKFDLNGRSLEDY 59
MTETTP + ++SFV ERPIQTVGRRKEAVVRVRLVPG+GKFDLNGRSLE Y
Sbjct 1 MTETTPEVEVAVEAEVTYSESFVFERPIQTVGRRKEAVVRVRLVPGSGKFDLNGRSLEAY 60
Query 60 FPNKVHQQLIKAPLVTVDRVESFDIFAHLGGGGPSGQAGALRLGIARALILVSPEDRPAL 119
FPNKVHQQLIKAPLVTVDR+ES+DIFA L GGGPSGQAGALRLGIARALI+ +PEDRPAL
Sbjct 61 FPNKVHQQLIKAPLVTVDRLESYDIFALLHGGGPSGQAGALRLGIARALIVANPEDRPAL 120
Query 120 KKAGFLTRDPRATERKKYGLKKARKAPQYSKR 151
KKA FLTRDPRATERKKYGLKKARKAPQYSKR
Sbjct 121 KKACFLTRDPRATERKKYGLKKARKAPQYSKR 152
>gi|118468477|ref|YP_885937.1| 30S ribosomal protein S9 [Mycobacterium smegmatis str. MC2 155]
gi|166229574|sp|A0QSP9.1|RS9_MYCS2 RecName: Full=30S ribosomal protein S9
gi|118169764|gb|ABK70660.1| ribosomal protein S9 [Mycobacterium smegmatis str. MC2 155]
Length=150
Score = 241 bits (616), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 120/151 (80%), Positives = 133/151 (89%), Gaps = 1/151 (0%)
Query 1 MTETTPAPQTPAAPAGPAQSFVLERPIQTVGRRKEAVVRVRLVPGTGKFDLNGRSLEDYF 60
MT+ T + A P + +++RPIQTVGRRKEAVVRVRLVPGTG+F+L+GR+LE+YF
Sbjct 1 MTDVTET-EVVTESAEPREPVIIDRPIQTVGRRKEAVVRVRLVPGTGQFNLDGRTLENYF 59
Query 61 PNKVHQQLIKAPLVTVDRVESFDIFAHLGGGGPSGQAGALRLGIARALILVSPEDRPALK 120
PNKVHQQLIKAPLVTVDRV+ FDI+AHL GGGPSGQAGALRL IARALILV PEDRPALK
Sbjct 60 PNKVHQQLIKAPLVTVDRVDQFDIYAHLDGGGPSGQAGALRLAIARALILVQPEDRPALK 119
Query 121 KAGFLTRDPRATERKKYGLKKARKAPQYSKR 151
KAGFLTRDPRA ERKKYGLKKARKAPQYSKR
Sbjct 120 KAGFLTRDPRAIERKKYGLKKARKAPQYSKR 150
>gi|145225525|ref|YP_001136203.1| 30S ribosomal protein S9 [Mycobacterium gilvum PYR-GCK]
gi|315445878|ref|YP_004078757.1| 30S ribosomal protein S9P [Mycobacterium sp. Spyr1]
gi|145218011|gb|ABP47415.1| SSU ribosomal protein S9P [Mycobacterium gilvum PYR-GCK]
gi|315264181|gb|ADU00923.1| SSU ribosomal protein S9P [Mycobacterium sp. Spyr1]
Length=171
Score = 241 bits (614), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 122/150 (82%), Positives = 130/150 (87%), Gaps = 3/150 (2%)
Query 2 TETTPAPQTPAAPAGPAQSFVLERPIQTVGRRKEAVVRVRLVPGTGKFDLNGRSLEDYFP 61
TET A AAP P +++RPIQTVGRRKEAVVRVRLVPGTG+F L+GRSLE YFP
Sbjct 25 TETETAADEYAAPREPV---IIDRPIQTVGRRKEAVVRVRLVPGTGQFHLDGRSLESYFP 81
Query 62 NKVHQQLIKAPLVTVDRVESFDIFAHLGGGGPSGQAGALRLGIARALILVSPEDRPALKK 121
NKVHQQLIKAPLV VDR+E FDI+AHL GGGPSGQAGALRL IARALILV PEDRPALK+
Sbjct 82 NKVHQQLIKAPLVLVDRLEQFDIYAHLDGGGPSGQAGALRLAIARALILVQPEDRPALKR 141
Query 122 AGFLTRDPRATERKKYGLKKARKAPQYSKR 151
AGFLTRDPRA ERKKYGLKKARKAPQYSKR
Sbjct 142 AGFLTRDPRAIERKKYGLKKARKAPQYSKR 171
>gi|120402479|ref|YP_952308.1| 30S ribosomal protein S9 [Mycobacterium vanbaalenii PYR-1]
gi|119955297|gb|ABM12302.1| SSU ribosomal protein S9P [Mycobacterium vanbaalenii PYR-1]
Length=171
Score = 240 bits (613), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 117/135 (87%), Positives = 127/135 (95%), Gaps = 0/135 (0%)
Query 17 PAQSFVLERPIQTVGRRKEAVVRVRLVPGTGKFDLNGRSLEDYFPNKVHQQLIKAPLVTV 76
P + +++RPIQTVGRRKEAVVRVRLVPGTG+F+L+GR+LE+YFPNKVHQQLIKAPLVTV
Sbjct 37 PREPVIIDRPIQTVGRRKEAVVRVRLVPGTGQFNLDGRTLENYFPNKVHQQLIKAPLVTV 96
Query 77 DRVESFDIFAHLGGGGPSGQAGALRLGIARALILVSPEDRPALKKAGFLTRDPRATERKK 136
DRVE FDI+AHL GGGPSGQAGALRL IARALILV PEDRPALKKAGFLTRDPRA ERKK
Sbjct 97 DRVEQFDIYAHLDGGGPSGQAGALRLAIARALILVQPEDRPALKKAGFLTRDPRAIERKK 156
Query 137 YGLKKARKAPQYSKR 151
YGLKKARKAPQYSKR
Sbjct 157 YGLKKARKAPQYSKR 171
>gi|108798103|ref|YP_638300.1| 30S ribosomal protein S9 [Mycobacterium sp. MCS]
gi|119867199|ref|YP_937151.1| 30S ribosomal protein S9 [Mycobacterium sp. KMS]
gi|126433761|ref|YP_001069452.1| 30S ribosomal protein S9 [Mycobacterium sp. JLS]
6 more sequence titles
Length=158
Score = 239 bits (609), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 118/143 (83%), Positives = 128/143 (90%), Gaps = 0/143 (0%)
Query 9 QTPAAPAGPAQSFVLERPIQTVGRRKEAVVRVRLVPGTGKFDLNGRSLEDYFPNKVHQQL 68
+ AA P + ++RPIQTVGRRKEAVVRVRLVPGTGKF+L+GR+LE YFPNKVHQQL
Sbjct 16 EATAADVEPREPVYIDRPIQTVGRRKEAVVRVRLVPGTGKFNLDGRTLEAYFPNKVHQQL 75
Query 69 IKAPLVTVDRVESFDIFAHLGGGGPSGQAGALRLGIARALILVSPEDRPALKKAGFLTRD 128
IKAPLV VDR+ESFD++AHL GGGPSGQAGALRL IARALILV PEDRPALKKAGFLTRD
Sbjct 76 IKAPLVLVDRLESFDVYAHLDGGGPSGQAGALRLAIARALILVQPEDRPALKKAGFLTRD 135
Query 129 PRATERKKYGLKKARKAPQYSKR 151
PRA ERKKYGLKKARKAPQYSKR
Sbjct 136 PRAIERKKYGLKKARKAPQYSKR 158
>gi|342861883|ref|ZP_08718528.1| 30S ribosomal protein S9 [Mycobacterium colombiense CECT 3035]
gi|342130700|gb|EGT84004.1| 30S ribosomal protein S9 [Mycobacterium colombiense CECT 3035]
Length=179
Score = 239 bits (609), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 128/179 (72%), Positives = 135/179 (76%), Gaps = 28/179 (15%)
Query 1 MTETTPAPQTPAAPAGPAQS----------------------------FVLERPIQTVGR 32
MTETT A + P P P + FV +RPIQTVGR
Sbjct 1 MTETTEAVENPENPDTPEVAETVEETVAAAEETEAPVEAAAAPAPAEPFVFDRPIQTVGR 60
Query 33 RKEAVVRVRLVPGTGKFDLNGRSLEDYFPNKVHQQLIKAPLVTVDRVESFDIFAHLGGGG 92
RKEAVVRVRLVPGTGKF+LNGR+LE YFPNKVHQQLIKAPLVTVDRV+SFDI+A L GGG
Sbjct 61 RKEAVVRVRLVPGTGKFNLNGRTLEGYFPNKVHQQLIKAPLVTVDRVDSFDIYALLHGGG 120
Query 93 PSGQAGALRLGIARALILVSPEDRPALKKAGFLTRDPRATERKKYGLKKARKAPQYSKR 151
PSGQAGALRLGIARALIL PEDRP LKKAGFLTRDPRATERKKYGLKKARKAPQYSKR
Sbjct 121 PSGQAGALRLGIARALILAQPEDRPPLKKAGFLTRDPRATERKKYGLKKARKAPQYSKR 179
>gi|336441182|gb|AEI54816.1| 30S ribosomal protein S9 [Mycobacterium franklinii]
Length=173
Score = 238 bits (606), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 119/140 (85%), Positives = 128/140 (92%), Gaps = 3/140 (2%)
Query 12 AAPAGPAQSFVLERPIQTVGRRKEAVVRVRLVPGTGKFDLNGRSLEDYFPNKVHQQLIKA 71
AAP GP V+++PIQTVGRRKEAVVRVRLVPGTGKF L+GRSLE+YFPNKVHQQLIKA
Sbjct 37 AAPRGP---VVIDKPIQTVGRRKEAVVRVRLVPGTGKFHLDGRSLEEYFPNKVHQQLIKA 93
Query 72 PLVTVDRVESFDIFAHLGGGGPSGQAGALRLGIARALILVSPEDRPALKKAGFLTRDPRA 131
PLV+V+RV+S DIFAHL GGGPSGQAGALRL IARALI+V PEDRP LKKAGFLTRDPRA
Sbjct 94 PLVSVNRVDSVDIFAHLTGGGPSGQAGALRLAIARALIIVEPEDRPVLKKAGFLTRDPRA 153
Query 132 TERKKYGLKKARKAPQYSKR 151
ERKKYGLKKARKAPQYSKR
Sbjct 154 IERKKYGLKKARKAPQYSKR 173
>gi|336441186|gb|AEI54818.1| 30S ribosomal protein S9 [Mycobacterium chelonae]
Length=177
Score = 237 bits (605), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 117/140 (84%), Positives = 128/140 (92%), Gaps = 3/140 (2%)
Query 12 AAPAGPAQSFVLERPIQTVGRRKEAVVRVRLVPGTGKFDLNGRSLEDYFPNKVHQQLIKA 71
AAP GP V+++PIQTVGRRKEAVVRVRLVPGTGKF L+GR+LE+YFPNKVHQQLIKA
Sbjct 41 AAPRGP---VVIDKPIQTVGRRKEAVVRVRLVPGTGKFHLDGRTLEEYFPNKVHQQLIKA 97
Query 72 PLVTVDRVESFDIFAHLGGGGPSGQAGALRLGIARALILVSPEDRPALKKAGFLTRDPRA 131
PLV+V+RV+S DI+AHL GGGPSGQAGALRL IARALI+V PEDRP LKKAGFLTRDPRA
Sbjct 98 PLVSVNRVDSVDIYAHLSGGGPSGQAGALRLAIARALIIVEPEDRPVLKKAGFLTRDPRA 157
Query 132 TERKKYGLKKARKAPQYSKR 151
ERKKYGLKKARKAPQYSKR
Sbjct 158 IERKKYGLKKARKAPQYSKR 177
>gi|336441184|gb|AEI54817.1| 30S ribosomal protein S9 [Mycobacterium bolletii]
Length=174
Score = 237 bits (604), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 118/140 (85%), Positives = 128/140 (92%), Gaps = 3/140 (2%)
Query 12 AAPAGPAQSFVLERPIQTVGRRKEAVVRVRLVPGTGKFDLNGRSLEDYFPNKVHQQLIKA 71
AAP GP V+++PIQTVGRRKEAVVRVRLVPGTGKF L+GRSLE+YFPNKVHQQLIKA
Sbjct 38 AAPRGP---VVIDKPIQTVGRRKEAVVRVRLVPGTGKFHLDGRSLEEYFPNKVHQQLIKA 94
Query 72 PLVTVDRVESFDIFAHLGGGGPSGQAGALRLGIARALILVSPEDRPALKKAGFLTRDPRA 131
PLV+V+RV+S DI+AHL GGGPSGQAGALRL IARALI+V PEDRP LKKAGFLTRDPRA
Sbjct 95 PLVSVNRVDSVDIYAHLTGGGPSGQAGALRLAIARALIIVEPEDRPVLKKAGFLTRDPRA 154
Query 132 TERKKYGLKKARKAPQYSKR 151
ERKKYGLKKARKAPQYSKR
Sbjct 155 IERKKYGLKKARKAPQYSKR 174
>gi|336441190|gb|AEI54820.1| 30S ribosomal protein S9 [Mycobacterium massiliense]
Length=175
Score = 237 bits (604), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 118/140 (85%), Positives = 128/140 (92%), Gaps = 3/140 (2%)
Query 12 AAPAGPAQSFVLERPIQTVGRRKEAVVRVRLVPGTGKFDLNGRSLEDYFPNKVHQQLIKA 71
AAP GP V+++PIQTVGRRKEAVVRVRLVPGTGKF L+GRSLE+YFPNKVHQQLIKA
Sbjct 39 AAPRGP---VVIDKPIQTVGRRKEAVVRVRLVPGTGKFHLDGRSLEEYFPNKVHQQLIKA 95
Query 72 PLVTVDRVESFDIFAHLGGGGPSGQAGALRLGIARALILVSPEDRPALKKAGFLTRDPRA 131
PLV+V+RV+S DI+AHL GGGPSGQAGALRL IARALI+V PEDRP LKKAGFLTRDPRA
Sbjct 96 PLVSVNRVDSVDIYAHLTGGGPSGQAGALRLAIARALIIVEPEDRPVLKKAGFLTRDPRA 155
Query 132 TERKKYGLKKARKAPQYSKR 151
ERKKYGLKKARKAPQYSKR
Sbjct 156 IERKKYGLKKARKAPQYSKR 175
>gi|169630830|ref|YP_001704479.1| 30s ribosomal protein S9 [Mycobacterium abscessus ATCC 19977]
gi|169242797|emb|CAM63825.1| 30s ribosomal protein S9 [Mycobacterium abscessus]
gi|336441180|gb|AEI54815.1| 30S ribosomal protein S9 [Mycobacterium abscessus]
Length=175
Score = 237 bits (604), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 118/140 (85%), Positives = 128/140 (92%), Gaps = 3/140 (2%)
Query 12 AAPAGPAQSFVLERPIQTVGRRKEAVVRVRLVPGTGKFDLNGRSLEDYFPNKVHQQLIKA 71
AAP GP V+++PIQTVGRRKEAVVRVRLVPGTGKF L+GRSLE+YFPNKVHQQLIKA
Sbjct 39 AAPRGP---VVIDKPIQTVGRRKEAVVRVRLVPGTGKFHLDGRSLEEYFPNKVHQQLIKA 95
Query 72 PLVTVDRVESFDIFAHLGGGGPSGQAGALRLGIARALILVSPEDRPALKKAGFLTRDPRA 131
PLV+V+RV+S DI+AHL GGGPSGQAGALRL IARALI+V PEDRP LKKAGFLTRDPRA
Sbjct 96 PLVSVNRVDSVDIYAHLTGGGPSGQAGALRLAIARALIIVEPEDRPVLKKAGFLTRDPRA 155
Query 132 TERKKYGLKKARKAPQYSKR 151
ERKKYGLKKARKAPQYSKR
Sbjct 156 IERKKYGLKKARKAPQYSKR 175
>gi|336441188|gb|AEI54819.1| 30S ribosomal protein S9 [Mycobacterium immunogenum]
Length=173
Score = 234 bits (596), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 116/140 (83%), Positives = 127/140 (91%), Gaps = 3/140 (2%)
Query 12 AAPAGPAQSFVLERPIQTVGRRKEAVVRVRLVPGTGKFDLNGRSLEDYFPNKVHQQLIKA 71
AAP GP ++++PIQTVGRRKEAVVRVRLVPGTGKF L+GRSLE+YFPNKVHQQLIKA
Sbjct 37 AAPRGP---VIIDKPIQTVGRRKEAVVRVRLVPGTGKFHLDGRSLEEYFPNKVHQQLIKA 93
Query 72 PLVTVDRVESFDIFAHLGGGGPSGQAGALRLGIARALILVSPEDRPALKKAGFLTRDPRA 131
PLV+V+R +S DI+AHL GGGPSGQAGALRL IARALI+V PEDRP LKKAGFLTRDPRA
Sbjct 94 PLVSVNRADSVDIYAHLTGGGPSGQAGALRLAIARALIIVEPEDRPVLKKAGFLTRDPRA 153
Query 132 TERKKYGLKKARKAPQYSKR 151
ERKKYGLKKARKAPQYSKR
Sbjct 154 IERKKYGLKKARKAPQYSKR 173
>gi|326381864|ref|ZP_08203557.1| 30S ribosomal protein S9 [Gordonia neofelifaecis NRRL B-59395]
gi|326199290|gb|EGD56471.1| 30S ribosomal protein S9 [Gordonia neofelifaecis NRRL B-59395]
Length=173
Score = 234 bits (596), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 119/150 (80%), Positives = 127/150 (85%), Gaps = 3/150 (2%)
Query 2 TETTPAPQTPAAPAGPAQSFVLERPIQTVGRRKEAVVRVRLVPGTGKFDLNGRSLEDYFP 61
TE+ +T A GP VL+RPIQTVGRRKEAVVRVRLVPGTG+F LNGR+LEDYFP
Sbjct 27 TESVEVVETEAVTRGP---VVLDRPIQTVGRRKEAVVRVRLVPGTGEFTLNGRTLEDYFP 83
Query 62 NKVHQQLIKAPLVTVDRVESFDIFAHLGGGGPSGQAGALRLGIARALILVSPEDRPALKK 121
NKVHQQLIKAPLVTV+R ++FDI A L GGGPSGQAGALRL IAR LI VSPEDRPALKK
Sbjct 84 NKVHQQLIKAPLVTVERTDAFDIHARLVGGGPSGQAGALRLAIARGLIEVSPEDRPALKK 143
Query 122 AGFLTRDPRATERKKYGLKKARKAPQYSKR 151
AGFLTRD RA ERKKYGLKKARKA QYSKR
Sbjct 144 AGFLTRDARAVERKKYGLKKARKASQYSKR 173
>gi|262201641|ref|YP_003272849.1| 30S ribosomal protein S9 [Gordonia bronchialis DSM 43247]
gi|262084988|gb|ACY20956.1| ribosomal protein S9 [Gordonia bronchialis DSM 43247]
Length=161
Score = 231 bits (590), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 121/150 (81%), Positives = 129/150 (86%), Gaps = 4/150 (2%)
Query 3 ETTPAPQTPAAPAGPAQSFVLERPIQTVGRRKEAVVRVRLVPGTGKFDLNG-RSLEDYFP 61
+TT PA GP V++RPIQTVGRRKEAVVRVRLVPG+G+F LNG RSLE+YFP
Sbjct 15 DTTAVAAEPAVDRGP---VVIDRPIQTVGRRKEAVVRVRLVPGSGQFTLNGARSLEEYFP 71
Query 62 NKVHQQLIKAPLVTVDRVESFDIFAHLGGGGPSGQAGALRLGIARALILVSPEDRPALKK 121
NKVHQQLIKAPLVTV+RVESFDI A L GGGPSGQAGALRL IARALI V+PEDRPALKK
Sbjct 72 NKVHQQLIKAPLVTVERVESFDIHAKLVGGGPSGQAGALRLAIARALIEVTPEDRPALKK 131
Query 122 AGFLTRDPRATERKKYGLKKARKAPQYSKR 151
AGFLTRDPRA ERKKYGLKKARKA QYSKR
Sbjct 132 AGFLTRDPRAVERKKYGLKKARKASQYSKR 161
>gi|54022834|ref|YP_117076.1| 30S ribosomal protein S9 [Nocardia farcinica IFM 10152]
gi|81680277|sp|Q5Z1H9.1|RS9_NOCFA RecName: Full=30S ribosomal protein S9
gi|54014342|dbj|BAD55712.1| putative ribosomal protein S9 [Nocardia farcinica IFM 10152]
Length=167
Score = 231 bits (590), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 113/130 (87%), Positives = 123/130 (95%), Gaps = 0/130 (0%)
Query 22 VLERPIQTVGRRKEAVVRVRLVPGTGKFDLNGRSLEDYFPNKVHQQLIKAPLVTVDRVES 81
V++RP+QTVGRRKEAVVRVRLVPGTG+F LNGRS+EDYFPNKVHQQL+K+PLVTV+R ES
Sbjct 38 VIDRPVQTVGRRKEAVVRVRLVPGTGQFVLNGRSIEDYFPNKVHQQLVKSPLVTVERTES 97
Query 82 FDIFAHLGGGGPSGQAGALRLGIARALILVSPEDRPALKKAGFLTRDPRATERKKYGLKK 141
FDI A L GGGPSGQAGALRL IARALI V+PEDRPALK+AGFLTRDPRATERKKYGLKK
Sbjct 98 FDIHARLVGGGPSGQAGALRLAIARALIEVTPEDRPALKRAGFLTRDPRATERKKYGLKK 157
Query 142 ARKAPQYSKR 151
ARKAPQYSKR
Sbjct 158 ARKAPQYSKR 167
>gi|296138600|ref|YP_003645843.1| 30S ribosomal protein S9 [Tsukamurella paurometabola DSM 20162]
gi|296026734|gb|ADG77504.1| ribosomal protein S9 [Tsukamurella paurometabola DSM 20162]
Length=167
Score = 228 bits (582), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 114/148 (78%), Positives = 125/148 (85%), Gaps = 0/148 (0%)
Query 4 TTPAPQTPAAPAGPAQSFVLERPIQTVGRRKEAVVRVRLVPGTGKFDLNGRSLEDYFPNK 63
T+ P+ A P V+ERPIQTVGRRKEAVVRVRL GTG F LNGR++EDYFPNK
Sbjct 20 TSETPEATAETRAPRGPVVVERPIQTVGRRKEAVVRVRLTAGTGNFVLNGRTIEDYFPNK 79
Query 64 VHQQLIKAPLVTVDRVESFDIFAHLGGGGPSGQAGALRLGIARALILVSPEDRPALKKAG 123
+HQQL+K PLVTV+R+ESFDI A+L GGGPSGQAGALRL IARALI VSPEDRPALK+AG
Sbjct 80 LHQQLVKDPLVTVERLESFDIAANLTGGGPSGQAGALRLAIARALIEVSPEDRPALKRAG 139
Query 124 FLTRDPRATERKKYGLKKARKAPQYSKR 151
FLTRDPRA ERKKYGLKKARKA QYSKR
Sbjct 140 FLTRDPRAVERKKYGLKKARKASQYSKR 167
>gi|343925126|ref|ZP_08764658.1| 30S ribosomal protein S9 [Gordonia alkanivorans NBRC 16433]
gi|343765057|dbj|GAA11584.1| 30S ribosomal protein S9 [Gordonia alkanivorans NBRC 16433]
Length=179
Score = 228 bits (582), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 113/131 (87%), Positives = 121/131 (93%), Gaps = 0/131 (0%)
Query 21 FVLERPIQTVGRRKEAVVRVRLVPGTGKFDLNGRSLEDYFPNKVHQQLIKAPLVTVDRVE 80
V++RPIQTVGRRKEAVVRVRL+PGTG+F LNGRSLE+YFPNKVHQQLIKAPLV V+R E
Sbjct 49 IVIDRPIQTVGRRKEAVVRVRLMPGTGEFKLNGRSLEEYFPNKVHQQLIKAPLVLVERTE 108
Query 81 SFDIFAHLGGGGPSGQAGALRLGIARALILVSPEDRPALKKAGFLTRDPRATERKKYGLK 140
SFDIFA L GGGPSGQAGALRL IARALI V+P+DRPALKKAGFLTRDPRA ERKKYGLK
Sbjct 109 SFDIFAKLVGGGPSGQAGALRLAIARALIEVTPDDRPALKKAGFLTRDPRAVERKKYGLK 168
Query 141 KARKAPQYSKR 151
KARKA QYSKR
Sbjct 169 KARKASQYSKR 179
>gi|111023134|ref|YP_706106.1| 30S ribosomal protein S9 [Rhodococcus jostii RHA1]
gi|110822664|gb|ABG97948.1| 30S ribosomal protein S9 [Rhodococcus jostii RHA1]
Length=178
Score = 228 bits (580), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 113/139 (82%), Positives = 120/139 (87%), Gaps = 0/139 (0%)
Query 13 APAGPAQSFVLERPIQTVGRRKEAVVRVRLVPGTGKFDLNGRSLEDYFPNKVHQQLIKAP 72
A A P V++RPIQTVGRRKEAVVRVRL PG+G F LNGR++EDYFPNKVHQQLIKAP
Sbjct 40 AAAAPQAPIVIDRPIQTVGRRKEAVVRVRLTPGSGDFKLNGRTIEDYFPNKVHQQLIKAP 99
Query 73 LVTVDRVESFDIFAHLGGGGPSGQAGALRLGIARALILVSPEDRPALKKAGFLTRDPRAT 132
LVTV+R ESFDI A L GGGPSGQAGALRL IARALI V+PEDRPALK AGFLTRD RA
Sbjct 100 LVTVERAESFDIVALLHGGGPSGQAGALRLAIARALIEVTPEDRPALKSAGFLTRDARAV 159
Query 133 ERKKYGLKKARKAPQYSKR 151
ERKKYGLKKARKA QYSKR
Sbjct 160 ERKKYGLKKARKASQYSKR 178
>gi|226365640|ref|YP_002783423.1| 30S ribosomal protein S9 [Rhodococcus opacus B4]
gi|254766319|sp|C1B057.1|RS9_RHOOB RecName: Full=30S ribosomal protein S9
gi|226244130|dbj|BAH54478.1| 30S ribosomal protein S9 [Rhodococcus opacus B4]
Length=170
Score = 227 bits (578), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 113/139 (82%), Positives = 120/139 (87%), Gaps = 0/139 (0%)
Query 13 APAGPAQSFVLERPIQTVGRRKEAVVRVRLVPGTGKFDLNGRSLEDYFPNKVHQQLIKAP 72
A A P V++RPIQTVGRRKEAVVRVRL PG+G F LNGR++EDYFPNKVHQQLIKAP
Sbjct 32 AAAAPQAPIVIDRPIQTVGRRKEAVVRVRLTPGSGDFKLNGRTIEDYFPNKVHQQLIKAP 91
Query 73 LVTVDRVESFDIFAHLGGGGPSGQAGALRLGIARALILVSPEDRPALKKAGFLTRDPRAT 132
LVTV+R ESFDI A L GGGPSGQAGALRL IARALI V+PEDRPALK AGFLTRD RA
Sbjct 92 LVTVERAESFDIVALLHGGGPSGQAGALRLAIARALIEVTPEDRPALKSAGFLTRDARAV 151
Query 133 ERKKYGLKKARKAPQYSKR 151
ERKKYGLKKARKA QYSKR
Sbjct 152 ERKKYGLKKARKASQYSKR 170
>gi|312140873|ref|YP_004008209.1| 30S ribosomal protein s9 rpsi [Rhodococcus equi 103S]
gi|325675489|ref|ZP_08155173.1| 30S ribosomal protein S9 [Rhodococcus equi ATCC 33707]
gi|311890212|emb|CBH49530.1| 30S ribosomal protein S9 RpsI [Rhodococcus equi 103S]
gi|325553460|gb|EGD23138.1| 30S ribosomal protein S9 [Rhodococcus equi ATCC 33707]
Length=168
Score = 225 bits (573), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 114/150 (76%), Positives = 125/150 (84%), Gaps = 3/150 (2%)
Query 2 TETTPAPQTPAAPAGPAQSFVLERPIQTVGRRKEAVVRVRLVPGTGKFDLNGRSLEDYFP 61
+E+ A AAP P V++RP+QTVGRRKEAVVRVRL PGTG+F LNGR+LEDYFP
Sbjct 22 SESEAAEVYEAAPQAP---IVIDRPVQTVGRRKEAVVRVRLTPGTGEFKLNGRTLEDYFP 78
Query 62 NKVHQQLIKAPLVTVDRVESFDIFAHLGGGGPSGQAGALRLGIARALILVSPEDRPALKK 121
NKVHQQLIKAPLV V+R ESFDI A L GGGPSGQAGALRL I+RALI V+ EDRPALK+
Sbjct 79 NKVHQQLIKAPLVLVERAESFDITALLTGGGPSGQAGALRLAISRALIEVTAEDRPALKR 138
Query 122 AGFLTRDPRATERKKYGLKKARKAPQYSKR 151
AGFLTRD RA ERKKYGLKKARKA QYSKR
Sbjct 139 AGFLTRDARAVERKKYGLKKARKASQYSKR 168
>gi|226305394|ref|YP_002765352.1| 30S ribosomal protein S9 [Rhodococcus erythropolis PR4]
gi|259495452|sp|C0ZW78.1|RS9_RHOE4 RecName: Full=30S ribosomal protein S9
gi|226184509|dbj|BAH32613.1| 30S ribosomal protein S9 [Rhodococcus erythropolis PR4]
Length=170
Score = 221 bits (563), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 109/131 (84%), Positives = 118/131 (91%), Gaps = 0/131 (0%)
Query 21 FVLERPIQTVGRRKEAVVRVRLVPGTGKFDLNGRSLEDYFPNKVHQQLIKAPLVTVDRVE 80
VL+RP+QTVGRRKEAVVRVR+ PGTG+F LNGR+LEDYFPNKVHQQLIKAPLV V+R E
Sbjct 40 IVLDRPVQTVGRRKEAVVRVRMTPGTGQFKLNGRTLEDYFPNKVHQQLIKAPLVLVERPE 99
Query 81 SFDIFAHLGGGGPSGQAGALRLGIARALILVSPEDRPALKKAGFLTRDPRATERKKYGLK 140
SFDI A L GGGPSGQAGALRL IARALI V+P+DRPALK+AGFLTRD RA ERKKYGLK
Sbjct 100 SFDIIALLHGGGPSGQAGALRLAIARALIEVTPDDRPALKRAGFLTRDARAVERKKYGLK 159
Query 141 KARKAPQYSKR 151
KARKA QYSKR
Sbjct 160 KARKASQYSKR 170
>gi|333921703|ref|YP_004495284.1| 30S ribosomal protein S9 [Amycolicicoccus subflavus DQS3-9A1]
gi|333483924|gb|AEF42484.1| 30S ribosomal protein S9 [Amycolicicoccus subflavus DQS3-9A1]
Length=197
Score = 221 bits (562), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 111/129 (87%), Positives = 118/129 (92%), Gaps = 0/129 (0%)
Query 23 LERPIQTVGRRKEAVVRVRLVPGTGKFDLNGRSLEDYFPNKVHQQLIKAPLVTVDRVESF 82
L+RPIQTVGRRKEAVVRVRL+PG+G F LNGRSLE YFPNKVHQQ+IKAPLVTVDR +F
Sbjct 69 LDRPIQTVGRRKEAVVRVRLLPGSGDFKLNGRSLEAYFPNKVHQQIIKAPLVTVDREVAF 128
Query 83 DIFAHLGGGGPSGQAGALRLGIARALILVSPEDRPALKKAGFLTRDPRATERKKYGLKKA 142
DI A L GGGPSGQAGALRL IARALI V+P+DRPALKKAGFLTRD RATERKKYGLKKA
Sbjct 129 DIHARLHGGGPSGQAGALRLAIARALIEVTPDDRPALKKAGFLTRDARATERKKYGLKKA 188
Query 143 RKAPQYSKR 151
RKAPQYSKR
Sbjct 189 RKAPQYSKR 197
>gi|229489395|ref|ZP_04383258.1| ribosomal protein S9 [Rhodococcus erythropolis SK121]
gi|229323492|gb|EEN89250.1| ribosomal protein S9 [Rhodococcus erythropolis SK121]
Length=161
Score = 220 bits (561), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 109/131 (84%), Positives = 118/131 (91%), Gaps = 0/131 (0%)
Query 21 FVLERPIQTVGRRKEAVVRVRLVPGTGKFDLNGRSLEDYFPNKVHQQLIKAPLVTVDRVE 80
VL+RP+QTVGRRKEAVVRVR+ PGTG+F LNGR+LEDYFPNKVHQQLIKAPLV V+R E
Sbjct 31 IVLDRPVQTVGRRKEAVVRVRMAPGTGQFKLNGRTLEDYFPNKVHQQLIKAPLVLVERPE 90
Query 81 SFDIFAHLGGGGPSGQAGALRLGIARALILVSPEDRPALKKAGFLTRDPRATERKKYGLK 140
SFDI A L GGGPSGQAGALRL IARALI V+P+DRPALK+AGFLTRD RA ERKKYGLK
Sbjct 91 SFDIIALLHGGGPSGQAGALRLAIARALIEVTPDDRPALKRAGFLTRDARAVERKKYGLK 150
Query 141 KARKAPQYSKR 151
KARKA QYSKR
Sbjct 151 KARKASQYSKR 161
>gi|291003847|ref|ZP_06561820.1| 30S ribosomal protein S9 [Saccharopolyspora erythraea NRRL 2338]
Length=162
Score = 211 bits (538), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 109/152 (72%), Positives = 119/152 (79%), Gaps = 4/152 (2%)
Query 4 TTPAPQTPAAPAGPAQSFVLE----RPIQTVGRRKEAVVRVRLVPGTGKFDLNGRSLEDY 59
T PA + PA P + RP+QTVGRRKEAVVRVRLVPG G F LNG+SLE Y
Sbjct 11 TAPADEAPAVEDAPVAEDIAPVPAGRPVQTVGRRKEAVVRVRLVPGNGGFKLNGKSLEQY 70
Query 60 FPNKVHQQLIKAPLVTVDRVESFDIFAHLGGGGPSGQAGALRLGIARALILVSPEDRPAL 119
FPNKVHQQLIK PLVTV+RVESFD+ A L GGGPSGQAGALR+ IARAL+ + +DRPAL
Sbjct 71 FPNKVHQQLIKEPLVTVERVESFDVAATLRGGGPSGQAGALRMAIARALVELDADDRPAL 130
Query 120 KKAGFLTRDPRATERKKYGLKKARKAPQYSKR 151
KKAG LTRD R ERKKYGLKKARKAPQYSKR
Sbjct 131 KKAGMLTRDSREKERKKYGLKKARKAPQYSKR 162
>gi|333991908|ref|YP_004524522.1| 30S ribosomal protein S9 RpsI [Mycobacterium sp. JDM601]
gi|333487876|gb|AEF37268.1| ribosomal protein S9 RpsI [Mycobacterium sp. JDM601]
Length=168
Score = 211 bits (537), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 122/154 (80%), Positives = 134/154 (88%), Gaps = 3/154 (1%)
Query 1 MTETTPAPQTPAAPAGPAQSFV---LERPIQTVGRRKEAVVRVRLVPGTGKFDLNGRSLE 57
+TE A +T A A A ++ L RPIQTVGRRKEAVVRVRLVPGTGKF+L+GR+LE
Sbjct 15 VTEAVEADETVAVQADAAPAYEPHDLGRPIQTVGRRKEAVVRVRLVPGTGKFNLDGRTLE 74
Query 58 DYFPNKVHQQLIKAPLVTVDRVESFDIFAHLGGGGPSGQAGALRLGIARALILVSPEDRP 117
YFPNKVHQQLIKAPLVTVDR++SFD++AHL GGGPSGQAGALRL +ARALILV PEDRP
Sbjct 75 AYFPNKVHQQLIKAPLVTVDRLDSFDVYAHLDGGGPSGQAGALRLALARALILVQPEDRP 134
Query 118 ALKKAGFLTRDPRATERKKYGLKKARKAPQYSKR 151
LKKAGFLTRDPRATERKKYGLKKARKAPQYSKR
Sbjct 135 VLKKAGFLTRDPRATERKKYGLKKARKAPQYSKR 168
>gi|300782658|ref|YP_003762949.1| 30S ribosomal protein S9 [Amycolatopsis mediterranei U32]
gi|299792172|gb|ADJ42547.1| small subunit ribosomal protein S9 [Amycolatopsis mediterranei
U32]
gi|340524029|gb|AEK39234.1| 30S ribosomal protein S9 [Amycolatopsis mediterranei S699]
Length=187
Score = 211 bits (537), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 104/124 (84%), Positives = 113/124 (92%), Gaps = 0/124 (0%)
Query 28 QTVGRRKEAVVRVRLVPGTGKFDLNGRSLEDYFPNKVHQQLIKAPLVTVDRVESFDIFAH 87
QTVGRRKEAVVRVR+VPGTG+F LNGR+LE+YFPNKVHQQLIK PLV V++ +SFDIFA+
Sbjct 64 QTVGRRKEAVVRVRVVPGTGQFKLNGRTLEEYFPNKVHQQLIKDPLVLVEKPDSFDIFAN 123
Query 88 LGGGGPSGQAGALRLGIARALILVSPEDRPALKKAGFLTRDPRATERKKYGLKKARKAPQ 147
L GGG SGQAGALRL IARALI V +DRPALKKAGFLTRD RATERKKYGLKKARKAPQ
Sbjct 124 LHGGGVSGQAGALRLAIARALIEVDADDRPALKKAGFLTRDARATERKKYGLKKARKAPQ 183
Query 148 YSKR 151
YSKR
Sbjct 184 YSKR 187
>gi|134103209|ref|YP_001108870.1| 30S ribosomal protein S9 [Saccharopolyspora erythraea NRRL 2338]
gi|166229599|sp|A4FPH0.1|RS9_SACEN RecName: Full=30S ribosomal protein S9
gi|133915832|emb|CAM05945.1| 30S ribosomal protein S9 [Saccharopolyspora erythraea NRRL 2338]
Length=153
Score = 211 bits (536), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 109/152 (72%), Positives = 119/152 (79%), Gaps = 4/152 (2%)
Query 4 TTPAPQTPAAPAGPAQSFVLE----RPIQTVGRRKEAVVRVRLVPGTGKFDLNGRSLEDY 59
T PA + PA P + RP+QTVGRRKEAVVRVRLVPG G F LNG+SLE Y
Sbjct 2 TAPADEAPAVEDAPVAEDIAPVPAGRPVQTVGRRKEAVVRVRLVPGNGGFKLNGKSLEQY 61
Query 60 FPNKVHQQLIKAPLVTVDRVESFDIFAHLGGGGPSGQAGALRLGIARALILVSPEDRPAL 119
FPNKVHQQLIK PLVTV+RVESFD+ A L GGGPSGQAGALR+ IARAL+ + +DRPAL
Sbjct 62 FPNKVHQQLIKEPLVTVERVESFDVAATLRGGGPSGQAGALRMAIARALVELDADDRPAL 121
Query 120 KKAGFLTRDPRATERKKYGLKKARKAPQYSKR 151
KKAG LTRD R ERKKYGLKKARKAPQYSKR
Sbjct 122 KKAGMLTRDSREKERKKYGLKKARKAPQYSKR 153
>gi|302524042|ref|ZP_07276384.1| ribosomal protein S9 [Streptomyces sp. AA4]
gi|302432937|gb|EFL04753.1| ribosomal protein S9 [Streptomyces sp. AA4]
Length=162
Score = 210 bits (534), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 103/124 (84%), Positives = 113/124 (92%), Gaps = 0/124 (0%)
Query 28 QTVGRRKEAVVRVRLVPGTGKFDLNGRSLEDYFPNKVHQQLIKAPLVTVDRVESFDIFAH 87
QTVGRRKEAVVRVR+VPGTG+F LNG+SLE YFPNKVHQQLI+ PLVTV++ +SFDIFA+
Sbjct 39 QTVGRRKEAVVRVRVVPGTGEFKLNGKSLEQYFPNKVHQQLIREPLVTVEKPDSFDIFAN 98
Query 88 LGGGGPSGQAGALRLGIARALILVSPEDRPALKKAGFLTRDPRATERKKYGLKKARKAPQ 147
L GGG SGQAGALRL IARAL+ V +DRPALKKAGFLTRD RATERKKYGLKKARKAPQ
Sbjct 99 LKGGGISGQAGALRLAIARALVEVDADDRPALKKAGFLTRDARATERKKYGLKKARKAPQ 158
Query 148 YSKR 151
YSKR
Sbjct 159 YSKR 162
>gi|284992834|ref|YP_003411388.1| 30S ribosomal protein S9 [Geodermatophilus obscurus DSM 43160]
gi|284066079|gb|ADB77017.1| ribosomal protein S9 [Geodermatophilus obscurus DSM 43160]
Length=139
Score = 209 bits (532), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 101/127 (80%), Positives = 112/127 (89%), Gaps = 0/127 (0%)
Query 25 RPIQTVGRRKEAVVRVRLVPGTGKFDLNGRSLEDYFPNKVHQQLIKAPLVTVDRVESFDI 84
RP+QTVGRRKEA+VRVRL+PGTG+F LNGR++E+YFPNKVHQQLI+ P VTV+R E +D+
Sbjct 13 RPVQTVGRRKEAIVRVRLLPGTGQFRLNGRTIEEYFPNKVHQQLIREPFVTVERTEQYDV 72
Query 85 FAHLGGGGPSGQAGALRLGIARALILVSPEDRPALKKAGFLTRDPRATERKKYGLKKARK 144
L GGG SGQAGALRL IARALI V EDRPALKKAGFLTRDPR TERKKYGLKKARK
Sbjct 73 VGILRGGGVSGQAGALRLAIARALIAVEAEDRPALKKAGFLTRDPRVTERKKYGLKKARK 132
Query 145 APQYSKR 151
APQYSKR
Sbjct 133 APQYSKR 139
>gi|257054516|ref|YP_003132348.1| 30S ribosomal protein S9P [Saccharomonospora viridis DSM 43017]
gi|256584388|gb|ACU95521.1| SSU ribosomal protein S9P [Saccharomonospora viridis DSM 43017]
Length=162
Score = 208 bits (529), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 101/124 (82%), Positives = 110/124 (89%), Gaps = 0/124 (0%)
Query 28 QTVGRRKEAVVRVRLVPGTGKFDLNGRSLEDYFPNKVHQQLIKAPLVTVDRVESFDIFAH 87
QTVGRRKEAVVRVR+VPGTG+F LNG+SLE YFPNKVHQQLI+ PLVTV++ ESFD+ A
Sbjct 39 QTVGRRKEAVVRVRMVPGTGEFRLNGKSLEQYFPNKVHQQLIREPLVTVEKAESFDVHAR 98
Query 88 LGGGGPSGQAGALRLGIARALILVSPEDRPALKKAGFLTRDPRATERKKYGLKKARKAPQ 147
L GGG SGQAGALRL IARAL + +DRPALKKAGFLTRD RATERKKYGLKKARKAPQ
Sbjct 99 LHGGGISGQAGALRLAIARALAEIDSDDRPALKKAGFLTRDARATERKKYGLKKARKAPQ 158
Query 148 YSKR 151
YSKR
Sbjct 159 YSKR 162
>gi|331699124|ref|YP_004335363.1| 30S ribosomal protein S9 [Pseudonocardia dioxanivorans CB1190]
gi|326953813|gb|AEA27510.1| ribosomal protein S9 [Pseudonocardia dioxanivorans CB1190]
Length=201
Score = 207 bits (526), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 101/132 (77%), Positives = 114/132 (87%), Gaps = 0/132 (0%)
Query 20 SFVLERPIQTVGRRKEAVVRVRLVPGTGKFDLNGRSLEDYFPNKVHQQLIKAPLVTVDRV 79
+ +++RPIQTVGRRKEAVVRVRLV G+GKF LNG+ LE YFPNK+HQQLI+ PLVTV++
Sbjct 70 AVLIDRPIQTVGRRKEAVVRVRLVAGSGKFTLNGKPLETYFPNKLHQQLIREPLVTVEKT 129
Query 80 ESFDIFAHLGGGGPSGQAGALRLGIARALILVSPEDRPALKKAGFLTRDPRATERKKYGL 139
E FDIFA+L GGG SGQAGALRL IARAL+ EDRP LK+AGFLTRD R TERKKYGL
Sbjct 130 ERFDIFANLHGGGISGQAGALRLAIARALVEADSEDRPPLKRAGFLTRDARVTERKKYGL 189
Query 140 KKARKAPQYSKR 151
KKARKAPQYSKR
Sbjct 190 KKARKAPQYSKR 201
>gi|258651417|ref|YP_003200573.1| 30S ribosomal protein S9 [Nakamurella multipartita DSM 44233]
gi|258554642|gb|ACV77584.1| ribosomal protein S9 [Nakamurella multipartita DSM 44233]
Length=174
Score = 206 bits (525), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 100/129 (78%), Positives = 113/129 (88%), Gaps = 0/129 (0%)
Query 23 LERPIQTVGRRKEAVVRVRLVPGTGKFDLNGRSLEDYFPNKVHQQLIKAPLVTVDRVESF 82
++RP+QTVGRRKEA+VR+RL+PGTG+F LNGR L+ YFPNKVHQQLIK PLVTV++ E +
Sbjct 46 MDRPVQTVGRRKEAIVRIRLLPGTGEFTLNGRPLDSYFPNKVHQQLIKEPLVTVEKAEIY 105
Query 83 DIFAHLGGGGPSGQAGALRLGIARALILVSPEDRPALKKAGFLTRDPRATERKKYGLKKA 142
D+ A L GGG +GQAGALRL IARALI V DRPALKKAGFLTRD RATERKKYGLKKA
Sbjct 106 DVIARLHGGGVTGQAGALRLAIARALIEVDETDRPALKKAGFLTRDARATERKKYGLKKA 165
Query 143 RKAPQYSKR 151
RKAPQYSKR
Sbjct 166 RKAPQYSKR 174
>gi|319948368|ref|ZP_08022510.1| 30S ribosomal protein S9 [Dietzia cinnamea P4]
gi|319437966|gb|EFV92944.1| 30S ribosomal protein S9 [Dietzia cinnamea P4]
Length=180
Score = 205 bits (521), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 102/126 (81%), Positives = 109/126 (87%), Gaps = 0/126 (0%)
Query 26 PIQTVGRRKEAVVRVRLVPGTGKFDLNGRSLEDYFPNKVHQQLIKAPLVTVDRVESFDIF 85
P Q VGRRKEAV RVRL+PG+G+F LNGRSLEDYFPNKVHQQL+K+PLV V+R E FDI
Sbjct 55 PAQAVGRRKEAVARVRLLPGSGQFTLNGRSLEDYFPNKVHQQLVKSPLVLVEREEQFDIV 114
Query 86 AHLGGGGPSGQAGALRLGIARALILVSPEDRPALKKAGFLTRDPRATERKKYGLKKARKA 145
A L GGGPSGQAGALRL IARAL SP+DRPALKKAGFLTRD RA ERKK GLKKARKA
Sbjct 115 ALLHGGGPSGQAGALRLAIARALTQYSPDDRPALKKAGFLTRDARAVERKKAGLKKARKA 174
Query 146 PQYSKR 151
PQYSKR
Sbjct 175 PQYSKR 180
>gi|296392778|ref|YP_003657662.1| 30S ribosomal protein S9 [Segniliparus rotundus DSM 44985]
gi|296179925|gb|ADG96831.1| ribosomal protein S9 [Segniliparus rotundus DSM 44985]
Length=186
Score = 202 bits (515), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 107/149 (72%), Positives = 116/149 (78%), Gaps = 2/149 (1%)
Query 3 ETTPAPQTPAAPAGPAQSFVLERPIQTVGRRKEAVVRVRLVPGTGKFDLNGRSLEDYFPN 62
ET A PA P + F E I TVGRRKEAVVR+RL GTGKF LNGRSLE+YFPN
Sbjct 40 ETQGAGSAPAREKAPLREFTEE--IITVGRRKEAVVRLRLSLGTGKFTLNGRSLENYFPN 97
Query 63 KVHQQLIKAPLVTVDRVESFDIFAHLGGGGPSGQAGALRLGIARALILVSPEDRPALKKA 122
+VHQQL+K+PLV DR S D+ A L GGG SGQAGALRL ++RALI SPEDRPALK A
Sbjct 98 RVHQQLVKSPLVHADREGSVDVRATLHGGGISGQAGALRLALSRALIEASPEDRPALKVA 157
Query 123 GFLTRDPRATERKKYGLKKARKAPQYSKR 151
GFLTRD RATERKKYGLKKARKAPQYSKR
Sbjct 158 GFLTRDARATERKKYGLKKARKAPQYSKR 186
>gi|340795255|ref|YP_004760718.1| 30S ribosomal protein S9 [Corynebacterium variabile DSM 44702]
gi|340535165|gb|AEK37645.1| 30S ribosomal protein S9 [Corynebacterium variabile DSM 44702]
Length=170
Score = 197 bits (501), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 97/137 (71%), Positives = 112/137 (82%), Gaps = 0/137 (0%)
Query 15 AGPAQSFVLERPIQTVGRRKEAVVRVRLVPGTGKFDLNGRSLEDYFPNKVHQQLIKAPLV 74
A PA + + E PIQTVGRRKEAVVR+R+V G+G+F NGR+LEDYFPNK+HQQLIKAPLV
Sbjct 34 ATPAVADLYEGPIQTVGRRKEAVVRIRMVAGSGQFTCNGRTLEDYFPNKLHQQLIKAPLV 93
Query 75 TVDRVESFDIFAHLGGGGPSGQAGALRLGIARALILVSPEDRPALKKAGFLTRDPRATER 134
+DR FD +L GGGPSGQAGA+RL I+RAL +PE+R ALKKAGFLTRD RA ER
Sbjct 94 LLDRENQFDFQVNLKGGGPSGQAGAMRLAISRALNKYNPEERAALKKAGFLTRDARAVER 153
Query 135 KKYGLKKARKAPQYSKR 151
KK GL KAR+APQYSKR
Sbjct 154 KKAGLHKARRAPQYSKR 170
>gi|68536834|ref|YP_251539.1| 30S ribosomal protein S9 [Corynebacterium jeikeium K411]
gi|260579193|ref|ZP_05847083.1| 30S ribosomal protein S9 [Corynebacterium jeikeium ATCC 43734]
gi|68264433|emb|CAI37921.1| 30S ribosomal protein S9 [Corynebacterium jeikeium K411]
gi|258602679|gb|EEW15966.1| 30S ribosomal protein S9 [Corynebacterium jeikeium ATCC 43734]
Length=186
Score = 196 bits (499), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 98/134 (74%), Positives = 109/134 (82%), Gaps = 0/134 (0%)
Query 18 AQSFVLERPIQTVGRRKEAVVRVRLVPGTGKFDLNGRSLEDYFPNKVHQQLIKAPLVTVD 77
A+ V E IQTVGRRKEAVVRVR+VPG+G+F NGRSLEDYFPNK+HQQLIKAPLV +D
Sbjct 53 AEPVVFEGTIQTVGRRKEAVVRVRMVPGSGEFLCNGRSLEDYFPNKLHQQLIKAPLVLLD 112
Query 78 RVESFDIFAHLGGGGPSGQAGALRLGIARALILVSPEDRPALKKAGFLTRDPRATERKKY 137
R FDI A+L GGGPSGQAGA RL IARAL +P +R LK+AGFLTRD RA ERKK
Sbjct 113 RENQFDIQANLNGGGPSGQAGAFRLAIARALNKYNPAERTDLKRAGFLTRDARAVERKKA 172
Query 138 GLKKARKAPQYSKR 151
GL KAR+APQYSKR
Sbjct 173 GLHKARRAPQYSKR 186
>gi|291298449|ref|YP_003509727.1| 30S ribosomal protein S9 [Stackebrandtia nassauensis DSM 44728]
gi|290567669|gb|ADD40634.1| ribosomal protein S9 [Stackebrandtia nassauensis DSM 44728]
Length=154
Score = 196 bits (498), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 99/151 (66%), Positives = 119/151 (79%), Gaps = 0/151 (0%)
Query 1 MTETTPAPQTPAAPAGPAQSFVLERPIQTVGRRKEAVVRVRLVPGTGKFDLNGRSLEDYF 60
MT PAP + A A + ++RP+QTVGRRK A+VR RLVPGTGKF LNG++LE YF
Sbjct 4 MTPAVPAPTSVPAAPPVAPAIPVDRPVQTVGRRKRAIVRTRLVPGTGKFILNGKTLEGYF 63
Query 61 PNKVHQQLIKAPLVTVDRVESFDIFAHLGGGGPSGQAGALRLGIARALILVSPEDRPALK 120
P+KVHQQ++ PLVT +R E++D+ A+L GGG +GQAGALRLGIARALI + PE R LK
Sbjct 64 PSKVHQQIVAEPLVTTERSETYDVIANLKGGGVTGQAGALRLGIARALIELEPESRGPLK 123
Query 121 KAGFLTRDPRATERKKYGLKKARKAPQYSKR 151
+AG+LTRDPR E KKYGLKKARKAPQYSKR
Sbjct 124 RAGYLTRDPREKESKKYGLKKARKAPQYSKR 154
>gi|225020503|ref|ZP_03709695.1| hypothetical protein CORMATOL_00510 [Corynebacterium matruchotii
ATCC 33806]
gi|224946892|gb|EEG28101.1| hypothetical protein CORMATOL_00510 [Corynebacterium matruchotii
ATCC 33806]
Length=177
Score = 196 bits (497), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 96/128 (75%), Positives = 108/128 (85%), Gaps = 0/128 (0%)
Query 24 ERPIQTVGRRKEAVVRVRLVPGTGKFDLNGRSLEDYFPNKVHQQLIKAPLVTVDRVESFD 83
E PIQTVGRRK A+VRVR+V GTG+F NGR+LE+YFPNK+HQQLIKAPLV +DR FD
Sbjct 50 EGPIQTVGRRKRAIVRVRMVEGTGQFVCNGRTLEEYFPNKLHQQLIKAPLVLIDRDGQFD 109
Query 84 IFAHLGGGGPSGQAGALRLGIARALILVSPEDRPALKKAGFLTRDPRATERKKYGLKKAR 143
I A+L GGGP+GQAGA RL IARAL + +P DRPALKKAGFLTRD RA ERKK GL KAR
Sbjct 110 IHANLTGGGPTGQAGAFRLAIARALNIYNPADRPALKKAGFLTRDARAVERKKAGLHKAR 169
Query 144 KAPQYSKR 151
+APQYSKR
Sbjct 170 RAPQYSKR 177
>gi|336326383|ref|YP_004606349.1| 30S ribosomal protein S9 [Corynebacterium resistens DSM 45100]
gi|336102365|gb|AEI10185.1| 30S ribosomal protein S9 [Corynebacterium resistens DSM 45100]
Length=179
Score = 196 bits (497), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 98/130 (76%), Positives = 109/130 (84%), Gaps = 0/130 (0%)
Query 22 VLERPIQTVGRRKEAVVRVRLVPGTGKFDLNGRSLEDYFPNKVHQQLIKAPLVTVDRVES 81
V + PIQTVGRRKEAVVRVRLV G+G+F NGRSLEDYFPNK+HQQLIKAPLV ++R
Sbjct 50 VFDGPIQTVGRRKEAVVRVRLVAGSGEFTCNGRSLEDYFPNKLHQQLIKAPLVLLEREGQ 109
Query 82 FDIFAHLGGGGPSGQAGALRLGIARALILVSPEDRPALKKAGFLTRDPRATERKKYGLKK 141
FDI A+L GGGPSGQAGA+RL IARAL +PE+R LKKAGFLTRD RA ERKK GL K
Sbjct 110 FDIQANLQGGGPSGQAGAMRLAIARALNKYNPEERTELKKAGFLTRDARAVERKKAGLHK 169
Query 142 ARKAPQYSKR 151
AR+APQYSKR
Sbjct 170 ARRAPQYSKR 179
>gi|305679646|ref|ZP_07402456.1| ribosomal protein S9 [Corynebacterium matruchotii ATCC 14266]
gi|305660266|gb|EFM49763.1| ribosomal protein S9 [Corynebacterium matruchotii ATCC 14266]
Length=177
Score = 194 bits (493), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 95/128 (75%), Positives = 108/128 (85%), Gaps = 0/128 (0%)
Query 24 ERPIQTVGRRKEAVVRVRLVPGTGKFDLNGRSLEDYFPNKVHQQLIKAPLVTVDRVESFD 83
E PIQTVGRRK A+VRVR+V G+G+F NGR+LE+YFPNK+HQQLIKAPLV +DR FD
Sbjct 50 EGPIQTVGRRKRAIVRVRMVEGSGQFVCNGRTLEEYFPNKLHQQLIKAPLVLIDRDGQFD 109
Query 84 IFAHLGGGGPSGQAGALRLGIARALILVSPEDRPALKKAGFLTRDPRATERKKYGLKKAR 143
I A+L GGGP+GQAGA RL IARAL + +P DRPALKKAGFLTRD RA ERKK GL KAR
Sbjct 110 IHANLTGGGPTGQAGAFRLAIARALNIYNPADRPALKKAGFLTRDARAVERKKAGLHKAR 169
Query 144 KAPQYSKR 151
+APQYSKR
Sbjct 170 RAPQYSKR 177
>gi|158317759|ref|YP_001510267.1| 30S ribosomal protein S9 [Frankia sp. EAN1pec]
gi|158113164|gb|ABW15361.1| ribosomal protein S9 [Frankia sp. EAN1pec]
Length=135
Score = 192 bits (488), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 93/124 (75%), Positives = 104/124 (84%), Gaps = 0/124 (0%)
Query 28 QTVGRRKEAVVRVRLVPGTGKFDLNGRSLEDYFPNKVHQQLIKAPLVTVDRVESFDIFAH 87
+ GRRKEAVVRVRL+PGTG ++LNGR LE+YFPNKVHQQL+ PL T++R ES+D+ A
Sbjct 12 RATGRRKEAVVRVRLIPGTGNWNLNGRKLEEYFPNKVHQQLVNEPLKTLERAESYDVVAR 71
Query 88 LGGGGPSGQAGALRLGIARALILVSPEDRPALKKAGFLTRDPRATERKKYGLKKARKAPQ 147
L GGG SGQAGALRL IARALI+V E RP LKKAGFLTRD R ERKKYGLKKARKAPQ
Sbjct 72 LHGGGVSGQAGALRLAIARALIVVDEEARPTLKKAGFLTRDARVKERKKYGLKKARKAPQ 131
Query 148 YSKR 151
YSKR
Sbjct 132 YSKR 135
Lambda K H
0.318 0.136 0.393
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 128896424032
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40