BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv3443c Length=147 Score E Sequences producing significant alignments: (Bits) Value gi|15610579|ref|NP_217960.1| 50S ribosomal protein L13 [Mycobact... 300 4e-80 gi|298526928|ref|ZP_07014337.1| 50S ribosomal protein L13 rplM [... 298 2e-79 gi|339296267|gb|AEJ48378.1| 50S ribosomal protein L13 [Mycobacte... 297 3e-79 gi|240167799|ref|ZP_04746458.1| 50S ribosomal protein L13 [Mycob... 285 1e-75 gi|15827097|ref|NP_301360.1| 50S ribosomal protein L13 [Mycobact... 281 2e-74 gi|296165846|ref|ZP_06848336.1| 50S ribosomal protein L13 [Mycob... 277 4e-73 gi|183981126|ref|YP_001849417.1| 50S ribosomal protein L13, RplM... 276 1e-72 gi|41410343|ref|NP_963179.1| 50S ribosomal protein L13 [Mycobact... 273 8e-72 gi|118616639|ref|YP_904971.1| 50S ribosomal protein L13 [Mycobac... 270 8e-71 gi|333991909|ref|YP_004524523.1| 50S ribosomal protein L13 RplM ... 269 9e-71 gi|120402478|ref|YP_952307.1| 50S ribosomal protein L13 [Mycobac... 259 9e-68 gi|118471450|ref|YP_885936.1| 50S ribosomal protein L13 [Mycobac... 258 3e-67 gi|254821785|ref|ZP_05226786.1| 50S ribosomal protein L13 [Mycob... 256 1e-66 gi|342861882|ref|ZP_08718527.1| 50S ribosomal protein L13 [Mycob... 254 2e-66 gi|108768521|gb|ABG07243.1| LSU ribosomal protein L13P [Mycobact... 254 4e-66 gi|161407224|ref|YP_638299.2| 50S ribosomal protein L13 [Mycobac... 252 1e-65 gi|336441328|gb|AEI54889.1| 50S ribosomal protein L13 [Mycobacte... 249 1e-64 gi|169630831|ref|YP_001704480.1| 50S ribosomal protein L13 [Myco... 248 2e-64 gi|145225526|ref|YP_001136204.1| 50S ribosomal protein L13 [Myco... 247 5e-64 gi|336441332|gb|AEI54891.1| 50S ribosomal protein L13 [Mycobacte... 241 2e-62 gi|336441330|gb|AEI54890.1| 50S ribosomal protein L13 [Mycobacte... 241 2e-62 gi|336441326|gb|AEI54888.1| 50S ribosomal protein L13 [Mycobacte... 238 3e-61 gi|226365639|ref|YP_002783422.1| 50S ribosomal protein L13 [Rhod... 235 2e-60 gi|226305393|ref|YP_002765351.1| 50S ribosomal protein L13 [Rhod... 234 3e-60 gi|111023133|ref|YP_706105.1| 50S ribosomal protein L13 [Rhodoco... 234 3e-60 gi|229489485|ref|ZP_04383348.1| ribosomal protein L13 [Rhodococc... 233 6e-60 gi|333921704|ref|YP_004495285.1| 50S ribosomal protein L13 [Amyc... 231 3e-59 gi|54022833|ref|YP_117075.1| 50S ribosomal protein L13 [Nocardia... 227 4e-58 gi|296138599|ref|YP_003645842.1| 50S ribosomal protein L13 [Tsuk... 226 9e-58 gi|262201640|ref|YP_003272848.1| 50S ribosomal protein L13 [Gord... 224 3e-57 gi|331699125|ref|YP_004335364.1| 50S ribosomal protein L13 [Pseu... 222 1e-56 gi|343925125|ref|ZP_08764657.1| 50S ribosomal protein L13 [Gordo... 222 1e-56 gi|326381863|ref|ZP_08203556.1| 50S ribosomal protein L13 [Gordo... 221 2e-56 gi|312140874|ref|YP_004008210.1| 50S ribosomal protein l13 rplm ... 218 2e-55 gi|319948369|ref|ZP_08022511.1| 50S ribosomal protein L13 [Dietz... 218 3e-55 gi|325000965|ref|ZP_08122077.1| 50S ribosomal protein L13 [Pseud... 214 2e-54 gi|334336219|ref|YP_004541371.1| ribosomal protein L13 [Isopteri... 214 5e-54 gi|317507696|ref|ZP_07965403.1| ribosomal protein L13 [Segnilipa... 213 7e-54 gi|296268587|ref|YP_003651219.1| 50S ribosomal protein L13 [Ther... 212 2e-53 gi|184200292|ref|YP_001854499.1| 50S ribosomal protein L13 [Kocu... 211 3e-53 gi|271962671|ref|YP_003336867.1| 50S ribosomal protein L13 [Stre... 211 4e-53 gi|257069453|ref|YP_003155708.1| 50S ribosomal protein L13P [Bra... 211 4e-53 gi|296392777|ref|YP_003657661.1| 50S ribosomal protein L13 [Segn... 209 9e-53 gi|257054515|ref|YP_003132347.1| 50S ribosomal protein L13 [Sacc... 209 1e-52 gi|297201766|ref|ZP_06919163.1| ribosomal protein L13 [Streptomy... 209 1e-52 gi|256380550|ref|YP_003104210.1| 50S ribosomal protein L13 [Acti... 208 2e-52 gi|332669556|ref|YP_004452564.1| 50S ribosomal protein L13 [Cell... 208 2e-52 gi|302524041|ref|ZP_07276383.1| ribosomal protein L13 [Streptomy... 208 3e-52 gi|254391360|ref|ZP_05006563.1| 50S ribosomal protein L13 [Strep... 208 3e-52 gi|269955469|ref|YP_003325258.1| 50S ribosomal protein L13 [Xyla... 207 3e-52 >gi|15610579|ref|NP_217960.1| 50S ribosomal protein L13 [Mycobacterium tuberculosis H37Rv] gi|15843038|ref|NP_338075.1| 50S ribosomal protein L13 [Mycobacterium tuberculosis CDC1551] gi|31794620|ref|NP_857113.1| 50S ribosomal protein L13 [Mycobacterium bovis AF2122/97] 81 more sequence titles Length=147 Score = 300 bits (768), Expect = 4e-80, Method: Compositional matrix adjust. Identities = 146/147 (99%), Positives = 147/147 (100%), Gaps = 0/147 (0%) Query 1 VPTYAPKAGDTTRSWYVIDATDVVLGRLAVAAANLLRGKHKPTFAPNVDGGDFVIVINAD 60 +PTYAPKAGDTTRSWYVIDATDVVLGRLAVAAANLLRGKHKPTFAPNVDGGDFVIVINAD Sbjct 1 MPTYAPKAGDTTRSWYVIDATDVVLGRLAVAAANLLRGKHKPTFAPNVDGGDFVIVINAD 60 Query 61 KVAISGDKLQHKMVYRHSGYPGGLHKRTIGELMQRHPDRVVEKAILGMLPKNRLSRQIQR 120 KVAISGDKLQHKMVYRHSGYPGGLHKRTIGELMQRHPDRVVEKAILGMLPKNRLSRQIQR Sbjct 61 KVAISGDKLQHKMVYRHSGYPGGLHKRTIGELMQRHPDRVVEKAILGMLPKNRLSRQIQR 120 Query 121 KLRVYAGPEHPHSAQQPVPYELKQVAQ 147 KLRVYAGPEHPHSAQQPVPYELKQVAQ Sbjct 121 KLRVYAGPEHPHSAQQPVPYELKQVAQ 147 >gi|298526928|ref|ZP_07014337.1| 50S ribosomal protein L13 rplM [Mycobacterium tuberculosis 94_M4241A] gi|298496722|gb|EFI32016.1| 50S ribosomal protein L13 rplM [Mycobacterium tuberculosis 94_M4241A] Length=147 Score = 298 bits (762), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 145/147 (99%), Positives = 146/147 (99%), Gaps = 0/147 (0%) Query 1 VPTYAPKAGDTTRSWYVIDATDVVLGRLAVAAANLLRGKHKPTFAPNVDGGDFVIVINAD 60 +PTYAPKAGDTTRSWYVIDATDVVLGRLAVAAANLLRGKHKPTFAPNVDGGDFVIVINAD Sbjct 1 MPTYAPKAGDTTRSWYVIDATDVVLGRLAVAAANLLRGKHKPTFAPNVDGGDFVIVINAD 60 Query 61 KVAISGDKLQHKMVYRHSGYPGGLHKRTIGELMQRHPDRVVEKAILGMLPKNRLSRQIQR 120 KVAISGDKLQHKMVYRHSGYPGGLHKRTIGELMQRHPDRVVEKAILGMLPKNRLSRQIQR Sbjct 61 KVAISGDKLQHKMVYRHSGYPGGLHKRTIGELMQRHPDRVVEKAILGMLPKNRLSRQIQR 120 Query 121 KLRVYAGPEHPHSAQQPVPYELKQVAQ 147 KLRVYAG EHPHSAQQPVPYELKQVAQ Sbjct 121 KLRVYAGAEHPHSAQQPVPYELKQVAQ 147 >gi|339296267|gb|AEJ48378.1| 50S ribosomal protein L13 [Mycobacterium tuberculosis CCDC5079] Length=147 Score = 297 bits (761), Expect = 3e-79, Method: Compositional matrix adjust. Identities = 145/147 (99%), Positives = 146/147 (99%), Gaps = 0/147 (0%) Query 1 VPTYAPKAGDTTRSWYVIDATDVVLGRLAVAAANLLRGKHKPTFAPNVDGGDFVIVINAD 60 +PTYAPKAGDTTRSWYVIDATDVVLGRLAVAAANLLRGKHKPTFAPNVDGGDFVIVINAD Sbjct 1 MPTYAPKAGDTTRSWYVIDATDVVLGRLAVAAANLLRGKHKPTFAPNVDGGDFVIVINAD 60 Query 61 KVAISGDKLQHKMVYRHSGYPGGLHKRTIGELMQRHPDRVVEKAILGMLPKNRLSRQIQR 120 KVAISGDKLQHKMVYRHSGYPGGLHKRTIGELMQRHPDRVVEKAILGMLPKNR SRQIQR Sbjct 61 KVAISGDKLQHKMVYRHSGYPGGLHKRTIGELMQRHPDRVVEKAILGMLPKNRRSRQIQR 120 Query 121 KLRVYAGPEHPHSAQQPVPYELKQVAQ 147 KLRVYAGPEHPHSAQQPVPYELKQVAQ Sbjct 121 KLRVYAGPEHPHSAQQPVPYELKQVAQ 147 >gi|240167799|ref|ZP_04746458.1| 50S ribosomal protein L13 [Mycobacterium kansasii ATCC 12478] Length=147 Score = 285 bits (729), Expect = 1e-75, Method: Compositional matrix adjust. Identities = 134/147 (92%), Positives = 145/147 (99%), Gaps = 0/147 (0%) Query 1 VPTYAPKAGDTTRSWYVIDATDVVLGRLAVAAANLLRGKHKPTFAPNVDGGDFVIVINAD 60 +PTYAPKAGDTTRSWYVIDATDVVLGRLAVAAANLLRGKHKPTFAPNVDGGDFVI++NAD Sbjct 1 MPTYAPKAGDTTRSWYVIDATDVVLGRLAVAAANLLRGKHKPTFAPNVDGGDFVIIVNAD 60 Query 61 KVAISGDKLQHKMVYRHSGYPGGLHKRTIGELMQRHPDRVVEKAILGMLPKNRLSRQIQR 120 KVAISGDKL+HKM YRHSGYPGGL KRTIGELMQ+HPDRVVEKAI+GMLPKN+LSR+IQR Sbjct 61 KVAISGDKLRHKMAYRHSGYPGGLRKRTIGELMQKHPDRVVEKAIVGMLPKNKLSREIQR 120 Query 121 KLRVYAGPEHPHSAQQPVPYELKQVAQ 147 KLRVYAGPEHPH+AQQPVP+E+KQVAQ Sbjct 121 KLRVYAGPEHPHTAQQPVPFEIKQVAQ 147 >gi|15827097|ref|NP_301360.1| 50S ribosomal protein L13 [Mycobacterium leprae TN] gi|221229575|ref|YP_002502991.1| 50S ribosomal protein L13 [Mycobacterium leprae Br4923] gi|585864|sp|P38014.1|RL13_MYCLE RecName: Full=50S ribosomal protein L13 gi|254798507|sp|B8ZUB9.1|RL13_MYCLB RecName: Full=50S ribosomal protein L13 gi|467123|gb|AAA17305.1| rplM [Mycobacterium leprae] gi|13092645|emb|CAC29872.1| 50S ribosomal protein L13 [Mycobacterium leprae] gi|219932682|emb|CAR70457.1| 50S ribosomal protein L13 [Mycobacterium leprae Br4923] Length=147 Score = 281 bits (719), Expect = 2e-74, Method: Compositional matrix adjust. Identities = 134/147 (92%), Positives = 142/147 (97%), Gaps = 0/147 (0%) Query 1 VPTYAPKAGDTTRSWYVIDATDVVLGRLAVAAANLLRGKHKPTFAPNVDGGDFVIVINAD 60 +PTYAPKAGDTT SWYVIDATDVVLGRLA AA LLRGKHKPTFAPNVDGGDFVIVINAD Sbjct 1 MPTYAPKAGDTTCSWYVIDATDVVLGRLAAVAATLLRGKHKPTFAPNVDGGDFVIVINAD 60 Query 61 KVAISGDKLQHKMVYRHSGYPGGLHKRTIGELMQRHPDRVVEKAILGMLPKNRLSRQIQR 120 KVAISGDK+QHKMVYRHSGYPGGL KRTIGELMQ+HPDRVVEKAI+GMLPKN+LSRQIQR Sbjct 61 KVAISGDKVQHKMVYRHSGYPGGLRKRTIGELMQKHPDRVVEKAIVGMLPKNKLSRQIQR 120 Query 121 KLRVYAGPEHPHSAQQPVPYELKQVAQ 147 KLRVYAGP+HPHSAQQPVP+E+KQVAQ Sbjct 121 KLRVYAGPDHPHSAQQPVPFEIKQVAQ 147 >gi|296165846|ref|ZP_06848336.1| 50S ribosomal protein L13 [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295898802|gb|EFG78318.1| 50S ribosomal protein L13 [Mycobacterium parascrofulaceum ATCC BAA-614] Length=147 Score = 277 bits (709), Expect = 4e-73, Method: Compositional matrix adjust. Identities = 131/147 (90%), Positives = 141/147 (96%), Gaps = 0/147 (0%) Query 1 VPTYAPKAGDTTRSWYVIDATDVVLGRLAVAAANLLRGKHKPTFAPNVDGGDFVIVINAD 60 +PTYAPKAGDTTRSWYVIDATDVVLGRLAVAAA LLRGKHKPTFAPNVDGGDFVIVINAD Sbjct 1 MPTYAPKAGDTTRSWYVIDATDVVLGRLAVAAATLLRGKHKPTFAPNVDGGDFVIVINAD 60 Query 61 KVAISGDKLQHKMVYRHSGYPGGLHKRTIGELMQRHPDRVVEKAILGMLPKNRLSRQIQR 120 KVA+SGDKLQ K+ YRHSGYPGGLH RT GELM++HPDRVVEKAI+GMLPKN+LSRQIQR Sbjct 61 KVALSGDKLQSKLAYRHSGYPGGLHSRTTGELMEKHPDRVVEKAIVGMLPKNKLSRQIQR 120 Query 121 KLRVYAGPEHPHSAQQPVPYELKQVAQ 147 KL VYAGPEHPH+AQ+PVPYE+KQVAQ Sbjct 121 KLHVYAGPEHPHAAQKPVPYEIKQVAQ 147 >gi|183981126|ref|YP_001849417.1| 50S ribosomal protein L13, RplM [Mycobacterium marinum M] gi|226702885|sp|B2HCZ0.1|RL13_MYCMM RecName: Full=50S ribosomal protein L13 gi|183174452|gb|ACC39562.1| 50S ribosomal protein L13, RplM [Mycobacterium marinum M] Length=147 Score = 276 bits (705), Expect = 1e-72, Method: Compositional matrix adjust. Identities = 130/147 (89%), Positives = 142/147 (97%), Gaps = 0/147 (0%) Query 1 VPTYAPKAGDTTRSWYVIDATDVVLGRLAVAAANLLRGKHKPTFAPNVDGGDFVIVINAD 60 +PTYAPKAGDTTRSWYVIDATDVVLGRLAVAAANLLRGKHKPTFAPNVDGGDFVIVINAD Sbjct 1 MPTYAPKAGDTTRSWYVIDATDVVLGRLAVAAANLLRGKHKPTFAPNVDGGDFVIVINAD 60 Query 61 KVAISGDKLQHKMVYRHSGYPGGLHKRTIGELMQRHPDRVVEKAILGMLPKNRLSRQIQR 120 KVAIS +KL++KM Y HSGYPGGL KR+IGELM++HPDRVVEKAI+GMLPKN+LSRQIQ Sbjct 61 KVAISNEKLRNKMAYSHSGYPGGLRKRSIGELMEKHPDRVVEKAIVGMLPKNKLSRQIQS 120 Query 121 KLRVYAGPEHPHSAQQPVPYELKQVAQ 147 KLRVYAGPEHPH+AQQPVP+E+KQVAQ Sbjct 121 KLRVYAGPEHPHTAQQPVPFEIKQVAQ 147 >gi|41410343|ref|NP_963179.1| 50S ribosomal protein L13 [Mycobacterium avium subsp. paratuberculosis K-10] gi|118466515|ref|YP_883521.1| 50S ribosomal protein L13 [Mycobacterium avium 104] gi|254776816|ref|ZP_05218332.1| 50S ribosomal protein L13 [Mycobacterium avium subsp. avium ATCC 25291] gi|81700271|sp|Q73S31.1|RL13_MYCPA RecName: Full=50S ribosomal protein L13 gi|166230996|sp|A0QKT3.1|RL13_MYCA1 RecName: Full=50S ribosomal protein L13 gi|41399177|gb|AAS06795.1| RplM [Mycobacterium avium subsp. paratuberculosis K-10] gi|118167802|gb|ABK68699.1| ribosomal protein L13 [Mycobacterium avium 104] gi|336460692|gb|EGO39582.1| ribosomal protein L13, bacterial type [Mycobacterium avium subsp. paratuberculosis S397] Length=147 Score = 273 bits (697), Expect = 8e-72, Method: Compositional matrix adjust. Identities = 129/147 (88%), Positives = 138/147 (94%), Gaps = 0/147 (0%) Query 1 VPTYAPKAGDTTRSWYVIDATDVVLGRLAVAAANLLRGKHKPTFAPNVDGGDFVIVINAD 60 +PTYAPKAGDTTRSWYVIDATDVVLGRLAVAAANLLRGKHKPTFAPNVDGGDFVIV+NAD Sbjct 1 MPTYAPKAGDTTRSWYVIDATDVVLGRLAVAAANLLRGKHKPTFAPNVDGGDFVIVVNAD 60 Query 61 KVAISGDKLQHKMVYRHSGYPGGLHKRTIGELMQRHPDRVVEKAILGMLPKNRLSRQIQR 120 KVA SG KL K+ YRHSGYPGGL RTIGELMQ+HPDRVV AI+GMLPKN+LSRQIQR Sbjct 61 KVAFSGQKLDKKLAYRHSGYPGGLRSRTIGELMQKHPDRVVADAIVGMLPKNKLSRQIQR 120 Query 121 KLRVYAGPEHPHSAQQPVPYELKQVAQ 147 KLRVYAGPEHPH+AQQP+PYE+KQVAQ Sbjct 121 KLRVYAGPEHPHTAQQPIPYEIKQVAQ 147 >gi|118616639|ref|YP_904971.1| 50S ribosomal protein L13 [Mycobacterium ulcerans Agy99] gi|166231000|sp|A0PMD1.1|RL13_MYCUA RecName: Full=50S ribosomal protein L13 gi|118568749|gb|ABL03500.1| 50S ribosomal protein L13, RplM [Mycobacterium ulcerans Agy99] Length=147 Score = 270 bits (689), Expect = 8e-71, Method: Compositional matrix adjust. Identities = 128/147 (88%), Positives = 140/147 (96%), Gaps = 0/147 (0%) Query 1 VPTYAPKAGDTTRSWYVIDATDVVLGRLAVAAANLLRGKHKPTFAPNVDGGDFVIVINAD 60 +PTYAPKAGDTTRSWYVIDATDVVLGRLAVAAANLLRGKHKPTFAPNVDGGDFVIVINAD Sbjct 1 MPTYAPKAGDTTRSWYVIDATDVVLGRLAVAAANLLRGKHKPTFAPNVDGGDFVIVINAD 60 Query 61 KVAISGDKLQHKMVYRHSGYPGGLHKRTIGELMQRHPDRVVEKAILGMLPKNRLSRQIQR 120 KVAIS +KL++K Y HSGYPGGL KR+IGELM++HPDRVVEKAI+GMLPKN+LSRQIQ Sbjct 61 KVAISNEKLRNKRAYSHSGYPGGLRKRSIGELMEKHPDRVVEKAIVGMLPKNKLSRQIQS 120 Query 121 KLRVYAGPEHPHSAQQPVPYELKQVAQ 147 KLRVYAGP HPH+AQQPVP+E+KQVAQ Sbjct 121 KLRVYAGPGHPHTAQQPVPFEIKQVAQ 147 >gi|333991909|ref|YP_004524523.1| 50S ribosomal protein L13 RplM [Mycobacterium sp. JDM601] gi|333487877|gb|AEF37269.1| 50S ribosomal protein L13 RplM [Mycobacterium sp. JDM601] Length=147 Score = 269 bits (688), Expect = 9e-71, Method: Compositional matrix adjust. Identities = 127/147 (87%), Positives = 137/147 (94%), Gaps = 0/147 (0%) Query 1 VPTYAPKAGDTTRSWYVIDATDVVLGRLAVAAANLLRGKHKPTFAPNVDGGDFVIVINAD 60 +PTY PKAGDTTRSWYVIDATDVVLGRLAVAAA LLRGKHKPTF PNVDGGDFVIVINAD Sbjct 1 MPTYTPKAGDTTRSWYVIDATDVVLGRLAVAAATLLRGKHKPTFTPNVDGGDFVIVINAD 60 Query 61 KVAISGDKLQHKMVYRHSGYPGGLHKRTIGELMQRHPDRVVEKAILGMLPKNRLSRQIQR 120 KVAISGDKLQ KM YRHSGYPGGL KR++GELM+R+PDRVVEKAI+GMLPK +L RQI+ Sbjct 61 KVAISGDKLQKKMAYRHSGYPGGLRKRSLGELMERNPDRVVEKAIIGMLPKTKLGRQIKT 120 Query 121 KLRVYAGPEHPHSAQQPVPYELKQVAQ 147 KLRVYAGPEHPH+AQQPVPYE+KQV Q Sbjct 121 KLRVYAGPEHPHTAQQPVPYEIKQVTQ 147 >gi|120402478|ref|YP_952307.1| 50S ribosomal protein L13 [Mycobacterium vanbaalenii PYR-1] gi|166231001|sp|A1T551.1|RL13_MYCVP RecName: Full=50S ribosomal protein L13 gi|119955296|gb|ABM12301.1| LSU ribosomal protein L13P [Mycobacterium vanbaalenii PYR-1] Length=147 Score = 259 bits (662), Expect = 9e-68, Method: Compositional matrix adjust. Identities = 120/145 (83%), Positives = 133/145 (92%), Gaps = 0/145 (0%) Query 3 TYAPKAGDTTRSWYVIDATDVVLGRLAVAAANLLRGKHKPTFAPNVDGGDFVIVINADKV 62 TY PKAGDTTR+WYVIDATDVVLGRLAV AA LLRGKHKPTF PNVDGGDFVIVINADK+ Sbjct 3 TYTPKAGDTTRTWYVIDATDVVLGRLAVEAAKLLRGKHKPTFTPNVDGGDFVIVINADKI 62 Query 63 AISGDKLQHKMVYRHSGYPGGLHKRTIGELMQRHPDRVVEKAILGMLPKNRLSRQIQRKL 122 A+SGDKL K YRHSGYPGGL KR+IGEL+Q+HP RVVE AI+GMLP N+LSRQ+Q+KL Sbjct 63 ALSGDKLNKKFAYRHSGYPGGLRKRSIGELLQKHPTRVVENAIVGMLPHNKLSRQVQKKL 122 Query 123 RVYAGPEHPHSAQQPVPYELKQVAQ 147 +VYAGPEHPHSAQQPVP+E+KQVAQ Sbjct 123 KVYAGPEHPHSAQQPVPFEIKQVAQ 147 >gi|118471450|ref|YP_885936.1| 50S ribosomal protein L13 [Mycobacterium smegmatis str. MC2 155] gi|166230998|sp|A0QSP8.1|RL13_MYCS2 RecName: Full=50S ribosomal protein L13 gi|118172737|gb|ABK73633.1| ribosomal protein L13 [Mycobacterium smegmatis str. MC2 155] Length=147 Score = 258 bits (658), Expect = 3e-67, Method: Compositional matrix adjust. Identities = 118/147 (81%), Positives = 134/147 (92%), Gaps = 0/147 (0%) Query 1 VPTYAPKAGDTTRSWYVIDATDVVLGRLAVAAANLLRGKHKPTFAPNVDGGDFVIVINAD 60 +PTY PKAGDTTRSWYVIDA+DVVLGRLA AAA LLRGKHKPTF PNVDGGDFVIVINAD Sbjct 1 MPTYTPKAGDTTRSWYVIDASDVVLGRLASAAATLLRGKHKPTFTPNVDGGDFVIVINAD 60 Query 61 KVAISGDKLQHKMVYRHSGYPGGLHKRTIGELMQRHPDRVVEKAILGMLPKNRLSRQIQR 120 K+A+SGDKL K YRHSGYPGGL KRTIGEL+++HP RVVE AI+GMLP N+L RQIQ+ Sbjct 61 KIAVSGDKLTKKFAYRHSGYPGGLRKRTIGELLEKHPTRVVENAIIGMLPHNKLGRQIQK 120 Query 121 KLRVYAGPEHPHSAQQPVPYELKQVAQ 147 KL+VYAGP+HPH+AQQP+P+E+KQVAQ Sbjct 121 KLKVYAGPDHPHAAQQPIPFEIKQVAQ 147 >gi|254821785|ref|ZP_05226786.1| 50S ribosomal protein L13 [Mycobacterium intracellulare ATCC 13950] Length=147 Score = 256 bits (653), Expect = 1e-66, Method: Compositional matrix adjust. Identities = 123/147 (84%), Positives = 131/147 (90%), Gaps = 0/147 (0%) Query 1 VPTYAPKAGDTTRSWYVIDATDVVLGRLAVAAANLLRGKHKPTFAPNVDGGDFVIVINAD 60 +PTY PKAGDTTRSW+VIDATDVVLGRLAVAAANLLRGKHKPTF PNVDGGDFVIVINAD Sbjct 1 MPTYTPKAGDTTRSWHVIDATDVVLGRLAVAAANLLRGKHKPTFTPNVDGGDFVIVINAD 60 Query 61 KVAISGDKLQHKMVYRHSGYPGGLHKRTIGELMQRHPDRVVEKAILGMLPKNRLSRQIQR 120 KVA SG KL K+ YRHSGYPGGL RTI ELM +HPDRVVE AI+GMLPKN+L+RQI R Sbjct 61 KVAFSGQKLDKKLAYRHSGYPGGLSSRTIRELMAKHPDRVVEDAIVGMLPKNKLARQIAR 120 Query 121 KLRVYAGPEHPHSAQQPVPYELKQVAQ 147 KL VYAGP HPH AQQPVPYE+KQVAQ Sbjct 121 KLHVYAGPTHPHVAQQPVPYEIKQVAQ 147 >gi|342861882|ref|ZP_08718527.1| 50S ribosomal protein L13 [Mycobacterium colombiense CECT 3035] gi|342130699|gb|EGT84003.1| 50S ribosomal protein L13 [Mycobacterium colombiense CECT 3035] Length=147 Score = 254 bits (650), Expect = 2e-66, Method: Compositional matrix adjust. Identities = 122/147 (83%), Positives = 131/147 (90%), Gaps = 0/147 (0%) Query 1 VPTYAPKAGDTTRSWYVIDATDVVLGRLAVAAANLLRGKHKPTFAPNVDGGDFVIVINAD 60 +PTY PKAGDTTRSW+VIDATDVVLGRLAVAAA LLRGKHKPTF PNVDGGDFVIVINAD Sbjct 1 MPTYTPKAGDTTRSWHVIDATDVVLGRLAVAAATLLRGKHKPTFTPNVDGGDFVIVINAD 60 Query 61 KVAISGDKLQHKMVYRHSGYPGGLHKRTIGELMQRHPDRVVEKAILGMLPKNRLSRQIQR 120 KVA SG KL K+ YRHSGYPGGL RTI ELM +HPDRVVE AI+GMLPKN+L+RQI R Sbjct 61 KVAFSGQKLDKKLAYRHSGYPGGLSSRTIRELMDKHPDRVVEDAIVGMLPKNKLARQIAR 120 Query 121 KLRVYAGPEHPHSAQQPVPYELKQVAQ 147 KL VYAGP HPH+AQQPVPYE+KQVAQ Sbjct 121 KLHVYAGPTHPHAAQQPVPYEIKQVAQ 147 >gi|108768521|gb|ABG07243.1| LSU ribosomal protein L13P [Mycobacterium sp. MCS] gi|119693287|gb|ABL90360.1| LSU ribosomal protein L13P [Mycobacterium sp. KMS] gi|126233560|gb|ABN96960.1| LSU ribosomal protein L13P [Mycobacterium sp. JLS] Length=153 Score = 254 bits (648), Expect = 4e-66, Method: Compositional matrix adjust. Identities = 117/147 (80%), Positives = 133/147 (91%), Gaps = 0/147 (0%) Query 1 VPTYAPKAGDTTRSWYVIDATDVVLGRLAVAAANLLRGKHKPTFAPNVDGGDFVIVINAD 60 VPTY PKAGDTTRSWYVIDATDVVLGRLAV AA LLRGKHKPTF PNVDGGDFVIVINA+ Sbjct 7 VPTYTPKAGDTTRSWYVIDATDVVLGRLAVEAAKLLRGKHKPTFTPNVDGGDFVIVINAE 66 Query 61 KVAISGDKLQHKMVYRHSGYPGGLHKRTIGELMQRHPDRVVEKAILGMLPKNRLSRQIQR 120 K+A+SGDKL +K YRHSGYPGGL +RTIGEL+ +HP RVVE AI+GMLP +LSRQ+Q+ Sbjct 67 KIAVSGDKLNNKYAYRHSGYPGGLRRRTIGELLIKHPTRVVENAIVGMLPHTKLSRQVQK 126 Query 121 KLRVYAGPEHPHSAQQPVPYELKQVAQ 147 KL+VYAGP HPH+AQQP+P+E+KQVAQ Sbjct 127 KLKVYAGPNHPHAAQQPIPFEIKQVAQ 153 >gi|161407224|ref|YP_638299.2| 50S ribosomal protein L13 [Mycobacterium sp. MCS] gi|161407958|ref|YP_001069451.2| 50S ribosomal protein L13 [Mycobacterium sp. JLS] gi|161485586|ref|YP_937150.2| 50S ribosomal protein L13 [Mycobacterium sp. KMS] Length=147 Score = 252 bits (644), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 116/147 (79%), Positives = 133/147 (91%), Gaps = 0/147 (0%) Query 1 VPTYAPKAGDTTRSWYVIDATDVVLGRLAVAAANLLRGKHKPTFAPNVDGGDFVIVINAD 60 +PTY PKAGDTTRSWYVIDATDVVLGRLAV AA LLRGKHKPTF PNVDGGDFVIVINA+ Sbjct 1 MPTYTPKAGDTTRSWYVIDATDVVLGRLAVEAAKLLRGKHKPTFTPNVDGGDFVIVINAE 60 Query 61 KVAISGDKLQHKMVYRHSGYPGGLHKRTIGELMQRHPDRVVEKAILGMLPKNRLSRQIQR 120 K+A+SGDKL +K YRHSGYPGGL +RTIGEL+ +HP RVVE AI+GMLP +LSRQ+Q+ Sbjct 61 KIAVSGDKLNNKYAYRHSGYPGGLRRRTIGELLIKHPTRVVENAIVGMLPHTKLSRQVQK 120 Query 121 KLRVYAGPEHPHSAQQPVPYELKQVAQ 147 KL+VYAGP HPH+AQQP+P+E+KQVAQ Sbjct 121 KLKVYAGPNHPHAAQQPIPFEIKQVAQ 147 >gi|336441328|gb|AEI54889.1| 50S ribosomal protein L13 [Mycobacterium bolletii] Length=147 Score = 249 bits (636), Expect = 1e-64, Method: Compositional matrix adjust. Identities = 113/147 (77%), Positives = 134/147 (92%), Gaps = 0/147 (0%) Query 1 VPTYAPKAGDTTRSWYVIDATDVVLGRLAVAAANLLRGKHKPTFAPNVDGGDFVIVINAD 60 +PTY PKAGD TRSWYVIDATDVVLGRLAV AANLLRGKHKPTFAP+VDGGDFVI+INA+ Sbjct 1 MPTYTPKAGDVTRSWYVIDATDVVLGRLAVQAANLLRGKHKPTFAPHVDGGDFVIIINAE 60 Query 61 KVAISGDKLQHKMVYRHSGYPGGLHKRTIGELMQRHPDRVVEKAILGMLPKNRLSRQIQR 120 K+A+SG+KL +K YRHSG+PGGL KR+IGE +++ P R VEKAI+GMLPKN+L RQI+R Sbjct 61 KIALSGNKLTNKFAYRHSGFPGGLSKRSIGEQLEKFPTRTVEKAIVGMLPKNKLGRQIER 120 Query 121 KLRVYAGPEHPHSAQQPVPYELKQVAQ 147 KL+VYAG EHPH+AQQP+P+E+KQVAQ Sbjct 121 KLKVYAGAEHPHAAQQPIPFEIKQVAQ 147 >gi|169630831|ref|YP_001704480.1| 50S ribosomal protein L13 [Mycobacterium abscessus ATCC 19977] gi|226702883|sp|B1MG81.1|RL13_MYCA9 RecName: Full=50S ribosomal protein L13 gi|169242798|emb|CAM63826.1| 50S ribosomal protein L13 [Mycobacterium abscessus] gi|336441324|gb|AEI54887.1| 50S ribosomal protein L13 [Mycobacterium abscessus] gi|336441334|gb|AEI54892.1| 50S ribosomal protein L13 [Mycobacterium massiliense] Length=147 Score = 248 bits (633), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 112/147 (77%), Positives = 134/147 (92%), Gaps = 0/147 (0%) Query 1 VPTYAPKAGDTTRSWYVIDATDVVLGRLAVAAANLLRGKHKPTFAPNVDGGDFVIVINAD 60 +PTY PKAGD TR+WYVIDATDVVLGRLAV AANLLRGKHKPTFAP+VDGGDFVI+INA+ Sbjct 1 MPTYTPKAGDVTRTWYVIDATDVVLGRLAVQAANLLRGKHKPTFAPHVDGGDFVIIINAE 60 Query 61 KVAISGDKLQHKMVYRHSGYPGGLHKRTIGELMQRHPDRVVEKAILGMLPKNRLSRQIQR 120 K+A+SG+KL +K YRHSG+PGGL KR+IGE +++ P R VEKAI+GMLPKN+L RQI+R Sbjct 61 KIALSGNKLTNKFAYRHSGFPGGLSKRSIGEQLEKFPTRTVEKAIVGMLPKNKLGRQIER 120 Query 121 KLRVYAGPEHPHSAQQPVPYELKQVAQ 147 KL+VYAG EHPH+AQQP+P+E+KQVAQ Sbjct 121 KLKVYAGAEHPHAAQQPIPFEIKQVAQ 147 >gi|145225526|ref|YP_001136204.1| 50S ribosomal protein L13 [Mycobacterium gilvum PYR-GCK] gi|315445879|ref|YP_004078758.1| 50S ribosomal protein L13P [Mycobacterium sp. Spyr1] gi|189041010|sp|A4TEL3.1|RL13_MYCGI RecName: Full=50S ribosomal protein L13 gi|145218012|gb|ABP47416.1| LSU ribosomal protein L13P [Mycobacterium gilvum PYR-GCK] gi|315264182|gb|ADU00924.1| LSU ribosomal protein L13P [Mycobacterium sp. Spyr1] Length=147 Score = 247 bits (630), Expect = 5e-64, Method: Compositional matrix adjust. Identities = 114/145 (79%), Positives = 127/145 (88%), Gaps = 0/145 (0%) Query 3 TYAPKAGDTTRSWYVIDATDVVLGRLAVAAANLLRGKHKPTFAPNVDGGDFVIVINADKV 62 TY PKAGDTTRSWYVIDATDVVLGRLAV AA LLRGKHKPTF PNVDGGDFVI+INADK+ Sbjct 3 TYTPKAGDTTRSWYVIDATDVVLGRLAVEAAKLLRGKHKPTFTPNVDGGDFVIIINADKI 62 Query 63 AISGDKLQHKMVYRHSGYPGGLHKRTIGELMQRHPDRVVEKAILGMLPKNRLSRQIQRKL 122 ++SGDKL K Y HSGYPGGL KR IG+L+ +HP RVVE AI GMLP +L RQIQ+KL Sbjct 63 SLSGDKLTKKFAYSHSGYPGGLRKRAIGDLLAKHPTRVVENAITGMLPHTKLGRQIQKKL 122 Query 123 RVYAGPEHPHSAQQPVPYELKQVAQ 147 +VYAGPEHPH+AQQPVP+E+KQVAQ Sbjct 123 KVYAGPEHPHTAQQPVPFEIKQVAQ 147 >gi|336441332|gb|AEI54891.1| 50S ribosomal protein L13 [Mycobacterium immunogenum] Length=147 Score = 241 bits (616), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 108/147 (74%), Positives = 131/147 (90%), Gaps = 0/147 (0%) Query 1 VPTYAPKAGDTTRSWYVIDATDVVLGRLAVAAANLLRGKHKPTFAPNVDGGDFVIVINAD 60 +PTY PKAGD T SWYVIDATDVVLGRLAV AA LLRGKHKPT+AP+ DGGDFV++INA+ Sbjct 1 MPTYTPKAGDITTSWYVIDATDVVLGRLAVQAATLLRGKHKPTYAPHADGGDFVVIINAE 60 Query 61 KVAISGDKLQHKMVYRHSGYPGGLHKRTIGELMQRHPDRVVEKAILGMLPKNRLSRQIQR 120 K+A+SG+KL K YRHSG+PGGL KR++GE +++ P R VEKAI+GMLPKN+L RQI+R Sbjct 61 KIALSGNKLTDKFAYRHSGFPGGLRKRSVGEQLEKFPTRTVEKAIIGMLPKNKLGRQIER 120 Query 121 KLRVYAGPEHPHSAQQPVPYELKQVAQ 147 KL+VYAGPEHPH+AQQP+P+E+KQVAQ Sbjct 121 KLKVYAGPEHPHAAQQPIPFEIKQVAQ 147 >gi|336441330|gb|AEI54890.1| 50S ribosomal protein L13 [Mycobacterium chelonae] Length=147 Score = 241 bits (616), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 109/147 (75%), Positives = 130/147 (89%), Gaps = 0/147 (0%) Query 1 VPTYAPKAGDTTRSWYVIDATDVVLGRLAVAAANLLRGKHKPTFAPNVDGGDFVIVINAD 60 +PTY PKAGD T SWYVIDATDVVLGRLAV AA LLRGKHKPT+AP+ DGGDFV++INA+ Sbjct 1 MPTYTPKAGDITTSWYVIDATDVVLGRLAVQAATLLRGKHKPTYAPHADGGDFVVIINAE 60 Query 61 KVAISGDKLQHKMVYRHSGYPGGLHKRTIGELMQRHPDRVVEKAILGMLPKNRLSRQIQR 120 K+A+SG KL K YRHSG+PGGL KR+IGE +++ P R VEKAI+GMLPKN+L RQI+R Sbjct 61 KIALSGKKLTDKFAYRHSGFPGGLRKRSIGEQLEKFPTRTVEKAIIGMLPKNKLGRQIER 120 Query 121 KLRVYAGPEHPHSAQQPVPYELKQVAQ 147 KL+VYAGPEHPH+AQQP+P+E+KQVAQ Sbjct 121 KLKVYAGPEHPHAAQQPIPFEIKQVAQ 147 >gi|336441326|gb|AEI54888.1| 50S ribosomal protein L13 [Mycobacterium franklinii] Length=147 Score = 238 bits (606), Expect = 3e-61, Method: Compositional matrix adjust. Identities = 107/147 (73%), Positives = 129/147 (88%), Gaps = 0/147 (0%) Query 1 VPTYAPKAGDTTRSWYVIDATDVVLGRLAVAAANLLRGKHKPTFAPNVDGGDFVIVINAD 60 +PTY PKAGD T SWYVIDATDVVLGRLAV AA LLRGKHKPT+AP+ DGGDFV++INA+ Sbjct 1 MPTYTPKAGDITTSWYVIDATDVVLGRLAVQAATLLRGKHKPTYAPHADGGDFVVIINAE 60 Query 61 KVAISGDKLQHKMVYRHSGYPGGLHKRTIGELMQRHPDRVVEKAILGMLPKNRLSRQIQR 120 K+A+SG KL K YRHSG+PGGL KR++GE +++ P R VEKAI+GMLPKN+L RQI+R Sbjct 61 KIALSGKKLTDKFAYRHSGFPGGLRKRSMGEQLEKFPTRTVEKAIIGMLPKNKLGRQIER 120 Query 121 KLRVYAGPEHPHSAQQPVPYELKQVAQ 147 KL+VYAG EHPH+AQQP+P+E+KQVAQ Sbjct 121 KLKVYAGAEHPHAAQQPIPFEIKQVAQ 147 >gi|226365639|ref|YP_002783422.1| 50S ribosomal protein L13 [Rhodococcus opacus B4] gi|254798511|sp|C1B056.1|RL13_RHOOB RecName: Full=50S ribosomal protein L13 gi|226244129|dbj|BAH54477.1| 50S ribosomal protein L13 [Rhodococcus opacus B4] Length=147 Score = 235 bits (600), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 107/145 (74%), Positives = 130/145 (90%), Gaps = 0/145 (0%) Query 3 TYAPKAGDTTRSWYVIDATDVVLGRLAVAAANLLRGKHKPTFAPNVDGGDFVIVINADKV 62 TY PKAGD TR+W+VIDATDVVLGRLAV AANLLRGKHKPTFAP+VDGGDFV++INADKV Sbjct 3 TYTPKAGDVTRTWHVIDATDVVLGRLAVQAANLLRGKHKPTFAPHVDGGDFVVIINADKV 62 Query 63 AISGDKLQHKMVYRHSGYPGGLHKRTIGELMQRHPDRVVEKAILGMLPKNRLSRQIQRKL 122 AISG+K + K +Y HSG+PGGL R++GE++ ++PDR+VEKA++GMLPKN+L R I KL Sbjct 63 AISGNKREGKFLYHHSGHPGGLKSRSVGEVLDKNPDRLVEKAVVGMLPKNKLGRAISSKL 122 Query 123 RVYAGPEHPHSAQQPVPYELKQVAQ 147 +VYAGP HPH+AQQPVP+E+KQVAQ Sbjct 123 KVYAGPNHPHAAQQPVPFEIKQVAQ 147 >gi|226305393|ref|YP_002765351.1| 50S ribosomal protein L13 [Rhodococcus erythropolis PR4] gi|259645565|sp|C0ZW77.1|RL13_RHOE4 RecName: Full=50S ribosomal protein L13 gi|226184508|dbj|BAH32612.1| 50S ribosomal protein L13 [Rhodococcus erythropolis PR4] Length=147 Score = 234 bits (598), Expect = 3e-60, Method: Compositional matrix adjust. Identities = 108/145 (75%), Positives = 128/145 (89%), Gaps = 0/145 (0%) Query 3 TYAPKAGDTTRSWYVIDATDVVLGRLAVAAANLLRGKHKPTFAPNVDGGDFVIVINADKV 62 TY PKAGD T SW+VIDATDVVLGRLAV AANLLRGKHKPT+AP++DGGDFV++INA+KV Sbjct 3 TYTPKAGDVTHSWHVIDATDVVLGRLAVQAANLLRGKHKPTYAPHIDGGDFVVIINAEKV 62 Query 63 AISGDKLQHKMVYRHSGYPGGLHKRTIGELMQRHPDRVVEKAILGMLPKNRLSRQIQRKL 122 AISG+KLQ K VY HSG+PGGL RT+GE++ R PDR+VEKAI+GMLPK +L R + KL Sbjct 63 AISGNKLQGKNVYHHSGFPGGLKSRTVGEVLDRTPDRLVEKAIVGMLPKTKLGRAMSSKL 122 Query 123 RVYAGPEHPHSAQQPVPYELKQVAQ 147 +VYAGP HPH+AQQPVP+E+KQVAQ Sbjct 123 KVYAGPNHPHTAQQPVPFEIKQVAQ 147 >gi|111023133|ref|YP_706105.1| 50S ribosomal protein L13 [Rhodococcus jostii RHA1] gi|122955184|sp|Q0S3D9.1|RL13_RHOSR RecName: Full=50S ribosomal protein L13 gi|110822663|gb|ABG97947.1| 50S ribosomal protein L13 [Rhodococcus jostii RHA1] Length=147 Score = 234 bits (597), Expect = 3e-60, Method: Compositional matrix adjust. Identities = 107/145 (74%), Positives = 130/145 (90%), Gaps = 0/145 (0%) Query 3 TYAPKAGDTTRSWYVIDATDVVLGRLAVAAANLLRGKHKPTFAPNVDGGDFVIVINADKV 62 TY PKAGD TR+W+VIDATDVVLGRLAV AANLLRGKHKPTFAP+VDGGDFV++INA+KV Sbjct 3 TYTPKAGDVTRTWHVIDATDVVLGRLAVQAANLLRGKHKPTFAPHVDGGDFVVIINAEKV 62 Query 63 AISGDKLQHKMVYRHSGYPGGLHKRTIGELMQRHPDRVVEKAILGMLPKNRLSRQIQRKL 122 AISG+K + K +Y HSG+PGGL R++GE++ ++PDR+VEKAI+GMLPKN+L R I KL Sbjct 63 AISGNKREGKFLYHHSGHPGGLKSRSVGEVLDKNPDRLVEKAIVGMLPKNKLGRAISSKL 122 Query 123 RVYAGPEHPHSAQQPVPYELKQVAQ 147 +VYAGP HPH+AQQPVP+E+KQVAQ Sbjct 123 KVYAGPNHPHAAQQPVPFEIKQVAQ 147 >gi|229489485|ref|ZP_04383348.1| ribosomal protein L13 [Rhodococcus erythropolis SK121] gi|229323582|gb|EEN89340.1| ribosomal protein L13 [Rhodococcus erythropolis SK121] Length=147 Score = 233 bits (595), Expect = 6e-60, Method: Compositional matrix adjust. Identities = 107/145 (74%), Positives = 128/145 (89%), Gaps = 0/145 (0%) Query 3 TYAPKAGDTTRSWYVIDATDVVLGRLAVAAANLLRGKHKPTFAPNVDGGDFVIVINADKV 62 TY PKAGD T +W+VIDATDVVLGRLAV AANLLRGKHKPT+AP++DGGDFV++INA+KV Sbjct 3 TYTPKAGDVTHTWHVIDATDVVLGRLAVQAANLLRGKHKPTYAPHIDGGDFVVIINAEKV 62 Query 63 AISGDKLQHKMVYRHSGYPGGLHKRTIGELMQRHPDRVVEKAILGMLPKNRLSRQIQRKL 122 AISG+KLQ K VY HSG+PGGL RT+GE++ R PDR+VEKAI+GMLPK +L R + KL Sbjct 63 AISGNKLQGKNVYHHSGFPGGLKSRTVGEVLDRTPDRLVEKAIVGMLPKTKLGRAMSSKL 122 Query 123 RVYAGPEHPHSAQQPVPYELKQVAQ 147 +VYAGP HPH+AQQPVP+E+KQVAQ Sbjct 123 KVYAGPNHPHTAQQPVPFEIKQVAQ 147 >gi|333921704|ref|YP_004495285.1| 50S ribosomal protein L13 [Amycolicicoccus subflavus DQS3-9A1] gi|333483925|gb|AEF42485.1| 50S ribosomal protein L13 [Amycolicicoccus subflavus DQS3-9A1] Length=147 Score = 231 bits (589), Expect = 3e-59, Method: Compositional matrix adjust. Identities = 103/147 (71%), Positives = 129/147 (88%), Gaps = 0/147 (0%) Query 1 VPTYAPKAGDTTRSWYVIDATDVVLGRLAVAAANLLRGKHKPTFAPNVDGGDFVIVINAD 60 + TY+PKAGD TR+WYVIDATDVVLGRLAV AA LLRGKHKPTFAPN DGGD+VI+INA+ Sbjct 1 MSTYSPKAGDVTRTWYVIDATDVVLGRLAVQAATLLRGKHKPTFAPNTDGGDYVIIINAE 60 Query 61 KVAISGDKLQHKMVYRHSGYPGGLHKRTIGELMQRHPDRVVEKAILGMLPKNRLSRQIQR 120 KVA+SG+K + KM+YRHSG+PGGL RT+GE + PDR+VE+A+ GM+P N+L R++++ Sbjct 61 KVAVSGNKREDKMIYRHSGFPGGLKSRTLGEALDTRPDRLVEQAVYGMIPHNKLGREVRK 120 Query 121 KLRVYAGPEHPHSAQQPVPYELKQVAQ 147 KL+VYAGP+HPH AQQPV +E+KQVAQ Sbjct 121 KLKVYAGPDHPHGAQQPVQFEIKQVAQ 147 >gi|54022833|ref|YP_117075.1| 50S ribosomal protein L13 [Nocardia farcinica IFM 10152] gi|81680278|sp|Q5Z1I0.1|RL13_NOCFA RecName: Full=50S ribosomal protein L13 gi|54014341|dbj|BAD55711.1| putative ribosomal protein L13 [Nocardia farcinica IFM 10152] Length=147 Score = 227 bits (579), Expect = 4e-58, Method: Compositional matrix adjust. Identities = 104/147 (71%), Positives = 130/147 (89%), Gaps = 0/147 (0%) Query 1 VPTYAPKAGDTTRSWYVIDATDVVLGRLAVAAANLLRGKHKPTFAPNVDGGDFVIVINAD 60 +PTY+PKAGD TR WYVIDATDVVLGRLAV AANLLRGK+KPT+AP+VDGGDFVI+INA+ Sbjct 1 MPTYSPKAGDVTRQWYVIDATDVVLGRLAVQAANLLRGKNKPTYAPHVDGGDFVIIINAE 60 Query 61 KVAISGDKLQHKMVYRHSGYPGGLHKRTIGELMQRHPDRVVEKAILGMLPKNRLSRQIQR 120 KVAISG+K Q K+++ HSG+PGGL RT+G++++ P+R+VEKA+ GM+PKN+L I Sbjct 61 KVAISGNKRQDKLIHHHSGHPGGLKSRTVGQVLETRPERLVEKAVKGMIPKNKLGNAIAG 120 Query 121 KLRVYAGPEHPHSAQQPVPYELKQVAQ 147 KL+VYAGP HPH+AQQPVP+E+KQVAQ Sbjct 121 KLKVYAGPNHPHAAQQPVPFEIKQVAQ 147 >gi|296138599|ref|YP_003645842.1| 50S ribosomal protein L13 [Tsukamurella paurometabola DSM 20162] gi|296026733|gb|ADG77503.1| ribosomal protein L13 [Tsukamurella paurometabola DSM 20162] Length=148 Score = 226 bits (576), Expect = 9e-58, Method: Compositional matrix adjust. Identities = 106/148 (72%), Positives = 129/148 (88%), Gaps = 1/148 (0%) Query 1 VPTYAPKAGDTTRSWYVIDATDVVLGRLAVAAANLLRGKHKPTFAPNVDGGDFVIVINAD 60 +PTY PKAGD TR W+VIDA+DVVLGRLAVAAANLLRGKHKPT+APNVD GD+VI+INA+ Sbjct 1 MPTYTPKAGDVTRQWHVIDASDVVLGRLAVAAANLLRGKHKPTYAPNVDSGDYVIIINAE 60 Query 61 KVAISGDKLQHKMVYRHSGYPGGLHKRTIGELM-QRHPDRVVEKAILGMLPKNRLSRQIQ 119 KVA+SG KL K YRHSG+PGGL R++GE++ ++P+RVV+KA+LGM+PKN+L I Sbjct 61 KVALSGAKLTDKRHYRHSGFPGGLSSRSVGEVLGSKNPERVVQKAVLGMIPKNKLGSAIG 120 Query 120 RKLRVYAGPEHPHSAQQPVPYELKQVAQ 147 KL+VYAGP HPH+AQQPVPYE+KQVAQ Sbjct 121 GKLKVYAGPNHPHTAQQPVPYEIKQVAQ 148 >gi|262201640|ref|YP_003272848.1| 50S ribosomal protein L13 [Gordonia bronchialis DSM 43247] gi|262084987|gb|ACY20955.1| ribosomal protein L13 [Gordonia bronchialis DSM 43247] Length=147 Score = 224 bits (571), Expect = 3e-57, Method: Compositional matrix adjust. Identities = 102/147 (70%), Positives = 125/147 (86%), Gaps = 0/147 (0%) Query 1 VPTYAPKAGDTTRSWYVIDATDVVLGRLAVAAANLLRGKHKPTFAPNVDGGDFVIVINAD 60 +PTY PKAGD TR+W+VIDATDVVLGRLAV +ANLLRGKHKPT+AP++DGGDFVI+INA+ Sbjct 1 MPTYTPKAGDITRTWHVIDATDVVLGRLAVQSANLLRGKHKPTYAPHMDGGDFVIIINAE 60 Query 61 KVAISGDKLQHKMVYRHSGYPGGLHKRTIGELMQRHPDRVVEKAILGMLPKNRLSRQIQR 120 KVA++ +K K+ Y HSG+PGGL RT EL++ HP+RVVEKAI GMLP N+L R + Sbjct 61 KVALTSNKADRKLNYTHSGHPGGLKSRTTAELLESHPERVVEKAIKGMLPSNKLGRAVAS 120 Query 121 KLRVYAGPEHPHSAQQPVPYELKQVAQ 147 KL+VYAGP HPH AQ+PVP+E+KQVAQ Sbjct 121 KLKVYAGPNHPHEAQRPVPFEIKQVAQ 147 >gi|331699125|ref|YP_004335364.1| 50S ribosomal protein L13 [Pseudonocardia dioxanivorans CB1190] gi|326953814|gb|AEA27511.1| ribosomal protein L13 [Pseudonocardia dioxanivorans CB1190] Length=147 Score = 222 bits (566), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 99/147 (68%), Positives = 128/147 (88%), Gaps = 0/147 (0%) Query 1 VPTYAPKAGDTTRSWYVIDATDVVLGRLAVAAANLLRGKHKPTFAPNVDGGDFVIVINAD 60 +PTY+PK G+ TR+W+VIDATDVVLGRLA AA LLRGKHKPT+AP++D GDFV+++NA+ Sbjct 1 MPTYSPKPGEITRAWHVIDATDVVLGRLATHAATLLRGKHKPTYAPHMDTGDFVVIVNAE 60 Query 61 KVAISGDKLQHKMVYRHSGYPGGLHKRTIGELMQRHPDRVVEKAILGMLPKNRLSRQIQR 120 K+A+SG+K K VYRHSGYPGGL +R++GE++++HPDR+VEKAI GMLPKNRL R + + Sbjct 61 KIAVSGNKRDDKFVYRHSGYPGGLRQRSVGEMIEKHPDRLVEKAIKGMLPKNRLGRAMAK 120 Query 121 KLRVYAGPEHPHSAQQPVPYELKQVAQ 147 KL+VYAGP HPHSAQ+P +E+ QVAQ Sbjct 121 KLKVYAGPTHPHSAQKPQAFEITQVAQ 147 >gi|343925125|ref|ZP_08764657.1| 50S ribosomal protein L13 [Gordonia alkanivorans NBRC 16433] gi|343765056|dbj|GAA11583.1| 50S ribosomal protein L13 [Gordonia alkanivorans NBRC 16433] Length=147 Score = 222 bits (566), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 100/147 (69%), Positives = 126/147 (86%), Gaps = 0/147 (0%) Query 1 VPTYAPKAGDTTRSWYVIDATDVVLGRLAVAAANLLRGKHKPTFAPNVDGGDFVIVINAD 60 +PTY PKAGD TR+W+VIDATDVVLGRLAV +ANLLRGKHKPT+AP++DGGDFVI+INA+ Sbjct 1 MPTYTPKAGDITRTWHVIDATDVVLGRLAVQSANLLRGKHKPTYAPHMDGGDFVIIINAE 60 Query 61 KVAISGDKLQHKMVYRHSGYPGGLHKRTIGELMQRHPDRVVEKAILGMLPKNRLSRQIQR 120 KVA++ +K + K+ Y HSG+PGGL RT EL++ P+RV+EKAI GMLP N+L R + Sbjct 61 KVALTSNKAERKLNYTHSGHPGGLQSRTTAELLETFPERVIEKAIKGMLPSNKLGRAMAS 120 Query 121 KLRVYAGPEHPHSAQQPVPYELKQVAQ 147 KL+VYAGP HPH+AQ+PVP+E+KQVAQ Sbjct 121 KLKVYAGPNHPHAAQRPVPFEIKQVAQ 147 >gi|326381863|ref|ZP_08203556.1| 50S ribosomal protein L13 [Gordonia neofelifaecis NRRL B-59395] gi|326199289|gb|EGD56470.1| 50S ribosomal protein L13 [Gordonia neofelifaecis NRRL B-59395] Length=147 Score = 221 bits (564), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 104/147 (71%), Positives = 125/147 (86%), Gaps = 0/147 (0%) Query 1 VPTYAPKAGDTTRSWYVIDATDVVLGRLAVAAANLLRGKHKPTFAPNVDGGDFVIVINAD 60 +PTY PKAGD T WYVIDATDVVLGRLAVA+ANLLRGK KPTFAP+VDGGD+VI+INA+ Sbjct 1 MPTYTPKAGDITHEWYVIDATDVVLGRLAVASANLLRGKGKPTFAPHVDGGDYVIIINAE 60 Query 61 KVAISGDKLQHKMVYRHSGYPGGLHKRTIGELMQRHPDRVVEKAILGMLPKNRLSRQIQR 120 KVA+SG+KL K +YRHSG+PGGL ++IGEL+ P+RVVE A+ GMLPKN+L I Sbjct 61 KVAVSGNKLTDKRLYRHSGHPGGLKSQSIGELLATKPERVVESAVKGMLPKNKLGNAIAG 120 Query 121 KLRVYAGPEHPHSAQQPVPYELKQVAQ 147 KL+VYAGP HPH+AQ+PV Y++KQVAQ Sbjct 121 KLKVYAGPNHPHTAQKPVNYDIKQVAQ 147 >gi|312140874|ref|YP_004008210.1| 50S ribosomal protein l13 rplm [Rhodococcus equi 103S] gi|325675488|ref|ZP_08155172.1| 50S ribosomal protein L13 [Rhodococcus equi ATCC 33707] gi|311890213|emb|CBH49531.1| 50S ribosomal protein L13 RplM [Rhodococcus equi 103S] gi|325553459|gb|EGD23137.1| 50S ribosomal protein L13 [Rhodococcus equi ATCC 33707] Length=137 Score = 218 bits (556), Expect = 2e-55, Method: Compositional matrix adjust. Identities = 100/136 (74%), Positives = 122/136 (90%), Gaps = 0/136 (0%) Query 12 TRSWYVIDATDVVLGRLAVAAANLLRGKHKPTFAPNVDGGDFVIVINADKVAISGDKLQH 71 TR+W+VIDATDVVLGRLAV AANLLRGKHKPTFAP+VDGGDFV++INADKVAISG+K Sbjct 2 TRTWHVIDATDVVLGRLAVQAANLLRGKHKPTFAPHVDGGDFVVIINADKVAISGNKRTD 61 Query 72 KMVYRHSGYPGGLHKRTIGELMQRHPDRVVEKAILGMLPKNRLSRQIQRKLRVYAGPEHP 131 K +Y HSG+PGGL R++GE+++++PDR+VEKA+ GMLPKN+L R I KL+VYAGP HP Sbjct 62 KFLYHHSGHPGGLKSRSVGEVLEKNPDRLVEKAVTGMLPKNKLGRAIAGKLKVYAGPTHP 121 Query 132 HSAQQPVPYELKQVAQ 147 H+AQQPVP+E+KQVAQ Sbjct 122 HAAQQPVPFEIKQVAQ 137 >gi|319948369|ref|ZP_08022511.1| 50S ribosomal protein L13 [Dietzia cinnamea P4] gi|319437967|gb|EFV92945.1| 50S ribosomal protein L13 [Dietzia cinnamea P4] Length=147 Score = 218 bits (555), Expect = 3e-55, Method: Compositional matrix adjust. Identities = 101/145 (70%), Positives = 119/145 (83%), Gaps = 0/145 (0%) Query 3 TYAPKAGDTTRSWYVIDATDVVLGRLAVAAANLLRGKHKPTFAPNVDGGDFVIVINADKV 62 TY PK GD TR+WYVIDATDVVLGRLAV AN+LRGKHKP FAPN D GDFVI+INADKV Sbjct 3 TYTPKPGDVTRAWYVIDATDVVLGRLAVQVANILRGKHKPQFAPNADTGDFVIIINADKV 62 Query 63 AISGDKLQHKMVYRHSGYPGGLHKRTIGELMQRHPDRVVEKAILGMLPKNRLSRQIQRKL 122 AIS +K + +RHSG+PGGL +T+G+ M PDRVVEKA+ GMLP N+L R + KL Sbjct 63 AISSNKRDRVVQHRHSGFPGGLKSQTLGKAMDTRPDRVVEKAVKGMLPSNKLGRAVASKL 122 Query 123 RVYAGPEHPHSAQQPVPYELKQVAQ 147 +VYAGP+HPH+AQQPVP+E+KQVAQ Sbjct 123 KVYAGPDHPHAAQQPVPFEIKQVAQ 147 >gi|325000965|ref|ZP_08122077.1| 50S ribosomal protein L13 [Pseudonocardia sp. P1] Length=147 Score = 214 bits (546), Expect = 2e-54, Method: Compositional matrix adjust. Identities = 95/147 (65%), Positives = 123/147 (84%), Gaps = 0/147 (0%) Query 1 VPTYAPKAGDTTRSWYVIDATDVVLGRLAVAAANLLRGKHKPTFAPNVDGGDFVIVINAD 60 +PTY+PK GD +W+VIDA DV LGRLA AA LLRGKHKPT+AP+VD GDFV+++NA+ Sbjct 1 MPTYSPKPGDINHAWHVIDADDVRLGRLATHAATLLRGKHKPTYAPHVDNGDFVVIVNAE 60 Query 61 KVAISGDKLQHKMVYRHSGYPGGLHKRTIGELMQRHPDRVVEKAILGMLPKNRLSRQIQR 120 K+++SG+K K VYRHSG+PGGL +R++GE++ HPDR+VEKAI GMLPKNRL R + + Sbjct 61 KISVSGNKRTDKFVYRHSGFPGGLSQRSVGEMIDSHPDRLVEKAIKGMLPKNRLGRAMAK 120 Query 121 KLRVYAGPEHPHSAQQPVPYELKQVAQ 147 KL+VYAGP HPH AQ+P P+E+KQV+Q Sbjct 121 KLKVYAGPSHPHEAQKPQPFEIKQVSQ 147 >gi|334336219|ref|YP_004541371.1| ribosomal protein L13 [Isoptericola variabilis 225] gi|334106587|gb|AEG43477.1| ribosomal protein L13 [Isoptericola variabilis 225] Length=149 Score = 214 bits (544), Expect = 5e-54, Method: Compositional matrix adjust. Identities = 100/145 (69%), Positives = 118/145 (82%), Gaps = 0/145 (0%) Query 3 TYAPKAGDTTRSWYVIDATDVVLGRLAVAAANLLRGKHKPTFAPNVDGGDFVIVINADKV 62 TY PK GD R WYV+DATDVVLGRLA A LLRGKHKPTFAP+VDGGDFVIVINADKV Sbjct 3 TYTPKPGDVQRDWYVVDATDVVLGRLASQVATLLRGKHKPTFAPHVDGGDFVIVINADKV 62 Query 63 AISGDKLQHKMVYRHSGYPGGLHKRTIGELMQRHPDRVVEKAILGMLPKNRLSRQIQRKL 122 A+SG+K + KM YRHSGYPGGL GEL++++P+R VEKA+ GMLPKN L+ Q +KL Sbjct 63 ALSGNKRETKMAYRHSGYPGGLRSVAYGELLEKNPERAVEKAVRGMLPKNSLAAQQLKKL 122 Query 123 RVYAGPEHPHSAQQPVPYELKQVAQ 147 +VY G EHPH+AQQP P+E+ QV+Q Sbjct 123 KVYRGAEHPHAAQQPKPFEITQVSQ 147 >gi|317507696|ref|ZP_07965403.1| ribosomal protein L13 [Segniliparus rugosus ATCC BAA-974] gi|316254023|gb|EFV13386.1| ribosomal protein L13 [Segniliparus rugosus ATCC BAA-974] Length=147 Score = 213 bits (542), Expect = 7e-54, Method: Compositional matrix adjust. Identities = 97/145 (67%), Positives = 121/145 (84%), Gaps = 0/145 (0%) Query 3 TYAPKAGDTTRSWYVIDATDVVLGRLAVAAANLLRGKHKPTFAPNVDGGDFVIVINADKV 62 TY+PKA + W+VIDATDVVLGRLAV AA LLRGKHKPTFAP++D GDFV+++NA KV Sbjct 3 TYSPKAAELNHQWHVIDATDVVLGRLAVTAATLLRGKHKPTFAPHLDNGDFVVIVNAGKV 62 Query 63 AISGDKLQHKMVYRHSGYPGGLHKRTIGELMQRHPDRVVEKAILGMLPKNRLSRQIQRKL 122 A++G+K K+V+RHSG+PGGL R IGEL+Q P RVVEKA+ GM+P+N+L R ++RKL Sbjct 63 ALTGNKRADKLVHRHSGHPGGLKSRAIGELLQSDPRRVVEKAVKGMIPRNKLGRAVERKL 122 Query 123 RVYAGPEHPHSAQQPVPYELKQVAQ 147 +VYAGPEHPH AQQPVPY + QV+Q Sbjct 123 KVYAGPEHPHQAQQPVPYTITQVSQ 147 >gi|296268587|ref|YP_003651219.1| 50S ribosomal protein L13 [Thermobispora bispora DSM 43833] gi|296091374|gb|ADG87326.1| ribosomal protein L13 [Thermobispora bispora DSM 43833] Length=147 Score = 212 bits (539), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 98/145 (68%), Positives = 119/145 (83%), Gaps = 0/145 (0%) Query 3 TYAPKAGDTTRSWYVIDATDVVLGRLAVAAANLLRGKHKPTFAPNVDGGDFVIVINADKV 62 T++PK+ D R W+VIDATDVVLGRLA A LLRGKHKP +AP+VD GDFVIV+NADKV Sbjct 3 TFSPKSSDVERRWWVIDATDVVLGRLASQVAILLRGKHKPIYAPHVDTGDFVIVVNADKV 62 Query 63 AISGDKLQHKMVYRHSGYPGGLHKRTIGELMQRHPDRVVEKAILGMLPKNRLSRQIQRKL 122 A++G+KL K YRHSGYPGGL T ELM++ PDRVVEKA+ GMLPKN L R++ +KL Sbjct 63 ALTGNKLTQKRAYRHSGYPGGLRSVTYEELMKKRPDRVVEKAVRGMLPKNSLGRKMAKKL 122 Query 123 RVYAGPEHPHSAQQPVPYELKQVAQ 147 +VYAGPEHPH AQ+PVPY++ Q+AQ Sbjct 123 KVYAGPEHPHQAQKPVPYQITQIAQ 147 >gi|184200292|ref|YP_001854499.1| 50S ribosomal protein L13 [Kocuria rhizophila DC2201] gi|226702871|sp|B2GJ23.1|RL13_KOCRD RecName: Full=50S ribosomal protein L13 gi|183580522|dbj|BAG28993.1| 50S ribosomal protein L13 [Kocuria rhizophila DC2201] Length=147 Score = 211 bits (537), Expect = 3e-53, Method: Compositional matrix adjust. Identities = 100/145 (69%), Positives = 114/145 (79%), Gaps = 0/145 (0%) Query 3 TYAPKAGDTTRSWYVIDATDVVLGRLAVAAANLLRGKHKPTFAPNVDGGDFVIVINADKV 62 TY PK GD R W+VIDATDVVLGRLA A LLRGKHKPTFAP+VD GDFVI+INA+KV Sbjct 3 TYTPKPGDVQRQWHVIDATDVVLGRLASQTATLLRGKHKPTFAPHVDTGDFVIIINAEKV 62 Query 63 AISGDKLQHKMVYRHSGYPGGLHKRTIGELMQRHPDRVVEKAILGMLPKNRLSRQIQRKL 122 A++G KLQ K YRHSGYPGGL + EL++++P R VEKAI GMLPKN+L+ Q KL Sbjct 63 ALTGSKLQKKRAYRHSGYPGGLKSTSYAELLEKNPTRAVEKAIKGMLPKNKLAAQQLSKL 122 Query 123 RVYAGPEHPHSAQQPVPYELKQVAQ 147 +VYAG EHPH AQQP PYE QVAQ Sbjct 123 KVYAGAEHPHQAQQPKPYEFTQVAQ 147 >gi|271962671|ref|YP_003336867.1| 50S ribosomal protein L13 [Streptosporangium roseum DSM 43021] gi|270505846|gb|ACZ84124.1| 50S ribosomal protein L13 [Streptosporangium roseum DSM 43021] Length=147 Score = 211 bits (536), Expect = 4e-53, Method: Compositional matrix adjust. Identities = 98/145 (68%), Positives = 117/145 (81%), Gaps = 0/145 (0%) Query 3 TYAPKAGDTTRSWYVIDATDVVLGRLAVAAANLLRGKHKPTFAPNVDGGDFVIVINADKV 62 TY PK + R W++IDATD+VLGRLA A LLRGKHKPTFA +VD GDFVI+INADKV Sbjct 3 TYTPKPAEVERQWHIIDATDIVLGRLASHVAILLRGKHKPTFANHVDTGDFVIIINADKV 62 Query 63 AISGDKLQHKMVYRHSGYPGGLHKRTIGELMQRHPDRVVEKAILGMLPKNRLSRQIQRKL 122 A++G+KL+ K YRHSGYPGGL T GELM++ PDR VEKA+ GMLPKN L R++ +KL Sbjct 63 ALTGNKLEQKKAYRHSGYPGGLRSVTYGELMEKRPDRAVEKAVKGMLPKNALGRKMIKKL 122 Query 123 RVYAGPEHPHSAQQPVPYELKQVAQ 147 +VYAG EHPH AQQPVP+EL Q+AQ Sbjct 123 KVYAGSEHPHQAQQPVPFELTQIAQ 147 >gi|257069453|ref|YP_003155708.1| 50S ribosomal protein L13P [Brachybacterium faecium DSM 4810] gi|256560271|gb|ACU86118.1| LSU ribosomal protein L13P [Brachybacterium faecium DSM 4810] Length=147 Score = 211 bits (536), Expect = 4e-53, Method: Compositional matrix adjust. Identities = 99/145 (69%), Positives = 118/145 (82%), Gaps = 0/145 (0%) Query 3 TYAPKAGDTTRSWYVIDATDVVLGRLAVAAANLLRGKHKPTFAPNVDGGDFVIVINADKV 62 T+ PK GD RSWYVIDATDVVLGRLA AA LLRGKHKP FAP+VD GDFVI+INADKV Sbjct 3 TFTPKPGDVERSWYVIDATDVVLGRLASQAAQLLRGKHKPVFAPHVDAGDFVIIINADKV 62 Query 63 AISGDKLQHKMVYRHSGYPGGLHKRTIGELMQRHPDRVVEKAILGMLPKNRLSRQIQRKL 122 A++G+K + K+ YRHSGYPGGL EL++++P+R VEKAI GMLPKN+L+ Q KL Sbjct 63 ALTGNKREAKLAYRHSGYPGGLRGTPYSELLEKNPERAVEKAIRGMLPKNKLADQQLNKL 122 Query 123 RVYAGPEHPHSAQQPVPYELKQVAQ 147 +VYAG EHPH+AQQPVP+ + QVAQ Sbjct 123 KVYAGAEHPHAAQQPVPFTIDQVAQ 147 >gi|296392777|ref|YP_003657661.1| 50S ribosomal protein L13 [Segniliparus rotundus DSM 44985] gi|296179924|gb|ADG96830.1| ribosomal protein L13 [Segniliparus rotundus DSM 44985] Length=152 Score = 209 bits (533), Expect = 9e-53, Method: Compositional matrix adjust. Identities = 95/145 (66%), Positives = 121/145 (84%), Gaps = 0/145 (0%) Query 3 TYAPKAGDTTRSWYVIDATDVVLGRLAVAAANLLRGKHKPTFAPNVDGGDFVIVINADKV 62 TY+PKA D W+VIDATDVVLGRLAV AA LLRGKHKPT+AP++D GDFV+++NA KV Sbjct 8 TYSPKAADLNHQWHVIDATDVVLGRLAVTAATLLRGKHKPTYAPHLDNGDFVVIVNAGKV 67 Query 63 AISGDKLQHKMVYRHSGYPGGLHKRTIGELMQRHPDRVVEKAILGMLPKNRLSRQIQRKL 122 A++G+K K+V+RHSG+PGGL R+IG+L+ P RVVEKA+ GM+P+N+L R ++RKL Sbjct 68 ALTGNKRADKLVHRHSGHPGGLKTRSIGQLLDSDPRRVVEKAVKGMIPRNKLGRAVERKL 127 Query 123 RVYAGPEHPHSAQQPVPYELKQVAQ 147 +VYAGPEHPH AQQPVPY + QV+Q Sbjct 128 KVYAGPEHPHQAQQPVPYAITQVSQ 152 >gi|257054515|ref|YP_003132347.1| 50S ribosomal protein L13 [Saccharomonospora viridis DSM 43017] gi|256584387|gb|ACU95520.1| LSU ribosomal protein L13P [Saccharomonospora viridis DSM 43017] Length=150 Score = 209 bits (532), Expect = 1e-52, Method: Compositional matrix adjust. Identities = 93/147 (64%), Positives = 123/147 (84%), Gaps = 0/147 (0%) Query 1 VPTYAPKAGDTTRSWYVIDATDVVLGRLAVAAANLLRGKHKPTFAPNVDGGDFVIVINAD 60 +PTY+PK GD TR+W+VIDA +VVLGRLA A LLRGKHKP +AP+VD GDFVI++NAD Sbjct 1 MPTYSPKPGDVTRAWHVIDAENVVLGRLATEVATLLRGKHKPIYAPHVDTGDFVIIVNAD 60 Query 61 KVAISGDKLQHKMVYRHSGYPGGLHKRTIGELMQRHPDRVVEKAILGMLPKNRLSRQIQR 120 KVA++G+K + K+ YRHSGYPGGL KR+ GEL++ P+R+VEK + GMLPKN+L R + Sbjct 61 KVALTGNKREQKLAYRHSGYPGGLRKRSYGELLETRPERLVEKVVKGMLPKNKLGRAQAK 120 Query 121 KLRVYAGPEHPHSAQQPVPYELKQVAQ 147 KL+VYAGP+HPH+AQ+P P+E+ ++AQ Sbjct 121 KLKVYAGPDHPHAAQKPQPHEITKIAQ 147 >gi|297201766|ref|ZP_06919163.1| ribosomal protein L13 [Streptomyces sviceus ATCC 29083] gi|297147949|gb|EDY54894.2| ribosomal protein L13 [Streptomyces sviceus ATCC 29083] Length=160 Score = 209 bits (532), Expect = 1e-52, Method: Compositional matrix adjust. Identities = 98/147 (67%), Positives = 119/147 (81%), Gaps = 0/147 (0%) Query 1 VPTYAPKAGDTTRSWYVIDATDVVLGRLAVAAANLLRGKHKPTFAPNVDGGDFVIVINAD 60 V TY+PK GD TR W+VIDA DVVLGRLA AANLLRGKHKPT+AP++D GDFVI+INAD Sbjct 14 VRTYSPKPGDVTRQWHVIDAQDVVLGRLATTAANLLRGKHKPTYAPHMDMGDFVIIINAD 73 Query 61 KVAISGDKLQHKMVYRHSGYPGGLHKRTIGELMQRHPDRVVEKAILGMLPKNRLSRQIQR 120 KV +SG+K KM YRHSGYPGGL EL+ ++P++ VEKAI GM+PKN L RQ+ Sbjct 74 KVHLSGNKRTQKMAYRHSGYPGGLRSVRYDELLDKNPEKAVEKAIKGMIPKNSLGRQMLS 133 Query 121 KLRVYAGPEHPHSAQQPVPYELKQVAQ 147 KL+VY+G +HPH+AQQPVP+E+ QVAQ Sbjct 134 KLKVYSGDQHPHAAQQPVPFEITQVAQ 160 >gi|256380550|ref|YP_003104210.1| 50S ribosomal protein L13 [Actinosynnema mirum DSM 43827] gi|255924853|gb|ACU40364.1| ribosomal protein L13 [Actinosynnema mirum DSM 43827] Length=147 Score = 208 bits (529), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 97/145 (67%), Positives = 118/145 (82%), Gaps = 0/145 (0%) Query 3 TYAPKAGDTTRSWYVIDATDVVLGRLAVAAANLLRGKHKPTFAPNVDGGDFVIVINADKV 62 TY+PK G+ TR+W+VIDA D+VLGRLA AA LLRGKHKPT+AP+VD GDFVIVINADKV Sbjct 3 TYSPKPGEVTRAWHVIDAQDLVLGRLATQAATLLRGKHKPTYAPHVDTGDFVIVINADKV 62 Query 63 AISGDKLQHKMVYRHSGYPGGLHKRTIGELMQRHPDRVVEKAILGMLPKNRLSRQIQRKL 122 A++G K + YRHSG+PGGL K++ GEL+ DR+VEKAI GMLPKNRL R + KL Sbjct 63 ALTGKKREQAFAYRHSGHPGGLSKQSFGELLDTRADRLVEKAIKGMLPKNRLGRAMASKL 122 Query 123 RVYAGPEHPHSAQQPVPYELKQVAQ 147 +VY G EHPH+AQQP P+E+K+VAQ Sbjct 123 KVYTGSEHPHAAQQPQPFEIKKVAQ 147 >gi|332669556|ref|YP_004452564.1| 50S ribosomal protein L13 [Cellulomonas fimi ATCC 484] gi|332338594|gb|AEE45177.1| ribosomal protein L13 [Cellulomonas fimi ATCC 484] Length=149 Score = 208 bits (529), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 97/145 (67%), Positives = 117/145 (81%), Gaps = 0/145 (0%) Query 3 TYAPKAGDTTRSWYVIDATDVVLGRLAVAAANLLRGKHKPTFAPNVDGGDFVIVINADKV 62 TY PK GD R+WYVIDATDVVLGRLA A LLRGKHK TFAP+VDGGDFVIVINADKV Sbjct 3 TYTPKPGDVERTWYVIDATDVVLGRLATHVATLLRGKHKATFAPHVDGGDFVIVINADKV 62 Query 63 AISGDKLQHKMVYRHSGYPGGLHKRTIGELMQRHPDRVVEKAILGMLPKNRLSRQIQRKL 122 A++G+K + K+ YRHSGYPGGL EL+++HP+R +EKA+ GMLPK+ L+ + KL Sbjct 63 ALTGNKRETKLAYRHSGYPGGLRATRYSELLEKHPERAIEKAVRGMLPKSSLAAKQLGKL 122 Query 123 RVYAGPEHPHSAQQPVPYELKQVAQ 147 +VYAG EHPH+AQQP P+E+ QVAQ Sbjct 123 KVYAGAEHPHAAQQPKPFEITQVAQ 147 >gi|302524041|ref|ZP_07276383.1| ribosomal protein L13 [Streptomyces sp. AA4] gi|302432936|gb|EFL04752.1| ribosomal protein L13 [Streptomyces sp. AA4] Length=150 Score = 208 bits (529), Expect = 3e-52, Method: Compositional matrix adjust. Identities = 93/147 (64%), Positives = 120/147 (82%), Gaps = 0/147 (0%) Query 1 VPTYAPKAGDTTRSWYVIDATDVVLGRLAVAAANLLRGKHKPTFAPNVDGGDFVIVINAD 60 +PTY+PK GD TR+W+VIDA DVVLGRLA A LLRGKHKPT+AP+VD GDFVI++NA+ Sbjct 1 MPTYSPKPGDVTRAWHVIDAEDVVLGRLATEVATLLRGKHKPTYAPHVDTGDFVIIVNAE 60 Query 61 KVAISGDKLQHKMVYRHSGYPGGLHKRTIGELMQRHPDRVVEKAILGMLPKNRLSRQIQR 120 KVA++G+K + K YRHSGYPGGL KR+ GEL+ P+ +VEK + GMLPKN+L R + + Sbjct 61 KVALTGNKREQKFAYRHSGYPGGLRKRSFGELLDTKPEHLVEKVVKGMLPKNKLGRAMAK 120 Query 121 KLRVYAGPEHPHSAQQPVPYELKQVAQ 147 KL+VYAGP+HPH+AQQP E+ ++AQ Sbjct 121 KLKVYAGPQHPHAAQQPQAREITKIAQ 147 >gi|254391360|ref|ZP_05006563.1| 50S ribosomal protein L13 [Streptomyces clavuligerus ATCC 27064] gi|294814499|ref|ZP_06773142.1| 50S ribosomal protein L13 [Streptomyces clavuligerus ATCC 27064] gi|326442888|ref|ZP_08217622.1| 50S ribosomal protein L13 [Streptomyces clavuligerus ATCC 27064] gi|197705050|gb|EDY50862.1| 50S ribosomal protein L13 [Streptomyces clavuligerus ATCC 27064] gi|294327098|gb|EFG08741.1| 50S ribosomal protein L13 [Streptomyces clavuligerus ATCC 27064] Length=147 Score = 208 bits (529), Expect = 3e-52, Method: Compositional matrix adjust. Identities = 98/145 (68%), Positives = 115/145 (80%), Gaps = 0/145 (0%) Query 3 TYAPKAGDTTRSWYVIDATDVVLGRLAVAAANLLRGKHKPTFAPNVDGGDFVIVINADKV 62 TY+PK GD TR W+VIDA DVVLGRLA AA LLRGKHKP +AP+VD GDFVI+INADKV Sbjct 3 TYSPKPGDVTRQWHVIDAQDVVLGRLATTAATLLRGKHKPIYAPHVDAGDFVIIINADKV 62 Query 63 AISGDKLQHKMVYRHSGYPGGLHKRTIGELMQRHPDRVVEKAILGMLPKNRLSRQIQRKL 122 +SG+K KM YRHSGYPGGL ELM ++P++ VEKA+ GMLPKN L RQ+ KL Sbjct 63 HLSGNKRTQKMAYRHSGYPGGLRSVRYDELMDKNPEKAVEKAVKGMLPKNSLGRQMLSKL 122 Query 123 RVYAGPEHPHSAQQPVPYELKQVAQ 147 +VYAG HPH+AQQPVP+E+ QVAQ Sbjct 123 KVYAGENHPHAAQQPVPFEITQVAQ 147 >gi|269955469|ref|YP_003325258.1| 50S ribosomal protein L13 [Xylanimonas cellulosilytica DSM 15894] gi|269304150|gb|ACZ29700.1| ribosomal protein L13 [Xylanimonas cellulosilytica DSM 15894] Length=149 Score = 207 bits (528), Expect = 3e-52, Method: Compositional matrix adjust. Identities = 99/145 (69%), Positives = 115/145 (80%), Gaps = 0/145 (0%) Query 3 TYAPKAGDTTRSWYVIDATDVVLGRLAVAAANLLRGKHKPTFAPNVDGGDFVIVINADKV 62 TY PK GD R WYVIDATDVVLGRLA A LLRGKHKPTFAP+VDGGDFVIVINADKV Sbjct 3 TYTPKPGDVQRDWYVIDATDVVLGRLATHVATLLRGKHKPTFAPHVDGGDFVIVINADKV 62 Query 63 AISGDKLQHKMVYRHSGYPGGLHKRTIGELMQRHPDRVVEKAILGMLPKNRLSRQIQRKL 122 A+SG+K K+ YRHSGYPGGL GEL++++P+R VEKA+ GM+PK L RQ KL Sbjct 63 ALSGNKRATKLAYRHSGYPGGLRSVAYGELLEKNPERAVEKAVRGMIPKTSLGRQQLGKL 122 Query 123 RVYAGPEHPHSAQQPVPYELKQVAQ 147 +VY G EHPH+AQQP P+E+ QV+Q Sbjct 123 KVYRGGEHPHAAQQPQPFEITQVSQ 147 Lambda K H 0.319 0.136 0.408 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 131150363096 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40