BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv3445c
Length=105
Score E
Sequences producing significant alignments: (Bits) Value
gi|323717929|gb|EGB27118.1| esat-6 like protein esxU [Mycobacter... 214 3e-54
gi|298526930|ref|ZP_07014339.1| conserved hypothetical protein [... 214 5e-54
gi|15843040|ref|NP_338077.1| hypothetical protein MT3550 [Mycoba... 213 6e-54
gi|15610581|ref|NP_217962.1| ESAT-6 like protein ESXU [Mycobacte... 213 7e-54
gi|254234041|ref|ZP_04927366.1| Esat-6 like protein esxU [Mycoba... 212 2e-53
gi|289759608|ref|ZP_06518986.1| conserved hypothetical protein [... 211 4e-53
gi|339296269|gb|AEJ48380.1| esat-6 like protein esxU [Mycobacter... 209 1e-52
gi|240167796|ref|ZP_04746455.1| hypothetical protein MkanA1_0067... 182 2e-44
gi|254776818|ref|ZP_05218334.1| hypothetical protein MaviaA2_194... 177 4e-43
gi|336460694|gb|EGO39584.1| WXG100 family type VII secretion tar... 176 1e-42
gi|41410341|ref|NP_963177.1| hypothetical protein MAP4243 [Mycob... 175 2e-42
gi|254821783|ref|ZP_05226784.1| hypothetical protein MintA_17757... 169 1e-40
gi|118465412|ref|YP_883523.1| hypothetical protein MAV_4388 [Myc... 168 2e-40
gi|183981124|ref|YP_001849415.1| EsaT-6 like protein, EsxU [Myco... 162 2e-38
gi|118616637|ref|YP_904969.1| EsaT-6 like protein, EsxU [Mycobac... 157 5e-37
gi|296165843|ref|ZP_06848333.1| Esat-6 like protein esxU [Mycoba... 154 5e-36
gi|342861880|ref|ZP_08718525.1| hypothetical protein MCOL_23440 ... 149 2e-34
gi|120402473|ref|YP_952302.1| hypothetical protein Mvan_1464 [My... 131 3e-29
gi|118471975|ref|YP_885920.1| hypothetical protein MSMEG_1538 [M... 129 2e-28
gi|145225533|ref|YP_001136211.1| hypothetical protein Mflv_4957 ... 127 8e-28
gi|126433758|ref|YP_001069449.1| hypothetical protein Mjls_1155 ... 126 9e-28
gi|108798100|ref|YP_638297.1| hypothetical protein Mmcs_1128 [My... 124 3e-27
gi|333991911|ref|YP_004524525.1| hypothetical protein JDM601_327... 103 6e-21
gi|237786316|ref|YP_002907021.1| hypothetical protein ckrop_1757... 54.3 6e-06
gi|213965007|ref|ZP_03393206.1| conserved hypothetical protein [... 52.8 2e-05
gi|145294749|ref|YP_001137570.1| hypothetical protein cgR_0697 [... 51.6 4e-05
gi|305680103|ref|ZP_07402913.1| WXG100 family type VII secretion... 50.8 6e-05
gi|337290069|ref|YP_004629090.1| hypothetical protein CULC22_004... 50.1 1e-04
gi|319948908|ref|ZP_08023018.1| hypothetical protein ES5_05942 [... 50.1 1e-04
gi|227505257|ref|ZP_03935306.1| conserved hypothetical protein [... 48.9 3e-04
gi|19551813|ref|NP_599815.1| hypothetical protein NCgl0554 [Cory... 48.9 3e-04
gi|38233167|ref|NP_938934.1| CFP-10-like protein [Corynebacteriu... 48.1 4e-04
gi|255324787|ref|ZP_05365901.1| conserved hypothetical protein [... 47.4 6e-04
gi|311740022|ref|ZP_07713856.1| conserved hypothetical protein [... 47.4 8e-04
gi|227832281|ref|YP_002833988.1| hypothetical protein cauri_0453... 47.4 8e-04
gi|300857818|ref|YP_003782801.1| hypothetical protein cpfrc_0040... 47.0 8e-04
gi|25027138|ref|NP_737192.1| hypothetical protein CE0582 [Coryne... 47.0 0.001
gi|333921706|ref|YP_004495287.1| hypothetical protein AS9A_4053 ... 47.0 0.001
gi|227502707|ref|ZP_03932756.1| conserved hypothetical protein [... 46.2 0.002
gi|334563184|ref|ZP_08516175.1| hypothetical protein CbovD2_0130... 45.1 0.003
gi|340795258|ref|YP_004760721.1| hypothetical protein CVAR_2303 ... 44.7 0.004
gi|225020499|ref|ZP_03709691.1| hypothetical protein CORMATOL_00... 44.7 0.005
gi|302205554|gb|ADL09896.1| WXG domain-containing protein [Coryn... 44.3 0.006
gi|172040053|ref|YP_001799767.1| hypothetical protein cur_0373 [... 43.9 0.008
gi|336326387|ref|YP_004606353.1| hypothetical protein CRES_1836 ... 42.7 0.017
gi|229821685|ref|YP_002883211.1| hypothetical protein Bcav_3205 ... 40.4 0.086
gi|312140877|ref|YP_004008213.1| esx cluster cfp-10 protein [Rho... 39.7 0.16
gi|300779783|ref|ZP_07089639.1| CFP-10 family protein [Corynebac... 39.3 0.21
gi|68536838|ref|YP_251543.1| hypothetical protein jk1748 [Coryne... 39.3 0.22
gi|256390224|ref|YP_003111788.1| hypothetical protein Caci_1019 ... 38.9 0.24
>gi|323717929|gb|EGB27118.1| esat-6 like protein esxU [Mycobacterium tuberculosis CDC1551A]
Length=143
Score = 214 bits (545), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 105/105 (100%), Positives = 105/105 (100%), Gaps = 0/105 (0%)
Query 1 VSTPNTLNADFDLMRSVAGITDARNEEIRAMLQAFIGRMSGVPPSVWGGLAAARFQDVVD 60
VSTPNTLNADFDLMRSVAGITDARNEEIRAMLQAFIGRMSGVPPSVWGGLAAARFQDVVD
Sbjct 39 VSTPNTLNADFDLMRSVAGITDARNEEIRAMLQAFIGRMSGVPPSVWGGLAAARFQDVVD 98
Query 61 RWNAESTRLYHVLHAIADTIRHNEAALREAGQIHARHIAAAGGDL 105
RWNAESTRLYHVLHAIADTIRHNEAALREAGQIHARHIAAAGGDL
Sbjct 99 RWNAESTRLYHVLHAIADTIRHNEAALREAGQIHARHIAAAGGDL 143
>gi|298526930|ref|ZP_07014339.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A]
gi|298496724|gb|EFI32018.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A]
Length=112
Score = 214 bits (544), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 105/105 (100%), Positives = 105/105 (100%), Gaps = 0/105 (0%)
Query 1 VSTPNTLNADFDLMRSVAGITDARNEEIRAMLQAFIGRMSGVPPSVWGGLAAARFQDVVD 60
VSTPNTLNADFDLMRSVAGITDARNEEIRAMLQAFIGRMSGVPPSVWGGLAAARFQDVVD
Sbjct 8 VSTPNTLNADFDLMRSVAGITDARNEEIRAMLQAFIGRMSGVPPSVWGGLAAARFQDVVD 67
Query 61 RWNAESTRLYHVLHAIADTIRHNEAALREAGQIHARHIAAAGGDL 105
RWNAESTRLYHVLHAIADTIRHNEAALREAGQIHARHIAAAGGDL
Sbjct 68 RWNAESTRLYHVLHAIADTIRHNEAALREAGQIHARHIAAAGGDL 112
>gi|15843040|ref|NP_338077.1| hypothetical protein MT3550 [Mycobacterium tuberculosis CDC1551]
gi|13883383|gb|AAK47891.1| hypothetical protein MT3550 [Mycobacterium tuberculosis CDC1551]
Length=135
Score = 213 bits (543), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 105/105 (100%), Positives = 105/105 (100%), Gaps = 0/105 (0%)
Query 1 VSTPNTLNADFDLMRSVAGITDARNEEIRAMLQAFIGRMSGVPPSVWGGLAAARFQDVVD 60
VSTPNTLNADFDLMRSVAGITDARNEEIRAMLQAFIGRMSGVPPSVWGGLAAARFQDVVD
Sbjct 31 VSTPNTLNADFDLMRSVAGITDARNEEIRAMLQAFIGRMSGVPPSVWGGLAAARFQDVVD 90
Query 61 RWNAESTRLYHVLHAIADTIRHNEAALREAGQIHARHIAAAGGDL 105
RWNAESTRLYHVLHAIADTIRHNEAALREAGQIHARHIAAAGGDL
Sbjct 91 RWNAESTRLYHVLHAIADTIRHNEAALREAGQIHARHIAAAGGDL 135
>gi|15610581|ref|NP_217962.1| ESAT-6 like protein ESXU [Mycobacterium tuberculosis H37Rv]
gi|31794622|ref|NP_857115.1| hypothetical protein Mb3475c [Mycobacterium bovis AF2122/97]
gi|121639366|ref|YP_979590.1| hypothetical protein BCG_3511c [Mycobacterium bovis BCG str.
Pasteur 1173P2]
44 more sequence titles
Length=125
Score = 213 bits (543), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 105/105 (100%), Positives = 105/105 (100%), Gaps = 0/105 (0%)
Query 1 VSTPNTLNADFDLMRSVAGITDARNEEIRAMLQAFIGRMSGVPPSVWGGLAAARFQDVVD 60
VSTPNTLNADFDLMRSVAGITDARNEEIRAMLQAFIGRMSGVPPSVWGGLAAARFQDVVD
Sbjct 21 VSTPNTLNADFDLMRSVAGITDARNEEIRAMLQAFIGRMSGVPPSVWGGLAAARFQDVVD 80
Query 61 RWNAESTRLYHVLHAIADTIRHNEAALREAGQIHARHIAAAGGDL 105
RWNAESTRLYHVLHAIADTIRHNEAALREAGQIHARHIAAAGGDL
Sbjct 81 RWNAESTRLYHVLHAIADTIRHNEAALREAGQIHARHIAAAGGDL 125
>gi|254234041|ref|ZP_04927366.1| Esat-6 like protein esxU [Mycobacterium tuberculosis C]
gi|308232467|ref|ZP_07416129.2| esat-6 like protein esxU [Mycobacterium tuberculosis SUMu001]
gi|308370266|ref|ZP_07420848.2| esat-6 like protein esxU [Mycobacterium tuberculosis SUMu002]
23 more sequence titles
Length=105
Score = 212 bits (539), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 104/105 (99%), Positives = 105/105 (100%), Gaps = 0/105 (0%)
Query 1 VSTPNTLNADFDLMRSVAGITDARNEEIRAMLQAFIGRMSGVPPSVWGGLAAARFQDVVD 60
+STPNTLNADFDLMRSVAGITDARNEEIRAMLQAFIGRMSGVPPSVWGGLAAARFQDVVD
Sbjct 1 MSTPNTLNADFDLMRSVAGITDARNEEIRAMLQAFIGRMSGVPPSVWGGLAAARFQDVVD 60
Query 61 RWNAESTRLYHVLHAIADTIRHNEAALREAGQIHARHIAAAGGDL 105
RWNAESTRLYHVLHAIADTIRHNEAALREAGQIHARHIAAAGGDL
Sbjct 61 RWNAESTRLYHVLHAIADTIRHNEAALREAGQIHARHIAAAGGDL 105
>gi|289759608|ref|ZP_06518986.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
gi|294995774|ref|ZP_06801465.1| hypothetical protein Mtub2_15028 [Mycobacterium tuberculosis
210]
gi|289715172|gb|EFD79184.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
gi|326905292|gb|EGE52225.1| esat-6 like protein esxU [Mycobacterium tuberculosis W-148]
Length=125
Score = 211 bits (536), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 104/105 (99%), Positives = 104/105 (99%), Gaps = 0/105 (0%)
Query 1 VSTPNTLNADFDLMRSVAGITDARNEEIRAMLQAFIGRMSGVPPSVWGGLAAARFQDVVD 60
VSTPNTLNADFDLMRSVAGITDARNEEIRAMLQAFIGRMSGV PSVWGGLAAARFQDVVD
Sbjct 21 VSTPNTLNADFDLMRSVAGITDARNEEIRAMLQAFIGRMSGVSPSVWGGLAAARFQDVVD 80
Query 61 RWNAESTRLYHVLHAIADTIRHNEAALREAGQIHARHIAAAGGDL 105
RWNAESTRLYHVLHAIADTIRHNEAALREAGQIHARHIAAAGGDL
Sbjct 81 RWNAESTRLYHVLHAIADTIRHNEAALREAGQIHARHIAAAGGDL 125
>gi|339296269|gb|AEJ48380.1| esat-6 like protein esxU [Mycobacterium tuberculosis CCDC5079]
gi|339299871|gb|AEJ51981.1| esat-6 like protein esxU [Mycobacterium tuberculosis CCDC5180]
Length=105
Score = 209 bits (532), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 103/105 (99%), Positives = 104/105 (99%), Gaps = 0/105 (0%)
Query 1 VSTPNTLNADFDLMRSVAGITDARNEEIRAMLQAFIGRMSGVPPSVWGGLAAARFQDVVD 60
+STPNTLNADFDLMRSVAGITDARNEEIRAMLQAFIGRMSGV PSVWGGLAAARFQDVVD
Sbjct 1 MSTPNTLNADFDLMRSVAGITDARNEEIRAMLQAFIGRMSGVSPSVWGGLAAARFQDVVD 60
Query 61 RWNAESTRLYHVLHAIADTIRHNEAALREAGQIHARHIAAAGGDL 105
RWNAESTRLYHVLHAIADTIRHNEAALREAGQIHARHIAAAGGDL
Sbjct 61 RWNAESTRLYHVLHAIADTIRHNEAALREAGQIHARHIAAAGGDL 105
>gi|240167796|ref|ZP_04746455.1| hypothetical protein MkanA1_00670 [Mycobacterium kansasii ATCC
12478]
Length=105
Score = 182 bits (461), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 87/103 (85%), Positives = 95/103 (93%), Gaps = 0/103 (0%)
Query 3 TPNTLNADFDLMRSVAGITDARNEEIRAMLQAFIGRMSGVPPSVWGGLAAARFQDVVDRW 62
+PN LNADFDLMRSVA TDARNEEIRAMLQAFIGRMS VPPS+WGG+AAARF+ VVDRW
Sbjct 3 SPNALNADFDLMRSVAATTDARNEEIRAMLQAFIGRMSSVPPSIWGGMAAARFKGVVDRW 62
Query 63 NAESTRLYHVLHAIADTIRHNEAALREAGQIHARHIAAAGGDL 105
+AESTRLYHVLHAIA+TIRHNEA LR+AGQ HA HIAAAGG+L
Sbjct 63 HAESTRLYHVLHAIAETIRHNEAVLRDAGQSHALHIAAAGGEL 105
>gi|254776818|ref|ZP_05218334.1| hypothetical protein MaviaA2_19426 [Mycobacterium avium subsp.
avium ATCC 25291]
Length=105
Score = 177 bits (449), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 84/105 (80%), Positives = 95/105 (91%), Gaps = 0/105 (0%)
Query 1 VSTPNTLNADFDLMRSVAGITDARNEEIRAMLQAFIGRMSGVPPSVWGGLAAARFQDVVD 60
++T NT++ DFDLMRSVAG TDARNEEIRAMLQAFIGRMSGVPP+ WGGLAAARF++V+D
Sbjct 1 MATSNTVSTDFDLMRSVAGTTDARNEEIRAMLQAFIGRMSGVPPAAWGGLAAARFKEVID 60
Query 61 RWNAESTRLYHVLHAIADTIRHNEAALREAGQIHARHIAAAGGDL 105
RWNAES RLYH LHAIA+TIRHN A L+EAGQ HA HIAAAGG+L
Sbjct 61 RWNAESVRLYHALHAIAETIRHNAATLQEAGQNHADHIAAAGGNL 105
>gi|336460694|gb|EGO39584.1| WXG100 family type VII secretion target [Mycobacterium avium
subsp. paratuberculosis S397]
Length=122
Score = 176 bits (445), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 83/105 (80%), Positives = 94/105 (90%), Gaps = 0/105 (0%)
Query 1 VSTPNTLNADFDLMRSVAGITDARNEEIRAMLQAFIGRMSGVPPSVWGGLAAARFQDVVD 60
++T NT++ DFDLMRSVAG TDARNEEIRAMLQAFIGRMSGVPP+ WGGLAAARF++++D
Sbjct 18 MATSNTVSTDFDLMRSVAGTTDARNEEIRAMLQAFIGRMSGVPPAAWGGLAAARFKEMID 77
Query 61 RWNAESTRLYHVLHAIADTIRHNEAALREAGQIHARHIAAAGGDL 105
RWNAES RLYH LHAIADTIRHN A L++AGQ HA HIAAAGG L
Sbjct 78 RWNAESVRLYHALHAIADTIRHNAATLQDAGQNHADHIAAAGGSL 122
>gi|41410341|ref|NP_963177.1| hypothetical protein MAP4243 [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|41399175|gb|AAS06793.1| hypothetical protein MAP_4243 [Mycobacterium avium subsp. paratuberculosis
K-10]
Length=105
Score = 175 bits (444), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 83/105 (80%), Positives = 94/105 (90%), Gaps = 0/105 (0%)
Query 1 VSTPNTLNADFDLMRSVAGITDARNEEIRAMLQAFIGRMSGVPPSVWGGLAAARFQDVVD 60
++T NT++ DFDLMRSVAG TDARNEEIRAMLQAFIGRMSGVPP+ WGGLAAARF++++D
Sbjct 1 MATSNTVSTDFDLMRSVAGTTDARNEEIRAMLQAFIGRMSGVPPAAWGGLAAARFKEMID 60
Query 61 RWNAESTRLYHVLHAIADTIRHNEAALREAGQIHARHIAAAGGDL 105
RWNAES RLYH LHAIADTIRHN A L++AGQ HA HIAAAGG L
Sbjct 61 RWNAESVRLYHALHAIADTIRHNAATLQDAGQNHADHIAAAGGSL 105
>gi|254821783|ref|ZP_05226784.1| hypothetical protein MintA_17757 [Mycobacterium intracellulare
ATCC 13950]
Length=105
Score = 169 bits (428), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 82/105 (79%), Positives = 89/105 (85%), Gaps = 0/105 (0%)
Query 1 VSTPNTLNADFDLMRSVAGITDARNEEIRAMLQAFIGRMSGVPPSVWGGLAAARFQDVVD 60
++ PN L+AD DLMRSVAG TDARNEEIRAMLQAFIGRM GVPPS WGG AA RF+DV+D
Sbjct 1 MAAPNPLSADVDLMRSVAGTTDARNEEIRAMLQAFIGRMGGVPPSAWGGPAATRFKDVID 60
Query 61 RWNAESTRLYHVLHAIADTIRHNEAALREAGQIHARHIAAAGGDL 105
RWNAES RLYH LHAIADTIR N A L+EAGQ HA IAAAGG+L
Sbjct 61 RWNAESVRLYHALHAIADTIRQNAATLQEAGQSHADRIAAAGGNL 105
>gi|118465412|ref|YP_883523.1| hypothetical protein MAV_4388 [Mycobacterium avium 104]
gi|118166699|gb|ABK67596.1| conserved hypothetical protein [Mycobacterium avium 104]
Length=99
Score = 168 bits (426), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 80/99 (81%), Positives = 88/99 (89%), Gaps = 0/99 (0%)
Query 7 LNADFDLMRSVAGITDARNEEIRAMLQAFIGRMSGVPPSVWGGLAAARFQDVVDRWNAES 66
++ DFDLMRSVAG TDARNEEIRAMLQAFIGRMSGVPP+ WGGLAAARF++V+DRWNAES
Sbjct 1 MSTDFDLMRSVAGTTDARNEEIRAMLQAFIGRMSGVPPAAWGGLAAARFKEVIDRWNAES 60
Query 67 TRLYHVLHAIADTIRHNEAALREAGQIHARHIAAAGGDL 105
RLYH LHAIA+TIRHN L+EAGQ HA HIAAAGG L
Sbjct 61 VRLYHALHAIAETIRHNAGTLQEAGQNHADHIAAAGGSL 99
>gi|183981124|ref|YP_001849415.1| EsaT-6 like protein, EsxU [Mycobacterium marinum M]
gi|183174450|gb|ACC39560.1| EsaT-6 like protein, EsxU [Mycobacterium marinum M]
Length=117
Score = 162 bits (409), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 78/104 (75%), Positives = 87/104 (84%), Gaps = 0/104 (0%)
Query 2 STPNTLNADFDLMRSVAGITDARNEEIRAMLQAFIGRMSGVPPSVWGGLAAARFQDVVDR 61
+ NTL+ADFDLMR+VA TDARNEEIRA+LQAFIGRM+ VP SVWGG+AA RF+ +DR
Sbjct 14 TASNTLSADFDLMRTVAATTDARNEEIRALLQAFIGRMNDVPASVWGGVAAVRFKHAMDR 73
Query 62 WNAESTRLYHVLHAIADTIRHNEAALREAGQIHARHIAAAGGDL 105
W AESTRLYH LH IA+TIRHNEA LREAGQ HA HI AAG DL
Sbjct 74 WGAESTRLYHALHTIAETIRHNEALLREAGQNHAHHIGAAGADL 117
>gi|118616637|ref|YP_904969.1| EsaT-6 like protein, EsxU [Mycobacterium ulcerans Agy99]
gi|118568747|gb|ABL03498.1| EsaT-6 like protein, EsxU [Mycobacterium ulcerans Agy99]
Length=117
Score = 157 bits (397), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 76/100 (76%), Positives = 84/100 (84%), Gaps = 0/100 (0%)
Query 5 NTLNADFDLMRSVAGITDARNEEIRAMLQAFIGRMSGVPPSVWGGLAAARFQDVVDRWNA 64
NTL+ADF LMR+VA TDARNEEIRA+LQAFIGRM+ VP SVWGG+AA RF+ +DRW A
Sbjct 17 NTLSADFHLMRTVAATTDARNEEIRALLQAFIGRMNDVPASVWGGVAAVRFKHAMDRWGA 76
Query 65 ESTRLYHVLHAIADTIRHNEAALREAGQIHARHIAAAGGD 104
ESTRLYH LH IA+TIRHNEA LREAGQ HA HI AAG D
Sbjct 77 ESTRLYHALHTIAETIRHNEALLREAGQNHAHHIGAAGAD 116
>gi|296165843|ref|ZP_06848333.1| Esat-6 like protein esxU [Mycobacterium parascrofulaceum ATCC
BAA-614]
gi|295898799|gb|EFG78315.1| Esat-6 like protein esxU [Mycobacterium parascrofulaceum ATCC
BAA-614]
Length=123
Score = 154 bits (388), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 72/89 (81%), Positives = 79/89 (89%), Gaps = 0/89 (0%)
Query 1 VSTPNTLNADFDLMRSVAGITDARNEEIRAMLQAFIGRMSGVPPSVWGGLAAARFQDVVD 60
++ PNTL+ DFDLMRSVA TDARNEEIRAMLQAFIGRM GVPPSVWGG AAARF+DV+D
Sbjct 19 MTAPNTLSTDFDLMRSVAAATDARNEEIRAMLQAFIGRMGGVPPSVWGGTAAARFKDVLD 78
Query 61 RWNAESTRLYHVLHAIADTIRHNEAALRE 89
RWNAES RLYHVLHAI +TIRHN A L+E
Sbjct 79 RWNAESLRLYHVLHAIGETIRHNAATLQE 107
>gi|342861880|ref|ZP_08718525.1| hypothetical protein MCOL_23440 [Mycobacterium colombiense CECT
3035]
gi|342130697|gb|EGT84001.1| hypothetical protein MCOL_23440 [Mycobacterium colombiense CECT
3035]
Length=105
Score = 149 bits (375), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 70/92 (77%), Positives = 79/92 (86%), Gaps = 0/92 (0%)
Query 1 VSTPNTLNADFDLMRSVAGITDARNEEIRAMLQAFIGRMSGVPPSVWGGLAAARFQDVVD 60
++ N L+ DFDLMRSVAG TDARNEEIRAMLQAF+GRM+GVP S WGGLAAARF+DV+D
Sbjct 1 MAASNPLSTDFDLMRSVAGTTDARNEEIRAMLQAFVGRMNGVPRSAWGGLAAARFKDVMD 60
Query 61 RWNAESTRLYHVLHAIADTIRHNEAALREAGQ 92
RWN ES RLYH L+ IADTIRHN A L+EAGQ
Sbjct 61 RWNVESLRLYHALNTIADTIRHNAATLQEAGQ 92
>gi|120402473|ref|YP_952302.1| hypothetical protein Mvan_1464 [Mycobacterium vanbaalenii PYR-1]
gi|119955291|gb|ABM12296.1| conserved hypothetical protein [Mycobacterium vanbaalenii PYR-1]
Length=110
Score = 131 bits (329), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 65/99 (66%), Positives = 75/99 (76%), Gaps = 0/99 (0%)
Query 7 LNADFDLMRSVAGITDARNEEIRAMLQAFIGRMSGVPPSVWGGLAAARFQDVVDRWNAES 66
L DFDLM SVAG TDARNEEIRAMLQ+FIG MS VPPSVWGG AA RF++VV+RWNAES
Sbjct 12 LTTDFDLMVSVAGKTDARNEEIRAMLQSFIGAMSSVPPSVWGGAAATRFREVVERWNAES 71
Query 67 TRLYHVLHAIADTIRHNEAALREAGQIHARHIAAAGGDL 105
RL+ L IA+TIR NE LRE H++ IA+ +L
Sbjct 72 LRLHAALQRIAETIRDNERILREVADGHSQRIASVAANL 110
>gi|118471975|ref|YP_885920.1| hypothetical protein MSMEG_1538 [Mycobacterium smegmatis str.
MC2 155]
gi|118173262|gb|ABK74158.1| conserved hypothetical protein [Mycobacterium smegmatis str.
MC2 155]
Length=103
Score = 129 bits (323), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 63/105 (60%), Positives = 78/105 (75%), Gaps = 2/105 (1%)
Query 1 VSTPNTLNADFDLMRSVAGITDARNEEIRAMLQAFIGRMSGVPPSVWGGLAAARFQDVVD 60
+STP L ADFD+M +VAG D RN++IR+MLQ FIGRM+ VPP+VWGG+AA RF+DVV+
Sbjct 1 MSTP--LGADFDVMTTVAGQIDVRNDDIRSMLQTFIGRMNTVPPTVWGGVAATRFRDVVE 58
Query 61 RWNAESTRLYHVLHAIADTIRHNEAALREAGQIHARHIAAAGGDL 105
RWNAES L+ L IA+TIRHNE LREA HA+ + G L
Sbjct 59 RWNAESLTLHTTLQRIAETIRHNERTLREAADGHAQRLGGVGETL 103
>gi|145225533|ref|YP_001136211.1| hypothetical protein Mflv_4957 [Mycobacterium gilvum PYR-GCK]
gi|315445886|ref|YP_004078765.1| hypothetical protein Mspyr1_43740 [Mycobacterium sp. Spyr1]
gi|145218019|gb|ABP47423.1| conserved hypothetical protein [Mycobacterium gilvum PYR-GCK]
gi|315264189|gb|ADU00931.1| uncharacterized conserved protein [Mycobacterium sp. Spyr1]
Length=110
Score = 127 bits (318), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 64/110 (59%), Positives = 82/110 (75%), Gaps = 5/110 (4%)
Query 1 VSTPN-----TLNADFDLMRSVAGITDARNEEIRAMLQAFIGRMSGVPPSVWGGLAAARF 55
+STP+ L DFDLM SVAG T+ARN+EIR+ML +FIG MS VPPSVWGG+AA RF
Sbjct 1 MSTPSGAHGSALATDFDLMVSVAGRTEARNDEIRSMLSSFIGAMSSVPPSVWGGVAAVRF 60
Query 56 QDVVDRWNAESTRLYHVLHAIADTIRHNEAALREAGQIHARHIAAAGGDL 105
++VV+RWNAES +L+ L IA+TIR NE LR+ + H++ IA+AG L
Sbjct 61 REVVERWNAESVKLHSALQRIAETIRDNERLLRDVAEGHSQRIASAGTGL 110
>gi|126433758|ref|YP_001069449.1| hypothetical protein Mjls_1155 [Mycobacterium sp. JLS]
gi|126233558|gb|ABN96958.1| conserved hypothetical protein [Mycobacterium sp. JLS]
Length=107
Score = 126 bits (317), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 61/103 (60%), Positives = 73/103 (71%), Gaps = 0/103 (0%)
Query 3 TPNTLNADFDLMRSVAGITDARNEEIRAMLQAFIGRMSGVPPSVWGGLAAARFQDVVDRW 62
T LN DF+LM SVAG DARNEEIRAMLQ+FIGRM+ VPPSVWGG+AA RF++VVDRW
Sbjct 5 TGGALNTDFELMGSVAGAIDARNEEIRAMLQSFIGRMTSVPPSVWGGVAAVRFREVVDRW 64
Query 63 NAESTRLYHVLHAIADTIRHNEAALREAGQIHARHIAAAGGDL 105
N ES +L+ L IA+T+R N+ L A H+ I G L
Sbjct 65 NGESVKLHTALQRIAETMRSNQQTLIAASDGHSHQIGVVGTSL 107
>gi|108798100|ref|YP_638297.1| hypothetical protein Mmcs_1128 [Mycobacterium sp. MCS]
gi|119867196|ref|YP_937148.1| hypothetical protein Mkms_1145 [Mycobacterium sp. KMS]
gi|108768519|gb|ABG07241.1| conserved hypothetical protein [Mycobacterium sp. MCS]
gi|119693285|gb|ABL90358.1| conserved hypothetical protein [Mycobacterium sp. KMS]
Length=107
Score = 124 bits (312), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 60/103 (59%), Positives = 73/103 (71%), Gaps = 0/103 (0%)
Query 3 TPNTLNADFDLMRSVAGITDARNEEIRAMLQAFIGRMSGVPPSVWGGLAAARFQDVVDRW 62
T LN DF+LM SVAG DARNEEIRAMLQ+FIGR++ VPPSVWGG+AA RF++VVDRW
Sbjct 5 TGGALNTDFELMGSVAGAIDARNEEIRAMLQSFIGRVTSVPPSVWGGVAAVRFREVVDRW 64
Query 63 NAESTRLYHVLHAIADTIRHNEAALREAGQIHARHIAAAGGDL 105
N ES +L+ L IA+T+R N+ L A H+ I G L
Sbjct 65 NGESVKLHTALQRIAETMRSNQQTLIAASDGHSHQIGVVGTSL 107
>gi|333991911|ref|YP_004524525.1| hypothetical protein JDM601_3271 [Mycobacterium sp. JDM601]
gi|333487879|gb|AEF37271.1| conserved hypothetical protein [Mycobacterium sp. JDM601]
Length=75
Score = 103 bits (258), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 48/72 (67%), Positives = 56/72 (78%), Gaps = 0/72 (0%)
Query 31 MLQAFIGRMSGVPPSVWGGLAAARFQDVVDRWNAESTRLYHVLHAIADTIRHNEAALREA 90
MLQ+F+GRM VPPSVW G+AAARFQDV+DRWN ES RL+ L IA+TIR NE ALRE
Sbjct 1 MLQSFVGRMRAVPPSVWSGMAAARFQDVLDRWNTESLRLHQALARIAETIRQNERALREV 60
Query 91 GQIHARHIAAAG 102
+ H+ HIAA G
Sbjct 61 AESHSHHIAAVG 72
>gi|237786316|ref|YP_002907021.1| hypothetical protein ckrop_1757 [Corynebacterium kroppenstedtii
DSM 44385]
gi|237759228|gb|ACR18478.1| hypothetical protein ckrop_1757 [Corynebacterium kroppenstedtii
DSM 44385]
Length=103
Score = 54.3 bits (129), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/92 (34%), Positives = 50/92 (55%), Gaps = 1/92 (1%)
Query 12 DLMRSVAGITDARNEEIRAMLQAFIGRMSGVPPSVWGGLAAARFQDVVDRWNAESTRLYH 71
+LM + AG DA N++++A LQ G + GV + W G A+ F +++ +WN + RL
Sbjct 10 ELMTTTAGKVDAVNDQVQAELQRLQGTVDGVAGA-WKGNASVAFGELMAQWNDAALRLRE 68
Query 72 VLHAIADTIRHNEAALREAGQIHARHIAAAGG 103
L +I+D IR N +A + +A GG
Sbjct 69 ALSSISDNIRANASAFATTEEQNAASFTQLGG 100
>gi|213965007|ref|ZP_03393206.1| conserved hypothetical protein [Corynebacterium amycolatum SK46]
gi|213952543|gb|EEB63926.1| conserved hypothetical protein [Corynebacterium amycolatum SK46]
Length=108
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/108 (34%), Positives = 52/108 (49%), Gaps = 10/108 (9%)
Query 4 PNTLNADFDLMRSVAGITDARNEEIRAMLQAFIGRMSGVPPSV---WGGLAAARFQDVVD 60
N A+ D M + AG D N E+ Q +GR+ GV + W G A F D++
Sbjct 2 ANLFAAESDQMTTTAGDVDGVNSEV----QGELGRIRGVVDGLAGEWKGQAKDSFDDLML 57
Query 61 RWNAESTRLYHVLHAIADTIRHNEAAL---REAGQIHARHIAAAGGDL 105
RW+ + RL + L IAD IR N ++ + G + +AAAG L
Sbjct 58 RWDDAAMRLSNALTDIADNIRANSSSFDAGEDEGASSFKQVAAAGASL 105
>gi|145294749|ref|YP_001137570.1| hypothetical protein cgR_0697 [Corynebacterium glutamicum R]
gi|140844669|dbj|BAF53668.1| hypothetical protein [Corynebacterium glutamicum R]
gi|344045943|gb|EGV41612.1| hypothetical protein CgS9114_02348 [Corynebacterium glutamicum
S9114]
Length=108
Score = 51.6 bits (122), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/104 (32%), Positives = 52/104 (50%), Gaps = 9/104 (8%)
Query 4 PNTLNADFDLMRSVAGITDARNEEIRAMLQAFIGRMSGVPPSV---WGGLAAARFQDVVD 60
N + D+M + AG D N+++ Q+ + R+ GV SV W G A F +++
Sbjct 2 SNLFRTESDVMLATAGQVDDINDQV----QSELSRLRGVVDSVRGSWAGQAQVSFDSLMN 57
Query 61 RWNAESTRLYHVLHAIADTIRHNEAALR--EAGQIHARHIAAAG 102
RWN+ + +L L +I+D IRHN + EA A + AG
Sbjct 58 RWNSSARQLQEALASISDNIRHNARSFENTEADNSQAFNAVGAG 101
>gi|305680103|ref|ZP_07402913.1| WXG100 family type VII secretion target [Corynebacterium matruchotii
ATCC 14266]
gi|305660723|gb|EFM50220.1| WXG100 family type VII secretion target [Corynebacterium matruchotii
ATCC 14266]
Length=104
Score = 50.8 bits (120), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/102 (30%), Positives = 49/102 (49%), Gaps = 1/102 (0%)
Query 4 PNTLNADFDLMRSVAGITDARNEEIRAMLQAFIGRMSGVPPSVWGGLAAARFQDVVDRWN 63
NT + D+M + AG D N E+++ L G + G+ + W G A A F +++ RW+
Sbjct 2 SNTFRTEADVMVTTAGQVDNTNSEVQSELSRLRGVVDGLRGA-WSGQAQASFDELMQRWD 60
Query 64 AESTRLYHVLHAIADTIRHNEAALREAGQIHARHIAAAGGDL 105
+ L L +I + IR N A +A+ + GG L
Sbjct 61 TNAKDLSDALTSIGENIRANARAFENVETSNAQSLNHVGGGL 102
>gi|337290069|ref|YP_004629090.1| hypothetical protein CULC22_00453 [Corynebacterium ulcerans BR-AD22]
gi|334696192|gb|AEG80989.1| hypothetical protein CULC809_00449 [Corynebacterium ulcerans
809]
gi|334698375|gb|AEG83171.1| hypothetical protein CULC22_00453 [Corynebacterium ulcerans BR-AD22]
Length=105
Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/83 (33%), Positives = 45/83 (55%), Gaps = 1/83 (1%)
Query 7 LNADFDLMRSVAGITDARNEEIRAMLQAFIGRMSGVPPSVWGGLAAARFQDVVDRWNAES 66
L + D+M + AG D N E+++ L G + G+ S W G A F +++ RW+A +
Sbjct 5 LRTEADVMMATAGRVDNTNAEVQSELARLRGIVDGIRGS-WAGAAQVSFDNLMQRWDASA 63
Query 67 TRLYHVLHAIADTIRHNEAALRE 89
+L L +I+D IR N A+ +
Sbjct 64 GKLRMALQSISDNIRSNAASFDQ 86
>gi|319948908|ref|ZP_08023018.1| hypothetical protein ES5_05942 [Dietzia cinnamea P4]
gi|319437429|gb|EFV92439.1| hypothetical protein ES5_05942 [Dietzia cinnamea P4]
Length=106
Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/97 (33%), Positives = 46/97 (48%), Gaps = 0/97 (0%)
Query 7 LNADFDLMRSVAGITDARNEEIRAMLQAFIGRMSGVPPSVWGGLAAARFQDVVDRWNAES 66
N M + A D N EI +L +S + SVW G A ARF ++ W +S
Sbjct 4 FNTHIGTMDTAARRVDDVNLEIDRLLGTVRDSVSQLGGSVWRGAAQARFTQIMTEWQQQS 63
Query 67 TRLYHVLHAIADTIRHNEAALREAGQIHARHIAAAGG 103
+L + L I++T+R N ++ A Q A I AGG
Sbjct 64 AKLNNALAGISETMRTNSSSFDAADQDSAALITRAGG 100
>gi|227505257|ref|ZP_03935306.1| conserved hypothetical protein [Corynebacterium striatum ATCC
6940]
gi|227198156|gb|EEI78204.1| conserved hypothetical protein [Corynebacterium striatum ATCC
6940]
Length=128
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/95 (32%), Positives = 48/95 (51%), Gaps = 7/95 (7%)
Query 12 DLMRSVAGITDARNEEIRAMLQAFIGRMSGVPPSV---WGGLAAARFQDVVDRWNAESTR 68
D+M + AG D+ N+E+ Q + R+ GV SV W G A F +++ R+N + +
Sbjct 33 DVMVATAGRVDSTNDEV----QGELTRLQGVVDSVRSNWDGRAQVSFDNLMQRYNTSAQQ 88
Query 69 LYHVLHAIADTIRHNEAALREAGQIHARHIAAAGG 103
L L AI+D IR N + +A+ + GG
Sbjct 89 LREALTAISDNIRDNARNFDDVEATNAQAFSNVGG 123
>gi|19551813|ref|NP_599815.1| hypothetical protein NCgl0554 [Corynebacterium glutamicum ATCC
13032]
gi|62389468|ref|YP_224870.1| hypothetical protein cg0671 [Corynebacterium glutamicum ATCC
13032]
gi|21323344|dbj|BAB97972.1| Hypothetical protein [Corynebacterium glutamicum ATCC 13032]
gi|41324802|emb|CAF19284.1| conserved hypothetical protein [Corynebacterium glutamicum ATCC
13032]
Length=108
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/104 (31%), Positives = 50/104 (49%), Gaps = 9/104 (8%)
Query 4 PNTLNADFDLMRSVAGITDARNEEIRAMLQAFIGRMSGVPPSV---WGGLAAARFQDVVD 60
N + D+M + A D N+++ Q + R+ GV SV W G A F +++
Sbjct 2 SNLFRTESDVMLATASQVDDINDQV----QGELSRLRGVVDSVRGSWAGQAQVSFDSLMN 57
Query 61 RWNAESTRLYHVLHAIADTIRHNEAALR--EAGQIHARHIAAAG 102
RWN+ + +L L +I+D IRHN + EA A + AG
Sbjct 58 RWNSSARQLQEALASISDNIRHNARSFENTEADNSQAFNAVGAG 101
>gi|38233167|ref|NP_938934.1| CFP-10-like protein [Corynebacterium diphtheriae NCTC 13129]
gi|38199426|emb|CAE49070.1| Conserved hypothetical CFP-10-like protein [Corynebacterium diphtheriae]
Length=105
Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/92 (32%), Positives = 44/92 (48%), Gaps = 1/92 (1%)
Query 12 DLMRSVAGITDARNEEIRAMLQAFIGRMSGVPPSVWGGLAAARFQDVVDRWNAESTRLYH 71
D+MR+ A D N+E+ A L + GV S W G A F +++ RW+A + L
Sbjct 10 DVMRNTAHRVDDTNQEVSAELSRLRSIVDGVRAS-WEGTAQVSFDNLMQRWDASAKGLQD 68
Query 72 VLHAIADTIRHNEAALREAGQIHARHIAAAGG 103
L +I+D IR N + + +A GG
Sbjct 69 ALQSISDNIRGNATSFENVEADNQSAFSAVGG 100
>gi|255324787|ref|ZP_05365901.1| conserved hypothetical protein [Corynebacterium tuberculostearicum
SK141]
gi|255298262|gb|EET77565.1| conserved hypothetical protein [Corynebacterium tuberculostearicum
SK141]
Length=104
Score = 47.4 bits (111), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/81 (35%), Positives = 41/81 (51%), Gaps = 7/81 (8%)
Query 6 TLNADFDLMRSVAGITDARNEEIRAMLQAFIGRMSGVPPSV---WGGLAAARFQDVVDRW 62
T D+M + AG D N+E++ L R+ GV SV W G A F D++ R+
Sbjct 4 TFKTQADVMVATAGKVDNTNDEVQGELT----RLQGVVDSVRGSWVGQAQVSFDDLMQRY 59
Query 63 NAESTRLYHVLHAIADTIRHN 83
N + +L L +I+D IR N
Sbjct 60 NTSAQQLREALASISDNIRSN 80
>gi|311740022|ref|ZP_07713856.1| conserved hypothetical protein [Corynebacterium pseudogenitalium
ATCC 33035]
gi|311305095|gb|EFQ81164.1| conserved hypothetical protein [Corynebacterium pseudogenitalium
ATCC 33035]
Length=104
Score = 47.4 bits (111), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/81 (35%), Positives = 41/81 (51%), Gaps = 7/81 (8%)
Query 6 TLNADFDLMRSVAGITDARNEEIRAMLQAFIGRMSGVPPSV---WGGLAAARFQDVVDRW 62
T D+M + AG D N+E++ L R+ GV SV W G A F D++ R+
Sbjct 4 TFKTQADVMIATAGKVDNTNDEVQGELT----RLQGVVDSVRGSWVGQAQVSFDDLMQRY 59
Query 63 NAESTRLYHVLHAIADTIRHN 83
N + +L L +I+D IR N
Sbjct 60 NTSAQQLREALASISDNIRSN 80
>gi|227832281|ref|YP_002833988.1| hypothetical protein cauri_0453 [Corynebacterium aurimucosum
ATCC 700975]
gi|262183863|ref|ZP_06043284.1| hypothetical protein CaurA7_07718 [Corynebacterium aurimucosum
ATCC 700975]
gi|227453297|gb|ACP32050.1| hypothetical protein cauri_0453 [Corynebacterium aurimucosum
ATCC 700975]
Length=105
Score = 47.4 bits (111), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/81 (34%), Positives = 44/81 (55%), Gaps = 7/81 (8%)
Query 6 TLNADFDLMRSVAGITDARNEEIRAMLQAFIGRMSGVPPSV---WGGLAAARFQDVVDRW 62
T + D+M + AG D+ N+E+ Q + R+ GV SV W G A F +++ R+
Sbjct 4 TFRTEADVMVATAGRVDSTNDEV----QGELTRLQGVVDSVRGSWAGRAQVSFDNLMQRY 59
Query 63 NAESTRLYHVLHAIADTIRHN 83
N+ + +L L AI++ IR N
Sbjct 60 NSSAQQLREALTAISENIRDN 80
>gi|300857818|ref|YP_003782801.1| hypothetical protein cpfrc_00401 [Corynebacterium pseudotuberculosis
FRC41]
gi|300685272|gb|ADK28194.1| hypothetical protein cpfrc_00401 [Corynebacterium pseudotuberculosis
FRC41]
gi|302330109|gb|ADL20303.1| WXG domain-containing protein [Corynebacterium pseudotuberculosis
1002]
gi|341824217|gb|AEK91738.1| WXG domain-containing protein [Corynebacterium pseudotuberculosis
PAT10]
Length=109
Score = 47.0 bits (110), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/78 (34%), Positives = 42/78 (54%), Gaps = 1/78 (1%)
Query 12 DLMRSVAGITDARNEEIRAMLQAFIGRMSGVPPSVWGGLAAARFQDVVDRWNAESTRLYH 71
D+M + A D N E+++ L G + GV S W G A A F +++ RW+A + +L
Sbjct 10 DVMVATASRVDNTNAEVQSELARLRGIVDGVRGS-WAGSAQASFDNLMQRWDASAGKLRM 68
Query 72 VLHAIADTIRHNEAALRE 89
L +I+D IR N + +
Sbjct 69 ALQSISDNIRSNATSFDQ 86
>gi|25027138|ref|NP_737192.1| hypothetical protein CE0582 [Corynebacterium efficiens YS-314]
gi|259506730|ref|ZP_05749630.1| conserved hypothetical CFP-10-like protein [Corynebacterium efficiens
YS-314]
gi|23492418|dbj|BAC17392.1| hypothetical protein [Corynebacterium efficiens YS-314]
gi|259165671|gb|EEW50225.1| conserved hypothetical CFP-10-like protein [Corynebacterium efficiens
YS-314]
Length=106
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/103 (30%), Positives = 49/103 (48%), Gaps = 7/103 (6%)
Query 4 PNTLNADFDLMRSVAGITDARNEEIRAMLQAFIGRMSGVPPSV---WGGLAAARFQDVVD 60
N + D+M + AG D N+++ Q + R+ GV SV W G A F +++
Sbjct 2 SNLFRTESDVMLATAGQVDDTNDQV----QNELSRLRGVVDSVRGSWAGQAQVSFDALMN 57
Query 61 RWNAESTRLYHVLHAIADTIRHNEAALREAGQIHARHIAAAGG 103
RWN + +L L +I+ IR N + +A+ +A GG
Sbjct 58 RWNDSARQLQEALDSISTNIRANARSFDSTEADNAQAFSAVGG 100
>gi|333921706|ref|YP_004495287.1| hypothetical protein AS9A_4053 [Amycolicicoccus subflavus DQS3-9A1]
gi|333483927|gb|AEF42487.1| hypothetical protein AS9A_4053 [Amycolicicoccus subflavus DQS3-9A1]
Length=104
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/81 (34%), Positives = 45/81 (56%), Gaps = 1/81 (1%)
Query 25 NEEIRAMLQAFIGRMSGVPPSVWGGLAAARFQDVVDRWNAESTRLYHVLHAIADTIRHNE 84
N +++A+L A G+ + V + W G A F ++ RW++E+ +L L AI+D IR N
Sbjct 23 NADVQALLSALRGKAAAVNGA-WEGEARRAFDALIVRWDSEARKLNDSLIAISDAIRSNS 81
Query 85 AALREAGQIHARHIAAAGGDL 105
++ + Q H + AGG L
Sbjct 82 SSYDQTQQSHTSALNTAGGLL 102
>gi|227502707|ref|ZP_03932756.1| conserved hypothetical protein [Corynebacterium accolens ATCC
49725]
gi|306835283|ref|ZP_07468312.1| conserved hypothetical protein [Corynebacterium accolens ATCC
49726]
gi|227076437|gb|EEI14400.1| conserved hypothetical protein [Corynebacterium accolens ATCC
49725]
gi|304568827|gb|EFM44363.1| conserved hypothetical protein [Corynebacterium accolens ATCC
49726]
Length=104
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/81 (34%), Positives = 41/81 (51%), Gaps = 7/81 (8%)
Query 6 TLNADFDLMRSVAGITDARNEEIRAMLQAFIGRMSGVPPSV---WGGLAAARFQDVVDRW 62
T D+M S AG D N+E++ L R+ GV SV W G A F +++ R+
Sbjct 4 TFKTQADVMVSTAGRVDNTNDEVQGELT----RLQGVVDSVRGSWAGQAQVSFDNLMQRY 59
Query 63 NAESTRLYHVLHAIADTIRHN 83
N + +L L +I++ IR N
Sbjct 60 NTSAQQLREALTSISENIRSN 80
>gi|334563184|ref|ZP_08516175.1| hypothetical protein CbovD2_01306 [Corynebacterium bovis DSM
20582]
Length=95
Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/89 (35%), Positives = 45/89 (51%), Gaps = 4/89 (4%)
Query 12 DLMRSVAGITDARNEEIRAMLQAFIGRMSGVPPSVWGGLAAARFQDVVDRWNAESTRLYH 71
D+M AG D N E++A L+ G + V + W G A A F ++ RWN + L+
Sbjct 8 DVMHDAAGKVDTVNSEVQAELRRLQGTVDSVSGA-WQGEAQAAFGQLMVRWNDSARELHQ 66
Query 72 VLHAIADTIRHNEAALREAGQIHARHIAA 100
L +IA+ IR N R Q+ A + AA
Sbjct 67 ALTSIAENIRAN---ARGFAQVEADNAAA 92
>gi|340795258|ref|YP_004760721.1| hypothetical protein CVAR_2303 [Corynebacterium variabile DSM
44702]
gi|340535168|gb|AEK37648.1| hypothetical protein CVAR_2303 [Corynebacterium variabile DSM
44702]
Length=94
Score = 44.7 bits (104), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/89 (33%), Positives = 47/89 (53%), Gaps = 4/89 (4%)
Query 12 DLMRSVAGITDARNEEIRAMLQAFIGRMSGVPPSVWGGLAAARFQDVVDRWNAESTRLYH 71
D+M + AG D N++++A L G + V VW G A A F +++ RWN + L
Sbjct 8 DVMHATAGKVDTVNDQVQAELNRLQGTVDSVQ-GVWRGEAQASFGNLMVRWNDSARELRA 66
Query 72 VLHAIADTIRHNEAALREAGQIHARHIAA 100
L +IA+ IR N + + Q+ ++AA
Sbjct 67 ALTSIAENIRGNARSFQ---QVEDDNVAA 92
>gi|225020499|ref|ZP_03709691.1| hypothetical protein CORMATOL_00506 [Corynebacterium matruchotii
ATCC 33806]
gi|224946888|gb|EEG28097.1| hypothetical protein CORMATOL_00506 [Corynebacterium matruchotii
ATCC 33806]
Length=93
Score = 44.7 bits (104), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/92 (30%), Positives = 44/92 (48%), Gaps = 1/92 (1%)
Query 14 MRSVAGITDARNEEIRAMLQAFIGRMSGVPPSVWGGLAAARFQDVVDRWNAESTRLYHVL 73
M + AG D N E+++ L G + G+ + W G A A F +++ RW+ + L L
Sbjct 1 MVTTAGQVDNTNSEVQSELSRLRGVVDGLRGA-WSGQAQASFDELMQRWDTNAKDLSDAL 59
Query 74 HAIADTIRHNEAALREAGQIHARHIAAAGGDL 105
+I + IR N A +A+ + GG L
Sbjct 60 TSIGENIRANARAFENVETSNAQSLNHVGGGL 91
>gi|302205554|gb|ADL09896.1| WXG domain-containing protein [Corynebacterium pseudotuberculosis
C231]
gi|308275789|gb|ADO25688.1| Conserved hypothetical protein [Corynebacterium pseudotuberculosis
I19]
Length=94
Score = 44.3 bits (103), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/70 (36%), Positives = 38/70 (55%), Gaps = 1/70 (1%)
Query 14 MRSVAGITDARNEEIRAMLQAFIGRMSGVPPSVWGGLAAARFQDVVDRWNAESTRLYHVL 73
M + A D N E+++ L G + GV S W G A A F +++ RW+A + +L L
Sbjct 1 MVATASRVDNTNAEVQSELARLRGIVDGVRGS-WAGSAQASFDNLMQRWDASAGKLRMAL 59
Query 74 HAIADTIRHN 83
+I+D IR N
Sbjct 60 QSISDNIRSN 69
>gi|172040053|ref|YP_001799767.1| hypothetical protein cur_0373 [Corynebacterium urealyticum DSM
7109]
gi|171851357|emb|CAQ04333.1| hypothetical protein cu0373 [Corynebacterium urealyticum DSM
7109]
Length=94
Score = 43.9 bits (102), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/61 (32%), Positives = 35/61 (58%), Gaps = 3/61 (4%)
Query 26 EEIRAMLQAFIGRMSGV---PPSVWGGLAAARFQDVVDRWNAESTRLYHVLHAIADTIRH 82
+++ A +Q + R+ G+ VW G A FQ++++RWN + L L++I++ IR
Sbjct 18 DQVNASIQGELSRLQGIVAETSGVWRGQAQGAFQNLMERWNTSARELSEALNSISENIRA 77
Query 83 N 83
N
Sbjct 78 N 78
>gi|336326387|ref|YP_004606353.1| hypothetical protein CRES_1836 [Corynebacterium resistens DSM
45100]
gi|336102369|gb|AEI10189.1| hypothetical protein CRES_1836 [Corynebacterium resistens DSM
45100]
Length=94
Score = 42.7 bits (99), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 26/81 (33%), Positives = 39/81 (49%), Gaps = 7/81 (8%)
Query 6 TLNADFDLMRSVAGITDARNEEIRAMLQAFIGRMSGV---PPSVWGGLAAARFQDVVDRW 62
+ D M A D N+E+++ L+ R+ GV S W G A FQ+++ RW
Sbjct 2 SFRTDVATMHKAASNVDGTNDEVQSELK----RLRGVVQETSSSWKGDAQGAFQNLMLRW 57
Query 63 NAESTRLYHVLHAIADTIRHN 83
+ + L L +IAD IR N
Sbjct 58 DTNARELSEALRSIADNIRRN 78
>gi|229821685|ref|YP_002883211.1| hypothetical protein Bcav_3205 [Beutenbergia cavernae DSM 12333]
gi|229821690|ref|YP_002883216.1| hypothetical protein Bcav_3210 [Beutenbergia cavernae DSM 12333]
gi|229567598|gb|ACQ81449.1| protein of unknown function DUF909 [Beutenbergia cavernae DSM
12333]
gi|229567603|gb|ACQ81454.1| protein of unknown function DUF909 [Beutenbergia cavernae DSM
12333]
Length=103
Score = 40.4 bits (93), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 35/60 (59%), Gaps = 1/60 (1%)
Query 27 EIRAMLQAFIGRMSGVPPSVWGGLAAARFQDVVDRWNAESTRLYHVLHAIADTIRHNEAA 86
E+R+ L A G++SG+ W GL AA F ++++RW ++T++ L+ + ++ A
Sbjct 25 ELRSELSALEGKLSGLGAQ-WQGLGAAAFTNLMNRWREDATKIIDALNEFEAKLNESQTA 83
>gi|312140877|ref|YP_004008213.1| esx cluster cfp-10 protein [Rhodococcus equi 103S]
gi|325675485|ref|ZP_08155169.1| hypothetical protein HMPREF0724_12951 [Rhodococcus equi ATCC
33707]
gi|311890216|emb|CBH49534.1| putative esx cluster CFP-10 protein [Rhodococcus equi 103S]
gi|325553456|gb|EGD23134.1| hypothetical protein HMPREF0724_12951 [Rhodococcus equi ATCC
33707]
Length=104
Score = 39.7 bits (91), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 22/80 (28%), Positives = 35/80 (44%), Gaps = 1/80 (1%)
Query 26 EEIRAMLQAFIGRMSGVPPSVWGGLAAARFQDVVDRWNAESTRLYHVLHAIADTIRHNEA 85
EEI +L + G+ + W G AA F +++RW+ + +L L AI + I+ N
Sbjct 24 EEIAGLLGNLRSEVDGIRGA-WEGSAAIAFHSLMERWDGSAKKLNDALQAIGENIKSNSV 82
Query 86 ALREAGQIHARHIAAAGGDL 105
Q H + G L
Sbjct 83 TFDTTQQDHTASLNNVAGSL 102
>gi|300779783|ref|ZP_07089639.1| CFP-10 family protein [Corynebacterium genitalium ATCC 33030]
gi|300533893|gb|EFK54952.1| CFP-10 family protein [Corynebacterium genitalium ATCC 33030]
Length=105
Score = 39.3 bits (90), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 26/77 (34%), Positives = 36/77 (47%), Gaps = 1/77 (1%)
Query 7 LNADFDLMRSVAGITDARNEEIRAMLQAFIGRMSGVPPSVWGGLAAARFQDVVDRWNAES 66
+ + D+MR+ A + NEEI L G S WGG A F +++ R++
Sbjct 4 MQTEADVMRAAAKEVETTNEEINGELNRLQTLAEGAR-SHWGGTAQVSFNELMMRYDDAE 62
Query 67 TRLYHVLHAIADTIRHN 83
RL L AIA IR N
Sbjct 63 RRLGEALTAIAMNIRDN 79
>gi|68536838|ref|YP_251543.1| hypothetical protein jk1748 [Corynebacterium jeikeium K411]
gi|260579197|ref|ZP_05847087.1| conserved hypothetical CFP-10-like protein [Corynebacterium jeikeium
ATCC 43734]
gi|68264437|emb|CAI37925.1| hypothetical protein jk1748 [Corynebacterium jeikeium K411]
gi|258602683|gb|EEW15970.1| conserved hypothetical CFP-10-like protein [Corynebacterium jeikeium
ATCC 43734]
Length=95
Score = 39.3 bits (90), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 22/78 (29%), Positives = 35/78 (45%), Gaps = 1/78 (1%)
Query 6 TLNADFDLMRSVAGITDARNEEIRAMLQAFIGRMSGVPPSVWGGLAAARFQDVVDRWNAE 65
+ D M A D +E++ L G + V S W G A F +++RW+
Sbjct 2 SFKTDVSTMNQAANNVDRVKDEVQGELSRLRGVVDDVSGS-WKGQAQTSFHSLMERWDEN 60
Query 66 STRLYHVLHAIADTIRHN 83
+ +L L +IA+ IR N
Sbjct 61 ARKLNEALQSIAENIRAN 78
>gi|256390224|ref|YP_003111788.1| hypothetical protein Caci_1019 [Catenulispora acidiphila DSM
44928]
gi|256356450|gb|ACU69947.1| protein of unknown function DUF909 [Catenulispora acidiphila
DSM 44928]
Length=122
Score = 38.9 bits (89), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 24/77 (32%), Positives = 39/77 (51%), Gaps = 1/77 (1%)
Query 4 PNTLNADFDLMRSVAGITDARNEEIRAMLQAFIGRMSGVPPSVWGGLAAARFQDVVDRWN 63
P A D+M A NEEI +L + ++ + S W G A+ FQ++ RWN
Sbjct 21 PAQFGATLDVMAQAAAHVGTVNEEIATLLATLLAQLEPIA-STWKGAASGAFQNLHQRWN 79
Query 64 AESTRLYHVLHAIADTI 80
A++ +L L IA+++
Sbjct 80 ADARKLNGALGGIAESL 96
Lambda K H
0.321 0.133 0.395
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 131458853568
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40