BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv3446c Length=404 Score E Sequences producing significant alignments: (Bits) Value gi|15610582|ref|NP_217963.1| hypothetical protein Rv3446c [Mycob... 759 0.0 gi|289445047|ref|ZP_06434791.1| hypothetical alanine and valine ... 757 0.0 gi|340628417|ref|YP_004746869.1| hypothetical protein MCAN_34631... 756 0.0 gi|15843041|ref|NP_338078.1| hypothetical protein MT3551 [Mycoba... 756 0.0 gi|289759609|ref|ZP_06518987.1| conserved hypothetical protein [... 756 0.0 gi|297733105|ref|ZP_06962223.1| hypothetical protein MtubKR_1853... 748 0.0 gi|289449150|ref|ZP_06438894.1| hypothetical alanine and valine ... 406 4e-111 gi|183981123|ref|YP_001849414.1| hypothetical protein MMAR_1103 ... 373 3e-101 gi|118616636|ref|YP_904968.1| hypothetical protein MUL_0861 [Myc... 363 3e-98 gi|342861879|ref|ZP_08718524.1| hypothetical protein MCOL_23435 ... 353 4e-95 gi|240167795|ref|ZP_04746454.1| hypothetical protein MkanA1_0066... 350 2e-94 gi|41410340|ref|NP_963176.1| hypothetical protein MAP4242 [Mycob... 342 5e-92 gi|289449151|ref|ZP_06438895.1| hypothetical alanine and valine ... 328 1e-87 gi|254776819|ref|ZP_05218335.1| hypothetical protein MaviaA2_194... 305 7e-81 gi|118465986|ref|YP_883524.1| hypothetical protein MAV_4389 [Myc... 301 1e-79 gi|296165842|ref|ZP_06848332.1| conserved hypothetical protein [... 223 4e-56 gi|333991912|ref|YP_004524526.1| hypothetical protein JDM601_327... 219 9e-55 gi|254821782|ref|ZP_05226783.1| hypothetical protein MintA_17752... 207 2e-51 gi|120402472|ref|YP_952301.1| hypothetical protein Mvan_1463 [My... 199 8e-49 gi|126433757|ref|YP_001069448.1| hypothetical protein Mjls_1154 ... 185 1e-44 gi|169630834|ref|YP_001704483.1| hypothetical protein MAB_3755c ... 177 4e-42 gi|108798099|ref|YP_638296.1| hypothetical protein Mmcs_1127 [My... 175 1e-41 gi|254819230|ref|ZP_05224231.1| hypothetical protein MintA_04851... 164 2e-38 gi|315445887|ref|YP_004078766.1| hypothetical protein Mspyr1_437... 160 4e-37 gi|118471245|ref|YP_885919.1| hypothetical protein MSMEG_1537 [M... 156 5e-36 gi|296168733|ref|ZP_06850443.1| conserved hypothetical protein [... 156 6e-36 gi|145225534|ref|YP_001136212.1| hypothetical protein Mflv_4958 ... 152 8e-35 gi|262201639|ref|YP_003272847.1| hypothetical protein Gbro_1684 ... 69.3 1e-09 gi|343925124|ref|ZP_08764656.1| hypothetical protein GOALK_033_0... 62.4 1e-07 gi|326381858|ref|ZP_08203551.1| hypothetical protein SCNU_02902 ... 55.8 1e-05 gi|340524022|gb|AEK39227.1| molecular chaperone [Amycolatopsis m... 50.8 4e-04 gi|300782651|ref|YP_003762942.1| molecular chaperone [Amycolatop... 50.8 4e-04 gi|331699135|ref|YP_004335374.1| hypothetical protein Psed_5387 ... 49.7 8e-04 gi|257054510|ref|YP_003132342.1| molecular chaperone [Saccharomo... 48.5 0.002 gi|312140878|ref|YP_004008214.1| esx cluster membrane protein [R... 48.5 0.002 gi|325675484|ref|ZP_08155168.1| hypothetical protein HMPREF0724_... 47.8 0.003 gi|226305390|ref|YP_002765348.1| hypothetical protein RER_19010 ... 46.2 0.009 gi|256380554|ref|YP_003104214.1| Heat shock protein 70 [Actinosy... 45.8 0.014 gi|302524035|ref|ZP_07276377.1| predicted protein [Streptomyces ... 42.0 0.17 gi|296141058|ref|YP_003648301.1| hypothetical protein Tpau_3378 ... 38.5 2.2 gi|54022819|ref|YP_117061.1| hypothetical protein nfa8520 [Nocar... 36.6 8.8 >gi|15610582|ref|NP_217963.1| hypothetical protein Rv3446c [Mycobacterium tuberculosis H37Rv] gi|31794623|ref|NP_857116.1| hypothetical protein Mb3476c [Mycobacterium bovis AF2122/97] gi|121639367|ref|YP_979591.1| hypothetical protein BCG_3512c [Mycobacterium bovis BCG str. Pasteur 1173P2] 58 more sequence titles Length=404 Score = 759 bits (1959), Expect = 0.0, Method: Compositional matrix adjust. Identities = 403/404 (99%), Positives = 404/404 (100%), Gaps = 0/404 (0%) Query 1 VSPHRAVIEAGPGAIRRLCCGADVVADTAVSAAALAAIDDQVALLDERPVAVDSLWFDAL 60 +SPHRAVIEAGPGAIRRLCCGADVVADTAVSAAALAAIDDQVALLDERPVAVDSLWFDAL Sbjct 1 MSPHRAVIEAGPGAIRRLCCGADVVADTAVSAAALAAIDDQVALLDERPVAVDSLWFDAL 60 Query 61 RSVAVDHRDGPVVVHPSWWSAARVEVVTAAARTLTRDVVVHPRSWLLRQASSGVSAATVV 120 RSVAVDHRDGPVVVHPSWWSAARVEVVTAAARTLTRDVVVHPRSWLLRQASSGVSAATVV Sbjct 61 RSVAVDHRDGPVVVHPSWWSAARVEVVTAAARTLTRDVVVHPRSWLLRQASSGVSAATVV 120 Query 121 VEIAERLVLVAGAEVAAVARRTDAESVAGQVGSVIARMTRGITAVVLIDVPSTVAGAAAL 180 VEIAERLVLVAGAEVAAVARRTDAESVAGQVGSVIARMTRGITAVVLIDVPSTVAGAAAL Sbjct 121 VEIAERLVLVAGAEVAAVARRTDAESVAGQVGSVIARMTRGITAVVLIDVPSTVAGAAAL 180 Query 181 AAAIAGAVRGTGSSVVEIDGVRLARLARAALPPSDEPADPAARPATRSRVPTLARVAAAG 240 AAAIAGAVRGTGSSVVEIDGVRLARLARAALPPSDEPADPAARPATRSRVPTLARVAAAG Sbjct 181 AAAIAGAVRGTGSSVVEIDGVRLARLARAALPPSDEPADPAARPATRSRVPTLARVAAAG 240 Query 241 VALALLAPAAVVRHGATTLQRPPTTLLVEGRVALTIPADWSTQRVVSGPGSARVQVTSPA 300 VALALLAPAAVVRHGATTLQRPPTTLLVEGRVALTIPADWSTQRVVSGPGSARVQVTSPA Sbjct 241 VALALLAPAAVVRHGATTLQRPPTTLLVEGRVALTIPADWSTQRVVSGPGSARVQVTSPA 300 Query 301 DPEVALHVTQSPVPGETLPGTAQRLKRAIDASPAGVFVDFNPSDIRAGRPAVTYREVRAG 360 DPEVALHVTQSPVPGETLPGTAQRLKRAIDASPAGVFVDFNPSDIRAGRPAVTYREVRAG Sbjct 301 DPEVALHVTQSPVPGETLPGTAQRLKRAIDASPAGVFVDFNPSDIRAGRPAVTYREVRAG 360 Query 361 HQVRWTILLDGAVRISVGCQSGPGHEDLLREVCAQAVRSVHAVG 404 HQVRWTILLDGAVRISVGCQSGPGHEDLLREVCAQAVRSVHAVG Sbjct 361 HQVRWTILLDGAVRISVGCQSGPGHEDLLREVCAQAVRSVHAVG 404 >gi|289445047|ref|ZP_06434791.1| hypothetical alanine and valine rich protein [Mycobacterium tuberculosis T46] gi|289571680|ref|ZP_06451907.1| hypothetical alanine and valine rich protein [Mycobacterium tuberculosis T17] gi|289752171|ref|ZP_06511549.1| hypothetical alanine and valine rich protein [Mycobacterium tuberculosis T92] gi|289755579|ref|ZP_06514957.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054] gi|289417966|gb|EFD15206.1| hypothetical alanine and valine rich protein [Mycobacterium tuberculosis T46] gi|289545434|gb|EFD49082.1| hypothetical alanine and valine rich protein [Mycobacterium tuberculosis T17] gi|289692758|gb|EFD60187.1| hypothetical alanine and valine rich protein [Mycobacterium tuberculosis T92] gi|289696166|gb|EFD63595.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054] Length=404 Score = 757 bits (1955), Expect = 0.0, Method: Compositional matrix adjust. Identities = 402/404 (99%), Positives = 403/404 (99%), Gaps = 0/404 (0%) Query 1 VSPHRAVIEAGPGAIRRLCCGADVVADTAVSAAALAAIDDQVALLDERPVAVDSLWFDAL 60 +SPHRAVIEAGPGAIRRLCCGADVVADTAVSAAALAAIDDQVALLDERPVAVDSLWFDAL Sbjct 1 MSPHRAVIEAGPGAIRRLCCGADVVADTAVSAAALAAIDDQVALLDERPVAVDSLWFDAL 60 Query 61 RSVAVDHRDGPVVVHPSWWSAARVEVVTAAARTLTRDVVVHPRSWLLRQASSGVSAATVV 120 RSVAVDHRDGPVVVHPSWWSAARVEVVTAAARTLTRDVVVHPRSWLLRQASSGVSAATVV Sbjct 61 RSVAVDHRDGPVVVHPSWWSAARVEVVTAAARTLTRDVVVHPRSWLLRQASSGVSAATVV 120 Query 121 VEIAERLVLVAGAEVAAVARRTDAESVAGQVGSVIARMTRGITAVVLIDVPSTVAGAAAL 180 VEIAERLVLVAGAEVAAVARRTDAESVAGQVGSVIARMTRGIT VVLIDVPSTVAGAAAL Sbjct 121 VEIAERLVLVAGAEVAAVARRTDAESVAGQVGSVIARMTRGITVVVLIDVPSTVAGAAAL 180 Query 181 AAAIAGAVRGTGSSVVEIDGVRLARLARAALPPSDEPADPAARPATRSRVPTLARVAAAG 240 AAAIAGAVRGTGSSVVEIDGVRLARLARAALPPSDEPADPAARPATRSRVPTLARVAAAG Sbjct 181 AAAIAGAVRGTGSSVVEIDGVRLARLARAALPPSDEPADPAARPATRSRVPTLARVAAAG 240 Query 241 VALALLAPAAVVRHGATTLQRPPTTLLVEGRVALTIPADWSTQRVVSGPGSARVQVTSPA 300 VALALLAPAAVVRHGATTLQRPPTTLLVEGRVALTIPADWSTQRVVSGPGSARVQVTSPA Sbjct 241 VALALLAPAAVVRHGATTLQRPPTTLLVEGRVALTIPADWSTQRVVSGPGSARVQVTSPA 300 Query 301 DPEVALHVTQSPVPGETLPGTAQRLKRAIDASPAGVFVDFNPSDIRAGRPAVTYREVRAG 360 DPEVALHVTQSPVPGETLPGTAQRLKRAIDASPAGVFVDFNPSDIRAGRPAVTYREVRAG Sbjct 301 DPEVALHVTQSPVPGETLPGTAQRLKRAIDASPAGVFVDFNPSDIRAGRPAVTYREVRAG 360 Query 361 HQVRWTILLDGAVRISVGCQSGPGHEDLLREVCAQAVRSVHAVG 404 HQVRWTILLDGAVRISVGCQSGPGHEDLLREVCAQAVRSVHAVG Sbjct 361 HQVRWTILLDGAVRISVGCQSGPGHEDLLREVCAQAVRSVHAVG 404 >gi|340628417|ref|YP_004746869.1| hypothetical protein MCAN_34631 [Mycobacterium canettii CIPT 140010059] gi|340006607|emb|CCC45794.1| hypothetical alanine and VALINE rich protein [Mycobacterium canettii CIPT 140010059] Length=404 Score = 756 bits (1953), Expect = 0.0, Method: Compositional matrix adjust. Identities = 401/404 (99%), Positives = 402/404 (99%), Gaps = 0/404 (0%) Query 1 VSPHRAVIEAGPGAIRRLCCGADVVADTAVSAAALAAIDDQVALLDERPVAVDSLWFDAL 60 +SPHRAVIEAGPGAIRRLCCG DVVADTAVSAAALAAIDDQVALLDERPVAVDSLWFDAL Sbjct 1 MSPHRAVIEAGPGAIRRLCCGTDVVADTAVSAAALAAIDDQVALLDERPVAVDSLWFDAL 60 Query 61 RSVAVDHRDGPVVVHPSWWSAARVEVVTAAARTLTRDVVVHPRSWLLRQASSGVSAATVV 120 RSVAVDHRDGPVVVHPSWWSAARVEVVTAAARTLTRDVVVHPRSWLLRQASSGVSA TVV Sbjct 61 RSVAVDHRDGPVVVHPSWWSAARVEVVTAAARTLTRDVVVHPRSWLLRQASSGVSAVTVV 120 Query 121 VEIAERLVLVAGAEVAAVARRTDAESVAGQVGSVIARMTRGITAVVLIDVPSTVAGAAAL 180 VEIAERLVLVAGAEVAAVARRTDAESVAGQVGSVIARMTRGITAVVLIDVPSTVAGAAAL Sbjct 121 VEIAERLVLVAGAEVAAVARRTDAESVAGQVGSVIARMTRGITAVVLIDVPSTVAGAAAL 180 Query 181 AAAIAGAVRGTGSSVVEIDGVRLARLARAALPPSDEPADPAARPATRSRVPTLARVAAAG 240 AAAIAGAVRGTGSSVVEIDGVRLARLARAALPPSDEPADPAARPATRSRVPTLARVAAAG Sbjct 181 AAAIAGAVRGTGSSVVEIDGVRLARLARAALPPSDEPADPAARPATRSRVPTLARVAAAG 240 Query 241 VALALLAPAAVVRHGATTLQRPPTTLLVEGRVALTIPADWSTQRVVSGPGSARVQVTSPA 300 VALALLAPAAVVRHGATTLQRPPTTLLVEGRVALTIPADWSTQRVVSGPGSARVQVTSPA Sbjct 241 VALALLAPAAVVRHGATTLQRPPTTLLVEGRVALTIPADWSTQRVVSGPGSARVQVTSPA 300 Query 301 DPEVALHVTQSPVPGETLPGTAQRLKRAIDASPAGVFVDFNPSDIRAGRPAVTYREVRAG 360 DPEVALHVTQSPVPGETLPGTAQRLKRAIDASPAGVFVDFNPSDIRAGRPAVTYREVRAG Sbjct 301 DPEVALHVTQSPVPGETLPGTAQRLKRAIDASPAGVFVDFNPSDIRAGRPAVTYREVRAG 360 Query 361 HQVRWTILLDGAVRISVGCQSGPGHEDLLREVCAQAVRSVHAVG 404 HQVRWTILLDGAVRISVGCQSGPGHEDLLREVCAQAVRSVHAVG Sbjct 361 HQVRWTILLDGAVRISVGCQSGPGHEDLLREVCAQAVRSVHAVG 404 >gi|15843041|ref|NP_338078.1| hypothetical protein MT3551 [Mycobacterium tuberculosis CDC1551] gi|13883384|gb|AAK47892.1| hypothetical protein MT3551 [Mycobacterium tuberculosis CDC1551] gi|323717930|gb|EGB27119.1| hypothetical protein TMMG_03609 [Mycobacterium tuberculosis CDC1551A] Length=404 Score = 756 bits (1952), Expect = 0.0, Method: Compositional matrix adjust. Identities = 402/404 (99%), Positives = 403/404 (99%), Gaps = 0/404 (0%) Query 1 VSPHRAVIEAGPGAIRRLCCGADVVADTAVSAAALAAIDDQVALLDERPVAVDSLWFDAL 60 +SPHRAVIEAGPGAIRRLCCGADVVADTAVSAAALAAIDDQVALLDERPVAVDSLWFDAL Sbjct 1 MSPHRAVIEAGPGAIRRLCCGADVVADTAVSAAALAAIDDQVALLDERPVAVDSLWFDAL 60 Query 61 RSVAVDHRDGPVVVHPSWWSAARVEVVTAAARTLTRDVVVHPRSWLLRQASSGVSAATVV 120 RSVAVDHRDGPVVVHPSWWSAARVEVVTAAARTLTRDVVVHPRSWLLRQASSGVSAATVV Sbjct 61 RSVAVDHRDGPVVVHPSWWSAARVEVVTAAARTLTRDVVVHPRSWLLRQASSGVSAATVV 120 Query 121 VEIAERLVLVAGAEVAAVARRTDAESVAGQVGSVIARMTRGITAVVLIDVPSTVAGAAAL 180 VEIAERLVLVAGAEVAAVARRTDAESVAGQVGSVIARMTRGITAVVLIDVPSTVAGAAAL Sbjct 121 VEIAERLVLVAGAEVAAVARRTDAESVAGQVGSVIARMTRGITAVVLIDVPSTVAGAAAL 180 Query 181 AAAIAGAVRGTGSSVVEIDGVRLARLARAALPPSDEPADPAARPATRSRVPTLARVAAAG 240 AAAIAGAVRGTGSSVVEIDGVRLARLARAALPPSDEPADPAARPATRSRVPTLARVAAA Sbjct 181 AAAIAGAVRGTGSSVVEIDGVRLARLARAALPPSDEPADPAARPATRSRVPTLARVAAAC 240 Query 241 VALALLAPAAVVRHGATTLQRPPTTLLVEGRVALTIPADWSTQRVVSGPGSARVQVTSPA 300 VALALLAPAAVVRHGATTLQRPPTTLLVEGRVALTIPADWSTQRVVSGPGSARVQVTSPA Sbjct 241 VALALLAPAAVVRHGATTLQRPPTTLLVEGRVALTIPADWSTQRVVSGPGSARVQVTSPA 300 Query 301 DPEVALHVTQSPVPGETLPGTAQRLKRAIDASPAGVFVDFNPSDIRAGRPAVTYREVRAG 360 DPEVALHVTQSPVPGETLPGTAQRLKRAIDASPAGVFVDFNPSDIRAGRPAVTYREVRAG Sbjct 301 DPEVALHVTQSPVPGETLPGTAQRLKRAIDASPAGVFVDFNPSDIRAGRPAVTYREVRAG 360 Query 361 HQVRWTILLDGAVRISVGCQSGPGHEDLLREVCAQAVRSVHAVG 404 HQVRWTILLDGAVRISVGCQSGPGHEDLLREVCAQAVRSVHAVG Sbjct 361 HQVRWTILLDGAVRISVGCQSGPGHEDLLREVCAQAVRSVHAVG 404 >gi|289759609|ref|ZP_06518987.1| conserved hypothetical protein [Mycobacterium tuberculosis T85] gi|294995773|ref|ZP_06801464.1| hypothetical protein Mtub2_15023 [Mycobacterium tuberculosis 210] gi|289715173|gb|EFD79185.1| conserved hypothetical protein [Mycobacterium tuberculosis T85] gi|326905293|gb|EGE52226.1| hypothetical alanine and valine rich protein [Mycobacterium tuberculosis W-148] gi|339296270|gb|AEJ48381.1| hypothetical protein CCDC5079_3192 [Mycobacterium tuberculosis CCDC5079] gi|339299872|gb|AEJ51982.1| hypothetical protein CCDC5180_3145 [Mycobacterium tuberculosis CCDC5180] Length=404 Score = 756 bits (1951), Expect = 0.0, Method: Compositional matrix adjust. Identities = 402/404 (99%), Positives = 403/404 (99%), Gaps = 0/404 (0%) Query 1 VSPHRAVIEAGPGAIRRLCCGADVVADTAVSAAALAAIDDQVALLDERPVAVDSLWFDAL 60 +SPHRAVIEAGPGAIRRLCCGADVVADTAVSAAALAAIDDQVALLDERPVAVDSLWFDAL Sbjct 1 MSPHRAVIEAGPGAIRRLCCGADVVADTAVSAAALAAIDDQVALLDERPVAVDSLWFDAL 60 Query 61 RSVAVDHRDGPVVVHPSWWSAARVEVVTAAARTLTRDVVVHPRSWLLRQASSGVSAATVV 120 RSVAVDHRDGPVVVHPSWWSAARVEVVTAAARTLTRDVVVHPRSWLLRQASSGVSAATVV Sbjct 61 RSVAVDHRDGPVVVHPSWWSAARVEVVTAAARTLTRDVVVHPRSWLLRQASSGVSAATVV 120 Query 121 VEIAERLVLVAGAEVAAVARRTDAESVAGQVGSVIARMTRGITAVVLIDVPSTVAGAAAL 180 VEIAERLVLVAGAEVAAVARRTDAESVAGQVGSVIARMTRGITAVVLIDVPSTVAGAAAL Sbjct 121 VEIAERLVLVAGAEVAAVARRTDAESVAGQVGSVIARMTRGITAVVLIDVPSTVAGAAAL 180 Query 181 AAAIAGAVRGTGSSVVEIDGVRLARLARAALPPSDEPADPAARPATRSRVPTLARVAAAG 240 AAAIAGAVRGTGSSVVEIDGVRLARLARAALPPSDEPADPAARPATRSRVPTLARVAAAG Sbjct 181 AAAIAGAVRGTGSSVVEIDGVRLARLARAALPPSDEPADPAARPATRSRVPTLARVAAAG 240 Query 241 VALALLAPAAVVRHGATTLQRPPTTLLVEGRVALTIPADWSTQRVVSGPGSARVQVTSPA 300 VALALLAPAAVVRHGATTLQRPPTTLLVEGRVALTIPADWSTQ VVSGPGSARVQVTSPA Sbjct 241 VALALLAPAAVVRHGATTLQRPPTTLLVEGRVALTIPADWSTQPVVSGPGSARVQVTSPA 300 Query 301 DPEVALHVTQSPVPGETLPGTAQRLKRAIDASPAGVFVDFNPSDIRAGRPAVTYREVRAG 360 DPEVALHVTQSPVPGETLPGTAQRLKRAIDASPAGVFVDFNPSDIRAGRPAVTYREVRAG Sbjct 301 DPEVALHVTQSPVPGETLPGTAQRLKRAIDASPAGVFVDFNPSDIRAGRPAVTYREVRAG 360 Query 361 HQVRWTILLDGAVRISVGCQSGPGHEDLLREVCAQAVRSVHAVG 404 HQVRWTILLDGAVRISVGCQSGPGHEDLLREVCAQAVRSVHAVG Sbjct 361 HQVRWTILLDGAVRISVGCQSGPGHEDLLREVCAQAVRSVHAVG 404 >gi|297733105|ref|ZP_06962223.1| hypothetical protein MtubKR_18535 [Mycobacterium tuberculosis KZN R506] Length=398 Score = 748 bits (1930), Expect = 0.0, Method: Compositional matrix adjust. Identities = 397/398 (99%), Positives = 398/398 (100%), Gaps = 0/398 (0%) Query 7 VIEAGPGAIRRLCCGADVVADTAVSAAALAAIDDQVALLDERPVAVDSLWFDALRSVAVD 66 +IEAGPGAIRRLCCGADVVADTAVSAAALAAIDDQVALLDERPVAVDSLWFDALRSVAVD Sbjct 1 MIEAGPGAIRRLCCGADVVADTAVSAAALAAIDDQVALLDERPVAVDSLWFDALRSVAVD 60 Query 67 HRDGPVVVHPSWWSAARVEVVTAAARTLTRDVVVHPRSWLLRQASSGVSAATVVVEIAER 126 HRDGPVVVHPSWWSAARVEVVTAAARTLTRDVVVHPRSWLLRQASSGVSAATVVVEIAER Sbjct 61 HRDGPVVVHPSWWSAARVEVVTAAARTLTRDVVVHPRSWLLRQASSGVSAATVVVEIAER 120 Query 127 LVLVAGAEVAAVARRTDAESVAGQVGSVIARMTRGITAVVLIDVPSTVAGAAALAAAIAG 186 LVLVAGAEVAAVARRTDAESVAGQVGSVIARMTRGITAVVLIDVPSTVAGAAALAAAIAG Sbjct 121 LVLVAGAEVAAVARRTDAESVAGQVGSVIARMTRGITAVVLIDVPSTVAGAAALAAAIAG 180 Query 187 AVRGTGSSVVEIDGVRLARLARAALPPSDEPADPAARPATRSRVPTLARVAAAGVALALL 246 AVRGTGSSVVEIDGVRLARLARAALPPSDEPADPAARPATRSRVPTLARVAAAGVALALL Sbjct 181 AVRGTGSSVVEIDGVRLARLARAALPPSDEPADPAARPATRSRVPTLARVAAAGVALALL 240 Query 247 APAAVVRHGATTLQRPPTTLLVEGRVALTIPADWSTQRVVSGPGSARVQVTSPADPEVAL 306 APAAVVRHGATTLQRPPTTLLVEGRVALTIPADWSTQRVVSGPGSARVQVTSPADPEVAL Sbjct 241 APAAVVRHGATTLQRPPTTLLVEGRVALTIPADWSTQRVVSGPGSARVQVTSPADPEVAL 300 Query 307 HVTQSPVPGETLPGTAQRLKRAIDASPAGVFVDFNPSDIRAGRPAVTYREVRAGHQVRWT 366 HVTQSPVPGETLPGTAQRLKRAIDASPAGVFVDFNPSDIRAGRPAVTYREVRAGHQVRWT Sbjct 301 HVTQSPVPGETLPGTAQRLKRAIDASPAGVFVDFNPSDIRAGRPAVTYREVRAGHQVRWT 360 Query 367 ILLDGAVRISVGCQSGPGHEDLLREVCAQAVRSVHAVG 404 ILLDGAVRISVGCQSGPGHEDLLREVCAQAVRSVHAVG Sbjct 361 ILLDGAVRISVGCQSGPGHEDLLREVCAQAVRSVHAVG 398 >gi|289449150|ref|ZP_06438894.1| hypothetical alanine and valine rich protein [Mycobacterium tuberculosis CPHL_A] gi|289422108|gb|EFD19309.1| hypothetical alanine and valine rich protein [Mycobacterium tuberculosis CPHL_A] Length=210 Score = 406 bits (1043), Expect = 4e-111, Method: Compositional matrix adjust. Identities = 209/210 (99%), Positives = 210/210 (100%), Gaps = 0/210 (0%) Query 195 VVEIDGVRLARLARAALPPSDEPADPAARPATRSRVPTLARVAAAGVALALLAPAAVVRH 254 +VEIDGVRLARLARAALPPSDEPADPAARPATRSRVPTLARVAAAGVALALLAPAAVVRH Sbjct 1 MVEIDGVRLARLARAALPPSDEPADPAARPATRSRVPTLARVAAAGVALALLAPAAVVRH 60 Query 255 GATTLQRPPTTLLVEGRVALTIPADWSTQRVVSGPGSARVQVTSPADPEVALHVTQSPVP 314 GATTLQRPPTTLLVEGRVALTIPADWSTQRVVSGPGSARVQVTSPADPEVALHVTQSPVP Sbjct 61 GATTLQRPPTTLLVEGRVALTIPADWSTQRVVSGPGSARVQVTSPADPEVALHVTQSPVP 120 Query 315 GETLPGTAQRLKRAIDASPAGVFVDFNPSDIRAGRPAVTYREVRAGHQVRWTILLDGAVR 374 GETLPGTAQRLKRAIDASPAGVFVDFNPSDIRAGRPAVTYREVRAGHQVRWTILLDGAVR Sbjct 121 GETLPGTAQRLKRAIDASPAGVFVDFNPSDIRAGRPAVTYREVRAGHQVRWTILLDGAVR 180 Query 375 ISVGCQSGPGHEDLLREVCAQAVRSVHAVG 404 ISVGCQSGPGHEDLLREVCAQAVRSVHAVG Sbjct 181 ISVGCQSGPGHEDLLREVCAQAVRSVHAVG 210 >gi|183981123|ref|YP_001849414.1| hypothetical protein MMAR_1103 [Mycobacterium marinum M] gi|183174449|gb|ACC39559.1| conserved hypothetical protein [Mycobacterium marinum M] Length=414 Score = 373 bits (958), Expect = 3e-101, Method: Compositional matrix adjust. Identities = 237/417 (57%), Positives = 285/417 (69%), Gaps = 18/417 (4%) Query 1 VSPHRAVIEAGPGAIRRLCCGADVVADTAVSAAALAAIDDQVALLDERPVAVDSLWFDAL 60 ++ HRA+IEAGP AIRRLCCG++ VAD V AAALAAIDD VAL+ +RPV V SLW L Sbjct 1 MNAHRAMIEAGPQAIRRLCCGSETVADIEVCAAALAAIDDPVALVGDRPVQVWSLWSTTL 60 Query 61 RSVAVDHRDGPVVVHPSWWSAARVEVVTAAARTLTRD-----------VVVHPRSWLLRQ 109 R +A HR G +VVHPSWWSAARV VVT AAR + V + PRSWLLR+ Sbjct 61 RRLAEGHRAGMIVVHPSWWSAARVAVVTRAARAAGDEADDTDVDRAAQVWLRPRSWLLRR 120 Query 110 ASSGVSAATVVVEIAERLVLVAGAEVAAVARRTDAESVAGQVGSVIARMTRGITAVVLID 169 A++ ATVVVEIA+RLV V G AV RR + E A +V + + MT GI V+ID Sbjct 121 ATT---EATVVVEIADRLVAVVGEHRTAVPRRAEPERTAEEVAAAVDAMTPGIRTAVVID 177 Query 170 VPSTVAGAAALAAAIAGAVRGTGSSVVEIDGVRLARLARAAL--PPSDEPADPAARPATR 227 P VAGA+ L A+I A+ G G V +++ RL LAR+A P P R TR Sbjct 178 APGAVAGASELGASICAALVG-GQRVAQVNDPRLIGLARSATTEPVLGSAPAPPHRSITR 236 Query 228 SRVPTLARVAAAGVALALLAPAAVV-RHGATTLQRPPTTLLVEGRVALTIPADWSTQRVV 286 P +A + A VA+ ++A A R + + PTT+LVEG VA+ IP W TQRV+ Sbjct 237 LAGPAVAGIGATVVAVLMVASLARPDRRAVSAVAATPTTVLVEGHVAVAIPTGWPTQRVI 296 Query 287 SGPGSARVQVTSPADPEVALHVTQSPVPGETLPGTAQRLKRAIDASPAGVFVDFNPSDIR 346 GPGS RVQ+TSPADPEVALHVTQSPVPGETL GTA+RLKRAIDA PAGVFVDF+PS + Sbjct 297 GGPGSTRVQITSPADPEVALHVTQSPVPGETLAGTAERLKRAIDAEPAGVFVDFDPSGVS 356 Query 347 AGRPAVTYREVRAGHQVRWTILLDGAVRISVGCQSGPGHEDLLREVCAQAVRSVHAV 403 AGRPAVTYREVR GH VRWT++LD AVRIS+GCQS G +++REVC +AVRS HAV Sbjct 357 AGRPAVTYREVRTGHDVRWTVVLDTAVRISIGCQSRTGAAEVIREVCERAVRSAHAV 413 >gi|118616636|ref|YP_904968.1| hypothetical protein MUL_0861 [Mycobacterium ulcerans Agy99] gi|118568746|gb|ABL03497.1| conserved hypothetical protein [Mycobacterium ulcerans Agy99] Length=414 Score = 363 bits (932), Expect = 3e-98, Method: Compositional matrix adjust. Identities = 232/417 (56%), Positives = 279/417 (67%), Gaps = 18/417 (4%) Query 1 VSPHRAVIEAGPGAIRRLCCGADVVADTAVSAAALAAIDDQVALLDERPVAVDSLWFDAL 60 ++ HRA+IEAGP AIRRLCCG + VAD V AAALAAIDD VAL+ +RPV V SLW L Sbjct 1 MNAHRAMIEAGPQAIRRLCCGTETVADIEVCAAALAAIDDPVALVGDRPVQVWSLWSTTL 60 Query 61 RSVAVDHRDGPVVVHPSWWSAARVEVVTAAARTLTRD-----------VVVHPRSWLLRQ 109 R +A HR G +VVHPSWWSAARV VVT AAR + V + PRSWLLR+ Sbjct 61 RRLAEGHRAGMIVVHPSWWSAARVAVVTRAARAAGDEADDTHVDRAAQVWLRPRSWLLRR 120 Query 110 ASSGVSAATVVVEIAERLVLVAGAEVAAVARRTDAESVAGQVGSVIARMTRGITAVVLID 169 ++ ATVVVEI +RLV V G AV RR + E A +V + + MT GI V+ID Sbjct 121 TTT---EATVVVEIVDRLVAVVGEHRTAVPRRAEPERTAEEVAAAVDAMTPGIRTAVVID 177 Query 170 VPSTVAGAAALAAAIAGAVRGTGSSVVEIDGVRLARLARAAL--PPSDEPADPAARPATR 227 P V GA+ L A+I A+ G G + +++ RL LAR+A P P R TR Sbjct 178 APGAVVGASELGASICAALVG-GQRIAQVNDPRLIGLARSATTEPVLGSAPAPPHRSITR 236 Query 228 SRVPTLARVAAAGVALALLAPAAVV-RHGATTLQRPPTTLLVEGRVALTIPADWSTQRVV 286 P +A + A VA+ ++A A R + + PTT+LVEG VA+ IP W TQRV+ Sbjct 237 LAGPAVAGIGATVVAVLMVAGLARPDRRAVSAVAATPTTVLVEGYVAVAIPTGWPTQRVI 296 Query 287 SGPGSARVQVTSPADPEVALHVTQSPVPGETLPGTAQRLKRAIDASPAGVFVDFNPSDIR 346 GPGS RVQ+TSPADPEVALHVTQSPVPGETL GTA+RLKRAIDA PAGVFVDF+PS + Sbjct 297 GGPGSMRVQITSPADPEVALHVTQSPVPGETLAGTAERLKRAIDAEPAGVFVDFDPSGVS 356 Query 347 AGRPAVTYREVRAGHQVRWTILLDGAVRISVGCQSGPGHEDLLREVCAQAVRSVHAV 403 AGRPAVTYREVR GH VRWT++LD AVRIS+GCQS G + + EVC +AVRS HAV Sbjct 357 AGRPAVTYREVRTGHDVRWTVVLDTAVRISIGCQSRTGAAEAIGEVCERAVRSAHAV 413 >gi|342861879|ref|ZP_08718524.1| hypothetical protein MCOL_23435 [Mycobacterium colombiense CECT 3035] gi|342130696|gb|EGT84000.1| hypothetical protein MCOL_23435 [Mycobacterium colombiense CECT 3035] Length=413 Score = 353 bits (905), Expect = 4e-95, Method: Compositional matrix adjust. Identities = 229/418 (55%), Positives = 279/418 (67%), Gaps = 19/418 (4%) Query 1 VSPHRAVIEAGPGAIRRLCCGADVVADTAVSA---AALAAIDDQVALLDERPVAVDSLWF 57 +S H A+IEAGPG IRRLCC V D ++ AAL A+DD VAL+ +RP+AVD+LW Sbjct 1 MSEHPAIIEAGPGTIRRLCCATSGVDDDEMADIVRAALDAVDDPVALVGDRPLAVDALWE 60 Query 58 DALRSVAVDHRDGPVVVHPSWWSAARVEVVTAAARTLTRDVVVHPRSWLLRQASSGVSAA 117 ALRS + HRDG +VVHPSWWSA+RV VV+AAA + H RS LL +ASS A Sbjct 61 TALRSASRGHRDGTIVVHPSWWSASRVGVVSAAAAAVAGRT--HTRSSLLMRASSAAPDA 118 Query 118 TVVVEIAERLVLVAGAEVAAVARRTDAESVAGQVGSVIARMTRGITAVVLIDVPSTVAGA 177 TVVVEIAERLV + G V A+ R + VA V V+A VLID PS V GA Sbjct 119 TVVVEIAERLVAITGGGVTAIPRTAEPPCVARDVADVVAATA---PETVLIDTPSGVGGA 175 Query 178 AALAAAIAGAVRGTGSSVVE---IDGVRLARLARAALPPSDEPADPAARPATRS---RVP 231 + L I AVRG G + E ++ +RLAR+AR+A P + +P+ AA +R R Sbjct 176 SELGRLITEAVRGAGQPISETLLVNDIRLARVARSAYPAAPQPSAAAAIAPSREGRMRGR 235 Query 232 TLARVAAAGVALALLAPAAVV--RHGATT---LQRPPTTLLVEGRVALTIPADWSTQRVV 286 L+ + AA + +A +P AV R G ++ PTT LVEGRVAL++PA WS+QRVV Sbjct 236 MLSGLGAAAIVVAAASPTAVTMGRSGRVVPKPVETAPTTFLVEGRVALSVPATWSSQRVV 295 Query 287 SGPGSARVQVTSPADPEVALHVTQSPVPGETLPGTAQRLKRAIDASPAGVFVDFNPSDIR 346 GPGSARVQVTSP DP++ALH+TQSPV GETL GTA+ LKRAIDA GVFVDFNPS Sbjct 296 GGPGSARVQVTSPTDPDLALHITQSPVAGETLSGTAELLKRAIDAEAPGVFVDFNPSATS 355 Query 347 AGRPAVTYREVRAGHQVRWTILLDGAVRISVGCQSGPGHEDLLREVCAQAVRSVHAVG 404 AGRPAVTYREVR GH VRWT+L+DG VRIS+GCQS G E + + C QAVRS HA+G Sbjct 356 AGRPAVTYREVRPGHHVRWTVLVDGPVRISIGCQSRAGDEGAVTDACEQAVRSAHAIG 413 >gi|240167795|ref|ZP_04746454.1| hypothetical protein MkanA1_00665 [Mycobacterium kansasii ATCC 12478] Length=414 Score = 350 bits (899), Expect = 2e-94, Method: Compositional matrix adjust. Identities = 246/410 (60%), Positives = 290/410 (71%), Gaps = 7/410 (1%) Query 1 VSPHRAVIEAGPGAIRRLCCGADVVADTAVSAAALAAIDDQVALLDERPVAVDSLWFDAL 60 +S H VIEAGPGAIRRLCC A V+ DT V AAAL AIDD VAL+ ERPVAV +LW L Sbjct 6 MSTHPVVIEAGPGAIRRLCCDAGVLTDTEVRAAALDAIDDPVALVAERPVAVAALWSATL 65 Query 61 RSVAVDHRDGPVVVHPSWWSAARVEVVTAAARTLTR-DVVVHPRSWLLRQASSGVSAATV 119 R +A DH G VVVHPSWW ARV VVT AAR + D+VV PRSWLL +A++ V+A Sbjct 66 RRLACDHGHGMVVVHPSWWPVARVGVVTRAARAVAAGDLVVRPRSWLLTRAAAEVAAEVA 125 Query 120 VVE----IAERLVLVAGAEV-AAVARRTDAESVAGQVGSVIARMTRGITAVVLIDVPSTV 174 IA+ LV V ++V AV R VA +V V+A MTRG A V+IDVP T+ Sbjct 126 AEAVVVEIADGLVAVVDSDVMTAVPRLAKDRVVADEVAGVVAGMTRGTGAAVVIDVPGTI 185 Query 175 AGAAALAAAIAGAVRGTGSSVVEIDGVRLARLARAALPPSDEPADPAARPATRSRVPTLA 234 AGAAALA AIAGA+RG +V E+D RL+RLA+ P+D + R +R A Sbjct 186 AGAAALATAIAGALRGR-QAVAEVDDARLSRLAKEVPEKPTGPSDGSPRVERGARAGRFA 244 Query 235 RVAAAGVALALLAPAAVVRHGATTLQRPPTTLLVEGRVALTIPADWSTQRVVSGPGSARV 294 +AAAGVAL +L AA HGAT + PTT LVEGRVAL PA W TQRV+ GPGSARV Sbjct 245 GLAAAGVALTVLVVAATAHHGATAVPVAPTTFLVEGRVALIAPAGWPTQRVIGGPGSARV 304 Query 295 QVTSPADPEVALHVTQSPVPGETLPGTAQRLKRAIDASPAGVFVDFNPSDIRAGRPAVTY 354 Q+TSP DPEVALH+TQS VPGETL T +RL+RA+DA PAGVFVDFNPS + AGRP+VTY Sbjct 305 QLTSPTDPEVALHITQSQVPGETLTQTVERLRRAVDAEPAGVFVDFNPSGVSAGRPSVTY 364 Query 355 REVRAGHQVRWTILLDGAVRISVGCQSGPGHEDLLREVCAQAVRSVHAVG 404 RE+RAGH V WT+LLDG VRIS+GCQS PG +D +R+VC +AVRS HAVG Sbjct 365 RELRAGHDVWWTVLLDGGVRISIGCQSRPGAQDAVRDVCERAVRSAHAVG 414 >gi|41410340|ref|NP_963176.1| hypothetical protein MAP4242 [Mycobacterium avium subsp. paratuberculosis K-10] gi|41399174|gb|AAS06792.1| hypothetical protein MAP_4242 [Mycobacterium avium subsp. paratuberculosis K-10] gi|336460695|gb|EGO39585.1| type VII secretion-associated protein, Rv3446c family [Mycobacterium avium subsp. paratuberculosis S397] Length=405 Score = 342 bits (878), Expect = 5e-92, Method: Compositional matrix adjust. Identities = 232/412 (57%), Positives = 273/412 (67%), Gaps = 15/412 (3%) Query 1 VSPHRAVIEAGPGAIRRLCCGADVVADTAVSAAALAAIDDQVALLDERPVAVDSLWFDAL 60 +SPHRAV+E GP IRRLCCG + AD V AAL AIDD VAL+ ERPVAV++LW AL Sbjct 1 MSPHRAVVETGPATIRRLCCGTRMPADREVIEAALDAIDDPVALVGERPVAVEALWKTAL 60 Query 61 RSVAVDHRDGPVVVHPSWWSAARVEVVTAAARTLTRDVVVHPRSWLLRQASSGVSAATVV 120 RS A DG VVV+PSWW ARV V+AAA TL + PRSWLL +AS TVV Sbjct 61 RS-ACCACDGAVVVYPSWWPPARVRTVSAAAATLAGEARARPRSWLLARASRAAPEGTVV 119 Query 121 VEIAERLVLVAG---AEVAAVARRTDAESVAGQVGSVIARMTRGITAVVLIDVPSTVAGA 177 VE+AER+V + G A V AV R SVA V +A + AVVLID+P +AGA Sbjct 120 VEVAERVVAICGPAPASVTAVPRTAPPRSVADGVARAVASLA---PAVVLIDLPDPIAGA 176 Query 178 AALAAAIAGAVRG-TGSSVVEIDGVRLARLARAALPPSDEPADP---AARPA-TRSRVPT 232 A L IA A+RG + +V I+ +RLARLA +A D PA P AA PA +R R+ + Sbjct 177 AELGPLIADALRGRIRAEMVHINDIRLARLACSASDGDDAPAGPDRSAAAPARSRPRILS 236 Query 233 LARVAAAGVALALLAPAAVVRHGATTLQRPPTTLLVEGRVALTIPADWSTQRVVSGPGSA 292 AA A A A + P T LVEGRVAL++P DW TQR+V GPGSA Sbjct 237 GLGAAAVIAAAAAPLAITAAPDRARPM---PGTSLVEGRVALSVPNDWPTQRLVGGPGSA 293 Query 293 RVQVTSPADPEVALHVTQSPVPGETLPGTAQRLKRAIDASPAGVFVDFNPSDIRAGRPAV 352 RVQVTSP DPEVALH+TQSPV GETL TA+RLK+AIDA+PAGVFVDF+P+ GRPAV Sbjct 294 RVQVTSPTDPEVALHITQSPVVGETLGDTARRLKQAIDAAPAGVFVDFDPTATSVGRPAV 353 Query 353 TYREVRAGHQVRWTILLDGAVRISVGCQSGPGHEDLLREVCAQAVRSVHAVG 404 TYRE+R HQVRWT+LLDG VRIS+GCQS PG E +RE C AV S HA+G Sbjct 354 TYREIRPAHQVRWTVLLDGPVRISIGCQSRPGAEQAVREACELAVGSAHAIG 405 >gi|289449151|ref|ZP_06438895.1| hypothetical alanine and valine rich protein [Mycobacterium tuberculosis CPHL_A] gi|289422109|gb|EFD19310.1| hypothetical alanine and valine rich protein [Mycobacterium tuberculosis CPHL_A] Length=192 Score = 328 bits (841), Expect = 1e-87, Method: Compositional matrix adjust. Identities = 176/177 (99%), Positives = 177/177 (100%), Gaps = 0/177 (0%) Query 1 VSPHRAVIEAGPGAIRRLCCGADVVADTAVSAAALAAIDDQVALLDERPVAVDSLWFDAL 60 +SPHRAVIEAGPGAIRRLCCGADVVADTAVSAAALAAIDDQVALLDERPVAVDSLWFDAL Sbjct 1 MSPHRAVIEAGPGAIRRLCCGADVVADTAVSAAALAAIDDQVALLDERPVAVDSLWFDAL 60 Query 61 RSVAVDHRDGPVVVHPSWWSAARVEVVTAAARTLTRDVVVHPRSWLLRQASSGVSAATVV 120 RSVAVDHRDGPVVVHPSWWSAARVEVVTAAARTLTRDVVVHPRSWLLRQASSGVSAATVV Sbjct 61 RSVAVDHRDGPVVVHPSWWSAARVEVVTAAARTLTRDVVVHPRSWLLRQASSGVSAATVV 120 Query 121 VEIAERLVLVAGAEVAAVARRTDAESVAGQVGSVIARMTRGITAVVLIDVPSTVAGA 177 VEIAERLVLVAGAEVAAVARRTDAESVAGQVGSVIARMTRGITAVVLIDVPSTVAGA Sbjct 121 VEIAERLVLVAGAEVAAVARRTDAESVAGQVGSVIARMTRGITAVVLIDVPSTVAGA 177 >gi|254776819|ref|ZP_05218335.1| hypothetical protein MaviaA2_19431 [Mycobacterium avium subsp. avium ATCC 25291] Length=376 Score = 305 bits (782), Expect = 7e-81, Method: Compositional matrix adjust. Identities = 215/379 (57%), Positives = 251/379 (67%), Gaps = 13/379 (3%) Query 33 AALAAIDDQVALLDERPVAVDSLWFDALRSVAVDHRDGPVVVHPSWWSAARVEVVTAAAR 92 AAL AIDD VAL+ ERPVAV++LW ALRS A DG VVVHPSWW ARV V+AAA Sbjct 4 AALDAIDDPVALVGERPVAVEALWKTALRS-ACCACDGAVVVHPSWWPPARVRTVSAAAA 62 Query 93 TLTRDVVVHPRSWLLRQASSGVSAATVVVEIAERLVLV---AGAEVAAVARRTDAESVAG 149 TL + PRSWLL +AS TVVVE+AER+V + A A V AV R SVA Sbjct 63 TLAGEARARPRSWLLARASRAAPEDTVVVEVAERVVAICKPAPASVTAVPRTAPPRSVAD 122 Query 150 QVGSVIARMTRGITAVVLIDVPSTVAGAAALAAAIAGAVRG-TGSSVVEIDGVRLARLAR 208 V +A + AVVLID+P +AGAA L IA A+RG + +V I+ +RLARLA Sbjct 123 GVARAVASLA---PAVVLIDLPDPIAGAAELGPLIADALRGRIRAEMVHINDIRLARLAC 179 Query 209 AALPPSDEPADP---AARPATRSRVPTLARVAAAGVALALLAPAAVVRHGATTLQRPPTT 265 +A D PA P AA PA RSR P L A +A A + + P Sbjct 180 SASDGDDAPAGPDRSAAAPA-RSR-PRLLSGLGAAAVIAAAAAPLAITAAPDRARPMPGA 237 Query 266 LLVEGRVALTIPADWSTQRVVSGPGSARVQVTSPADPEVALHVTQSPVPGETLPGTAQRL 325 LVEGRVAL++P DW TQR+V GPGSARVQVTSP DPEVALH+TQSPV GETL TA+RL Sbjct 238 SLVEGRVALSVPNDWPTQRLVGGPGSARVQVTSPTDPEVALHITQSPVVGETLGDTARRL 297 Query 326 KRAIDASPAGVFVDFNPSDIRAGRPAVTYREVRAGHQVRWTILLDGAVRISVGCQSGPGH 385 K+AIDA+PAGVFVDF+P+ GRPAVTYRE+R HQVRWT+LLDG VRIS+GCQS PG Sbjct 298 KQAIDAAPAGVFVDFDPTATSVGRPAVTYREIRPAHQVRWTVLLDGPVRISIGCQSRPGA 357 Query 386 EDLLREVCAQAVRSVHAVG 404 E +RE C AVRS HA+G Sbjct 358 EHAVREACELAVRSAHAIG 376 >gi|118465986|ref|YP_883524.1| hypothetical protein MAV_4389 [Mycobacterium avium 104] gi|118167273|gb|ABK68170.1| conserved hypothetical protein [Mycobacterium avium 104] Length=376 Score = 301 bits (771), Expect = 1e-79, Method: Compositional matrix adjust. Identities = 211/378 (56%), Positives = 248/378 (66%), Gaps = 11/378 (2%) Query 33 AALAAIDDQVALLDERPVAVDSLWFDALRSVAVDHRDGPVVVHPSWWSAARVEVVTAAAR 92 AAL AIDD VAL+ ERPVAV++LW ALRS A DG VVVHPSWW ARV V+AAA Sbjct 4 AALDAIDDPVALVGERPVAVEALWKTALRS-ACCACDGAVVVHPSWWPPARVRTVSAAAA 62 Query 93 TLTRDVVVHPRSWLLRQASSGVSAATVVVEIAERLVLV---AGAEVAAVARRTDAESVAG 149 TL + PRSWLL +AS TVVVE+AER+V + A A V AV R SVA Sbjct 63 TLAGEARARPRSWLLARASRAAPEDTVVVEVAERVVAICKPAPATVTAVPRTAPPRSVAD 122 Query 150 QVGSVIARMTRGITAVVLIDVPSTVAGAAALAAAIAGAVRG-TGSSVVEIDGVRLARLAR 208 V +A + AVVLID+P +AGAA L IA A+RG + +V I+ +RLARLA Sbjct 123 GVARAVASLA---PAVVLIDLPDPIAGAAELGPLIADALRGRIRAEMVHINDIRLARLAC 179 Query 209 AALPPSDEPA--DPAARPATRSRVPTLARVAAAGVALALLAPAAVVRHGATTLQRPPTTL 266 +A D PA D +A RSR P L A +A A + + P Sbjct 180 SASDGDDAPAGADRSAAAPARSR-PRLLSGLGAAAVIAAAAAPLAITAAPDRARPMPGAS 238 Query 267 LVEGRVALTIPADWSTQRVVSGPGSARVQVTSPADPEVALHVTQSPVPGETLPGTAQRLK 326 LVEGRVAL++P DW TQR+V GPGSARVQVTSP DPEVALH+TQSPV GETL TA+RLK Sbjct 239 LVEGRVALSVPNDWPTQRLVGGPGSARVQVTSPTDPEVALHITQSPVVGETLGDTARRLK 298 Query 327 RAIDASPAGVFVDFNPSDIRAGRPAVTYREVRAGHQVRWTILLDGAVRISVGCQSGPGHE 386 +AIDA+PAGVFVDF+P+ GRPAVTYRE+R HQVRW +LLDG VRIS+GCQS PG E Sbjct 299 QAIDAAPAGVFVDFDPTATSVGRPAVTYREIRPAHQVRWAVLLDGPVRISIGCQSRPGAE 358 Query 387 DLLREVCAQAVRSVHAVG 404 +RE C AVRS HA+G Sbjct 359 QAVREACELAVRSAHAIG 376 >gi|296165842|ref|ZP_06848332.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295898798|gb|EFG78314.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length=176 Score = 223 bits (568), Expect = 4e-56, Method: Compositional matrix adjust. Identities = 110/141 (79%), Positives = 121/141 (86%), Gaps = 0/141 (0%) Query 264 TTLLVEGRVALTIPADWSTQRVVSGPGSARVQVTSPADPEVALHVTQSPVPGETLPGTAQ 323 TT LVEGRVA+T+PADW TQRV++GPGSARVQ+TSPADPEVALHVTQSP GETL G A+ Sbjct 36 TTFLVEGRVAVTVPADWPTQRVLAGPGSARVQITSPADPEVALHVTQSPAAGETLGGAAE 95 Query 324 RLKRAIDASPAGVFVDFNPSDIRAGRPAVTYREVRAGHQVRWTILLDGAVRISVGCQSGP 383 RLKRAI A PAGVFVDFNP+ AGRPAVTYREVR GHQVRWT+LLDG VRIS+GCQS P Sbjct 96 RLKRAIGAEPAGVFVDFNPAGTSAGRPAVTYREVRPGHQVRWTVLLDGPVRISLGCQSRP 155 Query 384 GHEDLLREVCAQAVRSVHAVG 404 G ED +R C +AVRS HAVG Sbjct 156 GGEDAVRVACERAVRSAHAVG 176 >gi|333991912|ref|YP_004524526.1| hypothetical protein JDM601_3272 [Mycobacterium sp. JDM601] gi|333487880|gb|AEF37272.1| conserved hypothetical protein [Mycobacterium sp. JDM601] Length=394 Score = 219 bits (557), Expect = 9e-55, Method: Compositional matrix adjust. Identities = 176/408 (44%), Positives = 221/408 (55%), Gaps = 30/408 (7%) Query 4 HRAVIEAGPGAIRRLCCGADVVADTAVSAAALAAIDDQVALLDERPVAVDSLWFDALRSV 63 HRA+IEAGP +RRLCC AD +AAAL ID+ AL+D RPV V L LRSV Sbjct 3 HRAIIEAGPATMRRLCCSTGESAD---AAAALEWIDEPFALVDGRPVEVPEL----LRSV 55 Query 64 -----AVDHRDGPVVVHPSWWSAARVEVVTAAARTLTRDVVVHPRSWLLRQASSGVSAAT 118 AV+ V+VHPSWW RVE++T AAR LT D+V RS L + + Sbjct 56 LACPSAVESM---VIVHPSWWPVRRVELLTTAARGLTEDIVTVARSRPLFDTFAAAAVVE 112 Query 119 VVVEIAERLVLVAGAEVAAVARRTDAESVAGQVGSVIARMTRGITAVVLIDVPSTVAGAA 178 + + V A + A R + VA V + A V+ID P+ V GA Sbjct 113 IAAALV----AVTAAGITAEPRIGPPDEVAAAVARRVLAACPDPGATVVIDAPAGVGGAG 168 Query 179 ALAAAIAGAVRGTGSSVVEIDGVRLARLARAALPPSDEPADPAARPATRSRVPTLARVAA 238 ALA IA + + VV + + +A A PP P AR R R+P A Sbjct 169 ALATMIADRL-PSSMQVVVVHELPNDGIAEPAAPP--RPCLAPARRVGRRRLPAAVAAAL 225 Query 239 AGVALALLAPAAVVRHGATTLQRPPTTLLVEGRVALTIPADWSTQRVVSGPGSARVQVTS 298 VA + A H + P LVEGRV + +PA W +RV +GPGSARV+VTS Sbjct 226 CVVAWGMHA-----HHDRSPAPGTPAAYLVEGRVTVQVPAGWPVRRVAAGPGSARVEVTS 280 Query 299 PADPEVALHVTQSPVPGETLPGTAQRLKRAI---DASPAGVFVDFNPSDIRAGRPAVTYR 355 P DP + LHVTQ+P G+TL A+ L+R + D GVFV F+P+ AGRPAVTYR Sbjct 281 PTDPRLVLHVTQAPAAGDTLAAVAEPLQRGLQLADTETPGVFVGFDPAGSSAGRPAVTYR 340 Query 356 EVRAGHQVRWTILLDGAVRISVGCQSGPGHEDLLREVCAQAVRSVHAV 403 EVR H V W +L+D AVRI +GCQSGPG +D LR C QAVRS HA+ Sbjct 341 EVRDDHHVDWAVLVDRAVRIGIGCQSGPGGDDALRPACEQAVRSAHAL 388 >gi|254821782|ref|ZP_05226783.1| hypothetical protein MintA_17752 [Mycobacterium intracellulare ATCC 13950] Length=133 Score = 207 bits (528), Expect = 2e-51, Method: Compositional matrix adjust. Identities = 100/133 (76%), Positives = 115/133 (87%), Gaps = 0/133 (0%) Query 272 VALTIPADWSTQRVVSGPGSARVQVTSPADPEVALHVTQSPVPGETLPGTAQRLKRAIDA 331 +AL++PA W T+RVV+GPGSARVQVTSP+DPEVALH+TQSPV GETL GTA+RLKRAIDA Sbjct 1 MALSVPATWPTRRVVTGPGSARVQVTSPSDPEVALHITQSPVAGETLSGTAERLKRAIDA 60 Query 332 SPAGVFVDFNPSDIRAGRPAVTYREVRAGHQVRWTILLDGAVRISVGCQSGPGHEDLLRE 391 PAG+FVDFNPS AGR AVTYREVR GH+VRWT+LLDG VRISVGCQS PG + +R+ Sbjct 61 EPAGLFVDFNPSGTSAGRSAVTYREVRPGHEVRWTVLLDGPVRISVGCQSRPGDQGGVRD 120 Query 392 VCAQAVRSVHAVG 404 C QAVRS HA+G Sbjct 121 ACEQAVRSAHAIG 133 >gi|120402472|ref|YP_952301.1| hypothetical protein Mvan_1463 [Mycobacterium vanbaalenii PYR-1] gi|119955290|gb|ABM12295.1| conserved hypothetical alanine and valine rich protein [Mycobacterium vanbaalenii PYR-1] Length=369 Score = 199 bits (505), Expect = 8e-49, Method: Compositional matrix adjust. Identities = 163/403 (41%), Positives = 211/403 (53%), Gaps = 44/403 (10%) Query 7 VIEAGPGAIRRLCCGADVVADTAVSAAALAAIDDQVALLDERPVAVDSLWFDALRSVAVD 66 V+E GP +R G + VS A L IDD +ALLDERPV V LW D L VA Sbjct 4 VVEVGPCTVR----GTEAAPPEWVSVA-LDCIDDPLALLDERPVEVSGLWRDVLAVVAGG 58 Query 67 HRDGPVVVHPSWWSAARVEVVTAAARTLTRDVVVHPRSWLLRQASSGVSAATVVVEIAER 126 H V+V P+WW + R +VV AA R +T +VVV L R + SG A +VE++ Sbjct 59 HDGALVLVVPTWWPSGRADVVAAAGRAMTPEVVV-----LQRSSLSGDDGAGTLVELSAD 113 Query 127 LVLVAGAEVAAVARRTDAESVAGQVGSVIARMTRGITAVVLIDVPSTVAGAAALAAAIAG 186 +V + D +G ++ T VLIDVP AG A L A+ Sbjct 114 FAVVRSPGTGCLVVPRD------DIGPLLETATS-----VLIDVP---AGVAPLPPAVCA 159 Query 187 AVRGTGSSVVEID--GVRLARLARAALPPSDEPADPAARPATRSRVPTLARVAAAGVALA 244 +R G+ V D GVR A LA A P P +A A Sbjct 160 RLRQLGTPVSHRDHTGVRDAALA----------ALPRPGRRPGRPRPGGGAIAVLAGAAV 209 Query 245 LLAPAAVVRHGATTLQRPP----TTLLVEGRVALTIPADWSTQRVVSGPGSARVQVTSPA 300 A RPP T LLVEGRVA+ +PA W+ +RV +GPGSARV+V++ A Sbjct 210 TAVAAGGGWAAQNLSPRPPADPATRLLVEGRVAVAVPAQWTDERVTTGPGSARVRVSA-A 268 Query 301 DPEVALHVTQSPVPGETLPGTAQRLKRAIDASPAGVFVDFNPSDIRAGRPAVTYREVRAG 360 ALH+TQS G T A+ L+RAI + P GVFVDF+PS R GRPAVTY E RAG Sbjct 269 GGSPALHITQSV--GSTA-DVAESLRRAIGSEPVGVFVDFDPSGERGGRPAVTYVERRAG 325 Query 361 HQVRWTILLDGAVRISVGCQSGPGHEDLLREVCAQAVRSVHAV 403 + RW+++ DG +RI++GCQS PG + + +VCA+AVR+ HAV Sbjct 326 SETRWSVVTDGDLRIAIGCQSTPGLDAAVEDVCAEAVRTAHAV 368 >gi|126433757|ref|YP_001069448.1| hypothetical protein Mjls_1154 [Mycobacterium sp. JLS] gi|126233557|gb|ABN96957.1| conserved hypothetical alanine and valine rich protein [Mycobacterium sp. JLS] Length=372 Score = 185 bits (469), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 152/378 (41%), Positives = 193/378 (52%), Gaps = 25/378 (6%) Query 27 DTAVSAAALAAIDDQVALLDERPVAVDSLWFDALRSVAVDHRDGPVVVHPSWWSAARVEV 86 D ++ AA+ +IDD + L+++ PV V ++ D LRS D VVHP WWS RV+ Sbjct 8 DDELATAAIESIDDTLMLVEDGPVRVRAVMTDLLRSAVGPGADELAVVHPGWWSRRRVQA 67 Query 87 VTAAARTLTRDVVVHPRSWLLRQASSGVSAATVVVEIAERLVLVAGAEVAAVARRTDAES 146 V AA + V R+ L G A VVEIA V V A + + R +D Sbjct 68 VLDAAGDICGAAVAVTRAEAL---GGGYDA---VVEIAAEHVAVTAARICTLTRTSDDAV 121 Query 147 VAGQVGSVIARMTRGITAVVLIDVPSTVAGAAALAAAIAGAVRGTGSSVVEIDGVRLARL 206 A V + G V++D P V G+A A A A+R TG +V Sbjct 122 CAAVVREI------GHAQTVVVDAPPGVGGSALATAIAA-ALRRTGVTVTP--------- 165 Query 207 ARAALPPSDEPADPAARPATRSRVPTLARVAAAGVALALLAPAAVVRHGATTLQRPPTTL 266 AA P P A P R V A + A AAVV H P+TL Sbjct 166 --AATQVVQIPTRPVAAPPPRRSGRRAIPVLAGALVAAAGVGAAVVTHEPAPPPAEPSTL 223 Query 267 LVEGRVALTIPADWSTQRVVSGPGSARVQVTSPADPEVALHVTQSPVP-GETLPGTAQRL 325 LVEGR A+ +PA W+ +R+ G GSARVQ+TSPADP VALHVTQSP+P ++L L Sbjct 224 LVEGRAAVVVPALWTVRRITDGGGSARVQITSPADPAVALHVTQSPLPRAQSLGEVGDTL 283 Query 326 KRAIDASPAGVFVDFNPSDIRAGRPAVTYREVRAGHQVRWTILLDGAVRISVGCQSGPGH 385 A++A P GVF DF+ D R GR VTYRE RA HQ W +L+D +RI +GCQS PG Sbjct 284 LGALEAQPPGVFTDFHARDERGGRAVVTYRERRARHQTDWVVLVDDTLRIGIGCQSPPGR 343 Query 386 EDLLREVCAQAVRSVHAV 403 D +R C AV S HAV Sbjct 344 TDAVRSACDAAVHSAHAV 361 >gi|169630834|ref|YP_001704483.1| hypothetical protein MAB_3755c [Mycobacterium abscessus ATCC 19977] gi|169242801|emb|CAM63829.1| Conserved hypothetical protein [Mycobacterium abscessus] Length=457 Score = 177 bits (448), Expect = 4e-42, Method: Compositional matrix adjust. Identities = 153/417 (37%), Positives = 214/417 (52%), Gaps = 49/417 (11%) Query 33 AALAAIDDQVALLDERPVAVDSLWFDALRSVAVDHR-----DGPVVVHPSWWSAARVEVV 87 +A+AA+DD +ALL R V +LW S+ D D V++HP+ W AR ++ Sbjct 40 SAVAALDDDMALLPGRVVPSRALWAALFESLLTDRNAPVRLDSLVLIHPTTWGPARRTLL 99 Query 88 TAAARTLTRDVVVHPRSWLLRQASSGVSA-----ATVVVEIAERLVLVA------GAEVA 136 ++AAR + + V R++ L A GV A + VVVE++ + V VA E A Sbjct 100 SSAARMMAATLTVRSRAFAL--AERGVRADLSGRSLVVVEVSPKEVAVAVVGPGSDGEPA 157 Query 137 AVARRTDAES--------VAGQVGSVIARMTRGI---TAVVLIDVPSTVAGAAALAAAIA 185 A R + S VA VG + R+ R A +L+D G A + AI Sbjct 158 ATVRHLEDRSWETRSAADVARAVGCAVERVVRDERPGVAAILVDSADKDMGEA-IVDAID 216 Query 186 GAVRGTGSSVVEIDGV--RLARLARAALPPSDEPADP-AARPAT--------RS--RVPT 232 G S V +D V + + AR + +P A RP + RS R+P Sbjct 217 RIGLTPGVSQVAVDSVFREMGQAARTSAFLDQGVVEPVATRPVSAWTPGAPARSTPRLPR 276 Query 233 LARVAAAGVALALLAPAAVVRHGATTLQRPP----TTLLVEGRVALTIPADWSTQRV-VS 287 AA G+A A++ V+ +T ++P T+LLVEGRV L +PA+W+ +R+ Sbjct 277 WWPPAAIGLAAAIVVTGVVLTVASTRSRQPAPAIATSLLVEGRVQLMVPAEWAVRRIPAG 336 Query 288 GPGSARVQVTSPADPEVALHVTQSPV-PGETLPGTAQRLKRAIDASPAGVFVDFNPSDIR 346 G GSARV+V SPADPE +HVTQ V P ETL TA+ L+ A++ P G F DF D + Sbjct 337 GAGSARVEVISPADPEAVVHVTQVRVKPAETLAATAETLRAAMEKEPQGAFSDFRADDRK 396 Query 347 AGRPAVTYREVRAGHQVRWTILLDGAVRISVGCQSGPGHEDLLREVCAQAVRSVHAV 403 RPAVTY EVR GH + WT+LLDG +RI VGCQ +R+ C A+ + HAV Sbjct 397 MDRPAVTYTEVREGHDIAWTVLLDGDLRIGVGCQFKKDSYADVRQACELAIHTAHAV 453 >gi|108798099|ref|YP_638296.1| hypothetical protein Mmcs_1127 [Mycobacterium sp. MCS] gi|119867195|ref|YP_937147.1| hypothetical protein Mkms_1144 [Mycobacterium sp. KMS] gi|108768518|gb|ABG07240.1| conserved hypothetical alanine and valine rich protein [Mycobacterium sp. MCS] gi|119693284|gb|ABL90357.1| conserved hypothetical alanine and valine rich protein [Mycobacterium sp. KMS] Length=362 Score = 175 bits (444), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 152/375 (41%), Positives = 195/375 (52%), Gaps = 25/375 (6%) Query 30 VSAAALAAIDDQVALLDERPVAVDSLWFDALRSVAVDHRDGPVVVHPSWWSAARVEVVTA 89 ++ AA+ +IDD + L+++ PV V ++ D LRS D VVHPSWWS RV+ V Sbjct 1 MATAAIESIDDTLMLVEDGPVRVRAVMTDLLRSAVGPGADELAVVHPSWWSRRRVQAVLD 60 Query 90 AARTLTRDVVVHPRSWLLRQASSGVSAATVVVEIAERLVLVAGAEVAAVARRTDAESVAG 149 AA + V R+ L G A VVEIA V V A + + R +D A Sbjct 61 AAGDICGAAVAVTRAEAL---GGGYDA---VVEIAAEHVAVTAARICTLTRTSDDAVCAA 114 Query 150 QVGSVIARMTRGITAVVLIDVPSTVAGAAALAAAIAGAVRGTGSSVVEIDGVRLARLARA 209 V + G V++D P V G ALA AIA A+R G +V + Sbjct 115 VVREI------GHAQTVVVDAPLGV-GGTALATAIAAALRRIGVTVTPA-------ATQV 160 Query 210 ALPPSDEPADPAARPATRSRVPTLARVAAAGVALALLAPAAVVRHGATTLQRPPTTLLVE 269 P+ A P R + R +P LA A A AAV HG P+TLLVE Sbjct 161 VQVPTPPVAAPPPRRSGRRAIPVLAGALVA----AAGVGAAVATHGPAPPPAEPSTLLVE 216 Query 270 GRVALTIPADWSTQRVVSGPGSARVQVTSPADPEVALHVTQSPVP-GETLPGTAQRLKRA 328 GR + +PA W+ +R+ G GSARVQ+TSPADP VALHVTQSP+P ++L L A Sbjct 217 GRAGVVVPALWTVRRITDGGGSARVQITSPADPAVALHVTQSPLPRAQSLEEVGGTLLGA 276 Query 329 IDASPAGVFVDFNPSDIRAGRPAVTYREVRAGHQVRWTILLDGAVRISVGCQSGPGHEDL 388 ++A P GVF DF+ D R GR VTYRE RA HQ W +L+D +RI +GCQS P D Sbjct 277 LEAQPPGVFTDFHARDERGGRAVVTYRERRARHQTDWVVLVDDTLRIGIGCQSPPDRTDA 336 Query 389 LREVCAQAVRSVHAV 403 +R C AV S HAV Sbjct 337 VRSACDAAVHSAHAV 351 >gi|254819230|ref|ZP_05224231.1| hypothetical protein MintA_04851 [Mycobacterium intracellulare ATCC 13950] Length=216 Score = 164 bits (416), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 122/217 (57%), Positives = 148/217 (69%), Gaps = 11/217 (5%) Query 1 VSPHRAVIEAGPGAIRRLCCGADVV--ADTA-VSAAALAAIDDQVALLDERPVAVDSLWF 57 VS HR +IEAGPG IRRLCCG + +TA V +AL AIDD+VAL+ ERP+ VD+LW Sbjct 5 VSEHRPIIEAGPGTIRRLCCGTGTIDEGETADVIRSALDAIDDRVALVGERPLTVDALWE 64 Query 58 DALRSVAVDHRDGPVVVHPSWWSAARVEVVTAAARTLTRDVVVHPRSWLLRQASSGVSAA 117 ALR+ DG VVVHPSWWS++RV VVTAAA + V PRSWLL +AS + Sbjct 65 AALRAATCRTADGMVVVHPSWWSSSRVGVVTAAAARVAGAVRTRPRSWLLTRASR--AEP 122 Query 118 TVVVEIAERLVLVAGAEVAAVARRTDAESVAGQVGSVIARMTRGITAVVLIDVPSTVAGA 177 TV VEIAERLV+V +E+ AV R D +SVA V +VIA T A VLID PSTVAGA Sbjct 123 TVAVEIAERLVVVTASEITAVPRNADPQSVAEAVAAVIAGAT---PASVLIDTPSTVAGA 179 Query 178 AALAAAIAGAVRGTG---SSVVEIDGVRLARLARAAL 211 +ALAA+I + G+G SV+EI+ +R RLARAAL Sbjct 180 SALAASITQRLSGSGPSAPSVLEINDIRFTRLARAAL 216 >gi|315445887|ref|YP_004078766.1| hypothetical protein Mspyr1_43750 [Mycobacterium sp. Spyr1] gi|315264190|gb|ADU00932.1| hypothetical protein Mspyr1_43750 [Mycobacterium sp. Spyr1] Length=376 Score = 160 bits (404), Expect = 4e-37, Method: Compositional matrix adjust. Identities = 145/406 (36%), Positives = 201/406 (50%), Gaps = 42/406 (10%) Query 6 AVIEAGPGAIRRLCCGADVVADTAVSAAALAAIDDQVALLDERPVAVDSLWFDALRSVAV 65 AV+EAGP +R G +V D+A AAAL IDD +AL+ + PV LW D LR+ + Sbjct 4 AVVEAGPHTVR----GPGLVPDSA--AAALEFIDDPIALVGDEPVDTVELWRDVLRAASG 57 Query 66 DHRDGPVVVHPSWWSAARVEVVTAAARTLTRDVVVHPRSWLLRQASSGVSAATVVVEIAE 125 D VVV P+WW RV+V+ AAA L VV RS +L A+ V+E++ Sbjct 58 GAGDV-VVVVPTWWPGQRVDVIVAAATCLPPGTVVRHRSAVL------CGTASAVLELSA 110 Query 126 RLVLVAGAEVAAVARRTDAESVAGQVGSVIARMTRGITA------VVLIDVPSTVAGAAA 179 AV + D + V V AR T G+ A +LID P G Sbjct 111 EY---------AVLTQPDGDPV------VTARGTPGMAAQLQTSHTLLIDTPE---GVQI 152 Query 180 LAAAIAGAVRGTGSSVVEIDGVRLARLARAALPPSDEPADPAARPATRSRVPTLARVAAA 239 L+A +A +R G V R+ R A ++ P + + A Sbjct 153 LSADVAADLRRAGIPFVHSTSERMRRAAAQSVA-ERAPVEAGSSRRRGGGRAVAVVAGIA 211 Query 240 GVALALLAPAAVVRHGATTLQRPPTTLLVEGRVALTIPADWSTQRVVSGPGSARVQVTSP 299 A A A + T L+EGRVAL +PA+W+ +RV GSARV+V +P Sbjct 212 VTVTAAAGGWAAQTFSAVPRPQMATRTLIEGRVALQVPAEWTVERVTGDAGSARVRVAAP 271 Query 300 ADPEVALHVTQSPVPGETLP--GTAQRLKRAIDASPAGVFVDFNPSDIRAGRPAVTYREV 357 ALHVTQS + T+P + L+ A+ GVFVDF+ + RAGRPAVTY E Sbjct 272 GGLP-ALHVTQS-LGAATVPLAEVGESLRAALTLETDGVFVDFDAAGSRAGRPAVTYVER 329 Query 358 RAGHQVRWTILLDGAVRISVGCQSGPGHEDLLREVCAQAVRSVHAV 403 R RW +++DG +RI++GCQ PG+ D + ++CA+AV S HA+ Sbjct 330 RTATLTRWAVIVDGPLRIAIGCQHEPGNRDSVEQICAEAVGSAHAL 375 >gi|118471245|ref|YP_885919.1| hypothetical protein MSMEG_1537 [Mycobacterium smegmatis str. MC2 155] gi|118172532|gb|ABK73428.1| conserved hypothetical protein [Mycobacterium smegmatis str. MC2 155] Length=368 Score = 156 bits (395), Expect = 5e-36, Method: Compositional matrix adjust. Identities = 144/386 (38%), Positives = 195/386 (51%), Gaps = 45/386 (11%) Query 7 VIEAGPGAIRRLCCGADVVADTAVSAAALAAIDDQVALLDERPVAVDSLWFDALRSVAVD 66 VIEAGP + R + V D ++ AL IDDQ A++D+ V V+ LW R + Sbjct 7 VIEAGPVGVHRAGAESGPVPD-ELAQTALECIDDQFAIVDDHFVTVEDLW---TRVLGTG 62 Query 67 HRDGPVVVHPSWWSAARVEVVTAAARTLTRDVVVHPRSWLLRQASSGVSAATVVVEIAER 126 H VVVHP+WW+ RV + A T VV L + A+ V+EI+ Sbjct 63 HARDAVVVHPTWWTPNRVTRLRDIATTCGIGRVVSRADAL---GADATGASWTVIEISTD 119 Query 127 LVLV---AGAEVAAVARRTDAESVAGQVGSVIARMTRGITAVVLIDVPSTVAGAAALAAA 183 LV V G + E+V V + + G T V++DVP V G LA A Sbjct 120 LVSVTHNGGVPQSWTRGGHTEEAVVDAVCTAV-----GDTRDVVLDVPDDVPGGRELARA 174 Query 184 IAGAVRGTGSSVVEIDGVRLARLARAALPPSDEPA-DPAARPATRSRVPTLARVAAAGVA 242 + VR +S V++ L RA +D PA +P RP R +A VA G+ Sbjct 175 LTRRVRCRHASPVDV-------LQRAV---TDTPAREPERRP--RKVTVGVAAVAIMGMC 222 Query 243 LALLAPAAVVRHGATTLQRPP---TTLLVEGRVALTIPADWSTQRVVSGPGSARVQVTSP 299 L A +RP TT LVEGRVA+ IP W +RV GS R+QV SP Sbjct 223 TTLAA-----------HERPTDTVTTGLVEGRVAVQIPRGWRVERVTDDAGSPRLQVFSP 271 Query 300 ADPEVALHVTQSPVPGETLPGTAQRLKRAIDASPAGVFVDFNPSDIRAGRPAVTYREVRA 359 + + +H+TQSPV + A L+ A++ +PAGVFVDF+P D A RPA+TYREVRA Sbjct 272 SGTDPVIHITQSPVGAGDV---ADTLRYALEQAPAGVFVDFDPDDRIADRPAITYREVRA 328 Query 360 GHQVRWTILLDGAVRISVGCQSGPGH 385 +VRW +++DG VRI++GCQ H Sbjct 329 HREVRWAVVVDGPVRIAIGCQGREFH 354 >gi|296168733|ref|ZP_06850443.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295896570|gb|EFG76212.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length=203 Score = 156 bits (395), Expect = 6e-36, Method: Compositional matrix adjust. Identities = 113/208 (55%), Positives = 137/208 (66%), Gaps = 8/208 (3%) Query 1 VSPHRAVIEAGPGAIRRLCCGADVVADTA---VSAAALAAIDDQVALLDERPVAVDSLWF 57 ++PHRAVIEAGP IRRLCCG VVAD V AAL AIDD+VAL+ ERPVAV SLW Sbjct 1 MNPHRAVIEAGPATIRRLCCGTGVVADDETAEVVGAALDAIDDRVALVGERPVAVASLWS 60 Query 58 DALRSVAVDHRDGPVVVHPSWWSAARVEVVTAAARTLTRDVVVHPRSWLLRQASSGVSAA 117 DALRS A G VVVHPSWWS RV VV++AA T++ DV+V RSWLL + + + A Sbjct 61 DALRSAACALGRGMVVVHPSWWSPPRVTVVSSAAATVSGDVLVRTRSWLLTRDADAETDA 120 Query 118 TVVVEIAERLVLVAGAEVAAVARRTDAESVAGQVGSVIARMTRGITAVVLIDVPSTVAGA 177 TVVVEI + +V+V G A+ RR VA +V +V+A M VLID P+ GA Sbjct 121 TVVVEITDGMVVVGGTRGVAIPRRRPPHPVADEVVAVLAGMP---ADRVLIDAPA--PGA 175 Query 178 AALAAAIAGAVRGTGSSVVEIDGVRLAR 205 A +AA+IA A R G +VV +D RLAR Sbjct 176 ATIAASIADAARANGRTVVRVDDARLAR 203 >gi|145225534|ref|YP_001136212.1| hypothetical protein Mflv_4958 [Mycobacterium gilvum PYR-GCK] gi|145218020|gb|ABP47424.1| conserved hypothetical alanine and valine rich protein [Mycobacterium gilvum PYR-GCK] Length=364 Score = 152 bits (385), Expect = 8e-35, Method: Compositional matrix adjust. Identities = 138/391 (36%), Positives = 192/391 (50%), Gaps = 38/391 (9%) Query 21 GADVVADTAVSAAALAAIDDQVALLDERPVAVDSLWFDALRSVAVDHRDGPVVVHPSWWS 80 G +V D+A AAAL IDD +AL+ + PV LW D LR+ + D VVV P+WW Sbjct 3 GPGLVPDSA--AAALEFIDDPIALVGDEPVDTVELWRDVLRAASGGAGDV-VVVVPTWWP 59 Query 81 AARVEVVTAAARTLTRDVVVHPRSWLLRQASSGVSAATVVVEIAERLVLVAGAEVAAVAR 140 RV+V+ AAA L VV RS +L A+ V+E++ AV Sbjct 60 GQRVDVIVAAATCLPPGTVVRHRSAVL------CGTASAVLELSAEY---------AVLT 104 Query 141 RTDAESVAGQVGSVIARMTRGITA------VVLIDVPSTVAGAAALAAAIAGAVRGTGSS 194 + D + V V AR T G+ A +LID P G L+A +A +R G Sbjct 105 QPDGDPV------VTARGTPGMAAQLQTSHTLLIDTPE---GVQILSADVAADLRRAGIP 155 Query 195 VVEIDGVRLARLARAALPPSDEPADPAARPATRSRVPTLARVAAAGVALALLAPAAVVRH 254 V R+ R A ++ P + + A A A Sbjct 156 FVHSTSERMRRAAAQSVA-ERAPVEAGSSRRRGGGRAVAVVAGIAVTVTAAAGGWAAQTF 214 Query 255 GATTLQRPPTTLLVEGRVALTIPADWSTQRVVSGPGSARVQVTSPADPEVALHVTQSPVP 314 A + T L+EGRVAL +PA+W+ +RV GSARV+V +P ALHVTQS + Sbjct 215 SAVPRPQMATRTLIEGRVALQVPAEWTVERVTGDAGSARVRVAAPGGLP-ALHVTQS-LG 272 Query 315 GETLP--GTAQRLKRAIDASPAGVFVDFNPSDIRAGRPAVTYREVRAGHQVRWTILLDGA 372 T+P + L+ A+ GVFVDF+ + RAGRPAVTY E R RW +++DG Sbjct 273 AATVPLAEVGESLRAALTLETDGVFVDFDAAGSRAGRPAVTYVERRTATLTRWAVIVDGP 332 Query 373 VRISVGCQSGPGHEDLLREVCAQAVRSVHAV 403 +RI++GCQ PG+ D + ++CA+AV S HA+ Sbjct 333 LRIAIGCQHEPGNRDSVEQICAEAVGSAHAL 363 >gi|262201639|ref|YP_003272847.1| hypothetical protein Gbro_1684 [Gordonia bronchialis DSM 43247] gi|262084986|gb|ACY20954.1| hypothetical protein Gbro_1684 [Gordonia bronchialis DSM 43247] Length=440 Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 50/145 (35%), Positives = 70/145 (49%), Gaps = 8/145 (5%) Query 262 PPTTLLVEGRVALTIPADW--STQRVVSG----PGSARVQVTSPADPEVALHVTQSPVPG 315 P + + GR LT+P W S Q SG PG+ R P D + V Sbjct 291 PASEQVAVGRTTLTVPGQWRRSEQATPSGASADPGTTRTVFVDPDDGRRLILVQTRVRDD 350 Query 316 ETLPGTAQRLKRAIDASPAGVFVDFNPSDIRAGRPAVTYREVRA-GHQVRWTILLDGAVR 374 T A L+ + V +F+PS AGR ++YRE A G +RW +L+D A++ Sbjct 351 STQASVAASLRNRLGQRGDDVVTEFSPSTRFAGRDVISYREAPASGSAIRWYVLVDHALQ 410 Query 375 ISVGCQSGPGHEDLLREVCAQAVRS 399 +S+GCQ G G E + E C QAVR+ Sbjct 411 VSIGCQPGTGAEPVDVE-CEQAVRT 434 >gi|343925124|ref|ZP_08764656.1| hypothetical protein GOALK_033_01150 [Gordonia alkanivorans NBRC 16433] gi|343765055|dbj|GAA11582.1| hypothetical protein GOALK_033_01150 [Gordonia alkanivorans NBRC 16433] Length=435 Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 81/246 (33%), Positives = 112/246 (46%), Gaps = 22/246 (8%) Query 169 DVPSTVAGAAALAAA--IAGAVRGTGSSVVEIDGVRLARLARAALPPSDEPADPAARPAT 226 D P V+ A L AA IAG V +V G R A A+P + +PA+PAA +T Sbjct 195 DDPVEVSAAIDLVAAHAIAGRVVPVDRDLVVRLGGRTGGAADDAVPVAGDPAEPAAGVST 254 Query 227 -RSRVPTLARVAAAGVALALLAPAAVVRHGATTLQR----PPTTLLVEGRVALTIPADW- 280 RSR RV A A A+L A G QR P + + GR L++P DW Sbjct 255 RRSR-----RVLAGAAAAAVLVVAGAFAVG--WWQRDDPAPAHSEVAVGRATLSVPGDWR 307 Query 281 -----STQRVVSGPGSARVQVTSPADPEVALHVTQSPVPGETLPGTAQRLKRAIDASPAG 335 + P + R S AD + V G T A L+ I Sbjct 308 QSGQDTPSDATDDPTTRRAVFVSEADGGRIIAVLTELRDGSTPQSVASSLRNRIGQRGDD 367 Query 336 VFVDFNPSDIRAGRPAVTYREVRA-GHQVRWTILLDGAVRISVGCQSGPGHEDLLREVCA 394 V +F+ AGR ++YRE A G +RW +++D +++S+GCQ+G E + E CA Sbjct 368 VVTEFSADTQYAGRDVISYREAPASGSAIRWYVIVDDGLQVSIGCQAGTTAESVDDE-CA 426 Query 395 QAVRSV 400 +AVRSV Sbjct 427 RAVRSV 432 >gi|326381858|ref|ZP_08203551.1| hypothetical protein SCNU_02902 [Gordonia neofelifaecis NRRL B-59395] gi|326199284|gb|EGD56465.1| hypothetical protein SCNU_02902 [Gordonia neofelifaecis NRRL B-59395] Length=387 Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 52/168 (31%), Positives = 69/168 (42%), Gaps = 5/168 (2%) Query 238 AAGVALALLAPAAVVRHGATTLQR--PPTTLLVE-GRVALTIPADWSTQRVVSGPGSARV 294 A GV A+L A V G R PP V+ GR L++P W + R Sbjct 219 APGVVAAVLLIAVAVAAGWMHWPRAAPPDRQTVQVGRAELSVPGRWHRSDLTDSGSGTRA 278 Query 295 QVTSPADPEVALHVTQSPVPGETLPGTAQRLKRAIDASPAGVFVDFNPSDIRAGRPAVTY 354 +P D + V G T A+ L+ I V F AGR + Y Sbjct 279 VFAAPDDGRRLIVVVSRLRTGSTSATVAESLRNRIGQRGDDVVAGFAADLSYAGRRVIGY 338 Query 355 REVRA-GHQVRWTILLDGAVRISVGCQSGPGHEDLLREVCAQAVRSVH 401 RE A G + W + +D ++SVGCQ G G ED + + C AV SV Sbjct 339 RETPASGAPIAWYVTVDAGSQVSVGCQGGTG-EDSVEDACRAAVGSVR 385 >gi|340524022|gb|AEK39227.1| molecular chaperone [Amycolatopsis mediterranei S699] Length=657 Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 31/81 (39%), Positives = 42/81 (52%), Gaps = 5/81 (6%) Query 325 LKRAIDASPAGVFVDFNPSDIRAGRPAVTYREVRAGH---QVRWTILLDGAVRISVGCQS 381 LKR D PA ++ FNPS AG+ + Y E + QV W ++ G +R+ VGCQ Sbjct 575 LKRRADEKPA-LYSAFNPSLSYAGKTVIGYHESKQDRPDLQVDWYVVAKGRIRVHVGCQY 633 Query 382 GPGH-EDLLREVCAQAVRSVH 401 D + CAQAVR+V Sbjct 634 ATSALRDRVAAACAQAVRTVE 654 >gi|300782651|ref|YP_003762942.1| molecular chaperone [Amycolatopsis mediterranei U32] gi|299792165|gb|ADJ42540.1| molecular chaperone [Amycolatopsis mediterranei U32] Length=663 Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 31/81 (39%), Positives = 42/81 (52%), Gaps = 5/81 (6%) Query 325 LKRAIDASPAGVFVDFNPSDIRAGRPAVTYREVRAGH---QVRWTILLDGAVRISVGCQS 381 LKR D PA ++ FNPS AG+ + Y E + QV W ++ G +R+ VGCQ Sbjct 581 LKRRADEKPA-LYSAFNPSLSYAGKTVIGYHESKQDRPDLQVDWYVVAKGRIRVHVGCQY 639 Query 382 GPGH-EDLLREVCAQAVRSVH 401 D + CAQAVR+V Sbjct 640 ATSALRDRVAAACAQAVRTVE 660 >gi|331699135|ref|YP_004335374.1| hypothetical protein Psed_5387 [Pseudonocardia dioxanivorans CB1190] gi|326953824|gb|AEA27521.1| hypothetical protein Psed_5387 [Pseudonocardia dioxanivorans CB1190] Length=402 Score = 49.7 bits (117), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 27/57 (48%), Positives = 35/57 (62%), Gaps = 1/57 (1%) Query 345 IRAGRPAVTYREVRA-GHQVRWTILLDGAVRISVGCQSGPGHEDLLREVCAQAVRSV 400 +RAGRP TY ++ A G V WT+LLDG ++SVGC+ G L CA+ V SV Sbjct 343 VRAGRPVTTYVQLLADGALVDWTVLLDGPAQLSVGCRHGSVTSGALTRACAEVVGSV 399 >gi|257054510|ref|YP_003132342.1| molecular chaperone [Saccharomonospora viridis DSM 43017] gi|256584382|gb|ACU95515.1| molecular chaperone [Saccharomonospora viridis DSM 43017] Length=665 Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust. Identities = 28/79 (36%), Positives = 39/79 (50%), Gaps = 2/79 (2%) Query 322 AQRLKRAIDASPAGVFVDFNPSDIRAGRPAVTYREVRAGHQVRWTILLDGAVRISVGCQS 381 A L+ A+P V+ DF+ AG V YRE + V W +L G ++SVGCQ Sbjct 585 ADELREQTSANP-DVYTDFSEHYEYAGHDVVHYRENKPAATVHWYVLAHGTAQVSVGCQE 643 Query 382 GPGHEDLLREVCAQAVRSV 400 E +R C Q VR++ Sbjct 644 AKLRE-RVRAACEQIVRTL 661 >gi|312140878|ref|YP_004008214.1| esx cluster membrane protein [Rhodococcus equi 103S] gi|311890217|emb|CBH49535.1| putative esx cluster membrane protein [Rhodococcus equi 103S] Length=470 Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust. Identities = 45/143 (32%), Positives = 67/143 (47%), Gaps = 10/143 (6%) Query 262 PPTTLLVEGRVALTIPADWSTQRVVSGPGSARVQVT--SPADPEVALHVTQSPVPGETLP 319 PP + + GR + +P W V G S R+ + D + + T+ V G Sbjct 328 PPQRVEI-GRASTELPDSWQ----VRGDRSGRLDLVPDDGRDGRIVVLPTELAV-GSAWD 381 Query 320 GTAQRLKRAI-DASPAGVFVDFNPSDIRAGRPAVTYREVRA-GHQVRWTILLDGAVRISV 377 + L+R I + AG F DF GR + Y E A G +VRW +LL+ V++SV Sbjct 382 SVVRGLERKIGERGAAGPFSDFAADVEFGGRRSAAYVEAPADGSRVRWYVLLEDDVQVSV 441 Query 378 GCQSGPGHEDLLREVCAQAVRSV 400 GCQ + + + C QAVR+V Sbjct 442 GCQYRDAGWEAIADDCEQAVRAV 464 >gi|325675484|ref|ZP_08155168.1| hypothetical protein HMPREF0724_12950 [Rhodococcus equi ATCC 33707] gi|325553455|gb|EGD23133.1| hypothetical protein HMPREF0724_12950 [Rhodococcus equi ATCC 33707] Length=470 Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust. Identities = 43/135 (32%), Positives = 62/135 (46%), Gaps = 9/135 (6%) Query 270 GRVALTIPADWSTQRVVSGPGSARVQVT--SPADPEVALHVTQSPVPGETLPGTAQRLKR 327 GR + +P W V G S R+ + D + + T+ V G + L+R Sbjct 335 GRASTELPDSWQ----VRGDRSGRLDLVPDDGRDGRIVVLPTELAV-GSAWDSVVRGLER 389 Query 328 AI-DASPAGVFVDFNPSDIRAGRPAVTYREVRA-GHQVRWTILLDGAVRISVGCQSGPGH 385 I + AG F DF GR + Y E G +VRW +LL+ V++SVGCQ Sbjct 390 KIGERGAAGPFSDFAADVEFGGRRSAAYVEAPVDGSRVRWYVLLEDDVQVSVGCQYRDAG 449 Query 386 EDLLREVCAQAVRSV 400 + + E C QAVR+V Sbjct 450 WEAIAEDCEQAVRAV 464 >gi|226305390|ref|YP_002765348.1| hypothetical protein RER_19010 [Rhodococcus erythropolis PR4] gi|226184505|dbj|BAH32609.1| hypothetical protein RER_19010 [Rhodococcus erythropolis PR4] Length=494 Score = 46.2 bits (108), Expect = 0.009, Method: Compositional matrix adjust. Identities = 37/142 (27%), Positives = 63/142 (45%), Gaps = 3/142 (2%) Query 262 PPTTLLVEGRVALTIPADWSTQRVVSGPGSARVQVTSPADPEVALHVTQSPVPGETLPGT 321 P T + G VA +P+DW + G + +S AD ++ + + + G Sbjct 351 PELTRVEVGSVAAELPSDWKLLSRGTSSGRTDLIPSSGADRKIVV-IEKRLAEGAGFDSV 409 Query 322 AQRLKRAIDASPAGV-FVDFNPSDIRAGRPAVTYREVRAGH-QVRWTILLDGAVRISVGC 379 L++ A + F +F+ D AG+ AV Y E +VRW + +D ++S+GC Sbjct 410 EAALRQQFSAFEDPLRFGEFSVIDDAAGKQAVVYVEFPDDFSEVRWRVYVDNGRQVSIGC 469 Query 380 QSGPGHEDLLREVCAQAVRSVH 401 Q G D L C + +S+ Sbjct 470 QYLVGEWDSLEADCLRMWQSLE 491 >gi|256380554|ref|YP_003104214.1| Heat shock protein 70 [Actinosynnema mirum DSM 43827] gi|255924857|gb|ACU40368.1| Heat shock protein 70 [Actinosynnema mirum DSM 43827] Length=643 Score = 45.8 bits (107), Expect = 0.014, Method: Compositional matrix adjust. Identities = 24/82 (30%), Positives = 38/82 (47%), Gaps = 0/82 (0%) Query 319 PGTAQRLKRAIDASPAGVFVDFNPSDIRAGRPAVTYREVRAGHQVRWTILLDGAVRISVG 378 PG A+ RA + G DF+ A + V +RE G W ++ G V++SVG Sbjct 558 PGRAEAELRAQYEAGGGNLSDFDARASFADKDVVRFREAGQGASTDWYVVFQGRVQVSVG 617 Query 379 CQSGPGHEDLLREVCAQAVRSV 400 C+ + +R C VR++ Sbjct 618 CRYADQDRERVRSACEHVVRTL 639 >gi|302524035|ref|ZP_07276377.1| predicted protein [Streptomyces sp. AA4] gi|302432930|gb|EFL04746.1| predicted protein [Streptomyces sp. AA4] Length=667 Score = 42.0 bits (97), Expect = 0.17, Method: Compositional matrix adjust. Identities = 42/148 (29%), Positives = 61/148 (42%), Gaps = 33/148 (22%) Query 272 VALTIPADWSTQRVVSGPGSARVQVTSP-ADPEVALHVTQSPVPGETL----------PG 320 +L P+DW +Q T AD +V LH Q G L Sbjct 532 FSLVAPSDW-------------IQTTDEVADRQVILH-PQDAANGNDLVLAQEFVMDYDA 577 Query 321 TAQRLKRAIDASPAGV-----FVDFNPSDIRAGRPAVTYREVRAGH-QVRWTILLDGAVR 374 TA R ++ +DA +GV + F P GR + Y E + VRW +L+ G +R Sbjct 578 TADR-QKLVDALRSGVSGNANYTAFRPDLTYGGRNVIGYVESKPERITVRWYVLVQGRIR 636 Query 375 ISVGCQ-SGPGHEDLLREVCAQAVRSVH 401 + VGCQ P + + C Q VR++ Sbjct 637 VHVGCQYQSPAVQQRVDAACEQVVRTLK 664 >gi|296141058|ref|YP_003648301.1| hypothetical protein Tpau_3378 [Tsukamurella paurometabola DSM 20162] gi|296029192|gb|ADG79962.1| hypothetical protein Tpau_3378 [Tsukamurella paurometabola DSM 20162] Length=412 Score = 38.5 bits (88), Expect = 2.2, Method: Compositional matrix adjust. Identities = 28/82 (35%), Positives = 42/82 (52%), Gaps = 2/82 (2%) Query 322 AQRLKRAIDASPAGVFVDFNPSDIRAGRPAVTYREVRAGHQ-VRWTILLDGAVRISVGCQ 380 A L+ A+D D +P+ AGR + YRE A + V W +++ ++SVGC+ Sbjct 314 AAELRTALDRRDDQRISDLDPAGTVAGRDVIGYRERLAADRIVDWYVVVADDAQLSVGCE 373 Query 381 SGPGHEDLLREVCAQAVRSVHA 402 +G L C +AVRSV A Sbjct 374 AGRTAAPLAGP-CERAVRSVRA 394 >gi|54022819|ref|YP_117061.1| hypothetical protein nfa8520 [Nocardia farcinica IFM 10152] gi|54014327|dbj|BAD55697.1| hypothetical protein [Nocardia farcinica IFM 10152] Length=483 Score = 36.6 bits (83), Expect = 8.8, Method: Compositional matrix adjust. Identities = 33/138 (24%), Positives = 56/138 (41%), Gaps = 8/138 (5%) Query 270 GRVALTIPADWS-TQRVVSGPGSARVQVTSPADPEVALHVTQSPV-PGETLPGTAQRLKR 327 G + +P W T SG R+ +T + L + +PV P A L+ Sbjct 351 GPITFEVPEGWRITTPTRSG---NRLDLTPEDGARLRLTLVHTPVDPAAGYTRIAADLEA 407 Query 328 AIDASPAGVFVDFNPSDIRAGRPAVTYRE-VRAGHQVRWTILLDGAVRISVGCQSGPGHE 386 + P+ D + AGRP ++Y E G V W +L++ ++S+GCQ Sbjct 408 QMAQKPS--LSDLRRDVVFAGRPGLSYIERPDGGSTVHWHVLVEHGTQVSIGCQYAGDGW 465 Query 387 DLLREVCAQAVRSVHAVG 404 + + C + S+ G Sbjct 466 ERVESACERFAESIDVRG 483 Lambda K H 0.319 0.131 0.379 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 801003752784 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40