BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv3450c Length=470 Score E Sequences producing significant alignments: (Bits) Value gi|289555722|ref|ZP_06444932.1| conserved membrane protein [Myco... 913 0.0 gi|15843045|ref|NP_338082.1| hypothetical protein MT3556 [Mycoba... 913 0.0 gi|15610586|ref|NP_217967.1| hypothetical protein Rv3450c [Mycob... 912 0.0 gi|289449155|ref|ZP_06438899.1| conserved membrane protein [Myco... 911 0.0 gi|308371351|ref|ZP_07667145.1| conserved membrane protein [Myco... 911 0.0 gi|306782516|ref|ZP_07420853.1| conserved membrane protein [Myco... 909 0.0 gi|340628421|ref|YP_004746873.1| hypothetical protein MCAN_34671... 902 0.0 gi|298526935|ref|ZP_07014344.1| conserved hypothetical protein [... 878 0.0 gi|183981119|ref|YP_001849410.1| hypothetical protein MMAR_1099 ... 525 8e-147 gi|118616632|ref|YP_904964.1| hypothetical protein MUL_0857 [Myc... 525 8e-147 gi|240167791|ref|ZP_04746450.1| hypothetical protein MkanA1_0064... 516 3e-144 gi|296168690|ref|ZP_06850439.1| MPSS family PPE41 protein secret... 505 6e-141 gi|254819226|ref|ZP_05224227.1| hypothetical protein MintA_04831... 485 9e-135 gi|342861875|ref|ZP_08718520.1| hypothetical protein MCOL_23415 ... 466 5e-129 gi|254776825|ref|ZP_05218341.1| hypothetical protein MaviaA2_194... 456 3e-126 gi|41410336|ref|NP_963172.1| hypothetical protein MAP4238 [Mycob... 447 1e-123 gi|118464971|ref|YP_883528.1| hypothetical protein MAV_4392 [Myc... 447 2e-123 gi|169630838|ref|YP_001704487.1| hypothetical protein MAB_3759c ... 383 4e-104 gi|120402455|ref|YP_952284.1| hypothetical protein Mvan_1444 [My... 355 1e-95 gi|119867191|ref|YP_937143.1| hypothetical protein Mkms_1140 [My... 335 7e-90 gi|108798095|ref|YP_638292.1| hypothetical protein Mmcs_1123 [My... 335 1e-89 gi|226365629|ref|YP_002783412.1| hypothetical protein ROP_62200 ... 311 2e-82 gi|118471784|ref|YP_885915.1| hypothetical protein MSMEG_1534 [M... 302 9e-80 gi|229489476|ref|ZP_04383339.1| conserved hypothetical protein [... 296 4e-78 gi|226305377|ref|YP_002765335.1| hypothetical protein RER_18880 ... 294 2e-77 gi|145225538|ref|YP_001136216.1| hypothetical protein Mflv_4962 ... 294 2e-77 gi|54022814|ref|YP_117056.1| hypothetical protein nfa8470 [Nocar... 281 2e-73 gi|333918177|ref|YP_004491758.1| hypothetical protein AS9A_0501 ... 275 1e-71 gi|325675480|ref|ZP_08155164.1| MPSS family PPE41 protein secret... 273 6e-71 gi|312140882|ref|YP_004008218.1| esx cluster lipoprotein [Rhodoc... 267 3e-69 gi|54022792|ref|YP_117034.1| hypothetical protein nfa8250 [Nocar... 258 2e-66 gi|296141047|ref|YP_003648290.1| hypothetical protein Tpau_3367 ... 257 3e-66 gi|262203184|ref|YP_003274392.1| hypothetical protein Gbro_3295 ... 251 2e-64 gi|118473477|ref|YP_885027.1| hypothetical protein MSMEG_0616 [M... 234 2e-59 gi|343926911|ref|ZP_08766404.1| hypothetical protein GOALK_072_0... 233 6e-59 gi|240173108|ref|ZP_04751766.1| hypothetical protein MkanA1_2759... 226 7e-57 gi|340625321|ref|YP_004743773.1| hypothetical protein MCAN_02921... 224 2e-56 gi|296394877|ref|YP_003659761.1| hypothetical protein Srot_2493 ... 224 2e-56 gi|336460188|gb|EGO39092.1| type VII secretion protein EccB, Act... 223 4e-56 gi|41409877|ref|NP_962713.1| hypothetical protein MAP3779 [Mycob... 223 7e-56 gi|254777311|ref|ZP_05218827.1| hypothetical protein MaviaA2_219... 221 2e-55 gi|254818904|ref|ZP_05223905.1| hypothetical protein MintA_03211... 221 3e-55 gi|118463197|ref|YP_883992.1| hypothetical protein MAV_4870 [Myc... 220 5e-55 gi|289572868|ref|ZP_06453095.1| conserved membrane protein [Myco... 219 6e-55 gi|298523754|ref|ZP_07011163.1| conserved hypothetical protein [... 219 8e-55 gi|15607424|ref|NP_214797.1| hypothetical protein Rv0283 [Mycoba... 219 9e-55 gi|333988931|ref|YP_004521545.1| hypothetical protein JDM601_029... 219 1e-54 gi|342859233|ref|ZP_08715887.1| hypothetical protein MCOL_10153 ... 217 3e-54 gi|326381475|ref|ZP_08203169.1| hypothetical protein SCNU_00950 ... 214 2e-53 gi|15828367|ref|NP_302630.1| hypothetical protein ML2536 [Mycoba... 214 3e-53 >gi|289555722|ref|ZP_06444932.1| conserved membrane protein [Mycobacterium tuberculosis KZN 605] gi|308379517|ref|ZP_07668974.1| conserved membrane protein [Mycobacterium tuberculosis SUMu010] gi|289440354|gb|EFD22847.1| conserved membrane protein [Mycobacterium tuberculosis KZN 605] gi|308356754|gb|EFP45605.1| conserved membrane protein [Mycobacterium tuberculosis SUMu010] gi|323717934|gb|EGB27123.1| membrane protein [Mycobacterium tuberculosis CDC1551A] gi|328460226|gb|AEB05649.1| conserved membrane protein [Mycobacterium tuberculosis KZN 4207] gi|339296274|gb|AEJ48385.1| hypothetical protein CCDC5079_3196 [Mycobacterium tuberculosis CCDC5079] gi|339299877|gb|AEJ51987.1| hypothetical protein CCDC5180_3150 [Mycobacterium tuberculosis CCDC5180] Length=474 Score = 913 bits (2360), Expect = 0.0, Method: Compositional matrix adjust. Identities = 470/470 (100%), Positives = 470/470 (100%), Gaps = 0/470 (0%) Query 1 VPSPATTWLHVSGYRFLLRRIECALLFGDVCAATGALRARTTSLALGCVLAIVAAMGCAF 60 VPSPATTWLHVSGYRFLLRRIECALLFGDVCAATGALRARTTSLALGCVLAIVAAMGCAF Sbjct 5 VPSPATTWLHVSGYRFLLRRIECALLFGDVCAATGALRARTTSLALGCVLAIVAAMGCAF 64 Query 61 VALLRPQSALGQAPIVMGRESGALYVRVDDVWHPVLNLASARLIAATNANPQPVSESELG 120 VALLRPQSALGQAPIVMGRESGALYVRVDDVWHPVLNLASARLIAATNANPQPVSESELG Sbjct 65 VALLRPQSALGQAPIVMGRESGALYVRVDDVWHPVLNLASARLIAATNANPQPVSESELG 124 Query 121 HTKRGPLLGIPGAPQLLDQPLAGAESAWAICDSDNGGSTTVVVGPAEDSSAQVLTAEQMI 180 HTKRGPLLGIPGAPQLLDQPLAGAESAWAICDSDNGGSTTVVVGPAEDSSAQVLTAEQMI Sbjct 125 HTKRGPLLGIPGAPQLLDQPLAGAESAWAICDSDNGGSTTVVVGPAEDSSAQVLTAEQMI 184 Query 181 LVATESGSPTYLLYGGRRAVVDLADPAVVWALRLQGRVPHVVAQSLLNAVPEAPRITAPR 240 LVATESGSPTYLLYGGRRAVVDLADPAVVWALRLQGRVPHVVAQSLLNAVPEAPRITAPR Sbjct 185 LVATESGSPTYLLYGGRRAVVDLADPAVVWALRLQGRVPHVVAQSLLNAVPEAPRITAPR 244 Query 241 IRGGGRASVGLPGFLVGGVVRITRASGDEYYVVLEDGVQRIGQVAADLLRFGDSQGSVNV 300 IRGGGRASVGLPGFLVGGVVRITRASGDEYYVVLEDGVQRIGQVAADLLRFGDSQGSVNV Sbjct 245 IRGGGRASVGLPGFLVGGVVRITRASGDEYYVVLEDGVQRIGQVAADLLRFGDSQGSVNV 304 Query 301 PTVAPDVIRVAPIVNTLPVSAFPDRPPTPVDGSPGRAVTTLCVTWTPAQPGAARVAFLAG 360 PTVAPDVIRVAPIVNTLPVSAFPDRPPTPVDGSPGRAVTTLCVTWTPAQPGAARVAFLAG Sbjct 305 PTVAPDVIRVAPIVNTLPVSAFPDRPPTPVDGSPGRAVTTLCVTWTPAQPGAARVAFLAG 364 Query 361 SGPPVPLGGVPVTLAQADGRGPALDAVYLPPGRSAYVAARSLSGGGTGTRYLVTDTGVRF 420 SGPPVPLGGVPVTLAQADGRGPALDAVYLPPGRSAYVAARSLSGGGTGTRYLVTDTGVRF Sbjct 365 SGPPVPLGGVPVTLAQADGRGPALDAVYLPPGRSAYVAARSLSGGGTGTRYLVTDTGVRF 424 Query 421 AIHDDDVAHDLGLPTAAIPAPWPVLATLPSGPELSRANASVARDTVAPGP 470 AIHDDDVAHDLGLPTAAIPAPWPVLATLPSGPELSRANASVARDTVAPGP Sbjct 425 AIHDDDVAHDLGLPTAAIPAPWPVLATLPSGPELSRANASVARDTVAPGP 474 >gi|15843045|ref|NP_338082.1| hypothetical protein MT3556 [Mycobacterium tuberculosis CDC1551] gi|148824660|ref|YP_001289414.1| hypothetical protein TBFG_13487 [Mycobacterium tuberculosis F11] gi|253800495|ref|YP_003033496.1| hypothetical protein TBMG_03498 [Mycobacterium tuberculosis KZN 1435] gi|289747284|ref|ZP_06506662.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987] gi|13883388|gb|AAK47896.1| conserved hypothetical protein [Mycobacterium tuberculosis CDC1551] gi|148723187|gb|ABR07812.1| conserved membrane protein [Mycobacterium tuberculosis F11] gi|253321998|gb|ACT26601.1| conserved membrane protein [Mycobacterium tuberculosis KZN 1435] gi|289687812|gb|EFD55300.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987] Length=482 Score = 913 bits (2360), Expect = 0.0, Method: Compositional matrix adjust. Identities = 470/470 (100%), Positives = 470/470 (100%), Gaps = 0/470 (0%) Query 1 VPSPATTWLHVSGYRFLLRRIECALLFGDVCAATGALRARTTSLALGCVLAIVAAMGCAF 60 VPSPATTWLHVSGYRFLLRRIECALLFGDVCAATGALRARTTSLALGCVLAIVAAMGCAF Sbjct 13 VPSPATTWLHVSGYRFLLRRIECALLFGDVCAATGALRARTTSLALGCVLAIVAAMGCAF 72 Query 61 VALLRPQSALGQAPIVMGRESGALYVRVDDVWHPVLNLASARLIAATNANPQPVSESELG 120 VALLRPQSALGQAPIVMGRESGALYVRVDDVWHPVLNLASARLIAATNANPQPVSESELG Sbjct 73 VALLRPQSALGQAPIVMGRESGALYVRVDDVWHPVLNLASARLIAATNANPQPVSESELG 132 Query 121 HTKRGPLLGIPGAPQLLDQPLAGAESAWAICDSDNGGSTTVVVGPAEDSSAQVLTAEQMI 180 HTKRGPLLGIPGAPQLLDQPLAGAESAWAICDSDNGGSTTVVVGPAEDSSAQVLTAEQMI Sbjct 133 HTKRGPLLGIPGAPQLLDQPLAGAESAWAICDSDNGGSTTVVVGPAEDSSAQVLTAEQMI 192 Query 181 LVATESGSPTYLLYGGRRAVVDLADPAVVWALRLQGRVPHVVAQSLLNAVPEAPRITAPR 240 LVATESGSPTYLLYGGRRAVVDLADPAVVWALRLQGRVPHVVAQSLLNAVPEAPRITAPR Sbjct 193 LVATESGSPTYLLYGGRRAVVDLADPAVVWALRLQGRVPHVVAQSLLNAVPEAPRITAPR 252 Query 241 IRGGGRASVGLPGFLVGGVVRITRASGDEYYVVLEDGVQRIGQVAADLLRFGDSQGSVNV 300 IRGGGRASVGLPGFLVGGVVRITRASGDEYYVVLEDGVQRIGQVAADLLRFGDSQGSVNV Sbjct 253 IRGGGRASVGLPGFLVGGVVRITRASGDEYYVVLEDGVQRIGQVAADLLRFGDSQGSVNV 312 Query 301 PTVAPDVIRVAPIVNTLPVSAFPDRPPTPVDGSPGRAVTTLCVTWTPAQPGAARVAFLAG 360 PTVAPDVIRVAPIVNTLPVSAFPDRPPTPVDGSPGRAVTTLCVTWTPAQPGAARVAFLAG Sbjct 313 PTVAPDVIRVAPIVNTLPVSAFPDRPPTPVDGSPGRAVTTLCVTWTPAQPGAARVAFLAG 372 Query 361 SGPPVPLGGVPVTLAQADGRGPALDAVYLPPGRSAYVAARSLSGGGTGTRYLVTDTGVRF 420 SGPPVPLGGVPVTLAQADGRGPALDAVYLPPGRSAYVAARSLSGGGTGTRYLVTDTGVRF Sbjct 373 SGPPVPLGGVPVTLAQADGRGPALDAVYLPPGRSAYVAARSLSGGGTGTRYLVTDTGVRF 432 Query 421 AIHDDDVAHDLGLPTAAIPAPWPVLATLPSGPELSRANASVARDTVAPGP 470 AIHDDDVAHDLGLPTAAIPAPWPVLATLPSGPELSRANASVARDTVAPGP Sbjct 433 AIHDDDVAHDLGLPTAAIPAPWPVLATLPSGPELSRANASVARDTVAPGP 482 >gi|15610586|ref|NP_217967.1| hypothetical protein Rv3450c [Mycobacterium tuberculosis H37Rv] gi|31794627|ref|NP_857120.1| hypothetical protein Mb3480c [Mycobacterium bovis AF2122/97] gi|121639371|ref|YP_979595.1| hypothetical protein BCG_3516c [Mycobacterium bovis BCG str. Pasteur 1173P2] 41 more sequence titles Length=470 Score = 912 bits (2357), Expect = 0.0, Method: Compositional matrix adjust. Identities = 469/470 (99%), Positives = 470/470 (100%), Gaps = 0/470 (0%) Query 1 VPSPATTWLHVSGYRFLLRRIECALLFGDVCAATGALRARTTSLALGCVLAIVAAMGCAF 60 +PSPATTWLHVSGYRFLLRRIECALLFGDVCAATGALRARTTSLALGCVLAIVAAMGCAF Sbjct 1 MPSPATTWLHVSGYRFLLRRIECALLFGDVCAATGALRARTTSLALGCVLAIVAAMGCAF 60 Query 61 VALLRPQSALGQAPIVMGRESGALYVRVDDVWHPVLNLASARLIAATNANPQPVSESELG 120 VALLRPQSALGQAPIVMGRESGALYVRVDDVWHPVLNLASARLIAATNANPQPVSESELG Sbjct 61 VALLRPQSALGQAPIVMGRESGALYVRVDDVWHPVLNLASARLIAATNANPQPVSESELG 120 Query 121 HTKRGPLLGIPGAPQLLDQPLAGAESAWAICDSDNGGSTTVVVGPAEDSSAQVLTAEQMI 180 HTKRGPLLGIPGAPQLLDQPLAGAESAWAICDSDNGGSTTVVVGPAEDSSAQVLTAEQMI Sbjct 121 HTKRGPLLGIPGAPQLLDQPLAGAESAWAICDSDNGGSTTVVVGPAEDSSAQVLTAEQMI 180 Query 181 LVATESGSPTYLLYGGRRAVVDLADPAVVWALRLQGRVPHVVAQSLLNAVPEAPRITAPR 240 LVATESGSPTYLLYGGRRAVVDLADPAVVWALRLQGRVPHVVAQSLLNAVPEAPRITAPR Sbjct 181 LVATESGSPTYLLYGGRRAVVDLADPAVVWALRLQGRVPHVVAQSLLNAVPEAPRITAPR 240 Query 241 IRGGGRASVGLPGFLVGGVVRITRASGDEYYVVLEDGVQRIGQVAADLLRFGDSQGSVNV 300 IRGGGRASVGLPGFLVGGVVRITRASGDEYYVVLEDGVQRIGQVAADLLRFGDSQGSVNV Sbjct 241 IRGGGRASVGLPGFLVGGVVRITRASGDEYYVVLEDGVQRIGQVAADLLRFGDSQGSVNV 300 Query 301 PTVAPDVIRVAPIVNTLPVSAFPDRPPTPVDGSPGRAVTTLCVTWTPAQPGAARVAFLAG 360 PTVAPDVIRVAPIVNTLPVSAFPDRPPTPVDGSPGRAVTTLCVTWTPAQPGAARVAFLAG Sbjct 301 PTVAPDVIRVAPIVNTLPVSAFPDRPPTPVDGSPGRAVTTLCVTWTPAQPGAARVAFLAG 360 Query 361 SGPPVPLGGVPVTLAQADGRGPALDAVYLPPGRSAYVAARSLSGGGTGTRYLVTDTGVRF 420 SGPPVPLGGVPVTLAQADGRGPALDAVYLPPGRSAYVAARSLSGGGTGTRYLVTDTGVRF Sbjct 361 SGPPVPLGGVPVTLAQADGRGPALDAVYLPPGRSAYVAARSLSGGGTGTRYLVTDTGVRF 420 Query 421 AIHDDDVAHDLGLPTAAIPAPWPVLATLPSGPELSRANASVARDTVAPGP 470 AIHDDDVAHDLGLPTAAIPAPWPVLATLPSGPELSRANASVARDTVAPGP Sbjct 421 AIHDDDVAHDLGLPTAAIPAPWPVLATLPSGPELSRANASVARDTVAPGP 470 >gi|289449155|ref|ZP_06438899.1| conserved membrane protein [Mycobacterium tuberculosis CPHL_A] gi|289422113|gb|EFD19314.1| conserved membrane protein [Mycobacterium tuberculosis CPHL_A] Length=470 Score = 911 bits (2354), Expect = 0.0, Method: Compositional matrix adjust. Identities = 468/470 (99%), Positives = 469/470 (99%), Gaps = 0/470 (0%) Query 1 VPSPATTWLHVSGYRFLLRRIECALLFGDVCAATGALRARTTSLALGCVLAIVAAMGCAF 60 +PSPATTWLHVSGYRFLLRRIECALLFGDVCAATGALRARTTSLALGCVLAIVAAMGCAF Sbjct 1 MPSPATTWLHVSGYRFLLRRIECALLFGDVCAATGALRARTTSLALGCVLAIVAAMGCAF 60 Query 61 VALLRPQSALGQAPIVMGRESGALYVRVDDVWHPVLNLASARLIAATNANPQPVSESELG 120 VALLRPQSALGQAPIVMGRESGALYVRVDDVWHPVLNLASARLIAATN NPQPVSESELG Sbjct 61 VALLRPQSALGQAPIVMGRESGALYVRVDDVWHPVLNLASARLIAATNVNPQPVSESELG 120 Query 121 HTKRGPLLGIPGAPQLLDQPLAGAESAWAICDSDNGGSTTVVVGPAEDSSAQVLTAEQMI 180 HTKRGPLLGIPGAPQLLDQPLAGAESAWAICDSDNGGSTTVVVGPAEDSSAQVLTAEQMI Sbjct 121 HTKRGPLLGIPGAPQLLDQPLAGAESAWAICDSDNGGSTTVVVGPAEDSSAQVLTAEQMI 180 Query 181 LVATESGSPTYLLYGGRRAVVDLADPAVVWALRLQGRVPHVVAQSLLNAVPEAPRITAPR 240 LVATESGSPTYLLYGGRRAVVDLADPAVVWALRLQGRVPHVVAQSLLNAVPEAPRITAPR Sbjct 181 LVATESGSPTYLLYGGRRAVVDLADPAVVWALRLQGRVPHVVAQSLLNAVPEAPRITAPR 240 Query 241 IRGGGRASVGLPGFLVGGVVRITRASGDEYYVVLEDGVQRIGQVAADLLRFGDSQGSVNV 300 IRGGGRASVGLPGFLVGGVVRITRASGDEYYVVLEDGVQRIGQVAADLLRFGDSQGSVNV Sbjct 241 IRGGGRASVGLPGFLVGGVVRITRASGDEYYVVLEDGVQRIGQVAADLLRFGDSQGSVNV 300 Query 301 PTVAPDVIRVAPIVNTLPVSAFPDRPPTPVDGSPGRAVTTLCVTWTPAQPGAARVAFLAG 360 PTVAPDVIRVAPIVNTLPVSAFPDRPPTPVDGSPGRAVTTLCVTWTPAQPGAARVAFLAG Sbjct 301 PTVAPDVIRVAPIVNTLPVSAFPDRPPTPVDGSPGRAVTTLCVTWTPAQPGAARVAFLAG 360 Query 361 SGPPVPLGGVPVTLAQADGRGPALDAVYLPPGRSAYVAARSLSGGGTGTRYLVTDTGVRF 420 SGPPVPLGGVPVTLAQADGRGPALDAVYLPPGRSAYVAARSLSGGGTGTRYLVTDTGVRF Sbjct 361 SGPPVPLGGVPVTLAQADGRGPALDAVYLPPGRSAYVAARSLSGGGTGTRYLVTDTGVRF 420 Query 421 AIHDDDVAHDLGLPTAAIPAPWPVLATLPSGPELSRANASVARDTVAPGP 470 AIHDDDVAHDLGLPTAAIPAPWPVLATLPSGPELSRANASVARDTVAPGP Sbjct 421 AIHDDDVAHDLGLPTAAIPAPWPVLATLPSGPELSRANASVARDTVAPGP 470 >gi|308371351|ref|ZP_07667145.1| conserved membrane protein [Mycobacterium tuberculosis SUMu003] gi|308372550|ref|ZP_07429026.2| conserved membrane protein [Mycobacterium tuberculosis SUMu004] gi|308374879|ref|ZP_07667890.1| conserved membrane protein [Mycobacterium tuberculosis SUMu006] gi|308377355|ref|ZP_07668495.1| conserved membrane protein [Mycobacterium tuberculosis SUMu008] gi|308329087|gb|EFP17938.1| conserved membrane protein [Mycobacterium tuberculosis SUMu003] gi|308332897|gb|EFP21748.1| conserved membrane protein [Mycobacterium tuberculosis SUMu004] gi|308340432|gb|EFP29283.1| conserved membrane protein [Mycobacterium tuberculosis SUMu006] gi|308348185|gb|EFP37036.1| conserved membrane protein [Mycobacterium tuberculosis SUMu008] Length=474 Score = 911 bits (2354), Expect = 0.0, Method: Compositional matrix adjust. Identities = 469/470 (99%), Positives = 469/470 (99%), Gaps = 0/470 (0%) Query 1 VPSPATTWLHVSGYRFLLRRIECALLFGDVCAATGALRARTTSLALGCVLAIVAAMGCAF 60 VPSPATTWLHVSGYRFLLRRIECALLFGDVCAATGALRARTTSLALGCVLAIVAAMGCAF Sbjct 5 VPSPATTWLHVSGYRFLLRRIECALLFGDVCAATGALRARTTSLALGCVLAIVAAMGCAF 64 Query 61 VALLRPQSALGQAPIVMGRESGALYVRVDDVWHPVLNLASARLIAATNANPQPVSESELG 120 VALLRPQSALGQAPIVMGRESGALYVRVDDVWHPVLNLASARLIAATNANPQPVSESELG Sbjct 65 VALLRPQSALGQAPIVMGRESGALYVRVDDVWHPVLNLASARLIAATNANPQPVSESELG 124 Query 121 HTKRGPLLGIPGAPQLLDQPLAGAESAWAICDSDNGGSTTVVVGPAEDSSAQVLTAEQMI 180 HTKRGPLLGIPGAPQLLDQPLAGAESAWAICDSDNGGSTTVVVGPAEDSSAQVLTAEQMI Sbjct 125 HTKRGPLLGIPGAPQLLDQPLAGAESAWAICDSDNGGSTTVVVGPAEDSSAQVLTAEQMI 184 Query 181 LVATESGSPTYLLYGGRRAVVDLADPAVVWALRLQGRVPHVVAQSLLNAVPEAPRITAPR 240 LVATESGSPTYLLYGGRRAVVDLADPAVVWALRLQGRVPHVVAQSLLNAVPEAPRITAPR Sbjct 185 LVATESGSPTYLLYGGRRAVVDLADPAVVWALRLQGRVPHVVAQSLLNAVPEAPRITAPR 244 Query 241 IRGGGRASVGLPGFLVGGVVRITRASGDEYYVVLEDGVQRIGQVAADLLRFGDSQGSVNV 300 IRGGGRASVGLPGFLVGGVVRITRASGDEYYVVLEDGVQRIGQVAADLLRFGDSQGSVNV Sbjct 245 IRGGGRASVGLPGFLVGGVVRITRASGDEYYVVLEDGVQRIGQVAADLLRFGDSQGSVNV 304 Query 301 PTVAPDVIRVAPIVNTLPVSAFPDRPPTPVDGSPGRAVTTLCVTWTPAQPGAARVAFLAG 360 PTVAPDVIRVAPIVNTLPVSAFPDRPPTPVDGSPGRAVTTLCVTWTPAQP AARVAFLAG Sbjct 305 PTVAPDVIRVAPIVNTLPVSAFPDRPPTPVDGSPGRAVTTLCVTWTPAQPDAARVAFLAG 364 Query 361 SGPPVPLGGVPVTLAQADGRGPALDAVYLPPGRSAYVAARSLSGGGTGTRYLVTDTGVRF 420 SGPPVPLGGVPVTLAQADGRGPALDAVYLPPGRSAYVAARSLSGGGTGTRYLVTDTGVRF Sbjct 365 SGPPVPLGGVPVTLAQADGRGPALDAVYLPPGRSAYVAARSLSGGGTGTRYLVTDTGVRF 424 Query 421 AIHDDDVAHDLGLPTAAIPAPWPVLATLPSGPELSRANASVARDTVAPGP 470 AIHDDDVAHDLGLPTAAIPAPWPVLATLPSGPELSRANASVARDTVAPGP Sbjct 425 AIHDDDVAHDLGLPTAAIPAPWPVLATLPSGPELSRANASVARDTVAPGP 474 >gi|306782516|ref|ZP_07420853.1| conserved membrane protein [Mycobacterium tuberculosis SUMu002] gi|306795232|ref|ZP_07433534.1| conserved membrane protein [Mycobacterium tuberculosis SUMu005] gi|306809454|ref|ZP_07446122.1| conserved membrane protein [Mycobacterium tuberculosis SUMu007] gi|306969562|ref|ZP_07482223.1| conserved membrane protein [Mycobacterium tuberculosis SUMu009] gi|308324833|gb|EFP13684.1| conserved membrane protein [Mycobacterium tuberculosis SUMu002] gi|308336557|gb|EFP25408.1| conserved membrane protein [Mycobacterium tuberculosis SUMu005] gi|308344294|gb|EFP33145.1| conserved membrane protein [Mycobacterium tuberculosis SUMu007] gi|308352909|gb|EFP41760.1| conserved membrane protein [Mycobacterium tuberculosis SUMu009] Length=470 Score = 909 bits (2350), Expect = 0.0, Method: Compositional matrix adjust. Identities = 468/470 (99%), Positives = 469/470 (99%), Gaps = 0/470 (0%) Query 1 VPSPATTWLHVSGYRFLLRRIECALLFGDVCAATGALRARTTSLALGCVLAIVAAMGCAF 60 +PSPATTWLHVSGYRFLLRRIECALLFGDVCAATGALRARTTSLALGCVLAIVAAMGCAF Sbjct 1 MPSPATTWLHVSGYRFLLRRIECALLFGDVCAATGALRARTTSLALGCVLAIVAAMGCAF 60 Query 61 VALLRPQSALGQAPIVMGRESGALYVRVDDVWHPVLNLASARLIAATNANPQPVSESELG 120 VALLRPQSALGQAPIVMGRESGALYVRVDDVWHPVLNLASARLIAATNANPQPVSESELG Sbjct 61 VALLRPQSALGQAPIVMGRESGALYVRVDDVWHPVLNLASARLIAATNANPQPVSESELG 120 Query 121 HTKRGPLLGIPGAPQLLDQPLAGAESAWAICDSDNGGSTTVVVGPAEDSSAQVLTAEQMI 180 HTKRGPLLGIPGAPQLLDQPLAGAESAWAICDSDNGGSTTVVVGPAEDSSAQVLTAEQMI Sbjct 121 HTKRGPLLGIPGAPQLLDQPLAGAESAWAICDSDNGGSTTVVVGPAEDSSAQVLTAEQMI 180 Query 181 LVATESGSPTYLLYGGRRAVVDLADPAVVWALRLQGRVPHVVAQSLLNAVPEAPRITAPR 240 LVATESGSPTYLLYGGRRAVVDLADPAVVWALRLQGRVPHVVAQSLLNAVPEAPRITAPR Sbjct 181 LVATESGSPTYLLYGGRRAVVDLADPAVVWALRLQGRVPHVVAQSLLNAVPEAPRITAPR 240 Query 241 IRGGGRASVGLPGFLVGGVVRITRASGDEYYVVLEDGVQRIGQVAADLLRFGDSQGSVNV 300 IRGGGRASVGLPGFLVGGVVRITRASGDEYYVVLEDGVQRIGQVAADLLRFGDSQGSVNV Sbjct 241 IRGGGRASVGLPGFLVGGVVRITRASGDEYYVVLEDGVQRIGQVAADLLRFGDSQGSVNV 300 Query 301 PTVAPDVIRVAPIVNTLPVSAFPDRPPTPVDGSPGRAVTTLCVTWTPAQPGAARVAFLAG 360 PTVAPDVIRVAPIVNTLPVSAFPDRPPTPVDGSPGRAVTTLCVTWTPAQP AARVAFLAG Sbjct 301 PTVAPDVIRVAPIVNTLPVSAFPDRPPTPVDGSPGRAVTTLCVTWTPAQPDAARVAFLAG 360 Query 361 SGPPVPLGGVPVTLAQADGRGPALDAVYLPPGRSAYVAARSLSGGGTGTRYLVTDTGVRF 420 SGPPVPLGGVPVTLAQADGRGPALDAVYLPPGRSAYVAARSLSGGGTGTRYLVTDTGVRF Sbjct 361 SGPPVPLGGVPVTLAQADGRGPALDAVYLPPGRSAYVAARSLSGGGTGTRYLVTDTGVRF 420 Query 421 AIHDDDVAHDLGLPTAAIPAPWPVLATLPSGPELSRANASVARDTVAPGP 470 AIHDDDVAHDLGLPTAAIPAPWPVLATLPSGPELSRANASVARDTVAPGP Sbjct 421 AIHDDDVAHDLGLPTAAIPAPWPVLATLPSGPELSRANASVARDTVAPGP 470 >gi|340628421|ref|YP_004746873.1| hypothetical protein MCAN_34671 [Mycobacterium canettii CIPT 140010059] gi|340006611|emb|CCC45798.1| putative conserved membrane protein [Mycobacterium canettii CIPT 140010059] Length=470 Score = 902 bits (2332), Expect = 0.0, Method: Compositional matrix adjust. Identities = 463/470 (99%), Positives = 464/470 (99%), Gaps = 0/470 (0%) Query 1 VPSPATTWLHVSGYRFLLRRIECALLFGDVCAATGALRARTTSLALGCVLAIVAAMGCAF 60 +PSPATTWLHVSGYRFLLRRIECALLFGDVCAATGALRARTTSLALGCVLAIVAAMGC F Sbjct 1 MPSPATTWLHVSGYRFLLRRIECALLFGDVCAATGALRARTTSLALGCVLAIVAAMGCTF 60 Query 61 VALLRPQSALGQAPIVMGRESGALYVRVDDVWHPVLNLASARLIAATNANPQPVSESELG 120 VALLRPQSALGQAPIVMGRESGALYVRVDDVWHPVLNLASARLIAATNANPQPVSESELG Sbjct 61 VALLRPQSALGQAPIVMGRESGALYVRVDDVWHPVLNLASARLIAATNANPQPVSESELG 120 Query 121 HTKRGPLLGIPGAPQLLDQPLAGAESAWAICDSDNGGSTTVVVGPAEDSSAQVLTAEQMI 180 HTKRGPLLGIPGAPQLLDQPLAGAESAWAICDSDNGGSTTVVVGPAEDSSAQVLTAEQMI Sbjct 121 HTKRGPLLGIPGAPQLLDQPLAGAESAWAICDSDNGGSTTVVVGPAEDSSAQVLTAEQMI 180 Query 181 LVATESGSPTYLLYGGRRAVVDLADPAVVWALRLQGRVPHVVAQSLLNAVPEAPRITAPR 240 LVATESGSPTYLLYGGRRAVVDLADPAVVWALRLQGRVPHVVAQSLLNAVPEAPRITAPR Sbjct 181 LVATESGSPTYLLYGGRRAVVDLADPAVVWALRLQGRVPHVVAQSLLNAVPEAPRITAPR 240 Query 241 IRGGGRASVGLPGFLVGGVVRITRASGDEYYVVLEDGVQRIGQVAADLLRFGDSQGSVNV 300 IRGGGRASVGLPGFLVG VVRITRASGDEYY VLEDGVQRIGQVAADLLRFGDSQGSVNV Sbjct 241 IRGGGRASVGLPGFLVGSVVRITRASGDEYYAVLEDGVQRIGQVAADLLRFGDSQGSVNV 300 Query 301 PTVAPDVIRVAPIVNTLPVSAFPDRPPTPVDGSPGRAVTTLCVTWTPAQPGAARVAFLAG 360 PTVAPDVIRVAPIVNTLPVSAFPDRPPTPVD SPGRAVTTLCVTWTPAQPG ARVAFLAG Sbjct 301 PTVAPDVIRVAPIVNTLPVSAFPDRPPTPVDSSPGRAVTTLCVTWTPAQPGVARVAFLAG 360 Query 361 SGPPVPLGGVPVTLAQADGRGPALDAVYLPPGRSAYVAARSLSGGGTGTRYLVTDTGVRF 420 SGPPVP GGVPVTLAQADGRGPALDAVYLPPGRSAYVAARSLSGGGTGTRYLVTDTGVRF Sbjct 361 SGPPVPFGGVPVTLAQADGRGPALDAVYLPPGRSAYVAARSLSGGGTGTRYLVTDTGVRF 420 Query 421 AIHDDDVAHDLGLPTAAIPAPWPVLATLPSGPELSRANASVARDTVAPGP 470 AIHDDDVAHDLGLPTAAIPAPWPVLATLPSGPELSRANASVARDTVAPGP Sbjct 421 AIHDDDVAHDLGLPTAAIPAPWPVLATLPSGPELSRANASVARDTVAPGP 470 >gi|298526935|ref|ZP_07014344.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A] gi|298496729|gb|EFI32023.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A] Length=483 Score = 878 bits (2268), Expect = 0.0, Method: Compositional matrix adjust. Identities = 454/471 (97%), Positives = 458/471 (98%), Gaps = 1/471 (0%) Query 1 VPSPATTWLHVSGYRFLLRRIECALLFGDVCAATGALRARTTSLALGCVLAIVAAMGCAF 60 VPSPATTWLHVSGYRFLLRRIECALLFGDVCAATGALRARTTSLALGCVLAIVAAMGCAF Sbjct 13 VPSPATTWLHVSGYRFLLRRIECALLFGDVCAATGALRARTTSLALGCVLAIVAAMGCAF 72 Query 61 VALLRPQSALGQAPIVMGRESGALYVRVDDVWHPVLNLASARLIAATNANPQP-VSESEL 119 VALLRPQSALGQAPIVMGRESGALYVRVDDVWHPVLNLA+AR + + +SEL Sbjct 73 VALLRPQSALGQAPIVMGRESGALYVRVDDVWHPVLNLATARFFFFFFFSTRTGCPKSEL 132 Query 120 GHTKRGPLLGIPGAPQLLDQPLAGAESAWAICDSDNGGSTTVVVGPAEDSSAQVLTAEQM 179 GHTKRGPLLGIPGAPQLLDQPLAGAESAW ICDSDNGGSTTVVVGPAEDSSAQVLTAEQM Sbjct 133 GHTKRGPLLGIPGAPQLLDQPLAGAESAWTICDSDNGGSTTVVVGPAEDSSAQVLTAEQM 192 Query 180 ILVATESGSPTYLLYGGRRAVVDLADPAVVWALRLQGRVPHVVAQSLLNAVPEAPRITAP 239 ILVATESGSPTYLLYGGRRAVVDLADPAVVWALRLQGRVPHVVAQSLLNAVPEAPRITAP Sbjct 193 ILVATESGSPTYLLYGGRRAVVDLADPAVVWALRLQGRVPHVVAQSLLNAVPEAPRITAP 252 Query 240 RIRGGGRASVGLPGFLVGGVVRITRASGDEYYVVLEDGVQRIGQVAADLLRFGDSQGSVN 299 RIRGGGRASVGLPGFLVGGVVRITRASGDEYYVVLEDGVQRIGQVAADLLRFGDSQGSVN Sbjct 253 RIRGGGRASVGLPGFLVGGVVRITRASGDEYYVVLEDGVQRIGQVAADLLRFGDSQGSVN 312 Query 300 VPTVAPDVIRVAPIVNTLPVSAFPDRPPTPVDGSPGRAVTTLCVTWTPAQPGAARVAFLA 359 VPTVAPDVIRVAPIVNTLPVSAFPDRPPTPVDGSPGRAVTTLCVTWTPAQPGAARVAFLA Sbjct 313 VPTVAPDVIRVAPIVNTLPVSAFPDRPPTPVDGSPGRAVTTLCVTWTPAQPGAARVAFLA 372 Query 360 GSGPPVPLGGVPVTLAQADGRGPALDAVYLPPGRSAYVAARSLSGGGTGTRYLVTDTGVR 419 GSGPPVPLGGVPVTLAQADGRGPALDAVYLPPGRSAYVAARSLSGGGTGTRYLVTDTGVR Sbjct 373 GSGPPVPLGGVPVTLAQADGRGPALDAVYLPPGRSAYVAARSLSGGGTGTRYLVTDTGVR 432 Query 420 FAIHDDDVAHDLGLPTAAIPAPWPVLATLPSGPELSRANASVARDTVAPGP 470 FAIHDDDVAHDLGLPTAAIPAPWPVLATLPSGPELSRANASVARDTVAPGP Sbjct 433 FAIHDDDVAHDLGLPTAAIPAPWPVLATLPSGPELSRANASVARDTVAPGP 483 >gi|183981119|ref|YP_001849410.1| hypothetical protein MMAR_1099 [Mycobacterium marinum M] gi|183174445|gb|ACC39555.1| conserved hypothetical membrane protein [Mycobacterium marinum M] Length=502 Score = 525 bits (1351), Expect = 8e-147, Method: Compositional matrix adjust. Identities = 300/474 (64%), Positives = 334/474 (71%), Gaps = 12/474 (2%) Query 2 PSPATTWLHVSGYRFLLRRIECALLFGDVCAATGALRARTTSLALGCVLAIVAAMGCAFV 61 P TTWL VS YRFL+RR+ECALL G + A G RA SLA GCVL++V +GC Sbjct 11 PGRPTTWLQVSAYRFLVRRLECALLRGGLDPADGRPRASAVSLAAGCVLSVVVLVGCVIS 70 Query 62 ALLRPQSALGQAPIVMGRESGALYVRVDDVWHPVLNLASARLIAATNANPQPVSESELGH 121 ALLRPQ LG A IV+GRESGALYVRV D WHPVLNLASARLIA T ANP+PV E+E+ Sbjct 71 ALLRPQVGLGDAQIVVGRESGALYVRVGDTWHPVLNLASARLIAGTGANPKPVREAEVIR 130 Query 122 TKRGPLLGIPGAPQLLDQPLAGAESAWAICDSDNGGSTTVVVGPAEDSSAQVLTAEQMIL 181 KRGPLLGIPGAPQ + Q L ESAW ICD+D G +TT++VG S + L AEQ IL Sbjct 131 AKRGPLLGIPGAPQFVGQSLPVQESAWTICDTDRGAATTLLVGRPAQQSVRRLVAEQTIL 190 Query 182 VATESGSPTYLLYGGRRAVVDLADPAVVWALRLQGRVPHVVAQSLLNAVPEAPRITAPRI 241 VATESGSP YLLY G RAVVDLADPAV ALRL+GR P+ V++SLL+AVPE P I+A RI Sbjct 191 VATESGSPAYLLYDGHRAVVDLADPAVRRALRLEGRTPYRVSRSLLSAVPEVPPISALRI 250 Query 242 RGGGR-ASVGLPGFLVGGVVRITRASGDEYYVVLEDGVQRIGQVAADLLRFGDSQGSVNV 300 G A G GF VG V+ IT G YYVVL GVQRIGQVAADLLRF DSQG+ N Sbjct 251 GHAGEPALAGKLGFSVGTVLSITAGGGAAYYVVLAQGVQRIGQVAADLLRFSDSQGAANA 310 Query 301 PTVAPDVIRVAPIVNTLPVSAFPDRPPTPVDGSPGRAVTTLCVTWTPAQPGAARVAFLAG 360 VAPDVIR APIV TLPV+ +PD P+D TTLC++W VAFLAG Sbjct 311 IAVAPDVIRAAPIVETLPVTGYPDTMSEPLDA----GATTLCLSWVSGHASRPDVAFLAG 366 Query 361 SGPPVPLGGVPVTLAQADGRGPALDAVYLPPGRSAYVAARSLSGGGT--GTRYLVTDTGV 418 G PVP G + L QADGRGPALDAVYLPPGRSAYV +R LSG G G RYLVTD GV Sbjct 367 DGLPVPAGARALPLVQADGRGPALDAVYLPPGRSAYVTSRGLSGSGAPLGRRYLVTDAGV 426 Query 419 RFAIHDDDVAHDLGL--PTAAIPAPWPVLATLPSGPELSRANASVARDTVAPGP 470 R+ I D+D A LGL PTA APWP+LATLP GPELS ANASVA D VA P Sbjct 427 RYLIRDEDTARHLGLLTPTA---APWPMLATLPEGPELSGANASVAYDVVAVDP 477 >gi|118616632|ref|YP_904964.1| hypothetical protein MUL_0857 [Mycobacterium ulcerans Agy99] gi|118568742|gb|ABL03493.1| conserved hypothetical membrane protein [Mycobacterium ulcerans Agy99] Length=502 Score = 525 bits (1351), Expect = 8e-147, Method: Compositional matrix adjust. Identities = 300/474 (64%), Positives = 335/474 (71%), Gaps = 12/474 (2%) Query 2 PSPATTWLHVSGYRFLLRRIECALLFGDVCAATGALRARTTSLALGCVLAIVAAMGCAFV 61 P TTWL VS YRFL+RR+ECALL G + A G RA SLA GCVL++V +GC Sbjct 11 PGRPTTWLQVSAYRFLVRRLECALLRGGLDPADGRPRASAVSLAAGCVLSVVVLVGCVIS 70 Query 62 ALLRPQSALGQAPIVMGRESGALYVRVDDVWHPVLNLASARLIAATNANPQPVSESELGH 121 ALLRPQ LG A IV+GRESGALYVRV D WHPVLNLASARLIA T ANP+PV E+E+ Sbjct 71 ALLRPQVGLGDAQIVVGRESGALYVRVGDTWHPVLNLASARLIAGTGANPKPVREAEVIR 130 Query 122 TKRGPLLGIPGAPQLLDQPLAGAESAWAICDSDNGGSTTVVVGPAEDSSAQVLTAEQMIL 181 KRGPLLGIPGAPQ + Q L ESAW ICD+D G +TT++VG S + L AEQ IL Sbjct 131 VKRGPLLGIPGAPQFVGQSLPVQESAWTICDTDRGAATTLLVGRPAQQSVRRLVAEQTIL 190 Query 182 VATESGSPTYLLYGGRRAVVDLADPAVVWALRLQGRVPHVVAQSLLNAVPEAPRITAPRI 241 VATESGSP YLLY G RAVVDLADPAV ALRL+GR P+ V++SLL+AVPE P I+ RI Sbjct 191 VATESGSPAYLLYDGHRAVVDLADPAVRRALRLEGRTPYRVSRSLLSAVPEVPPISVLRI 250 Query 242 RGGGR-ASVGLPGFLVGGVVRITRASGDEYYVVLEDGVQRIGQVAADLLRFGDSQGSVNV 300 G A G GF VG V+ IT G YYVVL GVQRIGQVAADLLRF DSQG+ N Sbjct 251 GHAGEPALAGKLGFSVGTVLSITAGGGAAYYVVLAQGVQRIGQVAADLLRFSDSQGAANA 310 Query 301 PTVAPDVIRVAPIVNTLPVSAFPDRPPTPVDGSPGRAVTTLCVTWTPAQPGAARVAFLAG 360 VAPDVIR APIV TLPV+ +PD P+D VTTLC++W VAFLAG Sbjct 311 IAVAPDVIRAAPIVETLPVTGYPDTVSEPLDA----GVTTLCLSWVSRHASRPDVAFLAG 366 Query 361 SGPPVPLGGVPVTLAQADGRGPALDAVYLPPGRSAYVAARSLSGGGT--GTRYLVTDTGV 418 G PVP G + L QADGRGPALDAVYLPPGRSAYV +R LSG G G RYLVTD GV Sbjct 367 DGLPVPAGARALPLVQADGRGPALDAVYLPPGRSAYVTSRGLSGSGAPLGRRYLVTDAGV 426 Query 419 RFAIHDDDVAHDLGL--PTAAIPAPWPVLATLPSGPELSRANASVARDTVAPGP 470 R+ IHD+D A LGL PTA APWP+LATLP GPELS A+ASVA D VA P Sbjct 427 RYLIHDEDTARHLGLLTPTA---APWPMLATLPEGPELSGASASVAYDVVAVDP 477 >gi|240167791|ref|ZP_04746450.1| hypothetical protein MkanA1_00645 [Mycobacterium kansasii ATCC 12478] Length=463 Score = 516 bits (1329), Expect = 3e-144, Method: Compositional matrix adjust. Identities = 297/471 (64%), Positives = 346/471 (74%), Gaps = 12/471 (2%) Query 1 VPSPATTWLHVSGYRFLLRRIECALLFGDVCAATGALRARTTSLALGCVLAIVAAMGCAF 60 +P ++ HV+ YRFLLRR+EC LL D ALRA T +LA+GCVLA VAA CA Sbjct 1 MPGQSSAGRHVNAYRFLLRRLECVLLHRD---GDRALRAPTLALAVGCVLATVAAAACAM 57 Query 61 VALLRPQSALGQAPIVMGRESGALYVRVDDVWHPVLNLASARLIAATNANPQPVSESELG 120 A+++PQ LG A IVMGR++GALYVRV D WHPVLNLASARLIAA++ANP+ V E+EL Sbjct 58 GAVMQPQPGLGDAHIVMGRDTGALYVRVGDTWHPVLNLASARLIAASDANPRRVRETELR 117 Query 121 HTKRGPLLGIPGAPQLLDQPLAGAESAWAICDSDNGGSTTVVVGPAEDSSAQVLTAEQMI 180 HTKRGPLLGIPGAPQL+ L AES W +CD+D G +TTV+VGP +SS + L AEQ + Sbjct 118 HTKRGPLLGIPGAPQLIGPSLTAAESRWTVCDTDRGEATTVLVGPVAESSVRRLAAEQTL 177 Query 181 LVATESGSPTYLLYGGRRAVVDLADPAVVWALRLQGRVPHVVAQSLLNAVPEAPRITAPR 240 LV SG+P +LL+ GRRAVVDLAD AV+ ALRL+GR P VV+QSLL+AVPE P ITAP Sbjct 178 LVTVGSGTPAFLLFDGRRAVVDLADSAVLRALRLEGRTPRVVSQSLLSAVPEVPSITAPP 237 Query 241 IRGGGRASVGLPGFLVGGVVRITRASGDEYYVVLEDGVQRIGQVAADLLRFGDSQGSVNV 300 I G G+ GF VG V+ ITR G+E+YVVL+ GVQR+G+VAADLLRF DS G+V+V Sbjct 238 ISHAGER--GIAGFSVGTVLSITRDGGEEFYVVLKTGVQRVGRVAADLLRFSDSHGNVHV 295 Query 301 PTVAPDVIRVAPIVNTLPVSAFPDRPPTPVDGSPGRAVTTLCVTWTPAQPGAARVAFLAG 360 VAPDVIR A + + LP+S FPD TP D TTLCVTW PAQ G +AFL G Sbjct 296 VAVAPDVIRSAKVADILPLSTFPDEVGTPRDDRD----TTLCVTWLPAQSGRPDLAFLTG 351 Query 361 SGPPVPLGGVPVTLAQADGRGPALDAVYLPPGRSAYVAARSLSGGGTGT--RYLVTDTGV 418 SG P+P PVTLAQADGRGPALDAVYLP GRSAY AARSLSG T RYLVTDTGV Sbjct 352 SGLPLPAAAAPVTLAQADGRGPALDAVYLPAGRSAYAAARSLSGADARTVWRYLVTDTGV 411 Query 419 RFAIHDDDVAHDLGLPTAAIPAPWPVLATLPSGPELSRANASVARDTVAPG 469 RFAI DD+ A LGLP A +PAPWP+LA LP GPEL R AS+ DTVA G Sbjct 412 RFAIRDDEAARHLGLP-APVPAPWPILAALPQGPELGRQQASIPHDTVAAG 461 >gi|296168690|ref|ZP_06850439.1| MPSS family PPE41 protein secretion system protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295896599|gb|EFG76240.1| MPSS family PPE41 protein secretion system protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length=453 Score = 505 bits (1301), Expect = 6e-141, Method: Compositional matrix adjust. Identities = 293/465 (64%), Positives = 342/465 (74%), Gaps = 19/465 (4%) Query 7 TWLHVSGYRFLLRRIECALLFGDVCAATGALRARTTSLALGCVLAIVAAMGCAFVALLRP 66 TWLHVSG RFLLRR+ECALL GD+ + R +T +LA+GCVLA +A G A +ALLRP Sbjct 7 TWLHVSGRRFLLRRVECALLGGDIHTLSARSRTQTAALAVGCVLASIAVAGAALLALLRP 66 Query 67 QSALGQAPIVMGRESGALYVRVDDVWHPVLNLASARLIAATNANPQPVSESELGHTKRGP 126 + L P+VMGRESGALYVRV D WHPVLNLASARLIAAT ANP+PV E++L KRGP Sbjct 67 RVPLDGVPLVMGRESGALYVRVGDTWHPVLNLASARLIAATAANPRPVPEADLARAKRGP 126 Query 127 LLGIPGAPQLLDQPLAGAESAWAICDSDNGGSTTVVVGPAEDSSAQVLTAEQMILVATES 186 LLGIPGAPQL+ QPL ++AW ICD+ G+TTV+VG +D++A L Q +L A S Sbjct 127 LLGIPGAPQLIGQPLTADDTAWTICDTGGAGTTTVIVGRTDDAAAAPLRTGQAVLAAAGS 186 Query 187 GSPTYLLYGGRRAVVDLADPAVVWALRLQGRVPHVVAQSLLNAVPEAPRITAPRIRGGGR 246 SP +LLY G+RAVVD+ D AVV ALRL+GR P V+QSLLNA+PEAP I AP IRG G Sbjct 187 RSPVFLLYDGQRAVVDVTDTAVVRALRLEGRSPVAVSQSLLNAIPEAPPIRAPWIRGAGE 246 Query 247 ASVGLPGFLVGGVVRITRASGDEYYVVLEDGVQRIGQVAADLLRFGDSQGSVNVPTVAPD 306 + LPGF VG VVRI ++ GDEYY VL DGVQRIGQVAADLLRFG+S+G+ VAPD Sbjct 247 RAPALPGFAVGSVVRIMQSGGDEYYAVLADGVQRIGQVAADLLRFGNSRGTATAVAVAPD 306 Query 307 VIRVAPIVNTLPVSAFPDRPPTPV-DGSPGRAVTTLCVTWTPAQPGAARVAFLAGSGPPV 365 IR A IV++LPV+AFPDR P V DG LCV+W A PG V LAGS P+ Sbjct 307 AIRAARIVDSLPVAAFPDRAPGLVGDGG------ALCVSWRAATPG---VTLLAGSRLPL 357 Query 366 PLGGVPVTLAQADGRGPALDAVYLPPGRSAYVAARSLSGGGTGTRYLVTDTGVRFAIHDD 425 P GG PVTLAQADG GPALDAVY+PPGRSA+ A G RYLVTDTGVRF +HDD Sbjct 358 PAGGAPVTLAQADGHGPALDAVYVPPGRSAHARA--------GARYLVTDTGVRFPVHDD 409 Query 426 DVAHDLGLPTAAIPAPWPVLATLPSGPELSRANASVARDTVAPGP 470 + AHDLGLP A +PAPWP+L TLP+GPEL R AS+ARD+VA P Sbjct 410 NAAHDLGLP-APVPAPWPILRTLPAGPELGREQASIARDSVAGCP 453 >gi|254819226|ref|ZP_05224227.1| hypothetical protein MintA_04831 [Mycobacterium intracellulare ATCC 13950] Length=457 Score = 485 bits (1248), Expect = 9e-135, Method: Compositional matrix adjust. Identities = 281/471 (60%), Positives = 331/471 (71%), Gaps = 15/471 (3%) Query 1 VPSPATTWLHVSGYRFLLRRIECALLFGDVCAATG-ALRARTTSLALGCVLAIVAAMGCA 59 +P TTWL VS +R+L+RR ECALL G+ TG R + SLA GCV ++A GCA Sbjct 1 MPRQPTTWLRVSAHRYLVRRTECALL-GEAIYPTGPQARMPSASLAAGCVFTVLALAGCA 59 Query 60 FVALLRPQSALGQAPIVMGRESGALYVRVDDVWHPVLNLASARLIAATNANPQPVSESEL 119 + LL P AL +A IVM R+SGAL+VRV DVWHPV NLASARLIA T A+PQP+ E++L Sbjct 60 LLGLLSPHVALDRAQIVMSRDSGALFVRVGDVWHPVPNLASARLIAGTAADPQPIREADL 119 Query 120 GHTKRGPLLGIPGAPQLLDQPLAGAESAWAICDSDNGGSTTVVVGPAEDSSAQVLTAEQM 179 KRGPLLGIPGAPQ + +PL E A+++CDSD+ STTV+VGP D+ + Q Sbjct 120 ERAKRGPLLGIPGAPQFVGRPLPAQELAFSMCDSDDASSTTVIVGPVADNGVTRMPPGQA 179 Query 180 ILVATESGSPTYLLYGGRRAVVDLADPAVVWALRLQGRVPHVVAQSLLNAVPEAPRITAP 239 +L A SGSP YLLY G RA+VDL D AVV ALRL+G P +V+Q+LLNA+PEAP I+AP Sbjct 180 VLAAVSSGSPAYLLYDGHRAIVDLEDAAVVRALRLEGHAPRLVSQALLNAMPEAPPISAP 239 Query 240 RIRGGGRASVGLPGFLVGGVVRITRASGDEYYVVLEDGVQRIGQVAADLLRFGDSQGSVN 299 RIRG G A+ GL GF VG V+R+TRA GDEYY VL DGVQRIGQVAADL+RF SQG+V+ Sbjct 240 RIRGLGGAAPGLAGFRVGSVLRVTRADGDEYYAVLADGVQRIGQVAADLMRFSSSQGTVS 299 Query 300 VPTVAPDVIRVAPIVNTLPVSAFPDRPPTPVDGSPGRAVTTLCVTWTPAQPGAARVAFLA 359 TVAP IR AP+V LPV+ FPDR PT + A TLC +W + G VA LA Sbjct 300 PITVAPAAIRAAPVVAELPVAGFPDRAPTLPE-----AAGTLCASWAGGRAG---VALLA 351 Query 360 GSGPPVPLGGVPVTLAQADGRGPALDAVYLPPGRSAYVAARSLSGGGTGTRYLVTDTGVR 419 G PVP G VTLAQADGRGPALDA Y+P GRSAYV A G GTRYL+ DTGVR Sbjct 352 GGRLPVPPGQAAVTLAQADGRGPALDAAYVPTGRSAYVRA----GDKAGTRYLIVDTGVR 407 Query 420 FAIHDDDVAHDLGLPTAAIPAPWPVLATLPSGPELSRANASVARDTVAPGP 470 FAI DDD A DLGL + PAPW +L LP+GPELSR AS+ARD VA P Sbjct 408 FAIPDDDAARDLGL-SGPTPAPWSILTLLPAGPELSRRGASIARDAVAGSP 457 >gi|342861875|ref|ZP_08718520.1| hypothetical protein MCOL_23415 [Mycobacterium colombiense CECT 3035] gi|342130692|gb|EGT83996.1| hypothetical protein MCOL_23415 [Mycobacterium colombiense CECT 3035] Length=455 Score = 466 bits (1198), Expect = 5e-129, Method: Compositional matrix adjust. Identities = 286/473 (61%), Positives = 327/473 (70%), Gaps = 21/473 (4%) Query 1 VPSPATTWLHVSGYRFLLRRIECALLFGDVCAATGALRARTTSLALGCVLAIVAAMGCAF 60 +P TWLHVS YR+LLRR E ALL AA R+ +ALGCV A VA GCA Sbjct 1 MPRQPATWLHVSAYRYLLRRTERALLRE---AAGLPTHPRSGPVALGCVAAAVAMAGCAV 57 Query 61 VALLRPQSALGQAPIVMGRESGALYVRVDDVWHPVLNLASARLIAATNANPQPVSESELG 120 + LLRP AL +A IV+ RESGAL+VRV DVWHPVLNLASARLIAAT A+PQPV ES LG Sbjct 58 LGLLRPHVALDRAQIVVSRESGALFVRVGDVWHPVLNLASARLIAATAADPQPVPESALG 117 Query 121 HTKRGPLLGIPGAPQLLDQPLAGAESAWAICDSDNGGSTTVVVGP-AEDSSAQVLTAEQM 179 TKRGPLLGIPGAPQ L +PL+ + W+IC S +TTV+VG +E + + Sbjct 118 ATKRGPLLGIPGAPQFLGRPLSVGDMGWSICASTGASTTTVIVGRRSEGPAVHPVPEGHA 177 Query 180 ILVATESGSPTYLLYGGRRAVVDLADPAVVWALRLQGRVPHVVAQSLLNAVPEAPRITAP 239 IL A SGSP YLLY G RA+VDL D AVV ALR++GR P VAQ+LLNAVPEAP I P Sbjct 178 ILAAPPSGSPAYLLYDGHRAMVDLDDAAVVRALRIEGRAPLPVAQALLNAVPEAPPIAPP 237 Query 240 RIRGGGRASVGLPGFLVGGVVRITRASGDEYYVVLEDGVQRIGQVAADLLRFGDSQGSVN 299 R+RG G A+ GLPGF VG V+RITRA GDE+Y VL GVQRIG+VAADLLR + QG+ N Sbjct 238 RLRGRGGAAPGLPGFAVGSVLRITRADGDEFYAVLATGVQRIGRVAADLLRLRNPQGTAN 297 Query 300 VPTVAPDVIRVAPIVNTLPVSAFPDRPPT--PVDGSPGRAVTTLCVTWTPAQPGAARVAF 357 TVAPD IR AP+V LPV+ FPDR PT P G TLC W A+ G V Sbjct 298 PVTVAPDAIRAAPVVAELPVALFPDRAPTLAPPAG-------TLCAGWEEARTG---VTL 347 Query 358 LAGSGPPVPLGGVPVTLAQADGRGPALDAVYLPPGRSAYVAARSLSGGGTGTRYLVTDTG 417 LA + P+P PV LAQADG GPALDAVY+PPG SAYV A G GTRYL+ DTG Sbjct 348 LAENALPIPPDRTPVALAQADGDGPALDAVYVPPGTSAYVRA----GDEAGTRYLIADTG 403 Query 418 VRFAIHDDDVAHDLGLPTAAIPAPWPVLATLPSGPELSRANASVARDTVAPGP 470 VRFA+HDD AHDLGL A PAPWP+L+ LP+GPELSR NAS+ARD VA P Sbjct 404 VRFAVHDDAAAHDLGLGDAG-PAPWPLLSLLPAGPELSRQNASIARDAVARSP 455 >gi|254776825|ref|ZP_05218341.1| hypothetical protein MaviaA2_19461 [Mycobacterium avium subsp. avium ATCC 25291] Length=456 Score = 456 bits (1174), Expect = 3e-126, Method: Compositional matrix adjust. Identities = 275/470 (59%), Positives = 329/470 (70%), Gaps = 14/470 (2%) Query 1 VPSPATTWLHVSGYRFLLRRIECALLFGDVCAATGALRARTTSLALGCVLAIVAAMGCAF 60 +P TTWL VS YR+L RR+ECALL D A R + +LA G VL A Sbjct 1 MPRRPTTWLQVSAYRYLSRRLECALLGHDPAVAGMRARGQPAALAAGAVLTAAALAAATL 60 Query 61 VALLRPQSALGQAPIVMGRESGALYVRVDDVWHPVLNLASARLIAATNANPQPVSESELG 120 + LLRP AL A +V+ R+SGAL+VRV D WHPVLNLASARLIAA+ +P + +++L Sbjct 61 LGLLRPHVALDGARVVLARDSGALFVRVGDTWHPVLNLASARLIAASAVDPLTIRQADLD 120 Query 121 HTKRGPLLGIPGAPQLLDQPLAGAESAWAICDSDNGGSTTVVVGPAEDSSAQVLTAEQMI 180 +KRGPLLGIPGAP L +PLA A++AW++CDSD G+TT+++G + +S +VL Q + Sbjct 121 GSKRGPLLGIPGAPAFLGRPLAAADTAWSLCDSDGAGATTILLGRTDAASMRVLGGGQAM 180 Query 181 LVATESGSPTYLLYGGRRAVVDLADPAVVWALRLQGRVPHVVAQSLLNAVPEAPRITAPR 240 LVA +GSP YLL+ G RA VDLAD AVV LRL+GR P +V+QSLL AVPEA I PR Sbjct 181 LVAAAAGSPAYLLHDGHRARVDLADAAVVRTLRLEGRAPRLVSQSLLEAVPEAAPIAVPR 240 Query 241 IRGGGRASVGLPGFLVGGVVRITRASGDEYYVVLEDGVQRIGQVAADLLRFGDSQGSVNV 300 I G G A+ GLPGF +G V+RITRA GDEYY VL GVQRIG+VAADLLR + QGS + Sbjct 241 IPGLGGAAPGLPGFAIGTVLRITRADGDEYYAVLAGGVQRIGRVAADLLRLSNPQGSADA 300 Query 301 PTVAPDVIRVAPIVNTLPVSAFPDRPPTPVDGSPGRAVTTLCVTWTPAQPGAARVAFLAG 360 TVAPD +R AP+V LPV+ FPDR PT + + T+C W A+ VAFL G Sbjct 301 VTVAPDALRTAPVVAALPVAGFPDRAPTVSEPA-----ATICAGWGDAR----SVAFLTG 351 Query 361 SGPPVPLGGVPVTLAQADGRGPALDAVYLPPGRSAYVAARSLSGGGTGTRYLVTDTGVRF 420 + PVP G PVTLAQADGRGPALDAVYLPPGRSAYV A G GTRYL+TDTGVRF Sbjct 352 AAVPVPPGRAPVTLAQADGRGPALDAVYLPPGRSAYVRA----GANAGTRYLITDTGVRF 407 Query 421 AIHDDDVAHDLGLPTAAIPAPWPVLATLPSGPELSRANASVARDTVAPGP 470 A+ DDD A DLGL + PAPWP+L LP+GPELSR NASVARDTVA P Sbjct 408 AVPDDDAAADLGLGQPS-PAPWPLLTLLPAGPELSRPNASVARDTVAGAP 456 >gi|41410336|ref|NP_963172.1| hypothetical protein MAP4238 [Mycobacterium avium subsp. paratuberculosis K-10] gi|41399170|gb|AAS06788.1| hypothetical protein MAP_4238 [Mycobacterium avium subsp. paratuberculosis K-10] Length=477 Score = 447 bits (1151), Expect = 1e-123, Method: Compositional matrix adjust. Identities = 274/470 (59%), Positives = 325/470 (70%), Gaps = 17/470 (3%) Query 1 VPSPATTWLHVSGYRFLLRRIECALLFGDVCAATGALRARTTSLALGCVLAIVAAMGCAF 60 VP TTWL VS YR+L RR+ECALL D AA R + +L G VL A Sbjct 25 VPRRPTTWLQVSAYRYLSRRLECALLGQDPAAAGMRARGQPAALLAGAVLTAAALAAATL 84 Query 61 VALLRPQSALGQAPIVMGRESGALYVRVDDVWHPVLNLASARLIAATNANPQPVSESELG 120 + LLRP AL A +V+ R+SGAL+VRV D WHPVLNLASARLIAA+ +P + +++L Sbjct 85 LGLLRPHVALDGARVVLARDSGALFVRVGDTWHPVLNLASARLIAASAVDPLTIRQADLD 144 Query 121 HTKRGPLLGIPGAPQLLDQPLAGAESAWAICDSDNGGSTTVVVGPAEDSSAQVLTAEQMI 180 +KRGPLLGIPGAP L +PLA AES +CDSD G+TT+++G + +S +VL Q + Sbjct 145 GSKRGPLLGIPGAPAFLGRPLAAAES---LCDSDGAGATTILLGRTDAASMRVLGGGQAM 201 Query 181 LVATESGSPTYLLYGGRRAVVDLADPAVVWALRLQGRVPHVVAQSLLNAVPEAPRITAPR 240 LVA +GSP YLL+ G RA VDLAD AVV LRL+GR P +V+QSLL+AVPEA I PR Sbjct 202 LVAAAAGSPAYLLHDGHRARVDLADAAVVRTLRLEGRAPRLVSQSLLDAVPEAAPIAVPR 261 Query 241 IRGGGRASVGLPGFLVGGVVRITRASGDEYYVVLEDGVQRIGQVAADLLRFGDSQGSVNV 300 I G G A+ GLPGF +G V+RI RA GDEYY VL GVQRIG+VAADLLR + QGS + Sbjct 262 IPGLGGAAPGLPGFAIGTVLRIIRADGDEYYAVLAGGVQRIGRVAADLLRLSNPQGSADA 321 Query 301 PTVAPDVIRVAPIVNTLPVSAFPDRPPTPVDGSPGRAVTTLCVTWTPAQPGAARVAFLAG 360 TVAPD +R AP+V LPV+ FPDR PT + + T+C W A+ VAFL G Sbjct 322 VTVAPDALRTAPVVAALPVAGFPDRAPTVSEPA-----ATICAGWGDAR----SVAFLTG 372 Query 361 SGPPVPLGGVPVTLAQADGRGPALDAVYLPPGRSAYVAARSLSGGGTGTRYLVTDTGVRF 420 + PVP G PVTLAQADGRGPALDAVYLPPGRSAYV A G GTRYL+TDTGVRF Sbjct 373 AAVPVPPGRAPVTLAQADGRGPALDAVYLPPGRSAYVRA----GANAGTRYLITDTGVRF 428 Query 421 AIHDDDVAHDLGLPTAAIPAPWPVLATLPSGPELSRANASVARDTVAPGP 470 A+ DDD A DLGL + PAPWP+L LP+GPELSR NASVARDTV P Sbjct 429 AVPDDDAAADLGLGQPS-PAPWPLLTLLPAGPELSRPNASVARDTVVGAP 477 >gi|118464971|ref|YP_883528.1| hypothetical protein MAV_4392 [Mycobacterium avium 104] gi|118166258|gb|ABK67155.1| conserved hypothetical protein [Mycobacterium avium 104] Length=457 Score = 447 bits (1150), Expect = 2e-123, Method: Compositional matrix adjust. Identities = 273/471 (58%), Positives = 327/471 (70%), Gaps = 15/471 (3%) Query 1 VPSPATTWLHVSGYRFLLRRIECALLFGDVCAATGALRARTTSLALGCVLAIVAAMGCAF 60 +P TTWL VS YR+L RR+ECALL D AA R + +LA G VL A Sbjct 1 MPRRPTTWLQVSAYRYLSRRLECALLGQDPAAAGMRARGQPAALAAGAVLTAAALAAATL 60 Query 61 VALLRPQSALGQAPIVMGRESGALYVRVDDVWHPVLNLASARLIAATNANPQPVSESELG 120 + LLRP AL A +V+ R+SGAL+VRV D WHPVLNLASARLIAA+ +P + +++L Sbjct 61 LGLLRPHVALDGARVVLARDSGALFVRVGDTWHPVLNLASARLIAASAVDPLTIRQADLD 120 Query 121 HTKRGPLLGIPGAPQLLDQPLAGAESAWAICDSDNGG-STTVVVGPAEDSSAQVLTAEQM 179 +KRGPLLGIPGAP L +PLA A++AW++CDSD G +TT+++G + +S +VL Q Sbjct 121 GSKRGPLLGIPGAPAFLGRPLAAADTAWSLCDSDGAGATTTILLGRPDAASMRVLGGGQA 180 Query 180 ILVATESGSPTYLLYGGRRAVVDLADPAVVWALRLQGRVPHVVAQSLLNAVPEAPRITAP 239 +LVA +GSP YLL+ G RA VDLAD AVV LRL+GR P +V+QSLL AVPEA I P Sbjct 181 MLVAAAAGSPAYLLHDGHRARVDLADAAVVRTLRLEGRAPRLVSQSLLEAVPEAAPIAVP 240 Query 240 RIRGGGRASVGLPGFLVGGVVRITRASGDEYYVVLEDGVQRIGQVAADLLRFGDSQGSVN 299 RI G G A+ GLPGF +G V+RI RA GDEYY VL GVQRIG+VAADLLR + QG + Sbjct 241 RIPGLGGAAPGLPGFAIGTVLRIIRADGDEYYAVLAGGVQRIGRVAADLLRLSNPQGGAD 300 Query 300 VPTVAPDVIRVAPIVNTLPVSAFPDRPPTPVDGSPGRAVTTLCVTWTPAQPGAARVAFLA 359 TVAPD +R AP+V LPV+ FPDR P + + T+C W A+ VAFL Sbjct 301 AVTVAPDALRTAPVVAALPVAGFPDRAPAVSEPA-----ATICAGWGDAR----SVAFLT 351 Query 360 GSGPPVPLGGVPVTLAQADGRGPALDAVYLPPGRSAYVAARSLSGGGTGTRYLVTDTGVR 419 G+ PVP G PVTLAQADGRGPALDAVYLPPGRSAYV A G GTRYL+TDTGVR Sbjct 352 GAAVPVPPGRAPVTLAQADGRGPALDAVYLPPGRSAYVRA----GANAGTRYLITDTGVR 407 Query 420 FAIHDDDVAHDLGLPTAAIPAPWPVLATLPSGPELSRANASVARDTVAPGP 470 FA+ DDD A DLGL + PAPWP+L LP+GPELSR NASVARDTVA P Sbjct 408 FAVPDDDAAADLGLGQPS-PAPWPLLTLLPAGPELSRPNASVARDTVAGAP 457 >gi|169630838|ref|YP_001704487.1| hypothetical protein MAB_3759c [Mycobacterium abscessus ATCC 19977] gi|169242805|emb|CAM63833.1| Conserved hypothetical protein [Mycobacterium abscessus] Length=493 Score = 383 bits (983), Expect = 4e-104, Method: Compositional matrix adjust. Identities = 225/476 (48%), Positives = 292/476 (62%), Gaps = 19/476 (3%) Query 6 TTWLHVSGYRFLLRRIECALLFGDVCAATGALRARTTSLALGCVLAIVAAMGCAFVALLR 65 TT L VSGYRFL+RR+E AL+ DV +R++++SL +G VLA V GCA +A R Sbjct 6 TTRLQVSGYRFLVRRMEHALVRRDVRMIHDPMRSQSSSLMVGIVLATVVVAGCAILAFFR 65 Query 66 PQSALGQAPIVMGRESGALYVRVDDVWHPVLNLASARLIAATNANPQPVSESELGHTKRG 125 P LG PIVMG+++GA+YVR+ D HP LNLASARLI+ N NP+PV +SEL +RG Sbjct 66 PNMPLGDQPIVMGKDTGAVYVRIQDTLHPALNLASARLISGNNENPKPVKDSELAKARRG 125 Query 126 PLLGIPGAPQLLDQPLAGAESAWAICD-----SDNGGSTTVVVGPAE-DSSAQVLTAEQM 179 PL+GIPGAP + L G ++ W +CD + +TTV+ G ++ Q + ++ Sbjct 126 PLVGIPGAPASIPGALTGDDTIWTVCDVATPPPSSTVTTTVIAGKVTLENGNQEMPKDRY 185 Query 180 ILVATESGSPTYLLYGGRRAVVDLADPAVVWALRLQGRVPHVVAQSLLNAVPEAPRITAP 239 LV S YLLY G+RA VDL +PAV ALRL+G P ++ ++LNA+PE P I P Sbjct 186 ALVTVNSQ--MYLLYDGKRAAVDLTNPAVTRALRLEGVTPRPISMNVLNAIPEVPAIAPP 243 Query 240 RIRGGGRAS-VGLPGFLVGGVVRITRASGDEYYVVLEDGVQRIGQVAADLLRFGDSQGSV 298 I G AS + G VG V++++RA EYYVVL GVQRI +V ADL+RF DSQG+ Sbjct 244 PIPDAGAASPITTAGVRVGSVIKMSRADSAEYYVVLAGGVQRINEVTADLIRFSDSQGAQ 303 Query 299 NVPTVAPDVIRVAPIVNTLPVSAFPDRPPTPVDGSPGRAVTTLCVTWTPAQPGA---ARV 355 + TVAPDVI P +N L V FPDR VD P ++V LC +W P Q A Sbjct 304 EIVTVAPDVIAGHPSLNLLAVQTFPDRAGKIVD-VPEKSV--LCSSWKPGQEKTQEHAST 360 Query 356 AFLAGSGPPVPLGGVPVTLAQADGRGPALDAVYLPPGRSAYVAARSLSGGGTG---TRYL 412 L GS P+ VPV LAQAD GP LD Y+PP RSA+V + L GG TG + YL Sbjct 361 KLLMGSSLPLKTDQVPVVLAQADKEGPNLDTAYIPPARSAFVRSTGL-GGDTGRAESLYL 419 Query 413 VTDTGVRFAIHDDDVAHDLGLPTAAIPAPWPVLATLPSGPELSRANASVARDTVAP 468 + DTGVRF I + + A LGL +PAPWP++ LP GP LS+ +A V D + P Sbjct 420 ILDTGVRFGIGNLEAAKALGLNVEPVPAPWPIVGLLPPGPRLSKEDALVVHDGMPP 475 >gi|120402455|ref|YP_952284.1| hypothetical protein Mvan_1444 [Mycobacterium vanbaalenii PYR-1] gi|119955273|gb|ABM12278.1| protein of unknown function DUF690 [Mycobacterium vanbaalenii PYR-1] Length=461 Score = 355 bits (911), Expect = 1e-95, Method: Compositional matrix adjust. Identities = 224/471 (48%), Positives = 285/471 (61%), Gaps = 31/471 (6%) Query 6 TTWLHVSGYRFLLRRIECALLFGDVCAATGALRARTTSLALGCVLAIVAAMGCAFVALLR 65 TT L VSG+RFL+RR+E AL+ GD LR ++ S+ G VLA++A CA +A +R Sbjct 5 TTRLQVSGHRFLMRRMEHALVRGDARMLDDPLRGQSLSMTAGAVLAVIAVTVCAVLAFIR 64 Query 66 PQSALGQAPIVMGRESGALYVRVDDVWHPVLNLASARLIAATNANPQPVSESELGHTKRG 125 P LG AP+V+ RESGA+YVR+DD HPV NLASARLI T A P+ V++ + + G Sbjct 65 PGGELGDAPLVVVRESGAMYVRIDDTMHPVFNLASARLILGTAAEPRMVTQRAVDRAEIG 124 Query 126 PLLGIPGAPQLLDQPLAGAESAWAICDSDNGGSTTVVVGPAEDSSAQVLTAEQMILVATE 185 P +GIPGAP + PL AES W +CD +G TTV GP S+ +T +LV Sbjct 125 PQVGIPGAPGQISPPLQAAESGWTVCDERSG--TTVTAGPVAGSA---MTPGASVLVTPR 179 Query 186 SGSP--TYLLYGGRRAVVDLADPAVVWALRLQGRVPHVVAQSLLNAVPEAPRITAPRIRG 243 GS TYLL+G R+ VDL PAVV ALRL G VP V+ +LL AVPEAP I+ P I Sbjct 180 GGSAALTYLLHGRWRSRVDLRHPAVVRALRLDGVVPQPVSPALLAAVPEAPAISPPHI-- 237 Query 244 GGRASVGLPG------FLVGGVVRITRASGD-EYYVVLEDGVQRIGQVAADLLRFGDSQG 296 ++G PG VG VVR + EY+VVL +G+QRIG+VAADL+R+ D + Sbjct 238 ---PALGSPGPSTLREHPVGTVVRASGTDATAEYFVVLAEGLQRIGEVAADLIRYTDRRP 294 Query 297 SVNVPTVAPDVIRVAPIVNTLPVSAFPDRPPTPVDGSPGRAVTTLCVTWTPAQ-PGAARV 355 +PTV+ D + P+V TLPV+ FPDR V +P +C W + Sbjct 295 GAEIPTVSADAVGAVPVVTTLPVTTFPDR--GGVTAAP-----VICAHWNQKNGETTSHT 347 Query 356 AFLAGSGPPVPLGGVPVTLAQADGRGPALDAVYLPPGRSAYVAARSLSGG--GTGTRYLV 413 + L P PVTL Q DG GPA+DAV +P GRS YV + SL+G GTG+ +LV Sbjct 348 SVLVADS--APRRTRPVTLVQTDGDGPAVDAVSVPAGRSVYVRSVSLTGAGHGTGSLFLV 405 Query 414 TDTGVRFAIHDDDVAHDLGLPTAAIPAPWPVLATLPSGPELSRANASVARD 464 TD GV F + DD+ A LGL A+PAPWPVLATLP GPEL R +ASV RD Sbjct 406 TDAGVLFGVRDDESAAALGLTAPAVPAPWPVLATLPRGPELGRDDASVLRD 456 >gi|119867191|ref|YP_937143.1| hypothetical protein Mkms_1140 [Mycobacterium sp. KMS] gi|126433753|ref|YP_001069444.1| hypothetical protein Mjls_1150 [Mycobacterium sp. JLS] gi|119693280|gb|ABL90353.1| protein of unknown function DUF690 [Mycobacterium sp. KMS] gi|126233553|gb|ABN96953.1| protein of unknown function DUF690 [Mycobacterium sp. JLS] Length=457 Score = 335 bits (860), Expect = 7e-90, Method: Compositional matrix adjust. Identities = 233/466 (50%), Positives = 281/466 (61%), Gaps = 25/466 (5%) Query 6 TTWLHVSGYRFLLRRIECALLFGDVCAATGALRARTTSLALGCVLAIVAAMGCAFVALLR 65 TT LHVSGYRFL+RR+E AL+ DV LR ++ +L G VLA +A GCA +A+LR Sbjct 5 TTGLHVSGYRFLMRRMEHALVRADVRMLDDPLRGQSIALVAGAVLAAIAVAGCAILAVLR 64 Query 66 PQSALGQAPIVMGRESGALYVRVDDVWHPVLNLASARLIAATNANPQPVSESELGHTKRG 125 PQ LG APIVM +SGALYVR+ D HPV NLASARL+ A P+ VS L +RG Sbjct 65 PQGGLGDAPIVMEAQSGALYVRIADTLHPVPNLASARLVVGNAAEPRTVSARALAEARRG 124 Query 126 PLLGIPGAPQLLDQPLAGAESAWAICDSDNGGSTTVVVGPAEDSSAQVLTAEQMILVATE 185 P +GI GAP ++ L E+ W +C D ST+V VGP VL ++ +LV Sbjct 125 PQVGIAGAPAVIGPVLPPQEAGWTVC--DRAESTSVAVGP---QPPGVLAGDRAVLVTAR 179 Query 186 SGSP--TYLLYGGRRAVVDLADPAVVWALRLQGRVPHVVAQSLLNAVPEAPRITAPRI-R 242 S P TYLL+ GRR+ VDL D AVV ALRL G P V+++LL+A+PE P ITAP + R Sbjct 180 SEGPAVTYLLHAGRRSAVDLRDTAVVRALRLDGVTPRPVSRALLDALPENPPITAPAVPR 239 Query 243 GGGRASVGLPGFLVGGVVRITRASGDEYYVVLEDGVQRIGQVAADLLRFGDSQGSVNVPT 302 GGR +V G VG VVR+ RA EYYVVL DGVQRIG+V ADL+RF Q S ++P Sbjct 240 AGGRGAVA--GHPVGEVVRLPRADTAEYYVVLADGVQRIGEVTADLIRFTVRQRSQDIPA 297 Query 303 VAPDVIRVAPIVNTLPVSAFPDRPPTPVDGSPGRAVTTLCVTWTPAQPGAARVAFLAGSG 362 VAPD + A V LP + PDR T LC W A G L + Sbjct 298 VAPDAVAAAGAVAPLPTATHPDRVTI-------TEPTVLCAHW--AMNGPDVTTTLVDTA 348 Query 363 PPVPLGGVPVTLAQADGRGPALDAVYLPPGRSAYV--AARSLSGGGTGTRYLVTDTGVRF 420 P + V LAQADG GP +D V LPPGRS Y + GGG RYLVTD GV F Sbjct 349 PAAAV----VELAQADGAGPNVDGVSLPPGRSVYTRPVGVTGGGGGAQPRYLVTDLGVLF 404 Query 421 AIHDDDVAHDLGLPTAAIPAPWPVLATLPSGPELSRANASVARDTV 466 + DDD A LG+ ++ +PAPWPVLA LP GPELSRA ASV RD V Sbjct 405 GVPDDDTARTLGVGSSPVPAPWPVLARLPRGPELSRAAASVTRDAV 450 >gi|108798095|ref|YP_638292.1| hypothetical protein Mmcs_1123 [Mycobacterium sp. MCS] gi|108768514|gb|ABG07236.1| protein of unknown function DUF690 [Mycobacterium sp. MCS] Length=485 Score = 335 bits (859), Expect = 1e-89, Method: Compositional matrix adjust. Identities = 233/466 (50%), Positives = 281/466 (61%), Gaps = 25/466 (5%) Query 6 TTWLHVSGYRFLLRRIECALLFGDVCAATGALRARTTSLALGCVLAIVAAMGCAFVALLR 65 TT LHVSGYRFL+RR+E AL+ DV LR ++ +L G VLA +A GCA +A+LR Sbjct 33 TTGLHVSGYRFLMRRMEHALVRADVRMLDDPLRGQSIALVAGAVLAAIAVAGCAILAVLR 92 Query 66 PQSALGQAPIVMGRESGALYVRVDDVWHPVLNLASARLIAATNANPQPVSESELGHTKRG 125 PQ LG APIVM +SGALYVR+ D HPV NLASARL+ A P+ VS L +RG Sbjct 93 PQGGLGDAPIVMEAQSGALYVRIADTLHPVPNLASARLVVGNAAEPRTVSARALAEARRG 152 Query 126 PLLGIPGAPQLLDQPLAGAESAWAICDSDNGGSTTVVVGPAEDSSAQVLTAEQMILVATE 185 P +GI GAP ++ L E+ W +C D ST+V VGP VL ++ +LV Sbjct 153 PQVGIAGAPAVIGPVLPPQEAGWTVC--DRAESTSVAVGP---QPPGVLAGDRAVLVTAR 207 Query 186 SGSP--TYLLYGGRRAVVDLADPAVVWALRLQGRVPHVVAQSLLNAVPEAPRITAPRI-R 242 S P TYLL+ GRR+ VDL D AVV ALRL G P V+++LL+A+PE P ITAP + R Sbjct 208 SEGPAVTYLLHAGRRSAVDLRDTAVVRALRLDGVTPRPVSRALLDALPENPPITAPAVPR 267 Query 243 GGGRASVGLPGFLVGGVVRITRASGDEYYVVLEDGVQRIGQVAADLLRFGDSQGSVNVPT 302 GGR +V G VG VVR+ RA EYYVVL DGVQRIG+V ADL+RF Q S ++P Sbjct 268 AGGRGAVA--GHPVGEVVRLPRADTAEYYVVLADGVQRIGEVTADLIRFTVRQRSQDIPA 325 Query 303 VAPDVIRVAPIVNTLPVSAFPDRPPTPVDGSPGRAVTTLCVTWTPAQPGAARVAFLAGSG 362 VAPD + A V LP + PDR T LC W A G L + Sbjct 326 VAPDAVAAAGAVAPLPTATHPDRVTI-------TEPTVLCAHW--AMNGPDVTTTLVDTA 376 Query 363 PPVPLGGVPVTLAQADGRGPALDAVYLPPGRSAYV--AARSLSGGGTGTRYLVTDTGVRF 420 P + V LAQADG GP +D V LPPGRS Y + GGG RYLVTD GV F Sbjct 377 PAAAV----VELAQADGAGPNVDGVSLPPGRSVYTRPVGVTGGGGGAQPRYLVTDLGVLF 432 Query 421 AIHDDDVAHDLGLPTAAIPAPWPVLATLPSGPELSRANASVARDTV 466 + DDD A LG+ ++ +PAPWPVLA LP GPELSRA ASV RD V Sbjct 433 GVPDDDTARTLGVGSSPVPAPWPVLARLPRGPELSRAAASVTRDAV 478 >gi|226365629|ref|YP_002783412.1| hypothetical protein ROP_62200 [Rhodococcus opacus B4] gi|226244119|dbj|BAH54467.1| hypothetical protein [Rhodococcus opacus B4] Length=496 Score = 311 bits (796), Expect = 2e-82, Method: Compositional matrix adjust. Identities = 203/487 (42%), Positives = 270/487 (56%), Gaps = 27/487 (5%) Query 3 SPATTWLHVSGYRFLLRRIECALLFGDVCAATGALRARTTSLALGCVLAIVAAMGCAFVA 62 +P T W V+GYRFL+RR+E AL+ DV +R+++ +LA+G V+A + GCA +A Sbjct 4 TPTTRW-QVNGYRFLVRRMEHALVRRDVRMLHDPMRSQSRALAVGVVIASLGLAGCAALA 62 Query 63 LLRPQSALGQAPIVMGRESGALYVRVDDVWHPVLNLASARLIAATNANPQPVSESELGHT 122 L RPQ +G A IV+G++SGA++V D PVLNLASARLI NP V ESEL Sbjct 63 LFRPQDKIGDASIVVGKDSGAMFVVTGDTLRPVLNLASARLIVGKPENPVIVKESELDTR 122 Query 123 KRGPLLGIPGAPQLLDQPLAGAESAWAICDS-----DNGGSTTVVVGPAEDSS-AQVLTA 176 RG L+GIPGAP L A++ W +CDS + +T+V+VG E S LT Sbjct 123 PRGALVGIPGAPSALPAGDPAAKTPWTVCDSIAADGNLSVTTSVIVGETEGSDGGATLTG 182 Query 177 EQMILVATESGSPTYLLYGGRRAVVDLADPAVVWALRLQGRVPHVVAQSLLNAVPEAPRI 236 +Q +L +T S YL+YGG+RA VDL DPAV AL L+G P V++ L+NAVPE P + Sbjct 183 DQALLASTSDAS--YLIYGGKRARVDLDDPAVTRALGLEGARPRPVSKGLVNAVPEVPPL 240 Query 237 TAPRIRGGGRA-SVGLPGFLVGGVVRITRASGDEYYVVLEDGVQRIGQVAADLLRFGDSQ 295 AP I G + L +VG V S +YVVL DG+Q+I A+L+ DS Sbjct 241 AAPVIPDAGSSPRYPLQDKVVGSVFTALIGSETAHYVVLRDGIQKISSAVANLIFLSDSH 300 Query 296 GSVNVPTVAPDVIRVAPIVNTLPVSAFPDRPPTPVDGSPGRAVTTLCVTWTP-------- 347 G + +V PD + P V L V +FP+ P VD S C+TW P Sbjct 301 GDTEMSSVPPDATKRIPSVEQLAVDSFPESAPAIVDASDS---PVSCLTWKPLRAPDETG 357 Query 348 AQPGAARVAFLAGSGPPVPLGGVPVTLAQADGRGPALDAVYLPPGRSAYVAARSLSGGGT 407 A AA ++ +AG P+P V LAQ+DG G D VY+ PG S +V + + T Sbjct 358 ASGPAAELSLVAGRALPIPGDARAVELAQSDGAGDNADTVYVQPGTSGFVQSTGIEPTST 417 Query 408 --GTRYLVTDTGVRFAIHDDDVAHD----LGLPTAAIPAPWPVLATLPSGPELSRANASV 461 +++ V DTGVRF I D D D LGL A APW +L L GP L +++A V Sbjct 418 RRDSKFFVADTGVRFGIPDKDADKDSAAALGLDGAQPLAPWQILGLLAQGPSLGKSSALV 477 Query 462 ARDTVAP 468 A D VAP Sbjct 478 AHDGVAP 484 >gi|118471784|ref|YP_885915.1| hypothetical protein MSMEG_1534 [Mycobacterium smegmatis str. MC2 155] gi|118173071|gb|ABK73967.1| probable conserved membrane protein [Mycobacterium smegmatis str. MC2 155] Length=458 Score = 302 bits (773), Expect = 9e-80, Method: Compositional matrix adjust. Identities = 201/467 (44%), Positives = 264/467 (57%), Gaps = 26/467 (5%) Query 7 TWLHVSGYRFLLRRIECALLFGDVCAATGALRARTTSLALGCVLAIVAAMGCAFVALLRP 66 T L SG RFL+RR AL+ GD LRA++ S A GC++ ++AA+ A +AL+RP Sbjct 7 TRLERSGRRFLIRRTMHALVRGDARMIDDPLRAQSVSFAAGCIVTVLAAVVSAVLALVRP 66 Query 67 QSALGQAPIVMGRESGALYVRVDDVWHPVLNLASARLIAATNANPQPVSESELGHTKRGP 126 L API++ R SGAL+VR+ D HPVLNLASARLI A+P V ++ + RGP Sbjct 67 GDTLSDAPILLARNSGALHVRIGDTVHPVLNLASARLIVQNPADPVLVDDAAIDAAPRGP 126 Query 127 LLGIPGAPQLLDQPLAGAESAWAICDSDNGGSTTVVVGPAEDSSAQVLTAEQMILVATES 186 L+GIPGAP + PL+ E WA+C+ STT++ G S L + + VA Sbjct 127 LVGIPGAPARIHPPLSADEITWALCEDLASESTTLIAG---RSGLAPLRPGRAVPVAARG 183 Query 187 GSPTYLLYGGRRAVVDLADPAVVWALRLQGRVPHVVAQSLLNAVPEAPRITAPRIRG-GG 245 TYLL+ GR+A VDL + AVV ALRL+ P V+ +LL++VPEAP + AP I G Sbjct 184 AVTTYLLFDGRKAQVDLREGAVVRALRLEDVTPVPVSPTLLDSVPEAPAVRAPVIPDVGA 243 Query 246 RASVGLPGFLVGGVVRITR------ASGDEYYVVLEDGVQRIGQVAADLLRFGDSQGSVN 299 + G VG VVR++R A G+E++VVL G+QR+ +V ADL+RF Q Sbjct 244 PGPSAVNGLPVGSVVRVSRAVPDDSARGEEFFVVLTGGLQRVDRVVADLIRFTYPQPDGE 303 Query 300 VPTVAPDVIRVAPIVNTLPVSAFPDRPPTPVDGSPGRAVTTLCVTWTPAQPGAARVAFLA 359 P +A DVI P V T+ + A P + LC W P + A L Sbjct 304 PPLLAADVIAGVPHVETVAIPAVPH--------GLSQRTRVLCAAW---DPRGNQTALLF 352 Query 360 GSGPPVPLGGVPVTLAQADGRGPALDAVYLPPGRSAYVAARSLSGGGTGTRYLVTDTGVR 419 G +GG + LAQ+D GP +D + +P GRS V A L+ GG G YL+TD GV Sbjct 353 GEA----VGGATLELAQSDSAGPNIDNIGVPAGRSVLVEATGLA-GGRGPLYLLTDHGVL 407 Query 420 FAIHDDDVAHDLGLPTAAIPAPWPVLATLPSGPELSRANASVARDTV 466 I D D A LGL A+PAPW +LA LP GPELS A ASVARD + Sbjct 408 HGIQDADAARHLGLTGPAVPAPWAMLAMLPRGPELSSAAASVARDAL 454 >gi|229489476|ref|ZP_04383339.1| conserved hypothetical protein [Rhodococcus erythropolis SK121] gi|229323573|gb|EEN89331.1| conserved hypothetical protein [Rhodococcus erythropolis SK121] Length=488 Score = 296 bits (759), Expect = 4e-78, Method: Compositional matrix adjust. Identities = 193/483 (40%), Positives = 276/483 (58%), Gaps = 25/483 (5%) Query 3 SPATTWLHVSGYRFLLRRIECALLFGDVCAATGALRARTTSLALGCVLAIVAAMGCAFVA 62 +P T W V+GYRFL+RR+E AL+ DV +R+++ + +G VLA + GCA +A Sbjct 5 TPTTRW-QVNGYRFLVRRMEHALVRRDVRMLHDPMRSQSRAFTVGIVLAALGLAGCAVLA 63 Query 63 LLRPQSALGQAPIVMGRESGALYVRVDDVWHPVLNLASARLIAATNANPQPVSESELGHT 122 L RPQ +G A IV+ +ESGA++V ++ + PVLNLASARLI + P V SE+ Sbjct 64 LFRPQDRIGDAEIVVAKESGAMFVAMEGTFRPVLNLASARLILGSPGKPAVVKASEVEAK 123 Query 123 KRGPLLGIPGAPQLLDQPLAGAESAWAICDS-----DNGGSTTVVVGPAE-DSSAQVLTA 176 RG L+GIPGAP L + +AW +CDS +T+V+VG + ++ LT Sbjct 124 PRGALVGIPGAPSALPESADPTNAAWTVCDSVGSDGRKSLTTSVLVGSSNVGENSTYLTN 183 Query 177 EQMILVATESGSPTYLLYGGRRAVVDLADPAVVWALRLQGRVPHVVAQSLLNAVPEAPRI 236 ++ LV +SGS +L+Y G+RA +D+ DPA++ AL L+G ++ LN++PE PRI Sbjct 184 DRAFLV--KSGSDHFLVYDGKRAEIDVDDPAIMRALGLEGAQARPISIGFLNSIPEVPRI 241 Query 237 TAPRIRGGGRA-SVGLPGFLVGGVVRITRASGDEYYVVLEDGVQRIGQVAADLLRFGDSQ 295 APRIR G A L VG VV+++ + +YYVVLE+G+Q+IG A L+ F DSQ Sbjct 242 EAPRIRQLGSAPRFPLQNKTVGSVVQVSVGADPQYYVVLENGIQKIGAAVAQLIYFSDSQ 301 Query 296 GSVNVPTVAPDVIRVAPIVNTLPVSAFPDRPPTPVD--GSPGRAVTTLCVTWTP------ 347 G+ + +V PD I P V+ L V P P VD G+P C+ W P Sbjct 302 GATGIASVTPDAISRIPSVSELAVDLLPRVVPEIVDDHGAP-----VGCLEWAPSPAVEG 356 Query 348 AQPGAARVAFLAGSGPPVPLGGVPVTLAQADGRGPALDAVYLPPGRSAYVAARSLSGGGT 407 A+ +A + +AG P+P GG V+LAQADG G LD V++ G +V A + T Sbjct 357 AESSSATLKLVAGLRVPIPEGGKLVSLAQADGSGDNLDNVHVEQGFGGFVQATGIETNST 416 Query 408 GTR--YLVTDTGVRFAIHDDDVAHDLGLPTAAIPAPWPVLATLPSGPELSRANASVARDT 465 + V DTGV++ + D+ A LGL APW +L L SGP L ++NA +A D Sbjct 417 RHDGVFYVADTGVKYGVPDEISARALGLTRTPDRAPWQMLDLLASGPALEKSNALIAHDG 476 Query 466 VAP 468 +AP Sbjct 477 IAP 479 >gi|226305377|ref|YP_002765335.1| hypothetical protein RER_18880 [Rhodococcus erythropolis PR4] gi|226184492|dbj|BAH32596.1| conserved hypothetical protein [Rhodococcus erythropolis PR4] Length=488 Score = 294 bits (753), Expect = 2e-77, Method: Compositional matrix adjust. Identities = 188/481 (40%), Positives = 272/481 (57%), Gaps = 21/481 (4%) Query 3 SPATTWLHVSGYRFLLRRIECALLFGDVCAATGALRARTTSLALGCVLAIVAAMGCAFVA 62 +P T W V+GYRFL+RR+E AL+ DV +R+++ + +G VLA + GCA +A Sbjct 5 TPTTRW-QVNGYRFLVRRMEHALVRRDVRMLHDPMRSQSRAFTVGIVLAALGLAGCAVLA 63 Query 63 LLRPQSALGQAPIVMGRESGALYVRVDDVWHPVLNLASARLIAATNANPQPVSESELGHT 122 L RPQ +G A IV+ +ESGA++V ++ + PVLNLASARLI + P V SE+ Sbjct 64 LFRPQDKIGDAEIVVAKESGAMFVAMEGTFRPVLNLASARLILGSPGKPAIVKASEVEAK 123 Query 123 KRGPLLGIPGAPQLLDQPLAGAESAWAICDS-----DNGGSTTVVVGPAE-DSSAQVLTA 176 RG L+GIPGAP L + + + W +CDS +T+V+VG + + LT Sbjct 124 PRGALVGIPGAPSALPESADPSNALWTVCDSVGSDGRKSLTTSVLVGSSNVGENTTYLTR 183 Query 177 EQMILVATESGSPTYLLYGGRRAVVDLADPAVVWALRLQGRVPHVVAQSLLNAVPEAPRI 236 ++ LV +SGS +L+Y G+RA +D+ +PA++ AL L+G ++ LN++PE PRI Sbjct 184 DRAFLV--KSGSDHFLVYDGKRAEIDVDNPAIMRALGLEGAQARPISAGFLNSIPEVPRI 241 Query 237 TAPRIRGGGRA-SVGLPGFLVGGVVRITRASGDEYYVVLEDGVQRIGQVAADLLRFGDSQ 295 APRIR G A L VG VV+++ + +YYVVLE+G+Q++G A L+ F DSQ Sbjct 242 EAPRIRELGSAPRFPLQNKTVGSVVQVSVGADLQYYVVLENGIQKVGAALAQLIYFSDSQ 301 Query 296 GSVNVPTVAPDVIRVAPIVNTLPVSAFPDRPPTPVDGSPGRAVTTLCVTWTPA------Q 349 G+ + +V PD I P V L V + P P VD C+ W P+ + Sbjct 302 GATGIASVTPDAISRIPSVRELAVDSLPQVVPEIVD---DHDAPVGCLEWAPSRAVDGGE 358 Query 350 PGAARVAFLAGSGPPVPLGGVPVTLAQADGRGPALDAVYLPPGRSAYVAARSLSGGGTGT 409 +A + +AG P+P GG V LAQADG G LD+V++ G +V A + T Sbjct 359 SSSATLKLVAGLQVPIPEGGKLVALAQADGSGDNLDSVHVEQGFGGFVQATGIETNSTRH 418 Query 410 R--YLVTDTGVRFAIHDDDVAHDLGLPTAAIPAPWPVLATLPSGPELSRANASVARDTVA 467 + V DTGV++ + D+ A LGL APW +L L SGP L ++NA +A D VA Sbjct 419 DGVFYVADTGVKYGVPDETSARALGLTRTPDRAPWQILDLLASGPALEKSNALIAHDGVA 478 Query 468 P 468 P Sbjct 479 P 479 >gi|145225538|ref|YP_001136216.1| hypothetical protein Mflv_4962 [Mycobacterium gilvum PYR-GCK] gi|145218024|gb|ABP47428.1| protein of unknown function DUF690 [Mycobacterium gilvum PYR-GCK] Length=453 Score = 294 bits (753), Expect = 2e-77, Method: Compositional matrix adjust. Identities = 213/467 (46%), Positives = 284/467 (61%), Gaps = 34/467 (7%) Query 7 TWLHVSGYRFLLRRIECALLFGDVCAATGALRARTTSLALGCVLAIVAAMGCAFVALLRP 66 T L +SG RFL RR+E AL+ D LRA++ SL +G VLA +A CA +A++RP Sbjct 6 TRLQISGQRFLTRRMEHALVRADARMLDDPLRAQSLSLVVGAVLAAIAVAVCAVIAVVRP 65 Query 67 QSALGQAPIVMGRESGALYVRVDDVWHPVLNLASARLIAATNANPQPVSESELGHTKRGP 126 LG A IV+ RESGA++VR+DDV HPV NLASARL+ + P+ V++ + H +RG Sbjct 66 GGTLGDARIVVVRESGAMFVRLDDVLHPVYNLASARLLLGSPEVPRVVAQRAIDHAERGA 125 Query 127 LLGIPGAPQLLDQPLAGAESAWAICDSDNGGSTTVVVGPAEDSSAQVLTAEQMILVAT-- 184 LGIP AP+ + PL+ E+AW++CD D G TTVV GP + + +TA++ +LV Sbjct 126 RLGIPAAPEQIPTPLSADEAAWSVCDDDR-GVTTVVAGP---PATEGMTADRHVLVTPRG 181 Query 185 ESGSPTYLLYGGRRAVVDLADPAVVWALRLQGRVPHVVAQSLLNAVPEAPRITAPRIRGG 244 +S + TYLL+GGRR+ VDL PAVV ALRL G VP V+ LL A+PEAP I PRI G Sbjct 182 QSAAVTYLLHGGRRSRVDLRHPAVVRALRLDGVVPQPVSMELLAALPEAPAIEPPRIPGL 241 Query 245 GRASVG-LPGFLVGGVVRIT-------RASGDEYYVVLEDGVQRIGQVAADLLRFGDSQG 296 G + G L VG VV + R +GD ++VVL DG+QRIG+V ADL+RF D++ Sbjct 242 GAPAPGALRNRTVGTVVTVAHAGTGSPRGAGD-HFVVLADGLQRIGEVTADLIRFTDARA 300 Query 297 SVNVPTVAPDVIRVAPIVNTLPVSAFPDRPPTPVDGSPGRAVTTLCVTWTPAQPG-AARV 355 +P V+ D++ P+V +LPV+ +PDR + +C TW P G +R Sbjct 301 GAEIPAVSADIVGALPVVTSLPVATYPDRADV-------TTASVVCATWAPTAGGHGSRT 353 Query 356 AFLAGSGPPVPLGGVPVTLAQADGRGPALDAVYLPPGRSAYVAARSLSGGGT--GTRYLV 413 L +GP +P P+ +A GR V +PPGRS YV A L+GG G +LV Sbjct 354 ELL--TGPKLPPAPRPIVVAP--GR-----EVAVPPGRSLYVRAVGLTGGDHSGGLLFLV 404 Query 414 TDTGVRFAIHDDDVAHDLGLPTAAIPAPWPVLATLPSGPELSRANAS 460 TD + F I D D A LGL A +PAPWPVLAT+P GPELSR A+ Sbjct 405 TDAAIMFGIRDADAAAALGLVGAGVPAPWPVLATVPRGPELSRDAAT 451 >gi|54022814|ref|YP_117056.1| hypothetical protein nfa8470 [Nocardia farcinica IFM 10152] gi|54014322|dbj|BAD55692.1| hypothetical protein [Nocardia farcinica IFM 10152] Length=495 Score = 281 bits (719), Expect = 2e-73, Method: Compositional matrix adjust. Identities = 190/492 (39%), Positives = 266/492 (55%), Gaps = 30/492 (6%) Query 1 VPSPATTWLHVSGYRFLLRRIECALLFGDVCAATGALRARTTSLALGCVLAIVAAMGCAF 60 +PS TT VSGYRFL+RR+E AL+ DV +R+++ + A+G VL V GC Sbjct 1 MPSKPTTRWQVSGYRFLVRRMEHALVRRDVRMLHDPMRSQSRAYAVGLVLGCVVLAGCGI 60 Query 61 VALLRPQSALGQAPIVMGRESGALYVRVDDVWHPVLNLASARLIAATNANPQPVSESELG 120 +ALLRPQ +G +++G+ESG +YV +D V HP LNLASARL + + V ESELG Sbjct 61 LALLRPQDKIGDNVLLIGKESGGVYVVIDGVVHPALNLASARLASGDSGKAVIVKESELG 120 Query 121 HTKRGPLLGIPGAPQLLDQPLAGAESAWAIC-----DSDNGGSTTVVVGPAE-DSSAQVL 174 RG L+GIPGAP L G W++C D +T+V+ G E A VL Sbjct 121 KKPRGQLIGIPGAPAALRYDKDGKGRPWSVCDVLKVDGSKDLTTSVLAGDLELGEKASVL 180 Query 175 TAEQMILVATESGSPTYLLYGGRRAVVDLADPAVVWALRLQGRVPHVVAQSLLNAVPEAP 234 A+Q +LV + + YL+Y RA VD++D V AL + G P V + LLNA+PE Sbjct 181 GADQALLVKVKEQA--YLVYDNSRARVDMSDRKVTDALGITGMTPRPVGEGLLNAIPEVL 238 Query 235 RITAPRIRG-GGRASVGLPGFLVGGVVRITRASGDEYYVVLEDGVQRIGQVAADLLRFGD 293 I P+I G S + G VG VV++ D+ YVVL+DG+Q + ++ AD++R + Sbjct 239 PIIPPKINDPGASVSYQIGGHRVGDVVQVA-TEPDKDYVVLQDGLQPVTKLTADIIR--N 295 Query 294 SQGSVNVPTVAPDVIRV-APIVNTLPVSAFPDRPPTPVDGSPGRAVTTLCVTWTPAQPGA 352 + S T RV AP+ +LPV +P+R P+ V+ R ++ C++W P A Sbjct 296 TYRSSATSTHIDQTDRVSAPVAASLPVDTYPERQPSIVE-VKDRPIS--CLSWKPIPAAA 352 Query 353 --------ARVAFLAGSGPPVPLGGVPVTLAQADGRGPALDAVYLPPGRSAYVAARSLS- 403 A ++ + G P+P V LAQADG G D+VY+PPG A+V + Sbjct 353 DNSDGGRRAELSVITGVALPIPDNAKLVPLAQADGSGANADSVYVPPGTGAFVQTTGIEP 412 Query 404 -GGGTGTRYLVTDTGVRFAIHDDDVAHDLGLPTAA----IPAPWPVLATLPSGPELSRAN 458 + + V DTGVR+ I + D LGL + + PAPWP++ L GP L R Sbjct 413 DSSRKDSLFYVADTGVRYGIKNADAQKALGLDSESGVKPEPAPWPIVGLLAGGPTLGREE 472 Query 459 ASVARDTVAPGP 470 A VA D VAP P Sbjct 473 AMVAHDGVAPDP 484 >gi|333918177|ref|YP_004491758.1| hypothetical protein AS9A_0501 [Amycolicicoccus subflavus DQS3-9A1] gi|333480398|gb|AEF38958.1| hypothetical protein AS9A_0501 [Amycolicicoccus subflavus DQS3-9A1] Length=457 Score = 275 bits (704), Expect = 1e-71, Method: Compositional matrix adjust. Identities = 187/459 (41%), Positives = 252/459 (55%), Gaps = 23/459 (5%) Query 21 IECALLFGDVCAATGALRARTTSLALGCVLAIVAAMGCAFVALLRPQSALGQAPIVMGRE 80 +E AL+ D + LR++ +LA+G V+A++ G +A+L PQ + A I +GR+ Sbjct 1 MEHALIRKDARMLSDPLRSQNRALAVGLVIAMLGIAGAGVLAVLWPQDKVRDASIAVGRD 60 Query 81 SGALYVRVDDVWHPVLNLASARLIAATNANPQPVSESELGHTKRGPLLGIPGAPQLLDQP 140 SGA++VRVDDV+HPVLNLASARLI A P VSE +L RGPLLGIPGAPQ L + Sbjct 61 SGAMFVRVDDVFHPVLNLASARLILDNAAEPAMVSEDDLAKYPRGPLLGIPGAPQTL-RV 119 Query 141 LAGAESAWAICDSDNGGS--------TTVVVGPAEDSSAQVLTAEQMILVATESGSPTYL 192 A AW +CDS GG+ T V+ G + + +LV + +L Sbjct 120 DAATGGAWTVCDSLPGGAGGRPESIRTAVIAGDPVLADVRAFGDRDALLVRRDEQD--FL 177 Query 193 LYGGRRAVVDLADPAVVWALRLQGRVPHVVAQSLLNAVPEAPRITAPRIRGGGRASVGLP 252 +Y G RA VDL+D AVV A L+G P V+ LLNAVPE P + P I G S Sbjct 178 IYDGVRARVDLSDLAVVRAYGLEGVQPRPVSAGLLNAVPEVPPLAPPVIEGNDEPSAHFS 237 Query 253 GFLVGGVVRITRASGDEYYVVLEDGVQRIGQVAADLLRFGDSQGSVNVPTVAPDVIRVAP 312 G VG VVR+ +A ++YV++ DGVQ +G+ ADLLRF DS G+ +P V PD ++ P Sbjct 238 GRKVGSVVRVNQAGRSQHYVIVRDGVQPVGEAIADLLRFADSLGAGEIPVVPPDALKRVP 297 Query 313 IVNTLPVSAFPDRPPTPVDGSPGRAVTTLCVTWTPAQPGAARVAFLAGSGPPVPLGGVPV 372 LP+ A+P PT +D C++WTP G+A + LAG+ PVP V Sbjct 298 PREDLPIDAYPAVAPTVIDA------PVACLSWTPVD-GSAALKVLAGAALPVPDDAQLV 350 Query 373 T-LAQADGRGPALDAVYLPPGRSAYVAARSLSGGG----TGTRYLVTDTGVRFAIHDDDV 427 +++A D VY+ PG +V +G +GT V+DTGVRF I Sbjct 351 QRVSEAHADEMLADEVYVAPGGGRFVHPVGTAGAKLALPSGTPVYVSDTGVRFGIPSAAE 410 Query 428 AHDLGLPTAAIPAPWPVLATLPSGPELSRANASVARDTV 466 A LGL + + PAP P+L L GP L R A VA D+V Sbjct 411 AAALGLESDSAPAPGPILRLLTPGPPLGRDEALVAHDSV 449 >gi|325675480|ref|ZP_08155164.1| MPSS family PPE41 protein secretion system protein [Rhodococcus equi ATCC 33707] gi|325553451|gb|EGD23129.1| MPSS family PPE41 protein secretion system protein [Rhodococcus equi ATCC 33707] Length=470 Score = 273 bits (697), Expect = 6e-71, Method: Compositional matrix adjust. Identities = 193/468 (42%), Positives = 258/468 (56%), Gaps = 31/468 (6%) Query 21 IECALLFGDVCAATGALRARTTSLALGCVLAIVAAMGCAFVALLRPQSALGQAPIVMGRE 80 +E AL+ DV + +R+++ +L +G V+A + GCA +AL RPQ +G A IV+G++ Sbjct 1 MEHALVRKDVRMLSDPMRSQSRALGVGIVVACLVLAGCAALALFRPQDKIGNATIVVGKD 60 Query 81 SGALYVRVDDVWHPVLNLASARLIAATNANPQPVSESELGHTKRGPLLGIPGAPQLLDQP 140 SGA++V V+D HPVLNLASARLI A P VSESE+ RG L+GIPGAP L Sbjct 61 SGAMFVAVNDALHPVLNLASARLIVGEAAKPVTVSESEIESRPRGALVGIPGAPSALP-- 118 Query 141 LAGAESA--WAICDS---DNGGSTTVVVGPAEDS-SAQV--LTAEQMILVATESGSPTYL 192 AG+ W +CD+ D GS T V E S S +V L +++ +LV+ G+ TYL Sbjct 119 -AGSPDGQPWTVCDTVTADGTGSVTTTVVVGEPSWSDRVGPLGSDRALLVS--HGADTYL 175 Query 193 LYGGRRAVVDLADPAVVWALRLQGRVPHVVAQSLLNAVPEAPRITAPRIRGGGRA-SVGL 251 +Y GRRA +DL D AV AL L+ P + + LLNA+PE IT P+I G A + + Sbjct 176 VYDGRRAPIDLRDRAVTRALGLESAQPRPIGRGLLNAIPETLPITPPQIESRGSAPNYQI 235 Query 252 PGFLVGGVVRITRASGDEYYVVLEDGVQRIGQVAADLLRFGDSQGSVNVPTVAPDVIRVA 311 G VG VV++ R YYVVL DGVQ I A L++F DSQG + T++PD + A Sbjct 236 AGRTVGSVVKLMRGDDVRYYVVLRDGVQEISAATALLIQFADSQGQSEMATISPDALARA 295 Query 312 PIVNTLPVSAFPDRPPTPVDGSPGRAVTTLCVTWTPAQPGAAR----------VAFLAGS 361 P+ + L VS FP PP D + A C+TWTP GAA+ + AG Sbjct 296 PLADVLDVSTFPAVPPRLADPA---ADPVGCLTWTPQ--GAAQGDDSGRVEAALTLAAGR 350 Query 362 GPPVPLGGVPVTLAQADGRGPALDAVYLPPGRSAYVAARSLSGGG--TGTRYLVTDTGVR 419 P+P V LAQADG G D YL G +V L G G + V DTGVR Sbjct 351 SLPIPDDARTVRLAQADGSGDHADFAYLRSGAGGFVQTTGLESGSARKGGLFFVADTGVR 410 Query 420 FAIHDDDVAHDLGLPTAAIPAPWPVLATLPSGPELSRANASVARDTVA 467 + + + D A LG PAPW ++ L GP L ++ A VA D V+ Sbjct 411 YGVENADAAKALGFEVPGAPAPWRIVELLAPGPTLGKSAALVAHDGVS 458 >gi|312140882|ref|YP_004008218.1| esx cluster lipoprotein [Rhodococcus equi 103S] gi|311890221|emb|CBH49539.1| putative esx cluster lipoprotein [Rhodococcus equi 103S] Length=454 Score = 267 bits (682), Expect = 3e-69, Method: Compositional matrix adjust. Identities = 188/452 (42%), Positives = 250/452 (56%), Gaps = 31/452 (6%) Query 37 LRARTTSLALGCVLAIVAAMGCAFVALLRPQSALGQAPIVMGRESGALYVRVDDVWHPVL 96 +R+++ +L +G V+A + GCA +AL RPQ +G A IV+G++SGA++V V+D HPVL Sbjct 1 MRSQSRALGVGIVVACLVLAGCAALALFRPQDKIGNATIVVGKDSGAMFVAVNDALHPVL 60 Query 97 NLASARLIAATNANPQPVSESELGHTKRGPLLGIPGAPQLLDQPLAGAESA--WAICDS- 153 NLASARLI A P VSESE+ RG L+GIPGAP L AG+ W +CD+ Sbjct 61 NLASARLIVGEAAKPVTVSESEIESRPRGALVGIPGAPSALP---AGSPDGQPWTVCDTV 117 Query 154 --DNGGSTTVVVGPAEDS-SAQV--LTAEQMILVATESGSPTYLLYGGRRAVVDLADPAV 208 D GS T V E S S +V L +++ +LV+ G+ TYL+Y GRRA +DL D AV Sbjct 118 TADGTGSVTTTVVVGEPSWSDRVGPLGSDRALLVS--HGADTYLVYDGRRAPIDLRDRAV 175 Query 209 VWALRLQGRVPHVVAQSLLNAVPEAPRITAPRIRGGGRA-SVGLPGFLVGGVVRITRASG 267 AL L+ P + + LLNA+PE IT P+I G A + + G VG VV++ R Sbjct 176 TRALGLESAQPRPIGRGLLNAIPETLPITPPQIESRGSAPNYQIAGRTVGSVVKLMRGDD 235 Query 268 DEYYVVLEDGVQRIGQVAADLLRFGDSQGSVNVPTVAPDVIRVAPIVNTLPVSAFPDRPP 327 YYVVL DGVQ I A L++F DSQG + T++PD + AP+ + L VS FP PP Sbjct 236 VRYYVVLRDGVQEISSATALLIQFADSQGQSEMATISPDALARAPLADVLDVSTFPAVPP 295 Query 328 TPVDGSPGRAVTTLCVTWTPAQPGAAR----------VAFLAGSGPPVPLGGVPVTLAQA 377 D + A C+TWTP GAA+ + AG P+P V LAQA Sbjct 296 RLADPA---ADPVGCLTWTPQ--GAAQGDDSGRVEAALTLAAGRSLPLPDDARTVRLAQA 350 Query 378 DGRGPALDAVYLPPGRSAYVAARSLSGGG--TGTRYLVTDTGVRFAIHDDDVAHDLGLPT 435 DG G D Y PG +V L G G + V DTGVR+ + + D A LG Sbjct 351 DGSGDHADFAYQRPGAGGFVQTTGLESGSARKGGLFFVADTGVRYGVENADAAKALGFEV 410 Query 436 AAIPAPWPVLATLPSGPELSRANASVARDTVA 467 PAPW ++ L GP L ++ A VA D V+ Sbjct 411 PGAPAPWRIVELLAPGPALGKSAALVAHDGVS 442 >gi|54022792|ref|YP_117034.1| hypothetical protein nfa8250 [Nocardia farcinica IFM 10152] gi|54014300|dbj|BAD55670.1| hypothetical protein [Nocardia farcinica IFM 10152] Length=495 Score = 258 bits (658), Expect = 2e-66, Method: Compositional matrix adjust. Identities = 195/496 (40%), Positives = 258/496 (53%), Gaps = 35/496 (7%) Query 1 VPSPATTWLHVSGYRFLLRRIECALLFGDVCAATGALRARTTSLALGCVLAIVAAMGCAF 60 +P+ TT V+GYRFLLRR++ AL+ DV +R++ SL +G V+ ++ G A Sbjct 1 MPAQLTTKAQVNGYRFLLRRLDHALVRRDVRMLHDPMRSQARSLMVGAVIGLLVVAGAAI 60 Query 61 VALLRPQSALGQAPIVMGRESGALYVRVDDV-----WHPVLNLASARLIAATNANPQPVS 115 +A LRPQ A+G A IV+G++SGALYV V+ HPVLNLASARLIA ++ +P V Sbjct 61 MAFLRPQGAIGDALIVVGKDSGALYVVVEREDGERRLHPVLNLASARLIAGSSESPHSVK 120 Query 116 ESELGHTKRGPLLGIPGAPQLLDQPLAGAESAWAICD-----------SDNGGSTTVVVG 164 +S+L RGPLLGIPGAP L G S W ICD S G TTVV G Sbjct 121 DSKLAGEPRGPLLGIPGAPSALPGSAQGDRSDWTICDTVALSVTGSAASATGVQTTVVAG 180 Query 165 -PAEDSSAQVLTAEQMILVATESGSPTYLLYGGRRAVVDLADPAVVWALRLQGRVPHVVA 223 P + L A++ +LV TYLLY G+RA +D + + AL L G P V Sbjct 181 EPQLSERIRALGADEAVLV--RRADRTYLLYDGKRAALDPGNSVMARALDLSGHRPRPVG 238 Query 224 QSLLNAVPEAPRITAPRIRGGGRASVG-LPGFLVGGVVRITRASGDEYYVVLEDGVQRIG 282 LL+A P + AP I G+ G L VGGV+ + + E YVVL DGVQR+ Sbjct 239 AGLLDAAAAVPPLAAPEIPDAGKPGPGRLAEVPVGGVISVGGSGSGELYVVLADGVQRVS 298 Query 283 QVAADLLRFGDSQGSVNVPTVAPDVIRVAPIVNTLPVSAFPDRPPTPVDGSPGRAVTTLC 342 A+++R DSQG + T+ PDV+ P++NTLPV FP+ P V C Sbjct 299 AFTAEVIRTADSQGMSQIKTMPPDVLAGIPLLNTLPVDHFPETAPRIVSAEDA---PVSC 355 Query 343 VTWTPAQPGA----------ARVAFLAGSGPPVPLGGVPVTLAQADGRGPALDAVYLPPG 392 +TW P A V LAG+ P+P +PVTLA +DG G +D YL P Sbjct 356 LTWGKTDPTEDATAEGSADRATVRLLAGTRTPMPESALPVTLATSDGIGDRVDTAYLRPS 415 Query 393 RSAYVAARSLSGGG--TGTRYLVTDTGVRFAIHDDDVAHDLGLPTAAIPAPWPVLATLPS 450 +V + G G+ + V D G+R+ I D A LGL APW V+ L Sbjct 416 SGEFVQVTGMEPGSPRRGSLFYVADNGIRYGIPDLATAAVLGLGEEPRLAPWAVIGQLVP 475 Query 451 GPELSRANASVARDTV 466 GP LS +A V D + Sbjct 476 GPTLSATDALVQHDAL 491 >gi|296141047|ref|YP_003648290.1| hypothetical protein Tpau_3367 [Tsukamurella paurometabola DSM 20162] gi|296029181|gb|ADG79951.1| protein of unknown function DUF690 [Tsukamurella paurometabola DSM 20162] Length=472 Score = 257 bits (657), Expect = 3e-66, Method: Compositional matrix adjust. Identities = 185/469 (40%), Positives = 251/469 (54%), Gaps = 20/469 (4%) Query 6 TTWLHVSGYRFLLRRIECALLFGDVCAATGALRARTTSLALGCVLAIVAAMGCAFVALLR 65 TT VSGYRF++RR++ ALL D + + +++ SL +G +LA+V GC +AL+R Sbjct 6 TTRAQVSGYRFVVRRMDHALLRRDPRMISDPMSSQSRSLIVGLILALVVTGGCGLLALIR 65 Query 66 PQSALGQAPIVMGRESGALYVRVDDVWHPVLNLASARLIAATNANPQPVSESELGHTKRG 125 PQ A+G + IV+ +ESGALYVR DDV HPV LASARL+ A+P V + L +RG Sbjct 66 PQGAVGNSKIVLAKESGALYVRSDDVLHPVTGLASARLVVGEAASPAQVKDKRLQSYRRG 125 Query 126 PLLGIPGAP-QLLDQPLAGAESA--WAICDSDNGGSTTVVVGPAEDSSAQVLT------- 175 P +GI GAP Q+L A E A W +CD + V PAE L Sbjct 126 PEVGIIGAPAQILGPSAAWKEGATPWLLCDRT---TPAPVDKPAERDRLDTLVTSVASGD 182 Query 176 AEQMILVATESGSPTYLLYGGRRAVVDLADPAVVWALRLQGRVPHVVAQSLLNAVPEAPR 235 A+ L+ + G +LL+GG RA V + DP + L G V+ +LLNA E Sbjct 183 ADDGALLVSREGK-YHLLFGGVRAAVSVDDPVIRRVAGLDGASARSVSAALLNAFAETDP 241 Query 236 ITAPRIRGGGRASVGLPGFLVGGVVRITRASGDEYYVVLEDGVQRIGQVAADLLRFGDSQ 295 + P+I G G+ S + G VG VV++ A + YVVL DGVQ +G+ AADL+R GD++ Sbjct 242 LAVPQIAGRGQPSAVIAGSAVGDVVKVADADRERLYVVLADGVQPVGRWAADLIRAGDAR 301 Query 296 GSVNVPTVAPDVIRVAPIVNTLPVSAFPDRPPTPVDGSPGRAVTTLCVTWTPAQPGAARV 355 + ++ TV V+ A V ++PV PD+ P + G V CV G V Sbjct 302 AT-SIETVPAAVVAAAKTVRSVPVRDLPDQRPK-IRGLKDAPVA--CVAAGADGKGGGTV 357 Query 356 AFLAGSGPPVPLGGVPVTLAQADGRGPALDAVYLPPGRSAYVAARSLSGGGTGTRYLVTD 415 P P G PVTLA ADG G LD Y+PPG YV A G + V+D Sbjct 358 ELRTFRALPTP--GAPVTLAAADGAGDDLDLAYVPPGTGEYVLAAQPGGDRRDGLFYVSD 415 Query 416 TGVRFAIHDDDVAHDLGLPTAAIPAPWPVLATLPSGPELSRANASVARD 464 +GVR+ I + +VA LGL A P W VL LP GP+L +A++ RD Sbjct 416 SGVRYGIPNAEVAQMLGLMHQARPVAWSVLGALPEGPDLDPKSAAMTRD 464 >gi|262203184|ref|YP_003274392.1| hypothetical protein Gbro_3295 [Gordonia bronchialis DSM 43247] gi|262086531|gb|ACY22499.1| protein of unknown function DUF690 [Gordonia bronchialis DSM 43247] Length=496 Score = 251 bits (640), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 188/495 (38%), Positives = 257/495 (52%), Gaps = 43/495 (8%) Query 6 TTWLHVSGYRFLLRRIECALLFGDVCAATGALRARTTSLALGCVLAIVAAMGCAFVALLR 65 TT V+GYRFLL+R+E AL+ DV +R++ +L +G VL ++ GC L+R Sbjct 6 TTKAQVNGYRFLLKRLEHALVRRDVRMLHDPMRSQLQALIVGTVLGLLVLGGCGIWGLIR 65 Query 66 PQSALGQAPIVMGRESGALYVRVDDVWHPVLNLASARLIAATNANPQPVSESELGHTKRG 125 PQ ++G A IV+ + +G++YV V+D HPVLNLASARLI ++A+P V +++L RG Sbjct 66 PQGSVGDAKIVISKSTGSMYVIVEDTLHPVLNLASARLITGSDASPVSVGDNKLTDYPRG 125 Query 126 PLLGIPGAPQLLDQPLAGAESAWAICDSDNGGSTTV-------VVGPAEDSSAQVLTAEQ 178 PLLGIPGAP L P S W +CD + V V+G + + A Sbjct 126 PLLGIPGAPGALPGPADRQRSVWTVCDRSTPSKSAVGETVELTVIGARPELGDPIAAAAT 185 Query 179 MILVATESGSPTYLLY----GGR----RAVVDLADPAVVWALRLQGRVPHVVAQSLLNAV 230 S TYL+Y GR RA VD V+ AL L+G +P ++ LLNA Sbjct 186 DDAALVISDGTTYLVYQVERDGRWMPVRAEVDTDSVPVMRALGLEGALPRRMSAGLLNAF 245 Query 231 PEAPRITAPRIRGGGRASVG-LPGFLVGGVVR-ITRASGDEYYVVLEDGVQRIGQVAADL 288 P + P+I GGGR + + G VG V++ + Y+V+L DG+Q I + A++ Sbjct 246 PLVEPLAVPQIPGGGRPGMAPVSGVPVGSVIKSVGLDDQATYHVLLSDGIQEITEATAEI 305 Query 289 LRFGDSQGSVNVPTVAPDVIRVAPIVNTLPVSAFPDRPPT--PVDGSPGRAVTTLCVTWT 346 LR D GS V T++P + P L V++FP R PT VD P TLC +W+ Sbjct 306 LRLADRSGSGTVVTMSPGQLTNLPPSQALAVTSFPHRTPTLLGVDADP-----TLCRSWS 360 Query 347 -PAQPGAARVAFLAGSGPPVPLGGVPVTLAQADGRGPALDAVYLPPG----------RSA 395 A A L G P+P G PV L ADG GP +D VYL PG +A Sbjct 361 RDLDDPQATTALLTGRALPLPDGARPVRLTTADGAGPGVDNVYLRPGTGELLQVTGNETA 420 Query 396 YVAARSLSGGGTGTRYLVTDTGVRFAIHDDDVAHDLGLPTAAIPAPWPVLATLPSGPELS 455 V A SL + ++D+GVRF + D A LGL PAPW V++ L GP LS Sbjct 421 SVRAESL--------FYISDSGVRFGVPDAATAAVLGLGDTPHPAPWSVVSLLTPGPTLS 472 Query 456 RANASVARDTVAPGP 470 R A V+ D +AP P Sbjct 473 RPAALVSHDGIAPDP 487 >gi|118473477|ref|YP_885027.1| hypothetical protein MSMEG_0616 [Mycobacterium smegmatis str. MC2 155] gi|118174764|gb|ABK75660.1| conserved hypothetical protein [Mycobacterium smegmatis str. MC2 155] Length=518 Score = 234 bits (597), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 181/481 (38%), Positives = 249/481 (52%), Gaps = 22/481 (4%) Query 7 TWLHVSGYRFLLRRIECALLFGDVCAATGALRARTTSLALGCVLAIVAAMGCAFVALLRP 66 T VSG+RF++RRI + D LR ++ ++ G ++ + +GC +L RP Sbjct 34 TRHQVSGWRFVMRRIASGVALHDTRMLVDPLRTQSRAVLTGALILVTGLVGCFIFSLFRP 93 Query 67 QSALGQAPIVMGRESGALYVRVDDVWHPVLNLASARLIAATNANPQPVSESELGHTKRGP 126 G I+ R + ALYVRV + HPVLNL SARLI+ + NP V SE+ RG Sbjct 94 GGVPGNNAILADRSTSALYVRVGEQLHPVLNLTSARLISGSPDNPTMVKTSEIDKFPRGN 153 Query 127 LLGIPGAPQLLDQPLAGAESAWAICDSDNGGS--TTVVVGP--AEDSSAQVLTAEQMILV 182 LLGIPGAP+ + Q A ++ W +CD+ G + TV+ GP A+ A L + +LV Sbjct 154 LLGIPGAPERMVQN-AATDAEWTVCDAVGGANPGVTVIAGPLGADGERAAPLPPDHAVLV 212 Query 183 AT--ESGSPTYLLYGGRRAVVDLADPAVVWALRLQGR--VPHVVAQSLLNAVPEAPRITA 238 + E +LL+ G+R+ +DLAD AV AL L G+ P +A L NAVP AP +TA Sbjct 213 HSDAEPNPGDWLLWDGKRSPIDLADRAVTDALGLGGQALAPRPIAAGLFNAVPAAPALTA 272 Query 239 PRIRGGGRA---SVGLPGFLVGGVVRITRASGDEYYVVLEDGVQRIGQVAADLLRFGDSQ 295 P I G A + LP + VV + YY VL DG+Q I V A +LR DS Sbjct 273 PVIPDAGAAPQFELSLPVPVGAVVVAYDADNTARYYAVLSDGLQPISPVLAAILRNTDSH 332 Query 296 GSVNVPTVAPDVIRVAPIVNTLPVSAFPDRPPTPVDGSPGRAVTTLCVTWT-PAQPGAAR 354 G P + PD + P+ L SA+PD P T V+ S A C WT P+ + Sbjct 333 GFAQPPRLGPDEVARTPMSRGLDTSAYPDNPVTLVEAS---AHPVTCAHWTKPSDAAESS 389 Query 355 VAFLAGSGPPVPLGGVPVTLAQADGRGPALDAVYLPPGRSAYVAARSLSGGG--TGTRYL 412 ++ L+G+ P+ G V L A G A + V L PG +V G G+ + Sbjct 390 LSVLSGAVLPLAEGLHTVDLVGAGAGG-AANRVALTPGTGYFVQTVGAEPGSPTAGSMFW 448 Query 413 VTDTGVRFAI---HDDDVAHDLGLPTAAIPAPWPVLATLPSGPELSRANASVARDTVAPG 469 V+DTGVR+ I DD V LGL T+ +P PW VL+ +GP LSR +A VA D V+ Sbjct 449 VSDTGVRYGIDTAEDDKVVAALGLSTSPLPVPWSVLSQFAAGPALSRGDALVAHDAVSTN 508 Query 470 P 470 P Sbjct 509 P 509 >gi|343926911|ref|ZP_08766404.1| hypothetical protein GOALK_072_01330 [Gordonia alkanivorans NBRC 16433] gi|343763271|dbj|GAA13330.1| hypothetical protein GOALK_072_01330 [Gordonia alkanivorans NBRC 16433] Length=492 Score = 233 bits (593), Expect = 6e-59, Method: Compositional matrix adjust. Identities = 184/481 (39%), Positives = 245/481 (51%), Gaps = 28/481 (5%) Query 6 TTWLHVSGYRFLLRRIECALLFGDVCAATGALRARTTSLALGCVLAIVAAMGCAFVALLR 65 TT V+GYRFL++R+E AL+ DV +R++ +L +G VL ++ GC L+R Sbjct 6 TTKAQVNGYRFLIKRLEHALVRRDVRMLHDPMRSQLQALVVGTVLGLLVLGGCGVYGLVR 65 Query 66 PQSALGQAPIVMGRESGALYVRVDDVWHPVLNLASARLIAATNANPQPVSESELGHTKRG 125 PQ ++G A I++ + SG+ YV V+D HPVLNLASARLI ++ P V++++L RG Sbjct 66 PQGSVGDATIIVSKNSGSTYVLVEDTLHPVLNLASARLITGSSEKPTSVADTKLEPYARG 125 Query 126 PLLGIPGAPQLLDQPLAGAESAWAICDSDNGGS--------TTVVVGPAEDSSAQVLTAE 177 PLLGIPGAP L + S W +CDS S TV+ S+ V TA Sbjct 126 PLLGIPGAPASLPGSAHKSTSMWTVCDSSAVSSDSSSESIRQTVIADKPVLGSSTVETAR 185 Query 178 QMILVATESGSPTYLLY----GGR----RAVVDLADPAVVWALRLQGRVPHVVAQSLLNA 229 + +G T+L+Y GR RA VD V+ AL L P + LLN+ Sbjct 186 PEDALLVRTGDKTFLIYQLFRDGRWSPVRAEVDTDSAPVMRALGLDDVTPRGMTPGLLNS 245 Query 230 VPEAPRITAPRIRGGGR-ASVGLPGFLVGGVVRITRASGD-EYYVVLEDGVQRIGQVAAD 287 P + P + G G+ +VG VG VV+ + Y+VVL DGVQ I AA+ Sbjct 246 FPLVEPLEVPTVPGAGQPGAVG--STTVGSVVKSVDVDDETTYHVVLRDGVQEISAPAAE 303 Query 288 LLRFGDSQGSVNVPTVAPDVIRVAPIVNTLPVSAFPDRPPTPVDGSPGRAVT-TLCVTWT 346 +LR D G+ V TVAP + +V LP+ FP PT + G A TLC +W+ Sbjct 304 ILRLADRDGAAPVRTVAPGELATLKVVEELPIGDFPQVNPTIL----GLATDPTLCRSWS 359 Query 347 PAQPG-AARVAFLAGSGPPVPLGGVPVTLAQADGRGPALDAVYLPPGRSAY--VAARSLS 403 A A LAG P+ G PV L ADG GP LD VYLPPG Y V Sbjct 360 RGTDEPRAETALLAGRALPLKSGARPVRLTSADGAGPGLDEVYLPPGSGEYLQVTGNEAD 419 Query 404 GGGTGTRYLVTDTGVRFAIHDDDVAHDLGLPTAAIPAPWPVLATLPSGPELSRANASVAR 463 T + + V D+GVRF I D + LGL + APW V++ L GP LS A VA Sbjct 420 SARTESLFYVNDSGVRFGIPDLETGGTLGLGDSPSRAPWSVVSLLAPGPTLSAEAALVAH 479 Query 464 D 464 D Sbjct 480 D 480 >gi|240173108|ref|ZP_04751766.1| hypothetical protein MkanA1_27596 [Mycobacterium kansasii ATCC 12478] Length=526 Score = 226 bits (576), Expect = 7e-57, Method: Compositional matrix adjust. Identities = 173/491 (36%), Positives = 254/491 (52%), Gaps = 46/491 (9%) Query 10 HVSGYRFLLRRIECALLFGDVCAATGALRARTTSLALGCVLAIVAAMGCAFVALLRPQSA 69 V+G+RF++RRI + D LR ++ ++ +G ++ I +GC +L+RP Sbjct 35 QVTGWRFVMRRIASGIALHDTRMLVDPLRTQSRAVLMGALVLITGLVGCFVFSLIRPNGQ 94 Query 70 LGQAPIVMGRESGALYVRVDDVWHPVLNLASARLIAATNANPQPVSESELGHTKRGPLLG 129 G +P++ R + ALYVRV D HPVLNL SARLIA NP V SEL RG L+G Sbjct 95 AGSSPVLADRSTAALYVRVGDAVHPVLNLTSARLIAGKPVNPTTVKSSELDRFPRGNLIG 154 Query 130 IPGAPQLLDQPLAGAESAWAICDSDNGG--------STTVVVGPAEDSSAQ--VLTAEQM 179 IPGAP+ + Q ++ W +CDS G + TV+ G + A+ L + Q Sbjct 155 IPGAPERMVQNTT-RDANWTVCDSVGGQGGRSAHSTAVTVIAGRPDSGGARAAALGSAQA 213 Query 180 ILVATESGSPTYLLYGGRRAVVDLADPAVVWALRL--QGRVPHVVAQSLLNAVPEAPRIT 237 +LV ++G+ ++LL+ G+R+++DL D AV AL L P +A L NA+PEAP +T Sbjct 214 VLV--DNGTGSWLLWDGKRSLLDLNDHAVTSALGLGTDALAPRPIALGLFNAIPEAPPLT 271 Query 238 APRIRGGGRASVGLPGFLV----GGVVRITRASG------DEYYVVLEDGVQRIGQVAAD 287 AP I G G PGF V G VV +G +YY VL DG+Q I V A Sbjct 272 APVIPNAG----GPPGFAVPAPIGAVVEALTLNGTGNAETSQYYAVLPDGLQPISPVLAA 327 Query 288 LLRFGDSQGSVNVPTVAPDVIRVAPIVNTLPVSAFPDRPPTPVDGSPGRAVTTLCVTWT- 346 LLR +S G P + D + P+ L ++ +P + + VD + R+ T C W+ Sbjct 328 LLRNTNSYGLQQPPHLGADEVAKLPVSRMLDITRYPVQSLSLVDVA--RSPVT-CAYWSK 384 Query 347 PAQPGAARVAFLAGSGPPVPLGGVPVTLAQADGRGPALDAVYLPPGRSAYVAARSLSGG- 405 PA + ++ L+G+G +P+ T+ G G V L PG + +S+ GG Sbjct 385 PAGATTSSLSLLSGAG--LPVADAVHTVDLVGGGGTTATQVALAPGTGYFT--QSVGGGA 440 Query 406 ---GTGTRYLVTDTGVRFAIHDD-----DVAHDLGLPTAAIPAPWPVLATLPSGPELSRA 457 TG+ + V+DTGVR+ I + LGL T + PW VL+ +GP LSRA Sbjct 441 TAPATGSLFWVSDTGVRYGIDTEGEGGRKTVEALGLQTPPLTIPWSVLSLFAAGPTLSRA 500 Query 458 NASVARDTVAP 468 +A +A D + P Sbjct 501 DALLAHDALPP 511 >gi|340625321|ref|YP_004743773.1| hypothetical protein MCAN_02921 [Mycobacterium canettii CIPT 140010059] gi|340003511|emb|CCC42632.1| putative conserved membrane protein [Mycobacterium canettii CIPT 140010059] Length=538 Score = 224 bits (572), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 177/496 (36%), Positives = 251/496 (51%), Gaps = 44/496 (8%) Query 7 TWLHVSGYRFLLRRIECALLFGDVCAATGALRARTTSLALGCVLAIVAAMGCAFVALLRP 66 T V+G+RF++RRI + D LR ++ ++ +G ++ I +G +L+RP Sbjct 38 TRHQVTGWRFVMRRIAAGIALHDTRMLVDPLRTQSRAVLMGVLIVITGLIGSFVFSLIRP 97 Query 67 QSALGQAPIVMGRESGALYVRVDDVWHPVLNLASARLIAATNANPQPVSESELGHTKRGP 126 G ++ R + ALYVRV + HPVLNL SARLI +P V +EL RG Sbjct 98 NGQAGSNAVLADRSTAALYVRVGEQLHPVLNLTSARLIVGRPVSPTTVKSTELDQFPRGN 157 Query 127 LLGIPGAPQLLDQPLAGAESAWAICDSDN--------GGSTTVVVGPAEDSSAQ--VLTA 176 L+GIPGAP+ + Q + ++ W +CD N G TV+ GP ED+ A+ L Sbjct 158 LIGIPGAPERMVQNTS-TDANWTVCDGLNAPSRGGADGVGVTVIAGPLEDTGARAAALGP 216 Query 177 EQMILVATESGSPTYLLYGGRRAVVDLADPAVVWALRLQGRV--PHVVAQSLLNAVPEAP 234 Q +LV +SG+ T+LL+ G+R+ +DLAD AV L L V P V+A L NA+PEAP Sbjct 217 GQAVLV--DSGAGTWLLWDGKRSPIDLADHAVTSGLGLGADVPAPRVIASGLFNAIPEAP 274 Query 235 RITAPRIRGGGR-ASVGLPGFLVGGVVR--ITRASGD------EYYVVLEDGVQRIGQVA 285 +TAP I G AS G+P +G VV + SG +YY VL DG+Q+I V Sbjct 275 PLTAPIIPDAGNPASFGVPA-PIGAVVSSYALKDSGKTISDTVQYYAVLPDGLQQISPVL 333 Query 286 ADLLRFGDSQGSVNVPTVAPDVIRVAPIVNTLPVSAFPDRPPTPVDGSPGRAVTTLCVTW 345 A +LR +S G P + D + P+ L +P P + VD + R T C W Sbjct 334 AAILRNNNSYGLQQPPRLGADEVAKLPVSRVLDTRRYPSEPVSLVDVT--RDPVT-CAYW 390 Query 346 T-PAQPGAARVAFLAGSGPPVPLGGVPVTLAQADGRGPALDAVYLPPGRSAYVAARSLSG 404 + P + + LAGS PVP V L A G G V L G + +++ G Sbjct 391 SKPVGAATSSLTLLAGSALPVPDAVHTVELVGA-GNGGVATRVALAAGTGYFT--QTVGG 447 Query 405 G----GTGTRYLVTDTGVRFAIHDD--------DVAHDLGLPTAAIPAPWPVLATLPSGP 452 G G+ + V+DTGVR+ I ++ LGL +P PW VL+ GP Sbjct 448 GPDAPAAGSLFWVSDTGVRYGIDNEPQGVAGGGKAVEALGLNPPPVPIPWSVLSLFVPGP 507 Query 453 ELSRANASVARDTVAP 468 LSRA+A +A DT+ P Sbjct 508 TLSRADALLAHDTLVP 523 >gi|296394877|ref|YP_003659761.1| hypothetical protein Srot_2493 [Segniliparus rotundus DSM 44985] gi|296182024|gb|ADG98930.1| protein of unknown function DUF690 [Segniliparus rotundus DSM 44985] Length=557 Score = 224 bits (571), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 172/530 (33%), Positives = 249/530 (47%), Gaps = 75/530 (14%) Query 6 TTWLHVSGYRFLLRRIECALLFGDVCAATGALRARTTSLALGCVLAIVAAMGCAFVALLR 65 TT V+GYRFLL R++ A++ D+ +R++ SL +G V I+ GC A Sbjct 20 TTRSQVNGYRFLLSRMDHAIVRRDIRMLHDPMRSQYRSLLVGLVFGILVLAGCGIWAYFS 79 Query 66 PQSALGQAP--IVMGRESGALYVRVDDVWHPVLNLASARLIAATNANPQPVSESELGHTK 123 P + Q + G +SGA YV V+ HPVLN SA LI P V E+ELG Sbjct 80 PNRLIKQEQDTFIFGHDSGARYVMVNGKLHPVLNAVSAWLIIGKKTPPVSVKETELGKFS 139 Query 124 RGPLLGIPGAPQLLDQPLAGAESAWAICDSDNGG------------------------ST 159 RGPL+GI GAP + P +S W++CD+ G Sbjct 140 RGPLVGIVGAPDSV-MPSPPTKSEWSVCDTTMVGIGSRAQQENPPRSTKIPEYPEGSIEL 198 Query 160 TVVVGPAEDSSAQVLTAEQMILVATESGSPTYLLYG-GRRAVVDL-----ADPAVVWALR 213 ++V G A S VL A+ LVA + + YL+YG G+RA +DL A+ AV+ A + Sbjct 199 SIVEGAARGS---VLPADSAFLVAYNNKN--YLVYGDGKRAEIDLDPQVAANNAVMSAYQ 253 Query 214 L----------QGRVPHVVAQSLLNAVPEAPRITAPRIRGGGR---ASVGLPGFLVGGVV 260 L Q R P ++ L N++ E P I P I G A++G+ LVG VV Sbjct 254 LTEYRKQDVTKQKRFPRQISDGLFNSLEELPPIVPPAIPHRGDPPPAALGVSNILVGTVV 313 Query 261 RITRASGDE-YYVVLEDGVQRIGQVAADLLRFGDSQGSVNVPTVAPDVIRVAPIVNTLPV 319 + +G+E +YV+ G Q I + ADL+R Q ++ + P + + L + Sbjct 314 KSRGTNGEEQFYVIESTGYQSITKAMADLIRNSSDQIGTDIKVLQPSELNRLQTAHELDI 373 Query 320 SAFPDRPPTPVDGSPGRAVTTLCVTWTPAQPGA-ARVAFLAGSGPPVPLGGVPVTLAQAD 378 +P PP +D ++ +C W+ ++ A ++ G+ PVP G PV LA AD Sbjct 374 DWYPPVPPKILD---PKSSQVICYNWSKSKGDAQSKARLFLGTKVPVPANGDPVELASAD 430 Query 379 G----------RGPALDAVYLPPGRSAYVAARSL--SGGGTGTRYLVTDTGVRFAIHDDD 426 G +D VYL PG + + + G+ + V DTGVRF I + Sbjct 431 GGETVDSQGVHHNNGIDKVYLQPGTGFFAQGVGVAPNNEKHGSIFYVADTGVRFGIQNLS 490 Query 427 VAHDLGLPTAA-------IPAPWPVLATLPSGPELSRANASVARDTVAPG 469 A LGLP ++ +P PW +L LP GP LSR +A V D+ APG Sbjct 491 DASALGLPASSAGDGSVGLPVPWSILGKLPQGPTLSRGDALVELDSAAPG 540 >gi|336460188|gb|EGO39092.1| type VII secretion protein EccB, Actinobacterial [Mycobacterium avium subsp. paratuberculosis S397] Length=539 Score = 223 bits (569), Expect = 4e-56, Method: Compositional matrix adjust. Identities = 176/497 (36%), Positives = 252/497 (51%), Gaps = 45/497 (9%) Query 7 TWLHVSGYRFLLRRIECALLFGDVCAATGALRARTTSLALGCVLAIVAAMGCAFVALLRP 66 T VSG+RF++RRI + D LR ++ ++A+G VL + GC +L+RP Sbjct 34 TRHQVSGWRFVMRRIASGIALHDTRMLVDPLRTQSRAVAMGAVLLVTGLAGCFVFSLIRP 93 Query 67 QSALGQAPIVMGRESGALYVRVDDVWHPVLNLASARLIAATNANPQPVSESELGHTKRGP 126 G ++ R + ALYVRV + HPVLNL SARLI +P V SEL RG Sbjct 94 NGTAGTNAVLADRSTAALYVRVGEELHPVLNLTSARLITGRPVDPTMVKSSELDRFPRGN 153 Query 127 LLGIPGAPQLLDQPLAGAESAWAICD--SDNGGS------TTVVVGPAEDSSAQVLTA-E 177 L+GIPGAP+ + Q ++ W +CD S+ GG TV+ G + S A+ T Sbjct 154 LIGIPGAPERMVQN-PSTDANWTVCDAVSEPGGHAAHSAGVTVIAGRPDSSGARAATLPS 212 Query 178 QMILVATESGSPTYLLYGGRRAVVDLADPAVVWALRL-QGR----VPHVVAQSLLNAVPE 232 + L+A G+ T+LL+ G+R+ ++L D A+ AL L QG P +A L NA+PE Sbjct 213 RQALLADRDGT-TWLLWDGKRSQINLTDHAITNALGLGQGNSEIPAPRPIALGLFNAIPE 271 Query 233 APRITAPRIRGGGRASVGLPGFLVGGVV-----RITRASGDEYYVVLEDGVQRIGQVAAD 287 AP +TAP I G + +GGVV + + YY VL DG+Q+I V A Sbjct 272 APPLTAPGIPNAGAPAPFTAPAPIGGVVVSYTLDQSSSGAPRYYAVLPDGLQQISPVLAA 331 Query 288 LLRFGDSQGSVNVPTVAPDVIRVAPIVNTLPVSAFPDRPPTPVDGSPGRAVTTLCVTWT- 346 +LR +S G P + D + P+ L + +PD+ VD + +C W+ Sbjct 332 ILRNTNSYGLDQPPRLGADAVAKLPVSRMLDTARYPDQQVGVVDAAKS---PVMCAYWSK 388 Query 347 PAQPGAARVAFLAGSGPPVPLGGVPVTLAQADGRGPALDA-VYLPPGRSAYVAARSLSGG 405 PA+ ++ V L GS PV V L G PA A V L PG + +++ GG Sbjct 389 PAKAASSSVNLLTGSALPVAESIRTVDL--VGGGSPATAARVALAPGTGYFT--QTVGGG 444 Query 406 ----GTGTRYLVTDTGVRFAIHDDDVAHD----------LGLPTAAIPAPWPVLATLPSG 451 G G+ + V+DTGVR+ I D++ H LGL + +P PW VL+ SG Sbjct 445 PNSPGAGSLFWVSDTGVRYGI-DNEAEHSAAGQNKTVEALGLTGSPVPIPWSVLSLFASG 503 Query 452 PELSRANASVARDTVAP 468 P LSRA+A +A D +AP Sbjct 504 PTLSRADALLAHDGLAP 520 >gi|41409877|ref|NP_962713.1| hypothetical protein MAP3779 [Mycobacterium avium subsp. paratuberculosis K-10] gi|41398709|gb|AAS06329.1| hypothetical protein MAP_3779 [Mycobacterium avium subsp. paratuberculosis K-10] Length=539 Score = 223 bits (567), Expect = 7e-56, Method: Compositional matrix adjust. Identities = 176/497 (36%), Positives = 252/497 (51%), Gaps = 45/497 (9%) Query 7 TWLHVSGYRFLLRRIECALLFGDVCAATGALRARTTSLALGCVLAIVAAMGCAFVALLRP 66 T VSG+RF++RRI + D LR ++ ++A+G VL + GC +L+RP Sbjct 34 TRHQVSGWRFVMRRIASGIALHDTRMLVDPLRTQSRAVAMGAVLLVTGLAGCFVFSLIRP 93 Query 67 QSALGQAPIVMGRESGALYVRVDDVWHPVLNLASARLIAATNANPQPVSESELGHTKRGP 126 G ++ R + ALYVRV + HPVLNL SARLI +P V SEL RG Sbjct 94 NGTAGTNAVLADRSTAALYVRVGEDLHPVLNLTSARLITGRPVDPTMVKSSELDRFPRGN 153 Query 127 LLGIPGAPQLLDQPLAGAESAWAICD--SDNGGS------TTVVVGPAEDSSAQVLTA-E 177 L+GIPGAP+ + Q ++ W +CD S+ GG TV+ G + S A+ T Sbjct 154 LIGIPGAPERMVQN-PSTDANWTVCDAVSEPGGHAAHSAGVTVIAGRPDSSGARAATLPS 212 Query 178 QMILVATESGSPTYLLYGGRRAVVDLADPAVVWALRL-QGR----VPHVVAQSLLNAVPE 232 + L+A G+ T+LL+ G+R+ ++L D A+ AL L QG P +A L NA+PE Sbjct 213 RQALLADRDGT-TWLLWDGKRSQINLTDHAITNALGLGQGNSEIPAPRPIALGLFNAIPE 271 Query 233 APRITAPRIRGGGRASVGLPGFLVGGVV-----RITRASGDEYYVVLEDGVQRIGQVAAD 287 AP +TAP I G + +GGVV + + YY VL DG+Q+I V A Sbjct 272 APPLTAPGIPNAGAPAPFTAPAPIGGVVVSYTLDQSSSGAPRYYAVLPDGLQQISPVLAA 331 Query 288 LLRFGDSQGSVNVPTVAPDVIRVAPIVNTLPVSAFPDRPPTPVDGSPGRAVTTLCVTWT- 346 +LR +S G P + D + P+ L + +PD+ VD + +C W+ Sbjct 332 ILRNTNSYGLDQPPRLGADAVAKLPVSRMLDTARYPDQQVGVVDAAKS---PVMCAYWSK 388 Query 347 PAQPGAARVAFLAGSGPPVPLGGVPVTLAQADGRGPALDA-VYLPPGRSAYVAARSLSGG 405 PA+ ++ V L GS PV V L G PA A V L PG + +++ GG Sbjct 389 PAKAASSSVNLLTGSALPVAESIRTVDL--VGGGSPATAARVALAPGTGYFT--QTVGGG 444 Query 406 ----GTGTRYLVTDTGVRFAIHDDDVAHD----------LGLPTAAIPAPWPVLATLPSG 451 G G+ + V+DTGVR+ I D++ H LGL + +P PW VL+ SG Sbjct 445 PNSPGAGSLFWVSDTGVRYGI-DNEAEHSAAGQNKTVEALGLTGSPVPIPWSVLSLFASG 503 Query 452 PELSRANASVARDTVAP 468 P LSRA+A +A D +AP Sbjct 504 PTLSRADALLAHDGLAP 520 >gi|254777311|ref|ZP_05218827.1| hypothetical protein MaviaA2_21941 [Mycobacterium avium subsp. avium ATCC 25291] Length=544 Score = 221 bits (564), Expect = 2e-55, Method: Compositional matrix adjust. Identities = 173/499 (35%), Positives = 242/499 (49%), Gaps = 44/499 (8%) Query 7 TWLHVSGYRFLLRRIECALLFGDVCAATGALRARTTSLALGCVLAIVAAMGCAFVALLRP 66 T VSG+RF++RRI + D LR ++ ++A+G VL + GC +L+RP Sbjct 34 TRHQVSGWRFVMRRIASGIALHDTRMLVDPLRTQSRAVAMGAVLLVTGLAGCFVFSLIRP 93 Query 67 QSALGQAPIVMGRESGALYVRVDDVWHPVLNLASARLIAATNANPQPVSESELGHTKRGP 126 G ++ R + ALYVRV D HPVLNL SARLI NP V +EL RG Sbjct 94 NGTAGTNAVLADRSTAALYVRVGDDLHPVLNLTSARLIVGKAVNPTTVKSAELDRFPRGN 153 Query 127 LLGIPGAPQLLDQPLAGAESAWAICDSDN----GGS------TTVVVGPAEDSSAQ--VL 174 LLGIPGAP+ + Q ++ W +CDS + GG TV+ G + S A+ L Sbjct 154 LLGIPGAPERMVQN-PSTDANWTVCDSVSEPAPGGHGAHSTGVTVIAGRPDSSGARAAAL 212 Query 175 TAEQMILVATESGSPTYLLYGGRRAVVDLADPAVVWALRLQGR-----VPHVVAQSLLNA 229 ++Q IL + G T+LL+ GRR+ ++LAD AV AL L P +A L NA Sbjct 213 PSQQAILAERDGG--TWLLWNGRRSQINLADHAVTNALGLTENNSELPAPRPIALGLFNA 270 Query 230 VPEAPRITAPRIRGGGRASVGLPGFLVGGVV-----RITRASGDEYYVVLEDGVQRIGQV 284 +PEAP ++AP I G + +G VV + + YY VL DG+Q+I V Sbjct 271 IPEAPSLSAPGIPNAGAPAPFAVPAPIGAVVVSYTLDQSSSGAPRYYAVLPDGLQQISPV 330 Query 285 AADLLRFGDSQGSVNVPTVAPDVIRVAPIVNTLPVSAFPDRPPTPVDGSPGRAVTTLCVT 344 A +LR +S G P + D + P+ L + +PD+ + VD + C Sbjct 331 LAAILRNTNSYGLDQPPRLGADAVAKLPVSRMLDTARYPDQHVSLVDTAKS---PVTCAY 387 Query 345 WT-PAQPGAARVAFLAGSGPPVPLGGVPVTLAQADG--RGPALDAVYLPPGRSAYVAARS 401 WT PA + + L+GS P+ PV L GP V LPPG + Sbjct 388 WTKPAGAATSSLNLLSGSALPIAESIRPVDLVGGGSPQNGPVATRVALPPGTGYFTQTAG 447 Query 402 LSGGGTGTR--YLVTDTGVRFAIHDDDVAHD----------LGLPTAAIPAPWPVLATLP 449 G G + V+DTGVR+ I D++ H LGL + +P PW VL+ Sbjct 448 GGAGSPGAGSLFWVSDTGVRYGI-DNEAEHSAAGHGKTVEALGLSGSPLPIPWSVLSLFA 506 Query 450 SGPELSRANASVARDTVAP 468 GP LSRA+A +A D + P Sbjct 507 KGPTLSRADALLAHDGLPP 525 >gi|254818904|ref|ZP_05223905.1| hypothetical protein MintA_03211 [Mycobacterium intracellulare ATCC 13950] Length=539 Score = 221 bits (562), Expect = 3e-55, Method: Compositional matrix adjust. Identities = 174/496 (36%), Positives = 248/496 (50%), Gaps = 43/496 (8%) Query 7 TWLHVSGYRFLLRRIECALLFGDVCAATGALRARTTSLALGCVLAIVAAMGCAFVALLRP 66 T VSG+RF++RRI + D LR ++ ++A+G VL + GC +L+RP Sbjct 34 TRHQVSGWRFVMRRIASGIALHDTRMLVDPLRTQSRAVAMGAVLLVTGLAGCFVFSLIRP 93 Query 67 QSALGQAPIVMGRESGALYVRVDDVWHPVLNLASARLIAATNANPQPVSESELGHTKRGP 126 G ++ R + ALYVRV + HPVLNL SARLI +P V SEL RG Sbjct 94 NGTAGTNAVLADRSTAALYVRVGEDLHPVLNLTSARLITGRPVDPTMVKSSELDRFPRGN 153 Query 127 LLGIPGAPQLLDQPLAGAESAWAICD--SDNGGS------TTVVVGPAEDSSAQVLTAEQ 178 L+GIPGAP+ + Q ++ W +CD S+ GG TV+ G + S A+ T Sbjct 154 LIGIPGAPERMVQN-PSTDANWTVCDAVSEPGGHAAHSTGVTVIAGRPDSSGARAATLPP 212 Query 179 MILVATESGSPTYLLYGGRRAVVDLADPAVVWALRL-QGR----VPHVVAQSLLNAVPEA 233 + + T+LL+ G+R+ ++L D A+ AL L QG P +A L NA+PEA Sbjct 213 RQAMLADRDGTTWLLWDGKRSQINLTDHAITNALGLGQGNSEIPAPRPIALGLFNAIPEA 272 Query 234 PRITAPRI-RGGGRASVGLPGFLVGGVVRIT----RASGDEYYVVLEDGVQRIGQVAADL 288 P +TAP I G A +P + G VV T + YY VL DG+Q+I V A + Sbjct 273 PPLTAPGIPNAGAPAPFTVPAPIGGVVVSYTLDQSSSGAPRYYAVLPDGLQQISPVLAAI 332 Query 289 LRFGDSQGSVNVPTVAPDVIRVAPIVNTLPVSAFPDRPPTPVDGSPGRAVTTLCVTWT-P 347 LR +S G P + D + P+ L + +PD+ VD + +C W+ P Sbjct 333 LRNTNSYGLDQPPRLGADAVAKLPVSRMLDTARYPDQQVGVVDAAKS---PVMCAYWSKP 389 Query 348 AQPGAARVAFLAGSGPPVPLGGVPVTLAQADGRGPALDA-VYLPPGRSAYVAARSLSGG- 405 A+ ++ V L GS PV V L G PA A V L PG + +++ GG Sbjct 390 AKAASSSVNLLTGSALPVAESIRTVDL--VGGGSPATAARVALAPGTGYFT--QTVGGGP 445 Query 406 ---GTGTRYLVTDTGVRFAIHDDDVAHD----------LGLPTAAIPAPWPVLATLPSGP 452 G G+ + V+DTGVR+ I D++ H LGL + +P PW VL+ SGP Sbjct 446 NSPGAGSLFWVSDTGVRYGI-DNEAEHSAAGQNKTVEALGLTGSPVPIPWSVLSLFASGP 504 Query 453 ELSRANASVARDTVAP 468 LSRA+A +A D + P Sbjct 505 TLSRADALLAHDGLTP 520 >gi|118463197|ref|YP_883992.1| hypothetical protein MAV_4870 [Mycobacterium avium 104] gi|118164484|gb|ABK65381.1| conserved hypothetical protein [Mycobacterium avium 104] Length=544 Score = 220 bits (560), Expect = 5e-55, Method: Compositional matrix adjust. Identities = 173/499 (35%), Positives = 243/499 (49%), Gaps = 44/499 (8%) Query 7 TWLHVSGYRFLLRRIECALLFGDVCAATGALRARTTSLALGCVLAIVAAMGCAFVALLRP 66 T VSG+RF++RRI + D LR ++ ++A+G VL + GC +L+RP Sbjct 34 TRHQVSGWRFVMRRIASGIALHDTRMLVDPLRTQSRAVAMGAVLLVTGLAGCFVFSLIRP 93 Query 67 QSALGQAPIVMGRESGALYVRVDDVWHPVLNLASARLIAATNANPQPVSESELGHTKRGP 126 G ++ R + ALYVRV D HPVLNL SARLI NP V +EL RG Sbjct 94 NGTAGTNAVLADRSTAALYVRVGDDLHPVLNLTSARLIVGKPVNPTTVKSAELDRFPRGN 153 Query 127 LLGIPGAPQLLDQPLAGAESAWAICDSDN----GGS------TTVVVGPAEDSSAQ--VL 174 LLGIPGAP+ + Q ++ W +CDS + GG TV+ G + S A+ L Sbjct 154 LLGIPGAPERMVQN-PSTDANWTVCDSVSEPAPGGHGAHSTGVTVIAGRPDSSGARAAAL 212 Query 175 TAEQMILVATESGSPTYLLYGGRRAVVDLADPAVVWALRLQGR-----VPHVVAQSLLNA 229 ++Q IL + G T+LL+ GRR+ ++LAD AV AL L P +A L NA Sbjct 213 PSQQAILAERDGG--TWLLWNGRRSQINLADHAVTNALGLTENNSELPAPRPIALGLFNA 270 Query 230 VPEAPRITAPRIRGGGRASVGLPGFLVGGVV-----RITRASGDEYYVVLEDGVQRIGQV 284 +PEAP ++AP I G + +G VV + + YY VL DG+Q+I V Sbjct 271 IPEAPSLSAPGIPNAGAPAPFAVPAPIGAVVVSYTLDQSSSGAPRYYAVLPDGLQQISPV 330 Query 285 AADLLRFGDSQGSVNVPTVAPDVIRVAPIVNTLPVSAFPDRPPTPVDGSPGRAVTTLCVT 344 A +LR +S G P + D + P+ L + +PD+ + VD + C Sbjct 331 LAAILRNTNSYGLDQPPRLGADAVAKLPVSRMLDTARYPDQHVSLVDTAKS---PVTCAY 387 Query 345 WT-PAQPGAARVAFLAGSGPPVPLGGVPVTLAQADG--RGPALDAVYLPPGRSAYVAARS 401 W+ PA + + L+GS P+ PV L GP V LPPG + S Sbjct 388 WSKPAGAATSSLNLLSGSALPIAESIRPVDLVGGGSPQNGPVATRVALPPGTGYFTQTAS 447 Query 402 LSGGGTGTR--YLVTDTGVRFAIHDDDVAHD----------LGLPTAAIPAPWPVLATLP 449 G G + V+DTGVR+ I D++ H LGL + +P PW VL+ Sbjct 448 GGAGSPGAGSLFWVSDTGVRYGI-DNEAEHSAAGHGKTVEALGLSGSPLPIPWSVLSLFA 506 Query 450 SGPELSRANASVARDTVAP 468 GP LSRA+A +A D + P Sbjct 507 KGPTLSRADALLAHDGLPP 525 >gi|289572868|ref|ZP_06453095.1| conserved membrane protein [Mycobacterium tuberculosis K85] gi|339630358|ref|YP_004722000.1| hypothetical protein MAF_02850 [Mycobacterium africanum GM041182] gi|289537299|gb|EFD41877.1| conserved membrane protein [Mycobacterium tuberculosis K85] gi|339329714|emb|CCC25357.1| putative conserved membrane protein [Mycobacterium africanum GM041182] Length=538 Score = 219 bits (559), Expect = 6e-55, Method: Compositional matrix adjust. Identities = 174/494 (36%), Positives = 246/494 (50%), Gaps = 40/494 (8%) Query 7 TWLHVSGYRFLLRRIECALLFGDVCAATGALRARTTSLALGCVLAIVAAMGCAFVALLRP 66 T V+G+RF++RRI + D LR ++ ++ +G ++ I +G +L+RP Sbjct 38 TRHQVTGWRFVMRRIAAGIALHDTRMLVDPLRTQSRAVLMGVLIVITGLIGSFVFSLIRP 97 Query 67 QSALGQAPIVMGRESGALYVRVDDVWHPVLNLASARLIAATNANPQPVSESELGHTKRGP 126 G ++ R + ALYVRV + HPVLNL SARLI +P V +EL RG Sbjct 98 NGQAGSNAVLADRSTAALYVRVGEQLHPVLNLTSARLIVGRPVSPTTVKSTELDQFPRGN 157 Query 127 LLGIPGAPQLLDQPLAGAESAWAICDSDN--------GGSTTVVVGPAEDSSAQ--VLTA 176 L+GIPGAP+ + Q + ++ W +CD N G TV+ GP ED+ A+ L Sbjct 158 LIGIPGAPERMVQNTS-TDANWTVCDGLNAPSRGGADGVGVTVIAGPLEDTGARAAALGP 216 Query 177 EQMILVATESGSPTYLLYGGRRAVVDLADPAVVWALRLQGRV--PHVVAQSLLNAVPEAP 234 Q +LV +SG+ T+LL+ G+R+ +DLAD AV L L V P ++A L NA+PEAP Sbjct 217 GQAVLV--DSGAGTWLLWDGKRSPIDLADHAVTSGLGLGADVPAPRIIASGLFNAIPEAP 274 Query 235 RITAPRIRGGGR-ASVGLPGFLVGGVVR--------ITRASGDEYYVVLEDGVQRIGQVA 285 +TAP I G AS G+P +G VV T + +YY VL DG+Q+I V Sbjct 275 PLTAPIIPDAGNPASFGVPA-PIGAVVSSYALKDSGKTMSDTVQYYAVLPDGLQQISPVL 333 Query 286 ADLLRFGDSQGSVNVPTVAPDVIRVAPIVNTLPVSAFPDRPPTPVDGSPGRAVTTLCVTW 345 A +LR +S G P + D + P+ L +P P + VD + R T C W Sbjct 334 AAILRNNNSYGLQQPPRLGADEVAKLPVSRVLDTRRYPSEPVSLVDVT--RDPVT-CAYW 390 Query 346 T-PAQPGAARVAFLAGSGPPVPLGGVPVTLAQADGRGPALDAVYLPPGRSAYVAA--RSL 402 + P + + LAGS PVP V L A G G V L G + Sbjct 391 SKPVGAATSSLTLLAGSALPVPDAVHTVELVGA-GNGGVATRVALAAGTGYFTQTVGGGP 449 Query 403 SGGGTGTRYLVTDTGVRFAIHDD--------DVAHDLGLPTAAIPAPWPVLATLPSGPEL 454 G G+ + V+DTGVR+ I ++ LGL +P PW VL+ GP L Sbjct 450 DAPGAGSLFWVSDTGVRYGIDNEPQGVAGGGKAVEALGLNPPPVPIPWSVLSLFVPGPTL 509 Query 455 SRANASVARDTVAP 468 SRA+A +A DT+ P Sbjct 510 SRADALLAHDTLVP 523 >gi|298523754|ref|ZP_07011163.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A] gi|298493548|gb|EFI28842.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A] Length=538 Score = 219 bits (558), Expect = 8e-55, Method: Compositional matrix adjust. Identities = 175/494 (36%), Positives = 247/494 (50%), Gaps = 40/494 (8%) Query 7 TWLHVSGYRFLLRRIECALLFGDVCAATGALRARTTSLALGCVLAIVAAMGCAFVALLRP 66 T V+G+RF++RRI + D LR ++ ++ +G ++ I +G +L+RP Sbjct 38 TRHQVTGWRFVMRRIAAGIALHDTRMLVDPLRTQSRAVLMGVLIVITGLIGSFVFSLIRP 97 Query 67 QSALGQAPIVMGRESGALYVRVDDVWHPVLNLASARLIAATNANPQPVSESELGHTKRGP 126 G ++ R + ALYVRV + HPVLNL SARLI +P V +EL RG Sbjct 98 NGQAGSNAVLADRSTAALYVRVGEQLHPVLNLTSARLIVGRPVSPTTVKSTELDQFPRGN 157 Query 127 LLGIPGAPQLLDQPLAGAESAWAICDSDN--------GGSTTVVVGPAEDSSAQ--VLTA 176 L+GIPGAP+ + Q + ++ W +CD N G TV+ GP ED+ A+ L Sbjct 158 LIGIPGAPERMVQNTS-TDANWTVCDGLNAPSRGGADGVGVTVIAGPLEDTGARAAALGP 216 Query 177 EQMILVATESGSPTYLLYGGRRAVVDLADPAVVWALRLQGRV--PHVVAQSLLNAVPEAP 234 Q +LV +SG+ T+LL+ G+R+ +DLAD AV L L V P ++A L NA+PEAP Sbjct 217 GQAVLV--DSGAGTWLLWDGKRSPIDLADHAVTSGLGLGADVPAPRIIASGLFNAIPEAP 274 Query 235 RITAPRIRGGGR-ASVGLPGFLVGGVVR--ITRASGD------EYYVVLEDGVQRIGQVA 285 +TAP I G AS G+P +G VV + SG +YY VL DG+Q+I V Sbjct 275 PLTAPIIPDAGNPASFGVPA-PIGAVVSSYALKDSGKAISDTVQYYAVLPDGLQQISPVL 333 Query 286 ADLLRFGDSQGSVNVPTVAPDVIRVAPIVNTLPVSAFPDRPPTPVDGSPGRAVTTLCVTW 345 A +LR +S G P + D + P+ L +P P + VD + R T C W Sbjct 334 AAILRNNNSYGLQQPPRLGADEVAKLPVSRVLDTRRYPSEPVSLVDVT--RDPVT-CAYW 390 Query 346 T-PAQPGAARVAFLAGSGPPVPLGGVPVTLAQADGRGPALDAVYLPPGRSAYVAA--RSL 402 + P + + LAGS PVP V L A G G V L G + Sbjct 391 SKPVGAATSSLTLLAGSALPVPDAVHTVELVGA-GNGGVATRVALAAGTGYFTQTVGGGP 449 Query 403 SGGGTGTRYLVTDTGVRFAIHDD--------DVAHDLGLPTAAIPAPWPVLATLPSGPEL 454 G G+ + V+DTGVR+ I ++ LGL +P PW VL+ GP L Sbjct 450 DAPGAGSLFWVSDTGVRYGIDNEPQGVAGGGKAVEALGLNPPPVPIPWSVLSLFVPGPTL 509 Query 455 SRANASVARDTVAP 468 SRA+A +A DT+ P Sbjct 510 SRADALLAHDTLVP 523 >gi|15607424|ref|NP_214797.1| hypothetical protein Rv0283 [Mycobacterium tuberculosis H37Rv] gi|15839669|ref|NP_334706.1| hypothetical protein MT0296 [Mycobacterium tuberculosis CDC1551] gi|31791462|ref|NP_853955.1| hypothetical protein Mb0291 [Mycobacterium bovis AF2122/97] 68 more sequence titles Length=538 Score = 219 bits (558), Expect = 9e-55, Method: Compositional matrix adjust. Identities = 175/494 (36%), Positives = 247/494 (50%), Gaps = 40/494 (8%) Query 7 TWLHVSGYRFLLRRIECALLFGDVCAATGALRARTTSLALGCVLAIVAAMGCAFVALLRP 66 T V+G+RF++RRI + D LR ++ ++ +G ++ I +G +L+RP Sbjct 38 TRHQVTGWRFVMRRIAAGIALHDTRMLVDPLRTQSRAVLMGVLIVITGLIGSFVFSLIRP 97 Query 67 QSALGQAPIVMGRESGALYVRVDDVWHPVLNLASARLIAATNANPQPVSESELGHTKRGP 126 G ++ R + ALYVRV + HPVLNL SARLI +P V +EL RG Sbjct 98 NGQAGSNAVLADRSTAALYVRVGEQLHPVLNLTSARLIVGRPVSPTTVKSTELDQFPRGN 157 Query 127 LLGIPGAPQLLDQPLAGAESAWAICDSDN--------GGSTTVVVGPAEDSSAQ--VLTA 176 L+GIPGAP+ + Q + ++ W +CD N G TV+ GP ED+ A+ L Sbjct 158 LIGIPGAPERMVQNTS-TDANWTVCDGLNAPSRGGADGVGVTVIAGPLEDTGARAAALGP 216 Query 177 EQMILVATESGSPTYLLYGGRRAVVDLADPAVVWALRLQGRV--PHVVAQSLLNAVPEAP 234 Q +LV +SG+ T+LL+ G+R+ +DLAD AV L L V P ++A L NA+PEAP Sbjct 217 GQAVLV--DSGAGTWLLWDGKRSPIDLADHAVTSGLGLGADVPAPRIIASGLFNAIPEAP 274 Query 235 RITAPRIRGGGR-ASVGLPGFLVGGVVR--ITRASGD------EYYVVLEDGVQRIGQVA 285 +TAP I G AS G+P +G VV + SG +YY VL DG+Q+I V Sbjct 275 PLTAPIIPDAGNPASFGVPA-PIGAVVSSYALKDSGKTISDTVQYYAVLPDGLQQISPVL 333 Query 286 ADLLRFGDSQGSVNVPTVAPDVIRVAPIVNTLPVSAFPDRPPTPVDGSPGRAVTTLCVTW 345 A +LR +S G P + D + P+ L +P P + VD + R T C W Sbjct 334 AAILRNNNSYGLQQPPRLGADEVAKLPVSRVLDTRRYPSEPVSLVDVT--RDPVT-CAYW 390 Query 346 T-PAQPGAARVAFLAGSGPPVPLGGVPVTLAQADGRGPALDAVYLPPGRSAYVAA--RSL 402 + P + + LAGS PVP V L A G G V L G + Sbjct 391 SKPVGAATSSLTLLAGSALPVPDAVHTVELVGA-GNGGVATRVALAAGTGYFTQTVGGGP 449 Query 403 SGGGTGTRYLVTDTGVRFAIHDD--------DVAHDLGLPTAAIPAPWPVLATLPSGPEL 454 G G+ + V+DTGVR+ I ++ LGL +P PW VL+ GP L Sbjct 450 DAPGAGSLFWVSDTGVRYGIDNEPQGVAGGGKAVEALGLNPPPVPIPWSVLSLFVPGPTL 509 Query 455 SRANASVARDTVAP 468 SRA+A +A DT+ P Sbjct 510 SRADALLAHDTLVP 523 >gi|333988931|ref|YP_004521545.1| hypothetical protein JDM601_0291 [Mycobacterium sp. JDM601] gi|333484899|gb|AEF34291.1| conserved hypothetical protein [Mycobacterium sp. JDM601] Length=540 Score = 219 bits (557), Expect = 1e-54, Method: Compositional matrix adjust. Identities = 172/489 (36%), Positives = 240/489 (50%), Gaps = 33/489 (6%) Query 7 TWLHVSGYRFLLRRIECALLFGDVCAATGALRARTTSLALGCVLAIVAAMGCAFVALLRP 66 T VSG+RF++RRI + D LR++ ++ +G ++ A GC L+ P Sbjct 37 TKHQVSGWRFVMRRIASGVALHDTRMLVEPLRSQARAVLMGLLVLATVAGGCFVFTLIWP 96 Query 67 QSALGQAPIVMGRESGALYVRVDDVWHPVLNLASARLIAATNANPQPVSESELGHTKRGP 126 SA P++ + + ALYVRV D HPVLNL SARLIA NP V + L RG Sbjct 97 NSAAANDPVLADKSTSALYVRVGDQLHPVLNLTSARLIAGRPVNPTAVKSAGLDKIPRGN 156 Query 127 LLGIPGAPQLLDQPLAGAESAWAICDSDNGGS--TTVVVGPAED--SSAQVLTAEQMILV 182 L+GIPGAP+ + Q + ++ W +CDS G TV+ GP D S A L A Q++L Sbjct 157 LIGIPGAPERMVQNTS-RDADWTVCDSVAGSEAGVTVIGGPLGDGGSRAGALDAHQVVLA 215 Query 183 ATESGSPTYLLYGGRRAVVDLADPAVVWALRLQGR-----VPHVVAQSLLNAVPEAPRIT 237 ++GS +LL+ G+R+ +DLAD A+ AL L + P ++ L N +PEAP +T Sbjct 216 --DNGSGAWLLWDGKRSRIDLADRAITGALGLGEKGTAVPTPRSISTGLFNVIPEAPPLT 273 Query 238 APRIRGGG-RASVGLPGFL-VGGVVRITRASGDE-----YYVVLEDGVQRIGQVAADLLR 290 AP I G G + S LP VG V+ G+E YY VL DG+Q I V A +LR Sbjct 274 APVIPGAGDKPSFDLPADAPVGAVMAAHALEGNEQGTLRYYAVLPDGLQPISGVVAAVLR 333 Query 291 FGDSQGSVNVPTVAPDVIRVAPIVNTLPVSAFPDRPPTPVDGSPGRAVTTLCVTWTPAQP 350 DS G P + D + P+ + L VS FP++P + +D A C W+ Sbjct 334 NTDSHGLDRPPLLGADDVARLPVSHALDVSRFPEQPVSVIDSV---ADPLTCAHWSRPAG 390 Query 351 GAARVAFLAGSGPPVPLGGVPVTLAQADGRGPALDAVYLPPGRSAYVAARS---LSGGGT 407 + L GV G G V L PG +V + S + Sbjct 391 ASTSSLTLLSGSSLPLRDGVRTLDLVGAGVGGTAARVALAPGTGYFVQSVSADPTADHSA 450 Query 408 GTRYLVTDTGVRFAIH--------DDDVAHDLGLPTAAIPAPWPVLATLPSGPELSRANA 459 G + + DTGVR+ ++ D D LGL A+P PW VL+ GP LSRA+A Sbjct 451 GPLFWIADTGVRYGVNTESGTAGSDGDTVAALGLSRPAVPIPWSVLSQFALGPTLSRADA 510 Query 460 SVARDTVAP 468 +A D +AP Sbjct 511 LLAHDGLAP 519 >gi|342859233|ref|ZP_08715887.1| hypothetical protein MCOL_10153 [Mycobacterium colombiense CECT 3035] gi|342133474|gb|EGT86677.1| hypothetical protein MCOL_10153 [Mycobacterium colombiense CECT 3035] Length=542 Score = 217 bits (553), Expect = 3e-54, Method: Compositional matrix adjust. Identities = 167/499 (34%), Positives = 248/499 (50%), Gaps = 45/499 (9%) Query 7 TWLHVSGYRFLLRRIECALLFGDVCAATGALRARTTSLALGCVLAIVAAMGCAFVALLRP 66 T V+G+RF++RRI + D LR ++ ++A+G VL + GC +L+RP Sbjct 34 TRHQVTGWRFVMRRIASGIALHDTRMLVDPLRTQSRAVAMGAVLLVTGLAGCFVFSLIRP 93 Query 67 QSALGQAPIVMGRESGALYVRVDDVWHPVLNLASARLIAATNANPQPVSESELGHTKRGP 126 +G ++ R + ALYVRV D HPVLNL SARLI +P V SEL RG Sbjct 94 SGTVGTNAVLADRSTAALYVRVGDDLHPVLNLTSARLITGHAVDPTMVKSSELDRFPRGN 153 Query 127 LLGIPGAPQLLDQPLAGAESAWAICDS----DNGGS------TTVVVGPAEDSSAQVLT- 175 L+GIPGAP+ + Q ++ W +CD+ GG TV+ G + S A+ T Sbjct 154 LIGIPGAPERMVQN-PSHDANWTVCDAVSEPAQGGHAAHSTGVTVIAGRPDSSGARAATI 212 Query 176 AEQMILVATESGSPTYLLYGGRRAVVDLADPAVVWALRLQGR-----VPHVVAQSLLNAV 230 A Q ++ GS T+LL+ G+R+ ++L D A+ AL L P +A L NA+ Sbjct 213 ASQQAILVDRDGS-TWLLWDGKRSQINLTDHAITNALGLGQNNSEVPAPRPIALGLFNAI 271 Query 231 PEAPRITAPRI-RGGGRASVGLP----GFLVGGVVRITRASGDEYYVVLEDGVQRIGQVA 285 PEAP +TAP I G A +P +V + + + YY V+ DG+Q+I V Sbjct 272 PEAPPLTAPGIPSAGAPAPFSVPAPIGAVVVSYALEQSSSGTPRYYAVMPDGLQQISPVL 331 Query 286 ADLLRFGDSQGSVNVPTVAPDVIRVAPIVNTLPVSAFPDRPPTPVDGSPGRAVTTLCVTW 345 A +LR +S G P + D + P+ L + +PD+ + VD + C W Sbjct 332 AAILRNTNSYGLDQPPRLGADAVAKLPVSRMLDTARYPDQQVSVVDAAKS---PVTCAYW 388 Query 346 T-PAQPGAARVAFLAGSGPPVPLGGVPVTL-AQADGRGPALDAVYLPPGRSAYVAARSLS 403 + PA + + ++GS P+P V L A G V L PG + +++ Sbjct 389 SKPAGAATSSLRLMSGSALPIPESIRTVDLVGGAATNGLVATRVALAPGTGYFT--QTVG 446 Query 404 GG----GTGTRYLVTDTGVRFAIHDDDVAHD----------LGLPTAAIPAPWPVLATLP 449 GG GTG+ + V+DTGVR+ I D++ H LGL + +P PW VL+ Sbjct 447 GGPDSPGTGSLFWVSDTGVRYGI-DNESEHSAAGHGKTVEALGLNGSPVPVPWSVLSLFA 505 Query 450 SGPELSRANASVARDTVAP 468 +GP LSRA+A +A D + P Sbjct 506 NGPTLSRADALLAHDGLTP 524 >gi|326381475|ref|ZP_08203169.1| hypothetical protein SCNU_00950 [Gordonia neofelifaecis NRRL B-59395] gi|326199722|gb|EGD56902.1| hypothetical protein SCNU_00950 [Gordonia neofelifaecis NRRL B-59395] Length=467 Score = 214 bits (546), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 172/475 (37%), Positives = 237/475 (50%), Gaps = 28/475 (5%) Query 6 TTWLHVSGYRFLLRRIECALLFGDVCAATGALRARTTSLALGCVLAIVAAMGCAFVALLR 65 TT VSGYRF + R AL+ DV +R+++ SL G V+A++ G A L+R Sbjct 6 TTRAQVSGYRFGVARATHALVRHDVRMTHDPMRSQSRSLLAGAVVALLVVAGAAVYGLVR 65 Query 66 PQSALGQAPIVMGRESGALYVRVDDVWHPVLNLASARLIAATNANPQPVSESELGHTKRG 125 PQ ++G A IV + G LYV +DDV HPV NLASARLI + S++ L RG Sbjct 66 PQPSVGDAQIVAA-DGGGLYVLLDDVMHPVPNLASARLILGQPLPVRRASDASLAGYPRG 124 Query 126 PLLGIPGAPQLLDQPLAGAESAWAICDSDNGGSTTVVVGPAEDSSAQVLTAEQMILVATE 185 +GI GAP +L P S W +C+ G + V+ G + + L AE + E Sbjct 125 AEVGIVGAPGVLAGPADPDRSTWTVCEDAQG--SAVIAGALDPTLTDPLDAELV-----E 177 Query 186 SGSPTYLLY-----GGR----RAVVDLADPAVVWALRLQGRVPHVVAQSLLNAVPEAPRI 236 +LLY GG RA VDL+ P ++ +L L V LL+++P + Sbjct 178 HAGTAWLLYSVPGPGGTSVPVRAPVDLSRPELIRSLGLADATAREVGAGLLSSLPARAEL 237 Query 237 TAPRIRG-GGRASVGLPGFLVGGVVRITRASGDEYYVVLEDGVQRIGQVAADLLRFGDSQ 295 P + G GG +G+P V V + S Y++VL D VQ + + AA+++R D Sbjct 238 RVPEVPGRGGPGVLGMPVGTVVATVAVDGTSA--YHLVLRDAVQPLSEPAAEMMRLADPD 295 Query 296 GSVNVPTVAPDVIRVAPIVNTLPVSAFPDRPPTPVDGSPGRAVTTLCVTWTPAQPGA-AR 354 + V VAP + P +P+ FP RPP D R LC W+ G A Sbjct 296 AADRVRRVAPGAVAALPEREEVPLGDFPARPPRVAD----RPSPALCHRWSRDADGEFAT 351 Query 355 VAFLAGSGPPVPLGGVPVTLAQADGRGPALDAVYLPPGRSAYVAARSLSGGG--TGTRYL 412 LA P+P G V LA ADG GPALD V++PPG A++ + T Y Sbjct 352 AELLAARKLPIPSGAQAVRLASADGPGPALDRVFVPPGSGAHIVLTGVEPDSPRAATPYY 411 Query 413 VTDTGVRFAIHDDDVAHDLGLPTAAIPAPWPVLATLPSGPELSRANASVARDTVA 467 V+D GVR+ + V LGLP + APWP++A LP G ELSR A+V RD V+ Sbjct 412 VSDAGVRYRLSGGGVGQMLGLPD-PMRAPWPMIALLPEGLELSREAAAVMRDAVS 465 >gi|15828367|ref|NP_302630.1| hypothetical protein ML2536 [Mycobacterium leprae TN] gi|221230844|ref|YP_002504260.1| hypothetical protein MLBr_02536 [Mycobacterium leprae Br4923] gi|13093797|emb|CAC32067.1| conserved membrane protein [Mycobacterium leprae] gi|219933951|emb|CAR72635.1| conserved membrane protein [Mycobacterium leprae Br4923] Length=552 Score = 214 bits (544), Expect = 3e-53, Method: Compositional matrix adjust. Identities = 168/502 (34%), Positives = 244/502 (49%), Gaps = 48/502 (9%) Query 10 HVSGYRFLLRRIECALLFGDVCAATGALRARTTSLALGCVLAIVAAMGCAFVALLRPQSA 69 V+G+RF++RRI + D LR ++ S+ +G +L I +GC + +RP A Sbjct 41 QVTGWRFVMRRIASGIALHDTRMLVDPLRTQSRSVLVGALLVITGLIGCFVFSFIRPNGA 100 Query 70 LGQAPIVMGRESGALYVRVDDVWHPVLNLASARLIAATNANPQPVSESELGHTKRGPLLG 129 G ++ R + ALYVRV D HPVLNL SARLI + NP V SEL RG L+G Sbjct 101 AGNNAVLADRSTAALYVRVGDELHPVLNLTSARLIVGRSVNPITVKSSELDRFPRGNLIG 160 Query 130 IPGAPQLLDQPLAGAESAWAICD--SDNGGS------TTVVVGPAEDSS--AQVLTAEQM 179 IPGAP+ + Q ++ W +CD S GG TV+ GP + A VL + Sbjct 161 IPGAPERMVQNTT-HDANWTVCDVVSGEGGHAAHSMGVTVIAGPPDSHGMRAAVLGSAHG 219 Query 180 ILVA--TESGSPTYLLYGGRRAVVDLADPAVVWALRL-----QGRVPHVVAQSLLNAVPE 232 +LV +E G T+LL+ G+R+ +DLAD AV AL + P + L NA+PE Sbjct 220 VLVDAPSERGGSTWLLWDGKRSEIDLADHAVTDALGFGVGFAEVPAPRPIGAGLFNAIPE 279 Query 233 APRITAPRIRGGG-------RASVGLPGFLVGGVVRITRASGD--EYYVVLEDGVQRIGQ 283 AP + AP I G RA +G + G+ + + D YY VL DG+Q I Sbjct 280 APPLKAPVIPNAGATPSFGVRAPIGAV-VVSFGLAALGKNPYDSVRYYAVLPDGLQPISP 338 Query 284 VAADLLRFGDSQGSVNVPTVAPDVIRVAPIVNTLPVSAFPDRPPTPVDGSPGRAVTTLCV 343 V A +LR +S G P + D + P+ L +P++ + +D G A + C Sbjct 339 VLAAILRNINSYGLQQPPRLGADEVDKLPVSRMLDTERYPEQQISLIDA--GYAPVS-CA 395 Query 344 TWT-PAQPGAARVAFLAGSGPPVPLGGVPVTLAQADGRGPALDA--VYLPPGRSAYVAAR 400 W+ PA + ++ ++G+ PVP V L A RG + A V L PG + Sbjct 396 YWSKPAGAATSFLSLMSGAALPVPDAARAVELVSAPSRGDSSTASRVVLTPGTGYFAQTV 455 Query 401 SLSGG--GTGTRYLVTDTGVRFAIHDD------------DVAHDLGLPTAAIPAPWPVLA 446 + T + + V+DTGVR+ I + + LGL A+P PW +L+ Sbjct 456 GVGSAAPATASLFWVSDTGVRYGIDTEADARSEATAGPGKIVEALGLKLPAVPIPWSILS 515 Query 447 TLPSGPELSRANASVARDTVAP 468 GP LSRA+A + D +AP Sbjct 516 LFAVGPTLSRADALLEHDGLAP 537 Lambda K H 0.319 0.136 0.413 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 994746070878 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40