BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv3454 Length=422 Score E Sequences producing significant alignments: (Bits) Value gi|339296277|gb|AEJ48388.1| putative transmembrane protein [Myco... 864 0.0 gi|15843049|ref|NP_338086.1| hypothetical protein MT3561 [Mycoba... 863 0.0 gi|289576190|ref|ZP_06456417.1| allantoin family purine permease... 863 0.0 gi|121639374|ref|YP_979598.1| putative transmembrane protein [My... 863 0.0 gi|31794630|ref|NP_857123.1| transmembrane protein [Mycobacteriu... 863 0.0 gi|289555725|ref|ZP_06444935.1| LOW QUALITY PROTEIN: conserved m... 862 0.0 gi|148663319|ref|YP_001284842.1| hypothetical protein MRA_3495 [... 862 0.0 gi|15610590|ref|NP_217971.1| integral membrane protein [Mycobact... 860 0.0 gi|289752178|ref|ZP_06511556.1| conserved membrane protein [Myco... 860 0.0 gi|289449158|ref|ZP_06438902.1| permease [Mycobacterium tubercul... 859 0.0 gi|340628425|ref|YP_004746877.1| putative integral membrane prot... 856 0.0 gi|167967304|ref|ZP_02549581.1| putative transmembrane protein [... 837 0.0 gi|183981116|ref|YP_001849407.1| hypothetical protein MMAR_1096 ... 728 0.0 gi|296165080|ref|ZP_06847633.1| sensor histidine kinase/response... 715 0.0 gi|240167788|ref|ZP_04746447.1| hypothetical protein MkanA1_0063... 702 0.0 gi|111223595|ref|YP_714389.1| hypothetical protein FRAAL4195 [Fr... 654 0.0 gi|331699217|ref|YP_004335456.1| hypothetical protein Psed_5470 ... 650 0.0 gi|336119093|ref|YP_004573867.1| hypothetical protein MLP_34500 ... 634 9e-180 gi|169629720|ref|YP_001703369.1| hypothetical protein MAB_2635c ... 620 1e-175 gi|226303979|ref|YP_002763937.1| hypothetical protein RER_04900 ... 616 2e-174 gi|324999150|ref|ZP_08120262.1| hypothetical protein PseP1_10316... 616 3e-174 gi|229494812|ref|ZP_04388568.1| sensor histidine kinase/response... 615 5e-174 gi|258650858|ref|YP_003200014.1| cytosine/purines, uracil, thiam... 596 3e-168 gi|119963649|ref|YP_946880.1| hypothetical protein AAur_1092 [Ar... 587 1e-165 gi|220911760|ref|YP_002487069.1| cytosine/purines uracil thiamin... 585 4e-165 gi|309812909|ref|ZP_07706637.1| permease, cytosine/purine, uraci... 585 5e-165 gi|325962322|ref|YP_004240228.1| purine-cytosine permease-like t... 572 4e-161 gi|326383210|ref|ZP_08204898.1| hypothetical protein SCNU_09749 ... 565 5e-159 gi|262201257|ref|YP_003272465.1| hypothetical protein Gbro_1280 ... 563 2e-158 gi|290955741|ref|YP_003486923.1| protein [Streptomyces scabiei 8... 549 3e-154 gi|296141085|ref|YP_003648328.1| cytosine/purines uracil thiamin... 549 4e-154 gi|317508921|ref|ZP_07966558.1| hypothetical protein HMPREF9336_... 547 1e-153 gi|326775467|ref|ZP_08234732.1| hypothetical protein SACT1_1277 ... 538 9e-151 gi|182434950|ref|YP_001822669.1| hypothetical protein SGR_1157 [... 537 2e-150 gi|333028915|ref|ZP_08456979.1| hypothetical protein STTU_6419 [... 535 4e-150 gi|239991899|ref|ZP_04712563.1| hypothetical protein SrosN1_3165... 535 4e-150 gi|302517405|ref|ZP_07269747.1| permease for cytosine/purines ur... 535 5e-150 gi|318058952|ref|ZP_07977675.1| integral membrane protein [Strep... 535 7e-150 gi|296395010|ref|YP_003659894.1| hypothetical protein Srot_2629 ... 532 5e-149 gi|294633496|ref|ZP_06712055.1| sensor histidine kinase/response... 531 8e-149 gi|302549223|ref|ZP_07301565.1| permease for cytosine/purines ur... 523 2e-146 gi|297153537|gb|ADI03249.1| putative integral membrane protein [... 522 5e-146 gi|170782693|ref|YP_001711027.1| putative integral membrane prot... 516 4e-144 gi|237785396|ref|YP_002906101.1| hypothetical protein ckrop_0802... 503 2e-140 gi|325121838|gb|ADY81361.1| signal transduction histidine kinase... 494 1e-137 gi|227549920|ref|ZP_03979969.1| permease for cytosine/purines ur... 491 8e-137 gi|299770582|ref|YP_003732608.1| hypothetical protein AOLE_11730... 487 1e-135 gi|293608424|ref|ZP_06690727.1| conserved hypothetical protein [... 485 7e-135 gi|262379604|ref|ZP_06072760.1| sensor histidine kinase/response... 484 1e-134 gi|255318189|ref|ZP_05359428.1| periplasmic sensor hybrid histid... 484 1e-134 >gi|339296277|gb|AEJ48388.1| putative transmembrane protein [Mycobacterium tuberculosis CCDC5079] gi|339299880|gb|AEJ51990.1| putative transmembrane protein [Mycobacterium tuberculosis CCDC5180] Length=517 Score = 864 bits (2232), Expect = 0.0, Method: Compositional matrix adjust. Identities = 422/422 (100%), Positives = 422/422 (100%), Gaps = 0/422 (0%) Query 1 MAQGLKLGLHIPLWAGYACSTLIIFPLVVYGMKVLSQLQLWTTPLWLILMAAPFGYLVVS 60 MAQGLKLGLHIPLWAGYACSTLIIFPLVVYGMKVLSQLQLWTTPLWLILMAAPFGYLVVS Sbjct 96 MAQGLKLGLHIPLWAGYACSTLIIFPLVVYGMKVLSQLQLWTTPLWLILMAAPFGYLVVS 155 Query 61 HPDSIGQFFSYAGKDGHGGLSFGSVLLAAGVCLSLIAQIAEQIDYLRFMPPRTPENANRW 120 HPDSIGQFFSYAGKDGHGGLSFGSVLLAAGVCLSLIAQIAEQIDYLRFMPPRTPENANRW Sbjct 156 HPDSIGQFFSYAGKDGHGGLSFGSVLLAAGVCLSLIAQIAEQIDYLRFMPPRTPENANRW 215 Query 121 WTWTLLAGPGWVAFGATKQIIGLFLAVYLMANIPGSSTIANQPVHQFMQIYRTFVPGWLA 180 WTWTLLAGPGWVAFGATKQIIGLFLAVYLMANIPGSSTIANQPVHQFMQIYRTFVPGWLA Sbjct 216 WTWTLLAGPGWVAFGATKQIIGLFLAVYLMANIPGSSTIANQPVHQFMQIYRTFVPGWLA 275 Query 181 LTLAVILVVLSQIKINVTNAYSGSLAWTNSFTRLTKHYPGRVVFLGVNLAIALILMEANM 240 LTLAVILVVLSQIKINVTNAYSGSLAWTNSFTRLTKHYPGRVVFLGVNLAIALILMEANM Sbjct 276 LTLAVILVVLSQIKINVTNAYSGSLAWTNSFTRLTKHYPGRVVFLGVNLAIALILMEANM 335 Query 241 FDFLNTILGCYANCGMAWVVAVASDIGFNKYLLGLSPKTPEFRRGMLYAINPVGFGSLLL 300 FDFLNTILGCYANCGMAWVVAVASDIGFNKYLLGLSPKTPEFRRGMLYAINPVGFGSLLL Sbjct 336 FDFLNTILGCYANCGMAWVVAVASDIGFNKYLLGLSPKTPEFRRGMLYAINPVGFGSLLL 395 Query 301 AAGLSIVTFFGGLGAALQPYSPLVAIVTALVMPPILAAATKGKYYLRRTHDGIDLPMYDE 360 AAGLSIVTFFGGLGAALQPYSPLVAIVTALVMPPILAAATKGKYYLRRTHDGIDLPMYDE Sbjct 396 AAGLSIVTFFGGLGAALQPYSPLVAIVTALVMPPILAAATKGKYYLRRTHDGIDLPMYDE 455 Query 361 HGNPSAAVLTCHVCHQDFERPDMLACQTHGAHVCSLCLSTDKQAEHVLPGLARAHIPGDQ 420 HGNPSAAVLTCHVCHQDFERPDMLACQTHGAHVCSLCLSTDKQAEHVLPGLARAHIPGDQ Sbjct 456 HGNPSAAVLTCHVCHQDFERPDMLACQTHGAHVCSLCLSTDKQAEHVLPGLARAHIPGDQ 515 Query 421 VP 422 VP Sbjct 516 VP 517 >gi|15843049|ref|NP_338086.1| hypothetical protein MT3561 [Mycobacterium tuberculosis CDC1551] gi|298526938|ref|ZP_07014347.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A] gi|13883393|gb|AAK47900.1| hypothetical protein MT3561 [Mycobacterium tuberculosis CDC1551] gi|298496732|gb|EFI32026.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A] Length=562 Score = 863 bits (2231), Expect = 0.0, Method: Compositional matrix adjust. Identities = 422/422 (100%), Positives = 422/422 (100%), Gaps = 0/422 (0%) Query 1 MAQGLKLGLHIPLWAGYACSTLIIFPLVVYGMKVLSQLQLWTTPLWLILMAAPFGYLVVS 60 MAQGLKLGLHIPLWAGYACSTLIIFPLVVYGMKVLSQLQLWTTPLWLILMAAPFGYLVVS Sbjct 141 MAQGLKLGLHIPLWAGYACSTLIIFPLVVYGMKVLSQLQLWTTPLWLILMAAPFGYLVVS 200 Query 61 HPDSIGQFFSYAGKDGHGGLSFGSVLLAAGVCLSLIAQIAEQIDYLRFMPPRTPENANRW 120 HPDSIGQFFSYAGKDGHGGLSFGSVLLAAGVCLSLIAQIAEQIDYLRFMPPRTPENANRW Sbjct 201 HPDSIGQFFSYAGKDGHGGLSFGSVLLAAGVCLSLIAQIAEQIDYLRFMPPRTPENANRW 260 Query 121 WTWTLLAGPGWVAFGATKQIIGLFLAVYLMANIPGSSTIANQPVHQFMQIYRTFVPGWLA 180 WTWTLLAGPGWVAFGATKQIIGLFLAVYLMANIPGSSTIANQPVHQFMQIYRTFVPGWLA Sbjct 261 WTWTLLAGPGWVAFGATKQIIGLFLAVYLMANIPGSSTIANQPVHQFMQIYRTFVPGWLA 320 Query 181 LTLAVILVVLSQIKINVTNAYSGSLAWTNSFTRLTKHYPGRVVFLGVNLAIALILMEANM 240 LTLAVILVVLSQIKINVTNAYSGSLAWTNSFTRLTKHYPGRVVFLGVNLAIALILMEANM Sbjct 321 LTLAVILVVLSQIKINVTNAYSGSLAWTNSFTRLTKHYPGRVVFLGVNLAIALILMEANM 380 Query 241 FDFLNTILGCYANCGMAWVVAVASDIGFNKYLLGLSPKTPEFRRGMLYAINPVGFGSLLL 300 FDFLNTILGCYANCGMAWVVAVASDIGFNKYLLGLSPKTPEFRRGMLYAINPVGFGSLLL Sbjct 381 FDFLNTILGCYANCGMAWVVAVASDIGFNKYLLGLSPKTPEFRRGMLYAINPVGFGSLLL 440 Query 301 AAGLSIVTFFGGLGAALQPYSPLVAIVTALVMPPILAAATKGKYYLRRTHDGIDLPMYDE 360 AAGLSIVTFFGGLGAALQPYSPLVAIVTALVMPPILAAATKGKYYLRRTHDGIDLPMYDE Sbjct 441 AAGLSIVTFFGGLGAALQPYSPLVAIVTALVMPPILAAATKGKYYLRRTHDGIDLPMYDE 500 Query 361 HGNPSAAVLTCHVCHQDFERPDMLACQTHGAHVCSLCLSTDKQAEHVLPGLARAHIPGDQ 420 HGNPSAAVLTCHVCHQDFERPDMLACQTHGAHVCSLCLSTDKQAEHVLPGLARAHIPGDQ Sbjct 501 HGNPSAAVLTCHVCHQDFERPDMLACQTHGAHVCSLCLSTDKQAEHVLPGLARAHIPGDQ 560 Query 421 VP 422 VP Sbjct 561 VP 562 >gi|289576190|ref|ZP_06456417.1| allantoin family purine permease [Mycobacterium tuberculosis K85] gi|289540621|gb|EFD45199.1| allantoin family purine permease [Mycobacterium tuberculosis K85] Length=561 Score = 863 bits (2230), Expect = 0.0, Method: Compositional matrix adjust. Identities = 422/422 (100%), Positives = 422/422 (100%), Gaps = 0/422 (0%) Query 1 MAQGLKLGLHIPLWAGYACSTLIIFPLVVYGMKVLSQLQLWTTPLWLILMAAPFGYLVVS 60 MAQGLKLGLHIPLWAGYACSTLIIFPLVVYGMKVLSQLQLWTTPLWLILMAAPFGYLVVS Sbjct 140 MAQGLKLGLHIPLWAGYACSTLIIFPLVVYGMKVLSQLQLWTTPLWLILMAAPFGYLVVS 199 Query 61 HPDSIGQFFSYAGKDGHGGLSFGSVLLAAGVCLSLIAQIAEQIDYLRFMPPRTPENANRW 120 HPDSIGQFFSYAGKDGHGGLSFGSVLLAAGVCLSLIAQIAEQIDYLRFMPPRTPENANRW Sbjct 200 HPDSIGQFFSYAGKDGHGGLSFGSVLLAAGVCLSLIAQIAEQIDYLRFMPPRTPENANRW 259 Query 121 WTWTLLAGPGWVAFGATKQIIGLFLAVYLMANIPGSSTIANQPVHQFMQIYRTFVPGWLA 180 WTWTLLAGPGWVAFGATKQIIGLFLAVYLMANIPGSSTIANQPVHQFMQIYRTFVPGWLA Sbjct 260 WTWTLLAGPGWVAFGATKQIIGLFLAVYLMANIPGSSTIANQPVHQFMQIYRTFVPGWLA 319 Query 181 LTLAVILVVLSQIKINVTNAYSGSLAWTNSFTRLTKHYPGRVVFLGVNLAIALILMEANM 240 LTLAVILVVLSQIKINVTNAYSGSLAWTNSFTRLTKHYPGRVVFLGVNLAIALILMEANM Sbjct 320 LTLAVILVVLSQIKINVTNAYSGSLAWTNSFTRLTKHYPGRVVFLGVNLAIALILMEANM 379 Query 241 FDFLNTILGCYANCGMAWVVAVASDIGFNKYLLGLSPKTPEFRRGMLYAINPVGFGSLLL 300 FDFLNTILGCYANCGMAWVVAVASDIGFNKYLLGLSPKTPEFRRGMLYAINPVGFGSLLL Sbjct 380 FDFLNTILGCYANCGMAWVVAVASDIGFNKYLLGLSPKTPEFRRGMLYAINPVGFGSLLL 439 Query 301 AAGLSIVTFFGGLGAALQPYSPLVAIVTALVMPPILAAATKGKYYLRRTHDGIDLPMYDE 360 AAGLSIVTFFGGLGAALQPYSPLVAIVTALVMPPILAAATKGKYYLRRTHDGIDLPMYDE Sbjct 440 AAGLSIVTFFGGLGAALQPYSPLVAIVTALVMPPILAAATKGKYYLRRTHDGIDLPMYDE 499 Query 361 HGNPSAAVLTCHVCHQDFERPDMLACQTHGAHVCSLCLSTDKQAEHVLPGLARAHIPGDQ 420 HGNPSAAVLTCHVCHQDFERPDMLACQTHGAHVCSLCLSTDKQAEHVLPGLARAHIPGDQ Sbjct 500 HGNPSAAVLTCHVCHQDFERPDMLACQTHGAHVCSLCLSTDKQAEHVLPGLARAHIPGDQ 559 Query 421 VP 422 VP Sbjct 560 VP 561 >gi|121639374|ref|YP_979598.1| putative transmembrane protein [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224991870|ref|YP_002646559.1| putative transmembrane protein [Mycobacterium bovis BCG str. Tokyo 172] gi|254234046|ref|ZP_04927371.1| hypothetical protein TBCG_03391 [Mycobacterium tuberculosis C] 15 more sequence titles Length=561 Score = 863 bits (2230), Expect = 0.0, Method: Compositional matrix adjust. Identities = 422/422 (100%), Positives = 422/422 (100%), Gaps = 0/422 (0%) Query 1 MAQGLKLGLHIPLWAGYACSTLIIFPLVVYGMKVLSQLQLWTTPLWLILMAAPFGYLVVS 60 MAQGLKLGLHIPLWAGYACSTLIIFPLVVYGMKVLSQLQLWTTPLWLILMAAPFGYLVVS Sbjct 140 MAQGLKLGLHIPLWAGYACSTLIIFPLVVYGMKVLSQLQLWTTPLWLILMAAPFGYLVVS 199 Query 61 HPDSIGQFFSYAGKDGHGGLSFGSVLLAAGVCLSLIAQIAEQIDYLRFMPPRTPENANRW 120 HPDSIGQFFSYAGKDGHGGLSFGSVLLAAGVCLSLIAQIAEQIDYLRFMPPRTPENANRW Sbjct 200 HPDSIGQFFSYAGKDGHGGLSFGSVLLAAGVCLSLIAQIAEQIDYLRFMPPRTPENANRW 259 Query 121 WTWTLLAGPGWVAFGATKQIIGLFLAVYLMANIPGSSTIANQPVHQFMQIYRTFVPGWLA 180 WTWTLLAGPGWVAFGATKQIIGLFLAVYLMANIPGSSTIANQPVHQFMQIYRTFVPGWLA Sbjct 260 WTWTLLAGPGWVAFGATKQIIGLFLAVYLMANIPGSSTIANQPVHQFMQIYRTFVPGWLA 319 Query 181 LTLAVILVVLSQIKINVTNAYSGSLAWTNSFTRLTKHYPGRVVFLGVNLAIALILMEANM 240 LTLAVILVVLSQIKINVTNAYSGSLAWTNSFTRLTKHYPGRVVFLGVNLAIALILMEANM Sbjct 320 LTLAVILVVLSQIKINVTNAYSGSLAWTNSFTRLTKHYPGRVVFLGVNLAIALILMEANM 379 Query 241 FDFLNTILGCYANCGMAWVVAVASDIGFNKYLLGLSPKTPEFRRGMLYAINPVGFGSLLL 300 FDFLNTILGCYANCGMAWVVAVASDIGFNKYLLGLSPKTPEFRRGMLYAINPVGFGSLLL Sbjct 380 FDFLNTILGCYANCGMAWVVAVASDIGFNKYLLGLSPKTPEFRRGMLYAINPVGFGSLLL 439 Query 301 AAGLSIVTFFGGLGAALQPYSPLVAIVTALVMPPILAAATKGKYYLRRTHDGIDLPMYDE 360 AAGLSIVTFFGGLGAALQPYSPLVAIVTALVMPPILAAATKGKYYLRRTHDGIDLPMYDE Sbjct 440 AAGLSIVTFFGGLGAALQPYSPLVAIVTALVMPPILAAATKGKYYLRRTHDGIDLPMYDE 499 Query 361 HGNPSAAVLTCHVCHQDFERPDMLACQTHGAHVCSLCLSTDKQAEHVLPGLARAHIPGDQ 420 HGNPSAAVLTCHVCHQDFERPDMLACQTHGAHVCSLCLSTDKQAEHVLPGLARAHIPGDQ Sbjct 500 HGNPSAAVLTCHVCHQDFERPDMLACQTHGAHVCSLCLSTDKQAEHVLPGLARAHIPGDQ 559 Query 421 VP 422 VP Sbjct 560 VP 561 >gi|31794630|ref|NP_857123.1| transmembrane protein [Mycobacterium bovis AF2122/97] gi|31620227|emb|CAD95670.1| PROBABLE CONSERVED TRANSMEMBRANE PROTEIN [Mycobacterium bovis AF2122/97] Length=561 Score = 863 bits (2229), Expect = 0.0, Method: Compositional matrix adjust. Identities = 421/422 (99%), Positives = 422/422 (100%), Gaps = 0/422 (0%) Query 1 MAQGLKLGLHIPLWAGYACSTLIIFPLVVYGMKVLSQLQLWTTPLWLILMAAPFGYLVVS 60 MAQGLKLGLHIPLWAGYACSTLIIFPLVVYGMKVLSQLQLWTTPLWLILMAAPFGYLVVS Sbjct 140 MAQGLKLGLHIPLWAGYACSTLIIFPLVVYGMKVLSQLQLWTTPLWLILMAAPFGYLVVS 199 Query 61 HPDSIGQFFSYAGKDGHGGLSFGSVLLAAGVCLSLIAQIAEQIDYLRFMPPRTPENANRW 120 HPDSIGQFFSYAGKDGHGGLSFGSVLLAAGVCLSLIAQIAEQIDYLRFMPPRTPENANRW Sbjct 200 HPDSIGQFFSYAGKDGHGGLSFGSVLLAAGVCLSLIAQIAEQIDYLRFMPPRTPENANRW 259 Query 121 WTWTLLAGPGWVAFGATKQIIGLFLAVYLMANIPGSSTIANQPVHQFMQIYRTFVPGWLA 180 WTWTLLAGPGWVAFGATKQIIGLFLAVYLMANIPGSSTIANQPVHQFMQIYRTFVPGWLA Sbjct 260 WTWTLLAGPGWVAFGATKQIIGLFLAVYLMANIPGSSTIANQPVHQFMQIYRTFVPGWLA 319 Query 181 LTLAVILVVLSQIKINVTNAYSGSLAWTNSFTRLTKHYPGRVVFLGVNLAIALILMEANM 240 LTLAVILV+LSQIKINVTNAYSGSLAWTNSFTRLTKHYPGRVVFLGVNLAIALILMEANM Sbjct 320 LTLAVILVILSQIKINVTNAYSGSLAWTNSFTRLTKHYPGRVVFLGVNLAIALILMEANM 379 Query 241 FDFLNTILGCYANCGMAWVVAVASDIGFNKYLLGLSPKTPEFRRGMLYAINPVGFGSLLL 300 FDFLNTILGCYANCGMAWVVAVASDIGFNKYLLGLSPKTPEFRRGMLYAINPVGFGSLLL Sbjct 380 FDFLNTILGCYANCGMAWVVAVASDIGFNKYLLGLSPKTPEFRRGMLYAINPVGFGSLLL 439 Query 301 AAGLSIVTFFGGLGAALQPYSPLVAIVTALVMPPILAAATKGKYYLRRTHDGIDLPMYDE 360 AAGLSIVTFFGGLGAALQPYSPLVAIVTALVMPPILAAATKGKYYLRRTHDGIDLPMYDE Sbjct 440 AAGLSIVTFFGGLGAALQPYSPLVAIVTALVMPPILAAATKGKYYLRRTHDGIDLPMYDE 499 Query 361 HGNPSAAVLTCHVCHQDFERPDMLACQTHGAHVCSLCLSTDKQAEHVLPGLARAHIPGDQ 420 HGNPSAAVLTCHVCHQDFERPDMLACQTHGAHVCSLCLSTDKQAEHVLPGLARAHIPGDQ Sbjct 500 HGNPSAAVLTCHVCHQDFERPDMLACQTHGAHVCSLCLSTDKQAEHVLPGLARAHIPGDQ 559 Query 421 VP 422 VP Sbjct 560 VP 561 >gi|289555725|ref|ZP_06444935.1| LOW QUALITY PROTEIN: conserved membrane protein [Mycobacterium tuberculosis KZN 605] gi|289440357|gb|EFD22850.1| LOW QUALITY PROTEIN: conserved membrane protein [Mycobacterium tuberculosis KZN 605] Length=455 Score = 862 bits (2226), Expect = 0.0, Method: Compositional matrix adjust. Identities = 422/422 (100%), Positives = 422/422 (100%), Gaps = 0/422 (0%) Query 1 MAQGLKLGLHIPLWAGYACSTLIIFPLVVYGMKVLSQLQLWTTPLWLILMAAPFGYLVVS 60 MAQGLKLGLHIPLWAGYACSTLIIFPLVVYGMKVLSQLQLWTTPLWLILMAAPFGYLVVS Sbjct 34 MAQGLKLGLHIPLWAGYACSTLIIFPLVVYGMKVLSQLQLWTTPLWLILMAAPFGYLVVS 93 Query 61 HPDSIGQFFSYAGKDGHGGLSFGSVLLAAGVCLSLIAQIAEQIDYLRFMPPRTPENANRW 120 HPDSIGQFFSYAGKDGHGGLSFGSVLLAAGVCLSLIAQIAEQIDYLRFMPPRTPENANRW Sbjct 94 HPDSIGQFFSYAGKDGHGGLSFGSVLLAAGVCLSLIAQIAEQIDYLRFMPPRTPENANRW 153 Query 121 WTWTLLAGPGWVAFGATKQIIGLFLAVYLMANIPGSSTIANQPVHQFMQIYRTFVPGWLA 180 WTWTLLAGPGWVAFGATKQIIGLFLAVYLMANIPGSSTIANQPVHQFMQIYRTFVPGWLA Sbjct 154 WTWTLLAGPGWVAFGATKQIIGLFLAVYLMANIPGSSTIANQPVHQFMQIYRTFVPGWLA 213 Query 181 LTLAVILVVLSQIKINVTNAYSGSLAWTNSFTRLTKHYPGRVVFLGVNLAIALILMEANM 240 LTLAVILVVLSQIKINVTNAYSGSLAWTNSFTRLTKHYPGRVVFLGVNLAIALILMEANM Sbjct 214 LTLAVILVVLSQIKINVTNAYSGSLAWTNSFTRLTKHYPGRVVFLGVNLAIALILMEANM 273 Query 241 FDFLNTILGCYANCGMAWVVAVASDIGFNKYLLGLSPKTPEFRRGMLYAINPVGFGSLLL 300 FDFLNTILGCYANCGMAWVVAVASDIGFNKYLLGLSPKTPEFRRGMLYAINPVGFGSLLL Sbjct 274 FDFLNTILGCYANCGMAWVVAVASDIGFNKYLLGLSPKTPEFRRGMLYAINPVGFGSLLL 333 Query 301 AAGLSIVTFFGGLGAALQPYSPLVAIVTALVMPPILAAATKGKYYLRRTHDGIDLPMYDE 360 AAGLSIVTFFGGLGAALQPYSPLVAIVTALVMPPILAAATKGKYYLRRTHDGIDLPMYDE Sbjct 334 AAGLSIVTFFGGLGAALQPYSPLVAIVTALVMPPILAAATKGKYYLRRTHDGIDLPMYDE 393 Query 361 HGNPSAAVLTCHVCHQDFERPDMLACQTHGAHVCSLCLSTDKQAEHVLPGLARAHIPGDQ 420 HGNPSAAVLTCHVCHQDFERPDMLACQTHGAHVCSLCLSTDKQAEHVLPGLARAHIPGDQ Sbjct 394 HGNPSAAVLTCHVCHQDFERPDMLACQTHGAHVCSLCLSTDKQAEHVLPGLARAHIPGDQ 453 Query 421 VP 422 VP Sbjct 454 VP 455 >gi|148663319|ref|YP_001284842.1| hypothetical protein MRA_3495 [Mycobacterium tuberculosis H37Ra] gi|148824664|ref|YP_001289418.1| integral membrane protein [Mycobacterium tuberculosis F11] gi|253800499|ref|YP_003033500.1| hypothetical protein TBMG_03502 [Mycobacterium tuberculosis KZN 1435] 18 more sequence titles Length=443 Score = 862 bits (2226), Expect = 0.0, Method: Compositional matrix adjust. Identities = 422/422 (100%), Positives = 422/422 (100%), Gaps = 0/422 (0%) Query 1 MAQGLKLGLHIPLWAGYACSTLIIFPLVVYGMKVLSQLQLWTTPLWLILMAAPFGYLVVS 60 MAQGLKLGLHIPLWAGYACSTLIIFPLVVYGMKVLSQLQLWTTPLWLILMAAPFGYLVVS Sbjct 22 MAQGLKLGLHIPLWAGYACSTLIIFPLVVYGMKVLSQLQLWTTPLWLILMAAPFGYLVVS 81 Query 61 HPDSIGQFFSYAGKDGHGGLSFGSVLLAAGVCLSLIAQIAEQIDYLRFMPPRTPENANRW 120 HPDSIGQFFSYAGKDGHGGLSFGSVLLAAGVCLSLIAQIAEQIDYLRFMPPRTPENANRW Sbjct 82 HPDSIGQFFSYAGKDGHGGLSFGSVLLAAGVCLSLIAQIAEQIDYLRFMPPRTPENANRW 141 Query 121 WTWTLLAGPGWVAFGATKQIIGLFLAVYLMANIPGSSTIANQPVHQFMQIYRTFVPGWLA 180 WTWTLLAGPGWVAFGATKQIIGLFLAVYLMANIPGSSTIANQPVHQFMQIYRTFVPGWLA Sbjct 142 WTWTLLAGPGWVAFGATKQIIGLFLAVYLMANIPGSSTIANQPVHQFMQIYRTFVPGWLA 201 Query 181 LTLAVILVVLSQIKINVTNAYSGSLAWTNSFTRLTKHYPGRVVFLGVNLAIALILMEANM 240 LTLAVILVVLSQIKINVTNAYSGSLAWTNSFTRLTKHYPGRVVFLGVNLAIALILMEANM Sbjct 202 LTLAVILVVLSQIKINVTNAYSGSLAWTNSFTRLTKHYPGRVVFLGVNLAIALILMEANM 261 Query 241 FDFLNTILGCYANCGMAWVVAVASDIGFNKYLLGLSPKTPEFRRGMLYAINPVGFGSLLL 300 FDFLNTILGCYANCGMAWVVAVASDIGFNKYLLGLSPKTPEFRRGMLYAINPVGFGSLLL Sbjct 262 FDFLNTILGCYANCGMAWVVAVASDIGFNKYLLGLSPKTPEFRRGMLYAINPVGFGSLLL 321 Query 301 AAGLSIVTFFGGLGAALQPYSPLVAIVTALVMPPILAAATKGKYYLRRTHDGIDLPMYDE 360 AAGLSIVTFFGGLGAALQPYSPLVAIVTALVMPPILAAATKGKYYLRRTHDGIDLPMYDE Sbjct 322 AAGLSIVTFFGGLGAALQPYSPLVAIVTALVMPPILAAATKGKYYLRRTHDGIDLPMYDE 381 Query 361 HGNPSAAVLTCHVCHQDFERPDMLACQTHGAHVCSLCLSTDKQAEHVLPGLARAHIPGDQ 420 HGNPSAAVLTCHVCHQDFERPDMLACQTHGAHVCSLCLSTDKQAEHVLPGLARAHIPGDQ Sbjct 382 HGNPSAAVLTCHVCHQDFERPDMLACQTHGAHVCSLCLSTDKQAEHVLPGLARAHIPGDQ 441 Query 421 VP 422 VP Sbjct 442 VP 443 >gi|15610590|ref|NP_217971.1| integral membrane protein [Mycobacterium tuberculosis H37Rv] gi|289755587|ref|ZP_06514965.1| conserved integral membrane protein [Mycobacterium tuberculosis EAS054] gi|289759617|ref|ZP_06518995.1| transmembrane protein [Mycobacterium tuberculosis T85] 8 more sequence titles Length=422 Score = 860 bits (2221), Expect = 0.0, Method: Compositional matrix adjust. Identities = 422/422 (100%), Positives = 422/422 (100%), Gaps = 0/422 (0%) Query 1 MAQGLKLGLHIPLWAGYACSTLIIFPLVVYGMKVLSQLQLWTTPLWLILMAAPFGYLVVS 60 MAQGLKLGLHIPLWAGYACSTLIIFPLVVYGMKVLSQLQLWTTPLWLILMAAPFGYLVVS Sbjct 1 MAQGLKLGLHIPLWAGYACSTLIIFPLVVYGMKVLSQLQLWTTPLWLILMAAPFGYLVVS 60 Query 61 HPDSIGQFFSYAGKDGHGGLSFGSVLLAAGVCLSLIAQIAEQIDYLRFMPPRTPENANRW 120 HPDSIGQFFSYAGKDGHGGLSFGSVLLAAGVCLSLIAQIAEQIDYLRFMPPRTPENANRW Sbjct 61 HPDSIGQFFSYAGKDGHGGLSFGSVLLAAGVCLSLIAQIAEQIDYLRFMPPRTPENANRW 120 Query 121 WTWTLLAGPGWVAFGATKQIIGLFLAVYLMANIPGSSTIANQPVHQFMQIYRTFVPGWLA 180 WTWTLLAGPGWVAFGATKQIIGLFLAVYLMANIPGSSTIANQPVHQFMQIYRTFVPGWLA Sbjct 121 WTWTLLAGPGWVAFGATKQIIGLFLAVYLMANIPGSSTIANQPVHQFMQIYRTFVPGWLA 180 Query 181 LTLAVILVVLSQIKINVTNAYSGSLAWTNSFTRLTKHYPGRVVFLGVNLAIALILMEANM 240 LTLAVILVVLSQIKINVTNAYSGSLAWTNSFTRLTKHYPGRVVFLGVNLAIALILMEANM Sbjct 181 LTLAVILVVLSQIKINVTNAYSGSLAWTNSFTRLTKHYPGRVVFLGVNLAIALILMEANM 240 Query 241 FDFLNTILGCYANCGMAWVVAVASDIGFNKYLLGLSPKTPEFRRGMLYAINPVGFGSLLL 300 FDFLNTILGCYANCGMAWVVAVASDIGFNKYLLGLSPKTPEFRRGMLYAINPVGFGSLLL Sbjct 241 FDFLNTILGCYANCGMAWVVAVASDIGFNKYLLGLSPKTPEFRRGMLYAINPVGFGSLLL 300 Query 301 AAGLSIVTFFGGLGAALQPYSPLVAIVTALVMPPILAAATKGKYYLRRTHDGIDLPMYDE 360 AAGLSIVTFFGGLGAALQPYSPLVAIVTALVMPPILAAATKGKYYLRRTHDGIDLPMYDE Sbjct 301 AAGLSIVTFFGGLGAALQPYSPLVAIVTALVMPPILAAATKGKYYLRRTHDGIDLPMYDE 360 Query 361 HGNPSAAVLTCHVCHQDFERPDMLACQTHGAHVCSLCLSTDKQAEHVLPGLARAHIPGDQ 420 HGNPSAAVLTCHVCHQDFERPDMLACQTHGAHVCSLCLSTDKQAEHVLPGLARAHIPGDQ Sbjct 361 HGNPSAAVLTCHVCHQDFERPDMLACQTHGAHVCSLCLSTDKQAEHVLPGLARAHIPGDQ 420 Query 421 VP 422 VP Sbjct 421 VP 422 >gi|289752178|ref|ZP_06511556.1| conserved membrane protein [Mycobacterium tuberculosis T92] gi|289692765|gb|EFD60194.1| conserved membrane protein [Mycobacterium tuberculosis T92] Length=561 Score = 860 bits (2221), Expect = 0.0, Method: Compositional matrix adjust. Identities = 421/422 (99%), Positives = 421/422 (99%), Gaps = 0/422 (0%) Query 1 MAQGLKLGLHIPLWAGYACSTLIIFPLVVYGMKVLSQLQLWTTPLWLILMAAPFGYLVVS 60 MAQGLKLGLHIPLWAGYACSTLIIFPLVVYGMKVLSQLQLWTTPLWLILMAAPFGYLVVS Sbjct 140 MAQGLKLGLHIPLWAGYACSTLIIFPLVVYGMKVLSQLQLWTTPLWLILMAAPFGYLVVS 199 Query 61 HPDSIGQFFSYAGKDGHGGLSFGSVLLAAGVCLSLIAQIAEQIDYLRFMPPRTPENANRW 120 HPDSIGQFFSYAGKDGHGGLSFGSVLLAAGVCLSLIAQIAEQIDYLRFMPPRTPENANRW Sbjct 200 HPDSIGQFFSYAGKDGHGGLSFGSVLLAAGVCLSLIAQIAEQIDYLRFMPPRTPENANRW 259 Query 121 WTWTLLAGPGWVAFGATKQIIGLFLAVYLMANIPGSSTIANQPVHQFMQIYRTFVPGWLA 180 WTWTLLAGPGWVAFGATKQIIGLFLAVYLMANIPGSSTIANQPVHQFMQIYRTFVPGWLA Sbjct 260 WTWTLLAGPGWVAFGATKQIIGLFLAVYLMANIPGSSTIANQPVHQFMQIYRTFVPGWLA 319 Query 181 LTLAVILVVLSQIKINVTNAYSGSLAWTNSFTRLTKHYPGRVVFLGVNLAIALILMEANM 240 LTLAVILVVLSQIKINVTNAYSGSLAWTNSFTRLTKHYPGRVVFLGVNLAIALILMEANM Sbjct 320 LTLAVILVVLSQIKINVTNAYSGSLAWTNSFTRLTKHYPGRVVFLGVNLAIALILMEANM 379 Query 241 FDFLNTILGCYANCGMAWVVAVASDIGFNKYLLGLSPKTPEFRRGMLYAINPVGFGSLLL 300 FDFLNTILGCYANCGMAWVVAVASDIGFNKYLLGLSPKTPEFRRGMLYAINPVGFGSLLL Sbjct 380 FDFLNTILGCYANCGMAWVVAVASDIGFNKYLLGLSPKTPEFRRGMLYAINPVGFGSLLL 439 Query 301 AAGLSIVTFFGGLGAALQPYSPLVAIVTALVMPPILAAATKGKYYLRRTHDGIDLPMYDE 360 AAGLSIVTFFGGLGAALQPYSPLVAIVTALVMPPILAAATKGKYYLRRTHDGIDLPMYDE Sbjct 440 AAGLSIVTFFGGLGAALQPYSPLVAIVTALVMPPILAAATKGKYYLRRTHDGIDLPMYDE 499 Query 361 HGNPSAAVLTCHVCHQDFERPDMLACQTHGAHVCSLCLSTDKQAEHVLPGLARAHIPGDQ 420 HGNPSAAVLTCHVCHQDFERPDMLA QTHGAHVCSLCLSTDKQAEHVLPGLARAHIPGDQ Sbjct 500 HGNPSAAVLTCHVCHQDFERPDMLAYQTHGAHVCSLCLSTDKQAEHVLPGLARAHIPGDQ 559 Query 421 VP 422 VP Sbjct 560 VP 561 >gi|289449158|ref|ZP_06438902.1| permease [Mycobacterium tuberculosis CPHL_A] gi|289422116|gb|EFD19317.1| permease [Mycobacterium tuberculosis CPHL_A] Length=561 Score = 859 bits (2220), Expect = 0.0, Method: Compositional matrix adjust. Identities = 421/422 (99%), Positives = 421/422 (99%), Gaps = 0/422 (0%) Query 1 MAQGLKLGLHIPLWAGYACSTLIIFPLVVYGMKVLSQLQLWTTPLWLILMAAPFGYLVVS 60 MAQGLKLGLHIPLWAGYACSTLIIFPLVVYGMKVLSQLQLWTTPLWLILMAAPFGYLVVS Sbjct 140 MAQGLKLGLHIPLWAGYACSTLIIFPLVVYGMKVLSQLQLWTTPLWLILMAAPFGYLVVS 199 Query 61 HPDSIGQFFSYAGKDGHGGLSFGSVLLAAGVCLSLIAQIAEQIDYLRFMPPRTPENANRW 120 HPDSIGQFFSYAGKDGHGGLSFGSVLLAAGVCLSLIAQIAEQIDYLRFMPPRTPENANRW Sbjct 200 HPDSIGQFFSYAGKDGHGGLSFGSVLLAAGVCLSLIAQIAEQIDYLRFMPPRTPENANRW 259 Query 121 WTWTLLAGPGWVAFGATKQIIGLFLAVYLMANIPGSSTIANQPVHQFMQIYRTFVPGWLA 180 WTWTLLAGPGWVAFGATKQIIGLFLAVYLMANIPGSSTIANQPVHQFMQIYRTFVPGWLA Sbjct 260 WTWTLLAGPGWVAFGATKQIIGLFLAVYLMANIPGSSTIANQPVHQFMQIYRTFVPGWLA 319 Query 181 LTLAVILVVLSQIKINVTNAYSGSLAWTNSFTRLTKHYPGRVVFLGVNLAIALILMEANM 240 LTLAVILVVLSQIKINVTNAYSGSLAWTNSFTRLTKHYPGRVVFLGVNLAIALILMEANM Sbjct 320 LTLAVILVVLSQIKINVTNAYSGSLAWTNSFTRLTKHYPGRVVFLGVNLAIALILMEANM 379 Query 241 FDFLNTILGCYANCGMAWVVAVASDIGFNKYLLGLSPKTPEFRRGMLYAINPVGFGSLLL 300 FDFLNTILGCYANCGMAWVVAVASDIGFNK LLGLSPKTPEFRRGMLYAINPVGFGSLLL Sbjct 380 FDFLNTILGCYANCGMAWVVAVASDIGFNKCLLGLSPKTPEFRRGMLYAINPVGFGSLLL 439 Query 301 AAGLSIVTFFGGLGAALQPYSPLVAIVTALVMPPILAAATKGKYYLRRTHDGIDLPMYDE 360 AAGLSIVTFFGGLGAALQPYSPLVAIVTALVMPPILAAATKGKYYLRRTHDGIDLPMYDE Sbjct 440 AAGLSIVTFFGGLGAALQPYSPLVAIVTALVMPPILAAATKGKYYLRRTHDGIDLPMYDE 499 Query 361 HGNPSAAVLTCHVCHQDFERPDMLACQTHGAHVCSLCLSTDKQAEHVLPGLARAHIPGDQ 420 HGNPSAAVLTCHVCHQDFERPDMLACQTHGAHVCSLCLSTDKQAEHVLPGLARAHIPGDQ Sbjct 500 HGNPSAAVLTCHVCHQDFERPDMLACQTHGAHVCSLCLSTDKQAEHVLPGLARAHIPGDQ 559 Query 421 VP 422 VP Sbjct 560 VP 561 >gi|340628425|ref|YP_004746877.1| putative integral membrane protein [Mycobacterium canettii CIPT 140010059] gi|340006615|emb|CCC45802.1| putative conserved integral membrane protein [Mycobacterium canettii CIPT 140010059] Length=422 Score = 856 bits (2211), Expect = 0.0, Method: Compositional matrix adjust. Identities = 420/422 (99%), Positives = 420/422 (99%), Gaps = 0/422 (0%) Query 1 MAQGLKLGLHIPLWAGYACSTLIIFPLVVYGMKVLSQLQLWTTPLWLILMAAPFGYLVVS 60 MAQGLKLGLHIPLWAGYACSTLIIFPLVVYGMKVLSQLQLWTTPLWLILMAAPFGYLVVS Sbjct 1 MAQGLKLGLHIPLWAGYACSTLIIFPLVVYGMKVLSQLQLWTTPLWLILMAAPFGYLVVS 60 Query 61 HPDSIGQFFSYAGKDGHGGLSFGSVLLAAGVCLSLIAQIAEQIDYLRFMPPRTPENANRW 120 HPDSIGQFFSYAGKDG GGLSFGSVLLAAGVCLSLIAQIAEQIDYLRFMPPRTPENANRW Sbjct 61 HPDSIGQFFSYAGKDGRGGLSFGSVLLAAGVCLSLIAQIAEQIDYLRFMPPRTPENANRW 120 Query 121 WTWTLLAGPGWVAFGATKQIIGLFLAVYLMANIPGSSTIANQPVHQFMQIYRTFVPGWLA 180 WTWTLLAGPGWVAFGATKQIIGLFLAVYLMANIPGSS IANQPVHQFMQIYRTFVPGWLA Sbjct 121 WTWTLLAGPGWVAFGATKQIIGLFLAVYLMANIPGSSAIANQPVHQFMQIYRTFVPGWLA 180 Query 181 LTLAVILVVLSQIKINVTNAYSGSLAWTNSFTRLTKHYPGRVVFLGVNLAIALILMEANM 240 LTLAVILVVLSQIKINVTNAYSGSLAWTNSFTRLTKHYPGRVVFLGVNLAIALILMEANM Sbjct 181 LTLAVILVVLSQIKINVTNAYSGSLAWTNSFTRLTKHYPGRVVFLGVNLAIALILMEANM 240 Query 241 FDFLNTILGCYANCGMAWVVAVASDIGFNKYLLGLSPKTPEFRRGMLYAINPVGFGSLLL 300 FDFLNTILGCYANCGMAWVVAVASDIGFNKYLLGLSPKTPEFRRGMLYAINPVGFGSLLL Sbjct 241 FDFLNTILGCYANCGMAWVVAVASDIGFNKYLLGLSPKTPEFRRGMLYAINPVGFGSLLL 300 Query 301 AAGLSIVTFFGGLGAALQPYSPLVAIVTALVMPPILAAATKGKYYLRRTHDGIDLPMYDE 360 AAGLSIVTFFGGLGAALQPYSPLVAIVTALVMPPILAAATKGKYYLRRTHDGIDLPMYDE Sbjct 301 AAGLSIVTFFGGLGAALQPYSPLVAIVTALVMPPILAAATKGKYYLRRTHDGIDLPMYDE 360 Query 361 HGNPSAAVLTCHVCHQDFERPDMLACQTHGAHVCSLCLSTDKQAEHVLPGLARAHIPGDQ 420 HGNPSAAVLTCHVCHQDFERPDMLACQTHGAHVCSLCLSTDKQAEHVLPGLARAHIPGDQ Sbjct 361 HGNPSAAVLTCHVCHQDFERPDMLACQTHGAHVCSLCLSTDKQAEHVLPGLARAHIPGDQ 420 Query 421 VP 422 VP Sbjct 421 VP 422 >gi|167967304|ref|ZP_02549581.1| putative transmembrane protein [Mycobacterium tuberculosis H37Ra] Length=431 Score = 837 bits (2163), Expect = 0.0, Method: Compositional matrix adjust. Identities = 410/410 (100%), Positives = 410/410 (100%), Gaps = 0/410 (0%) Query 1 MAQGLKLGLHIPLWAGYACSTLIIFPLVVYGMKVLSQLQLWTTPLWLILMAAPFGYLVVS 60 MAQGLKLGLHIPLWAGYACSTLIIFPLVVYGMKVLSQLQLWTTPLWLILMAAPFGYLVVS Sbjct 22 MAQGLKLGLHIPLWAGYACSTLIIFPLVVYGMKVLSQLQLWTTPLWLILMAAPFGYLVVS 81 Query 61 HPDSIGQFFSYAGKDGHGGLSFGSVLLAAGVCLSLIAQIAEQIDYLRFMPPRTPENANRW 120 HPDSIGQFFSYAGKDGHGGLSFGSVLLAAGVCLSLIAQIAEQIDYLRFMPPRTPENANRW Sbjct 82 HPDSIGQFFSYAGKDGHGGLSFGSVLLAAGVCLSLIAQIAEQIDYLRFMPPRTPENANRW 141 Query 121 WTWTLLAGPGWVAFGATKQIIGLFLAVYLMANIPGSSTIANQPVHQFMQIYRTFVPGWLA 180 WTWTLLAGPGWVAFGATKQIIGLFLAVYLMANIPGSSTIANQPVHQFMQIYRTFVPGWLA Sbjct 142 WTWTLLAGPGWVAFGATKQIIGLFLAVYLMANIPGSSTIANQPVHQFMQIYRTFVPGWLA 201 Query 181 LTLAVILVVLSQIKINVTNAYSGSLAWTNSFTRLTKHYPGRVVFLGVNLAIALILMEANM 240 LTLAVILVVLSQIKINVTNAYSGSLAWTNSFTRLTKHYPGRVVFLGVNLAIALILMEANM Sbjct 202 LTLAVILVVLSQIKINVTNAYSGSLAWTNSFTRLTKHYPGRVVFLGVNLAIALILMEANM 261 Query 241 FDFLNTILGCYANCGMAWVVAVASDIGFNKYLLGLSPKTPEFRRGMLYAINPVGFGSLLL 300 FDFLNTILGCYANCGMAWVVAVASDIGFNKYLLGLSPKTPEFRRGMLYAINPVGFGSLLL Sbjct 262 FDFLNTILGCYANCGMAWVVAVASDIGFNKYLLGLSPKTPEFRRGMLYAINPVGFGSLLL 321 Query 301 AAGLSIVTFFGGLGAALQPYSPLVAIVTALVMPPILAAATKGKYYLRRTHDGIDLPMYDE 360 AAGLSIVTFFGGLGAALQPYSPLVAIVTALVMPPILAAATKGKYYLRRTHDGIDLPMYDE Sbjct 322 AAGLSIVTFFGGLGAALQPYSPLVAIVTALVMPPILAAATKGKYYLRRTHDGIDLPMYDE 381 Query 361 HGNPSAAVLTCHVCHQDFERPDMLACQTHGAHVCSLCLSTDKQAEHVLPG 410 HGNPSAAVLTCHVCHQDFERPDMLACQTHGAHVCSLCLSTDKQAEHVLPG Sbjct 382 HGNPSAAVLTCHVCHQDFERPDMLACQTHGAHVCSLCLSTDKQAEHVLPG 431 >gi|183981116|ref|YP_001849407.1| hypothetical protein MMAR_1096 [Mycobacterium marinum M] gi|183174442|gb|ACC39552.1| conserved hypothetical membrane protein [Mycobacterium marinum M] Length=552 Score = 728 bits (1880), Expect = 0.0, Method: Compositional matrix adjust. Identities = 347/408 (86%), Positives = 372/408 (92%), Gaps = 0/408 (0%) Query 1 MAQGLKLGLHIPLWAGYACSTLIIFPLVVYGMKVLSQLQLWTTPLWLILMAAPFGYLVVS 60 MAQGL LGLHIPLW GYA STL+IFPLV+YGMKVLSQLQLWTTPLWLILM APFGYL++S Sbjct 141 MAQGLNLGLHIPLWLGYAFSTLLIFPLVIYGMKVLSQLQLWTTPLWLILMVAPFGYLLIS 200 Query 61 HPDSIGQFFSYAGKDGHGGLSFGSVLLAAGVCLSLIAQIAEQIDYLRFMPPRTPENANRW 120 HP+S+ QFF+YAGKDG S GS L+AAGVCL+LIAQIAEQIDYLRFMPPRTP+N+ RW Sbjct 201 HPESVAQFFAYAGKDGRATASIGSALMAAGVCLALIAQIAEQIDYLRFMPPRTPKNSRRW 260 Query 121 WTWTLLAGPGWVAFGATKQIIGLFLAVYLMANIPGSSTIANQPVHQFMQIYRTFVPGWLA 180 W W LLAGPGWV FGA KQIIGLFLAVYL++N+ G++ ANQPVHQFMQIYR F+PGWLA Sbjct 261 WAWMLLAGPGWVIFGAAKQIIGLFLAVYLLSNVAGAADFANQPVHQFMQIYRNFMPGWLA 320 Query 181 LTLAVILVVLSQIKINVTNAYSGSLAWTNSFTRLTKHYPGRVVFLGVNLAIALILMEANM 240 LTLAVILVVLSQ+KINVTNAYSGSLAWTNSFTR+TKHYPGRV+FLGVNL IALILMEANM Sbjct 321 LTLAVILVVLSQVKINVTNAYSGSLAWTNSFTRVTKHYPGRVMFLGVNLTIALILMEANM 380 Query 241 FDFLNTILGCYANCGMAWVVAVASDIGFNKYLLGLSPKTPEFRRGMLYAINPVGFGSLLL 300 FDFLNTILG YANCGMAWVV VASDI FNK+LLGLSPKTPEFRRGMLYAINPVGFGS+LL Sbjct 381 FDFLNTILGFYANCGMAWVVTVASDIVFNKFLLGLSPKTPEFRRGMLYAINPVGFGSMLL 440 Query 301 AAGLSIVTFFGGLGAALQPYSPLVAIVTALVMPPILAAATKGKYYLRRTHDGIDLPMYDE 360 AAGLSIV FFGGLG L+PYSPLVAI ALVMPPILA ATKGKYYLRRTHDGI+LPMYDE Sbjct 441 AAGLSIVAFFGGLGETLRPYSPLVAISVALVMPPILAIATKGKYYLRRTHDGIELPMYDE 500 Query 361 HGNPSAAVLTCHVCHQDFERPDMLACQTHGAHVCSLCLSTDKQAEHVL 408 HGNPSA L CHVC Q+FERPDM ACQTH AHVCSLCLSTDKQAEHVL Sbjct 501 HGNPSAEHLNCHVCRQNFERPDMAACQTHDAHVCSLCLSTDKQAEHVL 548 >gi|296165080|ref|ZP_06847633.1| sensor histidine kinase/response regulator [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295899573|gb|EFG79026.1| sensor histidine kinase/response regulator [Mycobacterium parascrofulaceum ATCC BAA-614] Length=553 Score = 715 bits (1845), Expect = 0.0, Method: Compositional matrix adjust. Identities = 341/409 (84%), Positives = 367/409 (90%), Gaps = 0/409 (0%) Query 1 MAQGLKLGLHIPLWAGYACSTLIIFPLVVYGMKVLSQLQLWTTPLWLILMAAPFGYLVVS 60 MAQGLKLGLH+PLWAGYACSTLIIFPLV+YGMKVLSQLQLWTTPLWL+LM PF YLVV Sbjct 142 MAQGLKLGLHVPLWAGYACSTLIIFPLVIYGMKVLSQLQLWTTPLWLVLMVVPFVYLVVR 201 Query 61 HPDSIGQFFSYAGKDGHGGLSFGSVLLAAGVCLSLIAQIAEQIDYLRFMPPRTPENANRW 120 HPDS+ QFF Y G+ G G + GS LLAAGVCLSLIAQIAEQIDYLRFMPPRTP N W Sbjct 202 HPDSVHQFFGYRGRGGDGTVDIGSSLLAAGVCLSLIAQIAEQIDYLRFMPPRTPANRRSW 261 Query 121 WTWTLLAGPGWVAFGATKQIIGLFLAVYLMANIPGSSTIANQPVHQFMQIYRTFVPGWLA 180 WTW LLAGPGWV FGA KQIIGLFLAVYL++ + GS+ +ANQPVHQF+ IYR F+PGWLA Sbjct 262 WTWVLLAGPGWVVFGAIKQIIGLFLAVYLISRVAGSTPVANQPVHQFLLIYRNFMPGWLA 321 Query 181 LTLAVILVVLSQIKINVTNAYSGSLAWTNSFTRLTKHYPGRVVFLGVNLAIALILMEANM 240 L LAVILVVLSQIKINVTNAYSGSLAWTNSFTR+TKHYPGRVVFL VNL IAL++MEA+M Sbjct 322 LALAVILVVLSQIKINVTNAYSGSLAWTNSFTRVTKHYPGRVVFLAVNLVIALVMMEADM 381 Query 241 FDFLNTILGCYANCGMAWVVAVASDIGFNKYLLGLSPKTPEFRRGMLYAINPVGFGSLLL 300 FD LNTILG YANCGMAWVVAVASDI NKYLL LSPKTPEFRRGMLYA+NPVGFGS+LL Sbjct 382 FDVLNTILGFYANCGMAWVVAVASDIVVNKYLLKLSPKTPEFRRGMLYAVNPVGFGSMLL 441 Query 301 AAGLSIVTFFGGLGAALQPYSPLVAIVTALVMPPILAAATKGKYYLRRTHDGIDLPMYDE 360 AAGLSIV FFGGLG AL+PYSPLVAI+ ALVMPPILA ATKGKYYLRRTHDGIDLPMYDE Sbjct 442 AAGLSIVAFFGGLGPALRPYSPLVAIIVALVMPPILAIATKGKYYLRRTHDGIDLPMYDE 501 Query 361 HGNPSAAVLTCHVCHQDFERPDMLACQTHGAHVCSLCLSTDKQAEHVLP 409 HGNPSAA L CHVCH D+ERPD++AC+THGAHVCSLCLSTDK A+HV P Sbjct 502 HGNPSAAQLNCHVCHHDYERPDVVACETHGAHVCSLCLSTDKLADHVPP 550 >gi|240167788|ref|ZP_04746447.1| hypothetical protein MkanA1_00630 [Mycobacterium kansasii ATCC 12478] Length=552 Score = 702 bits (1811), Expect = 0.0, Method: Compositional matrix adjust. Identities = 349/408 (86%), Positives = 373/408 (92%), Gaps = 0/408 (0%) Query 1 MAQGLKLGLHIPLWAGYACSTLIIFPLVVYGMKVLSQLQLWTTPLWLILMAAPFGYLVVS 60 MAQGL LGLH+PLW GYA STL+IFPLV+YGMKVLSQLQLWTTPLWL+LM APFGYLVVS Sbjct 140 MAQGLNLGLHVPLWLGYAISTLMIFPLVMYGMKVLSQLQLWTTPLWLLLMVAPFGYLVVS 199 Query 61 HPDSIGQFFSYAGKDGHGGLSFGSVLLAAGVCLSLIAQIAEQIDYLRFMPPRTPENANRW 120 HP+SIG+FFSYAGKDG GGL+ GS LLAAGVCLSLIAQIAEQIDYLRFMPPRTPEN+ RW Sbjct 200 HPESIGEFFSYAGKDGGGGLTVGSALLAAGVCLSLIAQIAEQIDYLRFMPPRTPENSRRW 259 Query 121 WTWTLLAGPGWVAFGATKQIIGLFLAVYLMANIPGSSTIANQPVHQFMQIYRTFVPGWLA 180 WTWTLLAGPGWV FGA KQIIGLFLAVYL+++I G++ IAN PVHQFMQIYR +PGWLA Sbjct 260 WTWTLLAGPGWVVFGALKQIIGLFLAVYLISHIAGATAIANLPVHQFMQIYRNVMPGWLA 319 Query 181 LTLAVILVVLSQIKINVTNAYSGSLAWTNSFTRLTKHYPGRVVFLGVNLAIALILMEANM 240 L LAVILVVLSQ+KINVTNAYSGSLAWTNSFTR+TKHYPGR+VFL VNLAIALILMEANM Sbjct 320 LALAVILVVLSQVKINVTNAYSGSLAWTNSFTRVTKHYPGRIVFLAVNLAIALILMEANM 379 Query 241 FDFLNTILGCYANCGMAWVVAVASDIGFNKYLLGLSPKTPEFRRGMLYAINPVGFGSLLL 300 FDFLNTILG YANCGMAWVV VASDI NKYLL LSPKTPEFRRGMLYAINPVGFGSLLL Sbjct 380 FDFLNTILGFYANCGMAWVVTVASDIVVNKYLLRLSPKTPEFRRGMLYAINPVGFGSLLL 439 Query 301 AAGLSIVTFFGGLGAALQPYSPLVAIVTALVMPPILAAATKGKYYLRRTHDGIDLPMYDE 360 AAGLSIV FFGGLG L+PYSPLVAIV A+VMPP+LA AT+G+YYLRR HDGIDLPMYDE Sbjct 440 AAGLSIVAFFGGLGETLRPYSPLVAIVIAVVMPPVLAIATRGRYYLRRGHDGIDLPMYDE 499 Query 361 HGNPSAAVLTCHVCHQDFERPDMLACQTHGAHVCSLCLSTDKQAEHVL 408 HGNPSA L CHVC DFERPDMLAC TH AHVCSLC+STDK+AEHVL Sbjct 500 HGNPSAEQLNCHVCRHDFERPDMLACHTHTAHVCSLCVSTDKRAEHVL 547 >gi|111223595|ref|YP_714389.1| hypothetical protein FRAAL4195 [Frankia alni ACN14a] gi|111151127|emb|CAJ62837.1| Conserved hypothetical transmembrane protein [Frankia alni ACN14a] Length=570 Score = 654 bits (1688), Expect = 0.0, Method: Compositional matrix adjust. Identities = 313/409 (77%), Positives = 356/409 (88%), Gaps = 0/409 (0%) Query 1 MAQGLKLGLHIPLWAGYACSTLIIFPLVVYGMKVLSQLQLWTTPLWLILMAAPFGYLVVS 60 MAQGLKLGLHIPLW GYA ST+IIFPLVVYGMK+LS LQLWTTPLWL+LM PF YL++S Sbjct 152 MAQGLKLGLHIPLWLGYATSTIIIFPLVVYGMKLLSTLQLWTTPLWLVLMVLPFAYLLIS 211 Query 61 HPDSIGQFFSYAGKDGHGGLSFGSVLLAAGVCLSLIAQIAEQIDYLRFMPPRTPENANRW 120 HPDSI FF Y G+DG GG + GSV LAAGVCLSLIAQIAEQ DYLRFMPPRTPEN+ RW Sbjct 212 HPDSISGFFDYGGQDGKGGFNLGSVFLAAGVCLSLIAQIAEQTDYLRFMPPRTPENSRRW 271 Query 121 WTWTLLAGPGWVAFGATKQIIGLFLAVYLMANIPGSSTIANQPVHQFMQIYRTFVPGWLA 180 WT +LAGPGWV FGA KQIIG+FLAVY++AN+ + +ANQPVHQF++IY+ +P W A Sbjct 272 WTAMVLAGPGWVVFGAIKQIIGMFLAVYIIANVADGAGVANQPVHQFLEIYQDILPHWAA 331 Query 181 LTLAVILVVLSQIKINVTNAYSGSLAWTNSFTRLTKHYPGRVVFLGVNLAIALILMEANM 240 L LAV LVV+SQ+KINVTNAYSGSLAWTNSFTR+TK YPGR+VFLG NLA+ALILMEA+M Sbjct 332 LALAVALVVISQVKINVTNAYSGSLAWTNSFTRITKTYPGRLVFLGFNLAVALILMEADM 391 Query 241 FDFLNTILGCYANCGMAWVVAVASDIGFNKYLLGLSPKTPEFRRGMLYAINPVGFGSLLL 300 F FLNTIL YANCGMAW+V VASDI FNKYLL LSP PEFRRGMLYA+NPVGFGS++L Sbjct 392 FSFLNTILAFYANCGMAWIVVVASDITFNKYLLKLSPLQPEFRRGMLYAVNPVGFGSMVL 451 Query 301 AAGLSIVTFFGGLGAALQPYSPLVAIVTALVMPPILAAATKGKYYLRRTHDGIDLPMYDE 360 +AG+SI+ F+GGLG+ L+PYSPLVAIV ALV+PPILA ATKG+YYLRRT DGIDLPMYDE Sbjct 452 SAGISIIDFYGGLGSGLKPYSPLVAIVLALVLPPILAVATKGRYYLRRTDDGIDLPMYDE 511 Query 361 HGNPSAAVLTCHVCHQDFERPDMLACQTHGAHVCSLCLSTDKQAEHVLP 409 HGNPS L+CHVCHQ++ERPDML CQTH A++CSL LSTDK +HVLP Sbjct 512 HGNPSGETLSCHVCHQEYERPDMLRCQTHDAYICSLDLSTDKVGDHVLP 560 >gi|331699217|ref|YP_004335456.1| hypothetical protein Psed_5470 [Pseudonocardia dioxanivorans CB1190] gi|326953906|gb|AEA27603.1| hypothetical protein Psed_5470 [Pseudonocardia dioxanivorans CB1190] Length=557 Score = 650 bits (1677), Expect = 0.0, Method: Compositional matrix adjust. Identities = 301/393 (77%), Positives = 348/393 (89%), Gaps = 0/393 (0%) Query 17 YACSTLIIFPLVVYGMKVLSQLQLWTTPLWLILMAAPFGYLVVSHPDSIGQFFSYAGKDG 76 YA STLIIFPLVVYGM +LS+LQLWTTPLWL+LM APF YL+VSHPDS+ FF+Y G+DG Sbjct 156 YALSTLIIFPLVVYGMSLLSKLQLWTTPLWLVLMVAPFVYLLVSHPDSVATFFAYQGEDG 215 Query 77 HGGLSFGSVLLAAGVCLSLIAQIAEQIDYLRFMPPRTPENANRWWTWTLLAGPGWVAFGA 136 +G S G+V+LAAGVCLSLIAQIAEQIDYLRFMPPRTPEN RWWT +LAGPGWV FGA Sbjct 216 NGAPSLGAVMLAAGVCLSLIAQIAEQIDYLRFMPPRTPENRRRWWTAMVLAGPGWVLFGA 275 Query 137 TKQIIGLFLAVYLMANIPGSSTIANQPVHQFMQIYRTFVPGWLALTLAVILVVLSQIKIN 196 KQ++GLFLAVY++AN+ G + +ANQPVHQF++IYR +P W A+TLAV+LVV+SQIKIN Sbjct 276 VKQVVGLFLAVYIIANVTGGAAVANQPVHQFLEIYRDIMPPWAAMTLAVVLVVISQIKIN 335 Query 197 VTNAYSGSLAWTNSFTRLTKHYPGRVVFLGVNLAIALILMEANMFDFLNTILGCYANCGM 256 VTNAYSGSLAWTNSFTR+T+ YPGR+VFLGVNLAIAL+LMEANMFDFLNTILG YANCGM Sbjct 336 VTNAYSGSLAWTNSFTRVTRRYPGRLVFLGVNLAIALVLMEANMFDFLNTILGFYANCGM 395 Query 257 AWVVAVASDIGFNKYLLGLSPKTPEFRRGMLYAINPVGFGSLLLAAGLSIVTFFGGLGAA 316 +WVV VASDI NKYLL LSPK PEFRRGMLYA+NPVGFGS++++AG+SIV FFGGLGAA Sbjct 396 SWVVVVASDIAINKYLLKLSPKEPEFRRGMLYAVNPVGFGSMIVSAGVSIVAFFGGLGAA 455 Query 317 LQPYSPLVAIVTALVMPPILAAATKGKYYLRRTHDGIDLPMYDEHGNPSAAVLTCHVCHQ 376 +QP+SPLVAI ALV+PP++A AT+G+YYLRRT DGI+LPMYDEHGNPS L CHVC Q Sbjct 456 VQPFSPLVAIGLALVLPPVIAVATRGRYYLRRTDDGIELPMYDEHGNPSGETLHCHVCRQ 515 Query 377 DFERPDMLACQTHGAHVCSLCLSTDKQAEHVLP 409 DFERPD+ AC TH A+VCSLCLSTD+ +HVLP Sbjct 516 DFERPDVAACHTHDAYVCSLCLSTDRVGDHVLP 548 >gi|336119093|ref|YP_004573867.1| hypothetical protein MLP_34500 [Microlunatus phosphovorus NM-1] gi|334686879|dbj|BAK36464.1| hypothetical protein MLP_34500 [Microlunatus phosphovorus NM-1] Length=584 Score = 634 bits (1635), Expect = 9e-180, Method: Compositional matrix adjust. Identities = 306/410 (75%), Positives = 352/410 (86%), Gaps = 0/410 (0%) Query 1 MAQGLKLGLHIPLWAGYACSTLIIFPLVVYGMKVLSQLQLWTTPLWLILMAAPFGYLVVS 60 MAQGL LGL +PLWAGYA ST+IIFPLV+YGMKVLS+LQLWTTPLWL+LM PF YL++S Sbjct 174 MAQGLYLGLGVPLWAGYAVSTIIIFPLVIYGMKVLSKLQLWTTPLWLVLMVLPFAYLLIS 233 Query 61 HPDSIGQFFSYAGKDGHGGLSFGSVLLAAGVCLSLIAQIAEQIDYLRFMPPRTPENANRW 120 HP SI FF+Y G+ G+G S GSV+LAAGVCLSLIAQIAEQIDYLRFMPPRT EN RW Sbjct 234 HPASIETFFAYEGEKGNGATSLGSVMLAAGVCLSLIAQIAEQIDYLRFMPPRTAENKRRW 293 Query 121 WTWTLLAGPGWVAFGATKQIIGLFLAVYLMANIPGSSTIANQPVHQFMQIYRTFVPGWLA 180 WT +LAGPGWV FGA KQ+IGLFLAVY++AN+ +T+AN+PVHQF++IYR F+P +A Sbjct 294 WTAMVLAGPGWVIFGAIKQVIGLFLAVYIIANVADGATVANEPVHQFLEIYRDFLPAPVA 353 Query 181 LTLAVILVVLSQIKINVTNAYSGSLAWTNSFTRLTKHYPGRVVFLGVNLAIALILMEANM 240 L LAV+LVV+SQ+KINVTNAYSGSLAWTNS+TR+TK YPGRVVFL NL +ALILMEANM Sbjct 354 LGLAVVLVVISQVKINVTNAYSGSLAWTNSYTRITKRYPGRVVFLAFNLLLALILMEANM 413 Query 241 FDFLNTILGCYANCGMAWVVAVASDIGFNKYLLGLSPKTPEFRRGMLYAINPVGFGSLLL 300 FDFLNTILG YANCGM+W+V VA+DI NKY+L LSPK PEFRRGMLYAINPVGF S+L+ Sbjct 414 FDFLNTILGFYANCGMSWIVVVATDIAINKYVLKLSPKKPEFRRGMLYAINPVGFVSMLV 473 Query 301 AAGLSIVTFFGGLGAALQPYSPLVAIVTALVMPPILAAATKGKYYLRRTHDGIDLPMYDE 360 +AG+SI FFG LGA +QPYSPLVAI A V+PPI+A AT+G+YYLRRT DGIDLPMYD Sbjct 474 SAGVSIAVFFGLLGATIQPYSPLVAIGLAFVLPPIIAVATQGRYYLRRTDDGIDLPMYDA 533 Query 361 HGNPSAAVLTCHVCHQDFERPDMLACQTHGAHVCSLCLSTDKQAEHVLPG 410 GNPS A+LTCHVC Q+FERPDM+AC TH VCSLCLSTDK A+HVLP Sbjct 534 DGNPSDAILTCHVCRQEFERPDMVACATHDDVVCSLCLSTDKVADHVLPA 583 >gi|169629720|ref|YP_001703369.1| hypothetical protein MAB_2635c [Mycobacterium abscessus ATCC 19977] gi|169241687|emb|CAM62715.1| Conserved hypothetical protein (sensor protein?) [Mycobacterium abscessus] Length=564 Score = 620 bits (1600), Expect = 1e-175, Method: Compositional matrix adjust. Identities = 298/414 (72%), Positives = 347/414 (84%), Gaps = 6/414 (1%) Query 1 MAQGLKLGLHIPLWAGYACSTLIIFPLVVYGMKVLSQLQLWTTPLWLILMAAPFGYLVVS 60 MAQGLKLGL +PL GYA ST+II PLV+YGMK LS LQ+WTTPLWL++M PF YL+V Sbjct 146 MAQGLKLGLGVPLPVGYAMSTIIIIPLVIYGMKALSVLQVWTTPLWLVMMVIPFVYLLVR 205 Query 61 HPDSIGQFFSYAGKDGHGGLSFGSVLLAAGVCLSLIAQIAEQIDYLRFMPPRTPENANRW 120 HPDSIG FF+Y GKDG G ++ GS++LAAGVCLSLIAQIAEQIDYLRFMPP+TPEN+ RW Sbjct 206 HPDSIGAFFAYGGKDGQG-VNLGSIMLAAGVCLSLIAQIAEQIDYLRFMPPKTPENSRRW 264 Query 121 WTWTLLAGPGWVAFGATKQIIGLFLAVYLMANIPGSSTIANQPVHQFMQIYRTFVPGWLA 180 WT LLAGPGWV FGA KQ+IGLFLAVYL+AN+ G +T+ANQPVHQF++IY+ +P WLA Sbjct 265 WTAMLLAGPGWVLFGAIKQVIGLFLAVYLIANVAGGATVANQPVHQFLEIYQNMMPHWLA 324 Query 181 LTLAVILVVLSQIKINVTNAYSGSLAWTNSFTRLTKHYPGRVVFLGVNLAIALILMEANM 240 +TLAVILVV+SQIKINVTNAYSGSLAWTNSFTR+TKHYPGR++F+ NL IAL+LMEANM Sbjct 325 ITLAVILVVISQIKINVTNAYSGSLAWTNSFTRITKHYPGRLIFVLFNLLIALVLMEANM 384 Query 241 FDFLNTILGCYANCGMAWVVAVASDIGFNKYLLGLSPKTPEFRRGMLYAINPVGFGSLLL 300 FDFLNTILG YANCGMAWVV VASDI NKYLL LSPK PEFRRGMLY +NPVGF S+LL Sbjct 385 FDFLNTILGFYANCGMAWVVTVASDIAINKYLLKLSPKEPEFRRGMLYDVNPVGFVSMLL 444 Query 301 AAGLSIVTFFGGLGAALQPYSPLVAIVTALVMPPILAAATKGKYYLRRTHDGIDLPMYDE 360 +AG+SI+ FFG GA ++PYSP+VA+V A V+PPILA T+G+YYLRR+ DGIDLPMYDE Sbjct 445 SAGISILVFFGVFGATIRPYSPIVAVVIAFVLPPILALVTRGRYYLRRSDDGIDLPMYDE 504 Query 361 HGNPSAAVLTCHVCHQDFERPDMLACQTHG-----AHVCSLCLSTDKQAEHVLP 409 +GNPS +L C V +FERPDMLA G +V SL L+TD+ EHVLP Sbjct 505 YGNPSGELLHCAVSGIEFERPDMLASAKPGPNGEVQYVSSLSLATDRIGEHVLP 558 >gi|226303979|ref|YP_002763937.1| hypothetical protein RER_04900 [Rhodococcus erythropolis PR4] gi|226183094|dbj|BAH31198.1| conserved hypothetical membrane protein [Rhodococcus erythropolis PR4] Length=561 Score = 616 bits (1589), Expect = 2e-174, Method: Compositional matrix adjust. Identities = 296/416 (72%), Positives = 346/416 (84%), Gaps = 7/416 (1%) Query 1 MAQGLKLGLHIPLWAGYACSTLIIFPLVVYGMKVLSQLQLWTTPLWLILMAAPFGYLVVS 60 MAQGLKLGL IPL GYA STL++ PLV+YGMK L++LQ+WTTPLWL++M PF YL+ Sbjct 142 MAQGLKLGLGIPLSIGYAVSTLMVIPLVIYGMKALAKLQVWTTPLWLVMMVLPFLYLLFK 201 Query 61 HPDSIGQFFSYAGKDGHGG--LSFGSVLLAAGVCLSLIAQIAEQIDYLRFMPPRTPENAN 118 HPDS+ FF++ G+DG G ++FGSV+LAAGVCLSLIAQIAEQIDYLRFMPP+TPEN Sbjct 202 HPDSVSAFFAFGGEDGANGKGVNFGSVMLAAGVCLSLIAQIAEQIDYLRFMPPKTPENTR 261 Query 119 RWWTWTLLAGPGWVAFGATKQIIGLFLAVYLMANIPGSSTIANQPVHQFMQIYRTFVPGW 178 RWW +LAGPGWV FGA KQI+GLFLAVY++AN+ S+IANQPVHQF++IY+ +P W Sbjct 262 RWWAAVILAGPGWVIFGAFKQIVGLFLAVYIIANVVDGSSIANQPVHQFLEIYQDMMPHW 321 Query 179 LALTLAVILVVLSQIKINVTNAYSGSLAWTNSFTRLTKHYPGRVVFLGVNLAIALILMEA 238 LA+TLAVILVV+SQIKINVTNAYSGSLAWTNS+TR+TK YPGR++F+ VNLAIALILMEA Sbjct 322 LAMTLAVILVVISQIKINVTNAYSGSLAWTNSYTRVTKTYPGRMIFVLVNLAIALILMEA 381 Query 239 NMFDFLNTILGCYANCGMAWVVAVASDIGFNKYLLGLSPKTPEFRRGMLYAINPVGFGSL 298 NMFDFLNTILG YANCG+AWVV VASDI NKY L LSPK PEFRRGMLY +NPVGF S+ Sbjct 382 NMFDFLNTILGFYANCGIAWVVVVASDIAINKYWLKLSPKVPEFRRGMLYDVNPVGFVSM 441 Query 299 LLAAGLSIVTFFGGLGAALQPYSPLVAIVTALVMPPILAAATKGKYYLRRTHDGIDLPMY 358 LLAAG+SI+ FFG G+A++P+SP+VAIV ALVMPP+LA ATKGKYYLRRT DGIDLPM+ Sbjct 442 LLAAGISILVFFGAFGSAIKPFSPIVAIVIALVMPPVLAVATKGKYYLRRTDDGIDLPMF 501 Query 359 DEHGNPSAAVLTCHVCHQDFERPDMLACQTHG-----AHVCSLCLSTDKQAEHVLP 409 DE+GNPS L C V +FERPDMLA G ++ SL LSTDK EHVLP Sbjct 502 DEYGNPSGETLLCCVSGIEFERPDMLASNVPGPNGEKQYISSLALSTDKTGEHVLP 557 >gi|324999150|ref|ZP_08120262.1| hypothetical protein PseP1_10316 [Pseudonocardia sp. P1] Length=562 Score = 616 bits (1588), Expect = 3e-174, Method: Compositional matrix adjust. Identities = 306/409 (75%), Positives = 348/409 (86%), Gaps = 0/409 (0%) Query 1 MAQGLKLGLHIPLWAGYACSTLIIFPLVVYGMKVLSQLQLWTTPLWLILMAAPFGYLVVS 60 MAQGL+LGL +PLW GYA ST+IIFPLVVYGM +LS LQLWTTPLWL+LM PFGYLV++ Sbjct 151 MAQGLELGLGVPLWIGYAVSTVIIFPLVVYGMSLLSTLQLWTTPLWLVLMVLPFGYLVLA 210 Query 61 HPDSIGQFFSYAGKDGHGGLSFGSVLLAAGVCLSLIAQIAEQIDYLRFMPPRTPENANRW 120 HPDS+ F +Y G+DG G S GSV+LAAGVCLSLIAQIAEQIDYLRFMPP+TPEN RW Sbjct 211 HPDSVSTFLAYQGEDGLGAPSIGSVMLAAGVCLSLIAQIAEQIDYLRFMPPKTPENRRRW 270 Query 121 WTWTLLAGPGWVAFGATKQIIGLFLAVYLMANIPGSSTIANQPVHQFMQIYRTFVPGWLA 180 WT TLLAGPGWV FGA KQ++GLFLAVY +AN+ G + +AN+PV QF+ IY+ VPGWLA Sbjct 271 WTATLLAGPGWVLFGAAKQVVGLFLAVYFIANVAGGAAVANEPVQQFLLIYQDLVPGWLA 330 Query 181 LTLAVILVVLSQIKINVTNAYSGSLAWTNSFTRLTKHYPGRVVFLGVNLAIALILMEANM 240 +TLAV+LVV+SQ+KINVTNAYSGSLAWTNSFTR+T YPGR+VFLGVNL IAL+LMEANM Sbjct 331 ITLAVVLVVVSQVKINVTNAYSGSLAWTNSFTRITGTYPGRLVFLGVNLLIALVLMEANM 390 Query 241 FDFLNTILGCYANCGMAWVVAVASDIGFNKYLLGLSPKTPEFRRGMLYAINPVGFGSLLL 300 FDFLN ILG YAN +AW+V VA+DI NKYLL LSPK PEFRRGMLYA+NPVGF S++L Sbjct 391 FDFLNAILGFYANIAIAWIVVVATDIAVNKYLLRLSPKHPEFRRGMLYAVNPVGFVSVVL 450 Query 301 AAGLSIVTFFGGLGAALQPYSPLVAIVTALVMPPILAAATKGKYYLRRTHDGIDLPMYDE 360 A GLSI TFFG LG A+QP+SPLVAI LV+PP+LA AT G+YYLRRT DGIDLPMYDE Sbjct 451 AGGLSIATFFGALGTAIQPFSPLVAIALGLVLPPVLAVATGGRYYLRRTDDGIDLPMYDE 510 Query 361 HGNPSAAVLTCHVCHQDFERPDMLACQTHGAHVCSLCLSTDKQAEHVLP 409 HGNPS VL CHVC QD ERPDM AC H A+VCSLCLSTD++ EHVLP Sbjct 511 HGNPSDVVLPCHVCGQDLERPDMTACVAHDAYVCSLCLSTDRRKEHVLP 559 >gi|229494812|ref|ZP_04388568.1| sensor histidine kinase/response regulator [Rhodococcus erythropolis SK121] gi|229318308|gb|EEN84173.1| sensor histidine kinase/response regulator [Rhodococcus erythropolis SK121] Length=561 Score = 615 bits (1586), Expect = 5e-174, Method: Compositional matrix adjust. Identities = 296/416 (72%), Positives = 345/416 (83%), Gaps = 7/416 (1%) Query 1 MAQGLKLGLHIPLWAGYACSTLIIFPLVVYGMKVLSQLQLWTTPLWLILMAAPFGYLVVS 60 MAQGLKLGL IPL GYA STL++ PLV+YGMK L++LQ+WTTPLWL++M PF YL+ Sbjct 142 MAQGLKLGLGIPLSIGYAVSTLMVIPLVIYGMKALAKLQVWTTPLWLVMMVLPFLYLLFK 201 Query 61 HPDSIGQFFSYAGKDGHGG--LSFGSVLLAAGVCLSLIAQIAEQIDYLRFMPPRTPENAN 118 HPDS+ FF++ G+DG G ++FGSV+LAAGVCLSLIAQIAEQIDYLRFMPP+TPEN Sbjct 202 HPDSVSAFFAFGGEDGANGKGVNFGSVMLAAGVCLSLIAQIAEQIDYLRFMPPKTPENTR 261 Query 119 RWWTWTLLAGPGWVAFGATKQIIGLFLAVYLMANIPGSSTIANQPVHQFMQIYRTFVPGW 178 RWW +LAGPGWV FGA KQI+GLFLAVY++AN+ S+IANQPVHQF++IY+ +P W Sbjct 262 RWWAAVILAGPGWVIFGAFKQIVGLFLAVYIIANVVDGSSIANQPVHQFLEIYQDMMPHW 321 Query 179 LALTLAVILVVLSQIKINVTNAYSGSLAWTNSFTRLTKHYPGRVVFLGVNLAIALILMEA 238 LA+TLAVILVV+SQIKINVTNAYSGSLAWTNS+TR+TK YPGR+VF+ VNLAIALILMEA Sbjct 322 LAMTLAVILVVISQIKINVTNAYSGSLAWTNSYTRVTKTYPGRMVFVLVNLAIALILMEA 381 Query 239 NMFDFLNTILGCYANCGMAWVVAVASDIGFNKYLLGLSPKTPEFRRGMLYAINPVGFGSL 298 NMFDFLNTILG YANCG+AWVV VASDI NKY L LSPK PEFRRGMLY +NPVGF S+ Sbjct 382 NMFDFLNTILGFYANCGIAWVVVVASDIAINKYWLKLSPKVPEFRRGMLYDVNPVGFVSM 441 Query 299 LLAAGLSIVTFFGGLGAALQPYSPLVAIVTALVMPPILAAATKGKYYLRRTHDGIDLPMY 358 LLAAG+SI+ FFG G+ ++P+SP+VAIV ALVMPP+LA ATKGKYYLRRT DGIDLPM+ Sbjct 442 LLAAGVSILVFFGAFGSTIKPFSPIVAIVIALVMPPVLAVATKGKYYLRRTDDGIDLPMF 501 Query 359 DEHGNPSAAVLTCHVCHQDFERPDMLACQTHG-----AHVCSLCLSTDKQAEHVLP 409 DE+GNPS L C V +FERPDMLA G ++ SL LSTDK EHVLP Sbjct 502 DEYGNPSGETLLCCVSGIEFERPDMLASNVPGPNGEKQYISSLALSTDKTGEHVLP 557 >gi|258650858|ref|YP_003200014.1| cytosine/purines, uracil, thiamine, allantoin permease family protein [Nakamurella multipartita DSM 44233] gi|258554083|gb|ACV77025.1| permease for cytosine/purines, uracil, thiamine, allantoin family protein [Nakamurella multipartita DSM 44233] Length=568 Score = 596 bits (1536), Expect = 3e-168, Method: Compositional matrix adjust. Identities = 281/413 (69%), Positives = 335/413 (82%), Gaps = 1/413 (0%) Query 1 MAQGLKLGLHIPLWAGYACSTLIIFPLVVYGMKVLSQLQLWTTPLWLILMAAPFGYLVVS 60 MAQGL+LGL IPLW GYA STL++ PLV+YGMK L++LQ+WTTPLWL+L P YL+VS Sbjct 156 MAQGLQLGLGIPLWLGYAVSTLMVIPLVIYGMKALAKLQVWTTPLWLVLFVIPMVYLLVS 215 Query 61 HPDSIGQFFSYAGKDGHGGLSFGSVLLAAGVCLSLIAQIAEQIDYLRFMPPRTPENANRW 120 HPDS+ FF Y G DG+G SF +++LAAGVCLSL+AQIAEQIDYLRFMPPRT N W Sbjct 216 HPDSVETFFQYQGADGNGAPSFAAMMLAAGVCLSLMAQIAEQIDYLRFMPPRTEANKRSW 275 Query 121 WTWTLLAGPGWVAFGATKQIIGLFLAVYLMANI-PGSSTIANQPVHQFMQIYRTFVPGWL 179 W +LAGPGWV FGA KQ++GLF+AVY++A + P ++ AN+PVHQF+ +Y F+PGW Sbjct 276 WRAVILAGPGWVIFGAIKQVVGLFVAVYIIAKLTPDAAATANEPVHQFLTVYEQFLPGWA 335 Query 180 ALTLAVILVVLSQIKINVTNAYSGSLAWTNSFTRLTKHYPGRVVFLGVNLAIALILMEAN 239 A+TLAVILVV+SQIKINVTNAYSGSLAWTNSFTR+TK YPGR+VF+ NLA+AL+LME N Sbjct 336 AMTLAVILVVISQIKINVTNAYSGSLAWTNSFTRVTKRYPGRLVFVLFNLAVALLLMELN 395 Query 240 MFDFLNTILGCYANCGMAWVVAVASDIGFNKYLLGLSPKTPEFRRGMLYAINPVGFGSLL 299 MF LNTILG YANC MAWVV VA+DI NK LL +SP PEFRRGMLYA NPVGF S++ Sbjct 396 MFSVLNTILGFYANCAMAWVVTVAADIVINKGLLKISPTVPEFRRGMLYAFNPVGFVSVI 455 Query 300 LAAGLSIVTFFGGLGAALQPYSPLVAIVTALVMPPILAAATKGKYYLRRTHDGIDLPMYD 359 L+AGLSI FFG G A+QP+SP+VAIV ALV+ P++A TKGKYYLRRT DGID+PM+D Sbjct 456 LSAGLSIAVFFGLFGEAIQPFSPIVAIVLALVLTPLIAVITKGKYYLRRTDDGIDVPMFD 515 Query 360 EHGNPSAAVLTCHVCHQDFERPDMLACQTHGAHVCSLCLSTDKQAEHVLPGLA 412 GNPS LTCHVC D+ERPDM+ C+TH A++CSL LSTDK +HVLP A Sbjct 516 ADGNPSGEHLTCHVCRVDYERPDMVKCETHDAYICSLDLSTDKVGDHVLPAQA 568 >gi|119963649|ref|YP_946880.1| hypothetical protein AAur_1092 [Arthrobacter aurescens TC1] gi|119950508|gb|ABM09419.1| putative membrane protein [Arthrobacter aurescens TC1] Length=575 Score = 587 bits (1513), Expect = 1e-165, Method: Compositional matrix adjust. Identities = 279/415 (68%), Positives = 332/415 (80%), Gaps = 6/415 (1%) Query 1 MAQGLKLGLHIPLWAGYACSTLIIFPLVVYGMKVLSQLQLWTTPLWLILMAAPFGYLVVS 60 MAQGL+LGL IP W GYA ST+II PLV+YGMK L+ LQ+WTTPLWL+LM P GYL++S Sbjct 158 MAQGLQLGLGIPQWIGYAVSTIIIIPLVIYGMKTLATLQVWTTPLWLLLMVVPVGYLLLS 217 Query 61 HPDSIGQFFSYAGKDGHGGLSFGSVLLAAGVCLSLIAQIAEQIDYLRFMPPRTPENANRW 120 HP+SI FF++ G G GG + SV+LAAGVCLSL+AQIAEQIDYLRFMPP+T EN W Sbjct 218 HPESIDAFFAFTGASGEGGPNLASVMLAAGVCLSLMAQIAEQIDYLRFMPPKTAENKGAW 277 Query 121 WTWTLLAGPGWVAFGATKQIIGLFLAVYLMANI-PGSSTIANQPVHQFMQIYRTFVPGWL 179 W +LAGPGWV FGA KQIIGLF+A+YL+A + P +++ AN+PVHQF+ +Y +P WL Sbjct 278 WRAVILAGPGWVIFGAIKQIIGLFIAIYLIAKLDPAAASSANEPVHQFLGVYEEMMPAWL 337 Query 180 ALTLAVILVVLSQIKINVTNAYSGSLAWTNSFTRLTKHYPGRVVFLGVNLAIALILMEAN 239 A+TLAV+LVV+SQIKINVTNAYSGSLAWTNSFTR+TK YPGR+VF+ VNL IALILME+N Sbjct 338 AMTLAVVLVVISQIKINVTNAYSGSLAWTNSFTRITKTYPGRMVFVVVNLVIALILMESN 397 Query 240 MFDFLNTILGCYANCGMAWVVAVASDIGFNKYLLGLSPKTPEFRRGMLYAINPVGFGSLL 299 MF+FLNTILG YANC MAWVV VASDI NKYLL +SPK PEFRRGMLYA+NPVGF S+L Sbjct 398 MFEFLNTILGFYANCAMAWVVTVASDIAINKYLLKISPKVPEFRRGMLYAVNPVGFVSML 457 Query 300 LAAGLSIVTFFGGLGAALQPYSPLVAIVTALVMPPILAAATKGKYYLRRTHDGIDLPMYD 359 ++AG+SI FFG GAA+QP+SP+ A+ ALV+PP+LA T+G+YYLRRT DGIDLPM+D Sbjct 458 VSAGVSIAVFFGAFGAAVQPFSPIFAVGLALVLPPVLALVTRGRYYLRRTDDGIDLPMFD 517 Query 360 EHGNPSAAVLTCHVCHQDFERPDMLACQTHG-----AHVCSLCLSTDKQAEHVLP 409 GNPS L CHV +FERPDML G ++ SL LSTDK E VLP Sbjct 518 ADGNPSDQKLLCHVTGLEFERPDMLRSAQDGPDGEPQYISSLALSTDKSGELVLP 572 >gi|220911760|ref|YP_002487069.1| cytosine/purines uracil thiamine allantoin permease [Arthrobacter chlorophenolicus A6] gi|219858638|gb|ACL38980.1| permease for cytosine/purines uracil thiamine allantoin [Arthrobacter chlorophenolicus A6] Length=575 Score = 585 bits (1509), Expect = 4e-165, Method: Compositional matrix adjust. Identities = 280/415 (68%), Positives = 331/415 (80%), Gaps = 6/415 (1%) Query 1 MAQGLKLGLHIPLWAGYACSTLIIFPLVVYGMKVLSQLQLWTTPLWLILMAAPFGYLVVS 60 MAQGL+LGL IP W GYA ST+II PLV+YGM L++LQ+WTTPLWL+LM P GYL++S Sbjct 158 MAQGLELGLGIPQWLGYAASTVIIIPLVIYGMNTLAKLQVWTTPLWLLLMVVPVGYLLIS 217 Query 61 HPDSIGQFFSYAGKDGHGGLSFGSVLLAAGVCLSLIAQIAEQIDYLRFMPPRTPENANRW 120 HP+SI FF+Y G+ G GG + SV+LAAGVCLSL+AQIAEQIDYLRFMPPRT N W Sbjct 218 HPESIESFFAYTGESGDGGPNLASVMLAAGVCLSLMAQIAEQIDYLRFMPPRTDANRAAW 277 Query 121 WTWTLLAGPGWVAFGATKQIIGLFLAVYLMANI-PGSSTIANQPVHQFMQIYRTFVPGWL 179 W +LAGPGWV FGA KQI+GLF+A+YL+A + P +S AN+PVHQF+ +Y+ +P WL Sbjct 278 WRAVILAGPGWVIFGAIKQIVGLFIAIYLIATLDPAASATANEPVHQFLGVYQEMMPAWL 337 Query 180 ALTLAVILVVLSQIKINVTNAYSGSLAWTNSFTRLTKHYPGRVVFLGVNLAIALILMEAN 239 A+TLAV+LVV+SQIKINVTNAYSGSLAWTNSFTR+TK YPGR+VF+ VNL IAL+LMEAN Sbjct 338 AMTLAVVLVVISQIKINVTNAYSGSLAWTNSFTRITKTYPGRMVFVVVNLLIALVLMEAN 397 Query 240 MFDFLNTILGCYANCGMAWVVAVASDIGFNKYLLGLSPKTPEFRRGMLYAINPVGFGSLL 299 MFDFLNTILG YANC MAWVV VASDI NKYLL +SPK PEFRRGMLYA+NPVGF S+L Sbjct 398 MFDFLNTILGFYANCAMAWVVTVASDIAINKYLLKISPKVPEFRRGMLYAVNPVGFVSML 457 Query 300 LAAGLSIVTFFGGLGAALQPYSPLVAIVTALVMPPILAAATKGKYYLRRTHDGIDLPMYD 359 ++AG+SI FFG G+ +QPYSP+ A+ ALV+PP LA T+G+YYLRRT DGIDLPM+D Sbjct 458 VSAGVSIAVFFGAFGSGIQPYSPIFAVGLALVLPPALAVLTRGRYYLRRTDDGIDLPMFD 517 Query 360 EHGNPSAAVLTCHVCHQDFERPDMLACQTHG-----AHVCSLCLSTDKQAEHVLP 409 GNPS A LTCHV +FERPDM+ +V SL LSTDK E VLP Sbjct 518 ADGNPSDAKLTCHVTGLEFERPDMVRSAQDAPDGGPQYVSSLALSTDKTGELVLP 572 >gi|309812909|ref|ZP_07706637.1| permease, cytosine/purine, uracil, thiamine, allantoin family [Dermacoccus sp. Ellin185] gi|308432981|gb|EFP56885.1| permease, cytosine/purine, uracil, thiamine, allantoin family [Dermacoccus sp. Ellin185] Length=552 Score = 585 bits (1508), Expect = 5e-165, Method: Compositional matrix adjust. Identities = 282/409 (69%), Positives = 337/409 (83%), Gaps = 1/409 (0%) Query 1 MAQGLKLGLHIPLWAGYACSTLIIFPLVVYGMKVLSQLQLWTTPLWLILMAAPFGYLVVS 60 MAQGLKLGL +PLWAGY S+L++ PLVVYGMK LS+LQ+WTTPLWL+LM P YLV + Sbjct 143 MAQGLKLGLGVPLWAGYLVSSLMVIPLVVYGMKALSKLQVWTTPLWLLLMGVPLVYLVQA 202 Query 61 HPDSIGQFFSYAGKDGHGGLSFGSVLLAAGVCLSLIAQIAEQIDYLRFMPPRTPENANRW 120 HP S+ F Y G G GG+SF +V+LAAGVCLSLIAQIAEQIDYLRFMP +TPEN+ RW Sbjct 203 HPGSVDTFLDYKGAHG-GGVSFSAVMLAAGVCLSLIAQIAEQIDYLRFMPAKTPENSRRW 261 Query 121 WTWTLLAGPGWVAFGATKQIIGLFLAVYLMANIPGSSTIANQPVHQFMQIYRTFVPGWLA 180 WT ++AGPGWV FGA KQ+IGLFLAVYL+AN+ G ++IAN+PVHQF+ Y +P WLA Sbjct 262 WTAVIVAGPGWVFFGALKQMIGLFLAVYLIANVAGGASIANEPVHQFLSAYEQMMPHWLA 321 Query 181 LTLAVILVVLSQIKINVTNAYSGSLAWTNSFTRLTKHYPGRVVFLGVNLAIALILMEANM 240 +TLAV+LVV+SQIKINVTNAYSGSLAWTNSFTR+TKHYPGR+VF+ N+ IAL++MEANM Sbjct 322 MTLAVVLVVISQIKINVTNAYSGSLAWTNSFTRVTKHYPGRMVFVLFNVTIALVMMEANM 381 Query 241 FDFLNTILGCYANCGMAWVVAVASDIGFNKYLLGLSPKTPEFRRGMLYAINPVGFGSLLL 300 FDFLN ILG YAN +AW+V VASDI N YLL LSPKTPEFRRGMLYAINPVGF S+++ Sbjct 382 FDFLNDILGFYANLAIAWIVTVASDIIVNTYLLKLSPKTPEFRRGMLYAINPVGFVSVIV 441 Query 301 AAGLSIVTFFGGLGAALQPYSPLVAIVTALVMPPILAAATKGKYYLRRTHDGIDLPMYDE 360 A GLSIV FFGGLG+ LQPYSP++A+V ++V+PP++A ATKG+YYLRR DG+ M+DE Sbjct 442 AGGLSIVAFFGGLGSGLQPYSPIIAVVLSVVLPPVIAVATKGRYYLRRDTDGLAHEMFDE 501 Query 361 HGNPSAAVLTCHVCHQDFERPDMLACQTHGAHVCSLCLSTDKQAEHVLP 409 HGNPSAA + C C FERPDMLA T VCSLC++TD+ +HVLP Sbjct 502 HGNPSAAEIDCEACGDVFERPDMLASATGDGAVCSLCVATDRDGKHVLP 550 >gi|325962322|ref|YP_004240228.1| purine-cytosine permease-like transporter [Arthrobacter phenanthrenivorans Sphe3] gi|323468409|gb|ADX72094.1| purine-cytosine permease-like transporter [Arthrobacter phenanthrenivorans Sphe3] Length=575 Score = 572 bits (1474), Expect = 4e-161, Method: Compositional matrix adjust. Identities = 282/415 (68%), Positives = 333/415 (81%), Gaps = 6/415 (1%) Query 1 MAQGLKLGLHIPLWAGYACSTLIIFPLVVYGMKVLSQLQLWTTPLWLILMAAPFGYLVVS 60 MAQGL++GL IP W GYA ST+II PLV+YGM L++LQ+WTTPLWL+LM P GYL+VS Sbjct 158 MAQGLEVGLGIPQWLGYAASTVIIIPLVIYGMNTLAKLQVWTTPLWLLLMVVPVGYLLVS 217 Query 61 HPDSIGQFFSYAGKDGHGGLSFGSVLLAAGVCLSLIAQIAEQIDYLRFMPPRTPENANRW 120 HP+SI FF+Y G+ G GG + SV+LAAGVCLSL+AQIAEQIDYLRFMPPRT N W Sbjct 218 HPESINTFFAYTGQSGDGGPNLASVMLAAGVCLSLMAQIAEQIDYLRFMPPRTEANRGAW 277 Query 121 WTWTLLAGPGWVAFGATKQIIGLFLAVYLMANI-PGSSTIANQPVHQFMQIYRTFVPGWL 179 W +LAGPGWV FGA KQI+GLF+A+YL+A + P +S AN+PVHQF+ +YR +P WL Sbjct 278 WRAVILAGPGWVIFGAIKQIVGLFIAIYLIATLDPAASATANEPVHQFLGVYREMMPAWL 337 Query 180 ALTLAVILVVLSQIKINVTNAYSGSLAWTNSFTRLTKHYPGRVVFLGVNLAIALILMEAN 239 A+TLAV+LVV+SQIKINVTNAYSGSLAWTNSFTR+TK YPGR+VF+ VNLAIAL+LMEAN Sbjct 338 AMTLAVVLVVISQIKINVTNAYSGSLAWTNSFTRITKTYPGRMVFVVVNLAIALVLMEAN 397 Query 240 MFDFLNTILGCYANCGMAWVVAVASDIGFNKYLLGLSPKTPEFRRGMLYAINPVGFGSLL 299 MFDFLNTILG YANC MAWVV VASDI NKYLL +SPK PEFRRGMLYA+NPVGF S+L Sbjct 398 MFDFLNTILGFYANCAMAWVVTVASDIAINKYLLKISPKVPEFRRGMLYAVNPVGFVSML 457 Query 300 LAAGLSIVTFFGGLGAALQPYSPLVAIVTALVMPPILAAATKGKYYLRRTHDGIDLPMYD 359 +AG+SI FFG G+A+QP+SP+ A+ ALV+PP+LA AT+G+YYLRRT DGIDLPM+D Sbjct 458 ASAGISIAVFFGAFGSAIQPFSPIFAVGLALVLPPLLALATRGRYYLRRTDDGIDLPMFD 517 Query 360 EHGNPSAAVLTCHVCHQDFERPDMLACQTHG-----AHVCSLCLSTDKQAEHVLP 409 GNPS A L CHV +FERPDM+ +V SL LSTDK E VLP Sbjct 518 ADGNPSDAKLLCHVTGIEFERPDMVRSAKDAPDGGPQYVSSLALSTDKTGELVLP 572 >gi|326383210|ref|ZP_08204898.1| hypothetical protein SCNU_09749 [Gordonia neofelifaecis NRRL B-59395] gi|326197960|gb|EGD55146.1| hypothetical protein SCNU_09749 [Gordonia neofelifaecis NRRL B-59395] Length=563 Score = 565 bits (1456), Expect = 5e-159, Method: Compositional matrix adjust. Identities = 270/419 (65%), Positives = 329/419 (79%), Gaps = 10/419 (2%) Query 1 MAQGLKLGLHIPLWAGYACSTLIIFPLVVYGMKVLSQLQLWTTPLWLILMAAPFGYLVVS 60 MAQGL LGL IPL GY STLI+ PLV+YGMK L++LQ+WTTPLWL++M P YL+ + Sbjct 141 MAQGLNLGLSIPLPIGYLASTLIVLPLVIYGMKALAKLQVWTTPLWLVMMVGPLIYLLAA 200 Query 61 HPDSIGQFFSYAGKDGHG-----GLSFGSVLLAAGVCLSLIAQIAEQIDYLRFMPPRTPE 115 HP S+ +F +++G D +G G+S+ ++L AGVCLSLIAQIAEQIDYLRFMPP+TP+ Sbjct 201 HPGSVSEFLAFSGVDENGAPRGAGVSWAGIMLCAGVCLSLIAQIAEQIDYLRFMPPKTPD 260 Query 116 NANRWWTWTLLAGPGWVAFGATKQIIGLFLAVYLMANIPGSSTIANQPVHQFMQIYRTFV 175 N RWWT L+AGPGWV FGA KQI+GLFLAVYL+AN+ + IANQPVHQF+ +Y + Sbjct 261 NQRRWWTAVLIAGPGWVLFGAVKQIVGLFLAVYLIANVADGAGIANQPVHQFVAVYDEMM 320 Query 176 PGWLALTLAVILVVLSQIKINVTNAYSGSLAWTNSFTRLTKHYPGRVVFLGVNLAIALIL 235 P WLA+TLAV+LVV+SQIKINVTNAYSGSLAWTNSFTR+TK YPGR+VF+ VNLAIAL+L Sbjct 321 PAWLAMTLAVVLVVISQIKINVTNAYSGSLAWTNSFTRVTKTYPGRLVFVVVNLAIALVL 380 Query 236 MEANMFDFLNTILGCYANCGMAWVVAVASDIGFNKYLLGLSPKTPEFRRGMLYAINPVGF 295 MEANMF FL+ +L YANCG+AW+V VA+DI NKYLLG+SPK PEFRRGMLYA+NPVGF Sbjct 381 MEANMFSFLSELLNFYANCGIAWIVVVATDIVVNKYLLGISPKDPEFRRGMLYAVNPVGF 440 Query 296 GSLLLAAGLSIVTFFGGLGAALQPYSPLVAIVTALVMPPILAAATKGKYYLRRTHDGIDL 355 S+++AAG SI FFG G + P+SPLVA A+V+PP++A T+G+YYLRRT DGIDL Sbjct 441 VSVIVAAGASIAVFFGAFGDGIAPFSPLVAAGLAVVLPPVIAILTRGRYYLRRTDDGIDL 500 Query 356 PMYDEHGNPSAAVLTCHVCHQDFERPDMLAC-----QTHGAHVCSLCLSTDKQAEHVLP 409 PMYDEHGNPS A L C V +FERPDMLA ++ SL L+ DK H+LP Sbjct 501 PMYDEHGNPSDAKLWCCVTQTEFERPDMLASALPAPDGSKQYISSLALACDKTGAHILP 559 >gi|262201257|ref|YP_003272465.1| hypothetical protein Gbro_1280 [Gordonia bronchialis DSM 43247] gi|262084604|gb|ACY20572.1| conserved hypothetical protein [Gordonia bronchialis DSM 43247] Length=596 Score = 563 bits (1451), Expect = 2e-158, Method: Compositional matrix adjust. Identities = 283/417 (68%), Positives = 337/417 (81%), Gaps = 8/417 (1%) Query 1 MAQGLKLGLHIPLWAGYACSTLIIFPLVVYGMKVLSQLQLWTTPLWLILMAAPFGYLVVS 60 MAQGLKLGL+IPLW GY S+++I PLV+YGM L++LQ+WTTPLWLI+M APF YLV Sbjct 155 MAQGLKLGLNIPLWLGYLGSSVLIIPLVIYGMNTLAKLQVWTTPLWLIMMVAPFLYLVFR 214 Query 61 HPDSIGQFFSYAG-KDGHGG--LSFGSVLLAAGVCLSLIAQIAEQIDYLRFMPPRTPENA 117 HP +IG F S++G DG G +SF +LAAGVCLSLIAQIAEQIDYLRFMPP+TPEN+ Sbjct 215 HPGAIGDFLSFSGGTDGQAGHGVSFAGTMLAAGVCLSLIAQIAEQIDYLRFMPPKTPENS 274 Query 118 NRWWTWTLLAGPGWVAFGATKQIIGLFLAVYLMANIPGSSTIANQPVHQFMQIYRTFVPG 177 RWWT L AGPGWV FGA KQ++GLFLAVYL+ N S+ +AN+PVHQF+ +Y F+P Sbjct 275 RRWWTAVLTAGPGWVIFGAIKQVVGLFLAVYLIMNFAESAGVANEPVHQFLAVYEEFMPH 334 Query 178 WLALTLAVILVVLSQIKINVTNAYSGSLAWTNSFTRLTKHYPGRVVFLGVNLAIALILME 237 WLALTLAVILVV+SQ+KINVTNAYSGSLAWTNSFTR+TK YPGR+VFL N+AIA++LME Sbjct 335 WLALTLAVILVVISQVKINVTNAYSGSLAWTNSFTRVTKTYPGRLVFLVFNVAIAVVLME 394 Query 238 ANMFDFLNTILGCYANCGMAWVVAVASDIGFNKYLLGLSPKTPEFRRGMLYAINPVGFGS 297 A+MF FLN +L YANCG+AW+VAVASDI NKYLL +SPK PEFRRGMLY +NPVGFGS Sbjct 395 ADMFSFLNELLNFYANCGIAWIVAVASDIAINKYLLKISPKVPEFRRGMLYNVNPVGFGS 454 Query 298 LLLAAGLSIVTFFGGLGAALQPYSPLVAIVTALVMPPILAAATKGKYYLRRTHDGIDLPM 357 +++AAG SI+ +F G +QPYSPLVA+V ALV+PPI+A ATKGKYYLRRT DGID+PM Sbjct 455 VIVAAGASILVYFHVFGDEIQPYSPLVALVLALVLPPIIALATKGKYYLRRTDDGIDIPM 514 Query 358 YDEHGNPSAAVLTCHVCHQDFERPDMLACQTHG-----AHVCSLCLSTDKQAEHVLP 409 +DEHGNP+ A LTC V +FERPDM+A G ++ SL LS DK EHVLP Sbjct 515 FDEHGNPTDARLTCCVTGIEFERPDMIASAVPGPNGEKQYISSLALSCDKTGEHVLP 571 >gi|290955741|ref|YP_003486923.1| protein [Streptomyces scabiei 87.22] gi|260645267|emb|CBG68353.1| putative integral membrane protein [Streptomyces scabiei 87.22] Length=550 Score = 549 bits (1415), Expect = 3e-154, Method: Compositional matrix adjust. Identities = 263/412 (64%), Positives = 314/412 (77%), Gaps = 2/412 (0%) Query 1 MAQGLKLGLHIPLWAGYACSTLIIFPLVVYGMKVLSQLQLWTTPLWLILMAAPFGYLVVS 60 MAQGLKLGL +PLW GY STL++ PLVVYGMK LS+LQ+WTTP+WL+LM AP YLV + Sbjct 141 MAQGLKLGLGMPLWLGYLVSTLMVIPLVVYGMKALSKLQVWTTPIWLLLMVAPLVYLVSN 200 Query 61 HPDSIGQFFSYAGKDGHGGLSFGSVLLAAGVCLSLIAQIAEQIDYLRFMPPRTPENANRW 120 P ++ +F +YAG DG G +S SVLL AGVCLSLIAQI EQIDYLRFMPP+T N W Sbjct 201 DPGTVDRFLAYAGTDGDGAVSTASVLLGAGVCLSLIAQIGEQIDYLRFMPPKTEANKRSW 260 Query 121 WTWTLLAGPGWVAFGATKQIIGLFLAVYLMANIPGSSTIANQPVHQFMQIYRTFVPGWLA 180 WT ++AGPGWV GA KQ IG+FLAVY++A + +A +P+ QF + +P W Sbjct 261 WTAVVMAGPGWVVLGALKQAIGVFLAVYVLAEV--GPAVATEPIQQFKGAFDAMLPSWTV 318 Query 181 LTLAVILVVLSQIKINVTNAYSGSLAWTNSFTRLTKHYPGRVVFLGVNLAIALILMEANM 240 L LAV LVV+SQIKINVTNAYSGSLAWTNSFTR+T YPGR+VF+ VNL AL LMEA+M Sbjct 319 LPLAVALVVISQIKINVTNAYSGSLAWTNSFTRVTGRYPGRMVFVLVNLGFALALMEADM 378 Query 241 FDFLNTILGCYANCGMAWVVAVASDIGFNKYLLGLSPKTPEFRRGMLYAINPVGFGSLLL 300 F FLN+ILG Y+NC +AWVV VA+DIG NKYLL LSP PEFRRGMLYA+NPVG + ++ Sbjct 379 FSFLNSILGFYSNCAIAWVVTVATDIGVNKYLLKLSPHAPEFRRGMLYAVNPVGVVAFVV 438 Query 301 AAGLSIVTFFGGLGAALQPYSPLVAIVTALVMPPILAAATKGKYYLRRTHDGIDLPMYDE 360 A+GLSI +F LG LQPYSP+ A + A V+ P++A AT+GKYYLRRT DGI PM D Sbjct 439 ASGLSIALYFHALGDTLQPYSPVAAALIAFVLTPLMAIATRGKYYLRRTDDGIAEPMLDA 498 Query 361 HGNPSAAVLTCHVCHQDFERPDMLACQTHGAHVCSLCLSTDKQAEHVLPGLA 412 GNPS +L CHVC Q +ERPD+ AC+TH A VCSLCLSTDK +HVLP A Sbjct 499 DGNPSGVILDCHVCRQPYERPDLTACRTHDAVVCSLCLSTDKVGDHVLPATA 550 >gi|296141085|ref|YP_003648328.1| cytosine/purines uracil thiamine allantoin permease [Tsukamurella paurometabola DSM 20162] gi|296029219|gb|ADG79989.1| permease for cytosine/purines uracil thiamine allantoin [Tsukamurella paurometabola DSM 20162] Length=570 Score = 549 bits (1414), Expect = 4e-154, Method: Compositional matrix adjust. Identities = 282/429 (66%), Positives = 338/429 (79%), Gaps = 21/429 (4%) Query 1 MAQGLKLGLHIPLWAGYACSTLIIFPLVVYGMKVLSQLQLWTTPLWLILMAAPFGYLVVS 60 MAQGLKLGL +PLW GY S++I+ PLV+YGMK L++LQ+WTTPLWL++M PFGYL+ Sbjct 140 MAQGLKLGLGMPLWLGYLVSSVIVIPLVIYGMKSLAKLQVWTTPLWLVMMVLPFGYLLFQ 199 Query 61 HPDSIGQFFSYAGKD---------------GHGGLSFGSVLLAAGVCLSLIAQIAEQIDY 105 HPD+I FF+Y+G D GHG +SF +LAAGVCLSLIAQIAEQIDY Sbjct 200 HPDAIESFFAYSGTDIVRDASGTVISATPAGHG-VSFAGAMLAAGVCLSLIAQIAEQIDY 258 Query 106 LRFMPPRTPENANRWWTWTLLAGPGWVAFGATKQIIGLFLAVYLMANIPGSSTIANQPVH 165 LRFMPP+T EN+ +WW + AGPGWV FGA KQI+GLFLAVYL+A ++ IAN+PVH Sbjct 259 LRFMPPKTAENSRKWWIAVITAGPGWVFFGAIKQIVGLFLAVYLIAQTAENAGIANEPVH 318 Query 166 QFMQIYRTFVPGWLALTLAVILVVLSQIKINVTNAYSGSLAWTNSFTRLTKHYPGRVVFL 225 QF++IY+ F+PGWLA+TLAVILVV+SQIKINVTNAYSGSLAWTNSFTR+TK YPGR+VF+ Sbjct 319 QFLEIYKDFMPGWLAMTLAVILVVISQIKINVTNAYSGSLAWTNSFTRVTKTYPGRLVFV 378 Query 226 GVNLAIALILMEANMFDFLNTILGCYANCGMAWVVAVASDIGFNKYLLGLSPKTPEFRRG 285 N+AIAL LM A+MF FLN++L YANCG+AW+V VASDI NKYLL +SPK PEFRRG Sbjct 379 IFNVAIALGLMLADMFSFLNSLLAFYANCGIAWIVVVASDIAINKYLLKISPKVPEFRRG 438 Query 286 MLYAINPVGFGSLLLAAGLSIVTFFGGLGAALQPYSPLVAIVTALVMPPILAAATKGKYY 345 MLY +NPVGF S+++AAGLSI+ FFG LG+ LQPYSPLVA+V ALV+PP+LA AT+GKYY Sbjct 439 MLYNVNPVGFVSVIVAAGLSIMVFFGLLGSTLQPYSPLVALVLALVLPPVLALATQGKYY 498 Query 346 LRRTHDGIDLPMYDEHGNPSAAVLTCHVCHQDFERPDMLACQTHG-----AHVCSLCLST 400 LRRT DGIDLPM+D GNPS A L C V +FERPDM+A G ++ SL LS Sbjct 499 LRRTDDGIDLPMFDADGNPSDAKLLCCVTGIEFERPDMIASNVPGPNGEKQYISSLALSC 558 Query 401 DKQAEHVLP 409 DK EHVLP Sbjct 559 DKSGEHVLP 567 >gi|317508921|ref|ZP_07966558.1| hypothetical protein HMPREF9336_02930 [Segniliparus rugosus ATCC BAA-974] gi|316252805|gb|EFV12238.1| hypothetical protein HMPREF9336_02930 [Segniliparus rugosus ATCC BAA-974] Length=566 Score = 547 bits (1410), Expect = 1e-153, Method: Compositional matrix adjust. Identities = 284/421 (68%), Positives = 340/421 (81%), Gaps = 15/421 (3%) Query 1 MAQGLKLGLHIPLWAGYACSTLIIFPLVVYGMKVLSQLQLWTTPLWLILMAAPFGYLVVS 60 MAQGLKLGL IPLW GY S+L+I PLVVYGMKVLS LQ+WTTPLWL+LM APFGYL+ Sbjct 144 MAQGLKLGLSIPLWLGYLLSSLLIIPLVVYGMKVLSTLQVWTTPLWLVLMVAPFGYLLWR 203 Query 61 HPDSIGQFFSYAG--KDG---HGGLSFGSVLLAAGVCLSLIAQIAEQIDYLRFMPPRTPE 115 HP+S+ FF+Y G KDG H G+SF +LAAGVCLSLIAQIAEQ+DYLRFMPP+TPE Sbjct 204 HPESVSAFFAYGGTAKDGSPAHVGVSFAGSMLAAGVCLSLIAQIAEQVDYLRFMPPKTPE 263 Query 116 NANRWWTWTLLAGPGWVAFGATKQIIGLFLAVYLMANI--PGSSTIANQPVHQFMQIYRT 173 N+ +WW+ LLAGPGWV FGA KQI+GLFLAVYL+ + PG +ANQPVHQF+ IY+ Sbjct 264 NSRKWWSAVLLAGPGWVIFGAIKQIVGLFLAVYLIGSAVDPG---VANQPVHQFLAIYQN 320 Query 174 FVPGWLALTLAVILVVLSQIKINVTNAYSGSLAWTNSFTRLTKHYPGRVVFLGVNLAIAL 233 +P W A+TLAV+LVV+SQIKINVTNAYSGSLAWTNSFTR+TKHYPGR++F+ +N+ IAL Sbjct 321 MMPPWAAMTLAVVLVVISQIKINVTNAYSGSLAWTNSFTRVTKHYPGRLLFVVLNVGIAL 380 Query 234 ILMEANMFDFLNTILGCYANCGMAWVVAVASDIGFNKYLLGLSPKTPEFRRGMLYAINPV 293 +LMEANMFDFLN+IL YANCG+AW+V VASDI NKYLL +SPK PEFRRGMLY PV Sbjct 381 VLMEANMFDFLNSILSFYANCGIAWIVTVASDIAINKYLLKISPKVPEFRRGMLYDFCPV 440 Query 294 GFGSLLLAAGLSIVTFFGGLGAALQPYSPLVAIVTALVMPPILAAATKGKYYLRRTHDGI 353 GFGS+++AAG+SI+ +FG LG+A+QPYSPLVA ALV+PP++A AT G++YLRR DGI Sbjct 441 GFGSMVVAAGVSILAYFGALGSAIQPYSPLVAAALALVLPPVIALATGGRHYLRRKDDGI 500 Query 354 DLPMYDEHGNPSAAVLTCHVCHQDFERPDMLACQTHG-----AHVCSLCLSTDKQAEHVL 408 DLP++DEHGNPS +L CHV +FERPDM+A G ++ SL LS DK HVL Sbjct 501 DLPLFDEHGNPSGELLYCHVTEMEFERPDMIASALPGPDGEVRYISSLALSCDKVGHHVL 560 Query 409 P 409 P Sbjct 561 P 561 >gi|326775467|ref|ZP_08234732.1| hypothetical protein SACT1_1277 [Streptomyces cf. griseus XylebKG-1] gi|326655800|gb|EGE40646.1| hypothetical protein SACT1_1277 [Streptomyces griseus XylebKG-1] Length=561 Score = 538 bits (1385), Expect = 9e-151, Method: Compositional matrix adjust. Identities = 258/409 (64%), Positives = 313/409 (77%), Gaps = 2/409 (0%) Query 1 MAQGLKLGLHIPLWAGYACSTLIIFPLVVYGMKVLSQLQLWTTPLWLILMAAPFGYLVVS 60 MAQGLKLG +PLW GYA STL++ PLV+YGMK LS+LQ+WTTP+WL+LM P YLV + Sbjct 145 MAQGLKLGFGLPLWLGYAVSTLMVIPLVIYGMKALSKLQVWTTPIWLLLMVGPLVYLVAT 204 Query 61 HPDSIGQFFSYAGKDGHGGLSFGSVLLAAGVCLSLIAQIAEQIDYLRFMPPRTPENANRW 120 P ++ F +YAG DG G L+ SVLL AGVCLSLIAQI EQIDYLRFMPP+T N W Sbjct 205 DPGTVDSFLAYAGTDGEGSLNTASVLLGAGVCLSLIAQIGEQIDYLRFMPPKTEANRRGW 264 Query 121 WTWTLLAGPGWVAFGATKQIIGLFLAVYLMANIPGSSTIANQPVHQFMQIYRTFVPGWLA 180 WT ++AGPGWV GA KQ IG+FLAVY+++ + ++ A +P+ QF + +P WL Sbjct 265 WTAMVMAGPGWVVLGAIKQAIGVFLAVYVLSEVGPAA--ATEPIQQFRGAFDAMMPSWLV 322 Query 181 LTLAVILVVLSQIKINVTNAYSGSLAWTNSFTRLTKHYPGRVVFLGVNLAIALILMEANM 240 + LAV+LVV+SQIKINVTNAYSGSLAWTNSFTR+TKHYPGR++F+ VNLA ALILMEA+M Sbjct 323 VPLAVVLVVISQIKINVTNAYSGSLAWTNSFTRVTKHYPGRMIFVLVNLAFALILMEADM 382 Query 241 FDFLNTILGCYANCGMAWVVAVASDIGFNKYLLGLSPKTPEFRRGMLYAINPVGFGSLLL 300 F FLN+ILG Y+NC +AWVV VA+DIG NKYLL LSP PEFRRGMLYA+NPVG + Sbjct 383 FSFLNSILGFYSNCAIAWVVTVATDIGVNKYLLKLSPHAPEFRRGMLYAVNPVGVTAFTA 442 Query 301 AAGLSIVTFFGGLGAALQPYSPLVAIVTALVMPPILAAATKGKYYLRRTHDGIDLPMYDE 360 A+GLSI +F G LQPYSP+ A+V A V+ P++A T+G+YYLRR+ DGI +P+ D Sbjct 443 ASGLSIAMYFHAFGDTLQPYSPVAAVVIAFVLTPVMAVVTRGRYYLRRSDDGIPVPLLDA 502 Query 361 HGNPSAAVLTCHVCHQDFERPDMLACQTHGAHVCSLCLSTDKQAEHVLP 409 GNPSA CHVC Q FERPD+ AC H A VCSLCLSTDK +HVLP Sbjct 503 EGNPSAVTYDCHVCRQTFERPDLAACPAHDAMVCSLCLSTDKAGDHVLP 551 >gi|182434950|ref|YP_001822669.1| hypothetical protein SGR_1157 [Streptomyces griseus subsp. griseus NBRC 13350] gi|178463466|dbj|BAG17986.1| conserved hypothetical protein [Streptomyces griseus subsp. griseus NBRC 13350] Length=561 Score = 537 bits (1383), Expect = 2e-150, Method: Compositional matrix adjust. Identities = 258/409 (64%), Positives = 313/409 (77%), Gaps = 2/409 (0%) Query 1 MAQGLKLGLHIPLWAGYACSTLIIFPLVVYGMKVLSQLQLWTTPLWLILMAAPFGYLVVS 60 MAQGLKLG +PLW GYA STL++ PLV+YGMK LS+LQ+WTTP+WL+LM P YLV + Sbjct 145 MAQGLKLGFGLPLWLGYAVSTLMVIPLVIYGMKALSKLQVWTTPIWLLLMVGPLVYLVAT 204 Query 61 HPDSIGQFFSYAGKDGHGGLSFGSVLLAAGVCLSLIAQIAEQIDYLRFMPPRTPENANRW 120 P ++ F +YAG DG G L+ SVLL AGVCLSLIAQI EQIDYLRFMPP+T N W Sbjct 205 DPGTVDSFLAYAGTDGEGSLNTASVLLGAGVCLSLIAQIGEQIDYLRFMPPKTEANRRGW 264 Query 121 WTWTLLAGPGWVAFGATKQIIGLFLAVYLMANIPGSSTIANQPVHQFMQIYRTFVPGWLA 180 WT ++AGPGWV GA KQ IG+FLAVY+++ + ++ A +P+ QF + +P WL Sbjct 265 WTAMVMAGPGWVVLGAIKQAIGVFLAVYVLSEVGPAA--ATEPIQQFRGAFDAMMPSWLV 322 Query 181 LTLAVILVVLSQIKINVTNAYSGSLAWTNSFTRLTKHYPGRVVFLGVNLAIALILMEANM 240 + LAV+LVV+SQIKINVTNAYSGSLAWTNSFTR+TKHYPGR++F+ VNLA ALILMEA+M Sbjct 323 VPLAVVLVVISQIKINVTNAYSGSLAWTNSFTRVTKHYPGRMIFVLVNLAFALILMEADM 382 Query 241 FDFLNTILGCYANCGMAWVVAVASDIGFNKYLLGLSPKTPEFRRGMLYAINPVGFGSLLL 300 F FLN+ILG Y+NC +AWVV VA+DIG NKYLL LSP PEFRRGMLYA+NPVG + Sbjct 383 FSFLNSILGFYSNCAIAWVVTVATDIGVNKYLLKLSPHAPEFRRGMLYAVNPVGVTAFTA 442 Query 301 AAGLSIVTFFGGLGAALQPYSPLVAIVTALVMPPILAAATKGKYYLRRTHDGIDLPMYDE 360 A+GLSI +F G LQPYSP+ A+V A V+ P++A T+G+YYLRR+ DGI +P+ D Sbjct 443 ASGLSIAMYFHAFGDTLQPYSPVAAVVIAFVLTPVMAVVTRGRYYLRRSDDGIPVPLLDA 502 Query 361 HGNPSAAVLTCHVCHQDFERPDMLACQTHGAHVCSLCLSTDKQAEHVLP 409 GNPSA CHVC Q FERPD+ AC H A VCSLCLSTDK +HVLP Sbjct 503 EGNPSAVTYDCHVCRQTFERPDLAACPAHDAVVCSLCLSTDKAGDHVLP 551 >gi|333028915|ref|ZP_08456979.1| hypothetical protein STTU_6419 [Streptomyces sp. Tu6071] gi|332748767|gb|EGJ79208.1| hypothetical protein STTU_6419 [Streptomyces sp. Tu6071] Length=563 Score = 535 bits (1379), Expect = 4e-150, Method: Compositional matrix adjust. Identities = 259/409 (64%), Positives = 316/409 (78%), Gaps = 2/409 (0%) Query 1 MAQGLKLGLHIPLWAGYACSTLIIFPLVVYGMKVLSQLQLWTTPLWLILMAAPFGYLVVS 60 MAQGLKLGLH+PLW GY ST ++ PLVVYGMK LS+LQ+WTTP+WL+LM P Y+V Sbjct 156 MAQGLKLGLHLPLWIGYLVSTFMVIPLVVYGMKALSKLQVWTTPVWLLLMVGPLVYVVAE 215 Query 61 HPDSIGQFFSYAGKDGHGGLSFGSVLLAAGVCLSLIAQIAEQIDYLRFMPPRTPENANRW 120 P ++ +F +YAG G GG++ SVLL AGVCLSLIAQI EQIDYLRFMPPRT +N W Sbjct 216 DPGTVDRFLAYAGTSGDGGINTASVLLGAGVCLSLIAQIGEQIDYLRFMPPRTDKNRRAW 275 Query 121 WTWTLLAGPGWVAFGATKQIIGLFLAVYLMANIPGSSTIANQPVHQFMQIYRTFVPGWLA 180 WT ++AGPGWV GA KQ IG+FLAVY+++ + ++ A +P+ QF + +P WL Sbjct 276 WTAVVMAGPGWVVLGALKQAIGVFLAVYILSGVGPAA--ATEPIQQFRGAFDAMMPSWLV 333 Query 181 LTLAVILVVLSQIKINVTNAYSGSLAWTNSFTRLTKHYPGRVVFLGVNLAIALILMEANM 240 + LAV+LVV+SQIKINVTNAYSGSLAWTNSFTR+T+HYPGR+VF+ VNL AL LMEA+M Sbjct 334 VPLAVVLVVISQIKINVTNAYSGSLAWTNSFTRVTRHYPGRMVFVLVNLGFALALMEADM 393 Query 241 FDFLNTILGCYANCGMAWVVAVASDIGFNKYLLGLSPKTPEFRRGMLYAINPVGFGSLLL 300 F FLN IL Y+NC +AWVV VA+DI NKY+L LSP PEFRRGMLYA+NPVG S + Sbjct 394 FSFLNDILSFYSNCAIAWVVTVATDIMVNKYVLKLSPLQPEFRRGMLYAVNPVGVVSFVA 453 Query 301 AAGLSIVTFFGGLGAALQPYSPLVAIVTALVMPPILAAATKGKYYLRRTHDGIDLPMYDE 360 A+GLSI +F LG +QPYSP+ A+V A V+ P++A T+GKYYLRRT DGI P+ DE Sbjct 454 ASGLSIAMYFHALGDTVQPYSPVAAVVIAFVLTPVMALMTRGKYYLRRTDDGIAEPLLDE 513 Query 361 HGNPSAAVLTCHVCHQDFERPDMLACQTHGAHVCSLCLSTDKQAEHVLP 409 GNPSA+ TCHVC Q++ERPD+ AC TH AHVCSLCLSTD+ EHVLP Sbjct 514 SGNPSASPYTCHVCAQEYERPDVTACVTHEAHVCSLCLSTDRSGEHVLP 562 >gi|239991899|ref|ZP_04712563.1| hypothetical protein SrosN1_31657 [Streptomyces roseosporus NRRL 11379] gi|291448893|ref|ZP_06588283.1| conserved hypothetical protein [Streptomyces roseosporus NRRL 15998] gi|291351840|gb|EFE78744.1| conserved hypothetical protein [Streptomyces roseosporus NRRL 15998] Length=561 Score = 535 bits (1379), Expect = 4e-150, Method: Compositional matrix adjust. Identities = 256/409 (63%), Positives = 313/409 (77%), Gaps = 2/409 (0%) Query 1 MAQGLKLGLHIPLWAGYACSTLIIFPLVVYGMKVLSQLQLWTTPLWLILMAAPFGYLVVS 60 MAQGLKLG +PLW GYA STL++ PLV+YGMK LS+LQ+WTTP+WL+LM P YLV + Sbjct 145 MAQGLKLGFGLPLWLGYAVSTLMVIPLVIYGMKALSKLQVWTTPIWLLLMVGPLVYLVAT 204 Query 61 HPDSIGQFFSYAGKDGHGGLSFGSVLLAAGVCLSLIAQIAEQIDYLRFMPPRTPENANRW 120 P ++ F +YAG DG G L+ SVLL AGVCLSLIAQI EQIDYLRFMPP+T N W Sbjct 205 DPGTVDSFLAYAGTDGEGSLNTASVLLGAGVCLSLIAQIGEQIDYLRFMPPKTEANRRSW 264 Query 121 WTWTLLAGPGWVAFGATKQIIGLFLAVYLMANIPGSSTIANQPVHQFMQIYRTFVPGWLA 180 WT ++AGPGWV GA KQ IG+FLAVY+++ + ++ A +P+ QF + +P WL Sbjct 265 WTAMVMAGPGWVVLGAIKQAIGVFLAVYILSEVGPAA--ATEPIQQFRGAFDAMMPSWLV 322 Query 181 LTLAVILVVLSQIKINVTNAYSGSLAWTNSFTRLTKHYPGRVVFLGVNLAIALILMEANM 240 + LAV+LVV+SQIKINVTNAYSGSLAWTNSFTR+T+HYPGR++F+ VNLA ALILMEA+M Sbjct 323 VPLAVVLVVISQIKINVTNAYSGSLAWTNSFTRVTRHYPGRMIFVLVNLAFALILMEADM 382 Query 241 FDFLNTILGCYANCGMAWVVAVASDIGFNKYLLGLSPKTPEFRRGMLYAINPVGFGSLLL 300 F FLN+ILG Y+NC +AWVV VA+DIG NKYLL LSP PEFRRGMLYA+NPVG + Sbjct 383 FSFLNSILGFYSNCAIAWVVTVATDIGVNKYLLKLSPHAPEFRRGMLYAVNPVGVTAFTA 442 Query 301 AAGLSIVTFFGGLGAALQPYSPLVAIVTALVMPPILAAATKGKYYLRRTHDGIDLPMYDE 360 A+GLSI +F G +QPYSP+ A+V A V+ P++A T+G+YYLRR+ DGI +P+ D Sbjct 443 ASGLSIAMYFHAFGGTVQPYSPVAAVVIAFVLTPLMAIVTRGRYYLRRSDDGIPVPLLDA 502 Query 361 HGNPSAAVLTCHVCHQDFERPDMLACQTHGAHVCSLCLSTDKQAEHVLP 409 GNPSA CHVC Q FERPD+ AC H A VCSLCLSTDK +HVLP Sbjct 503 EGNPSAVTYDCHVCRQTFERPDLAACPAHDAMVCSLCLSTDKAGDHVLP 551 >gi|302517405|ref|ZP_07269747.1| permease for cytosine/purines uracil thiamine allantoin [Streptomyces sp. SPB78] gi|302426300|gb|EFK98115.1| permease for cytosine/purines uracil thiamine allantoin [Streptomyces sp. SPB78] Length=563 Score = 535 bits (1378), Expect = 5e-150, Method: Compositional matrix adjust. Identities = 258/409 (64%), Positives = 316/409 (78%), Gaps = 2/409 (0%) Query 1 MAQGLKLGLHIPLWAGYACSTLIIFPLVVYGMKVLSQLQLWTTPLWLILMAAPFGYLVVS 60 MAQGLKLGLH+PLW GY ST ++ PLV+YGMK LS+LQ+WTTP+WL+LM P Y+V Sbjct 156 MAQGLKLGLHLPLWIGYLVSTFMVIPLVIYGMKALSKLQVWTTPVWLLLMVGPLVYVVAE 215 Query 61 HPDSIGQFFSYAGKDGHGGLSFGSVLLAAGVCLSLIAQIAEQIDYLRFMPPRTPENANRW 120 P ++ +F +YAG G GG++ SVLL AGVCLSLIAQI EQIDYLRFMPPRT +N W Sbjct 216 DPGTVDRFLAYAGTSGDGGINTASVLLGAGVCLSLIAQIGEQIDYLRFMPPRTDKNRRAW 275 Query 121 WTWTLLAGPGWVAFGATKQIIGLFLAVYLMANIPGSSTIANQPVHQFMQIYRTFVPGWLA 180 WT ++AGPGWV GA KQ IG+FLAVY+++ + ++ A +P+ QF + +P WL Sbjct 276 WTAVVMAGPGWVVLGALKQAIGVFLAVYILSGVGPAA--ATEPIQQFRGAFDAMMPSWLV 333 Query 181 LTLAVILVVLSQIKINVTNAYSGSLAWTNSFTRLTKHYPGRVVFLGVNLAIALILMEANM 240 + LAV+LVV+SQIKINVTNAYSGSLAWTNSFTR+T+ YPGR+VF+ VNL AL LMEA+M Sbjct 334 VPLAVVLVVISQIKINVTNAYSGSLAWTNSFTRVTRRYPGRMVFVLVNLGFALALMEADM 393 Query 241 FDFLNTILGCYANCGMAWVVAVASDIGFNKYLLGLSPKTPEFRRGMLYAINPVGFGSLLL 300 F FLN IL Y+NC +AWVV VA+DI NKY+L LSP PEFRRGMLYA+NPVG S + Sbjct 394 FSFLNDILSFYSNCAIAWVVTVATDIMVNKYVLKLSPLQPEFRRGMLYAVNPVGVVSFVA 453 Query 301 AAGLSIVTFFGGLGAALQPYSPLVAIVTALVMPPILAAATKGKYYLRRTHDGIDLPMYDE 360 A+GLSI +F LG ALQPYSP+ A+V A V+ P++A T+GKYYLRRT DG+ P+ DE Sbjct 454 ASGLSIAMYFHALGDALQPYSPVAAVVIAFVLTPVMALVTRGKYYLRRTDDGVAEPLLDE 513 Query 361 HGNPSAAVLTCHVCHQDFERPDMLACQTHGAHVCSLCLSTDKQAEHVLP 409 GNPSA+ TCHVC Q++ERPD+ AC TH AHVCSLCLSTD+ EHVLP Sbjct 514 SGNPSASPYTCHVCAQEYERPDVTACVTHEAHVCSLCLSTDRSGEHVLP 562 >gi|318058952|ref|ZP_07977675.1| integral membrane protein [Streptomyces sp. SA3_actG] gi|318078912|ref|ZP_07986244.1| integral membrane protein [Streptomyces sp. SA3_actF] Length=563 Score = 535 bits (1377), Expect = 7e-150, Method: Compositional matrix adjust. Identities = 258/409 (64%), Positives = 316/409 (78%), Gaps = 2/409 (0%) Query 1 MAQGLKLGLHIPLWAGYACSTLIIFPLVVYGMKVLSQLQLWTTPLWLILMAAPFGYLVVS 60 MAQGLKLGLH+PLW GY ST ++ PLV+YGMK LS+LQ+WTTP+WL+LM P Y+V Sbjct 156 MAQGLKLGLHLPLWIGYLVSTFMVIPLVIYGMKALSKLQVWTTPVWLLLMVGPLVYVVAE 215 Query 61 HPDSIGQFFSYAGKDGHGGLSFGSVLLAAGVCLSLIAQIAEQIDYLRFMPPRTPENANRW 120 P ++ +F +YAG G GG++ SVLL AGVCLSLIAQI EQIDYLRFMPPRT +N W Sbjct 216 DPGTVDRFLAYAGTSGDGGINTASVLLGAGVCLSLIAQIGEQIDYLRFMPPRTDKNRRAW 275 Query 121 WTWTLLAGPGWVAFGATKQIIGLFLAVYLMANIPGSSTIANQPVHQFMQIYRTFVPGWLA 180 WT ++AGPGWV GA KQ IG+FLAVY+++ + ++ A +P+ QF + +P WL Sbjct 276 WTAVVMAGPGWVVLGALKQAIGVFLAVYILSGVGPAA--ATEPIQQFRGAFDAMMPSWLV 333 Query 181 LTLAVILVVLSQIKINVTNAYSGSLAWTNSFTRLTKHYPGRVVFLGVNLAIALILMEANM 240 + LAV+LVV+SQIKINVTNAYSGSLAWTNSFTR+T+ YPGR+VF+ VNL AL LMEA+M Sbjct 334 VPLAVVLVVISQIKINVTNAYSGSLAWTNSFTRVTRRYPGRMVFVLVNLGFALALMEADM 393 Query 241 FDFLNTILGCYANCGMAWVVAVASDIGFNKYLLGLSPKTPEFRRGMLYAINPVGFGSLLL 300 F FLN IL Y+NC +AWVV VA+DI NKY+L LSP PEFRRGMLYA+NPVG S + Sbjct 394 FSFLNDILSFYSNCAIAWVVTVATDIMVNKYVLKLSPLQPEFRRGMLYAVNPVGVVSFVA 453 Query 301 AAGLSIVTFFGGLGAALQPYSPLVAIVTALVMPPILAAATKGKYYLRRTHDGIDLPMYDE 360 A+GLSI +F LG ALQPYSP+ A+V A V+ P++A T+GKYYLRRT DG+ P+ DE Sbjct 454 ASGLSIAMYFHALGDALQPYSPVAAVVIAFVLTPVMALVTRGKYYLRRTDDGVAEPLLDE 513 Query 361 HGNPSAAVLTCHVCHQDFERPDMLACQTHGAHVCSLCLSTDKQAEHVLP 409 GNPSA+ TCHVC Q++ERPD+ AC TH AHVCSLCLSTD+ EHVLP Sbjct 514 SGNPSASPYTCHVCAQEYERPDVTACVTHEAHVCSLCLSTDRSGEHVLP 562 >gi|296395010|ref|YP_003659894.1| hypothetical protein Srot_2629 [Segniliparus rotundus DSM 44985] gi|296182157|gb|ADG99063.1| conserved hypothetical protein [Segniliparus rotundus DSM 44985] Length=571 Score = 532 bits (1370), Expect = 5e-149, Method: Compositional matrix adjust. Identities = 275/416 (67%), Positives = 331/416 (80%), Gaps = 11/416 (2%) Query 1 MAQGLKLGLHIPLWAGYACSTLIIFPLVVYGMKVLSQLQLWTTPLWLILMAAPFGYLVVS 60 MAQGLKLGL IPLW GY S+ +I PLV+YGMK LS LQ+WTTP+WL+LM APFGYL+ Sbjct 147 MAQGLKLGLSIPLWLGYLFSSALIIPLVMYGMKALSALQVWTTPIWLVLMVAPFGYLLWR 206 Query 61 HPDSIGQFFSYAGKDGHGGLSFGSVLLAAGVCLSLIAQIAEQIDYLRFMPPRTPENANRW 120 HP+S FF+YAGKD H G+SF +LAAGVCLSLIAQIAEQ DYLRFMPP+TP+N+ W Sbjct 207 HPESASAFFAYAGKD-HCGVSFAGSMLAAGVCLSLIAQIAEQADYLRFMPPKTPQNSRTW 265 Query 121 WTWTLLAGPGWVAFGATKQIIGLFLAVYLM--ANIPGSSTIANQPVHQFMQIYRTFVPGW 178 W+ LLAGPGWV FGA KQ++GLFLAVYL+ A PG +ANQPVHQF+ IY+ +P W Sbjct 266 WSAVLLAGPGWVVFGAVKQVVGLFLAVYLIGGAVDPG---VANQPVHQFLAIYQNMMPPW 322 Query 179 LALTLAVILVVLSQIKINVTNAYSGSLAWTNSFTRLTKHYPGRVVFLGVNLAIALILMEA 238 A+ LAV+LVV+SQIKINVTNAYSGSLAWTNSFTR+TKHYPGR++F+ +N+ IAL LMEA Sbjct 323 AAMALAVVLVVISQIKINVTNAYSGSLAWTNSFTRVTKHYPGRLLFVVLNVGIALALMEA 382 Query 239 NMFDFLNTILGCYANCGMAWVVAVASDIGFNKYLLGLSPKTPEFRRGMLYAINPVGFGSL 298 +MF FLN IL YANCG+AW+V VASDI NK+LL +SPK PEFRRGMLY PVGFGS+ Sbjct 383 DMFAFLNNILSFYANCGIAWIVTVASDIAINKHLLKISPKVPEFRRGMLYDFCPVGFGSM 442 Query 299 LLAAGLSIVTFFGGLGAALQPYSPLVAIVTALVMPPILAAATKGKYYLRRTHDGIDLPMY 358 ++AAG+SI+ +FG LG+A+QPYSPLVA V ALV+PP+LA AT G++YLRR DGI +PM+ Sbjct 443 MIAAGVSILAYFGALGSAIQPYSPLVAAVLALVLPPVLALATGGRHYLRRQDDGIAVPMF 502 Query 359 DEHGNPSAAVLTCHVCHQDFERPDMLACQTHG-----AHVCSLCLSTDKQAEHVLP 409 DEHGNPS+ +L CHV FERPDM+A G ++ SL LS DK H+LP Sbjct 503 DEHGNPSSELLHCHVTGMQFERPDMIASAVPGPDGEVRYISSLALSCDKTGAHILP 558 >gi|294633496|ref|ZP_06712055.1| sensor histidine kinase/response regulator [Streptomyces sp. e14] gi|292831277|gb|EFF89627.1| sensor histidine kinase/response regulator [Streptomyces sp. e14] Length=550 Score = 531 bits (1368), Expect = 8e-149, Method: Compositional matrix adjust. Identities = 265/409 (65%), Positives = 312/409 (77%), Gaps = 3/409 (0%) Query 1 MAQGLKLGLHIPLWAGYACSTLIIFPLVVYGMKVLSQLQLWTTPLWLILMAAPFGYLVVS 60 MAQGLKLGLH+PLW GY ST ++ PLVVYGMK LS+LQ+WTTP+WL+LM AP YL+ Sbjct 139 MAQGLKLGLHLPLWIGYLVSTFMVIPLVVYGMKALSRLQVWTTPVWLVLMIAPLVYLIAE 198 Query 61 HPDSIGQFFSYAGKDGHGGLSFGSVLLAAGVCLSLIAQIAEQIDYLRFMPPRTPENANRW 120 P S+ F +YAG DG G +S SVLL AGVCLSLIAQI EQIDYLRFMPPRT N W Sbjct 199 DPGSVDHFLAYAGTDGDG-ISAASVLLGAGVCLSLIAQIGEQIDYLRFMPPRTDANRRTW 257 Query 121 WTWTLLAGPGWVAFGATKQIIGLFLAVYLMANIPGSSTIANQPVHQFMQIYRTFVPGWLA 180 WT L+AGPGWV GA KQ IG+FLAV+++A + ++ A +P+ QF + +P WL Sbjct 258 WTAVLMAGPGWVVLGALKQAIGVFLAVHILAEVGPAA--ATEPIQQFRGAFDAMMPSWLV 315 Query 181 LTLAVILVVLSQIKINVTNAYSGSLAWTNSFTRLTKHYPGRVVFLGVNLAIALILMEANM 240 + LAV+LVV+SQIKINVTNAYSGSLAWTNSFTR+T HYPGR+VF+ VNL AL LMEA+M Sbjct 316 VPLAVVLVVISQIKINVTNAYSGSLAWTNSFTRVTGHYPGRMVFVLVNLGFALALMEADM 375 Query 241 FDFLNTILGCYANCGMAWVVAVASDIGFNKYLLGLSPKTPEFRRGMLYAINPVGFGSLLL 300 F FLN ILG Y+NC +AWVV VA+DIG NKYLL LSP PEFRRGMLYA+NPVG S + Sbjct 376 FSFLNDILGFYSNCAIAWVVTVATDIGVNKYLLKLSPLQPEFRRGMLYAVNPVGVVSFVA 435 Query 301 AAGLSIVTFFGGLGAALQPYSPLVAIVTALVMPPILAAATKGKYYLRRTHDGIDLPMYDE 360 A+GLSI +F G LQPYSP+ A V A V+ P++A TKG+YYLRRT DGI P+ D Sbjct 436 ASGLSIAMYFHAFGDTLQPYSPVAAAVLAFVLTPLMAIVTKGRYYLRRTDDGIAEPLLDA 495 Query 361 HGNPSAAVLTCHVCHQDFERPDMLACQTHGAHVCSLCLSTDKQAEHVLP 409 GNPSA VL CHVC Q +ERPD+ AC+TH A VCSLCLSTDK +HVLP Sbjct 496 DGNPSAVVLDCHVCLQPYERPDLTACRTHDAVVCSLCLSTDKIGDHVLP 544 >gi|302549223|ref|ZP_07301565.1| permease for cytosine/purines uracil thiamine allantoin [Streptomyces viridochromogenes DSM 40736] gi|302466841|gb|EFL29934.1| permease for cytosine/purines uracil thiamine allantoin [Streptomyces viridochromogenes DSM 40736] Length=569 Score = 523 bits (1347), Expect = 2e-146, Method: Compositional matrix adjust. Identities = 248/393 (64%), Positives = 298/393 (76%), Gaps = 2/393 (0%) Query 20 STLIIFPLVVYGMKVLSQLQLWTTPLWLILMAAPFGYLVVSHPDSIGQFFSYAGKDGHGG 79 STL++ PLV+YGM LS+LQ+WTTP+WL+LM P YLV + P ++ +F +YAG DG GG Sbjct 179 STLMVIPLVIYGMTALSKLQVWTTPIWLLLMVGPLVYLVATDPGTVDRFLAYAGTDGDGG 238 Query 80 LSFGSVLLAAGVCLSLIAQIAEQIDYLRFMPPRTPENANRWWTWTLLAGPGWVAFGATKQ 139 ++ SVLL AGVCLSLIAQI EQIDYLRFMPP+T N WWT +AGPGWV GA KQ Sbjct 239 VNTASVLLGAGVCLSLIAQIGEQIDYLRFMPPKTEANKQSWWTAVGMAGPGWVVLGALKQ 298 Query 140 IIGLFLAVYLMANIPGSSTIANQPVHQFMQIYRTFVPGWLALTLAVILVVLSQIKINVTN 199 IG+FLAVY++A + T A +P+ QF + +P W+ L LAV LVV+SQIKINVTN Sbjct 299 AIGVFLAVYIIAEV--GPTAAPEPIQQFKHAFDAMMPSWIVLPLAVALVVISQIKINVTN 356 Query 200 AYSGSLAWTNSFTRLTKHYPGRVVFLGVNLAIALILMEANMFDFLNTILGCYANCGMAWV 259 AYSGSLAWTNSFTR+T+ YPGR+VF+ VNL AL LMEA+MF FLN+ILG Y+NC +AWV Sbjct 357 AYSGSLAWTNSFTRVTRRYPGRMVFVLVNLGFALALMEADMFSFLNSILGFYSNCAIAWV 416 Query 260 VAVASDIGFNKYLLGLSPKTPEFRRGMLYAINPVGFGSLLLAAGLSIVTFFGGLGAALQP 319 V VA+DIG NKY+L LSP PEFRRGMLYA+NPVG + + A+GLSI +F LG LQP Sbjct 417 VTVATDIGINKYVLKLSPHAPEFRRGMLYAVNPVGVVAFVAASGLSIALYFHALGDTLQP 476 Query 320 YSPLVAIVTALVMPPILAAATKGKYYLRRTHDGIDLPMYDEHGNPSAAVLTCHVCHQDFE 379 YSP+ A V A V+ P++A TKG+YYLRRT DGI PM DE GNPSAA CHVC Q FE Sbjct 477 YSPVAAAVIAFVLTPLMAVVTKGRYYLRRTDDGIAEPMLDEDGNPSAATYECHVCRQRFE 536 Query 380 RPDMLACQTHGAHVCSLCLSTDKQAEHVLPGLA 412 RPD+ AC+TH A VCSLCLSTD+ +HVLP A Sbjct 537 RPDVAACRTHDAVVCSLCLSTDRVGDHVLPATA 569 >gi|297153537|gb|ADI03249.1| putative integral membrane protein [Streptomyces bingchenggensis BCW-1] Length=549 Score = 522 bits (1344), Expect = 5e-146, Method: Compositional matrix adjust. Identities = 248/393 (64%), Positives = 302/393 (77%), Gaps = 2/393 (0%) Query 20 STLIIFPLVVYGMKVLSQLQLWTTPLWLILMAAPFGYLVVSHPDSIGQFFSYAGKDGHGG 79 STL++ PLV+YGMK LS+LQ+WTTP+WL+LM P YLV + P +I +F +YAG DG GG Sbjct 159 STLMVIPLVIYGMKALSKLQVWTTPIWLLLMVGPLVYLVTTDPGTIDRFLAYAGTDGDGG 218 Query 80 LSFGSVLLAAGVCLSLIAQIAEQIDYLRFMPPRTPENANRWWTWTLLAGPGWVAFGATKQ 139 ++ SVLL AGVCLSLIAQI EQIDYLRFMPP+T N WWT ++AGPGWV GA KQ Sbjct 219 VNTASVLLGAGVCLSLIAQIGEQIDYLRFMPPKTEANKRGWWTAVIMAGPGWVVLGALKQ 278 Query 140 IIGLFLAVYLMANIPGSSTIANQPVHQFMQIYRTFVPGWLALTLAVILVVLSQIKINVTN 199 IG+FLAVY++A + ++ A +P+ QF + +P W+ + LAV LVV+SQIKINVTN Sbjct 279 AIGVFLAVYILAKVGPAA--ATEPIQQFRGAFDAMMPSWMVIPLAVALVVISQIKINVTN 336 Query 200 AYSGSLAWTNSFTRLTKHYPGRVVFLGVNLAIALILMEANMFDFLNTILGCYANCGMAWV 259 AYSGSLAWTNSFTR+TKHYPGR+VF+ VNL AL LMEA+MF FLN ILG Y+NC +AWV Sbjct 337 AYSGSLAWTNSFTRVTKHYPGRMVFVLVNLGFALALMEADMFSFLNDILGFYSNCAIAWV 396 Query 260 VAVASDIGFNKYLLGLSPKTPEFRRGMLYAINPVGFGSLLLAAGLSIVTFFGGLGAALQP 319 V VA+DIG NKYLL +SP PEFRRGML+A+NPVG + + A+GLSI +F LG LQP Sbjct 397 VTVATDIGINKYLLKISPLQPEFRRGMLHAVNPVGVVAFVAASGLSIAMYFHLLGDTLQP 456 Query 320 YSPLVAIVTALVMPPILAAATKGKYYLRRTHDGIDLPMYDEHGNPSAAVLTCHVCHQDFE 379 YSP+ A V A V+ P++A TKG+YYLRRT DGI P+ D GNPS+ L CHVCHQ +E Sbjct 457 YSPVAAAVIAFVLTPLVAIITKGRYYLRRTDDGIAEPLLDPDGNPSSLTLDCHVCHQSYE 516 Query 380 RPDMLACQTHGAHVCSLCLSTDKQAEHVLPGLA 412 RPD+ AC TH A VCSLCLSTDK +HVLPG+A Sbjct 517 RPDLTACATHDAVVCSLCLSTDKVGDHVLPGIA 549 >gi|170782693|ref|YP_001711027.1| putative integral membrane protein [Clavibacter michiganensis subsp. sepedonicus] gi|169157263|emb|CAQ02448.1| putative integral membrane protein [Clavibacter michiganensis subsp. sepedonicus] Length=568 Score = 516 bits (1328), Expect = 4e-144, Method: Compositional matrix adjust. Identities = 265/416 (64%), Positives = 321/416 (78%), Gaps = 7/416 (1%) Query 1 MAQGLKLGLHIPLWAGYACSTLIIFPLVVYGMKVLSQLQLWTTPLWLILMAAPFGYLVVS 60 MAQGL+LGL IP GYA STL++ PLV+YGMK LS+LQ+WTTPLWL+LM PF YLV++ Sbjct 150 MAQGLELGLGIPRPVGYAASTLLVIPLVIYGMKALSKLQVWTTPLWLVLMVIPFAYLVIA 209 Query 61 HPDSIGQFFSYAGKDGHGGLS-FGSVLLAAGVCLSLIAQIAEQIDYLRFMPPRTPENANR 119 +P S+G F +Y G+ G G + SV+LAAGVCLSLIAQIAEQIDYLRFMPP+T N Sbjct 210 NPGSVGTFLAYPGEGGGTGGADLASVMLAAGVCLSLIAQIAEQIDYLRFMPPKTDANRVA 269 Query 120 WWTWTLLAGPGWVAFGATKQIIGLFLAVYLMANI-PGSSTIANQPVHQFMQIYRTFVPGW 178 WW +LAGPGWV FGA KQ +GLF+AVYL+A + P +S AN+PVHQF+ +Y +PGW Sbjct 270 WWRAVILAGPGWVLFGAVKQAVGLFIAVYLIATLDPAASATANEPVHQFLGVYEQMMPGW 329 Query 179 LALTLAVILVVLSQIKINVTNAYSGSLAWTNSFTRLTKHYPGRVVFLGVNLAIALILMEA 238 LAL LAV+LVV+SQIKINVTNAYSGSLAWTNSFTR+T+ YPGR+VF+ VNLAIAL LME Sbjct 330 LALALAVVLVVISQIKINVTNAYSGSLAWTNSFTRVTRTYPGRMVFVIVNLAIALALMEL 389 Query 239 NMFDFLNTILGCYANCGMAWVVAVASDIGFNKYLLGLSPKTPEFRRGMLYAINPVGFGSL 298 NMFDFLNTILG YANCGMAW+V VA+DI NK++LGLSPK PEFRRGML+ NPVG SL Sbjct 390 NMFDFLNTILGFYANCGMAWIVTVATDIAINKHVLGLSPKHPEFRRGMLHDWNPVGVVSL 449 Query 299 LLAAGLSIVTFFGGLGAALQPYSPLVAIVTALVMPPILAAATKGKYYLRRTHDGIDLPMY 358 L+AG+SI FFG G + P+SP+ A+ A+V P++A T+G+YYLRRT DGIDLPM Sbjct 450 ALSAGISIAMFFGAFGPDIAPFSPMFAVGIAIVATPLMAILTRGRYYLRRTDDGIDLPML 509 Query 359 DEHGNPSAAVLTCHVCHQDFERPDMLACQTHGA-----HVCSLCLSTDKQAEHVLP 409 D GNPSAA+L CHV +FERPDM+ ++ SL L+TD+ +VLP Sbjct 510 DADGNPSAALLRCHVTGLEFERPDMILSAERAEDGSPQYISSLALATDRTGRYVLP 565 >gi|237785396|ref|YP_002906101.1| hypothetical protein ckrop_0802 [Corynebacterium kroppenstedtii DSM 44385] gi|237758308|gb|ACR17558.1| putative membrane protein [Corynebacterium kroppenstedtii DSM 44385] Length=560 Score = 503 bits (1296), Expect = 2e-140, Method: Compositional matrix adjust. Identities = 244/414 (59%), Positives = 312/414 (76%), Gaps = 6/414 (1%) Query 1 MAQGLKLGLHIPLWAGYACSTLIIFPLVVYGMKVLSQLQLWTTPLWLILMAAPFGYLVVS 60 M QGLK+GL IPLWAGY S+LI+ PLV+YGMK LS++Q T PLW+++M P L++ Sbjct 146 MGQGLKMGLGIPLWAGYLVSSLIVIPLVMYGMKSLSKIQKATNPLWIVMMVLPLIVLIIQ 205 Query 61 HPDSIGQFFSYAGKDGHGGLSFGSVLLAAGVCLSLIAQIAEQIDYLRFMPPRTPENANRW 120 HP S+ F YAG +G G F S++LAAGVCLSL AQIAE IDY+RFMPP+TP+N +W Sbjct 206 HPSSVHTFAHYAG-NGPGHADFASMMLAAGVCLSLTAQIAENIDYIRFMPPKTPDNKRKW 264 Query 121 WTWTLLAGPGWVAFGATKQIIGLFLAVYLMANIPGSSTIANQPVHQFMQIYRTFVPGWLA 180 WT +L+GPGWV FGATKQIIG+FLAVY+MA + S A++PVHQF +Y +P WLA Sbjct 265 WTAVILSGPGWVIFGATKQIIGVFLAVYVMAVLNDSPGTASEPVHQFFAMYTNMMPTWLA 324 Query 181 LTLAVILVVLSQIKINVTNAYSGSLAWTNSFTRLTKHYPGRVVFLGVNLAIALILMEANM 240 +TLAVILVV+SQIKINVTNAYSGSLAWTN++TRLT+ YPGR+VF+ VN+ IAL LME NM Sbjct 325 ITLAVILVVMSQIKINVTNAYSGSLAWTNAYTRLTRRYPGRIVFVFVNVGIALSLMEFNM 384 Query 241 FDFLNTILGCYANCGMAWVVAVASDIGFNKYLLGLSPKTPEFRRGMLYAINPVGFGSLLL 300 F LN+ILG Y+N +AW+ VASDI NKY+LG+SP+ PE+RRGM++ INPVG G+LLL Sbjct 385 FSMLNSILGFYSNVAIAWIFTVASDIAINKYVLGISPRYPEYRRGMIFPINPVGIGALLL 444 Query 301 AAGLSIVTFFGGLGAALQPYSPLVAIVTALVMPPILAAATKGKYYLRRTHDGIDLPMYDE 360 +A SI +FG LGA +QPYS L+A A+V P++A T+G++YLRRT DG+D P++D+ Sbjct 445 SATTSIAAYFGVLGATIQPYSALLAAAIAVVATPLIAIITRGQFYLRRTDDGVDSPLFDD 504 Query 361 HGNPSAAVLTCHVCHQDFERPDMLACQT-----HGAHVCSLCLSTDKQAEHVLP 409 HGNPS + C V + ERPD+LA ++ SL L+TD+Q HVLP Sbjct 505 HGNPSDELFRCCVTGEMVERPDVLASAVPSPTGEKQYISSLALTTDRQGRHVLP 558 >gi|325121838|gb|ADY81361.1| signal transduction histidine kinase containing a receiver domain (hybrid) and a purine-cytosine permease domain [Acinetobacter calcoaceticus PHEA-2] Length=548 Score = 494 bits (1271), Expect = 1e-137, Method: Compositional matrix adjust. Identities = 234/401 (59%), Positives = 289/401 (73%), Gaps = 2/401 (0%) Query 1 MAQGLKLGLHIPLWAGYACSTLIIFPLVVYGMKVLSQLQLWTTPLWLILMAAPFGYLVVS 60 MAQGL LGL IPLWAGY ST+++ PLV+YGMK LS+LQ+WTTPLWL+LM P YL+ Sbjct 149 MAQGLLLGLDIPLWAGYLISTVMVIPLVIYGMKALSKLQVWTTPLWLVLMIGPVAYLIYQ 208 Query 61 HPDSIGQFFSYAGKDGHGGLSFGSVLLAAGVCLSLIAQIAEQIDYLRFMPPRTPENANRW 120 P + QF ++ G +G + +++L AG+CLSLI QI EQIDYLRFMP +T EN+ W Sbjct 209 EPTLVSQFATFTGHEGFAPVDMAAIMLGAGICLSLIMQIGEQIDYLRFMPAKTKENSKAW 268 Query 121 WTWTLLAGPGWVAFGATKQIIGLFLAVYLMANIPGSSTIANQPVHQFMQIYRTFVPGWLA 180 W + AGPGWV GA KQIIG FL YL+ IPG ++ +PV QF + +PGW A Sbjct 269 WAAVISAGPGWVILGAIKQIIGAFLGFYLLTKIPGVNS--TEPVQQFNAAFHDMLPGWAA 326 Query 181 LTLAVILVVLSQIKINVTNAYSGSLAWTNSFTRLTKHYPGRVVFLGVNLAIALILMEANM 240 LTLAVILVV+SQIKINVTNAYSGSLAWT+++TR++KHYPGR+VF+ VNLAIAL LME NM Sbjct 327 LTLAVILVVISQIKINVTNAYSGSLAWTSAYTRISKHYPGRIVFVMVNLAIALALMEGNM 386 Query 241 FDFLNTILGCYANCGMAWVVAVASDIGFNKYLLGLSPKTPEFRRGMLYAINPVGFGSLLL 300 F L ILG Y+N +AWVV VA+DI NKY+L LSPK PE+RR MLY +NPVG + L+ Sbjct 387 FAVLGKILGFYSNFAIAWVVVVATDISINKYVLKLSPKEPEYRRDMLYNVNPVGMVAFLV 446 Query 301 AAGLSIVTFFGGLGAALQPYSPLVAIVTALVMPPILAAATKGKYYLRRTHDGIDLPMYDE 360 +AGLSI FFG LG+ L PYSPL+A+V A V+ PI+ TKGKYY++ DGI P YD Sbjct 447 SAGLSIAAFFGLLGSFLAPYSPLIALVLAFVLTPIMGLLTKGKYYIKSHDDGIKEPRYDA 506 Query 361 HGNPSAAVLTCHVCHQDFERPDMLACQTHGAHVCSLCLSTD 401 G P A V C VC Q +ERPD++ H +CSLC + D Sbjct 507 EGTPVATVYHCRVCEQGYERPDIMFSHKHNGTICSLCKTLD 547 >gi|227549920|ref|ZP_03979969.1| permease for cytosine/purines uracil thiamine allantoin [Corynebacterium lipophiloflavum DSM 44291] gi|227078016|gb|EEI15979.1| permease for cytosine/purines uracil thiamine allantoin [Corynebacterium lipophiloflavum DSM 44291] Length=506 Score = 491 bits (1265), Expect = 8e-137, Method: Compositional matrix adjust. Identities = 241/414 (59%), Positives = 306/414 (74%), Gaps = 6/414 (1%) Query 1 MAQGLKLGLHIPLWAGYACSTLIIFPLVVYGMKVLSQLQLWTTPLWLILMAAPFGYLVVS 60 MAQGL+LGL +PLW GY STLIIFPLV+YGMK+LS+LQ WT PLWL+++ P LVV Sbjct 87 MAQGLRLGLGVPLWLGYLVSTLIIFPLVIYGMKLLSKLQTWTNPLWLVMIVLPLIILVVQ 146 Query 61 HPDSIGQFFSYAGKDGHGGLSFGSVLLAAGVCLSLIAQIAEQIDYLRFMPPRTPENANRW 120 P ++ +F +Y G +G G SF +++LAAGVCL+L+AQIAE IDY+RFMPP+TPEN+ W Sbjct 147 EPSTVTEFLNYTG-EGTGEASFAAMMLAAGVCLALVAQIAENIDYIRFMPPKTPENSRSW 205 Query 121 WTWTLLAGPGWVAFGATKQIIGLFLAVYLMANIPGSSTIANQPVHQFMQIYRTFVPGWLA 180 WT ++AGPGWV FGATKQI+G+FLAVY+M++ S+ A++PV QF +Y+ +P WLA Sbjct 206 WTSVIMAGPGWVFFGATKQILGVFLAVYVMSHHGASAAEASEPVRQFFALYQEMMPDWLA 265 Query 181 LTLAVILVVLSQIKINVTNAYSGSLAWTNSFTRLTKHYPGRVVFLGVNLAIALILMEANM 240 +TLAV LVV+SQIKINVTNAYSGSLAWTNS+TR+TK YPGR F+ NLAIAL LME NM Sbjct 266 VTLAVFLVVVSQIKINVTNAYSGSLAWTNSYTRITKSYPGRTFFVFFNLAIALALMEFNM 325 Query 241 FDFLNTILGCYANCGMAWVVAVASDIGFNKYLLGLSPKTPEFRRGMLYAINPVGFGSLLL 300 F LN +LG Y+N +AW+ VA+DI NK LL +SP+ PE+RRGM+ NPVG GSL L Sbjct 326 FGMLNFVLGFYSNLAIAWIFTVAADIAINKSLLKISPEYPEYRRGMIANFNPVGLGSLGL 385 Query 301 AAGLSIVTFFGGLGAALQPYSPLVAIVTALVMPPILAAATKGKYYLRRTHDGIDLPMYDE 360 +A +S+ FFG G A +PYS L A + A+V P++A TKGKYY RRTHDGID P++D Sbjct 386 SAIVSVAMFFGAFGEAARPYSALAAALIAVVCTPLIAVLTKGKYYRRRTHDGIDAPLFDA 445 Query 361 HGNPSAAVLTCHVCHQDFERPDMLACQTHG-----AHVCSLCLSTDKQAEHVLP 409 H NPS TC V ++ ERPD++ T ++ SL L+ DK EHVLP Sbjct 446 HFNPSDERFTCCVTGEEVERPDVIRSATDHPDGSPRYISSLALTMDKTGEHVLP 499 >gi|299770582|ref|YP_003732608.1| hypothetical protein AOLE_11730 [Acinetobacter sp. DR1] gi|298700670|gb|ADI91235.1| hypothetical protein AOLE_11730 [Acinetobacter sp. DR1] Length=538 Score = 487 bits (1254), Expect = 1e-135, Method: Compositional matrix adjust. Identities = 236/401 (59%), Positives = 290/401 (73%), Gaps = 2/401 (0%) Query 1 MAQGLKLGLHIPLWAGYACSTLIIFPLVVYGMKVLSQLQLWTTPLWLILMAAPFGYLVVS 60 MAQGL LGL IPLWAGY ST+++ PLV+YGMK LS+LQ+WTTPLWLILM P YL+ Sbjct 139 MAQGLLLGLGIPLWAGYLISTVMVIPLVIYGMKALSKLQVWTTPLWLILMIGPVAYLIYQ 198 Query 61 HPDSIGQFFSYAGKDGHGGLSFGSVLLAAGVCLSLIAQIAEQIDYLRFMPPRTPENANRW 120 P + QF ++ GK+G + +++L AG+CLSLI QI EQIDYLRFMP +T EN+ W Sbjct 199 EPTLVSQFATFTGKEGFATVDMAAIMLGAGICLSLIMQIGEQIDYLRFMPAKTKENSKAW 258 Query 121 WTWTLLAGPGWVAFGATKQIIGLFLAVYLMANIPGSSTIANQPVHQFMQIYRTFVPGWLA 180 W + AGPGWV GA KQIIG FL YL+ IPG ++ +PV QF + +PGW A Sbjct 259 WAAVISAGPGWVILGAIKQIIGAFLGFYLLTKIPGVNS--TEPVQQFNAAFHDMLPGWAA 316 Query 181 LTLAVILVVLSQIKINVTNAYSGSLAWTNSFTRLTKHYPGRVVFLGVNLAIALILMEANM 240 LTLAVILVV+SQIKINVTNAYSGSLAWT+++TR++KHYPGR+VF+ VNLAIAL LME NM Sbjct 317 LTLAVILVVISQIKINVTNAYSGSLAWTSAYTRISKHYPGRIVFVMVNLAIALALMEGNM 376 Query 241 FDFLNTILGCYANCGMAWVVAVASDIGFNKYLLGLSPKTPEFRRGMLYAINPVGFGSLLL 300 F L ILG Y+N +AWVV VA+DI NKY+L LSPK PE+RR MLY +NPVG + L+ Sbjct 377 FAVLGKILGFYSNFAIAWVVVVATDISINKYVLKLSPKEPEYRRDMLYNVNPVGMVAFLV 436 Query 301 AAGLSIVTFFGGLGAALQPYSPLVAIVTALVMPPILAAATKGKYYLRRTHDGIDLPMYDE 360 +AGLSI FFG LG+ L PYSPL+A+V A V+ PI+ TKGKYY++ DGI P YD Sbjct 437 SAGLSIAAFFGLLGSFLAPYSPLIALVLAFVLTPIMGLLTKGKYYIKSHDDGIKEPRYDA 496 Query 361 HGNPSAAVLTCHVCHQDFERPDMLACQTHGAHVCSLCLSTD 401 G P A V C VC Q +ERPD++ H +CSLC + D Sbjct 497 EGTPVATVYHCRVCEQGYERPDIMFSHKHNGTICSLCKTLD 537 >gi|293608424|ref|ZP_06690727.1| conserved hypothetical protein [Acinetobacter sp. SH024] gi|292828997|gb|EFF87359.1| conserved hypothetical protein [Acinetobacter sp. SH024] Length=538 Score = 485 bits (1248), Expect = 7e-135, Method: Compositional matrix adjust. Identities = 234/401 (59%), Positives = 289/401 (73%), Gaps = 2/401 (0%) Query 1 MAQGLKLGLHIPLWAGYACSTLIIFPLVVYGMKVLSQLQLWTTPLWLILMAAPFGYLVVS 60 MAQGL LGL IPLWAGY ST+++ PLV+YGMK LS+LQ+WTTPLWL+LM P YL+ Sbjct 139 MAQGLLLGLGIPLWAGYLISTVMVIPLVIYGMKALSKLQVWTTPLWLVLMIGPVAYLIYQ 198 Query 61 HPDSIGQFFSYAGKDGHGGLSFGSVLLAAGVCLSLIAQIAEQIDYLRFMPPRTPENANRW 120 P + QF ++ G +G + +++L AG+CLSLI QI EQIDYLRFMP +T EN+ W Sbjct 199 EPTLVSQFATFTGNEGFATVDMAAIMLGAGICLSLIMQIGEQIDYLRFMPAKTKENSKAW 258 Query 121 WTWTLLAGPGWVAFGATKQIIGLFLAVYLMANIPGSSTIANQPVHQFMQIYRTFVPGWLA 180 W + AGPGWV GA KQIIG FL YL+ IPG ++ +PV QF + +PGW A Sbjct 259 WAAVISAGPGWVILGAIKQIIGAFLGFYLLTKIPGVNS--TEPVQQFNAAFHDMLPGWAA 316 Query 181 LTLAVILVVLSQIKINVTNAYSGSLAWTNSFTRLTKHYPGRVVFLGVNLAIALILMEANM 240 LTLAVILVV+SQIKINVTNAYSGSLAWT+++TR++KHYPGR+VF+ VNLAIAL LME NM Sbjct 317 LTLAVILVVISQIKINVTNAYSGSLAWTSAYTRISKHYPGRIVFVMVNLAIALALMEGNM 376 Query 241 FDFLNTILGCYANCGMAWVVAVASDIGFNKYLLGLSPKTPEFRRGMLYAINPVGFGSLLL 300 F L ILG Y+N +AWVV VA+DI NKY+L LSPK PE+RR MLY +NPVG + L+ Sbjct 377 FAVLGKILGFYSNFAIAWVVVVATDISINKYVLKLSPKEPEYRRDMLYNVNPVGMVAFLV 436 Query 301 AAGLSIVTFFGGLGAALQPYSPLVAIVTALVMPPILAAATKGKYYLRRTHDGIDLPMYDE 360 +AGLSI FFG LG+ L PYSPL+A+V A V+ PI+ TKGKYY++ DGI P YD Sbjct 437 SAGLSIAAFFGLLGSFLAPYSPLIALVLAFVLTPIMGLLTKGKYYIKSHDDGIKEPRYDA 496 Query 361 HGNPSAAVLTCHVCHQDFERPDMLACQTHGAHVCSLCLSTD 401 G P A V C VC Q +ERPD++ H +CSLC + D Sbjct 497 EGTPVATVYHCRVCEQGYERPDIMFSHKHNGTICSLCKTLD 537 >gi|262379604|ref|ZP_06072760.1| sensor histidine kinase/response regulator [Acinetobacter radioresistens SH164] gi|262299061|gb|EEY86974.1| sensor histidine kinase/response regulator [Acinetobacter radioresistens SH164] Length=538 Score = 484 bits (1246), Expect = 1e-134, Method: Compositional matrix adjust. Identities = 232/402 (58%), Positives = 292/402 (73%), Gaps = 2/402 (0%) Query 1 MAQGLKLGLHIPLWAGYACSTLIIFPLVVYGMKVLSQLQLWTTPLWLILMAAPFGYLVVS 60 MAQGL LGL IPLWAGY ST+++ PLV+YGMK L++LQ+WTTP+WLILM P YL+ Sbjct 139 MAQGLLLGLGIPLWAGYLVSTVLVIPLVIYGMKALTKLQVWTTPIWLILMIGPVAYLIYQ 198 Query 61 HPDSIGQFFSYAGKDGHGGLSFGSVLLAAGVCLSLIAQIAEQIDYLRFMPPRTPENANRW 120 PD I QF +Y G +G L +++L AG+CLSLI QI EQIDYLRFMP +T EN+ W Sbjct 199 EPDLISQFAAYGGNEGFAVLDMAAIMLGAGICLSLIMQIGEQIDYLRFMPAKTKENSKSW 258 Query 121 WTWTLLAGPGWVAFGATKQIIGLFLAVYLMANIPGSSTIANQPVHQFMQIYRTFVPGWLA 180 W + AGPGWV GA KQIIG FL YL+ IP ++ +PV QF + +PGWLA Sbjct 259 WIAVISAGPGWVILGAIKQIIGAFLGFYLLTKIPDVNS--TEPVQQFNAAFHDMLPGWLA 316 Query 181 LTLAVILVVLSQIKINVTNAYSGSLAWTNSFTRLTKHYPGRVVFLGVNLAIALILMEANM 240 L+LAVILVV+SQIKINVTNAYSGSLAWT+++TR+TKHYPGR++F+ VNLAIAL LME NM Sbjct 317 LSLAVILVVISQIKINVTNAYSGSLAWTSAYTRITKHYPGRIIFVMVNLAIALALMEGNM 376 Query 241 FDFLNTILGCYANCGMAWVVAVASDIGFNKYLLGLSPKTPEFRRGMLYAINPVGFGSLLL 300 F L ILG Y+N +AWVV VA+DI NKY+L LSPK PE+RR MLY INPVG S L+ Sbjct 377 FAVLGKILGFYSNFAIAWVVVVATDIAINKYVLKLSPKEPEYRRDMLYNINPVGMVSFLV 436 Query 301 AAGLSIVTFFGGLGAALQPYSPLVAIVTALVMPPILAAATKGKYYLRRTHDGIDLPMYDE 360 AAGLSI FFG LG L PYSPL+A++ A ++ P++ TKGKYY++ ++DG+ YD Sbjct 437 AAGLSIAAFFGLLGEFLAPYSPLIALLVAFILTPLMGLLTKGKYYIKNSNDGLKEARYDT 496 Query 361 HGNPSAAVLTCHVCHQDFERPDMLACQTHGAHVCSLCLSTDK 402 G P A V C C++++ERPD++ H +CSLC + +K Sbjct 497 EGTPVATVYHCVACNENYERPDVMYSHRHSGVICSLCKTMEK 538 >gi|255318189|ref|ZP_05359428.1| periplasmic sensor hybrid histidine kinase [Acinetobacter radioresistens SK82] gi|255304735|gb|EET83913.1| periplasmic sensor hybrid histidine kinase [Acinetobacter radioresistens SK82] Length=535 Score = 484 bits (1246), Expect = 1e-134, Method: Compositional matrix adjust. Identities = 232/402 (58%), Positives = 292/402 (73%), Gaps = 2/402 (0%) Query 1 MAQGLKLGLHIPLWAGYACSTLIIFPLVVYGMKVLSQLQLWTTPLWLILMAAPFGYLVVS 60 MAQGL LGL IPLWAGY ST+++ PLV+YGMK L++LQ+WTTP+WLILM P YL+ Sbjct 136 MAQGLLLGLGIPLWAGYLVSTVLVIPLVIYGMKALTKLQVWTTPIWLILMIGPVAYLIYQ 195 Query 61 HPDSIGQFFSYAGKDGHGGLSFGSVLLAAGVCLSLIAQIAEQIDYLRFMPPRTPENANRW 120 PD I QF +Y G +G L +++L AG+CLSLI QI EQIDYLRFMP +T EN+ W Sbjct 196 EPDLISQFAAYGGNEGFAVLDMAAIMLGAGICLSLIMQIGEQIDYLRFMPAKTKENSKSW 255 Query 121 WTWTLLAGPGWVAFGATKQIIGLFLAVYLMANIPGSSTIANQPVHQFMQIYRTFVPGWLA 180 W + AGPGWV GA KQIIG FL YL+ IP ++ +PV QF + +PGWLA Sbjct 256 WIAVISAGPGWVILGAIKQIIGAFLGFYLLTKIPDVNS--TEPVQQFNAAFHDMLPGWLA 313 Query 181 LTLAVILVVLSQIKINVTNAYSGSLAWTNSFTRLTKHYPGRVVFLGVNLAIALILMEANM 240 L+LAVILVV+SQIKINVTNAYSGSLAWT+++TR+TKHYPGR++F+ VNLAIAL LME NM Sbjct 314 LSLAVILVVISQIKINVTNAYSGSLAWTSAYTRITKHYPGRIIFVMVNLAIALALMEGNM 373 Query 241 FDFLNTILGCYANCGMAWVVAVASDIGFNKYLLGLSPKTPEFRRGMLYAINPVGFGSLLL 300 F L ILG Y+N +AWVV VA+DI NKY+L LSPK PE+RR MLY INPVG S L+ Sbjct 374 FAVLGKILGFYSNFAIAWVVVVATDIAINKYVLKLSPKEPEYRRDMLYNINPVGMVSFLV 433 Query 301 AAGLSIVTFFGGLGAALQPYSPLVAIVTALVMPPILAAATKGKYYLRRTHDGIDLPMYDE 360 AAGLSI FFG LG L PYSPL+A++ A ++ P++ TKGKYY++ ++DG+ YD Sbjct 434 AAGLSIAAFFGLLGEFLAPYSPLIALLVAFILTPLMGLLTKGKYYIKNSNDGLKEARYDT 493 Query 361 HGNPSAAVLTCHVCHQDFERPDMLACQTHGAHVCSLCLSTDK 402 G P A V C C++++ERPD++ H +CSLC + +K Sbjct 494 EGTPVATVYHCVACNENYERPDVMYSHRHSGVICSLCKTMEK 535 Lambda K H 0.326 0.140 0.452 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 856034544960 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40