BLASTP 2.2.25+


Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.



Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
           15,229,318 sequences; 5,219,829,388 total letters



Query= Rv3460c

Length=124
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

gi|15610596|ref|NP_217977.1|  30S ribosomal protein S13 [Mycobact...   246    1e-63
gi|289755593|ref|ZP_06514971.1|  30S ribosomal protein S13 [Mycob...   243    5e-63
gi|296168682|ref|ZP_06850431.1|  30S ribosomal protein S13 [Mycob...   237    4e-61
gi|240167780|ref|ZP_04746439.1|  30S ribosomal protein S13 [Mycob...   237    5e-61
gi|342861866|ref|ZP_08718511.1|  30S ribosomal protein S13 [Mycob...   236    6e-61
gi|41410328|ref|NP_963164.1|  30S ribosomal protein S13 [Mycobact...   236    6e-61
gi|118616622|ref|YP_904954.1|  30S ribosomal protein S13 [Mycobac...   234    3e-60
gi|254819218|ref|ZP_05224219.1|  30S ribosomal protein S13 [Mycob...   234    4e-60
gi|15828062|ref|NP_302325.1|  30S ribosomal protein S13 [Mycobact...   232    2e-59
gi|108798082|ref|YP_638279.1|  30S ribosomal protein S13 [Mycobac...   228    3e-58
gi|118473987|ref|YP_885903.1|  30S ribosomal protein S13 [Mycobac...   226    1e-57
gi|563203|gb|AAB17598.1|  ribosomal protein S13 [Mycobacterium bo...   223    8e-57
gi|120402444|ref|YP_952273.1|  30S ribosomal protein S13 [Mycobac...   222    1e-56
gi|145225549|ref|YP_001136227.1|  30S ribosomal protein S13 [Myco...   219    8e-56
gi|289571694|ref|ZP_06451921.1|  30S ribosomal protein S13 rpsM [...   219    1e-55
gi|169630852|ref|YP_001704501.1|  30S ribosomal protein S13 [Myco...   216    7e-55
gi|333991923|ref|YP_004524537.1|  30S ribosomal protein S13 RpsM ...   215    2e-54
gi|296394893|ref|YP_003659777.1|  30S ribosomal protein S13 [Segn...   211    3e-53
gi|111023122|ref|YP_706094.1|  30S ribosomal protein S13 [Rhodoco...   210    5e-53
gi|226305367|ref|YP_002765325.1|  30S ribosomal protein S13 [Rhod...   210    6e-53
gi|118465138|ref|YP_883536.1|  30S ribosomal protein S13 [Mycobac...   210    6e-53
gi|312140892|ref|YP_004008228.1|  30S ribosomal protein s13 rpsm ...   208    2e-52
gi|317505826|ref|ZP_07963671.1|  30S ribosomal protein S13 [Segni...   208    2e-52
gi|333918171|ref|YP_004491752.1|  30S ribosomal protein S13 [Amyc...   208    2e-52
gi|154507839|ref|ZP_02043481.1|  hypothetical protein ACTODO_0032...   206    6e-52
gi|320094555|ref|ZP_08026321.1|  ribosomal protein S13p/S18e [Act...   206    1e-51
gi|269796229|ref|YP_003315684.1|  30S ribosomal protein S13P [San...   206    1e-51
gi|261338255|ref|ZP_05966139.1|  30S ribosomal protein S13 [Bifid...   205    2e-51
gi|238061097|ref|ZP_04605806.1|  30S ribosomal protein S13 [Micro...   204    3e-51
gi|54022801|ref|YP_117043.1|  30S ribosomal protein S13 [Nocardia...   204    4e-51
gi|330470147|ref|YP_004407890.1|  30S ribosomal protein S13 [Verr...   203    6e-51
gi|227494570|ref|ZP_03924886.1|  ribosomal protein S13 [Actinomyc...   203    8e-51
gi|291457227|ref|ZP_06596617.1|  30S ribosomal protein S13 [Bifid...   202    1e-50
gi|269218965|ref|ZP_06162819.1|  30S ribosomal protein S13 [Actin...   202    1e-50
gi|220913402|ref|YP_002488711.1|  30S ribosomal protein S13 [Arth...   202    1e-50
gi|258651409|ref|YP_003200565.1|  30S ribosomal protein S13 [Naka...   202    1e-50
gi|296454846|ref|YP_003661990.1|  30S ribosomal protein S13 [Bifi...   202    2e-50
gi|23466154|ref|NP_696757.1|  30S ribosomal protein S13 [Bifidoba...   202    2e-50
gi|302869945|ref|YP_003838582.1|  30S ribosomal protein S13 [Micr...   202    2e-50
gi|333109704|gb|AEF26720.1|  30S ribosomal protein S13 [Bifidobac...   202    2e-50
gi|319948698|ref|ZP_08022819.1|  30S ribosomal protein S13 [Dietz...   201    2e-50
gi|229818216|ref|ZP_04448498.1|  hypothetical protein BIFANG_0351...   201    2e-50
gi|334336211|ref|YP_004541363.1|  30S ribosomal protein S13 [Isop...   201    2e-50
gi|152964682|ref|YP_001360466.1|  30S ribosomal protein S13 [Kine...   201    2e-50
gi|315225999|ref|ZP_07867787.1|  ribosomal protein S13p/S18e [Par...   201    2e-50
gi|213693064|ref|YP_002323650.1|  ribosomal protein S13 [Bifidoba...   201    3e-50
gi|294786436|ref|ZP_06751690.1|  30S ribosomal protein S13 [Paras...   201    3e-50
gi|331699148|ref|YP_004335387.1|  30S ribosomal protein S13 [Pseu...   201    4e-50
gi|227497206|ref|ZP_03927454.1|  ribosomal protein S13 [Actinomyc...   201    4e-50
gi|298345437|ref|YP_003718124.1|  30S ribosomal protein S13 [Mobi...   201    4e-50


>gi|15610596|ref|NP_217977.1| 30S ribosomal protein S13 [Mycobacterium tuberculosis H37Rv]
 gi|15843055|ref|NP_338092.1| 30S ribosomal protein S13 [Mycobacterium tuberculosis CDC1551]
 gi|31794636|ref|NP_857129.1| 30S ribosomal protein S13 [Mycobacterium bovis AF2122/97]
 78 more sequence titles
 
gi|121639380|ref|YP_979604.1| 30S ribosomal protein S13 [Mycobacterium bovis BCG str. Pasteur 
1173P2]
 gi|148663325|ref|YP_001284848.1| 30S ribosomal protein S13 [Mycobacterium tuberculosis H37Ra]
 gi|148824670|ref|YP_001289424.1| 30S ribosomal protein S13 [Mycobacterium tuberculosis F11]
 gi|167966773|ref|ZP_02549050.1| 30S ribosomal protein S13 [Mycobacterium tuberculosis H37Ra]
 gi|224991876|ref|YP_002646565.1| 30S ribosomal protein S13 [Mycobacterium bovis BCG str. Tokyo 
172]
 gi|253800505|ref|YP_003033506.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis KZN 
1435]
 gi|254234052|ref|ZP_04927377.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis C]
 gi|254366061|ref|ZP_04982106.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis str. 
Haarlem]
 gi|254552563|ref|ZP_05143010.1| 30S ribosomal protein S13 [Mycobacterium tuberculosis '98-R604 
INH-RIF-EM']
 gi|289445060|ref|ZP_06434804.1| SSU ribosomal protein S13 [Mycobacterium tuberculosis T46]
 gi|289449164|ref|ZP_06438908.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis CPHL_A]
 gi|289555731|ref|ZP_06444941.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis KZN 
605]
 gi|289576196|ref|ZP_06456423.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis K85]
 gi|289747293|ref|ZP_06506671.1| 30S ribosomal protein S13 [Mycobacterium tuberculosis 02_1987]
 gi|289752184|ref|ZP_06511562.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis T92]
 gi|289763642|ref|ZP_06523020.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis GM 
1503]
 gi|294995766|ref|ZP_06801457.1| 30S ribosomal protein S13 [Mycobacterium tuberculosis 210]
 gi|297636119|ref|ZP_06953899.1| 30S ribosomal protein S13 [Mycobacterium tuberculosis KZN 4207]
 gi|297733119|ref|ZP_06962237.1| 30S ribosomal protein S13 [Mycobacterium tuberculosis KZN R506]
 gi|298526944|ref|ZP_07014353.1| 30S ribosomal protein S13 [Mycobacterium tuberculosis 94_M4241A]
 gi|306777808|ref|ZP_07416145.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis SUMu001]
 gi|306782526|ref|ZP_07420863.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis SUMu002]
 gi|306786345|ref|ZP_07424667.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis SUMu003]
 gi|306790714|ref|ZP_07429036.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis SUMu004]
 gi|306795243|ref|ZP_07433545.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis SUMu005]
 gi|306799432|ref|ZP_07437734.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis SUMu006]
 gi|306805279|ref|ZP_07441947.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis SUMu008]
 gi|306809464|ref|ZP_07446132.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis SUMu007]
 gi|306969572|ref|ZP_07482233.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis SUMu009]
 gi|306973926|ref|ZP_07486587.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis SUMu010]
 gi|307081635|ref|ZP_07490805.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis SUMu011]
 gi|307086241|ref|ZP_07495354.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis SUMu012]
 gi|313660450|ref|ZP_07817330.1| 30S ribosomal protein S13 [Mycobacterium tuberculosis KZN V2475]
 gi|339633465|ref|YP_004725107.1| 30S ribosomal protein S13 [Mycobacterium africanum GM041182]
 gi|340628431|ref|YP_004746883.1| putative 30S ribosomal protein S13 RPSM [Mycobacterium canettii 
CIPT 140010059]
 gi|6094153|sp|O06327.1|RS13_MYCTU RecName: Full=30S ribosomal protein S13
 gi|38605717|sp|P45813.2|RS13_MYCBO RecName: Full=30S ribosomal protein S13
 gi|158706248|sp|A1KPE6.1|RS13_MYCBP RecName: Full=30S ribosomal protein S13
 gi|158706252|sp|A5U8D6.1|RS13_MYCTA RecName: Full=30S ribosomal protein S13
 gi|254811157|sp|C1AHR8.1|RS13_MYCBT RecName: Full=30S ribosomal protein S13
 gi|2104383|emb|CAB08726.1| PROBABLE 30S RIBOSOMAL PROTEIN S13 RPSM [Mycobacterium tuberculosis 
H37Rv]
 gi|13883399|gb|AAK47906.1| ribosomal protein S13 [Mycobacterium tuberculosis CDC1551]
 gi|31620233|emb|CAD95676.1| PROBABLE 30S RIBOSOMAL PROTEIN S13 RPSM [Mycobacterium bovis 
AF2122/97]
 gi|121495028|emb|CAL73514.1| Probable 30S ribosomal protein S13 rpsM [Mycobacterium bovis 
BCG str. Pasteur 1173P2]
 gi|124599581|gb|EAY58685.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis C]
 gi|134151574|gb|EBA43619.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis str. 
Haarlem]
 gi|148507477|gb|ABQ75286.1| 30S ribosomal protein S13 [Mycobacterium tuberculosis H37Ra]
 gi|148723197|gb|ABR07822.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis F11]
 gi|224774991|dbj|BAH27797.1| 30S ribosomal protein S13 [Mycobacterium bovis BCG str. Tokyo 
172]
 gi|253322008|gb|ACT26611.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis KZN 
1435]
 gi|289417979|gb|EFD15219.1| SSU ribosomal protein S13 [Mycobacterium tuberculosis T46]
 gi|289422122|gb|EFD19323.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis CPHL_A]
 gi|289440363|gb|EFD22856.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis KZN 
605]
 gi|289540627|gb|EFD45205.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis K85]
 gi|289687821|gb|EFD55309.1| 30S ribosomal protein S13 [Mycobacterium tuberculosis 02_1987]
 gi|289692771|gb|EFD60200.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis T92]
 gi|289711148|gb|EFD75164.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis GM 
1503]
 gi|298496738|gb|EFI32032.1| 30S ribosomal protein S13 [Mycobacterium tuberculosis 94_M4241A]
 gi|308213892|gb|EFO73291.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis SUMu001]
 gi|308324843|gb|EFP13694.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis SUMu002]
 gi|308329097|gb|EFP17948.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis SUMu003]
 gi|308332905|gb|EFP21756.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis SUMu004]
 gi|308336565|gb|EFP25416.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis SUMu005]
 gi|308340440|gb|EFP29291.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis SUMu006]
 gi|308344304|gb|EFP33155.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis SUMu007]
 gi|308348195|gb|EFP37046.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis SUMu008]
 gi|308352919|gb|EFP41770.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis SUMu009]
 gi|308356762|gb|EFP45613.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis SUMu010]
 gi|308360707|gb|EFP49558.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis SUMu011]
 gi|308364322|gb|EFP53173.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis SUMu012]
 gi|323717944|gb|EGB27133.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis CDC1551A]
 gi|326905306|gb|EGE52239.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis W-148]
 gi|328460236|gb|AEB05659.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis KZN 
4207]
 gi|339299886|gb|AEJ51996.1| 30S ribosomal protein S13 [Mycobacterium tuberculosis CCDC5180]
 gi|339332821|emb|CCC28544.1| putative 30S ribosomal protein S13 RPSM [Mycobacterium africanum 
GM041182]
 gi|340006621|emb|CCC45808.1| putative 30S ribosomal protein S13 RPSM [Mycobacterium canettii 
CIPT 140010059]
 gi|341603401|emb|CCC66082.1| probable 30S ribosomal protein S13 rpsM [Mycobacterium bovis 
BCG str. Moreau RDJ]
 gi|344221296|gb|AEN01927.1| 30S ribosomal protein S13 [Mycobacterium tuberculosis CTRI-2]
Length=124

 Score =  246 bits (627),  Expect = 1e-63, Method: Compositional matrix adjust.
 Identities = 124/124 (100%), Positives = 124/124 (100%), Gaps = 0/124 (0%)

Query  1    MARLVGVDLPRDKRMEVALTYIFGIGRTRSNEILAATGIDRDLRTRDLTEEQLIHLRDYI  60
            MARLVGVDLPRDKRMEVALTYIFGIGRTRSNEILAATGIDRDLRTRDLTEEQLIHLRDYI
Sbjct  1    MARLVGVDLPRDKRMEVALTYIFGIGRTRSNEILAATGIDRDLRTRDLTEEQLIHLRDYI  60

Query  61   EANLKVEGDLRREVQADIRRKIEIGCYQGLRHRRGMPVRGQRTKTNARTRKGPKRTIAGK  120
            EANLKVEGDLRREVQADIRRKIEIGCYQGLRHRRGMPVRGQRTKTNARTRKGPKRTIAGK
Sbjct  61   EANLKVEGDLRREVQADIRRKIEIGCYQGLRHRRGMPVRGQRTKTNARTRKGPKRTIAGK  120

Query  121  KKAR  124
            KKAR
Sbjct  121  KKAR  124


>gi|289755593|ref|ZP_06514971.1| 30S ribosomal protein S13 [Mycobacterium tuberculosis EAS054]
 gi|289696180|gb|EFD63609.1| 30S ribosomal protein S13 [Mycobacterium tuberculosis EAS054]
Length=124

 Score =  243 bits (621),  Expect = 5e-63, Method: Compositional matrix adjust.
 Identities = 123/124 (99%), Positives = 124/124 (100%), Gaps = 0/124 (0%)

Query  1    MARLVGVDLPRDKRMEVALTYIFGIGRTRSNEILAATGIDRDLRTRDLTEEQLIHLRDYI  60
            MARLVGVDLPRDKRMEVALTYIFGIGRTRSNEILAATGIDRDLRTRDLTEEQLIHLRDYI
Sbjct  1    MARLVGVDLPRDKRMEVALTYIFGIGRTRSNEILAATGIDRDLRTRDLTEEQLIHLRDYI  60

Query  61   EANLKVEGDLRREVQADIRRKIEIGCYQGLRHRRGMPVRGQRTKTNARTRKGPKRTIAGK  120
            EA+LKVEGDLRREVQADIRRKIEIGCYQGLRHRRGMPVRGQRTKTNARTRKGPKRTIAGK
Sbjct  61   EADLKVEGDLRREVQADIRRKIEIGCYQGLRHRRGMPVRGQRTKTNARTRKGPKRTIAGK  120

Query  121  KKAR  124
            KKAR
Sbjct  121  KKAR  124


>gi|296168682|ref|ZP_06850431.1| 30S ribosomal protein S13 [Mycobacterium parascrofulaceum ATCC 
BAA-614]
 gi|295896591|gb|EFG76232.1| 30S ribosomal protein S13 [Mycobacterium parascrofulaceum ATCC 
BAA-614]
Length=124

 Score =  237 bits (605),  Expect = 4e-61, Method: Compositional matrix adjust.
 Identities = 117/124 (95%), Positives = 123/124 (99%), Gaps = 0/124 (0%)

Query  1    MARLVGVDLPRDKRMEVALTYIFGIGRTRSNEILAATGIDRDLRTRDLTEEQLIHLRDYI  60
            MARLVGVDLPRDKRME+ALTYIFG+GRTRSNEILAATGID+DLRTRDLT++QL HLRDYI
Sbjct  1    MARLVGVDLPRDKRMEIALTYIFGVGRTRSNEILAATGIDKDLRTRDLTDDQLTHLRDYI  60

Query  61   EANLKVEGDLRREVQADIRRKIEIGCYQGLRHRRGMPVRGQRTKTNARTRKGPKRTIAGK  120
            EANLKVEGDLRREVQADIRRKIEIGCYQGLRHRRG+PVRGQRTKTNARTRKGPKRTIAGK
Sbjct  61   EANLKVEGDLRREVQADIRRKIEIGCYQGLRHRRGLPVRGQRTKTNARTRKGPKRTIAGK  120

Query  121  KKAR  124
            KKAR
Sbjct  121  KKAR  124


>gi|240167780|ref|ZP_04746439.1| 30S ribosomal protein S13 [Mycobacterium kansasii ATCC 12478]
Length=124

 Score =  237 bits (604),  Expect = 5e-61, Method: Compositional matrix adjust.
 Identities = 118/124 (96%), Positives = 123/124 (99%), Gaps = 0/124 (0%)

Query  1    MARLVGVDLPRDKRMEVALTYIFGIGRTRSNEILAATGIDRDLRTRDLTEEQLIHLRDYI  60
            MARLVGVDLPRDKRMEVALTYI+GIGRTRSNEILAATGIDRDLRTRDLT++QL HLRDYI
Sbjct  1    MARLVGVDLPRDKRMEVALTYIYGIGRTRSNEILAATGIDRDLRTRDLTDDQLTHLRDYI  60

Query  61   EANLKVEGDLRREVQADIRRKIEIGCYQGLRHRRGMPVRGQRTKTNARTRKGPKRTIAGK  120
            EANLK+EGDLRREVQADIRRKIEIGCYQGLRHRRG+PVRGQRTKTNARTRKGPKRTIAGK
Sbjct  61   EANLKIEGDLRREVQADIRRKIEIGCYQGLRHRRGLPVRGQRTKTNARTRKGPKRTIAGK  120

Query  121  KKAR  124
            KKAR
Sbjct  121  KKAR  124


>gi|342861866|ref|ZP_08718511.1| 30S ribosomal protein S13 [Mycobacterium colombiense CECT 3035]
 gi|342130683|gb|EGT83987.1| 30S ribosomal protein S13 [Mycobacterium colombiense CECT 3035]
Length=124

 Score =  236 bits (603),  Expect = 6e-61, Method: Compositional matrix adjust.
 Identities = 117/124 (95%), Positives = 123/124 (99%), Gaps = 0/124 (0%)

Query  1    MARLVGVDLPRDKRMEVALTYIFGIGRTRSNEILAATGIDRDLRTRDLTEEQLIHLRDYI  60
            MARLVGVDLPRDKRME+ALTYIFG+GRTRSNEILAATGIDR+LRTRDLT++QL HLRDYI
Sbjct  1    MARLVGVDLPRDKRMEIALTYIFGVGRTRSNEILAATGIDRNLRTRDLTDDQLTHLRDYI  60

Query  61   EANLKVEGDLRREVQADIRRKIEIGCYQGLRHRRGMPVRGQRTKTNARTRKGPKRTIAGK  120
            EANLKVEGDLRREVQADIRRKIEIGCYQGLRHRRG+PVRGQRTKTNARTRKGPKRTIAGK
Sbjct  61   EANLKVEGDLRREVQADIRRKIEIGCYQGLRHRRGLPVRGQRTKTNARTRKGPKRTIAGK  120

Query  121  KKAR  124
            KKAR
Sbjct  121  KKAR  124


>gi|41410328|ref|NP_963164.1| 30S ribosomal protein S13 [Mycobacterium avium subsp. paratuberculosis 
K-10]
 gi|254776833|ref|ZP_05218349.1| 30S ribosomal protein S13 [Mycobacterium avium subsp. avium ATCC 
25291]
 gi|81412936|sp|Q73S46.1|RS13_MYCPA RecName: Full=30S ribosomal protein S13
 gi|158706370|sp|A0QKU8.2|RS13_MYCA1 RecName: Full=30S ribosomal protein S13
 gi|41399162|gb|AAS06780.1| RpsM [Mycobacterium avium subsp. paratuberculosis K-10]
 gi|336460707|gb|EGO39597.1| 30S ribosomal protein S13 [Mycobacterium avium subsp. paratuberculosis 
S397]
Length=124

 Score =  236 bits (603),  Expect = 6e-61, Method: Compositional matrix adjust.
 Identities = 117/124 (95%), Positives = 123/124 (99%), Gaps = 0/124 (0%)

Query  1    MARLVGVDLPRDKRMEVALTYIFGIGRTRSNEILAATGIDRDLRTRDLTEEQLIHLRDYI  60
            MARLVGVDLPRDKRME+ALTYI+G+GRTRSNEILAATGIDRDLRTRDLT++QL HLRDYI
Sbjct  1    MARLVGVDLPRDKRMEIALTYIYGVGRTRSNEILAATGIDRDLRTRDLTDDQLTHLRDYI  60

Query  61   EANLKVEGDLRREVQADIRRKIEIGCYQGLRHRRGMPVRGQRTKTNARTRKGPKRTIAGK  120
            EANLKVEGDLRREVQADIRRKIEIGCYQGLRHRRG+PVRGQRTKTNARTRKGPKRTIAGK
Sbjct  61   EANLKVEGDLRREVQADIRRKIEIGCYQGLRHRRGLPVRGQRTKTNARTRKGPKRTIAGK  120

Query  121  KKAR  124
            KKAR
Sbjct  121  KKAR  124


>gi|118616622|ref|YP_904954.1| 30S ribosomal protein S13 [Mycobacterium ulcerans Agy99]
 gi|183981107|ref|YP_001849398.1| 30S ribosomal protein S13, RpsM [Mycobacterium marinum M]
 gi|158706253|sp|A0PMB4.1|RS13_MYCUA RecName: Full=30S ribosomal protein S13
 gi|226712767|sp|B2HCX1.1|RS13_MYCMM RecName: Full=30S ribosomal protein S13
 gi|118568732|gb|ABL03483.1| 30S ribosomal protein S13, RpsM [Mycobacterium ulcerans Agy99]
 gi|183174433|gb|ACC39543.1| 30S ribosomal protein S13, RpsM [Mycobacterium marinum M]
Length=124

 Score =  234 bits (598),  Expect = 3e-60, Method: Compositional matrix adjust.
 Identities = 115/124 (93%), Positives = 123/124 (99%), Gaps = 0/124 (0%)

Query  1    MARLVGVDLPRDKRMEVALTYIFGIGRTRSNEILAATGIDRDLRTRDLTEEQLIHLRDYI  60
            MARLVGVDLPRDKRME+ALTYI+G+GRTRSNEILAATGIDR+LRTRDLT++QL HLRDYI
Sbjct  1    MARLVGVDLPRDKRMEIALTYIYGVGRTRSNEILAATGIDRNLRTRDLTDDQLTHLRDYI  60

Query  61   EANLKVEGDLRREVQADIRRKIEIGCYQGLRHRRGMPVRGQRTKTNARTRKGPKRTIAGK  120
            EANLK+EGDLRREVQADIRRKIEIGCYQGLRHRRG+PVRGQRTKTNARTRKGPKRTIAGK
Sbjct  61   EANLKIEGDLRREVQADIRRKIEIGCYQGLRHRRGLPVRGQRTKTNARTRKGPKRTIAGK  120

Query  121  KKAR  124
            KKAR
Sbjct  121  KKAR  124


>gi|254819218|ref|ZP_05224219.1| 30S ribosomal protein S13 [Mycobacterium intracellulare ATCC 
13950]
Length=124

 Score =  234 bits (596),  Expect = 4e-60, Method: Compositional matrix adjust.
 Identities = 115/124 (93%), Positives = 122/124 (99%), Gaps = 0/124 (0%)

Query  1    MARLVGVDLPRDKRMEVALTYIFGIGRTRSNEILAATGIDRDLRTRDLTEEQLIHLRDYI  60
            MARLVGVDLPRDKRME+ALTYIFG+GRTRSNEIL ATGID++LRTRDLT++QL HLRDYI
Sbjct  1    MARLVGVDLPRDKRMEIALTYIFGVGRTRSNEILEATGIDKNLRTRDLTDDQLTHLRDYI  60

Query  61   EANLKVEGDLRREVQADIRRKIEIGCYQGLRHRRGMPVRGQRTKTNARTRKGPKRTIAGK  120
            EANLKVEGDLRREVQADIRRKIEIGCYQGLRHRRG+PVRGQRTKTNARTRKGPKRTIAGK
Sbjct  61   EANLKVEGDLRREVQADIRRKIEIGCYQGLRHRRGLPVRGQRTKTNARTRKGPKRTIAGK  120

Query  121  KKAR  124
            KKAR
Sbjct  121  KKAR  124


>gi|15828062|ref|NP_302325.1| 30S ribosomal protein S13 [Mycobacterium leprae TN]
 gi|221230539|ref|YP_002503955.1| 30S ribosomal protein S13 [Mycobacterium leprae Br4923]
 gi|7388130|sp|Q9X7A1.1|RS13_MYCLE RecName: Full=30S ribosomal protein S13
 gi|254811158|sp|B8ZSH9.1|RS13_MYCLB RecName: Full=30S ribosomal protein S13
 gi|4539115|emb|CAB39836.1| putative 30S ribosomal protein S13 [Mycobacterium leprae]
 gi|13093615|emb|CAC30915.1| 30S ribosomal protein S13 [Mycobacterium leprae]
 gi|219933646|emb|CAR72057.1| 30S ribosomal protein S13 [Mycobacterium leprae Br4923]
Length=124

 Score =  232 bits (591),  Expect = 2e-59, Method: Compositional matrix adjust.
 Identities = 115/124 (93%), Positives = 122/124 (99%), Gaps = 0/124 (0%)

Query  1    MARLVGVDLPRDKRMEVALTYIFGIGRTRSNEILAATGIDRDLRTRDLTEEQLIHLRDYI  60
            MARLVGVDLPRDKRMEVALTYI+GIGRTR+NEIL ATGI+RDLRTRDLT++QL HLRDYI
Sbjct  1    MARLVGVDLPRDKRMEVALTYIYGIGRTRANEILEATGIERDLRTRDLTDDQLTHLRDYI  60

Query  61   EANLKVEGDLRREVQADIRRKIEIGCYQGLRHRRGMPVRGQRTKTNARTRKGPKRTIAGK  120
            EANLKVEGDLRREVQADIRRK+EIGCYQGLRHRRG+PVRGQRTKTNARTRKGPKRTIAGK
Sbjct  61   EANLKVEGDLRREVQADIRRKMEIGCYQGLRHRRGLPVRGQRTKTNARTRKGPKRTIAGK  120

Query  121  KKAR  124
            KKAR
Sbjct  121  KKAR  124


>gi|108798082|ref|YP_638279.1| 30S ribosomal protein S13 [Mycobacterium sp. MCS]
 gi|119867178|ref|YP_937130.1| 30S ribosomal protein S13 [Mycobacterium sp. KMS]
 gi|126433742|ref|YP_001069433.1| 30S ribosomal protein S13 [Mycobacterium sp. JLS]
 6 more sequence titles
 
gi|123179360|sp|Q1BD11.1|RS13_MYCSS RecName: Full=30S ribosomal protein S13
 gi|158706250|sp|A3PVL5.1|RS13_MYCSJ RecName: Full=30S ribosomal protein S13
 gi|158706251|sp|A1UBY2.1|RS13_MYCSK RecName: Full=30S ribosomal protein S13
 gi|108768501|gb|ABG07223.1| SSU ribosomal protein S13P [Mycobacterium sp. MCS]
 gi|119693267|gb|ABL90340.1| SSU ribosomal protein S13P [Mycobacterium sp. KMS]
 gi|126233542|gb|ABN96942.1| SSU ribosomal protein S13P [Mycobacterium sp. JLS]
Length=124

 Score =  228 bits (580),  Expect = 3e-58, Method: Compositional matrix adjust.
 Identities = 112/124 (91%), Positives = 120/124 (97%), Gaps = 0/124 (0%)

Query  1    MARLVGVDLPRDKRMEVALTYIFGIGRTRSNEILAATGIDRDLRTRDLTEEQLIHLRDYI  60
            MARLVGVDLPRDKRME+ALTYI+G+GRTRS EIL ATGIDRDLRT+DLT++Q+  LRDYI
Sbjct  1    MARLVGVDLPRDKRMEIALTYIYGVGRTRSQEILEATGIDRDLRTKDLTDDQVTQLRDYI  60

Query  61   EANLKVEGDLRREVQADIRRKIEIGCYQGLRHRRGMPVRGQRTKTNARTRKGPKRTIAGK  120
            EANLKVEGDLRREVQADIRRKIEIGCYQGLRHRRG+PVRGQRTKTNARTRKGPKRTIAGK
Sbjct  61   EANLKVEGDLRREVQADIRRKIEIGCYQGLRHRRGLPVRGQRTKTNARTRKGPKRTIAGK  120

Query  121  KKAR  124
            KKAR
Sbjct  121  KKAR  124


>gi|118473987|ref|YP_885903.1| 30S ribosomal protein S13 [Mycobacterium smegmatis str. MC2 155]
 gi|158706249|sp|A0QSL5.1|RS13_MYCS2 RecName: Full=30S ribosomal protein S13
 gi|118175274|gb|ABK76170.1| ribosomal protein S13p/S18e [Mycobacterium smegmatis str. MC2 
155]
Length=124

 Score =  226 bits (576),  Expect = 1e-57, Method: Compositional matrix adjust.
 Identities = 111/124 (90%), Positives = 121/124 (98%), Gaps = 0/124 (0%)

Query  1    MARLVGVDLPRDKRMEVALTYIFGIGRTRSNEILAATGIDRDLRTRDLTEEQLIHLRDYI  60
            MARLVGVDLPRDKRME+ALTYI+GIGRTRSNEILAATGID+++RT+DLT++Q+  LRDYI
Sbjct  1    MARLVGVDLPRDKRMEIALTYIYGIGRTRSNEILAATGIDKNMRTKDLTDDQVTVLRDYI  60

Query  61   EANLKVEGDLRREVQADIRRKIEIGCYQGLRHRRGMPVRGQRTKTNARTRKGPKRTIAGK  120
            E NLKVEGDLRREVQADIRRKIEIGCYQGLRHRRG+PVRGQRTKTNARTRKGPKRTIAGK
Sbjct  61   EGNLKVEGDLRREVQADIRRKIEIGCYQGLRHRRGLPVRGQRTKTNARTRKGPKRTIAGK  120

Query  121  KKAR  124
            KKAR
Sbjct  121  KKAR  124


>gi|563203|gb|AAB17598.1| ribosomal protein S13 [Mycobacterium bovis]
 gi|1589487|prf||2211287D ribosomal protein S13
Length=123

 Score =  223 bits (568),  Expect = 8e-57, Method: Compositional matrix adjust.
 Identities = 112/114 (99%), Positives = 112/114 (99%), Gaps = 0/114 (0%)

Query  1    MARLVGVDLPRDKRMEVALTYIFGIGRTRSNEILAATGIDRDLRTRDLTEEQLIHLRDYI  60
            M RLVGVDLPR KRMEVALTYIFGIGRTRSNEILAATGIDRDLRTRDLTEEQLIHLRDYI
Sbjct  1    MDRLVGVDLPRHKRMEVALTYIFGIGRTRSNEILAATGIDRDLRTRDLTEEQLIHLRDYI  60

Query  61   EANLKVEGDLRREVQADIRRKIEIGCYQGLRHRRGMPVRGQRTKTNARTRKGPK  114
            EANLKVEGDLRREVQADIRRKIEIGCYQGLRHRRGMPVRGQRTKTNARTRKGPK
Sbjct  61   EANLKVEGDLRREVQADIRRKIEIGCYQGLRHRRGMPVRGQRTKTNARTRKGPK  114


>gi|120402444|ref|YP_952273.1| 30S ribosomal protein S13 [Mycobacterium vanbaalenii PYR-1]
 gi|158706254|sp|A1T517.1|RS13_MYCVP RecName: Full=30S ribosomal protein S13
 gi|119955262|gb|ABM12267.1| SSU ribosomal protein S13P [Mycobacterium vanbaalenii PYR-1]
Length=124

 Score =  222 bits (566),  Expect = 1e-56, Method: Compositional matrix adjust.
 Identities = 109/124 (88%), Positives = 118/124 (96%), Gaps = 0/124 (0%)

Query  1    MARLVGVDLPRDKRMEVALTYIFGIGRTRSNEILAATGIDRDLRTRDLTEEQLIHLRDYI  60
            MARL+GVDLPRDKRME+ALTYI+GIGRTRS EIL ATGI RD+RT+DLT++Q+  LRDYI
Sbjct  1    MARLMGVDLPRDKRMEIALTYIYGIGRTRSQEILEATGISRDMRTKDLTDDQVTQLRDYI  60

Query  61   EANLKVEGDLRREVQADIRRKIEIGCYQGLRHRRGMPVRGQRTKTNARTRKGPKRTIAGK  120
            E NLKVEGDLRREVQADIRRKIEIGCYQGLRHRRG+PVRGQRTKTNARTRKGPKRTIAGK
Sbjct  61   EGNLKVEGDLRREVQADIRRKIEIGCYQGLRHRRGLPVRGQRTKTNARTRKGPKRTIAGK  120

Query  121  KKAR  124
            KKAR
Sbjct  121  KKAR  124


>gi|145225549|ref|YP_001136227.1| 30S ribosomal protein S13 [Mycobacterium gilvum PYR-GCK]
 gi|315445901|ref|YP_004078780.1| 30S ribosomal protein S13P [Mycobacterium sp. Spyr1]
 gi|189044282|sp|A4TEI2.1|RS13_MYCGI RecName: Full=30S ribosomal protein S13
 gi|145218035|gb|ABP47439.1| SSU ribosomal protein S13P [Mycobacterium gilvum PYR-GCK]
 gi|315264204|gb|ADU00946.1| SSU ribosomal protein S13P [Mycobacterium sp. Spyr1]
Length=124

 Score =  219 bits (559),  Expect = 8e-56, Method: Compositional matrix adjust.
 Identities = 108/124 (88%), Positives = 117/124 (95%), Gaps = 0/124 (0%)

Query  1    MARLVGVDLPRDKRMEVALTYIFGIGRTRSNEILAATGIDRDLRTRDLTEEQLIHLRDYI  60
            MARL+GVDLPRDKRME+ALTYI+G+GRTRS EIL ATGI RD RT+DLT++Q+  LRDYI
Sbjct  1    MARLMGVDLPRDKRMEIALTYIYGVGRTRSQEILEATGISRDQRTKDLTDDQVSQLRDYI  60

Query  61   EANLKVEGDLRREVQADIRRKIEIGCYQGLRHRRGMPVRGQRTKTNARTRKGPKRTIAGK  120
            E NLKVEGDLRREVQADIRRKIEIGCYQGLRHRRG+PVRGQRTKTNARTRKGPKRTIAGK
Sbjct  61   EGNLKVEGDLRREVQADIRRKIEIGCYQGLRHRRGLPVRGQRTKTNARTRKGPKRTIAGK  120

Query  121  KKAR  124
            KKAR
Sbjct  121  KKAR  124


>gi|289571694|ref|ZP_06451921.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis T17]
 gi|289545448|gb|EFD49096.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis T17]
Length=110

 Score =  219 bits (557),  Expect = 1e-55, Method: Compositional matrix adjust.
 Identities = 110/110 (100%), Positives = 110/110 (100%), Gaps = 0/110 (0%)

Query  15   MEVALTYIFGIGRTRSNEILAATGIDRDLRTRDLTEEQLIHLRDYIEANLKVEGDLRREV  74
            MEVALTYIFGIGRTRSNEILAATGIDRDLRTRDLTEEQLIHLRDYIEANLKVEGDLRREV
Sbjct  1    MEVALTYIFGIGRTRSNEILAATGIDRDLRTRDLTEEQLIHLRDYIEANLKVEGDLRREV  60

Query  75   QADIRRKIEIGCYQGLRHRRGMPVRGQRTKTNARTRKGPKRTIAGKKKAR  124
            QADIRRKIEIGCYQGLRHRRGMPVRGQRTKTNARTRKGPKRTIAGKKKAR
Sbjct  61   QADIRRKIEIGCYQGLRHRRGMPVRGQRTKTNARTRKGPKRTIAGKKKAR  110


>gi|169630852|ref|YP_001704501.1| 30S ribosomal protein S13 [Mycobacterium abscessus ATCC 19977]
 gi|226712765|sp|B1MGA2.1|RS13_MYCA9 RecName: Full=30S ribosomal protein S13
 gi|169242819|emb|CAM63847.1| 30S ribosomal protein S13 [Mycobacterium abscessus]
Length=124

 Score =  216 bits (551),  Expect = 7e-55, Method: Compositional matrix adjust.
 Identities = 107/124 (87%), Positives = 117/124 (95%), Gaps = 0/124 (0%)

Query  1    MARLVGVDLPRDKRMEVALTYIFGIGRTRSNEILAATGIDRDLRTRDLTEEQLIHLRDYI  60
            MARLVGVDLPRDKRME+ALTYI+GIGRTRS EILAATGI  + R++DLT++Q+  LR+YI
Sbjct  1    MARLVGVDLPRDKRMEIALTYIYGIGRTRSKEILAATGISPEQRSKDLTDDQVTQLREYI  60

Query  61   EANLKVEGDLRREVQADIRRKIEIGCYQGLRHRRGMPVRGQRTKTNARTRKGPKRTIAGK  120
            EA LKVEGDLRREVQADIRRKIEIGCYQGLRHRRG+PVRGQRTKTNARTRKGPKRTIAGK
Sbjct  61   EATLKVEGDLRREVQADIRRKIEIGCYQGLRHRRGLPVRGQRTKTNARTRKGPKRTIAGK  120

Query  121  KKAR  124
            KKAR
Sbjct  121  KKAR  124


>gi|333991923|ref|YP_004524537.1| 30S ribosomal protein S13 RpsM [Mycobacterium sp. JDM601]
 gi|333487891|gb|AEF37283.1| 30S ribosomal protein S13 RpsM [Mycobacterium sp. JDM601]
Length=120

 Score =  215 bits (548),  Expect = 2e-54, Method: Compositional matrix adjust.
 Identities = 106/120 (89%), Positives = 115/120 (96%), Gaps = 0/120 (0%)

Query  5    VGVDLPRDKRMEVALTYIFGIGRTRSNEILAATGIDRDLRTRDLTEEQLIHLRDYIEANL  64
            +GVDLPRDKRME+ALTYI+GIGRTR+ EILAATGID+D R++DLT+EQL  LRDYIE NL
Sbjct  1    MGVDLPRDKRMEIALTYIYGIGRTRAGEILAATGIDKDQRSKDLTDEQLTALRDYIEGNL  60

Query  65   KVEGDLRREVQADIRRKIEIGCYQGLRHRRGMPVRGQRTKTNARTRKGPKRTIAGKKKAR  124
            KVEGDLRREVQADIRRKIEIGCYQGLRHRRG+PVRGQRTKTNARTRKGPKRTIAGKKKAR
Sbjct  61   KVEGDLRREVQADIRRKIEIGCYQGLRHRRGLPVRGQRTKTNARTRKGPKRTIAGKKKAR  120


>gi|296394893|ref|YP_003659777.1| 30S ribosomal protein S13 [Segniliparus rotundus DSM 44985]
 gi|296182040|gb|ADG98946.1| 30S ribosomal protein S13 [Segniliparus rotundus DSM 44985]
Length=124

 Score =  211 bits (536),  Expect = 3e-53, Method: Compositional matrix adjust.
 Identities = 102/124 (83%), Positives = 115/124 (93%), Gaps = 0/124 (0%)

Query  1    MARLVGVDLPRDKRMEVALTYIFGIGRTRSNEILAATGIDRDLRTRDLTEEQLIHLRDYI  60
            MARL GVDLPRDKR+E+ALTYI+GIGRT+S EILAATG+  DLRT+DLT+  +  LR+YI
Sbjct  1    MARLAGVDLPRDKRLEIALTYIYGIGRTKSKEILAATGLSPDLRTKDLTDANVAQLREYI  60

Query  61   EANLKVEGDLRREVQADIRRKIEIGCYQGLRHRRGMPVRGQRTKTNARTRKGPKRTIAGK  120
            E +LKVEGDLRREVQADIRRK+EIGCYQGLRHRRG+PVRGQRTKTNARTRKGPK+TIAGK
Sbjct  61   ENSLKVEGDLRREVQADIRRKVEIGCYQGLRHRRGLPVRGQRTKTNARTRKGPKKTIAGK  120

Query  121  KKAR  124
            KKAR
Sbjct  121  KKAR  124


>gi|111023122|ref|YP_706094.1| 30S ribosomal protein S13 [Rhodococcus jostii RHA1]
 gi|226365621|ref|YP_002783404.1| 30S ribosomal protein S13 [Rhodococcus opacus B4]
 gi|123045552|sp|Q0S3F0.1|RS13_RHOSR RecName: Full=30S ribosomal protein S13
 gi|254811162|sp|C1B038.1|RS13_RHOOB RecName: Full=30S ribosomal protein S13
 gi|110822652|gb|ABG97936.1| 30S ribosomal protein S13 [Rhodococcus jostii RHA1]
 gi|226244111|dbj|BAH54459.1| 30S ribosomal protein S13 [Rhodococcus opacus B4]
Length=124

 Score =  210 bits (535),  Expect = 5e-53, Method: Compositional matrix adjust.
 Identities = 103/124 (84%), Positives = 115/124 (93%), Gaps = 0/124 (0%)

Query  1    MARLVGVDLPRDKRMEVALTYIFGIGRTRSNEILAATGIDRDLRTRDLTEEQLIHLRDYI  60
            MARL GVDLPR+KRME+ALTYI+GIGRTRS EIL ATG+  DLR++DL++E L  LR+YI
Sbjct  1    MARLAGVDLPREKRMEIALTYIYGIGRTRSKEILDATGVSPDLRSKDLSDEDLAKLREYI  60

Query  61   EANLKVEGDLRREVQADIRRKIEIGCYQGLRHRRGMPVRGQRTKTNARTRKGPKRTIAGK  120
            E +LKVEGDLRREVQADIRRKIEIGCYQGLRHRRG+PVRGQRTKTNARTRKGPKRTIAGK
Sbjct  61   EESLKVEGDLRREVQADIRRKIEIGCYQGLRHRRGLPVRGQRTKTNARTRKGPKRTIAGK  120

Query  121  KKAR  124
            KKA+
Sbjct  121  KKAK  124


>gi|226305367|ref|YP_002765325.1| 30S ribosomal protein S13 [Rhodococcus erythropolis PR4]
 gi|229489477|ref|ZP_04383340.1| 30S ribosomal protein S13 [Rhodococcus erythropolis SK121]
 gi|259494688|sp|C0ZW51.1|RS13_RHOE4 RecName: Full=30S ribosomal protein S13
 gi|226184482|dbj|BAH32586.1| 30S ribosomal protein S13 [Rhodococcus erythropolis PR4]
 gi|229323574|gb|EEN89332.1| 30S ribosomal protein S13 [Rhodococcus erythropolis SK121]
Length=124

 Score =  210 bits (534),  Expect = 6e-53, Method: Compositional matrix adjust.
 Identities = 103/124 (84%), Positives = 115/124 (93%), Gaps = 0/124 (0%)

Query  1    MARLVGVDLPRDKRMEVALTYIFGIGRTRSNEILAATGIDRDLRTRDLTEEQLIHLRDYI  60
            MARL GVDLPR+KRME+ALTYI+GIGRTRS EIL ATG+  DLR++DL++E L  LR+YI
Sbjct  1    MARLSGVDLPREKRMEIALTYIYGIGRTRSKEILDATGVSPDLRSKDLSDEDLAKLREYI  60

Query  61   EANLKVEGDLRREVQADIRRKIEIGCYQGLRHRRGMPVRGQRTKTNARTRKGPKRTIAGK  120
            E +LKVEGDLRREVQADIRRKIEIGCYQGLRHRRG+PVRGQRTKTNARTRKGPKRTIAGK
Sbjct  61   EESLKVEGDLRREVQADIRRKIEIGCYQGLRHRRGLPVRGQRTKTNARTRKGPKRTIAGK  120

Query  121  KKAR  124
            KKA+
Sbjct  121  KKAK  124


>gi|118465138|ref|YP_883536.1| 30S ribosomal protein S13 [Mycobacterium avium 104]
 gi|118166425|gb|ABK67322.1| ribosomal protein S13p/S18e [Mycobacterium avium 104]
Length=110

 Score =  210 bits (534),  Expect = 6e-53, Method: Compositional matrix adjust.
 Identities = 103/110 (94%), Positives = 109/110 (99%), Gaps = 0/110 (0%)

Query  15   MEVALTYIFGIGRTRSNEILAATGIDRDLRTRDLTEEQLIHLRDYIEANLKVEGDLRREV  74
            ME+ALTYI+G+GRTRSNEILAATGIDRDLRTRDLT++QL HLRDYIEANLKVEGDLRREV
Sbjct  1    MEIALTYIYGVGRTRSNEILAATGIDRDLRTRDLTDDQLTHLRDYIEANLKVEGDLRREV  60

Query  75   QADIRRKIEIGCYQGLRHRRGMPVRGQRTKTNARTRKGPKRTIAGKKKAR  124
            QADIRRKIEIGCYQGLRHRRG+PVRGQRTKTNARTRKGPKRTIAGKKKAR
Sbjct  61   QADIRRKIEIGCYQGLRHRRGLPVRGQRTKTNARTRKGPKRTIAGKKKAR  110


>gi|312140892|ref|YP_004008228.1| 30S ribosomal protein s13 rpsm [Rhodococcus equi 103S]
 gi|325675470|ref|ZP_08155154.1| 30S ribosomal protein S13 [Rhodococcus equi ATCC 33707]
 gi|311890231|emb|CBH49549.1| 30S ribosomal protein S13 RpsM [Rhodococcus equi 103S]
 gi|325553441|gb|EGD23119.1| 30S ribosomal protein S13 [Rhodococcus equi ATCC 33707]
Length=122

 Score =  208 bits (530),  Expect = 2e-52, Method: Compositional matrix adjust.
 Identities = 101/122 (83%), Positives = 114/122 (94%), Gaps = 0/122 (0%)

Query  1    MARLVGVDLPRDKRMEVALTYIFGIGRTRSNEILAATGIDRDLRTRDLTEEQLIHLRDYI  60
            MARL GVDLPR+KRME+ALTYI+GIGRT S EILAATG++ DLR++DLT+E L  LR+YI
Sbjct  1    MARLAGVDLPREKRMEIALTYIYGIGRTTSKEILAATGVNPDLRSKDLTDEDLAKLREYI  60

Query  61   EANLKVEGDLRREVQADIRRKIEIGCYQGLRHRRGMPVRGQRTKTNARTRKGPKRTIAGK  120
            E ++KVEGDLRREVQADIRRKIEIGCYQGLRHRRG+PVRGQRTKTNARTRKGPKRT+AGK
Sbjct  61   EESVKVEGDLRREVQADIRRKIEIGCYQGLRHRRGLPVRGQRTKTNARTRKGPKRTVAGK  120

Query  121  KK  122
            KK
Sbjct  121  KK  122


>gi|317505826|ref|ZP_07963671.1| 30S ribosomal protein S13 [Segniliparus rugosus ATCC BAA-974]
 gi|316255908|gb|EFV15133.1| 30S ribosomal protein S13 [Segniliparus rugosus ATCC BAA-974]
Length=124

 Score =  208 bits (529),  Expect = 2e-52, Method: Compositional matrix adjust.
 Identities = 102/124 (83%), Positives = 115/124 (93%), Gaps = 0/124 (0%)

Query  1    MARLVGVDLPRDKRMEVALTYIFGIGRTRSNEILAATGIDRDLRTRDLTEEQLIHLRDYI  60
            MARL GVDLPRDKR+E+ALTYI+GIGRT+S EILAATG+  DLRT+DLT+  +  LR+YI
Sbjct  1    MARLAGVDLPRDKRLEIALTYIYGIGRTKSKEILAATGLSPDLRTKDLTDGDVAVLREYI  60

Query  61   EANLKVEGDLRREVQADIRRKIEIGCYQGLRHRRGMPVRGQRTKTNARTRKGPKRTIAGK  120
            E +LKVEGDLRREVQADIRRK+EIGCYQGLRHRRG+PVRGQRTKTNARTRKGPK+TIAGK
Sbjct  61   ENSLKVEGDLRREVQADIRRKVEIGCYQGLRHRRGLPVRGQRTKTNARTRKGPKKTIAGK  120

Query  121  KKAR  124
            KKAR
Sbjct  121  KKAR  124


>gi|333918171|ref|YP_004491752.1| 30S ribosomal protein S13 [Amycolicicoccus subflavus DQS3-9A1]
 gi|333480392|gb|AEF38952.1| 30S ribosomal protein S13 [Amycolicicoccus subflavus DQS3-9A1]
Length=124

 Score =  208 bits (529),  Expect = 2e-52, Method: Compositional matrix adjust.
 Identities = 101/124 (82%), Positives = 114/124 (92%), Gaps = 0/124 (0%)

Query  1    MARLVGVDLPRDKRMEVALTYIFGIGRTRSNEILAATGIDRDLRTRDLTEEQLIHLRDYI  60
            MARLVGVDLPRDKRME+ALTYIFG+GRTRS EIL ATGI  DLRT+DLT++ +  LR+YI
Sbjct  1    MARLVGVDLPRDKRMEIALTYIFGVGRTRSQEILTATGISPDLRTKDLTDDDVAKLREYI  60

Query  61   EANLKVEGDLRREVQADIRRKIEIGCYQGLRHRRGMPVRGQRTKTNARTRKGPKRTIAGK  120
            E + K+EGDLRREVQA+IRRK+EIG YQGLRHRRG+PVRGQRTKTNARTRKGPK+TIAGK
Sbjct  61   EGSFKIEGDLRREVQANIRRKMEIGSYQGLRHRRGLPVRGQRTKTNARTRKGPKKTIAGK  120

Query  121  KKAR  124
            KKAR
Sbjct  121  KKAR  124


>gi|154507839|ref|ZP_02043481.1| hypothetical protein ACTODO_00321 [Actinomyces odontolyticus 
ATCC 17982]
 gi|293190234|ref|ZP_06608730.1| 30S ribosomal protein S13 [Actinomyces odontolyticus F0309]
 gi|315605924|ref|ZP_07880955.1| ribosomal protein S13p/S18e [Actinomyces sp. oral taxon 180 str. 
F0310]
 gi|153797473|gb|EDN79893.1| hypothetical protein ACTODO_00321 [Actinomyces odontolyticus 
ATCC 17982]
 gi|292821050|gb|EFF80003.1| 30S ribosomal protein S13 [Actinomyces odontolyticus F0309]
 gi|315312206|gb|EFU60292.1| ribosomal protein S13p/S18e [Actinomyces sp. oral taxon 180 str. 
F0310]
Length=132

 Score =  206 bits (525),  Expect = 6e-52, Method: Compositional matrix adjust.
 Identities = 98/124 (80%), Positives = 112/124 (91%), Gaps = 0/124 (0%)

Query  1    MARLVGVDLPRDKRMEVALTYIFGIGRTRSNEILAATGIDRDLRTRDLTEEQLIHLRDYI  60
            MAR+ GVDLPR+KR+E+ALTYI+G+GRTR+ E LAATG+  D R +D TEE+L+ LRDYI
Sbjct  9    MARIAGVDLPREKRLEIALTYIYGVGRTRAAETLAATGVSPDTRVKDATEEELVKLRDYI  68

Query  61   EANLKVEGDLRREVQADIRRKIEIGCYQGLRHRRGMPVRGQRTKTNARTRKGPKRTIAGK  120
            EAN KVEGDLRREVQADIRRKIEIG YQGLRHRRG+PV GQRTKTNARTRKGPKRT+AGK
Sbjct  69   EANFKVEGDLRREVQADIRRKIEIGSYQGLRHRRGLPVHGQRTKTNARTRKGPKRTVAGK  128

Query  121  KKAR  124
            KKA+
Sbjct  129  KKAK  132


>gi|320094555|ref|ZP_08026321.1| ribosomal protein S13p/S18e [Actinomyces sp. oral taxon 178 str. 
F0338]
 gi|319978470|gb|EFW10047.1| ribosomal protein S13p/S18e [Actinomyces sp. oral taxon 178 str. 
F0338]
Length=124

 Score =  206 bits (523),  Expect = 1e-51, Method: Compositional matrix adjust.
 Identities = 98/124 (80%), Positives = 112/124 (91%), Gaps = 0/124 (0%)

Query  1    MARLVGVDLPRDKRMEVALTYIFGIGRTRSNEILAATGIDRDLRTRDLTEEQLIHLRDYI  60
            MAR+ GVDLPR+KR+E+ALTYI+G+GRTR+ E LAATG+  D R +D TEE+L+ LRDYI
Sbjct  1    MARIAGVDLPREKRLEIALTYIYGVGRTRAAETLAATGVSPDTRVKDATEEELVKLRDYI  60

Query  61   EANLKVEGDLRREVQADIRRKIEIGCYQGLRHRRGMPVRGQRTKTNARTRKGPKRTIAGK  120
            EAN KVEGDLRREVQADIRRKIEIG YQGLRHRRG+PV GQRTKTNARTRKGPKRT+AGK
Sbjct  61   EANFKVEGDLRREVQADIRRKIEIGSYQGLRHRRGLPVHGQRTKTNARTRKGPKRTVAGK  120

Query  121  KKAR  124
            KKA+
Sbjct  121  KKAK  124


>gi|269796229|ref|YP_003315684.1| 30S ribosomal protein S13P [Sanguibacter keddieii DSM 10542]
 gi|269098414|gb|ACZ22850.1| SSU ribosomal protein S13P [Sanguibacter keddieii DSM 10542]
Length=124

 Score =  206 bits (523),  Expect = 1e-51, Method: Compositional matrix adjust.
 Identities = 97/124 (79%), Positives = 113/124 (92%), Gaps = 0/124 (0%)

Query  1    MARLVGVDLPRDKRMEVALTYIFGIGRTRSNEILAATGIDRDLRTRDLTEEQLIHLRDYI  60
            MARL+GVDLPRDKR+EVALTYIFG+GRTR+ + LAATGI  D+R +DL + +L+ LRDY+
Sbjct  1    MARLIGVDLPRDKRLEVALTYIFGVGRTRAQQTLAATGISPDVRVKDLGDAELVSLRDYL  60

Query  61   EANLKVEGDLRREVQADIRRKIEIGCYQGLRHRRGMPVRGQRTKTNARTRKGPKRTIAGK  120
            E N K+EGDLRREV ADIRRK+EIGCY+GLRHRRG+PVRGQRTKTNARTRKGPKRT+AGK
Sbjct  61   EGNFKLEGDLRREVAADIRRKVEIGCYEGLRHRRGLPVRGQRTKTNARTRKGPKRTVAGK  120

Query  121  KKAR  124
            KKAR
Sbjct  121  KKAR  124


>gi|261338255|ref|ZP_05966139.1| 30S ribosomal protein S13 [Bifidobacterium gallicum DSM 20093]
 gi|270276909|gb|EFA22763.1| 30S ribosomal protein S13 [Bifidobacterium gallicum DSM 20093]
Length=125

 Score =  205 bits (521),  Expect = 2e-51, Method: Compositional matrix adjust.
 Identities = 97/123 (79%), Positives = 112/123 (92%), Gaps = 0/123 (0%)

Query  1    MARLVGVDLPRDKRMEVALTYIFGIGRTRSNEILAATGIDRDLRTRDLTEEQLIHLRDYI  60
            MARL GVD+P DKR+E+ALTYIFG+GRTR+ E LAATGI+ D R +DLT+EQLI LRDY+
Sbjct  1    MARLAGVDIPNDKRIEIALTYIFGVGRTRAKETLAATGINPDTRVKDLTDEQLITLRDYL  60

Query  61   EANLKVEGDLRREVQADIRRKIEIGCYQGLRHRRGMPVRGQRTKTNARTRKGPKRTIAGK  120
            E+N K+EGDLRRE+ ADIRRKI+I CYQGLRHRRG+PVRGQRTKTNARTRKGPKRT+AGK
Sbjct  61   ESNYKIEGDLRREIDADIRRKIQINCYQGLRHRRGLPVRGQRTKTNARTRKGPKRTVAGK  120

Query  121  KKA  123
            KKA
Sbjct  121  KKA  123


>gi|238061097|ref|ZP_04605806.1| 30S ribosomal protein S13 [Micromonospora sp. ATCC 39149]
 gi|237882908|gb|EEP71736.1| 30S ribosomal protein S13 [Micromonospora sp. ATCC 39149]
Length=126

 Score =  204 bits (519),  Expect = 3e-51, Method: Compositional matrix adjust.
 Identities = 99/122 (82%), Positives = 112/122 (92%), Gaps = 0/122 (0%)

Query  1    MARLVGVDLPRDKRMEVALTYIFGIGRTRSNEILAATGIDRDLRTRDLTEEQLIHLRDYI  60
            MARLVGVDLPR+KRME+ALTYIFG+GRTR+ E LAATGI  D R RDLT+E+L+ LRD+I
Sbjct  1    MARLVGVDLPREKRMEIALTYIFGVGRTRALETLAATGISPDKRARDLTDEELVQLRDHI  60

Query  61   EANLKVEGDLRREVQADIRRKIEIGCYQGLRHRRGMPVRGQRTKTNARTRKGPKRTIAGK  120
            EAN KVEGDLRREV ADIRRK+EIGCY G+RHRRG+PVRGQRT+TNARTRKGPKRT+AGK
Sbjct  61   EANYKVEGDLRREVAADIRRKVEIGCYAGIRHRRGLPVRGQRTRTNARTRKGPKRTVAGK  120

Query  121  KK  122
            KK
Sbjct  121  KK  122


>gi|54022801|ref|YP_117043.1| 30S ribosomal protein S13 [Nocardia farcinica IFM 10152]
 gi|81375955|sp|Q5Z1L2.1|RS13_NOCFA RecName: Full=30S ribosomal protein S13
 gi|54014309|dbj|BAD55679.1| putative ribosomal protein S13 [Nocardia farcinica IFM 10152]
Length=123

 Score =  204 bits (519),  Expect = 4e-51, Method: Compositional matrix adjust.
 Identities = 100/123 (82%), Positives = 114/123 (93%), Gaps = 1/123 (0%)

Query  1    MARLVGVDLPRDKRMEVALTYIFGIGRTRSNEILAATGIDRDLRTRDLTEEQLIHLRDYI  60
            MARL+GVDLPR+KRME+ALTYI+GIGRTRS EIL ATG+  DLR++DL+++ L  LRDYI
Sbjct  1    MARLMGVDLPREKRMEIALTYIYGIGRTRSKEILEATGVSPDLRSKDLSDDDLTKLRDYI  60

Query  61   EAN-LKVEGDLRREVQADIRRKIEIGCYQGLRHRRGMPVRGQRTKTNARTRKGPKRTIAG  119
            EA+  KVEGDLRREVQADIRRKIEIGCYQGLRHRRG+PVRGQRTKTNARTRKGPK+T+AG
Sbjct  61   EASEFKVEGDLRREVQADIRRKIEIGCYQGLRHRRGLPVRGQRTKTNARTRKGPKKTVAG  120

Query  120  KKK  122
            KKK
Sbjct  121  KKK  123


>gi|330470147|ref|YP_004407890.1| 30S ribosomal protein S13 [Verrucosispora maris AB-18-032]
 gi|328813118|gb|AEB47290.1| 30S ribosomal protein S13 [Verrucosispora maris AB-18-032]
Length=126

 Score =  203 bits (517),  Expect = 6e-51, Method: Compositional matrix adjust.
 Identities = 98/122 (81%), Positives = 113/122 (93%), Gaps = 0/122 (0%)

Query  1    MARLVGVDLPRDKRMEVALTYIFGIGRTRSNEILAATGIDRDLRTRDLTEEQLIHLRDYI  60
            MARLVGVDLPR+KR+E+ALTYIFG+GRTR+ E LAATGI  D R RDLT+E+L+ LRD+I
Sbjct  1    MARLVGVDLPREKRLEIALTYIFGVGRTRALETLAATGISPDKRARDLTDEELVQLRDHI  60

Query  61   EANLKVEGDLRREVQADIRRKIEIGCYQGLRHRRGMPVRGQRTKTNARTRKGPKRTIAGK  120
            EAN KVEGDLRREV ADIRRK+EIGCY+G+RHRRG+PVRGQRT+TNARTRKGPKRT+AGK
Sbjct  61   EANYKVEGDLRREVAADIRRKVEIGCYEGIRHRRGLPVRGQRTRTNARTRKGPKRTVAGK  120

Query  121  KK  122
            KK
Sbjct  121  KK  122


>gi|227494570|ref|ZP_03924886.1| ribosomal protein S13 [Actinomyces coleocanis DSM 15436]
 gi|226832304|gb|EEH64687.1| ribosomal protein S13 [Actinomyces coleocanis DSM 15436]
Length=122

 Score =  203 bits (516),  Expect = 8e-51, Method: Compositional matrix adjust.
 Identities = 97/122 (80%), Positives = 110/122 (91%), Gaps = 0/122 (0%)

Query  1    MARLVGVDLPRDKRMEVALTYIFGIGRTRSNEILAATGIDRDLRTRDLTEEQLIHLRDYI  60
            MAR+ GVDLPR+KRME+ALTYI+G+GRTR+ E L ATG+  DLR +D TEE L+ LR++I
Sbjct  1    MARIAGVDLPREKRMEIALTYIYGVGRTRAAETLEATGVSPDLRVKDATEEDLVKLREFI  60

Query  61   EANLKVEGDLRREVQADIRRKIEIGCYQGLRHRRGMPVRGQRTKTNARTRKGPKRTIAGK  120
            E N KVEGDLRREVQADIRRKIEIGCYQGLRHRRG+PVRGQRTKTNARTRKGPKRT+AGK
Sbjct  61   EGNYKVEGDLRREVQADIRRKIEIGCYQGLRHRRGLPVRGQRTKTNARTRKGPKRTVAGK  120

Query  121  KK  122
            KK
Sbjct  121  KK  122


>gi|291457227|ref|ZP_06596617.1| 30S ribosomal protein S13 [Bifidobacterium breve DSM 20213]
 gi|291381062|gb|EFE88580.1| 30S ribosomal protein S13 [Bifidobacterium breve DSM 20213]
 gi|339479818|gb|ABE96286.1| SSU ribosomal protein S13P [Bifidobacterium breve UCC2003]
Length=125

 Score =  202 bits (515),  Expect = 1e-50, Method: Compositional matrix adjust.
 Identities = 96/123 (79%), Positives = 112/123 (92%), Gaps = 0/123 (0%)

Query  1    MARLVGVDLPRDKRMEVALTYIFGIGRTRSNEILAATGIDRDLRTRDLTEEQLIHLRDYI  60
            MARL GVD+P +KR+E+ALTYIFG+GRTR+ E LAATGI+ D+R +DLT+EQLI LRDY+
Sbjct  1    MARLAGVDIPNEKRIEIALTYIFGVGRTRAKETLAATGINPDIRVKDLTDEQLITLRDYL  60

Query  61   EANLKVEGDLRREVQADIRRKIEIGCYQGLRHRRGMPVRGQRTKTNARTRKGPKRTIAGK  120
            EAN K+EGDLRREV ADIRRKI+I CYQG RHR+G+PVRGQRTKTNARTRKGPKRT+AGK
Sbjct  61   EANYKIEGDLRREVDADIRRKIQINCYQGQRHRKGLPVRGQRTKTNARTRKGPKRTVAGK  120

Query  121  KKA  123
            KKA
Sbjct  121  KKA  123


>gi|269218965|ref|ZP_06162819.1| 30S ribosomal protein S13 [Actinomyces sp. oral taxon 848 str. 
F0332]
 gi|269212076|gb|EEZ78416.1| 30S ribosomal protein S13 [Actinomyces sp. oral taxon 848 str. 
F0332]
Length=123

 Score =  202 bits (515),  Expect = 1e-50, Method: Compositional matrix adjust.
 Identities = 99/122 (82%), Positives = 111/122 (91%), Gaps = 0/122 (0%)

Query  1    MARLVGVDLPRDKRMEVALTYIFGIGRTRSNEILAATGIDRDLRTRDLTEEQLIHLRDYI  60
            MARL GVDLPR+KR+E+ALTYI+GIGRTRS E LAATGI  D+R RDLTE+QL+ L+ +I
Sbjct  1    MARLSGVDLPREKRVEIALTYIYGIGRTRSAETLAATGISPDVRVRDLTEDQLVALKKHI  60

Query  61   EANLKVEGDLRREVQADIRRKIEIGCYQGLRHRRGMPVRGQRTKTNARTRKGPKRTIAGK  120
            + N KVEGDLRREVQADIRRKIEIGCYQGLRHRRG+PV GQRTKTNARTRKGPKRT+AGK
Sbjct  61   DENYKVEGDLRREVQADIRRKIEIGCYQGLRHRRGLPVHGQRTKTNARTRKGPKRTVAGK  120

Query  121  KK  122
            KK
Sbjct  121  KK  122


>gi|220913402|ref|YP_002488711.1| 30S ribosomal protein S13 [Arthrobacter chlorophenolicus A6]
 gi|325964134|ref|YP_004242040.1| 30S ribosomal protein S13P [Arthrobacter phenanthrenivorans Sphe3]
 gi|254811125|sp|B8HCX6.1|RS13_ARTCA RecName: Full=30S ribosomal protein S13
 gi|219860280|gb|ACL40622.1| ribosomal protein S13 [Arthrobacter chlorophenolicus A6]
 gi|323470221|gb|ADX73906.1| SSU ribosomal protein S13P [Arthrobacter phenanthrenivorans Sphe3]
Length=124

 Score =  202 bits (514),  Expect = 1e-50, Method: Compositional matrix adjust.
 Identities = 95/124 (77%), Positives = 113/124 (92%), Gaps = 0/124 (0%)

Query  1    MARLVGVDLPRDKRMEVALTYIFGIGRTRSNEILAATGIDRDLRTRDLTEEQLIHLRDYI  60
            MARL GVD+PR+KR+E+ALTYI+G+G+TR++E LAATGI  D+R +DLT+ QL+ LRDYI
Sbjct  1    MARLAGVDIPREKRLEIALTYIYGVGKTRAHETLAATGISADVRVKDLTDAQLVELRDYI  60

Query  61   EANLKVEGDLRREVQADIRRKIEIGCYQGLRHRRGMPVRGQRTKTNARTRKGPKRTIAGK  120
            E N KVEGDLRREV ADIRRK+EIG Y+GLRHR+G+PVRGQRTKTNARTRKGPKRT+AGK
Sbjct  61   EGNYKVEGDLRREVAADIRRKVEIGSYEGLRHRKGLPVRGQRTKTNARTRKGPKRTVAGK  120

Query  121  KKAR  124
            KKAR
Sbjct  121  KKAR  124


>gi|258651409|ref|YP_003200565.1| 30S ribosomal protein S13 [Nakamurella multipartita DSM 44233]
 gi|258554634|gb|ACV77576.1| ribosomal protein S13 [Nakamurella multipartita DSM 44233]
Length=125

 Score =  202 bits (514),  Expect = 1e-50, Method: Compositional matrix adjust.
 Identities = 103/125 (83%), Positives = 116/125 (93%), Gaps = 1/125 (0%)

Query  1    MARLVGVDLPRDKRMEVALTYIFGIGRTRSNEILAATGIDRDLRTRDLTEEQLIHLRDYI  60
            MARLVGVDLPRDKRME+ALTYI+GIGRTRS E+LAATGI  DLR++DLT+E ++ LRD I
Sbjct  1    MARLVGVDLPRDKRMEIALTYIYGIGRTRSLELLAATGISPDLRSKDLTDEDVLALRDAI  60

Query  61   EA-NLKVEGDLRREVQADIRRKIEIGCYQGLRHRRGMPVRGQRTKTNARTRKGPKRTIAG  119
            +A +LKVEGDLRREVQADIRRK+EIG YQGLRHRR +PVRGQRTKTNARTRKGPK+TIAG
Sbjct  61   DAADLKVEGDLRREVQADIRRKMEIGSYQGLRHRRHLPVRGQRTKTNARTRKGPKKTIAG  120

Query  120  KKKAR  124
            KKKAR
Sbjct  121  KKKAR  125


>gi|296454846|ref|YP_003661990.1| 30S ribosomal protein S13 [Bifidobacterium longum subsp. longum 
JDM301]
 gi|296184278|gb|ADH01160.1| ribosomal protein S13 [Bifidobacterium longum subsp. longum JDM301]
Length=125

 Score =  202 bits (514),  Expect = 2e-50, Method: Compositional matrix adjust.
 Identities = 96/123 (79%), Positives = 111/123 (91%), Gaps = 0/123 (0%)

Query  1    MARLVGVDLPRDKRMEVALTYIFGIGRTRSNEILAATGIDRDLRTRDLTEEQLIHLRDYI  60
            MARL GVD+P +KR+E+ALTYIFG+GRTR+ E LAATGI  D+R +DLT+EQLI LRDY+
Sbjct  1    MARLAGVDIPNEKRIEIALTYIFGVGRTRTKETLAATGISPDIRVKDLTDEQLITLRDYL  60

Query  61   EANLKVEGDLRREVQADIRRKIEIGCYQGLRHRRGMPVRGQRTKTNARTRKGPKRTIAGK  120
            EAN K+EGDLRREV ADIRRKI+I CYQG RHR+G+PVRGQRTKTNARTRKGPKRT+AGK
Sbjct  61   EANYKIEGDLRREVDADIRRKIQINCYQGQRHRKGLPVRGQRTKTNARTRKGPKRTVAGK  120

Query  121  KKA  123
            KKA
Sbjct  121  KKA  123


>gi|23466154|ref|NP_696757.1| 30S ribosomal protein S13 [Bifidobacterium longum NCC2705]
 gi|46190440|ref|ZP_00121530.2| COG0099: Ribosomal protein S13 [Bifidobacterium longum DJO10A]
 gi|189440593|ref|YP_001955674.1| 30S ribosomal protein S13 [Bifidobacterium longum DJO10A]
 18 more sequence titles
 
gi|227546500|ref|ZP_03976549.1| ribosomal protein S13 [Bifidobacterium longum subsp. infantis 
ATCC 55813]
 gi|239621034|ref|ZP_04664065.1| 30S ribosomal protein S13 [Bifidobacterium longum subsp. infantis 
CCUG 52486]
 gi|312133898|ref|YP_004001237.1| rpsm [Bifidobacterium longum subsp. longum BBMN68]
 gi|317483426|ref|ZP_07942416.1| 30S ribosomal protein S13 [Bifidobacterium sp. 12_1_47BFAA]
 gi|322689905|ref|YP_004209639.1| 30S ribosomal protein S13 [Bifidobacterium longum subsp. infantis 
157F]
 gi|322691846|ref|YP_004221416.1| 30S ribosomal protein S13 [Bifidobacterium longum subsp. longum 
JCM 1217]
 gi|32363330|sp|Q8G3Z5.1|RS13_BIFLO RecName: Full=30S ribosomal protein S13
 gi|226712697|sp|B3DQD8.1|RS13_BIFLD RecName: Full=30S ribosomal protein S13
 gi|23326891|gb|AAN25393.1| 30S ribosomal protein S13 [Bifidobacterium longum NCC2705]
 gi|189429028|gb|ACD99176.1| Ribosomal protein S13 [Bifidobacterium longum DJO10A]
 gi|227213049|gb|EEI80928.1| ribosomal protein S13 [Bifidobacterium longum subsp. infantis 
ATCC 55813]
 gi|239516135|gb|EEQ56002.1| 30S ribosomal protein S13 [Bifidobacterium longum subsp. infantis 
CCUG 52486]
 gi|291516447|emb|CBK70063.1| SSU ribosomal protein S13P [Bifidobacterium longum subsp. longum 
F8]
 gi|311773192|gb|ADQ02680.1| RpsM [Bifidobacterium longum subsp. longum BBMN68]
 gi|316915112|gb|EFV36544.1| 30S ribosomal protein S13 [Bifidobacterium sp. 12_1_47BFAA]
 gi|320456702|dbj|BAJ67324.1| 30S ribosomal protein S13 [Bifidobacterium longum subsp. longum 
JCM 1217]
 gi|320461241|dbj|BAJ71861.1| 30S ribosomal protein S13 [Bifidobacterium longum subsp. infantis 
157F]
 gi|338753792|gb|AEI96781.1| 30S ribosomal protein S13 [Bifidobacterium longum subsp. longum 
KACC 91563]
Length=125

 Score =  202 bits (513),  Expect = 2e-50, Method: Compositional matrix adjust.
 Identities = 96/123 (79%), Positives = 111/123 (91%), Gaps = 0/123 (0%)

Query  1    MARLVGVDLPRDKRMEVALTYIFGIGRTRSNEILAATGIDRDLRTRDLTEEQLIHLRDYI  60
            MARL GVD+P +KR+E+ALTYIFG+GRTR+ E LAATGI  D+R +DLT+EQLI LRDY+
Sbjct  1    MARLAGVDIPNEKRIEIALTYIFGVGRTRAKETLAATGISPDIRVKDLTDEQLITLRDYL  60

Query  61   EANLKVEGDLRREVQADIRRKIEIGCYQGLRHRRGMPVRGQRTKTNARTRKGPKRTIAGK  120
            EAN K+EGDLRREV ADIRRKI+I CYQG RHR+G+PVRGQRTKTNARTRKGPKRT+AGK
Sbjct  61   EANYKIEGDLRREVDADIRRKIQINCYQGQRHRKGLPVRGQRTKTNARTRKGPKRTVAGK  120

Query  121  KKA  123
            KKA
Sbjct  121  KKA  123


>gi|302869945|ref|YP_003838582.1| 30S ribosomal protein S13 [Micromonospora aurantiaca ATCC 27029]
 gi|302572804|gb|ADL49006.1| 30S ribosomal protein S13 [Micromonospora aurantiaca ATCC 27029]
Length=126

 Score =  202 bits (513),  Expect = 2e-50, Method: Compositional matrix adjust.
 Identities = 98/122 (81%), Positives = 111/122 (91%), Gaps = 0/122 (0%)

Query  1    MARLVGVDLPRDKRMEVALTYIFGIGRTRSNEILAATGIDRDLRTRDLTEEQLIHLRDYI  60
            MARLVGVDLPR+KRME+ALTYIFG+GRTR+ E LAATGI  D R RDLT+E+L+ LR++I
Sbjct  1    MARLVGVDLPREKRMEIALTYIFGVGRTRALETLAATGISPDKRVRDLTDEELVELRNHI  60

Query  61   EANLKVEGDLRREVQADIRRKIEIGCYQGLRHRRGMPVRGQRTKTNARTRKGPKRTIAGK  120
            E N KVEGDLRREV ADIRRK+EIGCY G+RHRRG+PVRGQRTKTNARTRKGPKRT+AGK
Sbjct  61   EGNYKVEGDLRREVAADIRRKVEIGCYAGIRHRRGLPVRGQRTKTNARTRKGPKRTVAGK  120

Query  121  KK  122
            KK
Sbjct  121  KK  122


>gi|333109704|gb|AEF26720.1| 30S ribosomal protein S13 [Bifidobacterium breve ACS-071-V-Sch8b]
Length=125

 Score =  202 bits (513),  Expect = 2e-50, Method: Compositional matrix adjust.
 Identities = 95/123 (78%), Positives = 112/123 (92%), Gaps = 0/123 (0%)

Query  1    MARLVGVDLPRDKRMEVALTYIFGIGRTRSNEILAATGIDRDLRTRDLTEEQLIHLRDYI  60
            MARL GVD+P +KR+E+ALTYIFG+GRTR+ E LAATGI+ D+R +DLT+EQLI LRDY+
Sbjct  1    MARLAGVDIPNEKRIEIALTYIFGVGRTRAKETLAATGINPDIRVKDLTDEQLITLRDYL  60

Query  61   EANLKVEGDLRREVQADIRRKIEIGCYQGLRHRRGMPVRGQRTKTNARTRKGPKRTIAGK  120
            EAN K+EGDLRRE+ ADIRRKI+I CYQG RHR+G+PVRGQRTKTNARTRKGPKRT+AGK
Sbjct  61   EANYKIEGDLRREIDADIRRKIQINCYQGQRHRKGLPVRGQRTKTNARTRKGPKRTVAGK  120

Query  121  KKA  123
            KKA
Sbjct  121  KKA  123


>gi|319948698|ref|ZP_08022819.1| 30S ribosomal protein S13 [Dietzia cinnamea P4]
 gi|319437600|gb|EFV92599.1| 30S ribosomal protein S13 [Dietzia cinnamea P4]
Length=122

 Score =  201 bits (512),  Expect = 2e-50, Method: Compositional matrix adjust.
 Identities = 102/122 (84%), Positives = 109/122 (90%), Gaps = 0/122 (0%)

Query  1    MARLVGVDLPRDKRMEVALTYIFGIGRTRSNEILAATGIDRDLRTRDLTEEQLIHLRDYI  60
            MARL GVDLPRDKRME+ALTYIFGIGRTRS EIL  TGI  DLRT+DLT+EQL  LRD I
Sbjct  1    MARLAGVDLPRDKRMEIALTYIFGIGRTRSLEILERTGISPDLRTKDLTDEQLTVLRDDI  60

Query  61   EANLKVEGDLRREVQADIRRKIEIGCYQGLRHRRGMPVRGQRTKTNARTRKGPKRTIAGK  120
            E N KVEGDLRRE+Q DIRRKIEIG YQGLRHRRG+PVRGQRTKTNARTRKGPK+T+AGK
Sbjct  61   EGNYKVEGDLRREIQGDIRRKIEIGSYQGLRHRRGLPVRGQRTKTNARTRKGPKKTVAGK  120

Query  121  KK  122
            KK
Sbjct  121  KK  122


>gi|229818216|ref|ZP_04448498.1| hypothetical protein BIFANG_03514 [Bifidobacterium angulatum 
DSM 20098]
 gi|229784467|gb|EEP20581.1| hypothetical protein BIFANG_03514 [Bifidobacterium angulatum 
DSM 20098]
Length=125

 Score =  201 bits (512),  Expect = 2e-50, Method: Compositional matrix adjust.
 Identities = 94/123 (77%), Positives = 112/123 (92%), Gaps = 0/123 (0%)

Query  1    MARLVGVDLPRDKRMEVALTYIFGIGRTRSNEILAATGIDRDLRTRDLTEEQLIHLRDYI  60
            MARL GVD+P +KR+E+ALTYIFG+GRTR+ + LAATGI+ D+R +DLT+EQLI LRDY+
Sbjct  1    MARLAGVDIPNEKRIEIALTYIFGVGRTRAKQTLAATGINPDIRVKDLTDEQLITLRDYL  60

Query  61   EANLKVEGDLRREVQADIRRKIEIGCYQGLRHRRGMPVRGQRTKTNARTRKGPKRTIAGK  120
            EAN K+EGDLRRE+ ADIRRKI+I CYQG RHR+G+PVRGQRTKTNARTRKGPKRT+AGK
Sbjct  61   EANFKIEGDLRREIDADIRRKIQINCYQGQRHRKGLPVRGQRTKTNARTRKGPKRTVAGK  120

Query  121  KKA  123
            KKA
Sbjct  121  KKA  123


>gi|334336211|ref|YP_004541363.1| 30S ribosomal protein S13 [Isoptericola variabilis 225]
 gi|334106579|gb|AEG43469.1| 30S ribosomal protein S13 [Isoptericola variabilis 225]
Length=124

 Score =  201 bits (512),  Expect = 2e-50, Method: Compositional matrix adjust.
 Identities = 97/124 (79%), Positives = 112/124 (91%), Gaps = 0/124 (0%)

Query  1    MARLVGVDLPRDKRMEVALTYIFGIGRTRSNEILAATGIDRDLRTRDLTEEQLIHLRDYI  60
            MARLVGVDLPR+KR+EVALTYI+G+GRTR+ + LAATGI  DLR +DL + +L+ LRDY+
Sbjct  1    MARLVGVDLPREKRLEVALTYIYGVGRTRAQQTLAATGISPDLRVKDLGDAELVALRDYL  60

Query  61   EANLKVEGDLRREVQADIRRKIEIGCYQGLRHRRGMPVRGQRTKTNARTRKGPKRTIAGK  120
            E N K+EGDLRREV ADIRRK+EIG YQGLRHRRG+PVRGQRTKTNARTRKGPKRT+AGK
Sbjct  61   EGNFKLEGDLRREVAADIRRKVEIGTYQGLRHRRGLPVRGQRTKTNARTRKGPKRTVAGK  120

Query  121  KKAR  124
            KKAR
Sbjct  121  KKAR  124


>gi|152964682|ref|YP_001360466.1| 30S ribosomal protein S13 [Kineococcus radiotolerans SRS30216]
 gi|189044279|sp|A6W5W3.1|RS13_KINRD RecName: Full=30S ribosomal protein S13
 gi|151359199|gb|ABS02202.1| ribosomal protein S13 [Kineococcus radiotolerans SRS30216]
Length=126

 Score =  201 bits (512),  Expect = 2e-50, Method: Compositional matrix adjust.
 Identities = 97/123 (79%), Positives = 112/123 (92%), Gaps = 0/123 (0%)

Query  1    MARLVGVDLPRDKRMEVALTYIFGIGRTRSNEILAATGIDRDLRTRDLTEEQLIHLRDYI  60
            MARLVGVDLPR+KR+E+ALTYIFG+GRTR+ E LAATG+  DLR RDL+++ L+ LRD+I
Sbjct  1    MARLVGVDLPREKRLEIALTYIFGVGRTRAKETLAATGVSPDLRVRDLSDDDLVALRDHI  60

Query  61   EANLKVEGDLRREVQADIRRKIEIGCYQGLRHRRGMPVRGQRTKTNARTRKGPKRTIAGK  120
            E N +VEGDLRREV ADIRRK+EIG YQGLRHRRG+PVRGQRTKTNARTRKGPKRT+AGK
Sbjct  61   EGNYRVEGDLRREVAADIRRKVEIGTYQGLRHRRGLPVRGQRTKTNARTRKGPKRTVAGK  120

Query  121  KKA  123
            KKA
Sbjct  121  KKA  123


>gi|315225999|ref|ZP_07867787.1| ribosomal protein S13p/S18e [Parascardovia denticolens DSM 10105]
 gi|315120131|gb|EFT83263.1| ribosomal protein S13p/S18e [Parascardovia denticolens DSM 10105]
Length=123

 Score =  201 bits (512),  Expect = 2e-50, Method: Compositional matrix adjust.
 Identities = 95/123 (78%), Positives = 110/123 (90%), Gaps = 0/123 (0%)

Query  1    MARLVGVDLPRDKRMEVALTYIFGIGRTRSNEILAATGIDRDLRTRDLTEEQLIHLRDYI  60
            MARL GVD+P DKR+EVALTYIFG+GRTR+ E LAATGI  D+R +DLT+EQLI LRDY+
Sbjct  1    MARLAGVDIPNDKRIEVALTYIFGVGRTRAKETLAATGISPDIRVKDLTDEQLIQLRDYL  60

Query  61   EANLKVEGDLRREVQADIRRKIEIGCYQGLRHRRGMPVRGQRTKTNARTRKGPKRTIAGK  120
            E N K+EGDLRRE+ ADIRRK++I CYQG+RHRR +PVRGQRTKTNARTRKGPKRT+AGK
Sbjct  61   EGNYKIEGDLRREIDADIRRKVQINCYQGIRHRRHLPVRGQRTKTNARTRKGPKRTVAGK  120

Query  121  KKA  123
            KKA
Sbjct  121  KKA  123


>gi|213693064|ref|YP_002323650.1| ribosomal protein S13 [Bifidobacterium longum subsp. infantis 
ATCC 15697]
 gi|254811130|sp|B7GNB6.1|RS13_BIFLI RecName: Full=30S ribosomal protein S13
 gi|213524525|gb|ACJ53272.1| ribosomal protein S13 [Bifidobacterium longum subsp. infantis 
ATCC 15697]
 gi|320459242|dbj|BAJ69863.1| 30S ribosomal protein S13 [Bifidobacterium longum subsp. infantis 
ATCC 15697]
Length=125

 Score =  201 bits (511),  Expect = 3e-50, Method: Compositional matrix adjust.
 Identities = 95/123 (78%), Positives = 111/123 (91%), Gaps = 0/123 (0%)

Query  1    MARLVGVDLPRDKRMEVALTYIFGIGRTRSNEILAATGIDRDLRTRDLTEEQLIHLRDYI  60
            MARL GVD+P +KR+E+ALTYIFG+GRTR+ E LAATGI  D+R +DLT+EQLI LRDY+
Sbjct  1    MARLAGVDIPNEKRIEIALTYIFGVGRTRAKETLAATGISPDIRVKDLTDEQLITLRDYL  60

Query  61   EANLKVEGDLRREVQADIRRKIEIGCYQGLRHRRGMPVRGQRTKTNARTRKGPKRTIAGK  120
            EAN K+EGDLRRE+ ADIRRKI+I CYQG RHR+G+PVRGQRTKTNARTRKGPKRT+AGK
Sbjct  61   EANYKIEGDLRREIDADIRRKIQINCYQGQRHRKGLPVRGQRTKTNARTRKGPKRTVAGK  120

Query  121  KKA  123
            KKA
Sbjct  121  KKA  123


>gi|294786436|ref|ZP_06751690.1| 30S ribosomal protein S13 [Parascardovia denticolens F0305]
 gi|294485269|gb|EFG32903.1| 30S ribosomal protein S13 [Parascardovia denticolens F0305]
Length=134

 Score =  201 bits (511),  Expect = 3e-50, Method: Compositional matrix adjust.
 Identities = 95/123 (78%), Positives = 110/123 (90%), Gaps = 0/123 (0%)

Query  1    MARLVGVDLPRDKRMEVALTYIFGIGRTRSNEILAATGIDRDLRTRDLTEEQLIHLRDYI  60
            MARL GVD+P DKR+EVALTYIFG+GRTR+ E LAATGI  D+R +DLT+EQLI LRDY+
Sbjct  12   MARLAGVDIPNDKRIEVALTYIFGVGRTRAKETLAATGISPDIRVKDLTDEQLIQLRDYL  71

Query  61   EANLKVEGDLRREVQADIRRKIEIGCYQGLRHRRGMPVRGQRTKTNARTRKGPKRTIAGK  120
            E N K+EGDLRRE+ ADIRRK++I CYQG+RHRR +PVRGQRTKTNARTRKGPKRT+AGK
Sbjct  72   EGNYKIEGDLRREIDADIRRKVQINCYQGIRHRRHLPVRGQRTKTNARTRKGPKRTVAGK  131

Query  121  KKA  123
            KKA
Sbjct  132  KKA  134


>gi|331699148|ref|YP_004335387.1| 30S ribosomal protein S13 [Pseudonocardia dioxanivorans CB1190]
 gi|326953837|gb|AEA27534.1| 30S ribosomal protein S13 [Pseudonocardia dioxanivorans CB1190]
Length=126

 Score =  201 bits (510),  Expect = 4e-50, Method: Compositional matrix adjust.
 Identities = 97/117 (83%), Positives = 108/117 (93%), Gaps = 0/117 (0%)

Query  1    MARLVGVDLPRDKRMEVALTYIFGIGRTRSNEILAATGIDRDLRTRDLTEEQLIHLRDYI  60
            MARL GVDLPRDKRME+ALTYIFGIGRTRS EIL ATGI +DLR++DL++E L  LRDYI
Sbjct  1    MARLAGVDLPRDKRMEIALTYIFGIGRTRSLEILNATGISKDLRSKDLSDEDLTALRDYI  60

Query  61   EANLKVEGDLRREVQADIRRKIEIGCYQGLRHRRGMPVRGQRTKTNARTRKGPKRTI  117
            EAN +VEGDLRREVQADIRRKIEIGCYQG+RHRRG+PVRGQRTKTNAR RKGPK+T+
Sbjct  61   EANFRVEGDLRREVQADIRRKIEIGCYQGIRHRRGLPVRGQRTKTNARGRKGPKKTV  117


>gi|227497206|ref|ZP_03927454.1| ribosomal protein S13 [Actinomyces urogenitalis DSM 15434]
 gi|226833337|gb|EEH65720.1| ribosomal protein S13 [Actinomyces urogenitalis DSM 15434]
Length=124

 Score =  201 bits (510),  Expect = 4e-50, Method: Compositional matrix adjust.
 Identities = 96/124 (78%), Positives = 115/124 (93%), Gaps = 0/124 (0%)

Query  1    MARLVGVDLPRDKRMEVALTYIFGIGRTRSNEILAATGIDRDLRTRDLTEEQLIHLRDYI  60
            MAR+ GVDLPR+KR+EVALTYIFGIGRTR++E LAATG++ D R +DL+E++L+ LR++I
Sbjct  1    MARISGVDLPREKRVEVALTYIFGIGRTRAHETLAATGVNPDTRVKDLSEDELVLLRNHI  60

Query  61   EANLKVEGDLRREVQADIRRKIEIGCYQGLRHRRGMPVRGQRTKTNARTRKGPKRTIAGK  120
            +AN +VEGDLRREVQADIRRKIEIGCYQGLRHRR +PV GQRTKTNARTRKGPKRT+AGK
Sbjct  61   DANYQVEGDLRREVQADIRRKIEIGCYQGLRHRRHLPVHGQRTKTNARTRKGPKRTVAGK  120

Query  121  KKAR  124
            KKA+
Sbjct  121  KKAK  124


>gi|298345437|ref|YP_003718124.1| 30S ribosomal protein S13 [Mobiluncus curtisii ATCC 43063]
 gi|304390993|ref|ZP_07372945.1| 30S ribosomal protein S13 [Mobiluncus curtisii subsp. curtisii 
ATCC 35241]
 gi|315655843|ref|ZP_07908741.1| ribosomal protein S13p/S18e [Mobiluncus curtisii ATCC 51333]
 gi|315656231|ref|ZP_07909122.1| ribosomal protein S13p/S18e [Mobiluncus curtisii subsp. holmesii 
ATCC 35242]
 gi|298235498|gb|ADI66630.1| 30S ribosomal protein S13 [Mobiluncus curtisii ATCC 43063]
 gi|304325876|gb|EFL93122.1| 30S ribosomal protein S13 [Mobiluncus curtisii subsp. curtisii 
ATCC 35241]
 gi|315489907|gb|EFU79534.1| ribosomal protein S13p/S18e [Mobiluncus curtisii ATCC 51333]
 gi|315493233|gb|EFU82833.1| ribosomal protein S13p/S18e [Mobiluncus curtisii subsp. holmesii 
ATCC 35242]
Length=124

 Score =  201 bits (510),  Expect = 4e-50, Method: Compositional matrix adjust.
 Identities = 97/124 (79%), Positives = 111/124 (90%), Gaps = 0/124 (0%)

Query  1    MARLVGVDLPRDKRMEVALTYIFGIGRTRSNEILAATGIDRDLRTRDLTEEQLIHLRDYI  60
            MARLVGVDLPR+KRME+ALTYI+GIGRTR+ E LAATG+  D R +DLTE++LI LRD+I
Sbjct  1    MARLVGVDLPREKRMEIALTYIYGIGRTRATETLAATGVSPDTRVKDLTEDELIALRDFI  60

Query  61   EANLKVEGDLRREVQADIRRKIEIGCYQGLRHRRGMPVRGQRTKTNARTRKGPKRTIAGK  120
            +AN KVEGDLRREV ADIRRKIEI CYQG RHR G+PV GQRTKTNAR+RKGPKRT+AGK
Sbjct  61   QANYKVEGDLRREVAADIRRKIEINCYQGRRHRAGLPVHGQRTKTNARSRKGPKRTVAGK  120

Query  121  KKAR  124
            KKA+
Sbjct  121  KKAK  124



Lambda     K      H
   0.323    0.140    0.394 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 130872486112


  Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
    Posted date:  Sep 5, 2011  4:36 AM
  Number of letters in database: 5,219,829,388
  Number of sequences in database:  15,229,318



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40