BLASTP 2.2.25+


Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.



Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
           15,229,318 sequences; 5,219,829,388 total letters



Query= Rv3465

Length=202
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

gi|15610601|ref|NP_217982.1|  dTDP-4-dehydrorhamnose 3,5-epimeras...   416    9e-115
gi|289747298|ref|ZP_06506676.1|  dtdp-4-dehydrorhamnose 3,5-epime...   415    2e-114
gi|289759628|ref|ZP_06519006.1|  dtdp-4-dehydrorhamnose 3,5-epime...   415    2e-114
gi|340628436|ref|YP_004746888.1|  dTDP-4-dehydrorhamnose 3,5-epim...   414    3e-114
gi|148824675|ref|YP_001289429.1|  dTDP-4-dehydrorhamnose 3,5-epim...   414    3e-114
gi|289576201|ref|ZP_06456428.1|  dTDP-4-dehydrorhamnose 3,5-epime...   414    3e-114
gi|38493079|pdb|1UPI|A  Chain A, Mycobacterium Tuberculosis Rmlc ...   410    8e-113
gi|289763647|ref|ZP_06523025.1|  dTDP-4-dehydrorhamnose 3,5-epime...   405    2e-111
gi|296168674|ref|ZP_06850423.1|  dTDP-4-dehydrorhamnose 3,5-epime...   363    8e-99 
gi|240167774|ref|ZP_04746433.1|  putative dTDP-4-dehydrorhamnose ...   360    8e-98 
gi|2326951|gb|AAB66649.1|  RmlC [Mycobacterium tuberculosis]           350    9e-95 
gi|183981101|ref|YP_001849392.1|  dTDP-4-dehydrorhamnose 3,5-epim...   348    3e-94 
gi|254819210|ref|ZP_05224211.1|  dTDP-4-dehydrorhamnose 3,5-epime...   347    5e-94 
gi|118616616|ref|YP_904948.1|  dTDP-4-dehydrorhamnose 3,5-epimera...   347    5e-94 
gi|342861858|ref|ZP_08718503.1|  dTDP-4-dehydrorhamnose 3,5-epime...   347    7e-94 
gi|254776839|ref|ZP_05218355.1|  dTDP-4-dehydrorhamnose 3,5-epime...   345    2e-93 
gi|118467223|ref|YP_883542.1|  dTDP-4-dehydrorhamnose 3,5-epimera...   345    3e-93 
gi|41410322|ref|NP_963158.1|  RmlC [Mycobacterium avium subsp. pa...   341    3e-92 
gi|15828066|ref|NP_302329.1|  dTDP-4-dehydrorhamnose 3,5-epimeras...   326    1e-87 
gi|108798038|ref|YP_638235.1|  dTDP-4-dehydrorhamnose 3,5-epimera...   283    8e-75 
gi|333991928|ref|YP_004524542.1|  dTDP-4-dehydrorhamnose 35-epime...   283    1e-74 
gi|118469056|ref|YP_885893.1|  dTDP-4-dehydrorhamnose 3,5-epimera...   276    1e-72 
gi|120402375|ref|YP_952204.1|  dTDP-4-dehydrorhamnose 3,5-epimera...   253    9e-66 
gi|334337853|ref|YP_004543005.1|  dTDP-4-dehydrorhamnose 3,5-epim...   249    2e-64 
gi|325675109|ref|ZP_08154795.1|  dTDP-4-dehydrorhamnose 3,5-epime...   246    1e-63 
gi|312137739|ref|YP_004005075.1|  dtdp-4-dehydrorhamnose 3,5-epim...   246    2e-63 
gi|269957344|ref|YP_003327133.1|  dTDP-4-dehydrorhamnose 3,5-epim...   244    4e-63 
gi|296130190|ref|YP_003637440.1|  dTDP-4-dehydrorhamnose 3,5-epim...   243    1e-62 
gi|169630860|ref|YP_001704509.1|  dTDP-4-dehydrorhamnose 3,5-epim...   239    2e-61 
gi|226303737|ref|YP_002763695.1|  dTDP-6-deoxy-D-xylo-4-hexulose ...   239    2e-61 
gi|332671010|ref|YP_004454018.1|  dTDP-4-dehydrorhamnose 3,5-epim...   234    4e-60 
gi|269794231|ref|YP_003313686.1|  dTDP-4-dehydrorhamnose 3,5-epim...   234    4e-60 
gi|325673208|ref|ZP_08152901.1|  dTDP-4-dehydrorhamnose 3,5-epime...   234    6e-60 
gi|269219067|ref|ZP_06162921.1|  dTDP-4-dehydrorhamnose 3,5-epime...   234    7e-60 
gi|315502242|ref|YP_004081129.1|  dTDP-4-dehydrorhamnose 3,5-epim...   229    2e-58 
gi|302865678|ref|YP_003834315.1|  dTDP-4-dehydrorhamnose 3,5-epim...   229    2e-58 
gi|297194408|ref|ZP_06911806.1|  dTDP-4-dehydrorhamnose 3,5-epime...   228    4e-58 
gi|238560602|gb|ACR46366.1|  TDP-4-dehydrorhamnose 3,5-epimerase ...   227    7e-58 
gi|315654769|ref|ZP_07907674.1|  dTDP-4-dehydrorhamnose 3,5-epime...   222    2e-56 
gi|315657310|ref|ZP_07910192.1|  dTDP-4-dehydrorhamnose 3,5-epime...   222    3e-56 
gi|343924256|ref|ZP_08763816.1|  dTDP-6-deoxy-D-xylo-4-hexulose 3...   222    3e-56 
gi|111225335|ref|YP_716129.1|  dTDP-4-dehydrorhamnose 3,5-epimera...   222    3e-56 
gi|111021079|ref|YP_704051.1|  dTDP-4-dehydrorhamnose 3,5-epimera...   221    5e-56 
gi|158056586|emb|CAP11386.1|  3,5-epimerase [Streptomyces olivaceus]   220    8e-56 
gi|227875184|ref|ZP_03993326.1|  dTDP-4-dehydrorhamnose 3,5-epime...   219    1e-55 
gi|298346186|ref|YP_003718873.1|  dTDP-4-dehydrorhamnose 3,5-epim...   219    1e-55 
gi|226363369|ref|YP_002781151.1|  dTDP-6-deoxy-D-xylo-4-hexulose ...   219    2e-55 
gi|271962204|ref|YP_003336400.1|  dTDP-4-dehydrorhamnose 3,5-epim...   218    3e-55 
gi|269978074|ref|ZP_06185024.1|  dTDP-4-dehydrorhamnose 3,5-epime...   218    4e-55 
gi|326383444|ref|ZP_08205131.1|  dTDP-4-dehydrorhamnose 3,5-epime...   218    5e-55 


>gi|15610601|ref|NP_217982.1| dTDP-4-dehydrorhamnose 3,5-epimerase RmlC [Mycobacterium tuberculosis 
H37Rv]
 gi|15843060|ref|NP_338097.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Mycobacterium tuberculosis 
CDC1551]
 gi|31794641|ref|NP_857134.1| dTDP-4-dehydrorhamnose 3,5-epimerase RmlC [Mycobacterium bovis 
AF2122/97]
 69 more sequence titles
 Length=202

 Score =  416 bits (1069),  Expect = 9e-115, Method: Compositional matrix adjust.
 Identities = 202/202 (100%), Positives = 202/202 (100%), Gaps = 0/202 (0%)

Query  1    MKARELDVPGAWEITPTIHVDSRGLFFEWLTDHGFRAFAGHSLDVRQVNCSVSSAGVLRG  60
            MKARELDVPGAWEITPTIHVDSRGLFFEWLTDHGFRAFAGHSLDVRQVNCSVSSAGVLRG
Sbjct  1    MKARELDVPGAWEITPTIHVDSRGLFFEWLTDHGFRAFAGHSLDVRQVNCSVSSAGVLRG  60

Query  61   LHFAQLPPSQAKYVTCVSGSVFDVVVDIREGSPTFGRWDSVLLDDQDRRTIYVSEGLAHG  120
            LHFAQLPPSQAKYVTCVSGSVFDVVVDIREGSPTFGRWDSVLLDDQDRRTIYVSEGLAHG
Sbjct  61   LHFAQLPPSQAKYVTCVSGSVFDVVVDIREGSPTFGRWDSVLLDDQDRRTIYVSEGLAHG  120

Query  121  FLALQDNSTVMYLCSAEYNPQREHTICATDPTLAVDWPLVDGAAPSLSDRDAAAPSFEDV  180
            FLALQDNSTVMYLCSAEYNPQREHTICATDPTLAVDWPLVDGAAPSLSDRDAAAPSFEDV
Sbjct  121  FLALQDNSTVMYLCSAEYNPQREHTICATDPTLAVDWPLVDGAAPSLSDRDAAAPSFEDV  180

Query  181  RASGLLPRWEQTQRFIGEMRGT  202
            RASGLLPRWEQTQRFIGEMRGT
Sbjct  181  RASGLLPRWEQTQRFIGEMRGT  202


>gi|289747298|ref|ZP_06506676.1| dtdp-4-dehydrorhamnose 3,5-epimerase rmlc [Mycobacterium tuberculosis 
02_1987]
 gi|289687826|gb|EFD55314.1| dtdp-4-dehydrorhamnose 3,5-epimerase rmlc [Mycobacterium tuberculosis 
02_1987]
Length=202

 Score =  415 bits (1067),  Expect = 2e-114, Method: Compositional matrix adjust.
 Identities = 201/202 (99%), Positives = 202/202 (100%), Gaps = 0/202 (0%)

Query  1    MKARELDVPGAWEITPTIHVDSRGLFFEWLTDHGFRAFAGHSLDVRQVNCSVSSAGVLRG  60
            MKARELDVPGAWEITPTIHVDSRGLFFEWLTDHGFRAFAGHSLDVRQVNCSVSSAGVLRG
Sbjct  1    MKARELDVPGAWEITPTIHVDSRGLFFEWLTDHGFRAFAGHSLDVRQVNCSVSSAGVLRG  60

Query  61   LHFAQLPPSQAKYVTCVSGSVFDVVVDIREGSPTFGRWDSVLLDDQDRRTIYVSEGLAHG  120
            LHFAQLPPSQAKYVTCVSGSVFDVVVDIREGSPTFGRWDSVLLDDQDRRTIYVSEGLAHG
Sbjct  61   LHFAQLPPSQAKYVTCVSGSVFDVVVDIREGSPTFGRWDSVLLDDQDRRTIYVSEGLAHG  120

Query  121  FLALQDNSTVMYLCSAEYNPQREHTICATDPTLAVDWPLVDGAAPSLSDRDAAAPSFEDV  180
            FLALQDNSTVMYLCSAEYNPQREHTICATDPTLAVDWPLV+GAAPSLSDRDAAAPSFEDV
Sbjct  121  FLALQDNSTVMYLCSAEYNPQREHTICATDPTLAVDWPLVNGAAPSLSDRDAAAPSFEDV  180

Query  181  RASGLLPRWEQTQRFIGEMRGT  202
            RASGLLPRWEQTQRFIGEMRGT
Sbjct  181  RASGLLPRWEQTQRFIGEMRGT  202


>gi|289759628|ref|ZP_06519006.1| dtdp-4-dehydrorhamnose 3,5-epimerase rmlc [Mycobacterium tuberculosis 
T85]
 gi|294995761|ref|ZP_06801452.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Mycobacterium tuberculosis 
210]
 gi|289715192|gb|EFD79204.1| dtdp-4-dehydrorhamnose 3,5-epimerase rmlc [Mycobacterium tuberculosis 
T85]
 gi|326905311|gb|EGE52244.1| dTDP-4-dehydrorhamnose 3,5-epimerase rmlC [Mycobacterium tuberculosis 
W-148]
 gi|339296286|gb|AEJ48397.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Mycobacterium tuberculosis 
CCDC5079]
 gi|339299889|gb|AEJ51999.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Mycobacterium tuberculosis 
CCDC5180]
Length=202

 Score =  415 bits (1066),  Expect = 2e-114, Method: Compositional matrix adjust.
 Identities = 201/202 (99%), Positives = 202/202 (100%), Gaps = 0/202 (0%)

Query  1    MKARELDVPGAWEITPTIHVDSRGLFFEWLTDHGFRAFAGHSLDVRQVNCSVSSAGVLRG  60
            MKARELDVPGAWEITPTIHVDSRGLFFEWLTDHGFRAFAGHSLDVRQVNCSVSSAGVLRG
Sbjct  1    MKARELDVPGAWEITPTIHVDSRGLFFEWLTDHGFRAFAGHSLDVRQVNCSVSSAGVLRG  60

Query  61   LHFAQLPPSQAKYVTCVSGSVFDVVVDIREGSPTFGRWDSVLLDDQDRRTIYVSEGLAHG  120
            LHFAQLPPSQAKYVTCVSGSVFDVVVDIREGSPTFGRWDSVLLDDQDRRTIYVS+GLAHG
Sbjct  61   LHFAQLPPSQAKYVTCVSGSVFDVVVDIREGSPTFGRWDSVLLDDQDRRTIYVSDGLAHG  120

Query  121  FLALQDNSTVMYLCSAEYNPQREHTICATDPTLAVDWPLVDGAAPSLSDRDAAAPSFEDV  180
            FLALQDNSTVMYLCSAEYNPQREHTICATDPTLAVDWPLVDGAAPSLSDRDAAAPSFEDV
Sbjct  121  FLALQDNSTVMYLCSAEYNPQREHTICATDPTLAVDWPLVDGAAPSLSDRDAAAPSFEDV  180

Query  181  RASGLLPRWEQTQRFIGEMRGT  202
            RASGLLPRWEQTQRFIGEMRGT
Sbjct  181  RASGLLPRWEQTQRFIGEMRGT  202


>gi|340628436|ref|YP_004746888.1| dTDP-4-dehydrorhamnose 3,5-epimerase RMLC [Mycobacterium canettii 
CIPT 140010059]
 gi|340006626|emb|CCC45813.1| dTDP-4-dehydrorhamnose 3,5-epimerase RMLC (dTDP-4-keto-6-deoxyglucose 
3,5-epimerase) (dTDP-L-rhamnose synthetase) (thymidine 
diphospho-4-keto-rhamnose 3,5-epimerase) [Mycobacterium 
canettii CIPT 140010059]
Length=202

 Score =  414 bits (1065),  Expect = 3e-114, Method: Compositional matrix adjust.
 Identities = 201/202 (99%), Positives = 201/202 (99%), Gaps = 0/202 (0%)

Query  1    MKARELDVPGAWEITPTIHVDSRGLFFEWLTDHGFRAFAGHSLDVRQVNCSVSSAGVLRG  60
            MKARELDVPGAWEITPTIHVDSRGLFFEWLTDHGFRAFAGHSLDVRQVNCSVSSAGVLRG
Sbjct  1    MKARELDVPGAWEITPTIHVDSRGLFFEWLTDHGFRAFAGHSLDVRQVNCSVSSAGVLRG  60

Query  61   LHFAQLPPSQAKYVTCVSGSVFDVVVDIREGSPTFGRWDSVLLDDQDRRTIYVSEGLAHG  120
            LHFAQLPP QAKYVTCVSGSVFDVVVDIREGSPTFGRWDSVLLDDQDRRTIYVSEGLAHG
Sbjct  61   LHFAQLPPGQAKYVTCVSGSVFDVVVDIREGSPTFGRWDSVLLDDQDRRTIYVSEGLAHG  120

Query  121  FLALQDNSTVMYLCSAEYNPQREHTICATDPTLAVDWPLVDGAAPSLSDRDAAAPSFEDV  180
            FLALQDNSTVMYLCSAEYNPQREHTICATDPTLAVDWPLVDGAAPSLSDRDAAAPSFEDV
Sbjct  121  FLALQDNSTVMYLCSAEYNPQREHTICATDPTLAVDWPLVDGAAPSLSDRDAAAPSFEDV  180

Query  181  RASGLLPRWEQTQRFIGEMRGT  202
            RASGLLPRWEQTQRFIGEMRGT
Sbjct  181  RASGLLPRWEQTQRFIGEMRGT  202


>gi|148824675|ref|YP_001289429.1| dTDP-4-dehydrorhamnose 3,5-epimerase rmlC [Mycobacterium tuberculosis 
F11]
 gi|148723202|gb|ABR07827.1| dTDP-4-dehydrorhamnose 3,5-epimerase rmlC [Mycobacterium tuberculosis 
F11]
Length=202

 Score =  414 bits (1065),  Expect = 3e-114, Method: Compositional matrix adjust.
 Identities = 201/202 (99%), Positives = 202/202 (100%), Gaps = 0/202 (0%)

Query  1    MKARELDVPGAWEITPTIHVDSRGLFFEWLTDHGFRAFAGHSLDVRQVNCSVSSAGVLRG  60
            MKARELDVPGAWEITPTIHVDSRGLFFEWLTDHGFRAFAGHSLDVRQVNCSVSSAGVLRG
Sbjct  1    MKARELDVPGAWEITPTIHVDSRGLFFEWLTDHGFRAFAGHSLDVRQVNCSVSSAGVLRG  60

Query  61   LHFAQLPPSQAKYVTCVSGSVFDVVVDIREGSPTFGRWDSVLLDDQDRRTIYVSEGLAHG  120
            LHFAQLPPSQAKYVTCVSGSVFDVVVDIREGSPTFGRWDSVLLDDQDRRTIYVSEGLAHG
Sbjct  61   LHFAQLPPSQAKYVTCVSGSVFDVVVDIREGSPTFGRWDSVLLDDQDRRTIYVSEGLAHG  120

Query  121  FLALQDNSTVMYLCSAEYNPQREHTICATDPTLAVDWPLVDGAAPSLSDRDAAAPSFEDV  180
            FLALQDNSTV+YLCSAEYNPQREHTICATDPTLAVDWPLVDGAAPSLSDRDAAAPSFEDV
Sbjct  121  FLALQDNSTVIYLCSAEYNPQREHTICATDPTLAVDWPLVDGAAPSLSDRDAAAPSFEDV  180

Query  181  RASGLLPRWEQTQRFIGEMRGT  202
            RASGLLPRWEQTQRFIGEMRGT
Sbjct  181  RASGLLPRWEQTQRFIGEMRGT  202


>gi|289576201|ref|ZP_06456428.1| dTDP-4-dehydrorhamnose 3,5-epimerase rmlC [Mycobacterium tuberculosis 
K85]
 gi|339633470|ref|YP_004725112.1| dTDP-4-dehydrorhamnose 3,5-epimerase RMLC (dTDP-4-keto-6-deoxyglucose 
3,5-epimerase) [Mycobacterium africanum GM041182]
 gi|289540632|gb|EFD45210.1| dTDP-4-dehydrorhamnose 3,5-epimerase rmlC [Mycobacterium tuberculosis 
K85]
 gi|339332826|emb|CCC28549.1| dTDP-4-dehydrorhamnose 3,5-epimerase RMLC (dTDP-4-keto-6-deoxyglucose 
3,5-epimerase) [Mycobacterium africanum GM041182]
Length=202

 Score =  414 bits (1065),  Expect = 3e-114, Method: Compositional matrix adjust.
 Identities = 201/202 (99%), Positives = 201/202 (99%), Gaps = 0/202 (0%)

Query  1    MKARELDVPGAWEITPTIHVDSRGLFFEWLTDHGFRAFAGHSLDVRQVNCSVSSAGVLRG  60
            MKARELDVPGAWEITPTIHVDSRGLFFEWLTDHGFRAFAGHSLDVRQVNCSVSSAGVLRG
Sbjct  1    MKARELDVPGAWEITPTIHVDSRGLFFEWLTDHGFRAFAGHSLDVRQVNCSVSSAGVLRG  60

Query  61   LHFAQLPPSQAKYVTCVSGSVFDVVVDIREGSPTFGRWDSVLLDDQDRRTIYVSEGLAHG  120
            LHFAQLPPSQAKYVTCVSGSVFDVVVDIREGSPTFGRWDSVLLDDQDRRTIYVSEGLAHG
Sbjct  61   LHFAQLPPSQAKYVTCVSGSVFDVVVDIREGSPTFGRWDSVLLDDQDRRTIYVSEGLAHG  120

Query  121  FLALQDNSTVMYLCSAEYNPQREHTICATDPTLAVDWPLVDGAAPSLSDRDAAAPSFEDV  180
            FLALQDNSTVMYLCSAEYNPQREHTICA DPTLAVDWPLVDGAAPSLSDRDAAAPSFEDV
Sbjct  121  FLALQDNSTVMYLCSAEYNPQREHTICAADPTLAVDWPLVDGAAPSLSDRDAAAPSFEDV  180

Query  181  RASGLLPRWEQTQRFIGEMRGT  202
            RASGLLPRWEQTQRFIGEMRGT
Sbjct  181  RASGLLPRWEQTQRFIGEMRGT  202


>gi|38493079|pdb|1UPI|A Chain A, Mycobacterium Tuberculosis Rmlc Epimerase (Rv3465)
Length=225

 Score =  410 bits (1053),  Expect = 8e-113, Method: Compositional matrix adjust.
 Identities = 200/202 (99%), Positives = 200/202 (99%), Gaps = 0/202 (0%)

Query  1    MKARELDVPGAWEITPTIHVDSRGLFFEWLTDHGFRAFAGHSLDVRQVNCSVSSAGVLRG  60
            MKARELDVPGAWEITPTIHVDSRGLFFEWLTDHGFRAFAGHSLDVRQVNCSVSSAGVLRG
Sbjct  21   MKARELDVPGAWEITPTIHVDSRGLFFEWLTDHGFRAFAGHSLDVRQVNCSVSSAGVLRG  80

Query  61   LHFAQLPPSQAKYVTCVSGSVFDVVVDIREGSPTFGRWDSVLLDDQDRRTIYVSEGLAHG  120
            LHFAQLPPSQAKYVTCVSGSVFDVVVDIREGSPTFGRWDSVLLDDQDRRTIYVSEGLAHG
Sbjct  81   LHFAQLPPSQAKYVTCVSGSVFDVVVDIREGSPTFGRWDSVLLDDQDRRTIYVSEGLAHG  140

Query  121  FLALQDNSTVMYLCSAEYNPQREHTICATDPTLAVDWPLVDGAAPSLSDRDAAAPSFEDV  180
            FLALQDNSTVMYL SAEYNPQREHTI ATDPTLAVDWPLVDGAAPSLSDRDAAAPSFEDV
Sbjct  141  FLALQDNSTVMYLXSAEYNPQREHTIXATDPTLAVDWPLVDGAAPSLSDRDAAAPSFEDV  200

Query  181  RASGLLPRWEQTQRFIGEMRGT  202
            RASGLLPRWEQTQRFIGEMRGT
Sbjct  201  RASGLLPRWEQTQRFIGEMRGT  222


>gi|289763647|ref|ZP_06523025.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Mycobacterium tuberculosis 
GM 1503]
 gi|289711153|gb|EFD75169.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Mycobacterium tuberculosis 
GM 1503]
Length=205

 Score =  405 bits (1041),  Expect = 2e-111, Method: Compositional matrix adjust.
 Identities = 197/197 (100%), Positives = 197/197 (100%), Gaps = 0/197 (0%)

Query  1    MKARELDVPGAWEITPTIHVDSRGLFFEWLTDHGFRAFAGHSLDVRQVNCSVSSAGVLRG  60
            MKARELDVPGAWEITPTIHVDSRGLFFEWLTDHGFRAFAGHSLDVRQVNCSVSSAGVLRG
Sbjct  1    MKARELDVPGAWEITPTIHVDSRGLFFEWLTDHGFRAFAGHSLDVRQVNCSVSSAGVLRG  60

Query  61   LHFAQLPPSQAKYVTCVSGSVFDVVVDIREGSPTFGRWDSVLLDDQDRRTIYVSEGLAHG  120
            LHFAQLPPSQAKYVTCVSGSVFDVVVDIREGSPTFGRWDSVLLDDQDRRTIYVSEGLAHG
Sbjct  61   LHFAQLPPSQAKYVTCVSGSVFDVVVDIREGSPTFGRWDSVLLDDQDRRTIYVSEGLAHG  120

Query  121  FLALQDNSTVMYLCSAEYNPQREHTICATDPTLAVDWPLVDGAAPSLSDRDAAAPSFEDV  180
            FLALQDNSTVMYLCSAEYNPQREHTICATDPTLAVDWPLVDGAAPSLSDRDAAAPSFEDV
Sbjct  121  FLALQDNSTVMYLCSAEYNPQREHTICATDPTLAVDWPLVDGAAPSLSDRDAAAPSFEDV  180

Query  181  RASGLLPRWEQTQRFIG  197
            RASGLLPRWEQTQRFIG
Sbjct  181  RASGLLPRWEQTQRFIG  197


>gi|296168674|ref|ZP_06850423.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Mycobacterium parascrofulaceum 
ATCC BAA-614]
 gi|295896583|gb|EFG76224.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Mycobacterium parascrofulaceum 
ATCC BAA-614]
Length=203

 Score =  363 bits (932),  Expect = 8e-99, Method: Compositional matrix adjust.
 Identities = 172/200 (86%), Positives = 184/200 (92%), Gaps = 0/200 (0%)

Query  1    MKARELDVPGAWEITPTIHVDSRGLFFEWLTDHGFRAFAGHSLDVRQVNCSVSSAGVLRG  60
            MK REL +PGAWEITPTIH DSRGLFFEWLTDHGF  FAGH LDVRQ NCSVSSAGVLRG
Sbjct  2    MKVRELAIPGAWEITPTIHGDSRGLFFEWLTDHGFTEFAGHRLDVRQANCSVSSAGVLRG  61

Query  61   LHFAQLPPSQAKYVTCVSGSVFDVVVDIREGSPTFGRWDSVLLDDQDRRTIYVSEGLAHG  120
            LHFAQLPPSQAKYVTCV GSVFDVVVDIREGSPTFG+WDSVLLDD+DRRTIY+SEGLAHG
Sbjct  62   LHFAQLPPSQAKYVTCVRGSVFDVVVDIREGSPTFGQWDSVLLDDKDRRTIYLSEGLAHG  121

Query  121  FLALQDNSTVMYLCSAEYNPQREHTICATDPTLAVDWPLVDGAAPSLSDRDAAAPSFEDV  180
            FLALQD+STVMYLCSAEYNPQRE TICATDP + VDWPLV+GAAP+LSDRDAAAP FE+V
Sbjct  122  FLALQDDSTVMYLCSAEYNPQRERTICATDPAIGVDWPLVNGAAPTLSDRDAAAPMFEEV  181

Query  181  RASGLLPRWEQTQRFIGEMR  200
            RA+GLLP W++TQ FI  MR
Sbjct  182  RAAGLLPSWQETQAFIAGMR  201


>gi|240167774|ref|ZP_04746433.1| putative dTDP-4-dehydrorhamnose 3,5-epimerase [Mycobacterium 
kansasii ATCC 12478]
Length=202

 Score =  360 bits (923),  Expect = 8e-98, Method: Compositional matrix adjust.
 Identities = 168/201 (84%), Positives = 185/201 (93%), Gaps = 0/201 (0%)

Query  1    MKARELDVPGAWEITPTIHVDSRGLFFEWLTDHGFRAFAGHSLDVRQVNCSVSSAGVLRG  60
            MK RELD+PGAWEITPTIH DSRGLFFEWLT+ GF AFAGH LDVRQ NCSVS+AGVLRG
Sbjct  1    MKVRELDIPGAWEITPTIHGDSRGLFFEWLTERGFSAFAGHRLDVRQANCSVSAAGVLRG  60

Query  61   LHFAQLPPSQAKYVTCVSGSVFDVVVDIREGSPTFGRWDSVLLDDQDRRTIYVSEGLAHG  120
            LHFA+LPPSQAKYVTCVSGSVFDVVVDIR GSPTFGRWD+V+LDD DRR++Y+SEGLAHG
Sbjct  61   LHFAELPPSQAKYVTCVSGSVFDVVVDIRLGSPTFGRWDAVVLDDVDRRSVYISEGLAHG  120

Query  121  FLALQDNSTVMYLCSAEYNPQREHTICATDPTLAVDWPLVDGAAPSLSDRDAAAPSFEDV  180
            FLALQDNSTVMYLCSAEYNPQREHTICATDPTLA+DWPLVDG A SLSDRDAAAPS ++V
Sbjct  121  FLALQDNSTVMYLCSAEYNPQREHTICATDPTLAIDWPLVDGVAASLSDRDAAAPSLQEV  180

Query  181  RASGLLPRWEQTQRFIGEMRG  201
            RASG+LP W  T++F+  +RG
Sbjct  181  RASGVLPTWAATRKFVDALRG  201


>gi|2326951|gb|AAB66649.1| RmlC [Mycobacterium tuberculosis]
Length=203

 Score =  350 bits (897),  Expect = 9e-95, Method: Compositional matrix adjust.
 Identities = 176/201 (88%), Positives = 180/201 (90%), Gaps = 1/201 (0%)

Query  2    KARELDVPGAWEITPTIHVDSRGLFFEWLTDHGFRAFAGHSLDVRQVNCSVSSAGVLRGL  61
            + RELDVPGAWEITPTIHVDSRGLFFEWLTDHGFRAFAGHSLDVRQVNCSVSSAGVLRGL
Sbjct  4    EPRELDVPGAWEITPTIHVDSRGLFFEWLTDHGFRAFAGHSLDVRQVNCSVSSAGVLRGL  63

Query  62   HFAQLPPSQAKYVTCVSGSVFDVVVDIREGSPTFGRWDSVLLDDQDRRTIYVSEGLAHGF  121
            HFAQLPPSQAKYVTCVSGSVFDVVVDIREGSPTFGRWDSVLLDDQD R IYVS+GLAHGF
Sbjct  64   HFAQLPPSQAKYVTCVSGSVFDVVVDIREGSPTFGRWDSVLLDDQD-RNIYVSDGLAHGF  122

Query  122  LALQDNSTVMYLCSAEYNPQREHTICATDPTLAVDWPLVDGAAPSLSDRDAAAPSFEDVR  181
            LALQDNSTVMYLCSAEYNPQR+HTICATDPTLA      DG  PSLSDRDAAAPSFE+  
Sbjct  123  LALQDNSTVMYLCSAEYNPQRQHTICATDPTLASIRRWSDGGCPSLSDRDAAAPSFEEDV  182

Query  182  ASGLLPRWEQTQRFIGEMRGT  202
              GLLP      RFIGEMRGT
Sbjct  183  RRGLLPGGTDVSRFIGEMRGT  203


>gi|183981101|ref|YP_001849392.1| dTDP-4-dehydrorhamnose 3,5-epimerase, RmlC [Mycobacterium marinum 
M]
 gi|183174427|gb|ACC39537.1| dTDP-4-dehydrorhamnose 3,5-epimerase, RmlC [Mycobacterium marinum 
M]
Length=201

 Score =  348 bits (893),  Expect = 3e-94, Method: Compositional matrix adjust.
 Identities = 167/202 (83%), Positives = 183/202 (91%), Gaps = 1/202 (0%)

Query  1    MKARELDVPGAWEITPTIHVDSRGLFFEWLTDHGFRAFAGHSLDVRQVNCSVSSAGVLRG  60
            M+AREL VPGAWEITPTIH DSRG+FFEWLTD GF AF GH  DVRQ NCSVSSAGVLRG
Sbjct  1    MQARELKVPGAWEITPTIHGDSRGMFFEWLTDSGFTAFCGHRFDVRQANCSVSSAGVLRG  60

Query  61   LHFAQLPPSQAKYVTCVSGSVFDVVVDIREGSPTFGRWDSVLLDDQDRRTIYVSEGLAHG  120
            LHFA+LPPSQAKYVTCVSG+VFDVVVDIR GSPTFG+WDSVLLDD+  R+IY+SEGLAHG
Sbjct  61   LHFAELPPSQAKYVTCVSGAVFDVVVDIRLGSPTFGQWDSVLLDDR-HRSIYISEGLAHG  119

Query  121  FLALQDNSTVMYLCSAEYNPQREHTICATDPTLAVDWPLVDGAAPSLSDRDAAAPSFEDV  180
            FLALQD STVMY+CSAEYNPQREHTICATDP LA+DWPLVDGA PSLS+RDAAA S ++V
Sbjct  120  FLALQDKSTVMYMCSAEYNPQREHTICATDPELAIDWPLVDGAPPSLSERDAAAGSLDEV  179

Query  181  RASGLLPRWEQTQRFIGEMRGT  202
            RASG+LP WE+TQRFI  +RGT
Sbjct  180  RASGVLPTWEETQRFIDGLRGT  201


>gi|254819210|ref|ZP_05224211.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Mycobacterium intracellulare 
ATCC 13950]
Length=209

 Score =  347 bits (890),  Expect = 5e-94, Method: Compositional matrix adjust.
 Identities = 163/200 (82%), Positives = 178/200 (89%), Gaps = 0/200 (0%)

Query  1    MKARELDVPGAWEITPTIHVDSRGLFFEWLTDHGFRAFAGHSLDVRQVNCSVSSAGVLRG  60
            ++ REL VPGAWEITP +H DSRG FFEWLTD GFR+FAGH LDVRQ NCSVSSAGVLRG
Sbjct  5    VEVRELKVPGAWEITPAVHGDSRGHFFEWLTDKGFRSFAGHRLDVRQANCSVSSAGVLRG  64

Query  61   LHFAQLPPSQAKYVTCVSGSVFDVVVDIREGSPTFGRWDSVLLDDQDRRTIYVSEGLAHG  120
            LHFAQ+PPSQAKYVTCV G+VFDVVVDIR GSPTFG+WDSVLLDD + RTIY+SEGL HG
Sbjct  65   LHFAQVPPSQAKYVTCVRGAVFDVVVDIRVGSPTFGQWDSVLLDDTEHRTIYISEGLGHG  124

Query  121  FLALQDNSTVMYLCSAEYNPQREHTICATDPTLAVDWPLVDGAAPSLSDRDAAAPSFEDV  180
            FLALQDNSTVMYLCSAEYNPQREHTICATDP L +DWPLVDGA P+LSDRDAAAPS +DV
Sbjct  125  FLALQDNSTVMYLCSAEYNPQREHTICATDPALGIDWPLVDGAPPTLSDRDAAAPSLDDV  184

Query  181  RASGLLPRWEQTQRFIGEMR  200
            RASGLLP WE+T  F+  +R
Sbjct  185  RASGLLPTWEETNAFVEGLR  204


>gi|118616616|ref|YP_904948.1| dTDP-4-dehydrorhamnose 3,5-epimerase, RmlC [Mycobacterium ulcerans 
Agy99]
 gi|118568726|gb|ABL03477.1| dTDP-4-dehydrorhamnose 3,5-epimerase, RmlC [Mycobacterium ulcerans 
Agy99]
Length=201

 Score =  347 bits (890),  Expect = 5e-94, Method: Compositional matrix adjust.
 Identities = 166/202 (83%), Positives = 183/202 (91%), Gaps = 1/202 (0%)

Query  1    MKARELDVPGAWEITPTIHVDSRGLFFEWLTDHGFRAFAGHSLDVRQVNCSVSSAGVLRG  60
            M+AREL VPGAWEITPTIH DSRG+FFEWLTD GF AF GH  DVRQ NCSVSSAGVLRG
Sbjct  1    MQARELKVPGAWEITPTIHGDSRGMFFEWLTDSGFTAFCGHRFDVRQANCSVSSAGVLRG  60

Query  61   LHFAQLPPSQAKYVTCVSGSVFDVVVDIREGSPTFGRWDSVLLDDQDRRTIYVSEGLAHG  120
            LHFA+LPPSQ+KYVTCVSG+VFDVVVDIR GSPTFG+WDSVLLDD+  R+IY+SEGLAHG
Sbjct  61   LHFAELPPSQSKYVTCVSGAVFDVVVDIRLGSPTFGQWDSVLLDDR-HRSIYISEGLAHG  119

Query  121  FLALQDNSTVMYLCSAEYNPQREHTICATDPTLAVDWPLVDGAAPSLSDRDAAAPSFEDV  180
            FLALQD STVMY+CSAEYNPQREHTICATDP LA+DWPLVDGA PSLS+RDAAA S ++V
Sbjct  120  FLALQDKSTVMYMCSAEYNPQREHTICATDPELAIDWPLVDGAPPSLSERDAAAGSLDEV  179

Query  181  RASGLLPRWEQTQRFIGEMRGT  202
            RASG+LP WE+TQRFI  +RGT
Sbjct  180  RASGVLPTWEETQRFIDGLRGT  201


>gi|342861858|ref|ZP_08718503.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Mycobacterium colombiense 
CECT 3035]
 gi|342130675|gb|EGT83979.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Mycobacterium colombiense 
CECT 3035]
Length=201

 Score =  347 bits (889),  Expect = 7e-94, Method: Compositional matrix adjust.
 Identities = 166/201 (83%), Positives = 179/201 (90%), Gaps = 0/201 (0%)

Query  1    MKARELDVPGAWEITPTIHVDSRGLFFEWLTDHGFRAFAGHSLDVRQVNCSVSSAGVLRG  60
            M  REL VPGAWEITP +H DSRG FFEWLTD GFR+FAGH LDVRQ NCSVSSAGVLRG
Sbjct  1    MDVRELKVPGAWEITPAVHGDSRGHFFEWLTDKGFRSFAGHRLDVRQANCSVSSAGVLRG  60

Query  61   LHFAQLPPSQAKYVTCVSGSVFDVVVDIREGSPTFGRWDSVLLDDQDRRTIYVSEGLAHG  120
            LHFA++PPSQAKYVTCV GSVFDVVVDIR GSPTFG+WDSVLLDD D RTIY+SEGL HG
Sbjct  61   LHFAEVPPSQAKYVTCVRGSVFDVVVDIRVGSPTFGQWDSVLLDDTDHRTIYLSEGLGHG  120

Query  121  FLALQDNSTVMYLCSAEYNPQREHTICATDPTLAVDWPLVDGAAPSLSDRDAAAPSFEDV  180
            FLALQDNSTVMYLCSAEYNPQREHTI ATDP LA+DWPLVDGA P+LSDRDAAAPS E+V
Sbjct  121  FLALQDNSTVMYLCSAEYNPQREHTIRATDPALAIDWPLVDGAPPNLSDRDAAAPSLEEV  180

Query  181  RASGLLPRWEQTQRFIGEMRG  201
            RASGLLP W++T+ FI  +RG
Sbjct  181  RASGLLPTWDETKAFIDGLRG  201


>gi|254776839|ref|ZP_05218355.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Mycobacterium avium subsp. 
avium ATCC 25291]
 gi|336460712|gb|EGO39602.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Mycobacterium avium subsp. 
paratuberculosis S397]
Length=201

 Score =  345 bits (885),  Expect = 2e-93, Method: Compositional matrix adjust.
 Identities = 163/196 (84%), Positives = 176/196 (90%), Gaps = 0/196 (0%)

Query  1    MKARELDVPGAWEITPTIHVDSRGLFFEWLTDHGFRAFAGHSLDVRQVNCSVSSAGVLRG  60
            M AREL VPGAWEITPT+H D+RG FFEWLTD GFR+FAGH LDVRQ NCSVS+AGVLRG
Sbjct  1    MSARELKVPGAWEITPTVHGDARGHFFEWLTDKGFRSFAGHRLDVRQANCSVSAAGVLRG  60

Query  61   LHFAQLPPSQAKYVTCVSGSVFDVVVDIREGSPTFGRWDSVLLDDQDRRTIYVSEGLAHG  120
            LHFAQ+PPSQAKYVTCV GSVFDVVVDIR GSPTFG+WDSVLLDD + RTIY+SEGL HG
Sbjct  61   LHFAQVPPSQAKYVTCVRGSVFDVVVDIRVGSPTFGQWDSVLLDDAEHRTIYISEGLGHG  120

Query  121  FLALQDNSTVMYLCSAEYNPQREHTICATDPTLAVDWPLVDGAAPSLSDRDAAAPSFEDV  180
            FLALQDNSTVMYLCSAEYNP REHTICATDP L +DWPLV GAAP+LS+RDAAAPS E+V
Sbjct  121  FLALQDNSTVMYLCSAEYNPGREHTICATDPALGIDWPLVAGAAPTLSERDAAAPSLEEV  180

Query  181  RASGLLPRWEQTQRFI  196
            RASGLLP W +TQ FI
Sbjct  181  RASGLLPTWAETQAFI  196


>gi|118467223|ref|YP_883542.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Mycobacterium avium 104]
 gi|118168510|gb|ABK69407.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Mycobacterium avium 104]
Length=201

 Score =  345 bits (884),  Expect = 3e-93, Method: Compositional matrix adjust.
 Identities = 162/196 (83%), Positives = 176/196 (90%), Gaps = 0/196 (0%)

Query  1    MKARELDVPGAWEITPTIHVDSRGLFFEWLTDHGFRAFAGHSLDVRQVNCSVSSAGVLRG  60
            M AREL +PGAWEITPT+H D+RG FFEWLTD GFR+FAGH LDVRQ NCSVS+AGVLRG
Sbjct  1    MSARELKIPGAWEITPTVHGDARGHFFEWLTDKGFRSFAGHRLDVRQANCSVSAAGVLRG  60

Query  61   LHFAQLPPSQAKYVTCVSGSVFDVVVDIREGSPTFGRWDSVLLDDQDRRTIYVSEGLAHG  120
            LHFAQ+PPSQAKYVTCV GSVFDVVVDIR GSPTFG+WDSVLLDD + RTIY+SEGL HG
Sbjct  61   LHFAQVPPSQAKYVTCVRGSVFDVVVDIRVGSPTFGQWDSVLLDDAEHRTIYISEGLGHG  120

Query  121  FLALQDNSTVMYLCSAEYNPQREHTICATDPTLAVDWPLVDGAAPSLSDRDAAAPSFEDV  180
            FLALQDNSTVMYLCSAEYNP REHTICATDP L +DWPLV GAAP+LS+RDAAAPS E+V
Sbjct  121  FLALQDNSTVMYLCSAEYNPGREHTICATDPALGIDWPLVAGAAPTLSERDAAAPSLEEV  180

Query  181  RASGLLPRWEQTQRFI  196
            RASGLLP W +TQ FI
Sbjct  181  RASGLLPTWAETQAFI  196


>gi|41410322|ref|NP_963158.1| RmlC [Mycobacterium avium subsp. paratuberculosis K-10]
 gi|41399156|gb|AAS06774.1| RmlC [Mycobacterium avium subsp. paratuberculosis K-10]
Length=201

 Score =  341 bits (875),  Expect = 3e-92, Method: Compositional matrix adjust.
 Identities = 162/196 (83%), Positives = 175/196 (90%), Gaps = 0/196 (0%)

Query  1    MKARELDVPGAWEITPTIHVDSRGLFFEWLTDHGFRAFAGHSLDVRQVNCSVSSAGVLRG  60
            M AREL VPGAWEITPT+H D+RG FFEWLTD GFR+FAGH LDVRQ NCSVS+AGVLRG
Sbjct  1    MSARELKVPGAWEITPTVHGDARGHFFEWLTDKGFRSFAGHRLDVRQANCSVSAAGVLRG  60

Query  61   LHFAQLPPSQAKYVTCVSGSVFDVVVDIREGSPTFGRWDSVLLDDQDRRTIYVSEGLAHG  120
            LHFAQ+P SQAKYVTCV GSVFDVVVDIR GSPTFG+WDSVLLDD + RTIY+SEGL HG
Sbjct  61   LHFAQVPLSQAKYVTCVRGSVFDVVVDIRVGSPTFGQWDSVLLDDAEHRTIYISEGLGHG  120

Query  121  FLALQDNSTVMYLCSAEYNPQREHTICATDPTLAVDWPLVDGAAPSLSDRDAAAPSFEDV  180
            FLALQDNSTVMYLCSAEYNP REHTICATDP L +DWPLV GAAP+LS+RDAAAPS E+V
Sbjct  121  FLALQDNSTVMYLCSAEYNPGREHTICATDPALGIDWPLVAGAAPTLSERDAAAPSLEEV  180

Query  181  RASGLLPRWEQTQRFI  196
            RASGLLP W +TQ FI
Sbjct  181  RASGLLPTWAETQAFI  196


>gi|15828066|ref|NP_302329.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Mycobacterium leprae TN]
 gi|221230543|ref|YP_002503959.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Mycobacterium leprae Br4923]
 gi|4539119|emb|CAB39840.1| putative dTDP-4-dehydrorhamnose 3,5-epimerase [Mycobacterium 
leprae]
 gi|13093620|emb|CAC30920.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Mycobacterium leprae]
 gi|219933650|emb|CAR72062.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Mycobacterium leprae Br4923]
Length=202

 Score =  326 bits (835),  Expect = 1e-87, Method: Compositional matrix adjust.
 Identities = 150/199 (76%), Positives = 168/199 (85%), Gaps = 0/199 (0%)

Query  1    MKARELDVPGAWEITPTIHVDSRGLFFEWLTDHGFRAFAGHSLDVRQVNCSVSSAGVLRG  60
            M  +ELD+ GAWEITPTIH DSRG+FFEWLT   F AF GH LDVRQ NCSVSSAGVLRG
Sbjct  1    MNVKELDISGAWEITPTIHSDSRGMFFEWLTASRFSAFTGHRLDVRQANCSVSSAGVLRG  60

Query  61   LHFAQLPPSQAKYVTCVSGSVFDVVVDIREGSPTFGRWDSVLLDDQDRRTIYVSEGLAHG  120
            LHFAQ+PPSQAKYVTCV+GSVFDVVVDIR GSPTFG W S+ L+D +R+TIY+SE LAHG
Sbjct  61   LHFAQVPPSQAKYVTCVTGSVFDVVVDIRLGSPTFGCWTSITLNDSNRKTIYISESLAHG  120

Query  121  FLALQDNSTVMYLCSAEYNPQREHTICATDPTLAVDWPLVDGAAPSLSDRDAAAPSFEDV  180
            FLALQDNSTVMYLCSAEYNP REH ICATDP LA+DWP+VDG    LS RDA AP+ +D+
Sbjct  121  FLALQDNSTVMYLCSAEYNPAREHAICATDPDLAIDWPVVDGVDTHLSKRDATAPNLDDI  180

Query  181  RASGLLPRWEQTQRFIGEM  199
            RASGLLP W++TQ FI  +
Sbjct  181  RASGLLPTWDETQNFIANL  199


>gi|108798038|ref|YP_638235.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Mycobacterium sp. MCS]
 gi|119867133|ref|YP_937085.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Mycobacterium sp. KMS]
 gi|126433699|ref|YP_001069390.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Mycobacterium sp. JLS]
 gi|108768457|gb|ABG07179.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Mycobacterium sp. MCS]
 gi|119693222|gb|ABL90295.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Mycobacterium sp. KMS]
 gi|126233499|gb|ABN96899.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Mycobacterium sp. JLS]
Length=195

 Score =  283 bits (725),  Expect = 8e-75, Method: Compositional matrix adjust.
 Identities = 137/190 (73%), Positives = 153/190 (81%), Gaps = 2/190 (1%)

Query  1    MKARELDVPGAWEITPTIHVDSRGLFFEWLTDHGFRAFAGHSLDVRQVNCSVSSAGVLRG  60
            M AREL VPGAWEITPT+H DSRG F EW TD  F AFAGH LDVRQ NCSVS AGVLRG
Sbjct  1    MSARELAVPGAWEITPTVHADSRGSFMEWFTDREFTAFAGHRLDVRQANCSVSRAGVLRG  60

Query  61   LHFAQLPPSQAKYVTCVSGSVFDVVVDIREGSPTFGRWDSVLLDDQDRRTIYVSEGLAHG  120
            LHFA +PP QAKYVTCV G+VFDV VDIR GSPTFGRWD+VLLDD+DRR+IY+SEGL H 
Sbjct  61   LHFAAVPPGQAKYVTCVRGAVFDVAVDIRVGSPTFGRWDAVLLDDRDRRSIYLSEGLGHA  120

Query  121  FLALQDNSTVMYLCSAEYNPQREHTICATDPTLAVDWPLVDGAAPSLSDRDAAAPSFEDV  180
            FLALQD+STVMYLCS  Y+P REHT+  TDP L ++WP  DG    LSDRDAAAP+ +  
Sbjct  121  FLALQDDSTVMYLCSTGYDPAREHTVSPTDPALGIEWPF-DGEL-VLSDRDAAAPTLDQA  178

Query  181  RASGLLPRWE  190
            R +GLLP W+
Sbjct  179  RDAGLLPTWD  188


>gi|333991928|ref|YP_004524542.1| dTDP-4-dehydrorhamnose 35-epimerase RmlC [Mycobacterium sp. JDM601]
 gi|333487896|gb|AEF37288.1| dTDP-4-dehydrorhamnose 35-epimerase RmlC [Mycobacterium sp. JDM601]
Length=190

 Score =  283 bits (724),  Expect = 1e-74, Method: Compositional matrix adjust.
 Identities = 133/191 (70%), Positives = 156/191 (82%), Gaps = 2/191 (1%)

Query  1    MKARELDVPGAWEITPTIHVDSRGLFFEWLTDHGFRAFAGHSLDVRQVNCSVSSAGVLRG  60
            M  REL VPGAWE+TPT H D+RG+FFEW TD  F  FAGH  D+RQ NCSVS AGVLRG
Sbjct  1    MAFRELAVPGAWELTPTQHADARGVFFEWFTDREFTGFAGHRFDLRQANCSVSRAGVLRG  60

Query  61   LHFAQLPPSQAKYVTCVSGSVFDVVVDIREGSPTFGRWDSVLLDDQDRRTIYVSEGLAHG  120
            LHFAQ PP QAKYVTCV+GSVFDVVVD+R GSPT+GRWD+VLLD +DRR++Y++ GLAHG
Sbjct  61   LHFAQPPPGQAKYVTCVTGSVFDVVVDVRAGSPTYGRWDAVLLDARDRRSVYIAAGLAHG  120

Query  121  FLALQDNSTVMYLCSAEYNPQREHTICATDPTLAVDWPLVDGAAPSLSDRDAAAPSFEDV  180
            FLALQD+STVMYLCSAEY+PQREHTI ATDP + +DWP        +S+RD  AP+  +V
Sbjct  121  FLALQDDSTVMYLCSAEYDPQREHTISATDPAIGIDWPADHPLV--VSERDREAPTLAEV  178

Query  181  RASGLLPRWEQ  191
            RA+GLLP W+Q
Sbjct  179  RAAGLLPVWDQ  189


>gi|118469056|ref|YP_885893.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Mycobacterium smegmatis 
str. MC2 155]
 gi|310947299|sp|A0QSK5.1|RMLC_MYCS2 RecName: Full=dTDP-4-dehydrorhamnose 3,5-epimerase; AltName: 
Full=Thymidine diphospho-4-keto-rhamnose 3,5-epimerase; AltName: 
Full=dTDP-4-keto-6-deoxyglucose 3,5-epimerase; AltName: 
Full=dTDP-6-deoxy-D-xylo-4-hexulose 3,5-epimerase; AltName: 
Full=dTDP-L-rhamnose synthase
 gi|118170343|gb|ABK71239.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Mycobacterium smegmatis 
str. MC2 155]
Length=201

 Score =  276 bits (707),  Expect = 1e-72, Method: Compositional matrix adjust.
 Identities = 133/200 (67%), Positives = 155/200 (78%), Gaps = 4/200 (2%)

Query  1    MKARELDVPGAWEITPTIHVDSRGLFFEWLTDHGFRAFAGHSLDVRQVNCSVSSAGVLRG  60
            M AREL + GAWEITP +  DSRGLFFEW TD GF  FAGH  D+RQ NCSVS+ GVLRG
Sbjct  1    MTARELSIAGAWEITPVLRTDSRGLFFEWFTDAGFTEFAGHQFDMRQANCSVSARGVLRG  60

Query  61   LHFAQLPPSQAKYVTCVSGSVFDVVVDIREGSPTFGRWDSVLLDDQDRRTIYVSEGLAHG  120
            +HFAQ+PPSQAKYVTCV G+VFDVVVDIR GSPTFG+WD+VLLDD+DRR+IY+SEGL H 
Sbjct  61   VHFAQVPPSQAKYVTCVRGAVFDVVVDIRVGSPTFGQWDAVLLDDKDRRSIYISEGLGHA  120

Query  121  FLALQDNSTVMYLCSAEYNPQREHTICATDPTLAVDWPLVDGAAPSLSDRDAAAPSFEDV  180
            FLAL D+STVMYLCSA Y PQREHT+  TD    ++WP V      LSDRDA APS  + 
Sbjct  121  FLALDDDSTVMYLCSAPYAPQREHTVRPTD--FGIEWPEVPELI--LSDRDAQAPSLAEA  176

Query  181  RASGLLPRWEQTQRFIGEMR  200
            +A+G+LP W   Q F+  +R
Sbjct  177  QAAGVLPTWADCQAFVETLR  196


>gi|120402375|ref|YP_952204.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Mycobacterium vanbaalenii 
PYR-1]
 gi|119955193|gb|ABM12198.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Mycobacterium vanbaalenii 
PYR-1]
Length=207

 Score =  253 bits (647),  Expect = 9e-66, Method: Compositional matrix adjust.
 Identities = 135/208 (65%), Positives = 155/208 (75%), Gaps = 12/208 (5%)

Query  1    MKARELDVPGAWEITPTIHVDSRGLFFEWLTDHGFRAFAGHSLDVRQVNCSVSSAGVLRG  60
            M  REL +PGAWEITP +H D+RG FFEW TD GF A  GH LD+RQ NCSVS AGVLRG
Sbjct  1    MNVRELTIPGAWEITPVVHTDARGAFFEWFTDAGFTAITGHRLDLRQANCSVSRAGVLRG  60

Query  61   LHFAQLPPSQAKYVTCVSGSVFDVVVDIREGSPTFGRWDSVLLDDQDRRTIYVSEGLAHG  120
            +HFAQLPPSQAKYV+CV G+V DVVVDIR GSPTFGRWD+V+LDD+  R++Y+SEGL H 
Sbjct  61   VHFAQLPPSQAKYVSCVRGAVVDVVVDIRVGSPTFGRWDAVVLDDETHRSVYLSEGLGHA  120

Query  121  FLALQDNSTVMYLCSAEYNPQREHTICATDPTLAVDWPLVDGAAPS--------LSDRDA  172
            FLAL D+S V YLCSA Y+P REHTI   DP L +DW     A PS        LSDRD 
Sbjct  121  FLALHDDSVVTYLCSAGYDPAREHTIDPLDPALEIDW----NAWPSRAADGELILSDRDR  176

Query  173  AAPSFEDVRASGLLPRWEQTQRFIGEMR  200
            AAPS E  R SGLLP WEQT++F+  +R
Sbjct  177  AAPSLEQARTSGLLPTWEQTKKFVDGLR  204


>gi|334337853|ref|YP_004543005.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Isoptericola variabilis 
225]
 gi|334108221|gb|AEG45111.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Isoptericola variabilis 
225]
Length=205

 Score =  249 bits (635),  Expect = 2e-64, Method: Compositional matrix adjust.
 Identities = 119/204 (59%), Positives = 144/204 (71%), Gaps = 4/204 (1%)

Query  1    MKARELDVPGAWEITPTIHVDSRGLFFEWLTDHGFRAFAGHSLDVRQVNCSVSSAGVLRG  60
            M+ REL VPGA+EITP    D RG+F EW     F    GH LD++Q NCSVSSAGVLRG
Sbjct  1    MQYRELAVPGAFEITPKQFGDPRGVFLEWFKAAAFEEALGHPLDLQQANCSVSSAGVLRG  60

Query  61   LHFAQLPPSQAKYVTCVSGSVFDVVVDIREGSPTFGRWDSVLLDDQDRRTIYVSEGLAHG  120
            +HFA +PP QAKYVTC  G+V DVVVDIR GSPTFGRWDSVLLDD DRR IY+ EGL H 
Sbjct  61   IHFADVPPGQAKYVTCAKGAVLDVVVDIRVGSPTFGRWDSVLLDDTDRRAIYLGEGLGHA  120

Query  121  FLALQDNSTVMYLCSAEYNPQREHTICATDPTLAVDWPLV--DGA--APSLSDRDAAAPS  176
            F+AL+D STVMY+CS  YNP REH +   DP + +DWP    DG+  +P LS++D AAP+
Sbjct  121  FMALEDGSTVMYMCSTGYNPGREHGVHPLDPAIGIDWPTTARDGSPLSPLLSEKDEAAPT  180

Query  177  FEDVRASGLLPRWEQTQRFIGEMR  200
             ++  A GLLP  E    ++  +R
Sbjct  181  LDEAAAQGLLPTAEAVDEYVRSLR  204


>gi|325675109|ref|ZP_08154795.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Rhodococcus equi ATCC 33707]
 gi|325554070|gb|EGD23746.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Rhodococcus equi ATCC 33707]
Length=201

 Score =  246 bits (628),  Expect = 1e-63, Method: Compositional matrix adjust.
 Identities = 117/195 (60%), Positives = 147/195 (76%), Gaps = 4/195 (2%)

Query  1    MKARELDVPGAWEITPTIHVDSRGLFFEWLTDHGFRAFAGHSLDVRQVNCSVSSAGVLRG  60
            M  REL VPGAWEITP    D RG+F EW  D GF A  G +LD+ Q NCSVS+AGVLRG
Sbjct  4    MDYRELKVPGAWEITPRQFGDHRGVFLEWFKDPGFSANVGRTLDLAQANCSVSAAGVLRG  63

Query  61   LHFAQLPPSQAKYVTCVSGSVFDVVVDIREGSPTFGRWDSVLLDDQDRRTIYVSEGLAHG  120
            +HFA +PP QAKYVTCV G++ DVVVD+R GSPTFG+WDSVLLDD DRR +++SEGL HG
Sbjct  64   IHFADVPPGQAKYVTCVRGAILDVVVDLRVGSPTFGQWDSVLLDDVDRRAVFISEGLGHG  123

Query  121  FLALQDNSTVMYLCSAEYNPQREHTICATDPTLAVDWPLV--DGAAP--SLSDRDAAAPS  176
            FL+L+D+STV+YLCS  Y P REH +   DP + +DWP+V  DG++   +LSD+D AAP+
Sbjct  124  FLSLEDDSTVIYLCSTGYAPDREHEVSPLDPGIGIDWPVVGRDGSSLQWTLSDKDLAAPT  183

Query  177  FEDVRASGLLPRWEQ  191
             +  R +GLLP + +
Sbjct  184  LQQARDAGLLPVYRE  198


>gi|312137739|ref|YP_004005075.1| dtdp-4-dehydrorhamnose 3,5-epimerase rmlc [Rhodococcus equi 103S]
 gi|311887078|emb|CBH46387.1| dTDP-4-dehydrorhamnose 3,5-epimerase RmlC [Rhodococcus equi 103S]
Length=198

 Score =  246 bits (628),  Expect = 2e-63, Method: Compositional matrix adjust.
 Identities = 117/195 (60%), Positives = 147/195 (76%), Gaps = 4/195 (2%)

Query  1    MKARELDVPGAWEITPTIHVDSRGLFFEWLTDHGFRAFAGHSLDVRQVNCSVSSAGVLRG  60
            M  REL VPGAWEITP    D RG+F EW  D GF A  G +LD+ Q NCSVS+AGVLRG
Sbjct  1    MDYRELKVPGAWEITPRQFGDHRGVFLEWFKDPGFSANVGRTLDLAQANCSVSAAGVLRG  60

Query  61   LHFAQLPPSQAKYVTCVSGSVFDVVVDIREGSPTFGRWDSVLLDDQDRRTIYVSEGLAHG  120
            +HFA +PP QAKYVTCV G++ DVVVD+R GSPTFG+WDSVLLDD DRR +++SEGL HG
Sbjct  61   IHFADVPPGQAKYVTCVRGAILDVVVDLRVGSPTFGQWDSVLLDDVDRRAVFISEGLGHG  120

Query  121  FLALQDNSTVMYLCSAEYNPQREHTICATDPTLAVDWPLV--DGAAP--SLSDRDAAAPS  176
            FL+L+D+STV+YLCS  Y P REH +   DP + +DWP+V  DG++   +LSD+D AAP+
Sbjct  121  FLSLEDDSTVIYLCSTGYAPDREHEVSPLDPGIGIDWPVVGRDGSSLQWTLSDKDLAAPT  180

Query  177  FEDVRASGLLPRWEQ  191
             +  R +GLLP + +
Sbjct  181  LQQARDAGLLPVYRE  195


>gi|269957344|ref|YP_003327133.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Xylanimonas cellulosilytica 
DSM 15894]
 gi|269306025|gb|ACZ31575.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Xylanimonas cellulosilytica 
DSM 15894]
Length=205

 Score =  244 bits (624),  Expect = 4e-63, Method: Compositional matrix adjust.
 Identities = 120/205 (59%), Positives = 142/205 (70%), Gaps = 4/205 (1%)

Query  1    MKARELDVPGAWEITPTIHVDSRGLFFEWLTDHGFRAFAGHSLDVRQVNCSVSSAGVLRG  60
            M  R L + GAWE+TP    D RG+F EW     F    GH +D+RQ N SVS+AGVLRG
Sbjct  1    MDIRALKIEGAWELTPRQFGDDRGVFLEWFKGDAFAEAVGHGIDLRQANLSVSAAGVLRG  60

Query  61   LHFAQLPPSQAKYVTCVSGSVFDVVVDIREGSPTFGRWDSVLLDDQDRRTIYVSEGLAHG  120
            +HFA +PPSQAKYVTCV G+V DVVVDIR GSPT+G+WDSVLLDD DRR IY+SEGL H 
Sbjct  61   VHFADVPPSQAKYVTCVKGAVLDVVVDIRVGSPTYGQWDSVLLDDVDRRAIYLSEGLGHA  120

Query  121  FLALQDNSTVMYLCSAEYNPQREHTICATDPTLAVDWPLV--DGA--APSLSDRDAAAPS  176
            F +L+D STV YLCSA Y P REH I   DP + + WP    DG+  AP LSD+DAAAP+
Sbjct  121  FCSLEDGSTVTYLCSAPYAPGREHGIHPLDPEIGIVWPTTGRDGSPLAPLLSDKDAAAPT  180

Query  177  FEDVRASGLLPRWEQTQRFIGEMRG  201
              + R  GLLP W+  Q F   +RG
Sbjct  181  LAEAREQGLLPTWDAVQEFRASLRG  205


>gi|296130190|ref|YP_003637440.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Cellulomonas flavigena 
DSM 20109]
 gi|296022005|gb|ADG75241.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Cellulomonas flavigena 
DSM 20109]
Length=210

 Score =  243 bits (620),  Expect = 1e-62, Method: Compositional matrix adjust.
 Identities = 115/204 (57%), Positives = 143/204 (71%), Gaps = 4/204 (1%)

Query  1    MKARELDVPGAWEITPTIHVDSRGLFFEWLTDHGFRAFAGHSLDVRQVNCSVSSAGVLRG  60
            M  REL VPGAWEITP  H D RG+F E+     F    GH+ D++Q NCSVS+AGVLRG
Sbjct  1    MHYRELSVPGAWEITPKQHGDPRGVFLEYFKGGPFAEATGHAFDLQQANCSVSAAGVLRG  60

Query  61   LHFAQLPPSQAKYVTCVSGSVFDVVVDIREGSPTFGRWDSVLLDDQDRRTIYVSEGLAHG  120
            +HFA +PP QAKYVTC  G+V DVVVDIR GSPTFGRWD+VLLDD DRR IY+ EGL H 
Sbjct  61   IHFADVPPGQAKYVTCAKGAVLDVVVDIRVGSPTFGRWDTVLLDDTDRRAIYLGEGLGHA  120

Query  121  FLALQDNSTVMYLCSAEYNPQREHTICATDPTLAVDWPLV--DGA--APSLSDRDAAAPS  176
            F++L+D+STV+YLCS  Y P REH I   DP + + WP    DG+   P LS++D AAP+
Sbjct  121  FMSLEDDSTVLYLCSTGYAPGREHGIHPLDPEIGITWPTTARDGSPLTPQLSEKDTAAPT  180

Query  177  FEDVRASGLLPRWEQTQRFIGEMR  200
              + RA+GLLP     + ++  +R
Sbjct  181  LAEARAAGLLPDAAVVEEYVQGLR  204


>gi|169630860|ref|YP_001704509.1| dTDP-4-dehydrorhamnose 3,5-epimerase RmlC [Mycobacterium abscessus 
ATCC 19977]
 gi|169242827|emb|CAM63855.1| DTDP-4-dehydrorhamnose 3,5-epimerase RmlC [Mycobacterium abscessus]
Length=205

 Score =  239 bits (610),  Expect = 2e-61, Method: Compositional matrix adjust.
 Identities = 119/205 (59%), Positives = 145/205 (71%), Gaps = 4/205 (1%)

Query  1    MKARELDVPGAWEITPTIHVDSRGLFFEWLTDHGFRAFAGHSLDVRQVNCSVSSAGVLRG  60
            MK REL VPG++EITP  H DSRG+F E           GH  +++Q NCSVS+AG LRG
Sbjct  1    MKIRELSVPGSFEITPVQHHDSRGVFLELFKGPALAEAIGHPFELQQANCSVSAAGSLRG  60

Query  61   LHFAQLPPSQAKYVTCVSGSVFDVVVDIREGSPTFGRWDSVLLDDQDRRTIYVSEGLAHG  120
            +HFA +PP QAKYVTC++GSV+DVVVDIR GSPTFG WD+VLLD +DRR +YV EG+ HG
Sbjct  61   IHFADVPPGQAKYVTCLTGSVYDVVVDIRVGSPTFGAWDAVLLDPRDRRAVYVPEGVGHG  120

Query  121  FLALQDNSTVMYLCSAEYNPQREHTICATDPTLAVDWPL--VDGAAPSL--SDRDAAAPS  176
            FLAL+D+STV+YLCSA Y P REH I   DPT+ + WP    DG   SL  S++D AAPS
Sbjct  121  FLALEDDSTVVYLCSAGYAPGREHGIDPLDPTVGIQWPTRRPDGTELSLLVSEKDGAAPS  180

Query  177  FEDVRASGLLPRWEQTQRFIGEMRG  201
              D R SGLLP   + Q F+  + G
Sbjct  181  LLDARDSGLLPDAAEVQAFLDGLSG  205


>gi|226303737|ref|YP_002763695.1| dTDP-6-deoxy-D-xylo-4-hexulose 3,5-epimerase [Rhodococcus erythropolis 
PR4]
 gi|226182852|dbj|BAH30956.1| dTDP-6-deoxy-D-xylo-4-hexulose 3,5-epimerase [Rhodococcus erythropolis 
PR4]
Length=197

 Score =  239 bits (609),  Expect = 2e-61, Method: Compositional matrix adjust.
 Identities = 111/192 (58%), Positives = 141/192 (74%), Gaps = 4/192 (2%)

Query  4    RELDVPGAWEITPTIHVDSRGLFFEWLTDHGFRAFAGHSLDVRQVNCSVSSAGVLRGLHF  63
            REL VPGAWE TP    D RG+F EW  + GF    G +LD++Q NCSVS+AGVLRG+HF
Sbjct  5    RELKVPGAWEFTPKQFGDDRGVFLEWFREPGFSEITGRTLDLQQANCSVSAAGVLRGIHF  64

Query  64   AQLPPSQAKYVTCVSGSVFDVVVDIREGSPTFGRWDSVLLDDQDRRTIYVSEGLAHGFLA  123
            A +PP QAKYVTCV G++ D+ VD+R GSPTFG+WDSVLLDD DRR I++SEGL H FL+
Sbjct  65   ADVPPGQAKYVTCVKGAILDIAVDLRVGSPTFGQWDSVLLDDVDRRAIFLSEGLGHAFLS  124

Query  124  LQDNSTVMYLCSAEYNPQREHTICATDPTLAVDWPLVDGAAP----SLSDRDAAAPSFED  179
            L+DNSTV+YLCS  Y P+REH +   DP +A+DWP V  +      +LS +D AAPS +D
Sbjct  125  LEDNSTVVYLCSTGYAPEREHEVHPLDPDIAIDWPTVGRSGEPLNITLSAKDTAAPSLQD  184

Query  180  VRASGLLPRWEQ  191
              ++GLLP + +
Sbjct  185  AVSAGLLPTFGE  196


>gi|332671010|ref|YP_004454018.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Cellulomonas fimi ATCC 
484]
 gi|332340048|gb|AEE46631.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Cellulomonas fimi ATCC 
484]
Length=206

 Score =  234 bits (598),  Expect = 4e-60, Method: Compositional matrix adjust.
 Identities = 118/204 (58%), Positives = 138/204 (68%), Gaps = 4/204 (1%)

Query  1    MKARELDVPGAWEITPTIHVDSRGLFFEWLTDHGFRAFAGHSLDVRQVNCSVSSAGVLRG  60
            M+ REL VPGA EITP    D RG+F EW     F    GH L + Q NCSVS+AGVLRG
Sbjct  1    MQVRELSVPGALEITPRQFADDRGVFLEWFAGAAFGEAVGHDLTLAQANCSVSAAGVLRG  60

Query  61   LHFAQLPPSQAKYVTCVSGSVFDVVVDIREGSPTFGRWDSVLLDDQDRRTIYVSEGLAHG  120
            +HFA +PP QAKYVTC  G+V DVVVDIR GSPTFG+WDSVLLDD DRR IYV EGL H 
Sbjct  61   IHFADVPPGQAKYVTCARGAVLDVVVDIRVGSPTFGQWDSVLLDDVDRRAIYVPEGLGHA  120

Query  121  FLALQDNSTVMYLCSAEYNPQREHTICATDPTLAVDWPLV--DG--AAPSLSDRDAAAPS  176
            F++L+D+STV+YLCSA Y P REH +   D  LA+ WP    DG    P LS +DA APS
Sbjct  121  FMSLEDDSTVLYLCSAPYAPGREHGVHPLDADLAIAWPTQGRDGRPLTPLLSPKDAEAPS  180

Query  177  FEDVRASGLLPRWEQTQRFIGEMR  200
              D +A GLLP     + F+  +R
Sbjct  181  LADAQAQGLLPVAADVEAFVAGLR  204


>gi|269794231|ref|YP_003313686.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Sanguibacter keddieii DSM 
10542]
 gi|269096416|gb|ACZ20852.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Sanguibacter keddieii DSM 
10542]
Length=204

 Score =  234 bits (598),  Expect = 4e-60, Method: Compositional matrix adjust.
 Identities = 115/204 (57%), Positives = 142/204 (70%), Gaps = 4/204 (1%)

Query  1    MKARELDVPGAWEITPTIHVDSRGLFFEWLTDHGFRAFAGHSLDVRQVNCSVSSAGVLRG  60
            M+ R+L VPGAWEITP    D RG+F EW     F   AGH+L + Q N SVS+AGVLRG
Sbjct  1    MEFRQLSVPGAWEITPKQFGDPRGVFLEWFKGAPFAEEAGHALALAQANLSVSAAGVLRG  60

Query  61   LHFAQLPPSQAKYVTCVSGSVFDVVVDIREGSPTFGRWDSVLLDDQDRRTIYVSEGLAHG  120
            +HFA +PP QAKYVTC  G+V DVVVDIR GSPT+G+WDSVLLDD DRR IY+SEGL H 
Sbjct  61   IHFADVPPGQAKYVTCARGAVLDVVVDIRVGSPTYGQWDSVLLDDVDRRAIYLSEGLGHA  120

Query  121  FLALQDNSTVMYLCSAEYNPQREHTICATDPTLAVDWPLV--DGAAP--SLSDRDAAAPS  176
            FL+L+D+STV+YLCSA Y P REH I   DP + +DWP    DG+     LS++D+ AP+
Sbjct  121  FLSLEDDSTVLYLCSAPYAPGREHGIHPLDPEIGIDWPTTARDGSPLQYELSEKDSVAPT  180

Query  177  FEDVRASGLLPRWEQTQRFIGEMR  200
              +   SGLLP   +   F+  +R
Sbjct  181  LAEALQSGLLPSANEVAEFVAGLR  204


>gi|325673208|ref|ZP_08152901.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Rhodococcus equi ATCC 33707]
 gi|325556043|gb|EGD25712.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Rhodococcus equi ATCC 33707]
Length=209

 Score =  234 bits (597),  Expect = 6e-60, Method: Compositional matrix adjust.
 Identities = 109/203 (54%), Positives = 143/203 (71%), Gaps = 4/203 (1%)

Query  1    MKARELDVPGAWEITPTIHVDSRGLFFEWLTDHGFRAFAGHSLDVRQVNCSVSSAGVLRG  60
            M+ REL + GAWE+TP    D RG+F EW  +  F    GH LD++Q NCSVS+AGVLRG
Sbjct  3    MEYRELAISGAWEVTPKQFGDDRGVFLEWFKEPTFSEAVGHPLDLQQANCSVSAAGVLRG  62

Query  61   LHFAQLPPSQAKYVTCVSGSVFDVVVDIREGSPTFGRWDSVLLDDQDRRTIYVSEGLAHG  120
            +HFA +PP QAKYVTC+ G+V DVVVDIR GSPTFG+WDSVLLDD DRR +Y+SEGL H 
Sbjct  63   IHFADVPPGQAKYVTCLKGAVLDVVVDIRVGSPTFGKWDSVLLDDVDRRAVYLSEGLGHA  122

Query  121  FLALQDNSTVMYLCSAEYNPQREHTICATDPTLAVDWPLVDGAAPS----LSDRDAAAPS  176
            FL+L+D+STV+YLCS+ Y P REH I   DP + ++WP +  +       LS++D  APS
Sbjct  123  FLSLEDSSTVVYLCSSGYAPGREHGINPLDPAIGIEWPKLSRSGQPLEFVLSEKDCEAPS  182

Query  177  FEDVRASGLLPRWEQTQRFIGEM  199
              +   S LLP ++  + ++ E+
Sbjct  183  LAEAGTSRLLPSYDDIKEYLDEL  205


>gi|269219067|ref|ZP_06162921.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Actinomyces sp. oral taxon 
848 str. F0332]
 gi|269211214|gb|EEZ77554.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Actinomyces sp. oral taxon 
848 str. F0332]
Length=203

 Score =  234 bits (596),  Expect = 7e-60, Method: Compositional matrix adjust.
 Identities = 112/203 (56%), Positives = 140/203 (69%), Gaps = 4/203 (1%)

Query  1    MKARELDVPGAWEITPTIHVDSRGLFFEWLTDHGFRAFAGHSLDVRQVNCSVSSAGVLRG  60
            M+ REL +PGAWEITP    D RG+F E      F    GH LD+RQ N SVS AG +RG
Sbjct  1    MQIRELKIPGAWEITPKQFPDDRGVFLEAYKSSAFEKAVGHRLDLRQANVSVSKAGTVRG  60

Query  61   LHFAQLPPSQAKYVTCVSGSVFDVVVDIREGSPTFGRWDSVLLDDQDRRTIYVSEGLAHG  120
            +HFA +PPSQAKYV C  G+V D  +DIR GSPTFG+WDSVLLDD DRR IY+SEGL H 
Sbjct  61   IHFADVPPSQAKYVVCPRGAVLDFAIDIRVGSPTFGQWDSVLLDDVDRRAIYLSEGLGHA  120

Query  121  FLALQDNSTVMYLCSAEYNPQREHTICATDPTLAVDWPLV--DGAAPS--LSDRDAAAPS  176
            F+AL+D+STVMY+CSAEY P REH +    P +A+D+P    DG+     LS++D AAP+
Sbjct  121  FIALEDDSTVMYMCSAEYAPGREHGVSPVCPEVALDFPKTGRDGSPLELLLSEKDTAAPN  180

Query  177  FEDVRASGLLPRWEQTQRFIGEM  199
              + R SGLLP W+  Q ++  +
Sbjct  181  LAEARESGLLPTWDAVQAYLATL  203


>gi|315502242|ref|YP_004081129.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Micromonospora sp. L5]
 gi|315408861|gb|ADU06978.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Micromonospora sp. L5]
Length=202

 Score =  229 bits (583),  Expect = 2e-58, Method: Compositional matrix adjust.
 Identities = 109/195 (56%), Positives = 136/195 (70%), Gaps = 3/195 (1%)

Query  1    MKARELDVPGAWEITPTIHVDSRGLFFEWLTDHGFRAFAGHSLDVRQVNCSVSSAGVLRG  60
            MK R L + GAWE+TP  H D+RGLF EW          G  L + Q N SVS+ GV+RG
Sbjct  1    MKIRPLSIEGAWEVTPRRHGDARGLFLEWYRFDRLAEAVGRPLRLAQANLSVSARGVVRG  60

Query  61   LHFAQLPPSQAKYVTCVSGSVFDVVVDIREGSPTFGRWDSVLLDDQDRRTIYVSEGLAHG  120
            +HFA +PP QAKYVTCV G+V DVVVD+R GSPT+GRW++V LDD DRR +Y++EGL HG
Sbjct  61   IHFADVPPGQAKYVTCVRGAVLDVVVDVRAGSPTYGRWEAVRLDDTDRRAVYLAEGLGHG  120

Query  121  FLALQDNSTVMYLCSAEYNPQREHTICATDPTLAVDWPLVDGAAPSLSDRDAAAPSFEDV  180
            F AL D++T+ YLCSA YNP  EHT+   DP L +DWP    A P LS+RDAAAP   + 
Sbjct  121  FCALTDDATLSYLCSATYNPAAEHTVHPLDPDLGIDWP---AATPLLSERDAAAPRLAEA  177

Query  181  RASGLLPRWEQTQRF  195
            RA+GLLP ++  + F
Sbjct  178  RAAGLLPGYDACRSF  192


>gi|302865678|ref|YP_003834315.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Micromonospora aurantiaca 
ATCC 27029]
 gi|302568537|gb|ADL44739.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Micromonospora aurantiaca 
ATCC 27029]
Length=202

 Score =  229 bits (583),  Expect = 2e-58, Method: Compositional matrix adjust.
 Identities = 109/195 (56%), Positives = 136/195 (70%), Gaps = 3/195 (1%)

Query  1    MKARELDVPGAWEITPTIHVDSRGLFFEWLTDHGFRAFAGHSLDVRQVNCSVSSAGVLRG  60
            MK R L + GAWE+TP  H D+RGLF EW          G  L + Q N SVS+ GV+RG
Sbjct  1    MKIRPLSIEGAWEVTPRRHGDARGLFLEWYRFDRLAEAVGRPLRLAQANLSVSARGVVRG  60

Query  61   LHFAQLPPSQAKYVTCVSGSVFDVVVDIREGSPTFGRWDSVLLDDQDRRTIYVSEGLAHG  120
            +HFA +PP QAKYVTCV G+V DVVVD+R GSPT+GRW++V LDD DRR +Y++EGL HG
Sbjct  61   IHFADVPPGQAKYVTCVRGAVLDVVVDVRAGSPTYGRWEAVRLDDTDRRAVYLTEGLGHG  120

Query  121  FLALQDNSTVMYLCSAEYNPQREHTICATDPTLAVDWPLVDGAAPSLSDRDAAAPSFEDV  180
            F AL D++T+ YLCSA YNP  EHT+   DP L +DWP    A P LS+RDAAAP   + 
Sbjct  121  FCALTDDATLSYLCSATYNPAAEHTVHPLDPDLGIDWP---AATPLLSERDAAAPRLAEA  177

Query  181  RASGLLPRWEQTQRF  195
            RA+GLLP ++  + F
Sbjct  178  RAAGLLPGYDACRSF  192


>gi|297194408|ref|ZP_06911806.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Streptomyces pristinaespiralis 
ATCC 25486]
 gi|197718783|gb|EDY62691.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Streptomyces pristinaespiralis 
ATCC 25486]
Length=210

 Score =  228 bits (581),  Expect = 4e-58, Method: Compositional matrix adjust.
 Identities = 109/196 (56%), Positives = 136/196 (70%), Gaps = 2/196 (1%)

Query  4    RELDVPGAWEITPTIHVDSRGLFFEWLTDHGFRAFAGHSLDVRQVNCSVSSAGVLRGLHF  63
            R+L + GAW   P I  DSRG F EW  +  F   AGH L + Q NCSVSS G LRG+HF
Sbjct  13   RQLSITGAWVHEPKIFPDSRGSFHEWFKEGDFAKAAGHGLRLAQANCSVSSRGTLRGVHF  72

Query  64   AQLPPSQAKYVTCVSGSVFDVVVDIREGSPTFGRWDSVLLDDQDRRTIYVSEGLAHGFLA  123
            A +PPSQAKYV CV G+V DVVVDIR GSPTFG+W++V LDD D R++Y+SEGL H F+A
Sbjct  73   ADVPPSQAKYVKCVRGTVLDVVVDIRVGSPTFGKWEAVRLDDVDHRSVYLSEGLGHAFMA  132

Query  124  LQDNSTVMYLCSAEYNPQREHTICATDPTLAVDWPLVDGAAPSLSDRDAAAPSFEDVRAS  183
            L D++TV+YLCS  Y P+REH I   DP L ++WP      P LSD+DAAAPS  +    
Sbjct  133  LTDDATVVYLCSEGYAPEREHGIDPLDPGLGIEWP--QDITPVLSDKDAAAPSLAEAERQ  190

Query  184  GLLPRWEQTQRFIGEM  199
            GLLPR+E+ + +  E+
Sbjct  191  GLLPRYEECRAYYAEL  206


>gi|238560602|gb|ACR46366.1| TDP-4-dehydrorhamnose 3,5-epimerase [Streptomyces peucetius ATCC 
27952]
Length=199

 Score =  227 bits (579),  Expect = 7e-58, Method: Compositional matrix adjust.
 Identities = 106/197 (54%), Positives = 137/197 (70%), Gaps = 2/197 (1%)

Query  4    RELDVPGAWEITPTIHVDSRGLFFEWLTDHGFRAFAGHSLDVRQVNCSVSSAGVLRGLHF  63
            R+L + GAW   P I  DSRG F EW     F   AGH L++ Q NCSVSS G LRG+HF
Sbjct  2    RQLSIAGAWVHEPKIFPDSRGSFHEWFRAPEFTEAAGHGLNLAQANCSVSSRGTLRGIHF  61

Query  64   AQLPPSQAKYVTCVSGSVFDVVVDIREGSPTFGRWDSVLLDDQDRRTIYVSEGLAHGFLA  123
            A +PPSQAKYV CV G+V DV+VDIR GSPTFG+W++V LDD D  ++Y+SEGL H F+A
Sbjct  62   ADVPPSQAKYVKCVRGAVLDVIVDIRVGSPTFGQWEAVRLDDADHHSVYLSEGLGHAFMA  121

Query  124  LQDNSTVMYLCSAEYNPQREHTICATDPTLAVDWPLVDGAAPSLSDRDAAAPSFEDVRAS  183
            L D++TV+YLCS  Y+P REH I   DP L ++WP  +G  P LS++D AAP+  + +A 
Sbjct  122  LTDDATVVYLCSEGYSPGREHGITPLDPELGIEWP--EGITPLLSEKDEAAPTLAEAKAQ  179

Query  184  GLLPRWEQTQRFIGEMR  200
            GLLP +E  Q +  ++R
Sbjct  180  GLLPSYEDCQAYYAQLR  196


>gi|315654769|ref|ZP_07907674.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Mobiluncus curtisii ATCC 
51333]
 gi|315490730|gb|EFU80350.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Mobiluncus curtisii ATCC 
51333]
Length=205

 Score =  222 bits (566),  Expect = 2e-56, Method: Compositional matrix adjust.
 Identities = 107/203 (53%), Positives = 136/203 (67%), Gaps = 4/203 (1%)

Query  1    MKARELDVPGAWEITPTIHVDSRGLFFEWLTDHGFRAFAGHSLDVRQVNCSVSSAGVLRG  60
            M+ REL + GAWEITP    D RG F E      F    GH L++ Q NCS+S AGV+RG
Sbjct  1    MEYRELKIAGAWEITPKQFPDERGAFMEMYKMGEFAEVVGHPLNLVQANCSISKAGVVRG  60

Query  61   LHFAQLPPSQAKYVTCVSGSVFDVVVDIREGSPTFGRWDSVLLDDQDRRTIYVSEGLAHG  120
            +HFA++PPSQAKYV C  G+V D  VDIR GSPTFG+WDSVLL+ + RR IY+SEGL H 
Sbjct  61   IHFAEVPPSQAKYVMCPRGAVLDFAVDIRVGSPTFGQWDSVLLEGEHRRAIYLSEGLGHC  120

Query  121  FLALQDNSTVMYLCSAEYNPQREHTICATDPTLAVDWPLVDGAAPS----LSDRDAAAPS  176
            F+AL+DNSTV+YLCS  YNP  EH +   DP +A+ WP  D A       LS++D AAPS
Sbjct  121  FVALEDNSTVVYLCSEGYNPGHEHGVSPVDPEVALKWPDHDLAGRPLEVILSEKDTAAPS  180

Query  177  FEDVRASGLLPRWEQTQRFIGEM  199
              + R  GLLP +++T  ++  +
Sbjct  181  LTEAREQGLLPDYQETLDYVASL  203


>gi|315657310|ref|ZP_07910192.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Mobiluncus curtisii subsp. 
holmesii ATCC 35242]
 gi|315491782|gb|EFU81391.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Mobiluncus curtisii subsp. 
holmesii ATCC 35242]
Length=205

 Score =  222 bits (565),  Expect = 3e-56, Method: Compositional matrix adjust.
 Identities = 107/203 (53%), Positives = 137/203 (68%), Gaps = 4/203 (1%)

Query  1    MKARELDVPGAWEITPTIHVDSRGLFFEWLTDHGFRAFAGHSLDVRQVNCSVSSAGVLRG  60
            M+ REL + GAWEITP    D RG F E      F    GH L++ Q NCS+S AGV+RG
Sbjct  1    MEYRELKIAGAWEITPKQFPDERGAFMEMYKMGEFAEVVGHPLNLVQANCSISKAGVVRG  60

Query  61   LHFAQLPPSQAKYVTCVSGSVFDVVVDIREGSPTFGRWDSVLLDDQDRRTIYVSEGLAHG  120
            +HFA++PPSQAKYV C  G+V D  VDIR GSPTFG+WDSVLL+ + RR IY+SEGL H 
Sbjct  61   IHFAEVPPSQAKYVMCPRGAVLDFAVDIRVGSPTFGQWDSVLLEGEHRRAIYLSEGLGHC  120

Query  121  FLALQDNSTVMYLCSAEYNPQREHTICATDPTLAVDWPLVDGAAPS----LSDRDAAAPS  176
            F+AL+D+STV+YLCS  YNP REH +   DP +A+ WP  D A       LS++D AAPS
Sbjct  121  FVALEDDSTVVYLCSEGYNPGREHGVSPVDPEVALKWPDHDLAGRPLEVILSEKDTAAPS  180

Query  177  FEDVRASGLLPRWEQTQRFIGEM  199
              + R  GLLP +++T  ++  +
Sbjct  181  LTEAREQGLLPDYQETLDYVASL  203


>gi|343924256|ref|ZP_08763816.1| dTDP-6-deoxy-D-xylo-4-hexulose 3,5-epimerase [Gordonia alkanivorans 
NBRC 16433]
 gi|343765825|dbj|GAA10742.1| dTDP-6-deoxy-D-xylo-4-hexulose 3,5-epimerase [Gordonia alkanivorans 
NBRC 16433]
Length=208

 Score =  222 bits (565),  Expect = 3e-56, Method: Compositional matrix adjust.
 Identities = 111/205 (55%), Positives = 135/205 (66%), Gaps = 4/205 (1%)

Query  1    MKARELDVPGAWEITPTIHVDSRGLFFEWLTDHGFRAFAGHSLDVRQVNCSVSSAGVLRG  60
            MK R L + GAWE+TP  H D+RGLF E           GH  D+ QVN SVS+AGVLRG
Sbjct  1    MKVRPLTIDGAWELTPVQHGDARGLFAEAFKGDLLAEVIGHRFDLAQVNLSVSAAGVLRG  60

Query  61   LHFAQLPPSQAKYVTCVSGSVFDVVVDIREGSPTFGRWDSVLLDDQDRRTIYVSEGLAHG  120
            +HFA +PP QAKYVTC +G++ DV+VDIR GSPTFG +D+VLLDD DRR +Y+SEGL H 
Sbjct  61   VHFADVPPGQAKYVTCATGAILDVIVDIRVGSPTFGTYDTVLLDDVDRRAVYLSEGLGHA  120

Query  121  FLALQDNSTVMYLCSAEYNPQREHTICATDPTLAVDWPL--VDGA--APSLSDRDAAAPS  176
            F AL DNSTV YLCS  YNP  EH I   DP L ++WP    DG+     LS++D AAP 
Sbjct  121  FCALADNSTVTYLCSTGYNPSGEHGINPLDPELGIEWPTHARDGSPLEYELSEKDTAAPG  180

Query  177  FEDVRASGLLPRWEQTQRFIGEMRG  201
              + R SGLLP  +    F+  + G
Sbjct  181  LTEARESGLLPDHDDVTAFLRGLAG  205


>gi|111225335|ref|YP_716129.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Frankia alni ACN14a]
 gi|111152867|emb|CAJ64614.1| dTDP-4-dehydrorhamnose 3,5-epimerase (dTDP-4-keto-6-deoxyglucose 
3,5-epimerase) (dTDP-L-rhamnose synthetase) [Frankia alni 
ACN14a]
Length=208

 Score =  222 bits (565),  Expect = 3e-56, Method: Compositional matrix adjust.
 Identities = 109/201 (55%), Positives = 132/201 (66%), Gaps = 2/201 (0%)

Query  1    MKARELDVPGAWEITPTIHVDSRGLFFEWLTDHGFRAFAGHSLDVRQVNCSVSSAGVLRG  60
            M+  EL VP AW  TP  H DSRG F EW          GH L + Q N SVS AG LRG
Sbjct  1    MEISELSVPDAWVFTPRQHSDSRGTFLEWFRSDALAEVVGHPLTLSQANHSVSRAGTLRG  60

Query  61   LHFAQLPPSQAKYVTCVSGSVFDVVVDIREGSPTFGRWDSVLLDDQDRRTIYVSEGLAHG  120
            +H+AQ+PPSQAKYVTCV G V D VVDIR GSPTFG + +VLLDD DRR +YVSEGL H 
Sbjct  61   VHYAQVPPSQAKYVTCVRGRVLDCVVDIRTGSPTFGTFAAVLLDDVDRRGLYVSEGLGHA  120

Query  121  FLALQDNSTVMYLCSAEYNPQREHTICATDPTLAVDWPLVDGAAPSLSDRDAAAPSFEDV  180
            F+AL D++ + YLCS  Y P REH +   DP LA+ WP  D   P LS++DAAAPS ++ 
Sbjct  121  FMALTDDAAISYLCSTPYTPGREHGVDPLDPDLALPWP--DDLTPLLSEKDAAAPSLKEA  178

Query  181  RASGLLPRWEQTQRFIGEMRG  201
             ++GLLP +   + F  E+R 
Sbjct  179  ESAGLLPTYRDCRAFYDELRA  199


>gi|111021079|ref|YP_704051.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Rhodococcus jostii RHA1]
 gi|110820609|gb|ABG95893.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Rhodococcus jostii RHA1]
Length=195

 Score =  221 bits (563),  Expect = 5e-56, Method: Compositional matrix adjust.
 Identities = 106/193 (55%), Positives = 135/193 (70%), Gaps = 4/193 (2%)

Query  1    MKARELDVPGAWEITPTIHVDSRGLFFEWLTDHGFRAFAGHSLDVRQVNCSVSSAGVLRG  60
            M+ R+L VPGAWEITP    D RG+F EW     F A  GHSL++ Q NCSVS+AGVLRG
Sbjct  1    MEYRKLKVPGAWEITPRQFGDDRGVFLEWFKGSEFEAAVGHSLELAQANCSVSAAGVLRG  60

Query  61   LHFAQLPPSQAKYVTCVSGSVFDVVVDIREGSPTFGRWDSVLLDDQDRRTIYVSEGLAHG  120
            +HF   PP QAKYVTCV G+  DV+VD+R GSP FG+WDSVL+DD DRR +Y+  G+ H 
Sbjct  61   IHFTDNPPGQAKYVTCVKGAFLDVIVDLRVGSPMFGQWDSVLIDDADRRAVYLPAGVGHA  120

Query  121  FLALQDNSTVMYLCSAEYNPQREHTICATDPTLAVDWPLV--DGAAPS--LSDRDAAAPS  176
             L+L+D STVMYLCS EY P  +H +   DP L +DWP V  DG+  +  LS++D+AAPS
Sbjct  121  ILSLEDASTVMYLCSIEYTPALDHDLHPLDPELGIDWPTVGRDGSPLTFQLSEKDSAAPS  180

Query  177  FEDVRASGLLPRW  189
             +    +G+LP +
Sbjct  181  LQQALDAGVLPTF  193


>gi|158056586|emb|CAP11386.1| 3,5-epimerase [Streptomyces olivaceus]
Length=201

 Score =  220 bits (561),  Expect = 8e-56, Method: Compositional matrix adjust.
 Identities = 102/195 (53%), Positives = 134/195 (69%), Gaps = 2/195 (1%)

Query  1    MKARELDVPGAWEITPTIHVDSRGLFFEWLTDHGFRAFAGHSLDVRQVNCSVSSAGVLRG  60
            MK   L + GAWE  P    D+RGLF EW          GH L+++Q N SVSSAGV+RG
Sbjct  1    MKVNPLGIEGAWEFVPQQFGDARGLFLEWYKAERMAEAVGHPLNLKQGNLSVSSAGVVRG  60

Query  61   LHFAQLPPSQAKYVTCVSGSVFDVVVDIREGSPTFGRWDSVLLDDQDRRTIYVSEGLAHG  120
            +HFA +PP QAKYVTCV G+V D++VD+R GSPTFG+W++V LDD+DR+ +Y+SEGL HG
Sbjct  61   IHFADVPPGQAKYVTCVRGAVLDIIVDVRVGSPTFGKWEAVRLDDKDRKAVYLSEGLGHG  120

Query  121  FLALQDNSTVMYLCSAEYNPQREHTICATDPTLAVDWPLVDGAAPSLSDRDAAAPSFEDV  180
            F AL D++TV YLCS  Y P+RE T+   DP + ++WP VDG  P LS +DA  P+    
Sbjct  121  FCALTDDATVTYLCSEGYAPERERTVYPLDPEIGIEWP-VDG-EPELSAKDAQGPTLAQA  178

Query  181  RASGLLPRWEQTQRF  195
            R +G+LP +E+   F
Sbjct  179  REAGILPVYEECVAF  193


>gi|227875184|ref|ZP_03993326.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Mobiluncus mulieris ATCC 
35243]
 gi|227844089|gb|EEJ54256.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Mobiluncus mulieris ATCC 
35243]
Length=204

 Score =  219 bits (559),  Expect = 1e-55, Method: Compositional matrix adjust.
 Identities = 108/203 (54%), Positives = 134/203 (67%), Gaps = 4/203 (1%)

Query  1    MKARELDVPGAWEITPTIHVDSRGLFFEWLTDHGFRAFAGHSLDVRQVNCSVSSAGVLRG  60
            M+ REL VPGAWEITP    D RG F E      F    GH L + Q NCS+S AGV+RG
Sbjct  1    MEYRELKVPGAWEITPKQFPDERGAFMEMYKLGEFAKVVGHPLSLVQANCSISKAGVVRG  60

Query  61   LHFAQLPPSQAKYVTCVSGSVFDVVVDIREGSPTFGRWDSVLLDDQDRRTIYVSEGLAHG  120
            +HFA++PPSQAKYV C  G+V D  VDIR GSPTFG WDSVLL+ + RR IY+SEGL H 
Sbjct  61   IHFAEVPPSQAKYVMCPRGAVLDFAVDIRVGSPTFGAWDSVLLEGEHRRAIYLSEGLGHC  120

Query  121  FLALQDNSTVMYLCSAEYNPQREHTICATDPTLAVDWPLVDGAAPS----LSDRDAAAPS  176
            F+AL+D+STV+YLCS  YNP REH +   DP + + +P  D A       LS++D AAPS
Sbjct  121  FVALEDDSTVVYLCSEGYNPGREHGVSPVDPEVGLVFPDKDLAGRPLKVLLSEKDTAAPS  180

Query  177  FEDVRASGLLPRWEQTQRFIGEM  199
              + R  GLLP ++ T  +I  +
Sbjct  181  LAEAREQGLLPEYQATLDYIASL  203


>gi|298346186|ref|YP_003718873.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Mobiluncus curtisii ATCC 
43063]
 gi|298236247|gb|ADI67379.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Mobiluncus curtisii ATCC 
43063]
Length=205

 Score =  219 bits (559),  Expect = 1e-55, Method: Compositional matrix adjust.
 Identities = 107/203 (53%), Positives = 135/203 (67%), Gaps = 4/203 (1%)

Query  1    MKARELDVPGAWEITPTIHVDSRGLFFEWLTDHGFRAFAGHSLDVRQVNCSVSSAGVLRG  60
            M+ REL + GAWEITP    D RG F E      F    GH L++ Q NCS+S AGV+RG
Sbjct  1    MEYRELKIAGAWEITPKQFPDERGAFMEMYKMGEFAEVVGHPLNLVQANCSISKAGVVRG  60

Query  61   LHFAQLPPSQAKYVTCVSGSVFDVVVDIREGSPTFGRWDSVLLDDQDRRTIYVSEGLAHG  120
            +HFA++PPSQAKYV C  G+V D  VDIR GSPTFG+WDSVLL+ + RR IY+SEGL H 
Sbjct  61   IHFAEVPPSQAKYVMCPRGAVLDFAVDIRVGSPTFGQWDSVLLEGEHRRAIYLSEGLGHC  120

Query  121  FLALQDNSTVMYLCSAEYNPQREHTICATDPTLAVDWPLVDGAAPS----LSDRDAAAPS  176
            F+AL+DNSTV+YLCS  YNP REH +   DP +A+ WP  D A       LS++D AAPS
Sbjct  121  FVALEDNSTVVYLCSEGYNPGREHGVSPVDPEVALKWPDHDLAGRPLEVILSEKDTAAPS  180

Query  177  FEDVRASGLLPRWEQTQRFIGEM  199
              + R   LLP ++ T  ++  +
Sbjct  181  LVEAREQDLLPDYQATLDYVASL  203


>gi|226363369|ref|YP_002781151.1| dTDP-6-deoxy-D-xylo-4-hexulose 3,5-epimerase [Rhodococcus opacus 
B4]
 gi|226241858|dbj|BAH52206.1| dTDP-6-deoxy-D-xylo-4-hexulose 3,5-epimerase [Rhodococcus opacus 
B4]
Length=193

 Score =  219 bits (558),  Expect = 2e-55, Method: Compositional matrix adjust.
 Identities = 106/191 (56%), Positives = 132/191 (70%), Gaps = 4/191 (2%)

Query  1    MKARELDVPGAWEITPTIHVDSRGLFFEWLTDHGFRAFAGHSLDVRQVNCSVSSAGVLRG  60
            M+ REL VPGAWEITP    D RG+F EW     F A  GH LD+ Q NCSVS+AGVLRG
Sbjct  1    MEYRELKVPGAWEITPRQFGDDRGVFLEWFKGSEFEAAVGHPLDLAQANCSVSAAGVLRG  60

Query  61   LHFAQLPPSQAKYVTCVSGSVFDVVVDIREGSPTFGRWDSVLLDDQDRRTIYVSEGLAHG  120
            +H+   PP QAKYVTCV G+  DV+VD+R GSP FG+WDSVL+DD DRR +Y+  G+ H 
Sbjct  61   IHYTDNPPGQAKYVTCVKGAFLDVIVDLRVGSPMFGQWDSVLIDDVDRRAVYLPAGVGHA  120

Query  121  FLALQDNSTVMYLCSAEYNPQREHTICATDPTLAVDWPLV--DGAAPS--LSDRDAAAPS  176
             L+L+D STVMYLCS EY P  +H +   DP L +DWP V  DG+  +  LS++D+AAPS
Sbjct  121  ILSLEDASTVMYLCSIEYTPALDHDLHPLDPDLGIDWPTVGRDGSPLTFQLSEKDSAAPS  180

Query  177  FEDVRASGLLP  187
             +    +G LP
Sbjct  181  LQQAIDAGALP  191


>gi|271962204|ref|YP_003336400.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Streptosporangium roseum 
DSM 43021]
 gi|270505379|gb|ACZ83657.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Streptosporangium roseum 
DSM 43021]
Length=216

 Score =  218 bits (556),  Expect = 3e-55, Method: Compositional matrix adjust.
 Identities = 107/182 (59%), Positives = 127/182 (70%), Gaps = 2/182 (1%)

Query  6    LDVPGAWEITPTIHVDSRGLFFEWLTDHGFRAFAGHSLDVRQVNCSVSSAGVLRGLHFAQ  65
            L + G W  TP IH D RG F E           GH LD+ QVNCSVS  GVLRG+HFA 
Sbjct  4    LSIDGTWCHTPRIHADPRGSFLESYRAADLEESVGHRLDLAQVNCSVSRRGVLRGIHFAD  63

Query  66   LPPSQAKYVTCVSGSVFDVVVDIREGSPTFGRWDSVLLDDQDRRTIYVSEGLAHGFLALQ  125
            +PP QAKYVTCVSG+V DVVVDIR GSPTFGRW++VLLDD+ RR +YV+EGL HGFL L 
Sbjct  64   VPPGQAKYVTCVSGAVLDVVVDIRVGSPTFGRWETVLLDDESRRGLYVAEGLGHGFLTLS  123

Query  126  DNSTVMYLCSAEYNPQREHTICATDPTLAVDWPLVDGAAPSLSDRDAAAPSFEDVRASGL  185
            + +TV+YLCS  + P REH I   DP L +DWP   G  P LSD+DAAAP+ ++   +GL
Sbjct  124  EQATVVYLCSRPFTPGREHGIHPLDPALGIDWPA--GVEPLLSDKDAAAPTLKEALDAGL  181

Query  186  LP  187
            LP
Sbjct  182  LP  183


>gi|269978074|ref|ZP_06185024.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Mobiluncus mulieris 28-1]
 gi|269933583|gb|EEZ90167.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Mobiluncus mulieris 28-1]
Length=204

 Score =  218 bits (555),  Expect = 4e-55, Method: Compositional matrix adjust.
 Identities = 107/203 (53%), Positives = 133/203 (66%), Gaps = 4/203 (1%)

Query  1    MKARELDVPGAWEITPTIHVDSRGLFFEWLTDHGFRAFAGHSLDVRQVNCSVSSAGVLRG  60
            M+ REL VPGAWEITP    D RG F E      F    GH L + Q NCS+S AGV+RG
Sbjct  1    MEYRELKVPGAWEITPKQFPDERGAFMEMYKLGEFAKVVGHPLSLVQANCSISKAGVVRG  60

Query  61   LHFAQLPPSQAKYVTCVSGSVFDVVVDIREGSPTFGRWDSVLLDDQDRRTIYVSEGLAHG  120
            +HFA++PPSQAKYV C  G+V D  VDIR GSPTFG WDSVLL+ + RR IY+SEGL H 
Sbjct  61   IHFAEVPPSQAKYVMCPRGAVLDFAVDIRVGSPTFGAWDSVLLEGEHRRAIYLSEGLGHC  120

Query  121  FLALQDNSTVMYLCSAEYNPQREHTICATDPTLAVDWPLVDGAAPS----LSDRDAAAPS  176
            F+AL+D+STV+YLCS  YNP REH +   DP + + +P  D         LS++D AAPS
Sbjct  121  FVALEDDSTVVYLCSEGYNPGREHGVSPVDPEVGLVFPDKDLQGRPLKVLLSEKDTAAPS  180

Query  177  FEDVRASGLLPRWEQTQRFIGEM  199
              + R  GLLP ++ T  +I  +
Sbjct  181  LAEAREQGLLPEYQATLDYIASL  203


>gi|326383444|ref|ZP_08205131.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Gordonia neofelifaecis 
NRRL B-59395]
 gi|326197850|gb|EGD55037.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Gordonia neofelifaecis 
NRRL B-59395]
Length=203

 Score =  218 bits (554),  Expect = 5e-55, Method: Compositional matrix adjust.
 Identities = 111/200 (56%), Positives = 132/200 (66%), Gaps = 4/200 (2%)

Query  1    MKARELDVPGAWEITPTIHVDSRGLFFEWLTDHGFRAFAGHSLDVRQVNCSVSSAGVLRG  60
            M  R L + GAW  TP  H D RGLF E           GH LD+ QVN SVS+AGV+RG
Sbjct  1    MDVRPLTIDGAWAFTPVQHGDGRGLFLEAFKADVVAETIGHRLDLAQVNTSVSAAGVIRG  60

Query  61   LHFAQLPPSQAKYVTCVSGSVFDVVVDIREGSPTFGRWDSVLLDDQDRRTIYVSEGLAHG  120
            +HF+ +PP QAKYVTC +G+V DVVVDIR GSPTFGRWD+VLLDD DRR +Y+SEGL H 
Sbjct  61   VHFSDVPPGQAKYVTCSAGAVLDVVVDIRVGSPTFGRWDAVLLDDLDRRAVYLSEGLGHA  120

Query  121  FLALQDNSTVMYLCSAEYNPQREHTICATDPTLAVDWPLV--DGAAPS--LSDRDAAAPS  176
            F +LQD STV YLCS  Y P  EH I   DP + + WP V  DG+     LS++DAAAPS
Sbjct  121  FCSLQDGSTVTYLCSTGYRPGAEHGIDPMDPEIGIAWPKVARDGSPLEFVLSEKDAAAPS  180

Query  177  FEDVRASGLLPRWEQTQRFI  196
                R SGLLP  +  + F+
Sbjct  181  LVQARESGLLPELDVVREFL  200



Lambda     K      H
   0.321    0.136    0.427 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 220408776486


  Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
    Posted date:  Sep 5, 2011  4:36 AM
  Number of letters in database: 5,219,829,388
  Number of sequences in database:  15,229,318



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40