BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv3481c
Length=229
Score E
Sequences producing significant alignments: (Bits) Value
gi|167967261|ref|ZP_02549538.1| hypothetical integral membrane p... 436 1e-120
gi|148824689|ref|YP_001289443.1| hypothetical protein TBFG_13516... 436 1e-120
gi|15610617|ref|NP_217998.1| integral membrane protein [Mycobact... 435 2e-120
gi|118619230|ref|YP_907562.1| hypothetical protein MUL_4034 [Myc... 300 9e-80
gi|240170027|ref|ZP_04748686.1| hypothetical protein MkanA1_1199... 293 2e-77
gi|342859195|ref|ZP_08715849.1| hypothetical protein MCOL_09963 ... 265 4e-69
gi|296167693|ref|ZP_06849939.1| conserved hypothetical protein [... 260 8e-68
gi|254821950|ref|ZP_05226951.1| hypothetical protein MintA_18602... 259 3e-67
gi|41409905|ref|NP_962741.1| hypothetical protein MAP3807 [Mycob... 253 1e-65
gi|108797453|ref|YP_637650.1| hypothetical protein Mmcs_0473 [My... 253 1e-65
gi|254821951|ref|ZP_05226952.1| hypothetical protein MintA_18607... 253 1e-65
gi|118463847|ref|YP_883964.1| hypothetical protein MAV_4839 [Myc... 253 2e-65
gi|336460231|gb|EGO39134.1| Protein of unknown function (DUF2910... 252 4e-65
gi|254777277|ref|ZP_05218793.1| hypothetical protein MaviaA2_217... 251 4e-65
gi|41409904|ref|NP_962740.1| hypothetical protein MAP3806 [Mycob... 251 7e-65
gi|296167692|ref|ZP_06849938.1| conserved hypothetical protein [... 249 2e-64
gi|342859194|ref|ZP_08715848.1| hypothetical protein MCOL_09958 ... 246 2e-63
gi|336460232|gb|EGO39135.1| Protein of unknown function (DUF2910... 243 1e-62
gi|118465551|ref|YP_883965.1| hypothetical protein MAV_4841 [Myc... 243 2e-62
gi|118472749|ref|YP_885135.1| hypothetical protein MSMEG_0729 [M... 242 3e-62
gi|120401658|ref|YP_951487.1| hypothetical protein Mvan_0642 [My... 241 6e-62
gi|333988984|ref|YP_004521598.1| hypothetical protein JDM601_034... 238 4e-61
gi|145220856|ref|YP_001131534.1| hypothetical protein Mflv_0252 ... 221 6e-56
gi|226309132|ref|YP_002769092.1| hypothetical protein RER_56450 ... 140 2e-31
gi|229491566|ref|ZP_04385387.1| putative membrane protein [Rhodo... 140 2e-31
gi|258652796|ref|YP_003201952.1| hypothetical protein Namu_2611 ... 133 2e-29
gi|226306156|ref|YP_002766116.1| hypothetical protein RER_26690 ... 132 5e-29
gi|111021272|ref|YP_704244.1| hypothetical protein RHA1_ro04295 ... 117 1e-24
gi|229490836|ref|ZP_04384671.1| putative membrane protein [Rhodo... 113 3e-23
gi|296167302|ref|ZP_06849704.1| hypothetical protein HMPREF0591_... 111 9e-23
gi|326384789|ref|ZP_08206465.1| hypothetical protein SCNU_17692 ... 110 1e-22
gi|326780062|ref|ZP_08239327.1| Protein of unknown function DUF2... 107 9e-22
gi|312139219|ref|YP_004006555.1| integral membrane protein [Rhod... 103 3e-20
gi|325673475|ref|ZP_08153166.1| hypothetical protein HMPREF0724_... 103 3e-20
gi|336116079|ref|YP_004570845.1| hypothetical protein MLP_04280 ... 101 9e-20
gi|326384790|ref|ZP_08206466.1| hypothetical protein SCNU_17697 ... 100 2e-19
gi|226363618|ref|YP_002781400.1| hypothetical protein ROP_42080 ... 95.5 5e-18
gi|258651397|ref|YP_003200553.1| hypothetical protein Namu_1157 ... 93.6 2e-17
gi|336120340|ref|YP_004575123.1| hypothetical protein MLP_47060 ... 92.4 4e-17
gi|256395681|ref|YP_003117245.1| hypothetical protein Caci_6558 ... 89.7 3e-16
gi|284042993|ref|YP_003393333.1| hypothetical protein Cwoe_1530 ... 89.7 3e-16
gi|229818717|ref|YP_002880243.1| hypothetical protein Bcav_0216 ... 89.0 5e-16
gi|311896827|dbj|BAJ29235.1| hypothetical protein KSE_34280 [Kit... 87.8 1e-15
gi|169627859|ref|YP_001701508.1| hypothetical protein MAB_0758 [... 86.3 3e-15
gi|229819255|ref|YP_002880781.1| hypothetical protein Bcav_0758 ... 84.7 9e-15
gi|226308704|ref|YP_002768664.1| hypothetical protein RER_52170 ... 78.6 7e-13
gi|229488938|ref|ZP_04382804.1| conserved hypothetical protein [... 76.3 3e-12
gi|271965848|ref|YP_003340044.1| hypothetical protein Sros_4431 ... 74.7 1e-11
gi|302562765|ref|ZP_07315107.1| integral membrane protein [Strep... 73.9 2e-11
gi|315280805|ref|ZP_07869598.1| membrane protein, putative [List... 69.3 4e-10
>gi|167967261|ref|ZP_02549538.1| hypothetical integral membrane protein [Mycobacterium tuberculosis
H37Ra]
gi|253800524|ref|YP_003033525.1| hypothetical protein TBMG_03527 [Mycobacterium tuberculosis KZN
1435]
gi|254552583|ref|ZP_05143030.1| hypothetical protein Mtube_19405 [Mycobacterium tuberculosis
'98-R604 INH-RIF-EM']
6 more sequence titles
Length=248
Score = 436 bits (1122), Expect = 1e-120, Method: Compositional matrix adjust.
Identities = 229/229 (100%), Positives = 229/229 (100%), Gaps = 0/229 (0%)
Query 1 MRGLLPVAGHWVSVLTGLVPLALVIALSPLSVIPAVLVVHSPQPRPSSLAFLGGWLLGLA 60
MRGLLPVAGHWVSVLTGLVPLALVIALSPLSVIPAVLVVHSPQPRPSSLAFLGGWLLGLA
Sbjct 20 MRGLLPVAGHWVSVLTGLVPLALVIALSPLSVIPAVLVVHSPQPRPSSLAFLGGWLLGLA 79
Query 61 VVTAVFVAASGALGGLSTTSPAWASWLRVVLGSALIVFGVLRWLTRHRHTEMPGWMRAFA 120
VVTAVFVAASGALGGLSTTSPAWASWLRVVLGSALIVFGVLRWLTRHRHTEMPGWMRAFA
Sbjct 80 VVTAVFVAASGALGGLSTTSPAWASWLRVVLGSALIVFGVLRWLTRHRHTEMPGWMRAFA 139
Query 121 SFTPARAGLVGAVLVVVRPEVLIICAAAGLAIGSGGHGAAGSWIYTAFFAMLAASTVAIP 180
SFTPARAGLVGAVLVVVRPEVLIICAAAGLAIGSGGHGAAGSWIYTAFFAMLAASTVAIP
Sbjct 140 SFTPARAGLVGAVLVVVRPEVLIICAAAGLAIGSGGHGAAGSWIYTAFFAMLAASTVAIP 199
Query 181 ILAYVAAGDRLDDSLERLKDWMEKNHAGMVAAILVVIGLLLLYNGVHAM 229
ILAYVAAGDRLDDSLERLKDWMEKNHAGMVAAILVVIGLLLLYNGVHAM
Sbjct 200 ILAYVAAGDRLDDSLERLKDWMEKNHAGMVAAILVVIGLLLLYNGVHAM 248
>gi|148824689|ref|YP_001289443.1| hypothetical protein TBFG_13516 [Mycobacterium tuberculosis F11]
gi|254366830|ref|ZP_04982871.1| hypothetical integral membrane protein [Mycobacterium tuberculosis
str. Haarlem]
gi|308232475|ref|ZP_07416167.2| membrane protein [Mycobacterium tuberculosis SUMu001]
27 more sequence titles
Length=236
Score = 436 bits (1121), Expect = 1e-120, Method: Compositional matrix adjust.
Identities = 229/229 (100%), Positives = 229/229 (100%), Gaps = 0/229 (0%)
Query 1 MRGLLPVAGHWVSVLTGLVPLALVIALSPLSVIPAVLVVHSPQPRPSSLAFLGGWLLGLA 60
MRGLLPVAGHWVSVLTGLVPLALVIALSPLSVIPAVLVVHSPQPRPSSLAFLGGWLLGLA
Sbjct 8 MRGLLPVAGHWVSVLTGLVPLALVIALSPLSVIPAVLVVHSPQPRPSSLAFLGGWLLGLA 67
Query 61 VVTAVFVAASGALGGLSTTSPAWASWLRVVLGSALIVFGVLRWLTRHRHTEMPGWMRAFA 120
VVTAVFVAASGALGGLSTTSPAWASWLRVVLGSALIVFGVLRWLTRHRHTEMPGWMRAFA
Sbjct 68 VVTAVFVAASGALGGLSTTSPAWASWLRVVLGSALIVFGVLRWLTRHRHTEMPGWMRAFA 127
Query 121 SFTPARAGLVGAVLVVVRPEVLIICAAAGLAIGSGGHGAAGSWIYTAFFAMLAASTVAIP 180
SFTPARAGLVGAVLVVVRPEVLIICAAAGLAIGSGGHGAAGSWIYTAFFAMLAASTVAIP
Sbjct 128 SFTPARAGLVGAVLVVVRPEVLIICAAAGLAIGSGGHGAAGSWIYTAFFAMLAASTVAIP 187
Query 181 ILAYVAAGDRLDDSLERLKDWMEKNHAGMVAAILVVIGLLLLYNGVHAM 229
ILAYVAAGDRLDDSLERLKDWMEKNHAGMVAAILVVIGLLLLYNGVHAM
Sbjct 188 ILAYVAAGDRLDDSLERLKDWMEKNHAGMVAAILVVIGLLLLYNGVHAM 236
>gi|15610617|ref|NP_217998.1| integral membrane protein [Mycobacterium tuberculosis H37Rv]
gi|15843093|ref|NP_338130.1| hypothetical protein MT3585 [Mycobacterium tuberculosis CDC1551]
gi|31794657|ref|NP_857150.1| integral membrane protein [Mycobacterium bovis AF2122/97]
41 more sequence titles
Length=229
Score = 435 bits (1119), Expect = 2e-120, Method: Compositional matrix adjust.
Identities = 229/229 (100%), Positives = 229/229 (100%), Gaps = 0/229 (0%)
Query 1 MRGLLPVAGHWVSVLTGLVPLALVIALSPLSVIPAVLVVHSPQPRPSSLAFLGGWLLGLA 60
MRGLLPVAGHWVSVLTGLVPLALVIALSPLSVIPAVLVVHSPQPRPSSLAFLGGWLLGLA
Sbjct 1 MRGLLPVAGHWVSVLTGLVPLALVIALSPLSVIPAVLVVHSPQPRPSSLAFLGGWLLGLA 60
Query 61 VVTAVFVAASGALGGLSTTSPAWASWLRVVLGSALIVFGVLRWLTRHRHTEMPGWMRAFA 120
VVTAVFVAASGALGGLSTTSPAWASWLRVVLGSALIVFGVLRWLTRHRHTEMPGWMRAFA
Sbjct 61 VVTAVFVAASGALGGLSTTSPAWASWLRVVLGSALIVFGVLRWLTRHRHTEMPGWMRAFA 120
Query 121 SFTPARAGLVGAVLVVVRPEVLIICAAAGLAIGSGGHGAAGSWIYTAFFAMLAASTVAIP 180
SFTPARAGLVGAVLVVVRPEVLIICAAAGLAIGSGGHGAAGSWIYTAFFAMLAASTVAIP
Sbjct 121 SFTPARAGLVGAVLVVVRPEVLIICAAAGLAIGSGGHGAAGSWIYTAFFAMLAASTVAIP 180
Query 181 ILAYVAAGDRLDDSLERLKDWMEKNHAGMVAAILVVIGLLLLYNGVHAM 229
ILAYVAAGDRLDDSLERLKDWMEKNHAGMVAAILVVIGLLLLYNGVHAM
Sbjct 181 ILAYVAAGDRLDDSLERLKDWMEKNHAGMVAAILVVIGLLLLYNGVHAM 229
>gi|118619230|ref|YP_907562.1| hypothetical protein MUL_4034 [Mycobacterium ulcerans Agy99]
gi|183984929|ref|YP_001853220.1| hypothetical protein MMAR_4961 [Mycobacterium marinum M]
gi|118571340|gb|ABL06091.1| conserved membrane protein [Mycobacterium ulcerans Agy99]
gi|183178255|gb|ACC43365.1| conserved membrane protein [Mycobacterium marinum M]
Length=229
Score = 300 bits (769), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 150/229 (66%), Positives = 188/229 (83%), Gaps = 0/229 (0%)
Query 1 MRGLLPVAGHWVSVLTGLVPLALVIALSPLSVIPAVLVVHSPQPRPSSLAFLGGWLLGLA 60
MR LLPV G+ SVL LVPLALVIA+SP+++IPAVLV+H+P+PRP+ LAFLGGW+LGL
Sbjct 1 MRKLLPVTGNSGSVLASLVPLALVIAVSPITIIPAVLVLHAPRPRPTGLAFLGGWVLGLI 60
Query 61 VVTAVFVAASGALGGLSTTSPAWASWLRVVLGSALIVFGVLRWLTRHRHTEMPGWMRAFA 120
VTA+FVA S GGL + PAWASW R+V+GS LI+FG+ RWL RH E P WMR+FA
Sbjct 61 AVTAMFVAGSELFGGLRRSPPAWASWARIVVGSLLILFGIYRWLNRHGEVESPRWMRSFA 120
Query 121 SFTPARAGLVGAVLVVVRPEVLIICAAAGLAIGSGGHGAAGSWIYTAFFAMLAASTVAIP 180
+ TP RAG+ AVLV+VRPEV+IIC AAGLAIG+GG G A W+ A F ++ASTVA P
Sbjct 121 TITPRRAGITAAVLVLVRPEVVIICLAAGLAIGTGGLGVAMRWVCGAIFVAISASTVAGP 180
Query 181 ILAYVAAGDRLDDSLERLKDWMEKNHAGMVAAILVVIGLLLLYNGVHAM 229
ILA+V AGDRL+DSL+RLK+WMEKNHAGM+AA+L++IG+++LYNG+HA+
Sbjct 181 ILAFVGAGDRLEDSLDRLKEWMEKNHAGMLAAVLILIGVMVLYNGIHAL 229
>gi|240170027|ref|ZP_04748686.1| hypothetical protein MkanA1_11991 [Mycobacterium kansasii ATCC
12478]
Length=223
Score = 293 bits (749), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 149/220 (68%), Positives = 177/220 (81%), Gaps = 0/220 (0%)
Query 10 HWVSVLTGLVPLALVIALSPLSVIPAVLVVHSPQPRPSSLAFLGGWLLGLAVVTAVFVAA 69
+W +VL LVPLALVIA+SPL+VIPAVLV+H+P+PRP+ LAFLGGWLLGLA VTA+F+A
Sbjct 4 NWGAVLASLVPLALVIAVSPLTVIPAVLVLHAPRPRPTGLAFLGGWLLGLAAVTAIFIAG 63
Query 70 SGALGGLSTTSPAWASWLRVVLGSALIVFGVLRWLTRHRHTEMPGWMRAFASFTPARAGL 129
SG LGGL T PAWASWLRVVLGSALI+FG RWLTRH H E P WMR+F++ TP RAG+
Sbjct 64 SGLLGGLHRTPPAWASWLRVVLGSALILFGGYRWLTRHGHAESPRWMRSFSTITPRRAGI 123
Query 130 VGAVLVVVRPEVLIICAAAGLAIGSGGHGAAGSWIYTAFFAMLAASTVAIPILAYVAAGD 189
AVLVV+RPEVLIIC A GLAIG+ G AG WI A F LA STVA PI+ Y++A D
Sbjct 124 TAAVLVVLRPEVLIICLAGGLAIGTSALGVAGKWICAAVFVALAGSTVAFPIVGYLSAAD 183
Query 190 RLDDSLERLKDWMEKNHAGMVAAILVVIGLLLLYNGVHAM 229
RLD+ L RLKDWM KNHA M+A +LV+IG ++LYNG+ A+
Sbjct 184 RLDEPLTRLKDWMAKNHAAMLAVVLVLIGAMVLYNGIRAL 223
>gi|342859195|ref|ZP_08715849.1| hypothetical protein MCOL_09963 [Mycobacterium colombiense CECT
3035]
gi|342133436|gb|EGT86639.1| hypothetical protein MCOL_09963 [Mycobacterium colombiense CECT
3035]
Length=227
Score = 265 bits (677), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 131/226 (58%), Positives = 166/226 (74%), Gaps = 0/226 (0%)
Query 4 LLPVAGHWVSVLTGLVPLALVIALSPLSVIPAVLVVHSPQPRPSSLAFLGGWLLGLAVVT 63
+LPV W SVL+ L+ LA VIALSP++VIPAVLV+H+P+PRP+SL+FLGGWLLGL +T
Sbjct 1 MLPVDASWASVLSKLIALAAVIALSPITVIPAVLVLHAPRPRPASLSFLGGWLLGLVALT 60
Query 64 AVFVAASGALGGLSTTSPAWASWLRVVLGSALIVFGVLRWLTRHRHTEMPGWMRAFASFT 123
FV+ S L G T P WA W+R+ G AL+ W TRHR MP WMR+F++ +
Sbjct 61 TAFVSGSELLSGFHATPPKWAGWVRLAFGVALLALAAYHWFTRHRQRSMPRWMRSFSTLS 120
Query 124 PARAGLVGAVLVVVRPEVLIICAAAGLAIGSGGHGAAGSWIYTAFFAMLAASTVAIPILA 183
P RAG++GAVLV +RPEVLI+CAAAGLA+G+ G + A F +LAASTVAIPILA
Sbjct 121 PGRAGVMGAVLVPLRPEVLILCAAAGLAVGNSSLGTGAQAVAVAIFVVLAASTVAIPILA 180
Query 184 YVAAGDRLDDSLERLKDWMEKNHAGMVAAILVVIGLLLLYNGVHAM 229
YV AGDR DD+LERLK WM+ NH M+A IL +IGL++LYNG+ +
Sbjct 181 YVGAGDRFDDALERLKAWMDANHDAMMAVILFLIGLIVLYNGIRTL 226
>gi|296167693|ref|ZP_06849939.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295897106|gb|EFG76719.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length=223
Score = 260 bits (665), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 144/223 (65%), Positives = 180/223 (81%), Gaps = 0/223 (0%)
Query 7 VAGHWVSVLTGLVPLALVIALSPLSVIPAVLVVHSPQPRPSSLAFLGGWLLGLAVVTAVF 66
+AG W +VLTGLVPL LVI+LSPL+VIPAVLV+ +P+PRPS LAFLGGWLL LA +TA+
Sbjct 1 MAGSWGTVLTGLVPLGLVISLSPLTVIPAVLVLQAPRPRPSGLAFLGGWLLSLAALTALS 60
Query 67 VAASGALGGLSTTSPAWASWLRVVLGSALIVFGVLRWLTRHRHTEMPGWMRAFASFTPAR 126
VAAS LGGL + P W+SWLRVV GSALIV+G+ +WL R H E P WMR+FAS TPAR
Sbjct 61 VAASHLLGGLDKSPPRWSSWLRVVFGSALIVYGIYKWLNRRGHGESPKWMRSFASITPAR 120
Query 127 AGLVGAVLVVVRPEVLIICAAAGLAIGSGGHGAAGSWIYTAFFAMLAASTVAIPILAYVA 186
AG++GAVL VVRP+V++IC AGL IG+ G G G W FF +LAAS+VAIPILAY A
Sbjct 121 AGVMGAVLAVVRPDVVLICIPAGLGIGTAGLGLVGDWAAAGFFVVLAASSVAIPILAYAA 180
Query 187 AGDRLDDSLERLKDWMEKNHAGMVAAILVVIGLLLLYNGVHAM 229
AG RLDD+L RLKDWM++N+A ++AA+LV+IG ++LY+G+ A+
Sbjct 181 AGSRLDDTLARLKDWMDRNNAALLAAVLVLIGAMVLYHGIDAL 223
>gi|254821950|ref|ZP_05226951.1| hypothetical protein MintA_18602 [Mycobacterium intracellulare
ATCC 13950]
Length=224
Score = 259 bits (661), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 135/219 (62%), Positives = 167/219 (77%), Gaps = 0/219 (0%)
Query 11 WVSVLTGLVPLALVIALSPLSVIPAVLVVHSPQPRPSSLAFLGGWLLGLAVVTAVFVAAS 70
W SVL+ LV LA VIALSP++VIPAVLV+H+P+PRP+SLAFLGGWL+GL TA FVA S
Sbjct 5 WASVLSKLVALAAVIALSPITVIPAVLVLHAPRPRPASLAFLGGWLVGLVAFTAAFVAGS 64
Query 71 GALGGLSTTSPAWASWLRVVLGSALIVFGVLRWLTRHRHTEMPGWMRAFASFTPARAGLV 130
AL G T P WASW+R+V G AL+ W TRHRH MP WMR+F++ +PARAG+V
Sbjct 65 EALSGFHATPPKWASWVRLVFGVALLALAAFHWFTRHRHRSMPRWMRSFSTLSPARAGVV 124
Query 131 GAVLVVVRPEVLIICAAAGLAIGSGGHGAAGSWIYTAFFAMLAASTVAIPILAYVAAGDR 190
GAVLV +RPEVLI+CAAAGLA+G+ A G + A F ++AASTVAIPILAY +GDR
Sbjct 125 GAVLVPLRPEVLILCAAAGLAVGNSSLSAGGELVAAAIFVVVAASTVAIPILAYAGSGDR 184
Query 191 LDDSLERLKDWMEKNHAGMVAAILVVIGLLLLYNGVHAM 229
+ +LERLK WME NH M+A IL +IGL++LYNG+ A+
Sbjct 185 FEGTLERLKAWMEANHDAMLAVILFLIGLIVLYNGIRAL 223
>gi|41409905|ref|NP_962741.1| hypothetical protein MAP3807 [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|41398738|gb|AAS06357.1| hypothetical protein MAP_3807 [Mycobacterium avium subsp. paratuberculosis
K-10]
Length=229
Score = 253 bits (647), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 150/229 (66%), Positives = 186/229 (82%), Gaps = 0/229 (0%)
Query 1 MRGLLPVAGHWVSVLTGLVPLALVIALSPLSVIPAVLVVHSPQPRPSSLAFLGGWLLGLA 60
M GL +AG W +VLTGLVPL LVI+LSPL+VIPAVLV+ +P+PRPSSLAFLGGWLL LA
Sbjct 1 MAGLPLMAGSWGTVLTGLVPLGLVISLSPLTVIPAVLVLQAPRPRPSSLAFLGGWLLSLA 60
Query 61 VVTAVFVAASGALGGLSTTSPAWASWLRVVLGSALIVFGVLRWLTRHRHTEMPGWMRAFA 120
+TA+ VAAS LGGL + P W+SWLRVVLG+ LI +G+ RW TRHRH+E P WMR+FA
Sbjct 61 ALTALAVAASHLLGGLDRSPPRWSSWLRVVLGAGLIGYGIFRWHTRHRHSESPAWMRSFA 120
Query 121 SFTPARAGLVGAVLVVVRPEVLIICAAAGLAIGSGGHGAAGSWIYTAFFAMLAASTVAIP 180
S TPARAG+ GAVL VVRP+V +IC AGLAIGS G G G W+ FF +AAS+VAIP
Sbjct 121 SITPARAGITGAVLAVVRPDVALICVPAGLAIGSSGLGPIGDWMAALFFVAVAASSVAIP 180
Query 181 ILAYVAAGDRLDDSLERLKDWMEKNHAGMVAAILVVIGLLLLYNGVHAM 229
ILAY+AAG RLDD+L RL+DWM++N+A ++AA+LVVIG ++LY+G+ A+
Sbjct 181 ILAYLAAGSRLDDALARLRDWMDRNNAALLAAVLVVIGAMVLYHGIDAL 229
>gi|108797453|ref|YP_637650.1| hypothetical protein Mmcs_0473 [Mycobacterium sp. MCS]
gi|119866538|ref|YP_936490.1| hypothetical protein Mkms_0484 [Mycobacterium sp. KMS]
gi|126433072|ref|YP_001068763.1| hypothetical protein Mjls_0460 [Mycobacterium sp. JLS]
gi|108767872|gb|ABG06594.1| conserved hypothetical protein [Mycobacterium sp. MCS]
gi|119692627|gb|ABL89700.1| conserved hypothetical protein [Mycobacterium sp. KMS]
gi|126232872|gb|ABN96272.1| conserved hypothetical protein [Mycobacterium sp. JLS]
Length=221
Score = 253 bits (647), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 129/221 (59%), Positives = 165/221 (75%), Gaps = 2/221 (0%)
Query 9 GHWVSVLTGLVPLALVIALSPLSVIPAVLVVHSPQPRPSSLAFLGGWLLGLAVVTAVFVA 68
G W +VLT L+PLALVIALSPLS+IPAVL++ +P+PRP++LAF+ GWL+GL +TA+FVA
Sbjct 3 GSWGTVLTELIPLALVIALSPLSIIPAVLMLQTPRPRPTALAFMAGWLIGLGALTAIFVA 62
Query 69 ASGALGGLSTTSPAWASWLRVVLGSALIVFGVLRWLTRHRHTEMPGWMRAFASFTPARAG 128
SGA+GG P+WASWLR+V+G+ALIVFG++R+ RH + P W+R + P RA
Sbjct 63 VSGAIGGFE-KPPSWASWLRIVIGAALIVFGLVRFARRHSSSHQPKWLRNLTTLGPGRAA 121
Query 129 LVGAVLVVVRPEVLIICAAAGLAIGSGGHGAAGSWIYTAFFAMLAASTVAIPILAYVAAG 188
AVL V P+VL IC AAGLAIGS G G A W +FA +A +VA+PILAY +G
Sbjct 122 GTAAVLTVANPKVLFICVAAGLAIGSAGLGNA-VWAAVVYFAAIAGCSVAVPILAYAVSG 180
Query 189 DRLDDSLERLKDWMEKNHAGMVAAILVVIGLLLLYNGVHAM 229
RLDD L RLKDWME+NHA ++A ILVVIGLL+LY G+H +
Sbjct 181 GRLDDPLARLKDWMERNHATLMAVILVVIGLLVLYKGIHTL 221
>gi|254821951|ref|ZP_05226952.1| hypothetical protein MintA_18607 [Mycobacterium intracellulare
ATCC 13950]
Length=223
Score = 253 bits (646), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 148/223 (67%), Positives = 182/223 (82%), Gaps = 0/223 (0%)
Query 7 VAGHWVSVLTGLVPLALVIALSPLSVIPAVLVVHSPQPRPSSLAFLGGWLLGLAVVTAVF 66
+AG W +VLTGLVPL LVI+LSPL+VIPAVLV+ +P+PRPSSLAFLGGWLL LA +TA+
Sbjct 1 MAGSWGTVLTGLVPLGLVISLSPLTVIPAVLVLQAPRPRPSSLAFLGGWLLSLAALTALA 60
Query 67 VAASGALGGLSTTSPAWASWLRVVLGSALIVFGVLRWLTRHRHTEMPGWMRAFASFTPAR 126
VAASG LGGL P W+SWLRVVLG+ LI FGV RWL R+ +E P WMR+FA+ TPAR
Sbjct 61 VAASGLLGGLDKAPPRWSSWLRVVLGAGLIAFGVYRWLRRNDQSESPAWMRSFANITPAR 120
Query 127 AGLVGAVLVVVRPEVLIICAAAGLAIGSGGHGAAGSWIYTAFFAMLAASTVAIPILAYVA 186
AG+ GAVL +VRP+V +IC AGL IG+ G G AG W AFF +AAS+VAIPILAYVA
Sbjct 121 AGITGAVLALVRPDVALICVPAGLGIGTSGLGVAGDWAAAAFFVAIAASSVAIPILAYVA 180
Query 187 AGDRLDDSLERLKDWMEKNHAGMVAAILVVIGLLLLYNGVHAM 229
AG RLDD+L RLKDWM++N+A ++AA+LVVIG ++LY+G+HA+
Sbjct 181 AGSRLDDTLARLKDWMDRNNAALLAAVLVVIGAMVLYHGIHAL 223
>gi|118463847|ref|YP_883964.1| hypothetical protein MAV_4839 [Mycobacterium avium 104]
gi|118165134|gb|ABK66031.1| conserved hypothetical protein [Mycobacterium avium 104]
Length=223
Score = 253 bits (645), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 147/223 (66%), Positives = 183/223 (83%), Gaps = 0/223 (0%)
Query 7 VAGHWVSVLTGLVPLALVIALSPLSVIPAVLVVHSPQPRPSSLAFLGGWLLGLAVVTAVF 66
+AG W +VLTGLVPL LVI+LSPL+VIPAVLV+ +P+PRPSSLAFLGGWLL LA +TA+
Sbjct 1 MAGSWGTVLTGLVPLGLVISLSPLTVIPAVLVLQAPRPRPSSLAFLGGWLLSLAALTALA 60
Query 67 VAASGALGGLSTTSPAWASWLRVVLGSALIVFGVLRWLTRHRHTEMPGWMRAFASFTPAR 126
VAAS LGGL + P W+SWLRVVLG+ LI +G+ RW TRHRH+E P WMR+FAS TPAR
Sbjct 61 VAASHLLGGLDRSPPRWSSWLRVVLGAGLIGYGIFRWQTRHRHSESPAWMRSFASITPAR 120
Query 127 AGLVGAVLVVVRPEVLIICAAAGLAIGSGGHGAAGSWIYTAFFAMLAASTVAIPILAYVA 186
AG+ GAVL VVRP+V +IC AGLAIGS G G G W+ FF +AAS+VAIPILAY+A
Sbjct 121 AGITGAVLAVVRPDVALICVPAGLAIGSSGLGPIGDWMAALFFVAVAASSVAIPILAYLA 180
Query 187 AGDRLDDSLERLKDWMEKNHAGMVAAILVVIGLLLLYNGVHAM 229
AG RLDD+L RL+DWM++N+A ++AA+LVVIG ++LY+G+ A+
Sbjct 181 AGSRLDDALARLRDWMDRNNAALLAAVLVVIGAMVLYHGIDAL 223
>gi|336460231|gb|EGO39134.1| Protein of unknown function (DUF2910) [Mycobacterium avium subsp.
paratuberculosis S397]
Length=223
Score = 252 bits (643), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 147/223 (66%), Positives = 183/223 (83%), Gaps = 0/223 (0%)
Query 7 VAGHWVSVLTGLVPLALVIALSPLSVIPAVLVVHSPQPRPSSLAFLGGWLLGLAVVTAVF 66
+AG W +VLTGLVPL LVI+LSPL+VIPAVLV+ +P+PRPSSLAFLGGWLL LA +TA+
Sbjct 1 MAGSWGTVLTGLVPLGLVISLSPLTVIPAVLVLQAPRPRPSSLAFLGGWLLSLAALTALA 60
Query 67 VAASGALGGLSTTSPAWASWLRVVLGSALIVFGVLRWLTRHRHTEMPGWMRAFASFTPAR 126
VAAS LGGL + P W+SWLRVVLG+ LI +G+ RW TRHRH+E P WMR+FAS TPAR
Sbjct 61 VAASHLLGGLDRSPPRWSSWLRVVLGTGLIGYGIFRWHTRHRHSESPAWMRSFASITPAR 120
Query 127 AGLVGAVLVVVRPEVLIICAAAGLAIGSGGHGAAGSWIYTAFFAMLAASTVAIPILAYVA 186
AG+ GAVL VVRP+V +IC AGLAIGS G G G W+ FF +AAS+VAIPILAY+A
Sbjct 121 AGITGAVLAVVRPDVALICVPAGLAIGSSGLGPIGDWMAALFFVAVAASSVAIPILAYLA 180
Query 187 AGDRLDDSLERLKDWMEKNHAGMVAAILVVIGLLLLYNGVHAM 229
AG RLDD+L RL+DWM++N+A ++AA+LVVIG ++LY+G+ A+
Sbjct 181 AGSRLDDALARLRDWMDRNNAALLAAVLVVIGAMVLYHGIDAL 223
>gi|254777277|ref|ZP_05218793.1| hypothetical protein MaviaA2_21771 [Mycobacterium avium subsp.
avium ATCC 25291]
Length=223
Score = 251 bits (642), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 147/223 (66%), Positives = 183/223 (83%), Gaps = 0/223 (0%)
Query 7 VAGHWVSVLTGLVPLALVIALSPLSVIPAVLVVHSPQPRPSSLAFLGGWLLGLAVVTAVF 66
+AG W +VLTGLVPL LVI+LSPL+VIPAVLV+ +P+PRPSSLAFLGGWLL LA +TA+
Sbjct 1 MAGSWGTVLTGLVPLGLVISLSPLTVIPAVLVLQAPRPRPSSLAFLGGWLLSLAALTALA 60
Query 67 VAASGALGGLSTTSPAWASWLRVVLGSALIVFGVLRWLTRHRHTEMPGWMRAFASFTPAR 126
VAAS LGGL + P W+SWLRVVLG+ LI +G+ RW TRHRH+E P WMR+FAS TPAR
Sbjct 61 VAASHLLGGLDRSPPRWSSWLRVVLGAGLIGYGIFRWHTRHRHSESPAWMRSFASITPAR 120
Query 127 AGLVGAVLVVVRPEVLIICAAAGLAIGSGGHGAAGSWIYTAFFAMLAASTVAIPILAYVA 186
AG+ GAVL VVRP+V +IC AGLAIGS G G G W+ FF +AAS+VAIPILAY+A
Sbjct 121 AGITGAVLAVVRPDVALICVPAGLAIGSSGLGPIGDWMAALFFVAVAASSVAIPILAYLA 180
Query 187 AGDRLDDSLERLKDWMEKNHAGMVAAILVVIGLLLLYNGVHAM 229
AG RLDD+L RL+DWM++N+A ++AA+LVVIG ++LY+G+ A+
Sbjct 181 AGSRLDDALARLRDWMDRNNAALLAAVLVVIGAMVLYHGIDAL 223
>gi|41409904|ref|NP_962740.1| hypothetical protein MAP3806 [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|41398737|gb|AAS06356.1| hypothetical protein MAP_3806 [Mycobacterium avium subsp. paratuberculosis
K-10]
Length=224
Score = 251 bits (640), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 135/219 (62%), Positives = 166/219 (76%), Gaps = 0/219 (0%)
Query 11 WVSVLTGLVPLALVIALSPLSVIPAVLVVHSPQPRPSSLAFLGGWLLGLAVVTAVFVAAS 70
W SVL+ LV LA VIALSP++VIPAVLV+H+P+PRP+SLAFLGGW+LGL +TA FV S
Sbjct 5 WASVLSKLVALAAVIALSPITVIPAVLVLHAPRPRPASLAFLGGWVLGLVGLTAAFVGGS 64
Query 71 GALGGLSTTSPAWASWLRVVLGSALIVFGVLRWLTRHRHTEMPGWMRAFASFTPARAGLV 130
L GL T P WASW+R+V G AL+ W TRHR MP WMR+FA+ +P RAG+V
Sbjct 65 ELLSGLHATPPKWASWVRLVFGVALLALAAYHWFTRHRQRSMPRWMRSFATLSPVRAGVV 124
Query 131 GAVLVVVRPEVLIICAAAGLAIGSGGHGAAGSWIYTAFFAMLAASTVAIPILAYVAAGDR 190
GAVLV +RPEVLI+CAAAGLA+G+ A + A F +LAASTVA+PILAY AGDR
Sbjct 125 GAVLVPLRPEVLILCAAAGLAVGNSSLSAGAQLVAAAIFVVLAASTVAVPILAYAGAGDR 184
Query 191 LDDSLERLKDWMEKNHAGMVAAILVVIGLLLLYNGVHAM 229
DD+LERLK WME NH M+A IL++IGL++LYNG+ A+
Sbjct 185 FDDALERLKAWMEANHDAMLAVILLLIGLIVLYNGIRAL 223
>gi|296167692|ref|ZP_06849938.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295897105|gb|EFG76718.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length=226
Score = 249 bits (637), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 146/226 (65%), Positives = 177/226 (79%), Gaps = 0/226 (0%)
Query 4 LLPVAGHWVSVLTGLVPLALVIALSPLSVIPAVLVVHSPQPRPSSLAFLGGWLLGLAVVT 63
+LPV W SVLT LV LA VIALSP++VIPAVLV+H+P+PRP+SL+FL GW+LGLA +T
Sbjct 1 MLPVEASWGSVLTKLVALAAVIALSPITVIPAVLVLHAPRPRPTSLSFLAGWVLGLAALT 60
Query 64 AVFVAASGALGGLSTTSPAWASWLRVVLGSALIVFGVLRWLTRHRHTEMPGWMRAFASFT 123
A F AS LG L T P WASWLRVVLGSALI G WLTRHRH MP WMR+F++ T
Sbjct 61 AAFAGASDLLGDLHTAPPTWASWLRVVLGSALIALGAYHWLTRHRHGAMPRWMRSFSTLT 120
Query 124 PARAGLVGAVLVVVRPEVLIICAAAGLAIGSGGHGAAGSWIYTAFFAMLAASTVAIPILA 183
P RAG+ A LVV+RPEVL++CAAAGLA+G GAAG + A F + AASTVA+PILA
Sbjct 121 PRRAGVTAAALVVLRPEVLLLCAAAGLAVGGSSLGAAGRLLAGAVFLVFAASTVALPILA 180
Query 184 YVAAGDRLDDSLERLKDWMEKNHAGMVAAILVVIGLLLLYNGVHAM 229
Y AGDRLDD+LER+K WME+NH ++A ILV+IGL++LYNG+HA+
Sbjct 181 YAGAGDRLDDTLERVKVWMEENHGTLLAVILVLIGLMVLYNGIHAL 226
>gi|342859194|ref|ZP_08715848.1| hypothetical protein MCOL_09958 [Mycobacterium colombiense CECT
3035]
gi|342133435|gb|EGT86638.1| hypothetical protein MCOL_09958 [Mycobacterium colombiense CECT
3035]
Length=223
Score = 246 bits (628), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 141/223 (64%), Positives = 178/223 (80%), Gaps = 0/223 (0%)
Query 7 VAGHWVSVLTGLVPLALVIALSPLSVIPAVLVVHSPQPRPSSLAFLGGWLLGLAVVTAVF 66
+AG W +VLTGLVPL LVI+LSPL+VIPAVLV+ +P+PRPS LAFL GW L LA +TA+
Sbjct 1 MAGSWGTVLTGLVPLGLVISLSPLTVIPAVLVLQAPRPRPSGLAFLAGWALTLAALTALS 60
Query 67 VAASGALGGLSTTSPAWASWLRVVLGSALIVFGVLRWLTRHRHTEMPGWMRAFASFTPAR 126
VAAS LGGL P W+SWLRVVLGSALI +G+ +WL RH E P WMR+FAS +PAR
Sbjct 61 VAASHLLGGLDKAPPRWSSWLRVVLGSALIGYGIYKWLKRHGQAESPAWMRSFASISPAR 120
Query 127 AGLVGAVLVVVRPEVLIICAAAGLAIGSGGHGAAGSWIYTAFFAMLAASTVAIPILAYVA 186
AG++GAVL VVRP+V++IC AGL IG+ G G G W+ AFF +AAS+VAIPILAY A
Sbjct 121 AGIMGAVLAVVRPDVVLICIPAGLGIGTAGLGLVGDWVAAAFFVAIAASSVAIPILAYAA 180
Query 187 AGDRLDDSLERLKDWMEKNHAGMVAAILVVIGLLLLYNGVHAM 229
AG RLDD+L RLKDWM++N+A ++AA+LV+IG ++LY+G+ A+
Sbjct 181 AGSRLDDTLARLKDWMDRNNAALLAAVLVLIGAMVLYHGIQAL 223
>gi|336460232|gb|EGO39135.1| Protein of unknown function (DUF2910) [Mycobacterium avium subsp.
paratuberculosis S397]
Length=217
Score = 243 bits (621), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 131/216 (61%), Positives = 163/216 (76%), Gaps = 0/216 (0%)
Query 14 VLTGLVPLALVIALSPLSVIPAVLVVHSPQPRPSSLAFLGGWLLGLAVVTAVFVAASGAL 73
+L+ LV LA VIALSP++VIPAVLV+H+P+PRP+SLAFLGGW+LGL +TA FV S L
Sbjct 1 MLSKLVALAAVIALSPITVIPAVLVLHAPRPRPASLAFLGGWVLGLVGLTAAFVGGSELL 60
Query 74 GGLSTTSPAWASWLRVVLGSALIVFGVLRWLTRHRHTEMPGWMRAFASFTPARAGLVGAV 133
GL T P WASW+R+V G AL+ W TRHR MP WMR+FA+ +P RAG+VGAV
Sbjct 61 SGLHATPPKWASWVRLVFGVALLALAAYHWFTRHRQRSMPRWMRSFATLSPVRAGVVGAV 120
Query 134 LVVVRPEVLIICAAAGLAIGSGGHGAAGSWIYTAFFAMLAASTVAIPILAYVAAGDRLDD 193
LV +RPEVLI+CAAAGLA+G+ A + A F +LAASTV +PILAY AGDR DD
Sbjct 121 LVPLRPEVLILCAAAGLAVGNSSLSAGAQLVAAAIFVVLAASTVVVPILAYAGAGDRFDD 180
Query 194 SLERLKDWMEKNHAGMVAAILVVIGLLLLYNGVHAM 229
+LERLK WME NH M+A IL++IGL++LYNG+ A+
Sbjct 181 ALERLKAWMEANHDAMLAVILLLIGLIVLYNGIRAL 216
>gi|118465551|ref|YP_883965.1| hypothetical protein MAV_4841 [Mycobacterium avium 104]
gi|254777278|ref|ZP_05218794.1| hypothetical protein MaviaA2_21776 [Mycobacterium avium subsp.
avium ATCC 25291]
gi|118166838|gb|ABK67735.1| conserved hypothetical protein [Mycobacterium avium 104]
Length=217
Score = 243 bits (620), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 131/216 (61%), Positives = 163/216 (76%), Gaps = 0/216 (0%)
Query 14 VLTGLVPLALVIALSPLSVIPAVLVVHSPQPRPSSLAFLGGWLLGLAVVTAVFVAASGAL 73
+L+ LV LA VIALSP++VIPAVLV+H+P+PRP+SLAFLGGW+LGL +T FV S L
Sbjct 1 MLSKLVALAAVIALSPITVIPAVLVLHAPRPRPASLAFLGGWVLGLVGLTTAFVGGSELL 60
Query 74 GGLSTTSPAWASWLRVVLGSALIVFGVLRWLTRHRHTEMPGWMRAFASFTPARAGLVGAV 133
GL T P WASW+R+V G AL+ W TRHR MP WMR+FA+ +P RAG+VGAV
Sbjct 61 SGLHATPPKWASWVRLVFGVALLALAAYHWFTRHRQRSMPRWMRSFAALSPVRAGVVGAV 120
Query 134 LVVVRPEVLIICAAAGLAIGSGGHGAAGSWIYTAFFAMLAASTVAIPILAYVAAGDRLDD 193
LV +RPEVLI+CAAAGLA+G+ A + A F +LAASTVA+PIL YV AGDR DD
Sbjct 121 LVPLRPEVLILCAAAGLAVGNSSLSAGAQLVAAAIFVVLAASTVAVPILVYVGAGDRFDD 180
Query 194 SLERLKDWMEKNHAGMVAAILVVIGLLLLYNGVHAM 229
+LERLK WME NH M+A IL++IGL++LYNG+ A+
Sbjct 181 ALERLKAWMEANHDAMLAVILLLIGLIVLYNGIRAL 216
>gi|118472749|ref|YP_885135.1| hypothetical protein MSMEG_0729 [Mycobacterium smegmatis str.
MC2 155]
gi|118174036|gb|ABK74932.1| conserved hypothetical protein [Mycobacterium smegmatis str.
MC2 155]
Length=222
Score = 242 bits (618), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 129/223 (58%), Positives = 165/223 (74%), Gaps = 1/223 (0%)
Query 7 VAGHWVSVLTGLVPLALVIALSPLSVIPAVLVVHSPQPRPSSLAFLGGWLLGLAVVTAVF 66
+ G W SVLT L+PLA+V+ALSPLS+IPAVLV+ +P+PRP+ LAFLGGWL+G+A +TA+F
Sbjct 1 MTGIWSSVLTELIPLAMVVALSPLSIIPAVLVLQTPRPRPTGLAFLGGWLVGMAALTALF 60
Query 67 VAASGALGGLSTTSPAWASWLRVVLGSALIVFGVLRWLTRHRHTEMPGWMRAFASFTPAR 126
+ S G L P WASWLR+VLG+ALI+FGV RWL R + P WM++ TP R
Sbjct 61 IEVSNLFGRLDK-PPVWASWLRIVLGTALIIFGVYRWLNRSKAAHTPKWMQSMGKLTPPR 119
Query 127 AGLVGAVLVVVRPEVLIICAAAGLAIGSGGHGAAGSWIYTAFFAMLAASTVAIPILAYVA 186
AG+ G VL +V P+VL ICAAAGLAIGS G G W +F + A+STVA+PILAY
Sbjct 120 AGVTGVVLTIVNPKVLFICAAAGLAIGSAGLGQPQVWAAAIWFVVFASSTVALPILAYAV 179
Query 187 AGDRLDDSLERLKDWMEKNHAGMVAAILVVIGLLLLYNGVHAM 229
+G +LD +L RL +WME+ HA +VA ILVVIGLL+LY G+HA+
Sbjct 180 SGSKLDPTLARLGEWMERQHAVLVAVILVVIGLLVLYKGLHAL 222
>gi|120401658|ref|YP_951487.1| hypothetical protein Mvan_0642 [Mycobacterium vanbaalenii PYR-1]
gi|119954476|gb|ABM11481.1| conserved hypothetical protein [Mycobacterium vanbaalenii PYR-1]
Length=225
Score = 241 bits (615), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 128/221 (58%), Positives = 163/221 (74%), Gaps = 0/221 (0%)
Query 9 GHWVSVLTGLVPLALVIALSPLSVIPAVLVVHSPQPRPSSLAFLGGWLLGLAVVTAVFVA 68
G W +LT L+PLALVIALSPLS+IPAVLV+HSP+PRP+ LAFL GWL+GLA +TA+F+
Sbjct 3 GSWGPILTELIPLALVIALSPLSIIPAVLVLHSPRPRPTGLAFLVGWLVGLAALTAIFLQ 62
Query 69 ASGALGGLSTTSPAWASWLRVVLGSALIVFGVLRWLTRHRHTEMPGWMRAFASFTPARAG 128
S +GG+ T P+WASWLR+V+G LI FG RW+TR + MPGWM ++ TPA+AG
Sbjct 63 LSDLVGGIGTQPPSWASWLRIVVGVGLIGFGGYRWVTRKKSEHMPGWMTRMSTLTPAKAG 122
Query 129 LVGAVLVVVRPEVLIICAAAGLAIGSGGHGAAGSWIYTAFFAMLAASTVAIPILAYVAAG 188
A L V+ P+VL ICAAAGLAIGS G + W +F +A TVA+P+L Y +G
Sbjct 123 ATAAALTVLNPKVLFICAAAGLAIGSAGLDSPTVWGAMIWFVAIAGLTVALPVLGYAVSG 182
Query 189 DRLDDSLERLKDWMEKNHAGMVAAILVVIGLLLLYNGVHAM 229
+RLD +L RLK WME+ HA +VAAILV IGLL+LY G+HA+
Sbjct 183 ERLDPTLNRLKAWMERQHAVLVAAILVAIGLLVLYKGIHAL 223
>gi|333988984|ref|YP_004521598.1| hypothetical protein JDM601_0344 [Mycobacterium sp. JDM601]
gi|333484952|gb|AEF34344.1| integral membrane protein [Mycobacterium sp. JDM601]
Length=223
Score = 238 bits (608), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 136/217 (63%), Positives = 168/217 (78%), Gaps = 0/217 (0%)
Query 13 SVLTGLVPLALVIALSPLSVIPAVLVVHSPQPRPSSLAFLGGWLLGLAVVTAVFVAASGA 72
S+LT L+PLALV+ALSP++VIPAVLV+H+ +PR + L+FL GWL GLA +TA FVAASG
Sbjct 7 SLLTTLIPLALVVALSPITVIPAVLVLHTARPRETGLSFLTGWLAGLAALTAAFVAASGL 66
Query 73 LGGLSTTSPAWASWLRVVLGSALIVFGVLRWLTRHRHTEMPGWMRAFASFTPARAGLVGA 132
LGGL++T P WASWLR+V+G ALI FG RW TRHRH EMPGWMR+F S T RAGL
Sbjct 67 LGGLNSTPPTWASWLRIVVGVALIAFGGYRWATRHRHGEMPGWMRSFTSMTAPRAGLTAV 126
Query 133 VLVVVRPEVLIICAAAGLAIGSGGHGAAGSWIYTAFFAMLAASTVAIPILAYVAAGDRLD 192
L V+RPEVL +CAAAGLAIGS G A G+W A F +AASTV +PI+ Y+AA DR D
Sbjct 127 ALAVIRPEVLFMCAAAGLAIGSAGLTAMGNWQAAALFVAVAASTVVVPIVGYLAASDRFD 186
Query 193 DSLERLKDWMEKNHAGMVAAILVVIGLLLLYNGVHAM 229
+L RLKDWME+ HA ++A ILV+IG ++ YNG+H +
Sbjct 187 PALNRLKDWMEQQHAALLAVILVLIGAMVTYNGIHVL 223
>gi|145220856|ref|YP_001131534.1| hypothetical protein Mflv_0252 [Mycobacterium gilvum PYR-GCK]
gi|315442189|ref|YP_004075068.1| hypothetical protein Mspyr1_05240 [Mycobacterium sp. Spyr1]
gi|145213342|gb|ABP42746.1| conserved hypothetical protein [Mycobacterium gilvum PYR-GCK]
gi|315260492|gb|ADT97233.1| hypothetical protein Mspyr1_05240 [Mycobacterium sp. Spyr1]
Length=225
Score = 221 bits (564), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 124/221 (57%), Positives = 161/221 (73%), Gaps = 0/221 (0%)
Query 9 GHWVSVLTGLVPLALVIALSPLSVIPAVLVVHSPQPRPSSLAFLGGWLLGLAVVTAVFVA 68
G W S+L L+PLALVIALSPLS+IPAVLV+ + +PRP+ LAFL GW+LGLA +TAVF+
Sbjct 3 GTWGSILIELIPLALVIALSPLSIIPAVLVLSAARPRPTGLAFLAGWVLGLAALTAVFLQ 62
Query 69 ASGALGGLSTTSPAWASWLRVVLGSALIVFGVLRWLTRHRHTEMPGWMRAFASFTPARAG 128
S +GG+ T P+WASWLR+V+G LI++G RWL R MPGWM ++ TPA+A
Sbjct 63 LSDLVGGIGTKPPSWASWLRIVVGVLLILWGAYRWLKRASSEHMPGWMTRISALTPAKAA 122
Query 129 LVGAVLVVVRPEVLIICAAAGLAIGSGGHGAAGSWIYTAFFAMLAASTVAIPILAYVAAG 188
A L V+ +VL ICAAAGLAIGS G W +F ++AASTVA PI+AY +G
Sbjct 123 ATAAALTVLNVKVLFICAAAGLAIGSSGLDTPTVWAAVLWFVLVAASTVAAPIVAYAISG 182
Query 189 DRLDDSLERLKDWMEKNHAGMVAAILVVIGLLLLYNGVHAM 229
+RLD +L R++ WME+ HA ++AAILVVIGLL+LY G+HA+
Sbjct 183 ERLDPTLNRVQAWMERQHATLIAAILVVIGLLVLYKGIHAL 223
>gi|226309132|ref|YP_002769092.1| hypothetical protein RER_56450 [Rhodococcus erythropolis PR4]
gi|226188249|dbj|BAH36353.1| conserved hypothetical membrane protein [Rhodococcus erythropolis
PR4]
Length=219
Score = 140 bits (353), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 78/217 (36%), Positives = 132/217 (61%), Gaps = 0/217 (0%)
Query 13 SVLTGLVPLALVIALSPLSVIPAVLVVHSPQPRPSSLAFLGGWLLGLAVVTAVFVAASGA 72
SV+ L+PLA+ +A+SP+ +I A+L++ S + +S+ F GW+LG+ V T +FV S
Sbjct 3 SVIGDLLPLAVGVAVSPIPIIAAILMLLSKRAGSTSVGFALGWILGIVVATVIFVLLSSK 62
Query 73 LGGLSTTSPAWASWLRVVLGSALIVFGVLRWLTRHRHTEMPGWMRAFASFTPARAGLVGA 132
LG A SW+++ LG L+ FGV +W R E P WM+A T A+ +G
Sbjct 63 LGDSEGDPSATVSWIKLALGVLLLAFGVKQWRGRGGEHETPKWMQAIDDMTAAKGLGLGF 122
Query 133 VLVVVRPEVLIICAAAGLAIGSGGHGAAGSWIYTAFFAMLAASTVAIPILAYVAAGDRLD 192
L + P+ L++C AAG++IGS G+ + F ++AASTV +P++ Y+ A +RL
Sbjct 123 ALAAINPKNLMMCIAAGISIGSASLGSGEVVVAVLVFTVIAASTVCVPVIGYLVAAERLR 182
Query 193 DSLERLKDWMEKNHAGMVAAILVVIGLLLLYNGVHAM 229
L +LK W++ N+A +++ +++VIG++L+ G+ +
Sbjct 183 GPLAKLKVWLQDNNATVMSVLILVIGVVLIGKGIGGL 219
>gi|229491566|ref|ZP_04385387.1| putative membrane protein [Rhodococcus erythropolis SK121]
gi|229321247|gb|EEN87047.1| putative membrane protein [Rhodococcus erythropolis SK121]
Length=219
Score = 140 bits (352), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 76/217 (36%), Positives = 129/217 (60%), Gaps = 0/217 (0%)
Query 13 SVLTGLVPLALVIALSPLSVIPAVLVVHSPQPRPSSLAFLGGWLLGLAVVTAVFVAASGA 72
SV+ L+PLA+ +A+SP+ +I A+L++ S + +S+ F GW+LG+ V T +FV S
Sbjct 3 SVIGDLLPLAVGVAVSPIPIIAAILMLLSKRAGSTSVGFALGWILGIVVATVIFVLLSSK 62
Query 73 LGGLSTTSPAWASWLRVVLGSALIVFGVLRWLTRHRHTEMPGWMRAFASFTPARAGLVGA 132
LG A SW+++ LG L+ FGV +W R E P WM A T + +G
Sbjct 63 LGDSEGDPSATVSWIKLALGVLLLAFGVKQWRGRGGEHETPKWMHAIDDMTAVKGLGLGF 122
Query 133 VLVVVRPEVLIICAAAGLAIGSGGHGAAGSWIYTAFFAMLAASTVAIPILAYVAAGDRLD 192
L + P+ L++C AAG++IGS G+ + F ++AA TV +P++ Y+ A +RL
Sbjct 123 ALAAINPKNLMMCIAAGISIGSASLGSGEVVVAILVFTIIAACTVCVPVIGYLVAAERLR 182
Query 193 DSLERLKDWMEKNHAGMVAAILVVIGLLLLYNGVHAM 229
L +LK W++ N+A +++ +++VIG++L+ G+ +
Sbjct 183 GPLAKLKVWLQDNNATVMSVLILVIGVVLIGKGIGGL 219
>gi|258652796|ref|YP_003201952.1| hypothetical protein Namu_2611 [Nakamurella multipartita DSM
44233]
gi|258556021|gb|ACV78963.1| hypothetical protein Namu_2611 [Nakamurella multipartita DSM
44233]
Length=223
Score = 133 bits (335), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 87/219 (40%), Positives = 136/219 (63%), Gaps = 5/219 (2%)
Query 13 SVLTGLVPLALVIALSPLSVIPAVLVVHSPQPRPSSLAFLGGWLLGLAVVTAVFVAASGA 72
+V+ +PLA+ IALSPL +I A+L++ SP+ + FL GW++G+ VVT V + SG+
Sbjct 3 AVIGQTLPLAVGIALSPLPIIAAILMLLSPRAATNGSGFLLGWIIGVVVVTVVMIGLSGS 62
Query 73 L--GGLSTTSPAWASWLRVVLGSALIVFGVLRWLTRHRHTEMPGWMRAFASFTPARAGLV 130
L GG PAWASW ++VLG L++ G RW R + P WM+A +FT R+ +V
Sbjct 63 LHTGG---PPPAWASWTKIVLGILLVLRGAGRWRRRGEQRDTPKWMKAIDNFTFGRSLVV 119
Query 131 GAVLVVVRPEVLIICAAAGLAIGSGGHGAAGSWIYTAFFAMLAASTVAIPILAYVAAGDR 190
G +L V P+ LI+ AAGLAIG+ G + F +A+ TVAIP++ Y+ AG R
Sbjct 120 GMLLSAVNPKNLILAVAAGLAIGTAGLAIGAEVVVLIVFTAIASLTVAIPVIGYLVAGQR 179
Query 191 LDDSLERLKDWMEKNHAGMVAAILVVIGLLLLYNGVHAM 229
+ L+R K W++ N+AGM+A +++++ +L+ G+ +
Sbjct 180 MRPWLDRAKVWLQANNAGMMAVLILILSAVLIGKGIEGL 218
>gi|226306156|ref|YP_002766116.1| hypothetical protein RER_26690 [Rhodococcus erythropolis PR4]
gi|226185273|dbj|BAH33377.1| conserved hypothetical membrane protein [Rhodococcus erythropolis
PR4]
Length=220
Score = 132 bits (331), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 71/194 (37%), Positives = 115/194 (60%), Gaps = 0/194 (0%)
Query 13 SVLTGLVPLALVIALSPLSVIPAVLVVHSPQPRPSSLAFLGGWLLGLAVVTAVFVAASGA 72
SV+ L+P+A+ +A+SP++VI +L++ S + +S+ F GWLLG+ + T +FV S A
Sbjct 3 SVIGDLLPIAVGVAVSPVAVIATILMLLSKRAGSTSIGFALGWLLGIFIATVLFVTLSSA 62
Query 73 LGGLSTTSPAWASWLRVVLGSALIVFGVLRWLTRHRHTEMPGWMRAFASFTPARAGLVGA 132
L A SW+++ LG L+ FGV +W R E P WM+A T + +G
Sbjct 63 LSTSDNGPSATVSWIKLALGVLLLAFGVKQWRGRSGEHETPKWMQAIDEMTAVKGLGLGF 122
Query 133 VLVVVRPEVLIICAAAGLAIGSGGHGAAGSWIYTAFFAMLAASTVAIPILAYVAAGDRLD 192
L + P+ L++C AAG++IGS +G F ++A+STVAIP++ Y+ + DRL
Sbjct 123 ALAAINPKNLLMCIAAGVSIGSASLATSGVIASVLVFTIIASSTVAIPVIGYLVSADRLR 182
Query 193 DSLERLKDWMEKNH 206
+ L +LK W++ N+
Sbjct 183 EPLAKLKVWLQDNN 196
>gi|111021272|ref|YP_704244.1| hypothetical protein RHA1_ro04295 [Rhodococcus jostii RHA1]
gi|110820802|gb|ABG96086.1| conserved hypothetical protein [Rhodococcus jostii RHA1]
Length=262
Score = 117 bits (293), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 71/214 (34%), Positives = 130/214 (61%), Gaps = 1/214 (0%)
Query 13 SVLTGLVPLALVIALSPLSVIPAVLVVHSPQPRPSSLAFLGGWLLGLAVVTAVFVAASGA 72
SV+ L+PLA+ +A+SP+ +I +L++ S + +S F GW+LG+ V T +F+ +G+
Sbjct 44 SVIGELLPLAVGVAISPIPIIAVILMLLSKRAGGASAGFGVGWILGILVATGIFMLLAGS 103
Query 73 LGGLSTTSP-AWASWLRVVLGSALIVFGVLRWLTRHRHTEMPGWMRAFASFTPARAGLVG 131
+ + P A ASW++VVLG L++ +W +R+ H E P WM+A ++ +G
Sbjct 104 IDTSGSDGPSATASWVKVVLGVLLLLLAGRQWRSRNAHAEPPKWMQAIDDLNFVKSTGLG 163
Query 132 AVLVVVRPEVLIICAAAGLAIGSGGHGAAGSWIYTAFFAMLAASTVAIPILAYVAAGDRL 191
L + P+ L++C +AG+ IG+ G + + +LA STV +P++AY A D++
Sbjct 164 FALAAINPKNLLLCVSAGVGIGTAGVSGGEQVVALIVYTVLAGSTVLVPVIAYAVAADKM 223
Query 192 DDSLERLKDWMEKNHAGMVAAILVVIGLLLLYNG 225
+L+ LK W++ N+A +++ +L+V+G ++L G
Sbjct 224 RGTLDNLKVWLQSNNAAVMSVLLLVMGAVVLGKG 257
>gi|229490836|ref|ZP_04384671.1| putative membrane protein [Rhodococcus erythropolis SK121]
gi|229322226|gb|EEN88012.1| putative membrane protein [Rhodococcus erythropolis SK121]
Length=220
Score = 113 bits (282), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 72/194 (38%), Positives = 112/194 (58%), Gaps = 0/194 (0%)
Query 13 SVLTGLVPLALVIALSPLSVIPAVLVVHSPQPRPSSLAFLGGWLLGLAVVTAVFVAASGA 72
SV+ L+PLA+ +A+SP++VI +L++ S + +S F GWLLG+ + T +FV S A
Sbjct 3 SVVGELLPLAVGVAVSPVAVIATILMLLSKRAGSTSAGFAVGWLLGIFIATVLFVILSSA 62
Query 73 LGGLSTTSPAWASWLRVVLGSALIVFGVLRWLTRHRHTEMPGWMRAFASFTPARAGLVGA 132
+ A SW+++ LG L+ GV +W R E P WM+A T A+ +G
Sbjct 63 VSTSDDGPSATVSWIKLALGVLLLAVGVKQWRGRSGEHETPKWMQAVDEMTAAKGLGLGF 122
Query 133 VLVVVRPEVLIICAAAGLAIGSGGHGAAGSWIYTAFFAMLAASTVAIPILAYVAAGDRLD 192
L + + L++C AAG++IGS +G+ F ++A+STVAIP++ Y+ A DRL
Sbjct 123 ALAAINLKNLLMCIAAGVSIGSASLATSGAITSILVFTVIASSTVAIPVIGYLVAADRLR 182
Query 193 DSLERLKDWMEKNH 206
L LK W+E N+
Sbjct 183 KPLANLKVWLEDNN 196
>gi|296167302|ref|ZP_06849704.1| hypothetical protein HMPREF0591_3145 [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295897246|gb|EFG76850.1| hypothetical protein HMPREF0591_3145 [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length=216
Score = 111 bits (277), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 74/213 (35%), Positives = 120/213 (57%), Gaps = 1/213 (0%)
Query 14 VLTGLVPLALVIALSPLSVIPA-VLVVHSPQPRPSSLAFLGGWLLGLAVVTAVFVAASGA 72
VL L ALV+A+SP+ ++ + VL++H+ +P SS+A+L G L+ L V+T F+ A
Sbjct 2 VLAKLSAPALVVAVSPVPIVVSLVLLIHNDRPYSSSVAYLLGRLVSLTVLTTAFMRAPRL 61
Query 73 LGGLSTTSPAWASWLRVVLGSALIVFGVLRWLTRHRHTEMPGWMRAFASFTPARAGLVGA 132
L +P W W+ + +G+AL+ FG W R T PGW + TPA A +G
Sbjct 62 FDDLVGPAPPWGDWVVIGVGAALVAFGAWLWWRRAHGTGRPGWDGGVGTITPAAAAAIGM 121
Query 133 VLVVVRPEVLIICAAAGLAIGSGGHGAAGSWIYTAFFAMLAASTVAIPILAYVAAGDRLD 192
+ ++ P+VL AA G I + A + + A++A+LA STVA P++AY G R+D
Sbjct 122 LPMLANPKVLAATAAVGTQIATSRLTALSAVVAVAYYAVLATSTVAAPVVAYFVVGPRID 181
Query 193 DSLERLKDWMEKNHAGMVAAILVVIGLLLLYNG 225
LER++ W++ H + A + ++G ++ G
Sbjct 182 PHLERIRCWIQDRHRALAAITVALVGFAVVLYG 214
>gi|326384789|ref|ZP_08206465.1| hypothetical protein SCNU_17692 [Gordonia neofelifaecis NRRL
B-59395]
gi|326196451|gb|EGD53649.1| hypothetical protein SCNU_17692 [Gordonia neofelifaecis NRRL
B-59395]
Length=216
Score = 110 bits (275), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 78/215 (37%), Positives = 125/215 (59%), Gaps = 6/215 (2%)
Query 13 SVLTGLVPLALVIALSPLSVIPAVLVVHSPQPRPSSLAFLGGWLLGLAVVTAVFVAASGA 72
+V+ L+P+A+ +A+SP+ +I A+L++ R +SL F GW++G+ TA+F A
Sbjct 3 AVIGDLLPMAVGVAISPIPIIAAILMLLGKHARTTSLGFAAGWIIGVVAATAIFTTVGSA 62
Query 73 LGGLSTTSPAWASWLRVVLGSALIVFGVLRWLTRHRHTEMPGWMRAFASFT-PARAGLVG 131
G ST W+++VLG L+ GV W R P WM+A PA AG +G
Sbjct 63 ASGSSTA----VGWVKLVLGVLLLAEGVREWRARSGPASTPKWMKAIDEMKAPAGAG-IG 117
Query 132 AVLVVVRPEVLIICAAAGLAIGSGGHGAAGSWIYTAFFAMLAASTVAIPILAYVAAGDRL 191
VL V P+ L++C AAG+ IG+ + F+++A+STV +P+LAY A DRL
Sbjct 118 FVLAAVNPKNLMLCIAAGMQIGAASLSTGDDIVAIVVFSLIASSTVVVPVLAYQVAADRL 177
Query 192 DDSLERLKDWMEKNHAGMVAAILVVIGLLLLYNGV 226
L+ LK W+E N+ ++A +++VIG++L+ G+
Sbjct 178 RGPLDSLKAWLEANNKTVMAVLILVIGVVLIGKGI 212
>gi|326780062|ref|ZP_08239327.1| Protein of unknown function DUF2910 [Streptomyces cf. griseus
XylebKG-1]
gi|326660395|gb|EGE45241.1| Protein of unknown function DUF2910 [Streptomyces griseus XylebKG-1]
Length=225
Score = 107 bits (268), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 66/201 (33%), Positives = 106/201 (53%), Gaps = 4/201 (1%)
Query 22 ALVIALSPLSVIPAVLVVHSPQPRPSSLAFLGGWLLGLAVVTAVFVAASGALGGLSTTSP 81
A+ IA+SPL +I VL++ +P+ R + AF GW+L L +TAV V A G +P
Sbjct 12 AVGIAISPLPLIAVVLMLATPRGRVNGTAFTLGWMLTLGAITAVVVGAGSGAGADDAGTP 71
Query 82 A-WASWLRVVLGSALIVFGVLRWLTRHRHTE---MPGWMRAFASFTPARAGLVGAVLVVV 137
A W WL++ LG ++ G +W R R + +PGWMRA FTP +A + A+L
Sbjct 72 ADWTYWLKLALGVLFLLMGAKQWKDRPREGQEHTLPGWMRAIDRFTPGKAAGLAALLSGA 131
Query 138 RPEVLIICAAAGLAIGSGGHGAAGSWIYTAFFAMLAASTVAIPILAYVAAGDRLDDSLER 197
P+ L++ +I S G + F ++ ++ V +P+L YV G R L
Sbjct 132 NPKNLVLAVGGAASIASSPANVGGKAVAGVLFVLIGSACVLLPLLVYVFGGSRSAAVLGG 191
Query 198 LKDWMEKNHAGMVAAILVVIG 218
K WM ++++ ++ +L V+G
Sbjct 192 WKTWMGEHNSAIMTVVLTVLG 212
>gi|312139219|ref|YP_004006555.1| integral membrane protein [Rhodococcus equi 103S]
gi|311888558|emb|CBH47870.1| putative integral membrane protein [Rhodococcus equi 103S]
Length=223
Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 74/214 (35%), Positives = 122/214 (58%), Gaps = 6/214 (2%)
Query 18 LVPLALVIALSPLSVIPAVLVVHSPQPRPSSLAFLGGWLLGLAVVTAVFVAASGALGGLS 77
++PLA+ +A+SP+ +I +L++ +P+ ++ AFL GW+LG+AV VFVA A+ LS
Sbjct 8 VLPLAIGVAISPIPIIATILMLLTPRAGSTATAFLAGWILGIAVGYVVFVAIGSAID-LS 66
Query 78 TTSPAWA--SWLRVVLGSALIVFGVLRWLTR---HRHTEMPGWMRAFASFTPARAGLVGA 132
+ S A + +R+VLG L+ V +W TR MP W+ A TP +A +G
Sbjct 67 SNSDGNAVTATIRLVLGVLLLALAVKQWRTRPAPGEEPSMPAWLAAIDKVTPGKALALGV 126
Query 133 VLVVVRPEVLIICAAAGLAIGSGGHGAAGSWIYTAFFAMLAASTVAIPILAYVAAGDRLD 192
L + P+ L++ A +A+ G + F +LAASTVA+P++ Y +R
Sbjct 127 GLSAINPKNLLMIVGAAVAVSQLDVGVGAKTVTGVVFTILAASTVAVPVVGYFTMRERAT 186
Query 193 DSLERLKDWMEKNHAGMVAAILVVIGLLLLYNGV 226
L+ LK W+ N+A ++A +L+VIG+ L+ G+
Sbjct 187 SWLQGLKVWLTANNAAVMAVLLLVIGVSLIGKGI 220
>gi|325673475|ref|ZP_08153166.1| hypothetical protein HMPREF0724_10948 [Rhodococcus equi ATCC
33707]
gi|325555496|gb|EGD25167.1| hypothetical protein HMPREF0724_10948 [Rhodococcus equi ATCC
33707]
Length=223
Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/214 (36%), Positives = 123/214 (58%), Gaps = 6/214 (2%)
Query 18 LVPLALVIALSPLSVIPAVLVVHSPQPRPSSLAFLGGWLLGLAVVTAVFVAASGALGGLS 77
++PLA+ +A+SP+ +I +L++ +P+ ++ AFL GW+LG+AV VFVA A+ LS
Sbjct 8 VLPLAIGVAISPIPIIATILMLLTPRAGSTATAFLAGWILGIAVGYVVFVAIGSAID-LS 66
Query 78 TTSPAWA--SWLRVVLGSALIVFGVLRWLTRHRHTE---MPGWMRAFASFTPARAGLVGA 132
+ S A + +R+VLG L+ V +W TR E MP W+ A TP +A +G
Sbjct 67 SNSDGNAVTATIRLVLGVLLLALAVKQWRTRPAPGEDPSMPAWLAAIDKVTPGKALALGV 126
Query 133 VLVVVRPEVLIICAAAGLAIGSGGHGAAGSWIYTAFFAMLAASTVAIPILAYVAAGDRLD 192
L + P+ L++ A +A+ G + F +LAASTVA+P++ Y +R
Sbjct 127 GLSAINPKNLLMIVGAAVAVSQLDVGVGAKTVTGVVFTILAASTVAVPVVGYFTMRERAT 186
Query 193 DSLERLKDWMEKNHAGMVAAILVVIGLLLLYNGV 226
L+ LK W+ N+A ++A +L+VIG+ L+ G+
Sbjct 187 SWLQGLKVWLTANNAAVMAVLLLVIGVSLIGKGI 220
>gi|336116079|ref|YP_004570845.1| hypothetical protein MLP_04280 [Microlunatus phosphovorus NM-1]
gi|334683857|dbj|BAK33442.1| hypothetical protein MLP_04280 [Microlunatus phosphovorus NM-1]
Length=223
Score = 101 bits (251), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 73/218 (34%), Positives = 132/218 (61%), Gaps = 4/218 (1%)
Query 13 SVLTGLVPLALVIALSPLSVIPAVLVVHSPQPRPSSLAFLGGWLLGLAVVTAVFVAASGA 72
V+ ++PLAL I +SP+ +I A+L++ SP+ + +S+ FL GW+LG+ +V AVF+ +
Sbjct 3 EVIGDILPLALGITISPIPIIAAILLLLSPKAKGTSVGFLVGWILGILIVLAVFILLASV 62
Query 73 LGGLSTTSPAWASW-LRVVLGSALIVFGVLRWLTRHR---HTEMPGWMRAFASFTPARAG 128
+ P S ++++LG+ ++V + +W R R MP WM A T A+
Sbjct 63 ITPADPDQPQPISGAIKLLLGALMLVLAIKQWRGRPRDGAEPSMPAWMSAIDQLTAAKGL 122
Query 129 LVGAVLVVVRPEVLIICAAAGLAIGSGGHGAAGSWIYTAFFAMLAASTVAIPILAYVAAG 188
+G +L V P+ L++ A+AG+ IGS G + + A F +AA++VA+P++ Y+AA
Sbjct 123 GLGLLLSAVNPKNLLMGASAGVTIGSAGLPFGSTVVTVALFTAIAAASVAVPVIGYLAAA 182
Query 189 DRLDDSLERLKDWMEKNHAGMVAAILVVIGLLLLYNGV 226
+ + LE L+ W+ N+A ++A +L+VIG++++ G+
Sbjct 183 EAMSGPLEELRCWLTSNNATVMAVLLLVIGVMMIGKGI 220
>gi|326384790|ref|ZP_08206466.1| hypothetical protein SCNU_17697 [Gordonia neofelifaecis NRRL
B-59395]
gi|326196452|gb|EGD53650.1| hypothetical protein SCNU_17697 [Gordonia neofelifaecis NRRL
B-59395]
Length=214
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/173 (34%), Positives = 98/173 (57%), Gaps = 4/173 (2%)
Query 54 GWLLGLAVVTAVFVAASGALGGLSTTSPAWASWLRVVLGSALIVFGVLRWLTRHRHTEMP 113
GW+LGLA T +F+ + G+S + W+++VLG L+ G+ +WLTR R P
Sbjct 41 GWVLGLASATGLFILLGRSAQGVSAVT----YWIQLVLGVLLVGEGLRQWLTRGRPRPTP 96
Query 114 GWMRAFASFTPARAGLVGAVLVVVRPEVLIICAAAGLAIGSGGHGAAGSWIYTAFFAMLA 173
W+ A PA +G + + P++L++CAAAG+AIG+ + F ++
Sbjct 97 RWLSAVDELVPAAGFGLGLAVSALNPKILVLCAAAGIAIGTTTAAVRDDVLALVVFTLVG 156
Query 174 ASTVAIPILAYVAAGDRLDDSLERLKDWMEKNHAGMVAAILVVIGLLLLYNGV 226
+ TV +P+ AY A DRL +L+RLK W++ ++ +VA +L+ IG++L +
Sbjct 157 SWTVLVPVAAYQIAADRLRGTLDRLKSWLDVHNRVVVAVLLITIGIVLTVRAI 209
>gi|226363618|ref|YP_002781400.1| hypothetical protein ROP_42080 [Rhodococcus opacus B4]
gi|226242107|dbj|BAH52455.1| hypothetical membrane protein [Rhodococcus opacus B4]
Length=221
Score = 95.5 bits (236), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 73/214 (35%), Positives = 129/214 (61%), Gaps = 1/214 (0%)
Query 13 SVLTGLVPLALVIALSPLSVIPAVLVVHSPQPRPSSLAFLGGWLLGLAVVTAVFVAASGA 72
SV+ L+PLA+ +A+SP+ +I +L++ S + +S F GW+LG+ V T +FV +G+
Sbjct 3 SVIGELLPLAVGVAISPIPIIAVILMLLSKRAGGASAGFGVGWILGIVVATGIFVLLAGS 62
Query 73 LGGLSTTSP-AWASWLRVVLGSALIVFGVLRWLTRHRHTEMPGWMRAFASFTPARAGLVG 131
+ + P A SW++VVLG L+V +W +R+ E P WM+A ++ +G
Sbjct 63 VDTSGSDGPSATVSWVKVVLGVLLLVLAGRQWRSRNADAEPPKWMQAIDDLNFVKSTGLG 122
Query 132 AVLVVVRPEVLIICAAAGLAIGSGGHGAAGSWIYTAFFAMLAASTVAIPILAYVAAGDRL 191
L + P+ L++C +AG+ IG+ G A + + +LA STV +P++AY A DR+
Sbjct 123 FALAAINPKNLLLCVSAGVGIGTAGVSAGEQVVALVVYVVLAGSTVLVPVVAYAVAADRM 182
Query 192 DDSLERLKDWMEKNHAGMVAAILVVIGLLLLYNG 225
+L+ LK W++ N+A +++ +L+V+G ++L G
Sbjct 183 RGTLDSLKVWLQANNAAVMSVLLLVMGAVVLGKG 216
>gi|258651397|ref|YP_003200553.1| hypothetical protein Namu_1157 [Nakamurella multipartita DSM
44233]
gi|258554622|gb|ACV77564.1| hypothetical protein Namu_1157 [Nakamurella multipartita DSM
44233]
Length=217
Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/213 (36%), Positives = 127/213 (60%), Gaps = 2/213 (0%)
Query 14 VLTGLVPLALVIALSPLSVIPAVLVVHSPQPRPSSLAFLGGWLLGLAVVTAVFVAASGAL 73
V+ ++PLA+ IA+SP++++ A+L++ S +SL L GW++G+ VF +G +
Sbjct 4 VIGDVLPLAIAIAISPIAIVAAILMLFSTHAGSTSLGLLIGWVVGIVAAVTVFTVITGGV 63
Query 74 GGLSTTSPAWASWLRVVLGSALIVFGVLRWLTRHRHTEMPGWMRAFASFTPARAGLVGAV 133
+ S A SW++V LG+ L+ G+ +W R RH P WM A +A +G
Sbjct 64 D--AGQSQAGVSWVKVGLGAVLMSAGLRQWHARDRHRSAPKWMAAIDRMGFVQALGLGLA 121
Query 134 LVVVRPEVLIICAAAGLAIGSGGHGAAGSWIYTAFFAMLAASTVAIPILAYVAAGDRLDD 193
L + P+ L++ AAAG+AIG+ A + + A + ++AASTVAIP++AY DR+
Sbjct 122 LAAINPKNLLMAAAAGIAIGAAELSVADTVVVVAIYTVIAASTVAIPVVAYAVTRDRMRA 181
Query 194 SLERLKDWMEKNHAGMVAAILVVIGLLLLYNGV 226
L+R K W+E N+A +++ + +VIG +L+ G+
Sbjct 182 PLDRAKSWLEANNAAVMSVLFLVIGAVLVGKGI 214
>gi|336120340|ref|YP_004575123.1| hypothetical protein MLP_47060 [Microlunatus phosphovorus NM-1]
gi|334688135|dbj|BAK37720.1| hypothetical protein MLP_47060 [Microlunatus phosphovorus NM-1]
Length=222
Score = 92.4 bits (228), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 73/221 (34%), Positives = 117/221 (53%), Gaps = 5/221 (2%)
Query 13 SVLTGLVPLALVIALSPLSVIPAVLVVHSPQPRPSSLAFLGGWLLGLAVVTAVFVAASGA 72
V+ L+P A+ +ALSPL +I +LV+ S PR +S F+ G + +A V + A+
Sbjct 3 DVVGDLIPFAVGVALSPLPLIAVLLVLGSSSPRAASAFFMVGRYVTVAAVALLAAFAAEL 62
Query 73 LGGLSTTSPAWASWLRVVLGSALI---VFGVLRWLT-RHRHTEMPGWMRAFASFTPARAG 128
L T P + LR+VLG+ LI V + W R R E+PGWM + TP A
Sbjct 63 LPEQGDT-PFVGAVLRIVLGAVLIGWAVHKTVHWAGGRDREPELPGWMASIQGTTPPGAA 121
Query 129 LVGAVLVVVRPEVLIICAAAGLAIGSGGHGAAGSWIYTAFFAMLAASTVAIPILAYVAAG 188
+ +L V + + AGL I +G G + + +A+LA V + Y+ A
Sbjct 122 RLAIILSAVNVKEVAFGVGAGLTIAAGRPGPGAAVVVALCYAVLACVGVIAVAVCYLVAA 181
Query 189 DRLDDSLERLKDWMEKNHAGMVAAILVVIGLLLLYNGVHAM 229
DR+ +LER++DW+ N+ ++A +L+VIG +L+ G+ A+
Sbjct 182 DRVGPALERVRDWLVANNKIIIAGVLLVIGAILMGEGLRAL 222
>gi|256395681|ref|YP_003117245.1| hypothetical protein Caci_6558 [Catenulispora acidiphila DSM
44928]
gi|256361907|gb|ACU75404.1| conserved hypothetical protein [Catenulispora acidiphila DSM
44928]
Length=223
Score = 89.7 bits (221), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/197 (32%), Positives = 95/197 (49%), Gaps = 4/197 (2%)
Query 25 IALSPLSVIPAVLVVHSPQPRPSSLAFLGGWLLGLAVVTAVFVAASGALGGLSTTSPA-W 83
+A+SPL +I VL++ +P+ R LAF GWLL L +V V + ++PA W
Sbjct 15 VAISPLPLIAMVLLLATPRGRADGLAFCAGWLLSLTLVGTVMLLIGAGEDADEGSAPATW 74
Query 84 ASWLRVVLGSALIVFGVLRWLTR---HRHTEMPGWMRAFASFTPARAGLVGAVLVVVRPE 140
SWL +VLG V +W R R PGWM TPARA +GA+L P+
Sbjct 75 VSWLTLVLGVLFAFLAVGQWKARPRPGRPARTPGWMAGLDRTTPARAAGLGALLSGANPK 134
Query 141 VLIICAAAGLAIGSGGHGAAGSWIYTAFFAMLAASTVAIPILAYVAAGDRLDDSLERLKD 200
L + A I + F ++ + V +P+ Y+A G + +LE KD
Sbjct 135 NLALTVGAAAGIAGATSQPGARAVALVLFVLIGSLCVLVPLGVYLAGGKKAAATLEGWKD 194
Query 201 WMEKNHAGMVAAILVVI 217
WM ++A ++ +L V+
Sbjct 195 WMATHNAAIMTTVLAVL 211
>gi|284042993|ref|YP_003393333.1| hypothetical protein Cwoe_1530 [Conexibacter woesei DSM 14684]
gi|283947214|gb|ADB49958.1| hypothetical protein Cwoe_1530 [Conexibacter woesei DSM 14684]
Length=223
Score = 89.7 bits (221), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/209 (34%), Positives = 110/209 (53%), Gaps = 4/209 (1%)
Query 25 IALSPLSVIPAVLVVHSPQPRPSSLAFLGGWLLGLAVV-TAVFVAASGALGGLSTTSPAW 83
+ALSP+ +I VL++ +P+ R + AF+ GW+LG+AVV T V + A GA W
Sbjct 15 VALSPIPIIAVVLMLATPRGRVNGPAFILGWVLGIAVVGTIVLLVAGGADASEGGEPATW 74
Query 84 ASWLRVVLGSALIVFGVLRWLTRHRHTE---MPGWMRAFASFTPARAGLVGAVLVVVRPE 140
S L++VLG L+ +W R R TE +PGWMR FTP RA + L + P+
Sbjct 75 VSILKLVLGVLLLGLAWKQWKGRPRGTEQARLPGWMRTIDGFTPPRAIAMAVALSAINPK 134
Query 141 VLIICAAAGLAIGSGGHGAAGSWIYTAFFAMLAASTVAIPILAYVAAGDRLDDSLERLKD 200
L++ A AI G G + A F ++A +P+ Y G+R L+ LK
Sbjct 135 NLVLVVGAAAAIAQTGAGTGDQAVALAVFTLVATLGPGLPVAIYFGLGERATAILDELKT 194
Query 201 WMEKNHAGMVAAILVVIGLLLLYNGVHAM 229
WM +N+ ++ I ++IG L+ +G+ +
Sbjct 195 WMSRNNGVIMTVIALIIGAKLIGDGISGL 223
>gi|229818717|ref|YP_002880243.1| hypothetical protein Bcav_0216 [Beutenbergia cavernae DSM 12333]
gi|229564630|gb|ACQ78481.1| conserved hypothetical protein [Beutenbergia cavernae DSM 12333]
Length=223
Score = 89.0 bits (219), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 66/208 (32%), Positives = 116/208 (56%), Gaps = 3/208 (1%)
Query 13 SVLTGLVPLALVIALSPLSVIPAVLVVHSPQPRPSSLAFLGGWLLGLAVVTAVFVAASGA 72
VL +PLA+ IALSPL VI +L++ P+ + F ++ LAV+ + VAAS A
Sbjct 6 EVLGATLPLAVAIALSPLPVIALLLLLSGPRGTAAGTLFALSRVIALAVLLGIVVAASDA 65
Query 73 LGGLSTTSPAWASWLRVVLGSALIVFGVLRWLTRHR--HTEMPGWMRAFASFTPARAGLV 130
+ L T + + + +R+V+G+AL+V G+ RW R E+P W+ + P+R ++
Sbjct 66 VEHL-TGAASLPAVVRLVIGAALVVLGLTRWRPRPDDGEPELPRWLASITEAPPSRGLVL 124
Query 131 GAVLVVVRPEVLIICAAAGLAIGSGGHGAAGSWIYTAFFAMLAASTVAIPILAYVAAGDR 190
GA++ + P+ L AAG+++G A +++A +V P++A V A R
Sbjct 125 GAIVTISNPKELAFLLAAGVSLGGSAVSGLQEVGIAALLVVISALSVLAPLVAMVVAPHR 184
Query 191 LDDSLERLKDWMEKNHAGMVAAILVVIG 218
+ +L+RL+ W+ N + ++ +L+VIG
Sbjct 185 VAPALDRLRRWLTTNTSLVMGVLLIVIG 212
>gi|311896827|dbj|BAJ29235.1| hypothetical protein KSE_34280 [Kitasatospora setae KM-6054]
Length=222
Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/212 (30%), Positives = 113/212 (54%), Gaps = 6/212 (2%)
Query 22 ALVIALSPLSVIPAVLVVHSPQPRPSSLAFLGGWLLGL-AVVTAVFVAASGALGGLSTTS 80
A+ IA+SPL +I +L++ +P+ R + +AF GW++ L AV TAV +A SG S +
Sbjct 12 AVGIAISPLPLIAVILMLATPRGRSNGIAFTAGWVVALGAVTTAVVLAGSGI--DSSAGT 69
Query 81 PAWASWLRVVLGSALIVFGVLRWLTRHR---HTEMPGWMRAFASFTPARAGLVGAVLVVV 137
P W+ W+++ LG ++ +W R R E PGWMRA F P ++ + AVLV
Sbjct 70 PDWSYWVKLGLGVLFLLLAARQWRGRPRAGQTAEQPGWMRAIDRFGPPKSAGLAAVLVAA 129
Query 138 RPEVLIICAAAGLAIGSGGHGAAGSWIYTAFFAMLAASTVAIPILAYVAAGDRLDDSLER 197
P+ L++ ++I + G G + A ++ + +P+ Y+ G R + L
Sbjct 130 NPKNLVLAVGGAVSIATSGASGGGKAVAGALLVLIGSLCTLLPLGVYLLGGARATEVLGG 189
Query 198 LKDWMEKNHAGMVAAILVVIGLLLLYNGVHAM 229
K WM +++ ++ +L+V+G+ + + V +
Sbjct 190 WKAWMSAHNSAIMIVLLLVLGVKYVGDAVSGL 221
>gi|169627859|ref|YP_001701508.1| hypothetical protein MAB_0758 [Mycobacterium abscessus ATCC 19977]
gi|169239826|emb|CAM60854.1| Conserved hypothetical protein [Mycobacterium abscessus]
Length=59
Score = 86.3 bits (212), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 37/56 (67%), Positives = 53/56 (95%), Gaps = 0/56 (0%)
Query 174 ASTVAIPILAYVAAGDRLDDSLERLKDWMEKNHAGMVAAILVVIGLLLLYNGVHAM 229
+++VA+PILAYVAAG RLDD++ RLKDWM+KN+A ++AAIL+VIG+++LYNG+HA+
Sbjct 3 SASVAVPILAYVAAGHRLDDAMRRLKDWMDKNNAALMAAILIVIGVMVLYNGIHAL 58
>gi|229819255|ref|YP_002880781.1| hypothetical protein Bcav_0758 [Beutenbergia cavernae DSM 12333]
gi|229565168|gb|ACQ79019.1| conserved hypothetical protein [Beutenbergia cavernae DSM 12333]
Length=223
Score = 84.7 bits (208), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 64/215 (30%), Positives = 124/215 (58%), Gaps = 4/215 (1%)
Query 19 VPLALVIALSPLSVIPAVLVVHSPQPRPSSLAFLGGWLLGLAVV-TAVFVAASGALGGLS 77
+P+A+ + +SP+ ++ VL++ + + R ++ +FL GW++G+A+V T V + GA
Sbjct 9 LPIAVGVLVSPMPIVAVVLMLVTKRARSNAFSFLLGWVVGVALVGTLVILLMGGAADSDD 68
Query 78 TTSPAWASWLRVVLGSALIVFGVLRWLTRHRHTEMP---GWMRAFASFTPARAGLVGAVL 134
+P WA+ +++VLG L++ + +W R + E P WM A FTP +A + +L
Sbjct 69 GGTPLWAAIVKIVLGVGLLLLALKQWRGRPKRGEEPPAPRWMAAIEGFTPPKAFGLAFLL 128
Query 135 VVVRPEVLIICAAAGLAIGSGGHGAAGSWIYTAFFAMLAASTVAIPILAYVAAGDRLDDS 194
+ P+ L++ + AI S + ++ A F ++A VA P++ Y+A G R
Sbjct 129 GAINPKNLLLVVSGAAAIVSATSERSDQFVALAVFVVVATIGVAAPVVVYLAMGTRAGAV 188
Query 195 LERLKDWMEKNHAGMVAAILVVIGLLLLYNGVHAM 229
L+ LK WM +N+A ++ +L+V+G+ ++ +G+ A+
Sbjct 189 LDDLKHWMVQNNAAIMTVLLLVLGMKMIGDGIGAL 223
>gi|226308704|ref|YP_002768664.1| hypothetical protein RER_52170 [Rhodococcus erythropolis PR4]
gi|226187821|dbj|BAH35925.1| hypothetical membrane protein [Rhodococcus erythropolis PR4]
Length=225
Score = 78.6 bits (192), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/216 (29%), Positives = 105/216 (49%), Gaps = 7/216 (3%)
Query 19 VPLALVIALSPLSVIPAVLVVHSPQPRPSSLAFLGGWLLGLAVVTAVFVAASGALGGLST 78
+ L L+ P++VI VLV+ + +++FL GW+LG++ V AV + + S
Sbjct 11 IALGLLFVSMPMAVI--VLVMITAGAHRGAVSFLLGWVLGISAVVAVTIVIADYSFAESE 68
Query 79 TSPA--WASWLRVVLGSALIVFGVLRWLTRHRHTE---MPGWMRAFASFTPARAGLVGAV 133
+S A W+S +R+VLG L +W R R +P WM++ TP +A + +
Sbjct 69 SSQASVWSSVVRIVLGLVLFGLAYKQWRARPRDGSDPTVPKWMKSIDGLTPRKAFGLAFL 128
Query 134 LVVVRPEVLIICAAAGLAIGSGGHGAAGSWIYTAFFAMLAASTVAIPILAYVAAGDRLDD 193
V P+ + + I + A + F ++A+ +A PIL V +G R D+
Sbjct 129 SAAVNPKNAALAVSGAATIAVATNVVAQQIVAAVIFTVIASVGIASPILVKVFSGKRADE 188
Query 194 SLERLKDWMEKNHAGMVAAILVVIGLLLLYNGVHAM 229
L K WM N+A M+ IL ++G +L G+ +
Sbjct 189 ILASAKSWMTANNAVMMTVILAILGATVLGEGLSGL 224
>gi|229488938|ref|ZP_04382804.1| conserved hypothetical protein [Rhodococcus erythropolis SK121]
gi|229324442|gb|EEN90197.1| conserved hypothetical protein [Rhodococcus erythropolis SK121]
Length=225
Score = 76.3 bits (186), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/218 (29%), Positives = 109/218 (50%), Gaps = 11/218 (5%)
Query 19 VPLALVIALSPLSVIPAVLVVHSPQPRPSSLAFLGGWLLGLAVVTAV--FVAASGALGGL 76
+ L L+ P++VI VLV+ + + +FL GW+LG++ V AV +A
Sbjct 11 IALGLLFVSMPMAVI--VLVMITAGAHRGAASFLLGWVLGISAVVAVTIVIADYSFAESE 68
Query 77 STTSPAWASWLRVVLGSALIVFGV--LRWLTRHRHTE---MPGWMRAFASFTPARAGLVG 131
S+ + W+S +R+VLG L++FG+ +W R R+ +P WM++ TP +A +
Sbjct 69 SSQTSMWSSVVRIVLG--LVLFGLAYKQWRARPRNGSEPTVPKWMKSVDGLTPRKAFGLA 126
Query 132 AVLVVVRPEVLIICAAAGLAIGSGGHGAAGSWIYTAFFAMLAASTVAIPILAYVAAGDRL 191
+ V P+ + + I + A + F ++A+ +A PIL V +G R
Sbjct 127 FLSAAVNPKNAALAVSGAATIAVATNVVAQQIVAAVIFTVIASVGIASPILVKVFSGKRA 186
Query 192 DDSLERLKDWMEKNHAGMVAAILVVIGLLLLYNGVHAM 229
D+ L K WM N+A M+ IL ++G +L G+ +
Sbjct 187 DEILASAKAWMTANNAVMMTVILTILGATVLGEGLSGL 224
>gi|271965848|ref|YP_003340044.1| hypothetical protein Sros_4431 [Streptosporangium roseum DSM
43021]
gi|270509023|gb|ACZ87301.1| hypothetical protein Sros_4431 [Streptosporangium roseum DSM
43021]
Length=225
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/212 (33%), Positives = 110/212 (52%), Gaps = 8/212 (3%)
Query 21 LALVIALSPLSVIPAVLVVHSPQPRPSSLAFLGGWLLGLAVVTAVFVAASGALGGLSTTS 80
LA +A+SPL ++ +LV+ +PQ R + L F GWL GL+ + + +A GA G +
Sbjct 11 LAAGVAVSPLPIVAIILVLATPQGRLNGLLFTLGWLAGLSALGGIMLAIGGAGGSSTHHQ 70
Query 81 PA-WASWLRVVLGSALIVFGVLRWLTRHR-----HTEMPGWMRAFASFTPARAGLVGAVL 134
PA W L++VLG L++FG +W RHR E+P WM A FTP + +G L
Sbjct 71 PATWVGGLKLVLGLLLVLFGTRQW--RHRPKGATQAELPKWMAAIDRFTPIKVLGLGLAL 128
Query 135 VVVRPEVLIICAAAGLAIGSGGHGAAGSWIYTAFFAMLAASTVAIPILAYVAAGDRLDDS 194
+ + AA +I + G A A F ++ + + P+ ++ GD+
Sbjct 129 SAANLKNAPLTLAAAASISASGLPAGQQIASLAVFVIIGSLGLLAPLGVFLFMGDQAKTV 188
Query 195 LERLKDWMEKNHAGMVAAILVVIGLLLLYNGV 226
L KDW +++ ++AA+ V+GL LL +G+
Sbjct 189 LGGWKDWAAQHNVAVMAALFFVLGLKLLGDGI 220
>gi|302562765|ref|ZP_07315107.1| integral membrane protein [Streptomyces griseoflavus Tu4000]
gi|302480383|gb|EFL43476.1| integral membrane protein [Streptomyces griseoflavus Tu4000]
Length=225
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/209 (33%), Positives = 105/209 (51%), Gaps = 4/209 (1%)
Query 25 IALSPLSVIPAVLVVHSPQPRPSSLAFLGGWLLGLAVVTAVFVAASGALGGLSTTSPA-W 83
+ALS +I VL++ +P+ R + A L GW LGLA+V + + SG G PA W
Sbjct 15 VALSAFPIIGVVLMLATPRARSNGPAMLLGWALGLALVGTIVLLVSGGAGPTDQGQPADW 74
Query 84 ASWLRVVLGSALIVFGVLRWLTRHRHTE---MPGWMRAFASFTPARAGLVGAVLVVVRPE 140
S L + LG L+ V W R R + +P WMR SFTP +A +G L + P+
Sbjct 75 VSALDIALGVLLLWVAVKEWRGRPRSDQEVTLPKWMRTVDSFTPVKALALGTALSALNPK 134
Query 141 VLIICAAAGLAIGSGGHGAAGSWIYTAFFAMLAASTVAIPILAYVAAGDRLDDSLERLKD 200
L++ AA AI G A + A + +L A P++ Y +R L+ LK
Sbjct 135 NLLLSIAAASAIARTGTSAGAQAVALAVYVVLGALGPGAPVVLYFVLKERSKHILDGLKL 194
Query 201 WMEKNHAGMVAAILVVIGLLLLYNGVHAM 229
WME+N+ ++A I ++ L+ +G+ +
Sbjct 195 WMERNNTAIIAVICLLFAAKLVGDGISDL 223
>gi|315280805|ref|ZP_07869598.1| membrane protein, putative [Listeria marthii FSL S4-120]
gi|313615541|gb|EFR88893.1| membrane protein, putative [Listeria marthii FSL S4-120]
Length=219
Score = 69.3 bits (168), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/213 (24%), Positives = 108/213 (51%), Gaps = 9/213 (4%)
Query 13 SVLTGLVPLALVIALSPLSVIPAVLVVHSPQPRPSSLAFLGGWLLGLAVVTAVFVAASGA 72
S + ++ A+ I +SP ++ +L++ S + R +S+ + GW++G A+F
Sbjct 3 SAFSAILSPAVGILISPFPIVGLILILLSNKARINSIFYTVGWIVG---NIAIFFIGLFL 59
Query 73 LGGLSTTSPAWASWLRVVLGSALIVFGVL---RWLTRHRHTEM---PGWMRAFASFTPAR 126
+ ++S ++ ++VVL + +L + R R+ E P W ++ P
Sbjct 60 MSSAVSSSGDQSTLVKVVLIVLGALLILLGAHDFTKRPRNGETAATPKWFEKMSNIKPGG 119
Query 127 AGLVGAVLVVVRPEVLIICAAAGLAIGSGGHGAAGSWIYTAFFAMLAASTVAIPILAYVA 186
A + VL V P+ +++ AG+++G+ T F ++A ++ IP +A++
Sbjct 120 AMIFAFVLSAVNPKNMLLSLTAGVSVGALNLSGGQETTATIIFGIIACCSIYIPTIAFLL 179
Query 187 AGDRLDDSLERLKDWMEKNHAGMVAAILVVIGL 219
AG RL++ L+ + W+ +N++ ++A + + IGL
Sbjct 180 AGKRLNNVLDSTRKWLIQNNSVIMAVLFLFIGL 212
Lambda K H
0.326 0.138 0.435
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 297403917052
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40