BLASTP 2.2.25+


Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.



Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
           15,229,318 sequences; 5,219,829,388 total letters



Query= Rv3481c

Length=229
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

gi|167967261|ref|ZP_02549538.1|  hypothetical integral membrane p...   436    1e-120
gi|148824689|ref|YP_001289443.1|  hypothetical protein TBFG_13516...   436    1e-120
gi|15610617|ref|NP_217998.1|  integral membrane protein [Mycobact...   435    2e-120
gi|118619230|ref|YP_907562.1|  hypothetical protein MUL_4034 [Myc...   300    9e-80 
gi|240170027|ref|ZP_04748686.1|  hypothetical protein MkanA1_1199...   293    2e-77 
gi|342859195|ref|ZP_08715849.1|  hypothetical protein MCOL_09963 ...   265    4e-69 
gi|296167693|ref|ZP_06849939.1|  conserved hypothetical protein [...   260    8e-68 
gi|254821950|ref|ZP_05226951.1|  hypothetical protein MintA_18602...   259    3e-67 
gi|41409905|ref|NP_962741.1|  hypothetical protein MAP3807 [Mycob...   253    1e-65 
gi|108797453|ref|YP_637650.1|  hypothetical protein Mmcs_0473 [My...   253    1e-65 
gi|254821951|ref|ZP_05226952.1|  hypothetical protein MintA_18607...   253    1e-65 
gi|118463847|ref|YP_883964.1|  hypothetical protein MAV_4839 [Myc...   253    2e-65 
gi|336460231|gb|EGO39134.1|  Protein of unknown function (DUF2910...   252    4e-65 
gi|254777277|ref|ZP_05218793.1|  hypothetical protein MaviaA2_217...   251    4e-65 
gi|41409904|ref|NP_962740.1|  hypothetical protein MAP3806 [Mycob...   251    7e-65 
gi|296167692|ref|ZP_06849938.1|  conserved hypothetical protein [...   249    2e-64 
gi|342859194|ref|ZP_08715848.1|  hypothetical protein MCOL_09958 ...   246    2e-63 
gi|336460232|gb|EGO39135.1|  Protein of unknown function (DUF2910...   243    1e-62 
gi|118465551|ref|YP_883965.1|  hypothetical protein MAV_4841 [Myc...   243    2e-62 
gi|118472749|ref|YP_885135.1|  hypothetical protein MSMEG_0729 [M...   242    3e-62 
gi|120401658|ref|YP_951487.1|  hypothetical protein Mvan_0642 [My...   241    6e-62 
gi|333988984|ref|YP_004521598.1|  hypothetical protein JDM601_034...   238    4e-61 
gi|145220856|ref|YP_001131534.1|  hypothetical protein Mflv_0252 ...   221    6e-56 
gi|226309132|ref|YP_002769092.1|  hypothetical protein RER_56450 ...   140    2e-31 
gi|229491566|ref|ZP_04385387.1|  putative membrane protein [Rhodo...   140    2e-31 
gi|258652796|ref|YP_003201952.1|  hypothetical protein Namu_2611 ...   133    2e-29 
gi|226306156|ref|YP_002766116.1|  hypothetical protein RER_26690 ...   132    5e-29 
gi|111021272|ref|YP_704244.1|  hypothetical protein RHA1_ro04295 ...   117    1e-24 
gi|229490836|ref|ZP_04384671.1|  putative membrane protein [Rhodo...   113    3e-23 
gi|296167302|ref|ZP_06849704.1|  hypothetical protein HMPREF0591_...   111    9e-23 
gi|326384789|ref|ZP_08206465.1|  hypothetical protein SCNU_17692 ...   110    1e-22 
gi|326780062|ref|ZP_08239327.1|  Protein of unknown function DUF2...   107    9e-22 
gi|312139219|ref|YP_004006555.1|  integral membrane protein [Rhod...   103    3e-20 
gi|325673475|ref|ZP_08153166.1|  hypothetical protein HMPREF0724_...   103    3e-20 
gi|336116079|ref|YP_004570845.1|  hypothetical protein MLP_04280 ...   101    9e-20 
gi|326384790|ref|ZP_08206466.1|  hypothetical protein SCNU_17697 ...   100    2e-19 
gi|226363618|ref|YP_002781400.1|  hypothetical protein ROP_42080 ...  95.5    5e-18 
gi|258651397|ref|YP_003200553.1|  hypothetical protein Namu_1157 ...  93.6    2e-17 
gi|336120340|ref|YP_004575123.1|  hypothetical protein MLP_47060 ...  92.4    4e-17 
gi|256395681|ref|YP_003117245.1|  hypothetical protein Caci_6558 ...  89.7    3e-16 
gi|284042993|ref|YP_003393333.1|  hypothetical protein Cwoe_1530 ...  89.7    3e-16 
gi|229818717|ref|YP_002880243.1|  hypothetical protein Bcav_0216 ...  89.0    5e-16 
gi|311896827|dbj|BAJ29235.1|  hypothetical protein KSE_34280 [Kit...  87.8    1e-15 
gi|169627859|ref|YP_001701508.1|  hypothetical protein MAB_0758 [...  86.3    3e-15 
gi|229819255|ref|YP_002880781.1|  hypothetical protein Bcav_0758 ...  84.7    9e-15 
gi|226308704|ref|YP_002768664.1|  hypothetical protein RER_52170 ...  78.6    7e-13 
gi|229488938|ref|ZP_04382804.1|  conserved hypothetical protein [...  76.3    3e-12 
gi|271965848|ref|YP_003340044.1|  hypothetical protein Sros_4431 ...  74.7    1e-11 
gi|302562765|ref|ZP_07315107.1|  integral membrane protein [Strep...  73.9    2e-11 
gi|315280805|ref|ZP_07869598.1|  membrane protein, putative [List...  69.3    4e-10 


>gi|167967261|ref|ZP_02549538.1| hypothetical integral membrane protein [Mycobacterium tuberculosis 
H37Ra]
 gi|253800524|ref|YP_003033525.1| hypothetical protein TBMG_03527 [Mycobacterium tuberculosis KZN 
1435]
 gi|254552583|ref|ZP_05143030.1| hypothetical protein Mtube_19405 [Mycobacterium tuberculosis 
'98-R604 INH-RIF-EM']
 6 more sequence titles
 Length=248

 Score =  436 bits (1122),  Expect = 1e-120, Method: Compositional matrix adjust.
 Identities = 229/229 (100%), Positives = 229/229 (100%), Gaps = 0/229 (0%)

Query  1    MRGLLPVAGHWVSVLTGLVPLALVIALSPLSVIPAVLVVHSPQPRPSSLAFLGGWLLGLA  60
            MRGLLPVAGHWVSVLTGLVPLALVIALSPLSVIPAVLVVHSPQPRPSSLAFLGGWLLGLA
Sbjct  20   MRGLLPVAGHWVSVLTGLVPLALVIALSPLSVIPAVLVVHSPQPRPSSLAFLGGWLLGLA  79

Query  61   VVTAVFVAASGALGGLSTTSPAWASWLRVVLGSALIVFGVLRWLTRHRHTEMPGWMRAFA  120
            VVTAVFVAASGALGGLSTTSPAWASWLRVVLGSALIVFGVLRWLTRHRHTEMPGWMRAFA
Sbjct  80   VVTAVFVAASGALGGLSTTSPAWASWLRVVLGSALIVFGVLRWLTRHRHTEMPGWMRAFA  139

Query  121  SFTPARAGLVGAVLVVVRPEVLIICAAAGLAIGSGGHGAAGSWIYTAFFAMLAASTVAIP  180
            SFTPARAGLVGAVLVVVRPEVLIICAAAGLAIGSGGHGAAGSWIYTAFFAMLAASTVAIP
Sbjct  140  SFTPARAGLVGAVLVVVRPEVLIICAAAGLAIGSGGHGAAGSWIYTAFFAMLAASTVAIP  199

Query  181  ILAYVAAGDRLDDSLERLKDWMEKNHAGMVAAILVVIGLLLLYNGVHAM  229
            ILAYVAAGDRLDDSLERLKDWMEKNHAGMVAAILVVIGLLLLYNGVHAM
Sbjct  200  ILAYVAAGDRLDDSLERLKDWMEKNHAGMVAAILVVIGLLLLYNGVHAM  248


>gi|148824689|ref|YP_001289443.1| hypothetical protein TBFG_13516 [Mycobacterium tuberculosis F11]
 gi|254366830|ref|ZP_04982871.1| hypothetical integral membrane protein [Mycobacterium tuberculosis 
str. Haarlem]
 gi|308232475|ref|ZP_07416167.2| membrane protein [Mycobacterium tuberculosis SUMu001]
 27 more sequence titles
 Length=236

 Score =  436 bits (1121),  Expect = 1e-120, Method: Compositional matrix adjust.
 Identities = 229/229 (100%), Positives = 229/229 (100%), Gaps = 0/229 (0%)

Query  1    MRGLLPVAGHWVSVLTGLVPLALVIALSPLSVIPAVLVVHSPQPRPSSLAFLGGWLLGLA  60
            MRGLLPVAGHWVSVLTGLVPLALVIALSPLSVIPAVLVVHSPQPRPSSLAFLGGWLLGLA
Sbjct  8    MRGLLPVAGHWVSVLTGLVPLALVIALSPLSVIPAVLVVHSPQPRPSSLAFLGGWLLGLA  67

Query  61   VVTAVFVAASGALGGLSTTSPAWASWLRVVLGSALIVFGVLRWLTRHRHTEMPGWMRAFA  120
            VVTAVFVAASGALGGLSTTSPAWASWLRVVLGSALIVFGVLRWLTRHRHTEMPGWMRAFA
Sbjct  68   VVTAVFVAASGALGGLSTTSPAWASWLRVVLGSALIVFGVLRWLTRHRHTEMPGWMRAFA  127

Query  121  SFTPARAGLVGAVLVVVRPEVLIICAAAGLAIGSGGHGAAGSWIYTAFFAMLAASTVAIP  180
            SFTPARAGLVGAVLVVVRPEVLIICAAAGLAIGSGGHGAAGSWIYTAFFAMLAASTVAIP
Sbjct  128  SFTPARAGLVGAVLVVVRPEVLIICAAAGLAIGSGGHGAAGSWIYTAFFAMLAASTVAIP  187

Query  181  ILAYVAAGDRLDDSLERLKDWMEKNHAGMVAAILVVIGLLLLYNGVHAM  229
            ILAYVAAGDRLDDSLERLKDWMEKNHAGMVAAILVVIGLLLLYNGVHAM
Sbjct  188  ILAYVAAGDRLDDSLERLKDWMEKNHAGMVAAILVVIGLLLLYNGVHAM  236


>gi|15610617|ref|NP_217998.1| integral membrane protein [Mycobacterium tuberculosis H37Rv]
 gi|15843093|ref|NP_338130.1| hypothetical protein MT3585 [Mycobacterium tuberculosis CDC1551]
 gi|31794657|ref|NP_857150.1| integral membrane protein [Mycobacterium bovis AF2122/97]
 41 more sequence titles
 Length=229

 Score =  435 bits (1119),  Expect = 2e-120, Method: Compositional matrix adjust.
 Identities = 229/229 (100%), Positives = 229/229 (100%), Gaps = 0/229 (0%)

Query  1    MRGLLPVAGHWVSVLTGLVPLALVIALSPLSVIPAVLVVHSPQPRPSSLAFLGGWLLGLA  60
            MRGLLPVAGHWVSVLTGLVPLALVIALSPLSVIPAVLVVHSPQPRPSSLAFLGGWLLGLA
Sbjct  1    MRGLLPVAGHWVSVLTGLVPLALVIALSPLSVIPAVLVVHSPQPRPSSLAFLGGWLLGLA  60

Query  61   VVTAVFVAASGALGGLSTTSPAWASWLRVVLGSALIVFGVLRWLTRHRHTEMPGWMRAFA  120
            VVTAVFVAASGALGGLSTTSPAWASWLRVVLGSALIVFGVLRWLTRHRHTEMPGWMRAFA
Sbjct  61   VVTAVFVAASGALGGLSTTSPAWASWLRVVLGSALIVFGVLRWLTRHRHTEMPGWMRAFA  120

Query  121  SFTPARAGLVGAVLVVVRPEVLIICAAAGLAIGSGGHGAAGSWIYTAFFAMLAASTVAIP  180
            SFTPARAGLVGAVLVVVRPEVLIICAAAGLAIGSGGHGAAGSWIYTAFFAMLAASTVAIP
Sbjct  121  SFTPARAGLVGAVLVVVRPEVLIICAAAGLAIGSGGHGAAGSWIYTAFFAMLAASTVAIP  180

Query  181  ILAYVAAGDRLDDSLERLKDWMEKNHAGMVAAILVVIGLLLLYNGVHAM  229
            ILAYVAAGDRLDDSLERLKDWMEKNHAGMVAAILVVIGLLLLYNGVHAM
Sbjct  181  ILAYVAAGDRLDDSLERLKDWMEKNHAGMVAAILVVIGLLLLYNGVHAM  229


>gi|118619230|ref|YP_907562.1| hypothetical protein MUL_4034 [Mycobacterium ulcerans Agy99]
 gi|183984929|ref|YP_001853220.1| hypothetical protein MMAR_4961 [Mycobacterium marinum M]
 gi|118571340|gb|ABL06091.1| conserved membrane protein [Mycobacterium ulcerans Agy99]
 gi|183178255|gb|ACC43365.1| conserved membrane protein [Mycobacterium marinum M]
Length=229

 Score =  300 bits (769),  Expect = 9e-80, Method: Compositional matrix adjust.
 Identities = 150/229 (66%), Positives = 188/229 (83%), Gaps = 0/229 (0%)

Query  1    MRGLLPVAGHWVSVLTGLVPLALVIALSPLSVIPAVLVVHSPQPRPSSLAFLGGWLLGLA  60
            MR LLPV G+  SVL  LVPLALVIA+SP+++IPAVLV+H+P+PRP+ LAFLGGW+LGL 
Sbjct  1    MRKLLPVTGNSGSVLASLVPLALVIAVSPITIIPAVLVLHAPRPRPTGLAFLGGWVLGLI  60

Query  61   VVTAVFVAASGALGGLSTTSPAWASWLRVVLGSALIVFGVLRWLTRHRHTEMPGWMRAFA  120
             VTA+FVA S   GGL  + PAWASW R+V+GS LI+FG+ RWL RH   E P WMR+FA
Sbjct  61   AVTAMFVAGSELFGGLRRSPPAWASWARIVVGSLLILFGIYRWLNRHGEVESPRWMRSFA  120

Query  121  SFTPARAGLVGAVLVVVRPEVLIICAAAGLAIGSGGHGAAGSWIYTAFFAMLAASTVAIP  180
            + TP RAG+  AVLV+VRPEV+IIC AAGLAIG+GG G A  W+  A F  ++ASTVA P
Sbjct  121  TITPRRAGITAAVLVLVRPEVVIICLAAGLAIGTGGLGVAMRWVCGAIFVAISASTVAGP  180

Query  181  ILAYVAAGDRLDDSLERLKDWMEKNHAGMVAAILVVIGLLLLYNGVHAM  229
            ILA+V AGDRL+DSL+RLK+WMEKNHAGM+AA+L++IG+++LYNG+HA+
Sbjct  181  ILAFVGAGDRLEDSLDRLKEWMEKNHAGMLAAVLILIGVMVLYNGIHAL  229


>gi|240170027|ref|ZP_04748686.1| hypothetical protein MkanA1_11991 [Mycobacterium kansasii ATCC 
12478]
Length=223

 Score =  293 bits (749),  Expect = 2e-77, Method: Compositional matrix adjust.
 Identities = 149/220 (68%), Positives = 177/220 (81%), Gaps = 0/220 (0%)

Query  10   HWVSVLTGLVPLALVIALSPLSVIPAVLVVHSPQPRPSSLAFLGGWLLGLAVVTAVFVAA  69
            +W +VL  LVPLALVIA+SPL+VIPAVLV+H+P+PRP+ LAFLGGWLLGLA VTA+F+A 
Sbjct  4    NWGAVLASLVPLALVIAVSPLTVIPAVLVLHAPRPRPTGLAFLGGWLLGLAAVTAIFIAG  63

Query  70   SGALGGLSTTSPAWASWLRVVLGSALIVFGVLRWLTRHRHTEMPGWMRAFASFTPARAGL  129
            SG LGGL  T PAWASWLRVVLGSALI+FG  RWLTRH H E P WMR+F++ TP RAG+
Sbjct  64   SGLLGGLHRTPPAWASWLRVVLGSALILFGGYRWLTRHGHAESPRWMRSFSTITPRRAGI  123

Query  130  VGAVLVVVRPEVLIICAAAGLAIGSGGHGAAGSWIYTAFFAMLAASTVAIPILAYVAAGD  189
              AVLVV+RPEVLIIC A GLAIG+   G AG WI  A F  LA STVA PI+ Y++A D
Sbjct  124  TAAVLVVLRPEVLIICLAGGLAIGTSALGVAGKWICAAVFVALAGSTVAFPIVGYLSAAD  183

Query  190  RLDDSLERLKDWMEKNHAGMVAAILVVIGLLLLYNGVHAM  229
            RLD+ L RLKDWM KNHA M+A +LV+IG ++LYNG+ A+
Sbjct  184  RLDEPLTRLKDWMAKNHAAMLAVVLVLIGAMVLYNGIRAL  223


>gi|342859195|ref|ZP_08715849.1| hypothetical protein MCOL_09963 [Mycobacterium colombiense CECT 
3035]
 gi|342133436|gb|EGT86639.1| hypothetical protein MCOL_09963 [Mycobacterium colombiense CECT 
3035]
Length=227

 Score =  265 bits (677),  Expect = 4e-69, Method: Compositional matrix adjust.
 Identities = 131/226 (58%), Positives = 166/226 (74%), Gaps = 0/226 (0%)

Query  4    LLPVAGHWVSVLTGLVPLALVIALSPLSVIPAVLVVHSPQPRPSSLAFLGGWLLGLAVVT  63
            +LPV   W SVL+ L+ LA VIALSP++VIPAVLV+H+P+PRP+SL+FLGGWLLGL  +T
Sbjct  1    MLPVDASWASVLSKLIALAAVIALSPITVIPAVLVLHAPRPRPASLSFLGGWLLGLVALT  60

Query  64   AVFVAASGALGGLSTTSPAWASWLRVVLGSALIVFGVLRWLTRHRHTEMPGWMRAFASFT  123
              FV+ S  L G   T P WA W+R+  G AL+      W TRHR   MP WMR+F++ +
Sbjct  61   TAFVSGSELLSGFHATPPKWAGWVRLAFGVALLALAAYHWFTRHRQRSMPRWMRSFSTLS  120

Query  124  PARAGLVGAVLVVVRPEVLIICAAAGLAIGSGGHGAAGSWIYTAFFAMLAASTVAIPILA  183
            P RAG++GAVLV +RPEVLI+CAAAGLA+G+   G     +  A F +LAASTVAIPILA
Sbjct  121  PGRAGVMGAVLVPLRPEVLILCAAAGLAVGNSSLGTGAQAVAVAIFVVLAASTVAIPILA  180

Query  184  YVAAGDRLDDSLERLKDWMEKNHAGMVAAILVVIGLLLLYNGVHAM  229
            YV AGDR DD+LERLK WM+ NH  M+A IL +IGL++LYNG+  +
Sbjct  181  YVGAGDRFDDALERLKAWMDANHDAMMAVILFLIGLIVLYNGIRTL  226


>gi|296167693|ref|ZP_06849939.1| conserved hypothetical protein [Mycobacterium parascrofulaceum 
ATCC BAA-614]
 gi|295897106|gb|EFG76719.1| conserved hypothetical protein [Mycobacterium parascrofulaceum 
ATCC BAA-614]
Length=223

 Score =  260 bits (665),  Expect = 8e-68, Method: Compositional matrix adjust.
 Identities = 144/223 (65%), Positives = 180/223 (81%), Gaps = 0/223 (0%)

Query  7    VAGHWVSVLTGLVPLALVIALSPLSVIPAVLVVHSPQPRPSSLAFLGGWLLGLAVVTAVF  66
            +AG W +VLTGLVPL LVI+LSPL+VIPAVLV+ +P+PRPS LAFLGGWLL LA +TA+ 
Sbjct  1    MAGSWGTVLTGLVPLGLVISLSPLTVIPAVLVLQAPRPRPSGLAFLGGWLLSLAALTALS  60

Query  67   VAASGALGGLSTTSPAWASWLRVVLGSALIVFGVLRWLTRHRHTEMPGWMRAFASFTPAR  126
            VAAS  LGGL  + P W+SWLRVV GSALIV+G+ +WL R  H E P WMR+FAS TPAR
Sbjct  61   VAASHLLGGLDKSPPRWSSWLRVVFGSALIVYGIYKWLNRRGHGESPKWMRSFASITPAR  120

Query  127  AGLVGAVLVVVRPEVLIICAAAGLAIGSGGHGAAGSWIYTAFFAMLAASTVAIPILAYVA  186
            AG++GAVL VVRP+V++IC  AGL IG+ G G  G W    FF +LAAS+VAIPILAY A
Sbjct  121  AGVMGAVLAVVRPDVVLICIPAGLGIGTAGLGLVGDWAAAGFFVVLAASSVAIPILAYAA  180

Query  187  AGDRLDDSLERLKDWMEKNHAGMVAAILVVIGLLLLYNGVHAM  229
            AG RLDD+L RLKDWM++N+A ++AA+LV+IG ++LY+G+ A+
Sbjct  181  AGSRLDDTLARLKDWMDRNNAALLAAVLVLIGAMVLYHGIDAL  223


>gi|254821950|ref|ZP_05226951.1| hypothetical protein MintA_18602 [Mycobacterium intracellulare 
ATCC 13950]
Length=224

 Score =  259 bits (661),  Expect = 3e-67, Method: Compositional matrix adjust.
 Identities = 135/219 (62%), Positives = 167/219 (77%), Gaps = 0/219 (0%)

Query  11   WVSVLTGLVPLALVIALSPLSVIPAVLVVHSPQPRPSSLAFLGGWLLGLAVVTAVFVAAS  70
            W SVL+ LV LA VIALSP++VIPAVLV+H+P+PRP+SLAFLGGWL+GL   TA FVA S
Sbjct  5    WASVLSKLVALAAVIALSPITVIPAVLVLHAPRPRPASLAFLGGWLVGLVAFTAAFVAGS  64

Query  71   GALGGLSTTSPAWASWLRVVLGSALIVFGVLRWLTRHRHTEMPGWMRAFASFTPARAGLV  130
             AL G   T P WASW+R+V G AL+      W TRHRH  MP WMR+F++ +PARAG+V
Sbjct  65   EALSGFHATPPKWASWVRLVFGVALLALAAFHWFTRHRHRSMPRWMRSFSTLSPARAGVV  124

Query  131  GAVLVVVRPEVLIICAAAGLAIGSGGHGAAGSWIYTAFFAMLAASTVAIPILAYVAAGDR  190
            GAVLV +RPEVLI+CAAAGLA+G+    A G  +  A F ++AASTVAIPILAY  +GDR
Sbjct  125  GAVLVPLRPEVLILCAAAGLAVGNSSLSAGGELVAAAIFVVVAASTVAIPILAYAGSGDR  184

Query  191  LDDSLERLKDWMEKNHAGMVAAILVVIGLLLLYNGVHAM  229
             + +LERLK WME NH  M+A IL +IGL++LYNG+ A+
Sbjct  185  FEGTLERLKAWMEANHDAMLAVILFLIGLIVLYNGIRAL  223


>gi|41409905|ref|NP_962741.1| hypothetical protein MAP3807 [Mycobacterium avium subsp. paratuberculosis 
K-10]
 gi|41398738|gb|AAS06357.1| hypothetical protein MAP_3807 [Mycobacterium avium subsp. paratuberculosis 
K-10]
Length=229

 Score =  253 bits (647),  Expect = 1e-65, Method: Compositional matrix adjust.
 Identities = 150/229 (66%), Positives = 186/229 (82%), Gaps = 0/229 (0%)

Query  1    MRGLLPVAGHWVSVLTGLVPLALVIALSPLSVIPAVLVVHSPQPRPSSLAFLGGWLLGLA  60
            M GL  +AG W +VLTGLVPL LVI+LSPL+VIPAVLV+ +P+PRPSSLAFLGGWLL LA
Sbjct  1    MAGLPLMAGSWGTVLTGLVPLGLVISLSPLTVIPAVLVLQAPRPRPSSLAFLGGWLLSLA  60

Query  61   VVTAVFVAASGALGGLSTTSPAWASWLRVVLGSALIVFGVLRWLTRHRHTEMPGWMRAFA  120
             +TA+ VAAS  LGGL  + P W+SWLRVVLG+ LI +G+ RW TRHRH+E P WMR+FA
Sbjct  61   ALTALAVAASHLLGGLDRSPPRWSSWLRVVLGAGLIGYGIFRWHTRHRHSESPAWMRSFA  120

Query  121  SFTPARAGLVGAVLVVVRPEVLIICAAAGLAIGSGGHGAAGSWIYTAFFAMLAASTVAIP  180
            S TPARAG+ GAVL VVRP+V +IC  AGLAIGS G G  G W+   FF  +AAS+VAIP
Sbjct  121  SITPARAGITGAVLAVVRPDVALICVPAGLAIGSSGLGPIGDWMAALFFVAVAASSVAIP  180

Query  181  ILAYVAAGDRLDDSLERLKDWMEKNHAGMVAAILVVIGLLLLYNGVHAM  229
            ILAY+AAG RLDD+L RL+DWM++N+A ++AA+LVVIG ++LY+G+ A+
Sbjct  181  ILAYLAAGSRLDDALARLRDWMDRNNAALLAAVLVVIGAMVLYHGIDAL  229


>gi|108797453|ref|YP_637650.1| hypothetical protein Mmcs_0473 [Mycobacterium sp. MCS]
 gi|119866538|ref|YP_936490.1| hypothetical protein Mkms_0484 [Mycobacterium sp. KMS]
 gi|126433072|ref|YP_001068763.1| hypothetical protein Mjls_0460 [Mycobacterium sp. JLS]
 gi|108767872|gb|ABG06594.1| conserved hypothetical protein [Mycobacterium sp. MCS]
 gi|119692627|gb|ABL89700.1| conserved hypothetical protein [Mycobacterium sp. KMS]
 gi|126232872|gb|ABN96272.1| conserved hypothetical protein [Mycobacterium sp. JLS]
Length=221

 Score =  253 bits (647),  Expect = 1e-65, Method: Compositional matrix adjust.
 Identities = 129/221 (59%), Positives = 165/221 (75%), Gaps = 2/221 (0%)

Query  9    GHWVSVLTGLVPLALVIALSPLSVIPAVLVVHSPQPRPSSLAFLGGWLLGLAVVTAVFVA  68
            G W +VLT L+PLALVIALSPLS+IPAVL++ +P+PRP++LAF+ GWL+GL  +TA+FVA
Sbjct  3    GSWGTVLTELIPLALVIALSPLSIIPAVLMLQTPRPRPTALAFMAGWLIGLGALTAIFVA  62

Query  69   ASGALGGLSTTSPAWASWLRVVLGSALIVFGVLRWLTRHRHTEMPGWMRAFASFTPARAG  128
             SGA+GG     P+WASWLR+V+G+ALIVFG++R+  RH  +  P W+R   +  P RA 
Sbjct  63   VSGAIGGFE-KPPSWASWLRIVIGAALIVFGLVRFARRHSSSHQPKWLRNLTTLGPGRAA  121

Query  129  LVGAVLVVVRPEVLIICAAAGLAIGSGGHGAAGSWIYTAFFAMLAASTVAIPILAYVAAG  188
               AVL V  P+VL IC AAGLAIGS G G A  W    +FA +A  +VA+PILAY  +G
Sbjct  122  GTAAVLTVANPKVLFICVAAGLAIGSAGLGNA-VWAAVVYFAAIAGCSVAVPILAYAVSG  180

Query  189  DRLDDSLERLKDWMEKNHAGMVAAILVVIGLLLLYNGVHAM  229
             RLDD L RLKDWME+NHA ++A ILVVIGLL+LY G+H +
Sbjct  181  GRLDDPLARLKDWMERNHATLMAVILVVIGLLVLYKGIHTL  221


>gi|254821951|ref|ZP_05226952.1| hypothetical protein MintA_18607 [Mycobacterium intracellulare 
ATCC 13950]
Length=223

 Score =  253 bits (646),  Expect = 1e-65, Method: Compositional matrix adjust.
 Identities = 148/223 (67%), Positives = 182/223 (82%), Gaps = 0/223 (0%)

Query  7    VAGHWVSVLTGLVPLALVIALSPLSVIPAVLVVHSPQPRPSSLAFLGGWLLGLAVVTAVF  66
            +AG W +VLTGLVPL LVI+LSPL+VIPAVLV+ +P+PRPSSLAFLGGWLL LA +TA+ 
Sbjct  1    MAGSWGTVLTGLVPLGLVISLSPLTVIPAVLVLQAPRPRPSSLAFLGGWLLSLAALTALA  60

Query  67   VAASGALGGLSTTSPAWASWLRVVLGSALIVFGVLRWLTRHRHTEMPGWMRAFASFTPAR  126
            VAASG LGGL    P W+SWLRVVLG+ LI FGV RWL R+  +E P WMR+FA+ TPAR
Sbjct  61   VAASGLLGGLDKAPPRWSSWLRVVLGAGLIAFGVYRWLRRNDQSESPAWMRSFANITPAR  120

Query  127  AGLVGAVLVVVRPEVLIICAAAGLAIGSGGHGAAGSWIYTAFFAMLAASTVAIPILAYVA  186
            AG+ GAVL +VRP+V +IC  AGL IG+ G G AG W   AFF  +AAS+VAIPILAYVA
Sbjct  121  AGITGAVLALVRPDVALICVPAGLGIGTSGLGVAGDWAAAAFFVAIAASSVAIPILAYVA  180

Query  187  AGDRLDDSLERLKDWMEKNHAGMVAAILVVIGLLLLYNGVHAM  229
            AG RLDD+L RLKDWM++N+A ++AA+LVVIG ++LY+G+HA+
Sbjct  181  AGSRLDDTLARLKDWMDRNNAALLAAVLVVIGAMVLYHGIHAL  223


>gi|118463847|ref|YP_883964.1| hypothetical protein MAV_4839 [Mycobacterium avium 104]
 gi|118165134|gb|ABK66031.1| conserved hypothetical protein [Mycobacterium avium 104]
Length=223

 Score =  253 bits (645),  Expect = 2e-65, Method: Compositional matrix adjust.
 Identities = 147/223 (66%), Positives = 183/223 (83%), Gaps = 0/223 (0%)

Query  7    VAGHWVSVLTGLVPLALVIALSPLSVIPAVLVVHSPQPRPSSLAFLGGWLLGLAVVTAVF  66
            +AG W +VLTGLVPL LVI+LSPL+VIPAVLV+ +P+PRPSSLAFLGGWLL LA +TA+ 
Sbjct  1    MAGSWGTVLTGLVPLGLVISLSPLTVIPAVLVLQAPRPRPSSLAFLGGWLLSLAALTALA  60

Query  67   VAASGALGGLSTTSPAWASWLRVVLGSALIVFGVLRWLTRHRHTEMPGWMRAFASFTPAR  126
            VAAS  LGGL  + P W+SWLRVVLG+ LI +G+ RW TRHRH+E P WMR+FAS TPAR
Sbjct  61   VAASHLLGGLDRSPPRWSSWLRVVLGAGLIGYGIFRWQTRHRHSESPAWMRSFASITPAR  120

Query  127  AGLVGAVLVVVRPEVLIICAAAGLAIGSGGHGAAGSWIYTAFFAMLAASTVAIPILAYVA  186
            AG+ GAVL VVRP+V +IC  AGLAIGS G G  G W+   FF  +AAS+VAIPILAY+A
Sbjct  121  AGITGAVLAVVRPDVALICVPAGLAIGSSGLGPIGDWMAALFFVAVAASSVAIPILAYLA  180

Query  187  AGDRLDDSLERLKDWMEKNHAGMVAAILVVIGLLLLYNGVHAM  229
            AG RLDD+L RL+DWM++N+A ++AA+LVVIG ++LY+G+ A+
Sbjct  181  AGSRLDDALARLRDWMDRNNAALLAAVLVVIGAMVLYHGIDAL  223


>gi|336460231|gb|EGO39134.1| Protein of unknown function (DUF2910) [Mycobacterium avium subsp. 
paratuberculosis S397]
Length=223

 Score =  252 bits (643),  Expect = 4e-65, Method: Compositional matrix adjust.
 Identities = 147/223 (66%), Positives = 183/223 (83%), Gaps = 0/223 (0%)

Query  7    VAGHWVSVLTGLVPLALVIALSPLSVIPAVLVVHSPQPRPSSLAFLGGWLLGLAVVTAVF  66
            +AG W +VLTGLVPL LVI+LSPL+VIPAVLV+ +P+PRPSSLAFLGGWLL LA +TA+ 
Sbjct  1    MAGSWGTVLTGLVPLGLVISLSPLTVIPAVLVLQAPRPRPSSLAFLGGWLLSLAALTALA  60

Query  67   VAASGALGGLSTTSPAWASWLRVVLGSALIVFGVLRWLTRHRHTEMPGWMRAFASFTPAR  126
            VAAS  LGGL  + P W+SWLRVVLG+ LI +G+ RW TRHRH+E P WMR+FAS TPAR
Sbjct  61   VAASHLLGGLDRSPPRWSSWLRVVLGTGLIGYGIFRWHTRHRHSESPAWMRSFASITPAR  120

Query  127  AGLVGAVLVVVRPEVLIICAAAGLAIGSGGHGAAGSWIYTAFFAMLAASTVAIPILAYVA  186
            AG+ GAVL VVRP+V +IC  AGLAIGS G G  G W+   FF  +AAS+VAIPILAY+A
Sbjct  121  AGITGAVLAVVRPDVALICVPAGLAIGSSGLGPIGDWMAALFFVAVAASSVAIPILAYLA  180

Query  187  AGDRLDDSLERLKDWMEKNHAGMVAAILVVIGLLLLYNGVHAM  229
            AG RLDD+L RL+DWM++N+A ++AA+LVVIG ++LY+G+ A+
Sbjct  181  AGSRLDDALARLRDWMDRNNAALLAAVLVVIGAMVLYHGIDAL  223


>gi|254777277|ref|ZP_05218793.1| hypothetical protein MaviaA2_21771 [Mycobacterium avium subsp. 
avium ATCC 25291]
Length=223

 Score =  251 bits (642),  Expect = 4e-65, Method: Compositional matrix adjust.
 Identities = 147/223 (66%), Positives = 183/223 (83%), Gaps = 0/223 (0%)

Query  7    VAGHWVSVLTGLVPLALVIALSPLSVIPAVLVVHSPQPRPSSLAFLGGWLLGLAVVTAVF  66
            +AG W +VLTGLVPL LVI+LSPL+VIPAVLV+ +P+PRPSSLAFLGGWLL LA +TA+ 
Sbjct  1    MAGSWGTVLTGLVPLGLVISLSPLTVIPAVLVLQAPRPRPSSLAFLGGWLLSLAALTALA  60

Query  67   VAASGALGGLSTTSPAWASWLRVVLGSALIVFGVLRWLTRHRHTEMPGWMRAFASFTPAR  126
            VAAS  LGGL  + P W+SWLRVVLG+ LI +G+ RW TRHRH+E P WMR+FAS TPAR
Sbjct  61   VAASHLLGGLDRSPPRWSSWLRVVLGAGLIGYGIFRWHTRHRHSESPAWMRSFASITPAR  120

Query  127  AGLVGAVLVVVRPEVLIICAAAGLAIGSGGHGAAGSWIYTAFFAMLAASTVAIPILAYVA  186
            AG+ GAVL VVRP+V +IC  AGLAIGS G G  G W+   FF  +AAS+VAIPILAY+A
Sbjct  121  AGITGAVLAVVRPDVALICVPAGLAIGSSGLGPIGDWMAALFFVAVAASSVAIPILAYLA  180

Query  187  AGDRLDDSLERLKDWMEKNHAGMVAAILVVIGLLLLYNGVHAM  229
            AG RLDD+L RL+DWM++N+A ++AA+LVVIG ++LY+G+ A+
Sbjct  181  AGSRLDDALARLRDWMDRNNAALLAAVLVVIGAMVLYHGIDAL  223


>gi|41409904|ref|NP_962740.1| hypothetical protein MAP3806 [Mycobacterium avium subsp. paratuberculosis 
K-10]
 gi|41398737|gb|AAS06356.1| hypothetical protein MAP_3806 [Mycobacterium avium subsp. paratuberculosis 
K-10]
Length=224

 Score =  251 bits (640),  Expect = 7e-65, Method: Compositional matrix adjust.
 Identities = 135/219 (62%), Positives = 166/219 (76%), Gaps = 0/219 (0%)

Query  11   WVSVLTGLVPLALVIALSPLSVIPAVLVVHSPQPRPSSLAFLGGWLLGLAVVTAVFVAAS  70
            W SVL+ LV LA VIALSP++VIPAVLV+H+P+PRP+SLAFLGGW+LGL  +TA FV  S
Sbjct  5    WASVLSKLVALAAVIALSPITVIPAVLVLHAPRPRPASLAFLGGWVLGLVGLTAAFVGGS  64

Query  71   GALGGLSTTSPAWASWLRVVLGSALIVFGVLRWLTRHRHTEMPGWMRAFASFTPARAGLV  130
              L GL  T P WASW+R+V G AL+      W TRHR   MP WMR+FA+ +P RAG+V
Sbjct  65   ELLSGLHATPPKWASWVRLVFGVALLALAAYHWFTRHRQRSMPRWMRSFATLSPVRAGVV  124

Query  131  GAVLVVVRPEVLIICAAAGLAIGSGGHGAAGSWIYTAFFAMLAASTVAIPILAYVAAGDR  190
            GAVLV +RPEVLI+CAAAGLA+G+    A    +  A F +LAASTVA+PILAY  AGDR
Sbjct  125  GAVLVPLRPEVLILCAAAGLAVGNSSLSAGAQLVAAAIFVVLAASTVAVPILAYAGAGDR  184

Query  191  LDDSLERLKDWMEKNHAGMVAAILVVIGLLLLYNGVHAM  229
             DD+LERLK WME NH  M+A IL++IGL++LYNG+ A+
Sbjct  185  FDDALERLKAWMEANHDAMLAVILLLIGLIVLYNGIRAL  223


>gi|296167692|ref|ZP_06849938.1| conserved hypothetical protein [Mycobacterium parascrofulaceum 
ATCC BAA-614]
 gi|295897105|gb|EFG76718.1| conserved hypothetical protein [Mycobacterium parascrofulaceum 
ATCC BAA-614]
Length=226

 Score =  249 bits (637),  Expect = 2e-64, Method: Compositional matrix adjust.
 Identities = 146/226 (65%), Positives = 177/226 (79%), Gaps = 0/226 (0%)

Query  4    LLPVAGHWVSVLTGLVPLALVIALSPLSVIPAVLVVHSPQPRPSSLAFLGGWLLGLAVVT  63
            +LPV   W SVLT LV LA VIALSP++VIPAVLV+H+P+PRP+SL+FL GW+LGLA +T
Sbjct  1    MLPVEASWGSVLTKLVALAAVIALSPITVIPAVLVLHAPRPRPTSLSFLAGWVLGLAALT  60

Query  64   AVFVAASGALGGLSTTSPAWASWLRVVLGSALIVFGVLRWLTRHRHTEMPGWMRAFASFT  123
            A F  AS  LG L T  P WASWLRVVLGSALI  G   WLTRHRH  MP WMR+F++ T
Sbjct  61   AAFAGASDLLGDLHTAPPTWASWLRVVLGSALIALGAYHWLTRHRHGAMPRWMRSFSTLT  120

Query  124  PARAGLVGAVLVVVRPEVLIICAAAGLAIGSGGHGAAGSWIYTAFFAMLAASTVAIPILA  183
            P RAG+  A LVV+RPEVL++CAAAGLA+G    GAAG  +  A F + AASTVA+PILA
Sbjct  121  PRRAGVTAAALVVLRPEVLLLCAAAGLAVGGSSLGAAGRLLAGAVFLVFAASTVALPILA  180

Query  184  YVAAGDRLDDSLERLKDWMEKNHAGMVAAILVVIGLLLLYNGVHAM  229
            Y  AGDRLDD+LER+K WME+NH  ++A ILV+IGL++LYNG+HA+
Sbjct  181  YAGAGDRLDDTLERVKVWMEENHGTLLAVILVLIGLMVLYNGIHAL  226


>gi|342859194|ref|ZP_08715848.1| hypothetical protein MCOL_09958 [Mycobacterium colombiense CECT 
3035]
 gi|342133435|gb|EGT86638.1| hypothetical protein MCOL_09958 [Mycobacterium colombiense CECT 
3035]
Length=223

 Score =  246 bits (628),  Expect = 2e-63, Method: Compositional matrix adjust.
 Identities = 141/223 (64%), Positives = 178/223 (80%), Gaps = 0/223 (0%)

Query  7    VAGHWVSVLTGLVPLALVIALSPLSVIPAVLVVHSPQPRPSSLAFLGGWLLGLAVVTAVF  66
            +AG W +VLTGLVPL LVI+LSPL+VIPAVLV+ +P+PRPS LAFL GW L LA +TA+ 
Sbjct  1    MAGSWGTVLTGLVPLGLVISLSPLTVIPAVLVLQAPRPRPSGLAFLAGWALTLAALTALS  60

Query  67   VAASGALGGLSTTSPAWASWLRVVLGSALIVFGVLRWLTRHRHTEMPGWMRAFASFTPAR  126
            VAAS  LGGL    P W+SWLRVVLGSALI +G+ +WL RH   E P WMR+FAS +PAR
Sbjct  61   VAASHLLGGLDKAPPRWSSWLRVVLGSALIGYGIYKWLKRHGQAESPAWMRSFASISPAR  120

Query  127  AGLVGAVLVVVRPEVLIICAAAGLAIGSGGHGAAGSWIYTAFFAMLAASTVAIPILAYVA  186
            AG++GAVL VVRP+V++IC  AGL IG+ G G  G W+  AFF  +AAS+VAIPILAY A
Sbjct  121  AGIMGAVLAVVRPDVVLICIPAGLGIGTAGLGLVGDWVAAAFFVAIAASSVAIPILAYAA  180

Query  187  AGDRLDDSLERLKDWMEKNHAGMVAAILVVIGLLLLYNGVHAM  229
            AG RLDD+L RLKDWM++N+A ++AA+LV+IG ++LY+G+ A+
Sbjct  181  AGSRLDDTLARLKDWMDRNNAALLAAVLVLIGAMVLYHGIQAL  223


>gi|336460232|gb|EGO39135.1| Protein of unknown function (DUF2910) [Mycobacterium avium subsp. 
paratuberculosis S397]
Length=217

 Score =  243 bits (621),  Expect = 1e-62, Method: Compositional matrix adjust.
 Identities = 131/216 (61%), Positives = 163/216 (76%), Gaps = 0/216 (0%)

Query  14   VLTGLVPLALVIALSPLSVIPAVLVVHSPQPRPSSLAFLGGWLLGLAVVTAVFVAASGAL  73
            +L+ LV LA VIALSP++VIPAVLV+H+P+PRP+SLAFLGGW+LGL  +TA FV  S  L
Sbjct  1    MLSKLVALAAVIALSPITVIPAVLVLHAPRPRPASLAFLGGWVLGLVGLTAAFVGGSELL  60

Query  74   GGLSTTSPAWASWLRVVLGSALIVFGVLRWLTRHRHTEMPGWMRAFASFTPARAGLVGAV  133
             GL  T P WASW+R+V G AL+      W TRHR   MP WMR+FA+ +P RAG+VGAV
Sbjct  61   SGLHATPPKWASWVRLVFGVALLALAAYHWFTRHRQRSMPRWMRSFATLSPVRAGVVGAV  120

Query  134  LVVVRPEVLIICAAAGLAIGSGGHGAAGSWIYTAFFAMLAASTVAIPILAYVAAGDRLDD  193
            LV +RPEVLI+CAAAGLA+G+    A    +  A F +LAASTV +PILAY  AGDR DD
Sbjct  121  LVPLRPEVLILCAAAGLAVGNSSLSAGAQLVAAAIFVVLAASTVVVPILAYAGAGDRFDD  180

Query  194  SLERLKDWMEKNHAGMVAAILVVIGLLLLYNGVHAM  229
            +LERLK WME NH  M+A IL++IGL++LYNG+ A+
Sbjct  181  ALERLKAWMEANHDAMLAVILLLIGLIVLYNGIRAL  216


>gi|118465551|ref|YP_883965.1| hypothetical protein MAV_4841 [Mycobacterium avium 104]
 gi|254777278|ref|ZP_05218794.1| hypothetical protein MaviaA2_21776 [Mycobacterium avium subsp. 
avium ATCC 25291]
 gi|118166838|gb|ABK67735.1| conserved hypothetical protein [Mycobacterium avium 104]
Length=217

 Score =  243 bits (620),  Expect = 2e-62, Method: Compositional matrix adjust.
 Identities = 131/216 (61%), Positives = 163/216 (76%), Gaps = 0/216 (0%)

Query  14   VLTGLVPLALVIALSPLSVIPAVLVVHSPQPRPSSLAFLGGWLLGLAVVTAVFVAASGAL  73
            +L+ LV LA VIALSP++VIPAVLV+H+P+PRP+SLAFLGGW+LGL  +T  FV  S  L
Sbjct  1    MLSKLVALAAVIALSPITVIPAVLVLHAPRPRPASLAFLGGWVLGLVGLTTAFVGGSELL  60

Query  74   GGLSTTSPAWASWLRVVLGSALIVFGVLRWLTRHRHTEMPGWMRAFASFTPARAGLVGAV  133
             GL  T P WASW+R+V G AL+      W TRHR   MP WMR+FA+ +P RAG+VGAV
Sbjct  61   SGLHATPPKWASWVRLVFGVALLALAAYHWFTRHRQRSMPRWMRSFAALSPVRAGVVGAV  120

Query  134  LVVVRPEVLIICAAAGLAIGSGGHGAAGSWIYTAFFAMLAASTVAIPILAYVAAGDRLDD  193
            LV +RPEVLI+CAAAGLA+G+    A    +  A F +LAASTVA+PIL YV AGDR DD
Sbjct  121  LVPLRPEVLILCAAAGLAVGNSSLSAGAQLVAAAIFVVLAASTVAVPILVYVGAGDRFDD  180

Query  194  SLERLKDWMEKNHAGMVAAILVVIGLLLLYNGVHAM  229
            +LERLK WME NH  M+A IL++IGL++LYNG+ A+
Sbjct  181  ALERLKAWMEANHDAMLAVILLLIGLIVLYNGIRAL  216


>gi|118472749|ref|YP_885135.1| hypothetical protein MSMEG_0729 [Mycobacterium smegmatis str. 
MC2 155]
 gi|118174036|gb|ABK74932.1| conserved hypothetical protein [Mycobacterium smegmatis str. 
MC2 155]
Length=222

 Score =  242 bits (618),  Expect = 3e-62, Method: Compositional matrix adjust.
 Identities = 129/223 (58%), Positives = 165/223 (74%), Gaps = 1/223 (0%)

Query  7    VAGHWVSVLTGLVPLALVIALSPLSVIPAVLVVHSPQPRPSSLAFLGGWLLGLAVVTAVF  66
            + G W SVLT L+PLA+V+ALSPLS+IPAVLV+ +P+PRP+ LAFLGGWL+G+A +TA+F
Sbjct  1    MTGIWSSVLTELIPLAMVVALSPLSIIPAVLVLQTPRPRPTGLAFLGGWLVGMAALTALF  60

Query  67   VAASGALGGLSTTSPAWASWLRVVLGSALIVFGVLRWLTRHRHTEMPGWMRAFASFTPAR  126
            +  S   G L    P WASWLR+VLG+ALI+FGV RWL R +    P WM++    TP R
Sbjct  61   IEVSNLFGRLDK-PPVWASWLRIVLGTALIIFGVYRWLNRSKAAHTPKWMQSMGKLTPPR  119

Query  127  AGLVGAVLVVVRPEVLIICAAAGLAIGSGGHGAAGSWIYTAFFAMLAASTVAIPILAYVA  186
            AG+ G VL +V P+VL ICAAAGLAIGS G G    W    +F + A+STVA+PILAY  
Sbjct  120  AGVTGVVLTIVNPKVLFICAAAGLAIGSAGLGQPQVWAAAIWFVVFASSTVALPILAYAV  179

Query  187  AGDRLDDSLERLKDWMEKNHAGMVAAILVVIGLLLLYNGVHAM  229
            +G +LD +L RL +WME+ HA +VA ILVVIGLL+LY G+HA+
Sbjct  180  SGSKLDPTLARLGEWMERQHAVLVAVILVVIGLLVLYKGLHAL  222


>gi|120401658|ref|YP_951487.1| hypothetical protein Mvan_0642 [Mycobacterium vanbaalenii PYR-1]
 gi|119954476|gb|ABM11481.1| conserved hypothetical protein [Mycobacterium vanbaalenii PYR-1]
Length=225

 Score =  241 bits (615),  Expect = 6e-62, Method: Compositional matrix adjust.
 Identities = 128/221 (58%), Positives = 163/221 (74%), Gaps = 0/221 (0%)

Query  9    GHWVSVLTGLVPLALVIALSPLSVIPAVLVVHSPQPRPSSLAFLGGWLLGLAVVTAVFVA  68
            G W  +LT L+PLALVIALSPLS+IPAVLV+HSP+PRP+ LAFL GWL+GLA +TA+F+ 
Sbjct  3    GSWGPILTELIPLALVIALSPLSIIPAVLVLHSPRPRPTGLAFLVGWLVGLAALTAIFLQ  62

Query  69   ASGALGGLSTTSPAWASWLRVVLGSALIVFGVLRWLTRHRHTEMPGWMRAFASFTPARAG  128
             S  +GG+ T  P+WASWLR+V+G  LI FG  RW+TR +   MPGWM   ++ TPA+AG
Sbjct  63   LSDLVGGIGTQPPSWASWLRIVVGVGLIGFGGYRWVTRKKSEHMPGWMTRMSTLTPAKAG  122

Query  129  LVGAVLVVVRPEVLIICAAAGLAIGSGGHGAAGSWIYTAFFAMLAASTVAIPILAYVAAG  188
               A L V+ P+VL ICAAAGLAIGS G  +   W    +F  +A  TVA+P+L Y  +G
Sbjct  123  ATAAALTVLNPKVLFICAAAGLAIGSAGLDSPTVWGAMIWFVAIAGLTVALPVLGYAVSG  182

Query  189  DRLDDSLERLKDWMEKNHAGMVAAILVVIGLLLLYNGVHAM  229
            +RLD +L RLK WME+ HA +VAAILV IGLL+LY G+HA+
Sbjct  183  ERLDPTLNRLKAWMERQHAVLVAAILVAIGLLVLYKGIHAL  223


>gi|333988984|ref|YP_004521598.1| hypothetical protein JDM601_0344 [Mycobacterium sp. JDM601]
 gi|333484952|gb|AEF34344.1| integral membrane protein [Mycobacterium sp. JDM601]
Length=223

 Score =  238 bits (608),  Expect = 4e-61, Method: Compositional matrix adjust.
 Identities = 136/217 (63%), Positives = 168/217 (78%), Gaps = 0/217 (0%)

Query  13   SVLTGLVPLALVIALSPLSVIPAVLVVHSPQPRPSSLAFLGGWLLGLAVVTAVFVAASGA  72
            S+LT L+PLALV+ALSP++VIPAVLV+H+ +PR + L+FL GWL GLA +TA FVAASG 
Sbjct  7    SLLTTLIPLALVVALSPITVIPAVLVLHTARPRETGLSFLTGWLAGLAALTAAFVAASGL  66

Query  73   LGGLSTTSPAWASWLRVVLGSALIVFGVLRWLTRHRHTEMPGWMRAFASFTPARAGLVGA  132
            LGGL++T P WASWLR+V+G ALI FG  RW TRHRH EMPGWMR+F S T  RAGL   
Sbjct  67   LGGLNSTPPTWASWLRIVVGVALIAFGGYRWATRHRHGEMPGWMRSFTSMTAPRAGLTAV  126

Query  133  VLVVVRPEVLIICAAAGLAIGSGGHGAAGSWIYTAFFAMLAASTVAIPILAYVAAGDRLD  192
             L V+RPEVL +CAAAGLAIGS G  A G+W   A F  +AASTV +PI+ Y+AA DR D
Sbjct  127  ALAVIRPEVLFMCAAAGLAIGSAGLTAMGNWQAAALFVAVAASTVVVPIVGYLAASDRFD  186

Query  193  DSLERLKDWMEKNHAGMVAAILVVIGLLLLYNGVHAM  229
             +L RLKDWME+ HA ++A ILV+IG ++ YNG+H +
Sbjct  187  PALNRLKDWMEQQHAALLAVILVLIGAMVTYNGIHVL  223


>gi|145220856|ref|YP_001131534.1| hypothetical protein Mflv_0252 [Mycobacterium gilvum PYR-GCK]
 gi|315442189|ref|YP_004075068.1| hypothetical protein Mspyr1_05240 [Mycobacterium sp. Spyr1]
 gi|145213342|gb|ABP42746.1| conserved hypothetical protein [Mycobacterium gilvum PYR-GCK]
 gi|315260492|gb|ADT97233.1| hypothetical protein Mspyr1_05240 [Mycobacterium sp. Spyr1]
Length=225

 Score =  221 bits (564),  Expect = 6e-56, Method: Compositional matrix adjust.
 Identities = 124/221 (57%), Positives = 161/221 (73%), Gaps = 0/221 (0%)

Query  9    GHWVSVLTGLVPLALVIALSPLSVIPAVLVVHSPQPRPSSLAFLGGWLLGLAVVTAVFVA  68
            G W S+L  L+PLALVIALSPLS+IPAVLV+ + +PRP+ LAFL GW+LGLA +TAVF+ 
Sbjct  3    GTWGSILIELIPLALVIALSPLSIIPAVLVLSAARPRPTGLAFLAGWVLGLAALTAVFLQ  62

Query  69   ASGALGGLSTTSPAWASWLRVVLGSALIVFGVLRWLTRHRHTEMPGWMRAFASFTPARAG  128
             S  +GG+ T  P+WASWLR+V+G  LI++G  RWL R     MPGWM   ++ TPA+A 
Sbjct  63   LSDLVGGIGTKPPSWASWLRIVVGVLLILWGAYRWLKRASSEHMPGWMTRISALTPAKAA  122

Query  129  LVGAVLVVVRPEVLIICAAAGLAIGSGGHGAAGSWIYTAFFAMLAASTVAIPILAYVAAG  188
               A L V+  +VL ICAAAGLAIGS G      W    +F ++AASTVA PI+AY  +G
Sbjct  123  ATAAALTVLNVKVLFICAAAGLAIGSSGLDTPTVWAAVLWFVLVAASTVAAPIVAYAISG  182

Query  189  DRLDDSLERLKDWMEKNHAGMVAAILVVIGLLLLYNGVHAM  229
            +RLD +L R++ WME+ HA ++AAILVVIGLL+LY G+HA+
Sbjct  183  ERLDPTLNRVQAWMERQHATLIAAILVVIGLLVLYKGIHAL  223


>gi|226309132|ref|YP_002769092.1| hypothetical protein RER_56450 [Rhodococcus erythropolis PR4]
 gi|226188249|dbj|BAH36353.1| conserved hypothetical membrane protein [Rhodococcus erythropolis 
PR4]
Length=219

 Score =  140 bits (353),  Expect = 2e-31, Method: Compositional matrix adjust.
 Identities = 78/217 (36%), Positives = 132/217 (61%), Gaps = 0/217 (0%)

Query  13   SVLTGLVPLALVIALSPLSVIPAVLVVHSPQPRPSSLAFLGGWLLGLAVVTAVFVAASGA  72
            SV+  L+PLA+ +A+SP+ +I A+L++ S +   +S+ F  GW+LG+ V T +FV  S  
Sbjct  3    SVIGDLLPLAVGVAVSPIPIIAAILMLLSKRAGSTSVGFALGWILGIVVATVIFVLLSSK  62

Query  73   LGGLSTTSPAWASWLRVVLGSALIVFGVLRWLTRHRHTEMPGWMRAFASFTPARAGLVGA  132
            LG       A  SW+++ LG  L+ FGV +W  R    E P WM+A    T A+   +G 
Sbjct  63   LGDSEGDPSATVSWIKLALGVLLLAFGVKQWRGRGGEHETPKWMQAIDDMTAAKGLGLGF  122

Query  133  VLVVVRPEVLIICAAAGLAIGSGGHGAAGSWIYTAFFAMLAASTVAIPILAYVAAGDRLD  192
             L  + P+ L++C AAG++IGS   G+    +    F ++AASTV +P++ Y+ A +RL 
Sbjct  123  ALAAINPKNLMMCIAAGISIGSASLGSGEVVVAVLVFTVIAASTVCVPVIGYLVAAERLR  182

Query  193  DSLERLKDWMEKNHAGMVAAILVVIGLLLLYNGVHAM  229
              L +LK W++ N+A +++ +++VIG++L+  G+  +
Sbjct  183  GPLAKLKVWLQDNNATVMSVLILVIGVVLIGKGIGGL  219


>gi|229491566|ref|ZP_04385387.1| putative membrane protein [Rhodococcus erythropolis SK121]
 gi|229321247|gb|EEN87047.1| putative membrane protein [Rhodococcus erythropolis SK121]
Length=219

 Score =  140 bits (352),  Expect = 2e-31, Method: Compositional matrix adjust.
 Identities = 76/217 (36%), Positives = 129/217 (60%), Gaps = 0/217 (0%)

Query  13   SVLTGLVPLALVIALSPLSVIPAVLVVHSPQPRPSSLAFLGGWLLGLAVVTAVFVAASGA  72
            SV+  L+PLA+ +A+SP+ +I A+L++ S +   +S+ F  GW+LG+ V T +FV  S  
Sbjct  3    SVIGDLLPLAVGVAVSPIPIIAAILMLLSKRAGSTSVGFALGWILGIVVATVIFVLLSSK  62

Query  73   LGGLSTTSPAWASWLRVVLGSALIVFGVLRWLTRHRHTEMPGWMRAFASFTPARAGLVGA  132
            LG       A  SW+++ LG  L+ FGV +W  R    E P WM A    T  +   +G 
Sbjct  63   LGDSEGDPSATVSWIKLALGVLLLAFGVKQWRGRGGEHETPKWMHAIDDMTAVKGLGLGF  122

Query  133  VLVVVRPEVLIICAAAGLAIGSGGHGAAGSWIYTAFFAMLAASTVAIPILAYVAAGDRLD  192
             L  + P+ L++C AAG++IGS   G+    +    F ++AA TV +P++ Y+ A +RL 
Sbjct  123  ALAAINPKNLMMCIAAGISIGSASLGSGEVVVAILVFTIIAACTVCVPVIGYLVAAERLR  182

Query  193  DSLERLKDWMEKNHAGMVAAILVVIGLLLLYNGVHAM  229
              L +LK W++ N+A +++ +++VIG++L+  G+  +
Sbjct  183  GPLAKLKVWLQDNNATVMSVLILVIGVVLIGKGIGGL  219


>gi|258652796|ref|YP_003201952.1| hypothetical protein Namu_2611 [Nakamurella multipartita DSM 
44233]
 gi|258556021|gb|ACV78963.1| hypothetical protein Namu_2611 [Nakamurella multipartita DSM 
44233]
Length=223

 Score =  133 bits (335),  Expect = 2e-29, Method: Compositional matrix adjust.
 Identities = 87/219 (40%), Positives = 136/219 (63%), Gaps = 5/219 (2%)

Query  13   SVLTGLVPLALVIALSPLSVIPAVLVVHSPQPRPSSLAFLGGWLLGLAVVTAVFVAASGA  72
            +V+   +PLA+ IALSPL +I A+L++ SP+   +   FL GW++G+ VVT V +  SG+
Sbjct  3    AVIGQTLPLAVGIALSPLPIIAAILMLLSPRAATNGSGFLLGWIIGVVVVTVVMIGLSGS  62

Query  73   L--GGLSTTSPAWASWLRVVLGSALIVFGVLRWLTRHRHTEMPGWMRAFASFTPARAGLV  130
            L  GG     PAWASW ++VLG  L++ G  RW  R    + P WM+A  +FT  R+ +V
Sbjct  63   LHTGG---PPPAWASWTKIVLGILLVLRGAGRWRRRGEQRDTPKWMKAIDNFTFGRSLVV  119

Query  131  GAVLVVVRPEVLIICAAAGLAIGSGGHGAAGSWIYTAFFAMLAASTVAIPILAYVAAGDR  190
            G +L  V P+ LI+  AAGLAIG+ G       +    F  +A+ TVAIP++ Y+ AG R
Sbjct  120  GMLLSAVNPKNLILAVAAGLAIGTAGLAIGAEVVVLIVFTAIASLTVAIPVIGYLVAGQR  179

Query  191  LDDSLERLKDWMEKNHAGMVAAILVVIGLLLLYNGVHAM  229
            +   L+R K W++ N+AGM+A +++++  +L+  G+  +
Sbjct  180  MRPWLDRAKVWLQANNAGMMAVLILILSAVLIGKGIEGL  218


>gi|226306156|ref|YP_002766116.1| hypothetical protein RER_26690 [Rhodococcus erythropolis PR4]
 gi|226185273|dbj|BAH33377.1| conserved hypothetical membrane protein [Rhodococcus erythropolis 
PR4]
Length=220

 Score =  132 bits (331),  Expect = 5e-29, Method: Compositional matrix adjust.
 Identities = 71/194 (37%), Positives = 115/194 (60%), Gaps = 0/194 (0%)

Query  13   SVLTGLVPLALVIALSPLSVIPAVLVVHSPQPRPSSLAFLGGWLLGLAVVTAVFVAASGA  72
            SV+  L+P+A+ +A+SP++VI  +L++ S +   +S+ F  GWLLG+ + T +FV  S A
Sbjct  3    SVIGDLLPIAVGVAVSPVAVIATILMLLSKRAGSTSIGFALGWLLGIFIATVLFVTLSSA  62

Query  73   LGGLSTTSPAWASWLRVVLGSALIVFGVLRWLTRHRHTEMPGWMRAFASFTPARAGLVGA  132
            L        A  SW+++ LG  L+ FGV +W  R    E P WM+A    T  +   +G 
Sbjct  63   LSTSDNGPSATVSWIKLALGVLLLAFGVKQWRGRSGEHETPKWMQAIDEMTAVKGLGLGF  122

Query  133  VLVVVRPEVLIICAAAGLAIGSGGHGAAGSWIYTAFFAMLAASTVAIPILAYVAAGDRLD  192
             L  + P+ L++C AAG++IGS     +G       F ++A+STVAIP++ Y+ + DRL 
Sbjct  123  ALAAINPKNLLMCIAAGVSIGSASLATSGVIASVLVFTIIASSTVAIPVIGYLVSADRLR  182

Query  193  DSLERLKDWMEKNH  206
            + L +LK W++ N+
Sbjct  183  EPLAKLKVWLQDNN  196


>gi|111021272|ref|YP_704244.1| hypothetical protein RHA1_ro04295 [Rhodococcus jostii RHA1]
 gi|110820802|gb|ABG96086.1| conserved hypothetical protein [Rhodococcus jostii RHA1]
Length=262

 Score =  117 bits (293),  Expect = 1e-24, Method: Compositional matrix adjust.
 Identities = 71/214 (34%), Positives = 130/214 (61%), Gaps = 1/214 (0%)

Query  13   SVLTGLVPLALVIALSPLSVIPAVLVVHSPQPRPSSLAFLGGWLLGLAVVTAVFVAASGA  72
            SV+  L+PLA+ +A+SP+ +I  +L++ S +   +S  F  GW+LG+ V T +F+  +G+
Sbjct  44   SVIGELLPLAVGVAISPIPIIAVILMLLSKRAGGASAGFGVGWILGILVATGIFMLLAGS  103

Query  73   LGGLSTTSP-AWASWLRVVLGSALIVFGVLRWLTRHRHTEMPGWMRAFASFTPARAGLVG  131
            +    +  P A ASW++VVLG  L++    +W +R+ H E P WM+A       ++  +G
Sbjct  104  IDTSGSDGPSATASWVKVVLGVLLLLLAGRQWRSRNAHAEPPKWMQAIDDLNFVKSTGLG  163

Query  132  AVLVVVRPEVLIICAAAGLAIGSGGHGAAGSWIYTAFFAMLAASTVAIPILAYVAAGDRL  191
              L  + P+ L++C +AG+ IG+ G       +    + +LA STV +P++AY  A D++
Sbjct  164  FALAAINPKNLLLCVSAGVGIGTAGVSGGEQVVALIVYTVLAGSTVLVPVIAYAVAADKM  223

Query  192  DDSLERLKDWMEKNHAGMVAAILVVIGLLLLYNG  225
              +L+ LK W++ N+A +++ +L+V+G ++L  G
Sbjct  224  RGTLDNLKVWLQSNNAAVMSVLLLVMGAVVLGKG  257


>gi|229490836|ref|ZP_04384671.1| putative membrane protein [Rhodococcus erythropolis SK121]
 gi|229322226|gb|EEN88012.1| putative membrane protein [Rhodococcus erythropolis SK121]
Length=220

 Score =  113 bits (282),  Expect = 3e-23, Method: Compositional matrix adjust.
 Identities = 72/194 (38%), Positives = 112/194 (58%), Gaps = 0/194 (0%)

Query  13   SVLTGLVPLALVIALSPLSVIPAVLVVHSPQPRPSSLAFLGGWLLGLAVVTAVFVAASGA  72
            SV+  L+PLA+ +A+SP++VI  +L++ S +   +S  F  GWLLG+ + T +FV  S A
Sbjct  3    SVVGELLPLAVGVAVSPVAVIATILMLLSKRAGSTSAGFAVGWLLGIFIATVLFVILSSA  62

Query  73   LGGLSTTSPAWASWLRVVLGSALIVFGVLRWLTRHRHTEMPGWMRAFASFTPARAGLVGA  132
            +        A  SW+++ LG  L+  GV +W  R    E P WM+A    T A+   +G 
Sbjct  63   VSTSDDGPSATVSWIKLALGVLLLAVGVKQWRGRSGEHETPKWMQAVDEMTAAKGLGLGF  122

Query  133  VLVVVRPEVLIICAAAGLAIGSGGHGAAGSWIYTAFFAMLAASTVAIPILAYVAAGDRLD  192
             L  +  + L++C AAG++IGS     +G+      F ++A+STVAIP++ Y+ A DRL 
Sbjct  123  ALAAINLKNLLMCIAAGVSIGSASLATSGAITSILVFTVIASSTVAIPVIGYLVAADRLR  182

Query  193  DSLERLKDWMEKNH  206
              L  LK W+E N+
Sbjct  183  KPLANLKVWLEDNN  196


>gi|296167302|ref|ZP_06849704.1| hypothetical protein HMPREF0591_3145 [Mycobacterium parascrofulaceum 
ATCC BAA-614]
 gi|295897246|gb|EFG76850.1| hypothetical protein HMPREF0591_3145 [Mycobacterium parascrofulaceum 
ATCC BAA-614]
Length=216

 Score =  111 bits (277),  Expect = 9e-23, Method: Compositional matrix adjust.
 Identities = 74/213 (35%), Positives = 120/213 (57%), Gaps = 1/213 (0%)

Query  14   VLTGLVPLALVIALSPLSVIPA-VLVVHSPQPRPSSLAFLGGWLLGLAVVTAVFVAASGA  72
            VL  L   ALV+A+SP+ ++ + VL++H+ +P  SS+A+L G L+ L V+T  F+ A   
Sbjct  2    VLAKLSAPALVVAVSPVPIVVSLVLLIHNDRPYSSSVAYLLGRLVSLTVLTTAFMRAPRL  61

Query  73   LGGLSTTSPAWASWLRVVLGSALIVFGVLRWLTRHRHTEMPGWMRAFASFTPARAGLVGA  132
               L   +P W  W+ + +G+AL+ FG   W  R   T  PGW     + TPA A  +G 
Sbjct  62   FDDLVGPAPPWGDWVVIGVGAALVAFGAWLWWRRAHGTGRPGWDGGVGTITPAAAAAIGM  121

Query  133  VLVVVRPEVLIICAAAGLAIGSGGHGAAGSWIYTAFFAMLAASTVAIPILAYVAAGDRLD  192
            + ++  P+VL   AA G  I +    A  + +  A++A+LA STVA P++AY   G R+D
Sbjct  122  LPMLANPKVLAATAAVGTQIATSRLTALSAVVAVAYYAVLATSTVAAPVVAYFVVGPRID  181

Query  193  DSLERLKDWMEKNHAGMVAAILVVIGLLLLYNG  225
              LER++ W++  H  + A  + ++G  ++  G
Sbjct  182  PHLERIRCWIQDRHRALAAITVALVGFAVVLYG  214


>gi|326384789|ref|ZP_08206465.1| hypothetical protein SCNU_17692 [Gordonia neofelifaecis NRRL 
B-59395]
 gi|326196451|gb|EGD53649.1| hypothetical protein SCNU_17692 [Gordonia neofelifaecis NRRL 
B-59395]
Length=216

 Score =  110 bits (275),  Expect = 1e-22, Method: Compositional matrix adjust.
 Identities = 78/215 (37%), Positives = 125/215 (59%), Gaps = 6/215 (2%)

Query  13   SVLTGLVPLALVIALSPLSVIPAVLVVHSPQPRPSSLAFLGGWLLGLAVVTAVFVAASGA  72
            +V+  L+P+A+ +A+SP+ +I A+L++     R +SL F  GW++G+   TA+F     A
Sbjct  3    AVIGDLLPMAVGVAISPIPIIAAILMLLGKHARTTSLGFAAGWIIGVVAATAIFTTVGSA  62

Query  73   LGGLSTTSPAWASWLRVVLGSALIVFGVLRWLTRHRHTEMPGWMRAFASFT-PARAGLVG  131
              G ST       W+++VLG  L+  GV  W  R      P WM+A      PA AG +G
Sbjct  63   ASGSSTA----VGWVKLVLGVLLLAEGVREWRARSGPASTPKWMKAIDEMKAPAGAG-IG  117

Query  132  AVLVVVRPEVLIICAAAGLAIGSGGHGAAGSWIYTAFFAMLAASTVAIPILAYVAAGDRL  191
             VL  V P+ L++C AAG+ IG+         +    F+++A+STV +P+LAY  A DRL
Sbjct  118  FVLAAVNPKNLMLCIAAGMQIGAASLSTGDDIVAIVVFSLIASSTVVVPVLAYQVAADRL  177

Query  192  DDSLERLKDWMEKNHAGMVAAILVVIGLLLLYNGV  226
               L+ LK W+E N+  ++A +++VIG++L+  G+
Sbjct  178  RGPLDSLKAWLEANNKTVMAVLILVIGVVLIGKGI  212


>gi|326780062|ref|ZP_08239327.1| Protein of unknown function DUF2910 [Streptomyces cf. griseus 
XylebKG-1]
 gi|326660395|gb|EGE45241.1| Protein of unknown function DUF2910 [Streptomyces griseus XylebKG-1]
Length=225

 Score =  107 bits (268),  Expect = 9e-22, Method: Compositional matrix adjust.
 Identities = 66/201 (33%), Positives = 106/201 (53%), Gaps = 4/201 (1%)

Query  22   ALVIALSPLSVIPAVLVVHSPQPRPSSLAFLGGWLLGLAVVTAVFVAASGALGGLSTTSP  81
            A+ IA+SPL +I  VL++ +P+ R +  AF  GW+L L  +TAV V A    G     +P
Sbjct  12   AVGIAISPLPLIAVVLMLATPRGRVNGTAFTLGWMLTLGAITAVVVGAGSGAGADDAGTP  71

Query  82   A-WASWLRVVLGSALIVFGVLRWLTRHRHTE---MPGWMRAFASFTPARAGLVGAVLVVV  137
            A W  WL++ LG   ++ G  +W  R R  +   +PGWMRA   FTP +A  + A+L   
Sbjct  72   ADWTYWLKLALGVLFLLMGAKQWKDRPREGQEHTLPGWMRAIDRFTPGKAAGLAALLSGA  131

Query  138  RPEVLIICAAAGLAIGSGGHGAAGSWIYTAFFAMLAASTVAIPILAYVAAGDRLDDSLER  197
             P+ L++      +I S      G  +    F ++ ++ V +P+L YV  G R    L  
Sbjct  132  NPKNLVLAVGGAASIASSPANVGGKAVAGVLFVLIGSACVLLPLLVYVFGGSRSAAVLGG  191

Query  198  LKDWMEKNHAGMVAAILVVIG  218
             K WM ++++ ++  +L V+G
Sbjct  192  WKTWMGEHNSAIMTVVLTVLG  212


>gi|312139219|ref|YP_004006555.1| integral membrane protein [Rhodococcus equi 103S]
 gi|311888558|emb|CBH47870.1| putative integral membrane protein [Rhodococcus equi 103S]
Length=223

 Score =  103 bits (256),  Expect = 3e-20, Method: Compositional matrix adjust.
 Identities = 74/214 (35%), Positives = 122/214 (58%), Gaps = 6/214 (2%)

Query  18   LVPLALVIALSPLSVIPAVLVVHSPQPRPSSLAFLGGWLLGLAVVTAVFVAASGALGGLS  77
            ++PLA+ +A+SP+ +I  +L++ +P+   ++ AFL GW+LG+AV   VFVA   A+  LS
Sbjct  8    VLPLAIGVAISPIPIIATILMLLTPRAGSTATAFLAGWILGIAVGYVVFVAIGSAID-LS  66

Query  78   TTSPAWA--SWLRVVLGSALIVFGVLRWLTR---HRHTEMPGWMRAFASFTPARAGLVGA  132
            + S   A  + +R+VLG  L+   V +W TR        MP W+ A    TP +A  +G 
Sbjct  67   SNSDGNAVTATIRLVLGVLLLALAVKQWRTRPAPGEEPSMPAWLAAIDKVTPGKALALGV  126

Query  133  VLVVVRPEVLIICAAAGLAIGSGGHGAAGSWIYTAFFAMLAASTVAIPILAYVAAGDRLD  192
             L  + P+ L++   A +A+     G     +    F +LAASTVA+P++ Y    +R  
Sbjct  127  GLSAINPKNLLMIVGAAVAVSQLDVGVGAKTVTGVVFTILAASTVAVPVVGYFTMRERAT  186

Query  193  DSLERLKDWMEKNHAGMVAAILVVIGLLLLYNGV  226
              L+ LK W+  N+A ++A +L+VIG+ L+  G+
Sbjct  187  SWLQGLKVWLTANNAAVMAVLLLVIGVSLIGKGI  220


>gi|325673475|ref|ZP_08153166.1| hypothetical protein HMPREF0724_10948 [Rhodococcus equi ATCC 
33707]
 gi|325555496|gb|EGD25167.1| hypothetical protein HMPREF0724_10948 [Rhodococcus equi ATCC 
33707]
Length=223

 Score =  103 bits (256),  Expect = 3e-20, Method: Compositional matrix adjust.
 Identities = 75/214 (36%), Positives = 123/214 (58%), Gaps = 6/214 (2%)

Query  18   LVPLALVIALSPLSVIPAVLVVHSPQPRPSSLAFLGGWLLGLAVVTAVFVAASGALGGLS  77
            ++PLA+ +A+SP+ +I  +L++ +P+   ++ AFL GW+LG+AV   VFVA   A+  LS
Sbjct  8    VLPLAIGVAISPIPIIATILMLLTPRAGSTATAFLAGWILGIAVGYVVFVAIGSAID-LS  66

Query  78   TTSPAWA--SWLRVVLGSALIVFGVLRWLTRHRHTE---MPGWMRAFASFTPARAGLVGA  132
            + S   A  + +R+VLG  L+   V +W TR    E   MP W+ A    TP +A  +G 
Sbjct  67   SNSDGNAVTATIRLVLGVLLLALAVKQWRTRPAPGEDPSMPAWLAAIDKVTPGKALALGV  126

Query  133  VLVVVRPEVLIICAAAGLAIGSGGHGAAGSWIYTAFFAMLAASTVAIPILAYVAAGDRLD  192
             L  + P+ L++   A +A+     G     +    F +LAASTVA+P++ Y    +R  
Sbjct  127  GLSAINPKNLLMIVGAAVAVSQLDVGVGAKTVTGVVFTILAASTVAVPVVGYFTMRERAT  186

Query  193  DSLERLKDWMEKNHAGMVAAILVVIGLLLLYNGV  226
              L+ LK W+  N+A ++A +L+VIG+ L+  G+
Sbjct  187  SWLQGLKVWLTANNAAVMAVLLLVIGVSLIGKGI  220


>gi|336116079|ref|YP_004570845.1| hypothetical protein MLP_04280 [Microlunatus phosphovorus NM-1]
 gi|334683857|dbj|BAK33442.1| hypothetical protein MLP_04280 [Microlunatus phosphovorus NM-1]
Length=223

 Score =  101 bits (251),  Expect = 9e-20, Method: Compositional matrix adjust.
 Identities = 73/218 (34%), Positives = 132/218 (61%), Gaps = 4/218 (1%)

Query  13   SVLTGLVPLALVIALSPLSVIPAVLVVHSPQPRPSSLAFLGGWLLGLAVVTAVFVAASGA  72
             V+  ++PLAL I +SP+ +I A+L++ SP+ + +S+ FL GW+LG+ +V AVF+  +  
Sbjct  3    EVIGDILPLALGITISPIPIIAAILLLLSPKAKGTSVGFLVGWILGILIVLAVFILLASV  62

Query  73   LGGLSTTSPAWASW-LRVVLGSALIVFGVLRWLTRHR---HTEMPGWMRAFASFTPARAG  128
            +       P   S  ++++LG+ ++V  + +W  R R      MP WM A    T A+  
Sbjct  63   ITPADPDQPQPISGAIKLLLGALMLVLAIKQWRGRPRDGAEPSMPAWMSAIDQLTAAKGL  122

Query  129  LVGAVLVVVRPEVLIICAAAGLAIGSGGHGAAGSWIYTAFFAMLAASTVAIPILAYVAAG  188
             +G +L  V P+ L++ A+AG+ IGS G     + +  A F  +AA++VA+P++ Y+AA 
Sbjct  123  GLGLLLSAVNPKNLLMGASAGVTIGSAGLPFGSTVVTVALFTAIAAASVAVPVIGYLAAA  182

Query  189  DRLDDSLERLKDWMEKNHAGMVAAILVVIGLLLLYNGV  226
            + +   LE L+ W+  N+A ++A +L+VIG++++  G+
Sbjct  183  EAMSGPLEELRCWLTSNNATVMAVLLLVIGVMMIGKGI  220


>gi|326384790|ref|ZP_08206466.1| hypothetical protein SCNU_17697 [Gordonia neofelifaecis NRRL 
B-59395]
 gi|326196452|gb|EGD53650.1| hypothetical protein SCNU_17697 [Gordonia neofelifaecis NRRL 
B-59395]
Length=214

 Score =  100 bits (249),  Expect = 2e-19, Method: Compositional matrix adjust.
 Identities = 58/173 (34%), Positives = 98/173 (57%), Gaps = 4/173 (2%)

Query  54   GWLLGLAVVTAVFVAASGALGGLSTTSPAWASWLRVVLGSALIVFGVLRWLTRHRHTEMP  113
            GW+LGLA  T +F+    +  G+S  +     W+++VLG  L+  G+ +WLTR R    P
Sbjct  41   GWVLGLASATGLFILLGRSAQGVSAVT----YWIQLVLGVLLVGEGLRQWLTRGRPRPTP  96

Query  114  GWMRAFASFTPARAGLVGAVLVVVRPEVLIICAAAGLAIGSGGHGAAGSWIYTAFFAMLA  173
             W+ A     PA    +G  +  + P++L++CAAAG+AIG+         +    F ++ 
Sbjct  97   RWLSAVDELVPAAGFGLGLAVSALNPKILVLCAAAGIAIGTTTAAVRDDVLALVVFTLVG  156

Query  174  ASTVAIPILAYVAAGDRLDDSLERLKDWMEKNHAGMVAAILVVIGLLLLYNGV  226
            + TV +P+ AY  A DRL  +L+RLK W++ ++  +VA +L+ IG++L    +
Sbjct  157  SWTVLVPVAAYQIAADRLRGTLDRLKSWLDVHNRVVVAVLLITIGIVLTVRAI  209


>gi|226363618|ref|YP_002781400.1| hypothetical protein ROP_42080 [Rhodococcus opacus B4]
 gi|226242107|dbj|BAH52455.1| hypothetical membrane protein [Rhodococcus opacus B4]
Length=221

 Score = 95.5 bits (236),  Expect = 5e-18, Method: Compositional matrix adjust.
 Identities = 73/214 (35%), Positives = 129/214 (61%), Gaps = 1/214 (0%)

Query  13   SVLTGLVPLALVIALSPLSVIPAVLVVHSPQPRPSSLAFLGGWLLGLAVVTAVFVAASGA  72
            SV+  L+PLA+ +A+SP+ +I  +L++ S +   +S  F  GW+LG+ V T +FV  +G+
Sbjct  3    SVIGELLPLAVGVAISPIPIIAVILMLLSKRAGGASAGFGVGWILGIVVATGIFVLLAGS  62

Query  73   LGGLSTTSP-AWASWLRVVLGSALIVFGVLRWLTRHRHTEMPGWMRAFASFTPARAGLVG  131
            +    +  P A  SW++VVLG  L+V    +W +R+   E P WM+A       ++  +G
Sbjct  63   VDTSGSDGPSATVSWVKVVLGVLLLVLAGRQWRSRNADAEPPKWMQAIDDLNFVKSTGLG  122

Query  132  AVLVVVRPEVLIICAAAGLAIGSGGHGAAGSWIYTAFFAMLAASTVAIPILAYVAAGDRL  191
              L  + P+ L++C +AG+ IG+ G  A    +    + +LA STV +P++AY  A DR+
Sbjct  123  FALAAINPKNLLLCVSAGVGIGTAGVSAGEQVVALVVYVVLAGSTVLVPVVAYAVAADRM  182

Query  192  DDSLERLKDWMEKNHAGMVAAILVVIGLLLLYNG  225
              +L+ LK W++ N+A +++ +L+V+G ++L  G
Sbjct  183  RGTLDSLKVWLQANNAAVMSVLLLVMGAVVLGKG  216


>gi|258651397|ref|YP_003200553.1| hypothetical protein Namu_1157 [Nakamurella multipartita DSM 
44233]
 gi|258554622|gb|ACV77564.1| hypothetical protein Namu_1157 [Nakamurella multipartita DSM 
44233]
Length=217

 Score = 93.6 bits (231),  Expect = 2e-17, Method: Compositional matrix adjust.
 Identities = 75/213 (36%), Positives = 127/213 (60%), Gaps = 2/213 (0%)

Query  14   VLTGLVPLALVIALSPLSVIPAVLVVHSPQPRPSSLAFLGGWLLGLAVVTAVFVAASGAL  73
            V+  ++PLA+ IA+SP++++ A+L++ S     +SL  L GW++G+     VF   +G +
Sbjct  4    VIGDVLPLAIAIAISPIAIVAAILMLFSTHAGSTSLGLLIGWVVGIVAAVTVFTVITGGV  63

Query  74   GGLSTTSPAWASWLRVVLGSALIVFGVLRWLTRHRHTEMPGWMRAFASFTPARAGLVGAV  133
               +  S A  SW++V LG+ L+  G+ +W  R RH   P WM A       +A  +G  
Sbjct  64   D--AGQSQAGVSWVKVGLGAVLMSAGLRQWHARDRHRSAPKWMAAIDRMGFVQALGLGLA  121

Query  134  LVVVRPEVLIICAAAGLAIGSGGHGAAGSWIYTAFFAMLAASTVAIPILAYVAAGDRLDD  193
            L  + P+ L++ AAAG+AIG+     A + +  A + ++AASTVAIP++AY    DR+  
Sbjct  122  LAAINPKNLLMAAAAGIAIGAAELSVADTVVVVAIYTVIAASTVAIPVVAYAVTRDRMRA  181

Query  194  SLERLKDWMEKNHAGMVAAILVVIGLLLLYNGV  226
             L+R K W+E N+A +++ + +VIG +L+  G+
Sbjct  182  PLDRAKSWLEANNAAVMSVLFLVIGAVLVGKGI  214


>gi|336120340|ref|YP_004575123.1| hypothetical protein MLP_47060 [Microlunatus phosphovorus NM-1]
 gi|334688135|dbj|BAK37720.1| hypothetical protein MLP_47060 [Microlunatus phosphovorus NM-1]
Length=222

 Score = 92.4 bits (228),  Expect = 4e-17, Method: Compositional matrix adjust.
 Identities = 73/221 (34%), Positives = 117/221 (53%), Gaps = 5/221 (2%)

Query  13   SVLTGLVPLALVIALSPLSVIPAVLVVHSPQPRPSSLAFLGGWLLGLAVVTAVFVAASGA  72
             V+  L+P A+ +ALSPL +I  +LV+ S  PR +S  F+ G  + +A V  +   A+  
Sbjct  3    DVVGDLIPFAVGVALSPLPLIAVLLVLGSSSPRAASAFFMVGRYVTVAAVALLAAFAAEL  62

Query  73   LGGLSTTSPAWASWLRVVLGSALI---VFGVLRWLT-RHRHTEMPGWMRAFASFTPARAG  128
            L     T P   + LR+VLG+ LI   V   + W   R R  E+PGWM +    TP  A 
Sbjct  63   LPEQGDT-PFVGAVLRIVLGAVLIGWAVHKTVHWAGGRDREPELPGWMASIQGTTPPGAA  121

Query  129  LVGAVLVVVRPEVLIICAAAGLAIGSGGHGAAGSWIYTAFFAMLAASTVAIPILAYVAAG  188
             +  +L  V  + +     AGL I +G  G   + +    +A+LA   V    + Y+ A 
Sbjct  122  RLAIILSAVNVKEVAFGVGAGLTIAAGRPGPGAAVVVALCYAVLACVGVIAVAVCYLVAA  181

Query  189  DRLDDSLERLKDWMEKNHAGMVAAILVVIGLLLLYNGVHAM  229
            DR+  +LER++DW+  N+  ++A +L+VIG +L+  G+ A+
Sbjct  182  DRVGPALERVRDWLVANNKIIIAGVLLVIGAILMGEGLRAL  222


>gi|256395681|ref|YP_003117245.1| hypothetical protein Caci_6558 [Catenulispora acidiphila DSM 
44928]
 gi|256361907|gb|ACU75404.1| conserved hypothetical protein [Catenulispora acidiphila DSM 
44928]
Length=223

 Score = 89.7 bits (221),  Expect = 3e-16, Method: Compositional matrix adjust.
 Identities = 63/197 (32%), Positives = 95/197 (49%), Gaps = 4/197 (2%)

Query  25   IALSPLSVIPAVLVVHSPQPRPSSLAFLGGWLLGLAVVTAVFVAASGALGGLSTTSPA-W  83
            +A+SPL +I  VL++ +P+ R   LAF  GWLL L +V  V +           ++PA W
Sbjct  15   VAISPLPLIAMVLLLATPRGRADGLAFCAGWLLSLTLVGTVMLLIGAGEDADEGSAPATW  74

Query  84   ASWLRVVLGSALIVFGVLRWLTR---HRHTEMPGWMRAFASFTPARAGLVGAVLVVVRPE  140
             SWL +VLG       V +W  R    R    PGWM      TPARA  +GA+L    P+
Sbjct  75   VSWLTLVLGVLFAFLAVGQWKARPRPGRPARTPGWMAGLDRTTPARAAGLGALLSGANPK  134

Query  141  VLIICAAAGLAIGSGGHGAAGSWIYTAFFAMLAASTVAIPILAYVAAGDRLDDSLERLKD  200
             L +   A   I           +    F ++ +  V +P+  Y+A G +   +LE  KD
Sbjct  135  NLALTVGAAAGIAGATSQPGARAVALVLFVLIGSLCVLVPLGVYLAGGKKAAATLEGWKD  194

Query  201  WMEKNHAGMVAAILVVI  217
            WM  ++A ++  +L V+
Sbjct  195  WMATHNAAIMTTVLAVL  211


>gi|284042993|ref|YP_003393333.1| hypothetical protein Cwoe_1530 [Conexibacter woesei DSM 14684]
 gi|283947214|gb|ADB49958.1| hypothetical protein Cwoe_1530 [Conexibacter woesei DSM 14684]
Length=223

 Score = 89.7 bits (221),  Expect = 3e-16, Method: Compositional matrix adjust.
 Identities = 71/209 (34%), Positives = 110/209 (53%), Gaps = 4/209 (1%)

Query  25   IALSPLSVIPAVLVVHSPQPRPSSLAFLGGWLLGLAVV-TAVFVAASGALGGLSTTSPAW  83
            +ALSP+ +I  VL++ +P+ R +  AF+ GW+LG+AVV T V + A GA          W
Sbjct  15   VALSPIPIIAVVLMLATPRGRVNGPAFILGWVLGIAVVGTIVLLVAGGADASEGGEPATW  74

Query  84   ASWLRVVLGSALIVFGVLRWLTRHRHTE---MPGWMRAFASFTPARAGLVGAVLVVVRPE  140
             S L++VLG  L+     +W  R R TE   +PGWMR    FTP RA  +   L  + P+
Sbjct  75   VSILKLVLGVLLLGLAWKQWKGRPRGTEQARLPGWMRTIDGFTPPRAIAMAVALSAINPK  134

Query  141  VLIICAAAGLAIGSGGHGAAGSWIYTAFFAMLAASTVAIPILAYVAAGDRLDDSLERLKD  200
             L++   A  AI   G G     +  A F ++A     +P+  Y   G+R    L+ LK 
Sbjct  135  NLVLVVGAAAAIAQTGAGTGDQAVALAVFTLVATLGPGLPVAIYFGLGERATAILDELKT  194

Query  201  WMEKNHAGMVAAILVVIGLLLLYNGVHAM  229
            WM +N+  ++  I ++IG  L+ +G+  +
Sbjct  195  WMSRNNGVIMTVIALIIGAKLIGDGISGL  223


>gi|229818717|ref|YP_002880243.1| hypothetical protein Bcav_0216 [Beutenbergia cavernae DSM 12333]
 gi|229564630|gb|ACQ78481.1| conserved hypothetical protein [Beutenbergia cavernae DSM 12333]
Length=223

 Score = 89.0 bits (219),  Expect = 5e-16, Method: Compositional matrix adjust.
 Identities = 66/208 (32%), Positives = 116/208 (56%), Gaps = 3/208 (1%)

Query  13   SVLTGLVPLALVIALSPLSVIPAVLVVHSPQPRPSSLAFLGGWLLGLAVVTAVFVAASGA  72
             VL   +PLA+ IALSPL VI  +L++  P+   +   F    ++ LAV+  + VAAS A
Sbjct  6    EVLGATLPLAVAIALSPLPVIALLLLLSGPRGTAAGTLFALSRVIALAVLLGIVVAASDA  65

Query  73   LGGLSTTSPAWASWLRVVLGSALIVFGVLRWLTRHR--HTEMPGWMRAFASFTPARAGLV  130
            +  L T + +  + +R+V+G+AL+V G+ RW  R      E+P W+ +     P+R  ++
Sbjct  66   VEHL-TGAASLPAVVRLVIGAALVVLGLTRWRPRPDDGEPELPRWLASITEAPPSRGLVL  124

Query  131  GAVLVVVRPEVLIICAAAGLAIGSGGHGAAGSWIYTAFFAMLAASTVAIPILAYVAAGDR  190
            GA++ +  P+ L    AAG+++G             A   +++A +V  P++A V A  R
Sbjct  125  GAIVTISNPKELAFLLAAGVSLGGSAVSGLQEVGIAALLVVISALSVLAPLVAMVVAPHR  184

Query  191  LDDSLERLKDWMEKNHAGMVAAILVVIG  218
            +  +L+RL+ W+  N + ++  +L+VIG
Sbjct  185  VAPALDRLRRWLTTNTSLVMGVLLIVIG  212


>gi|311896827|dbj|BAJ29235.1| hypothetical protein KSE_34280 [Kitasatospora setae KM-6054]
Length=222

 Score = 87.8 bits (216),  Expect = 1e-15, Method: Compositional matrix adjust.
 Identities = 63/212 (30%), Positives = 113/212 (54%), Gaps = 6/212 (2%)

Query  22   ALVIALSPLSVIPAVLVVHSPQPRPSSLAFLGGWLLGL-AVVTAVFVAASGALGGLSTTS  80
            A+ IA+SPL +I  +L++ +P+ R + +AF  GW++ L AV TAV +A SG     S  +
Sbjct  12   AVGIAISPLPLIAVILMLATPRGRSNGIAFTAGWVVALGAVTTAVVLAGSGI--DSSAGT  69

Query  81   PAWASWLRVVLGSALIVFGVLRWLTRHR---HTEMPGWMRAFASFTPARAGLVGAVLVVV  137
            P W+ W+++ LG   ++    +W  R R     E PGWMRA   F P ++  + AVLV  
Sbjct  70   PDWSYWVKLGLGVLFLLLAARQWRGRPRAGQTAEQPGWMRAIDRFGPPKSAGLAAVLVAA  129

Query  138  RPEVLIICAAAGLAIGSGGHGAAGSWIYTAFFAMLAASTVAIPILAYVAAGDRLDDSLER  197
             P+ L++     ++I + G    G  +  A   ++ +    +P+  Y+  G R  + L  
Sbjct  130  NPKNLVLAVGGAVSIATSGASGGGKAVAGALLVLIGSLCTLLPLGVYLLGGARATEVLGG  189

Query  198  LKDWMEKNHAGMVAAILVVIGLLLLYNGVHAM  229
             K WM  +++ ++  +L+V+G+  + + V  +
Sbjct  190  WKAWMSAHNSAIMIVLLLVLGVKYVGDAVSGL  221


>gi|169627859|ref|YP_001701508.1| hypothetical protein MAB_0758 [Mycobacterium abscessus ATCC 19977]
 gi|169239826|emb|CAM60854.1| Conserved hypothetical protein [Mycobacterium abscessus]
Length=59

 Score = 86.3 bits (212),  Expect = 3e-15, Method: Compositional matrix adjust.
 Identities = 37/56 (67%), Positives = 53/56 (95%), Gaps = 0/56 (0%)

Query  174  ASTVAIPILAYVAAGDRLDDSLERLKDWMEKNHAGMVAAILVVIGLLLLYNGVHAM  229
            +++VA+PILAYVAAG RLDD++ RLKDWM+KN+A ++AAIL+VIG+++LYNG+HA+
Sbjct  3    SASVAVPILAYVAAGHRLDDAMRRLKDWMDKNNAALMAAILIVIGVMVLYNGIHAL  58


>gi|229819255|ref|YP_002880781.1| hypothetical protein Bcav_0758 [Beutenbergia cavernae DSM 12333]
 gi|229565168|gb|ACQ79019.1| conserved hypothetical protein [Beutenbergia cavernae DSM 12333]
Length=223

 Score = 84.7 bits (208),  Expect = 9e-15, Method: Compositional matrix adjust.
 Identities = 64/215 (30%), Positives = 124/215 (58%), Gaps = 4/215 (1%)

Query  19   VPLALVIALSPLSVIPAVLVVHSPQPRPSSLAFLGGWLLGLAVV-TAVFVAASGALGGLS  77
            +P+A+ + +SP+ ++  VL++ + + R ++ +FL GW++G+A+V T V +   GA     
Sbjct  9    LPIAVGVLVSPMPIVAVVLMLVTKRARSNAFSFLLGWVVGVALVGTLVILLMGGAADSDD  68

Query  78   TTSPAWASWLRVVLGSALIVFGVLRWLTRHRHTEMP---GWMRAFASFTPARAGLVGAVL  134
              +P WA+ +++VLG  L++  + +W  R +  E P    WM A   FTP +A  +  +L
Sbjct  69   GGTPLWAAIVKIVLGVGLLLLALKQWRGRPKRGEEPPAPRWMAAIEGFTPPKAFGLAFLL  128

Query  135  VVVRPEVLIICAAAGLAIGSGGHGAAGSWIYTAFFAMLAASTVAIPILAYVAAGDRLDDS  194
              + P+ L++  +   AI S     +  ++  A F ++A   VA P++ Y+A G R    
Sbjct  129  GAINPKNLLLVVSGAAAIVSATSERSDQFVALAVFVVVATIGVAAPVVVYLAMGTRAGAV  188

Query  195  LERLKDWMEKNHAGMVAAILVVIGLLLLYNGVHAM  229
            L+ LK WM +N+A ++  +L+V+G+ ++ +G+ A+
Sbjct  189  LDDLKHWMVQNNAAIMTVLLLVLGMKMIGDGIGAL  223


>gi|226308704|ref|YP_002768664.1| hypothetical protein RER_52170 [Rhodococcus erythropolis PR4]
 gi|226187821|dbj|BAH35925.1| hypothetical membrane protein [Rhodococcus erythropolis PR4]
Length=225

 Score = 78.6 bits (192),  Expect = 7e-13, Method: Compositional matrix adjust.
 Identities = 62/216 (29%), Positives = 105/216 (49%), Gaps = 7/216 (3%)

Query  19   VPLALVIALSPLSVIPAVLVVHSPQPRPSSLAFLGGWLLGLAVVTAVFVAASGALGGLST  78
            + L L+    P++VI  VLV+ +      +++FL GW+LG++ V AV +  +      S 
Sbjct  11   IALGLLFVSMPMAVI--VLVMITAGAHRGAVSFLLGWVLGISAVVAVTIVIADYSFAESE  68

Query  79   TSPA--WASWLRVVLGSALIVFGVLRWLTRHRHTE---MPGWMRAFASFTPARAGLVGAV  133
            +S A  W+S +R+VLG  L      +W  R R      +P WM++    TP +A  +  +
Sbjct  69   SSQASVWSSVVRIVLGLVLFGLAYKQWRARPRDGSDPTVPKWMKSIDGLTPRKAFGLAFL  128

Query  134  LVVVRPEVLIICAAAGLAIGSGGHGAAGSWIYTAFFAMLAASTVAIPILAYVAAGDRLDD  193
               V P+   +  +    I    +  A   +    F ++A+  +A PIL  V +G R D+
Sbjct  129  SAAVNPKNAALAVSGAATIAVATNVVAQQIVAAVIFTVIASVGIASPILVKVFSGKRADE  188

Query  194  SLERLKDWMEKNHAGMVAAILVVIGLLLLYNGVHAM  229
             L   K WM  N+A M+  IL ++G  +L  G+  +
Sbjct  189  ILASAKSWMTANNAVMMTVILAILGATVLGEGLSGL  224


>gi|229488938|ref|ZP_04382804.1| conserved hypothetical protein [Rhodococcus erythropolis SK121]
 gi|229324442|gb|EEN90197.1| conserved hypothetical protein [Rhodococcus erythropolis SK121]
Length=225

 Score = 76.3 bits (186),  Expect = 3e-12, Method: Compositional matrix adjust.
 Identities = 63/218 (29%), Positives = 109/218 (50%), Gaps = 11/218 (5%)

Query  19   VPLALVIALSPLSVIPAVLVVHSPQPRPSSLAFLGGWLLGLAVVTAV--FVAASGALGGL  76
            + L L+    P++VI  VLV+ +      + +FL GW+LG++ V AV   +A        
Sbjct  11   IALGLLFVSMPMAVI--VLVMITAGAHRGAASFLLGWVLGISAVVAVTIVIADYSFAESE  68

Query  77   STTSPAWASWLRVVLGSALIVFGV--LRWLTRHRHTE---MPGWMRAFASFTPARAGLVG  131
            S+ +  W+S +R+VLG  L++FG+   +W  R R+     +P WM++    TP +A  + 
Sbjct  69   SSQTSMWSSVVRIVLG--LVLFGLAYKQWRARPRNGSEPTVPKWMKSVDGLTPRKAFGLA  126

Query  132  AVLVVVRPEVLIICAAAGLAIGSGGHGAAGSWIYTAFFAMLAASTVAIPILAYVAAGDRL  191
             +   V P+   +  +    I    +  A   +    F ++A+  +A PIL  V +G R 
Sbjct  127  FLSAAVNPKNAALAVSGAATIAVATNVVAQQIVAAVIFTVIASVGIASPILVKVFSGKRA  186

Query  192  DDSLERLKDWMEKNHAGMVAAILVVIGLLLLYNGVHAM  229
            D+ L   K WM  N+A M+  IL ++G  +L  G+  +
Sbjct  187  DEILASAKAWMTANNAVMMTVILTILGATVLGEGLSGL  224


>gi|271965848|ref|YP_003340044.1| hypothetical protein Sros_4431 [Streptosporangium roseum DSM 
43021]
 gi|270509023|gb|ACZ87301.1| hypothetical protein Sros_4431 [Streptosporangium roseum DSM 
43021]
Length=225

 Score = 74.7 bits (182),  Expect = 1e-11, Method: Compositional matrix adjust.
 Identities = 68/212 (33%), Positives = 110/212 (52%), Gaps = 8/212 (3%)

Query  21   LALVIALSPLSVIPAVLVVHSPQPRPSSLAFLGGWLLGLAVVTAVFVAASGALGGLSTTS  80
            LA  +A+SPL ++  +LV+ +PQ R + L F  GWL GL+ +  + +A  GA G  +   
Sbjct  11   LAAGVAVSPLPIVAIILVLATPQGRLNGLLFTLGWLAGLSALGGIMLAIGGAGGSSTHHQ  70

Query  81   PA-WASWLRVVLGSALIVFGVLRWLTRHR-----HTEMPGWMRAFASFTPARAGLVGAVL  134
            PA W   L++VLG  L++FG  +W  RHR       E+P WM A   FTP +   +G  L
Sbjct  71   PATWVGGLKLVLGLLLVLFGTRQW--RHRPKGATQAELPKWMAAIDRFTPIKVLGLGLAL  128

Query  135  VVVRPEVLIICAAAGLAIGSGGHGAAGSWIYTAFFAMLAASTVAIPILAYVAAGDRLDDS  194
                 +   +  AA  +I + G  A       A F ++ +  +  P+  ++  GD+    
Sbjct  129  SAANLKNAPLTLAAAASISASGLPAGQQIASLAVFVIIGSLGLLAPLGVFLFMGDQAKTV  188

Query  195  LERLKDWMEKNHAGMVAAILVVIGLLLLYNGV  226
            L   KDW  +++  ++AA+  V+GL LL +G+
Sbjct  189  LGGWKDWAAQHNVAVMAALFFVLGLKLLGDGI  220


>gi|302562765|ref|ZP_07315107.1| integral membrane protein [Streptomyces griseoflavus Tu4000]
 gi|302480383|gb|EFL43476.1| integral membrane protein [Streptomyces griseoflavus Tu4000]
Length=225

 Score = 73.9 bits (180),  Expect = 2e-11, Method: Compositional matrix adjust.
 Identities = 68/209 (33%), Positives = 105/209 (51%), Gaps = 4/209 (1%)

Query  25   IALSPLSVIPAVLVVHSPQPRPSSLAFLGGWLLGLAVVTAVFVAASGALGGLSTTSPA-W  83
            +ALS   +I  VL++ +P+ R +  A L GW LGLA+V  + +  SG  G      PA W
Sbjct  15   VALSAFPIIGVVLMLATPRARSNGPAMLLGWALGLALVGTIVLLVSGGAGPTDQGQPADW  74

Query  84   ASWLRVVLGSALIVFGVLRWLTRHRHTE---MPGWMRAFASFTPARAGLVGAVLVVVRPE  140
             S L + LG  L+   V  W  R R  +   +P WMR   SFTP +A  +G  L  + P+
Sbjct  75   VSALDIALGVLLLWVAVKEWRGRPRSDQEVTLPKWMRTVDSFTPVKALALGTALSALNPK  134

Query  141  VLIICAAAGLAIGSGGHGAAGSWIYTAFFAMLAASTVAIPILAYVAAGDRLDDSLERLKD  200
             L++  AA  AI   G  A    +  A + +L A     P++ Y    +R    L+ LK 
Sbjct  135  NLLLSIAAASAIARTGTSAGAQAVALAVYVVLGALGPGAPVVLYFVLKERSKHILDGLKL  194

Query  201  WMEKNHAGMVAAILVVIGLLLLYNGVHAM  229
            WME+N+  ++A I ++    L+ +G+  +
Sbjct  195  WMERNNTAIIAVICLLFAAKLVGDGISDL  223


>gi|315280805|ref|ZP_07869598.1| membrane protein, putative [Listeria marthii FSL S4-120]
 gi|313615541|gb|EFR88893.1| membrane protein, putative [Listeria marthii FSL S4-120]
Length=219

 Score = 69.3 bits (168),  Expect = 4e-10, Method: Compositional matrix adjust.
 Identities = 50/213 (24%), Positives = 108/213 (51%), Gaps = 9/213 (4%)

Query  13   SVLTGLVPLALVIALSPLSVIPAVLVVHSPQPRPSSLAFLGGWLLGLAVVTAVFVAASGA  72
            S  + ++  A+ I +SP  ++  +L++ S + R +S+ +  GW++G     A+F      
Sbjct  3    SAFSAILSPAVGILISPFPIVGLILILLSNKARINSIFYTVGWIVG---NIAIFFIGLFL  59

Query  73   LGGLSTTSPAWASWLRVVLGSALIVFGVL---RWLTRHRHTEM---PGWMRAFASFTPAR  126
            +    ++S   ++ ++VVL     +  +L    +  R R+ E    P W    ++  P  
Sbjct  60   MSSAVSSSGDQSTLVKVVLIVLGALLILLGAHDFTKRPRNGETAATPKWFEKMSNIKPGG  119

Query  127  AGLVGAVLVVVRPEVLIICAAAGLAIGSGGHGAAGSWIYTAFFAMLAASTVAIPILAYVA  186
            A +   VL  V P+ +++   AG+++G+           T  F ++A  ++ IP +A++ 
Sbjct  120  AMIFAFVLSAVNPKNMLLSLTAGVSVGALNLSGGQETTATIIFGIIACCSIYIPTIAFLL  179

Query  187  AGDRLDDSLERLKDWMEKNHAGMVAAILVVIGL  219
            AG RL++ L+  + W+ +N++ ++A + + IGL
Sbjct  180  AGKRLNNVLDSTRKWLIQNNSVIMAVLFLFIGL  212



Lambda     K      H
   0.326    0.138    0.435 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 297403917052


  Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
    Posted date:  Sep 5, 2011  4:36 AM
  Number of letters in database: 5,219,829,388
  Number of sequences in database:  15,229,318



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40