BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv3483c
Length=220
Score E
Sequences producing significant alignments: (Bits) Value
gi|15610619|ref|NP_218000.1| hypothetical protein Rv3483c [Mycob... 439 2e-121
gi|289449185|ref|ZP_06438929.1| conserved hypothetical protein [... 436 1e-120
gi|340628451|ref|YP_004746903.1| hypothetical protein MCAN_34971... 436 2e-120
gi|308406173|ref|ZP_07495379.2| hypothetical protein TMLG_03918 ... 368 3e-100
gi|308232477|ref|ZP_07416169.2| hypothetical protein TMAG_03858 ... 363 9e-99
gi|289759643|ref|ZP_06519021.1| conserved hypothetical protein [... 324 5e-87
gi|240170033|ref|ZP_04748692.1| hypothetical protein MkanA1_1202... 233 2e-59
gi|183984933|ref|YP_001853224.1| hypothetical protein MMAR_4965 ... 220 1e-55
gi|118619233|ref|YP_907565.1| hypothetical protein MUL_4038 [Myc... 202 3e-50
gi|183981569|ref|YP_001849860.1| hypothetical protein MMAR_1553 ... 102 6e-20
gi|118618775|ref|YP_907107.1| hypothetical protein MUL_3477 [Myc... 101 1e-19
gi|240172266|ref|ZP_04750925.1| putative lipoprotein [Mycobacter... 82.4 4e-14
gi|255325578|ref|ZP_05366678.1| conserved hypothetical protein [... 82.0 5e-14
gi|333989859|ref|YP_004522473.1| hypothetical protein JDM601_121... 82.0 5e-14
gi|108800932|ref|YP_641129.1| protein LprE [Mycobacterium sp. MC... 75.9 4e-12
gi|315443279|ref|YP_004076158.1| hypothetical protein Mspyr1_165... 74.3 1e-11
gi|120405423|ref|YP_955252.1| LprE [Mycobacterium vanbaalenii PY... 73.9 2e-11
gi|145222812|ref|YP_001133490.1| LprE [Mycobacterium gilvum PYR-... 73.6 2e-11
gi|118473892|ref|YP_889293.1| LprE protein [Mycobacterium smegma... 72.4 4e-11
gi|15827542|ref|NP_301805.1| lipoprotein [Mycobacterium leprae T... 72.0 5e-11
gi|254819462|ref|ZP_05224463.1| LprE [Mycobacterium intracellula... 71.2 9e-11
gi|227542788|ref|ZP_03972837.1| conserved hypothetical protein [... 71.2 9e-11
gi|41408620|ref|NP_961456.1| LprE [Mycobacterium avium subsp. pa... 70.9 1e-10
gi|118464232|ref|YP_880642.1| LprE protein [Mycobacterium avium ... 70.9 1e-10
gi|254774279|ref|ZP_05215795.1| LprE protein [Mycobacterium aviu... 70.5 2e-10
gi|183984162|ref|YP_001852453.1| lipoprotein LprE [Mycobacterium... 70.5 2e-10
gi|118619600|ref|YP_907932.1| lipoprotein LprE [Mycobacterium ul... 70.5 2e-10
gi|15608392|ref|NP_215768.1| lipoprotein LprE [Mycobacterium tub... 70.1 2e-10
gi|340626265|ref|YP_004744717.1| putative lipoprotein LPRE [Myco... 69.3 3e-10
gi|297633801|ref|ZP_06951581.1| lipoprotein lprE [Mycobacterium ... 69.3 4e-10
gi|296170154|ref|ZP_06851751.1| LprE protein [Mycobacterium para... 69.3 4e-10
gi|308375415|ref|ZP_07443807.2| lipoprotein lprE [Mycobacterium ... 69.3 4e-10
gi|289753323|ref|ZP_06512701.1| lipoprotein lprE [Mycobacterium ... 68.9 5e-10
gi|342862129|ref|ZP_08718772.1| LprE [Mycobacterium colombiense ... 68.9 5e-10
gi|227505858|ref|ZP_03935907.1| conserved hypothetical protein [... 67.8 1e-09
gi|227834152|ref|YP_002835859.1| putative secreted protein [Cory... 66.6 2e-09
gi|339294234|gb|AEJ46345.1| lipoprotein lprE [Mycobacterium tube... 65.9 4e-09
gi|172041207|ref|YP_001800921.1| hypothetical protein cur_1527 [... 65.5 6e-09
gi|255325577|ref|ZP_05366677.1| conserved hypothetical protein [... 63.5 2e-08
gi|336324639|ref|YP_004604605.1| hypothetical protein CRES_0078 ... 62.8 3e-08
gi|317508262|ref|ZP_07965942.1| hypothetical protein HMPREF9336_... 62.8 4e-08
gi|262202208|ref|YP_003273416.1| hypothetical protein Gbro_2275 ... 61.6 8e-08
gi|169628493|ref|YP_001702142.1| putative lipoprotein LprE [Myco... 60.8 1e-07
gi|340795076|ref|YP_004760539.1| hypothetical protein CVAR_2116 ... 58.2 9e-07
gi|311740443|ref|ZP_07714271.1| conserved hypothetical protein [... 57.8 1e-06
gi|172041208|ref|YP_001800922.1| hypothetical protein cur_1528 [... 57.4 2e-06
gi|111021790|ref|YP_704762.1| hypothetical protein RHA1_ro04819 ... 56.2 4e-06
gi|296394463|ref|YP_003659347.1| hypothetical protein Srot_2060 ... 55.1 8e-06
gi|227505859|ref|ZP_03935908.1| conserved hypothetical protein [... 54.7 1e-05
gi|312194486|ref|YP_004014547.1| hypothetical protein FraEuI1c_0... 54.7 1e-05
>gi|15610619|ref|NP_218000.1| hypothetical protein Rv3483c [Mycobacterium tuberculosis H37Rv]
gi|15843095|ref|NP_338132.1| hypothetical protein MT3587 [Mycobacterium tuberculosis CDC1551]
gi|31794659|ref|NP_857152.1| hypothetical protein Mb3513c [Mycobacterium bovis AF2122/97]
61 more sequence titles
Length=220
Score = 439 bits (1128), Expect = 2e-121, Method: Compositional matrix adjust.
Identities = 219/220 (99%), Positives = 220/220 (100%), Gaps = 0/220 (0%)
Query 1 VSDEIDPDWPAPAYQPSDDVDTTPPAPGGSWPTAWLVALVVLACVAAAVVAYAGMHRVRP 60
+SDEIDPDWPAPAYQPSDDVDTTPPAPGGSWPTAWLVALVVLACVAAAVVAYAGMHRVRP
Sbjct 1 MSDEIDPDWPAPAYQPSDDVDTTPPAPGGSWPTAWLVALVVLACVAAAVVAYAGMHRVRP 60
Query 61 GANQAAPATTSAPARPTSPASQVGPCGPDEATAVRAALAQLAPDSKTGRPWNSTPEDSNY 120
GANQAAPATTSAPARPTSPASQVGPCGPDEATAVRAALAQLAPDSKTGRPWNSTPEDSNY
Sbjct 61 GANQAAPATTSAPARPTSPASQVGPCGPDEATAVRAALAQLAPDSKTGRPWNSTPEDSNY 120
Query 121 DPCADLSAVLVTVQDATNSSPDQALMFHRGTFVGTATPRAYPFTNLIGPASTNDIVVLSY 180
DPCADLSAVLVTVQDATNSSPDQALMFHRGTFVGTATPRAYPFTNLIGPASTNDIVVLSY
Sbjct 121 DPCADLSAVLVTVQDATNSSPDQALMFHRGTFVGTATPRAYPFTNLIGPASTNDIVVLSY 180
Query 181 RTRQSCDGCQDGILTIVGFAWRGDHVQILDSLPELFDAPP 220
RTRQSCDGCQDGILTIVGFAWRGDHVQILDSLPELFDAPP
Sbjct 181 RTRQSCDGCQDGILTIVGFAWRGDHVQILDSLPELFDAPP 220
>gi|289449185|ref|ZP_06438929.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A]
gi|289422143|gb|EFD19344.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A]
Length=220
Score = 436 bits (1121), Expect = 1e-120, Method: Compositional matrix adjust.
Identities = 218/220 (99%), Positives = 219/220 (99%), Gaps = 0/220 (0%)
Query 1 VSDEIDPDWPAPAYQPSDDVDTTPPAPGGSWPTAWLVALVVLACVAAAVVAYAGMHRVRP 60
+SDEIDPDWP PAYQPSDDVDTTPPAPGGSWPTAWLVALVVLACVAAAVVAYAGMHRVRP
Sbjct 1 MSDEIDPDWPPPAYQPSDDVDTTPPAPGGSWPTAWLVALVVLACVAAAVVAYAGMHRVRP 60
Query 61 GANQAAPATTSAPARPTSPASQVGPCGPDEATAVRAALAQLAPDSKTGRPWNSTPEDSNY 120
GANQAAPATTSAPARPTSPASQVGPCGPDEATAVRAALAQLAPDSKTGRPWNSTPEDSNY
Sbjct 61 GANQAAPATTSAPARPTSPASQVGPCGPDEATAVRAALAQLAPDSKTGRPWNSTPEDSNY 120
Query 121 DPCADLSAVLVTVQDATNSSPDQALMFHRGTFVGTATPRAYPFTNLIGPASTNDIVVLSY 180
DPCADLSAVLVTVQDATNSSPDQALMFHRGTFVGTATPRAYPFTNLIGPASTNDIVVLSY
Sbjct 121 DPCADLSAVLVTVQDATNSSPDQALMFHRGTFVGTATPRAYPFTNLIGPASTNDIVVLSY 180
Query 181 RTRQSCDGCQDGILTIVGFAWRGDHVQILDSLPELFDAPP 220
RTRQSCDGCQDGILTIVGFAWRGDHVQILDSLPELFDAPP
Sbjct 181 RTRQSCDGCQDGILTIVGFAWRGDHVQILDSLPELFDAPP 220
>gi|340628451|ref|YP_004746903.1| hypothetical protein MCAN_34971 [Mycobacterium canettii CIPT
140010059]
gi|340006641|emb|CCC45828.1| conserved hypothetical protein [Mycobacterium canettii CIPT 140010059]
Length=220
Score = 436 bits (1120), Expect = 2e-120, Method: Compositional matrix adjust.
Identities = 218/220 (99%), Positives = 219/220 (99%), Gaps = 0/220 (0%)
Query 1 VSDEIDPDWPAPAYQPSDDVDTTPPAPGGSWPTAWLVALVVLACVAAAVVAYAGMHRVRP 60
+SDEIDPDWPAPAYQPSDDVDTTPPAPG SWPTAWLVALVVLACVAAAVVAYAGMHRVRP
Sbjct 1 MSDEIDPDWPAPAYQPSDDVDTTPPAPGRSWPTAWLVALVVLACVAAAVVAYAGMHRVRP 60
Query 61 GANQAAPATTSAPARPTSPASQVGPCGPDEATAVRAALAQLAPDSKTGRPWNSTPEDSNY 120
GANQAAPATTSAPARPTSPASQVGPCGPDEATAVRAALAQLAPDSKTGRPWNSTPEDSNY
Sbjct 61 GANQAAPATTSAPARPTSPASQVGPCGPDEATAVRAALAQLAPDSKTGRPWNSTPEDSNY 120
Query 121 DPCADLSAVLVTVQDATNSSPDQALMFHRGTFVGTATPRAYPFTNLIGPASTNDIVVLSY 180
DPCADLSAVLVTVQDATNSSPDQALMFHRGTFVGTATPRAYPFTNLIGPASTNDIVVLSY
Sbjct 121 DPCADLSAVLVTVQDATNSSPDQALMFHRGTFVGTATPRAYPFTNLIGPASTNDIVVLSY 180
Query 181 RTRQSCDGCQDGILTIVGFAWRGDHVQILDSLPELFDAPP 220
RTRQSCDGCQDGILTIVGFAWRGDHVQILDSLPELFDAPP
Sbjct 181 RTRQSCDGCQDGILTIVGFAWRGDHVQILDSLPELFDAPP 220
>gi|308406173|ref|ZP_07495379.2| hypothetical protein TMLG_03918 [Mycobacterium tuberculosis SUMu012]
gi|308364281|gb|EFP53132.1| hypothetical protein TMLG_03918 [Mycobacterium tuberculosis SUMu012]
gi|323717825|gb|EGB27016.1| hypothetical protein TMMG_03657 [Mycobacterium tuberculosis CDC1551A]
Length=184
Score = 368 bits (945), Expect = 3e-100, Method: Compositional matrix adjust.
Identities = 183/184 (99%), Positives = 184/184 (100%), Gaps = 0/184 (0%)
Query 37 VALVVLACVAAAVVAYAGMHRVRPGANQAAPATTSAPARPTSPASQVGPCGPDEATAVRA 96
+ALVVLACVAAAVVAYAGMHRVRPGANQAAPATTSAPARPTSPASQVGPCGPDEATAVRA
Sbjct 1 MALVVLACVAAAVVAYAGMHRVRPGANQAAPATTSAPARPTSPASQVGPCGPDEATAVRA 60
Query 97 ALAQLAPDSKTGRPWNSTPEDSNYDPCADLSAVLVTVQDATNSSPDQALMFHRGTFVGTA 156
ALAQLAPDSKTGRPWNSTPEDSNYDPCADLSAVLVTVQDATNSSPDQALMFHRGTFVGTA
Sbjct 61 ALAQLAPDSKTGRPWNSTPEDSNYDPCADLSAVLVTVQDATNSSPDQALMFHRGTFVGTA 120
Query 157 TPRAYPFTNLIGPASTNDIVVLSYRTRQSCDGCQDGILTIVGFAWRGDHVQILDSLPELF 216
TPRAYPFTNLIGPASTNDIVVLSYRTRQSCDGCQDGILTIVGFAWRGDHVQILDSLPELF
Sbjct 121 TPRAYPFTNLIGPASTNDIVVLSYRTRQSCDGCQDGILTIVGFAWRGDHVQILDSLPELF 180
Query 217 DAPP 220
DAPP
Sbjct 181 DAPP 184
>gi|308232477|ref|ZP_07416169.2| hypothetical protein TMAG_03858 [Mycobacterium tuberculosis SUMu001]
gi|308370283|ref|ZP_07420899.2| hypothetical protein TMBG_03959 [Mycobacterium tuberculosis SUMu002]
gi|308378346|ref|ZP_07482270.2| hypothetical protein TMIG_03768 [Mycobacterium tuberculosis SUMu009]
gi|308213841|gb|EFO73240.1| hypothetical protein TMAG_03858 [Mycobacterium tuberculosis SUMu001]
gi|308324786|gb|EFP13637.1| hypothetical protein TMBG_03959 [Mycobacterium tuberculosis SUMu002]
gi|308352869|gb|EFP41720.1| hypothetical protein TMIG_03768 [Mycobacterium tuberculosis SUMu009]
Length=181
Score = 363 bits (932), Expect = 9e-99, Method: Compositional matrix adjust.
Identities = 180/181 (99%), Positives = 181/181 (100%), Gaps = 0/181 (0%)
Query 40 VVLACVAAAVVAYAGMHRVRPGANQAAPATTSAPARPTSPASQVGPCGPDEATAVRAALA 99
+VLACVAAAVVAYAGMHRVRPGANQAAPATTSAPARPTSPASQVGPCGPDEATAVRAALA
Sbjct 1 MVLACVAAAVVAYAGMHRVRPGANQAAPATTSAPARPTSPASQVGPCGPDEATAVRAALA 60
Query 100 QLAPDSKTGRPWNSTPEDSNYDPCADLSAVLVTVQDATNSSPDQALMFHRGTFVGTATPR 159
QLAPDSKTGRPWNSTPEDSNYDPCADLSAVLVTVQDATNSSPDQALMFHRGTFVGTATPR
Sbjct 61 QLAPDSKTGRPWNSTPEDSNYDPCADLSAVLVTVQDATNSSPDQALMFHRGTFVGTATPR 120
Query 160 AYPFTNLIGPASTNDIVVLSYRTRQSCDGCQDGILTIVGFAWRGDHVQILDSLPELFDAP 219
AYPFTNLIGPASTNDIVVLSYRTRQSCDGCQDGILTIVGFAWRGDHVQILDSLPELFDAP
Sbjct 121 AYPFTNLIGPASTNDIVVLSYRTRQSCDGCQDGILTIVGFAWRGDHVQILDSLPELFDAP 180
Query 220 P 220
P
Sbjct 181 P 181
>gi|289759643|ref|ZP_06519021.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
gi|289715207|gb|EFD79219.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
Length=186
Score = 324 bits (831), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 163/166 (99%), Positives = 164/166 (99%), Gaps = 0/166 (0%)
Query 1 VSDEIDPDWPAPAYQPSDDVDTTPPAPGGSWPTAWLVALVVLACVAAAVVAYAGMHRVRP 60
+SDEIDPDWPAPAYQPSDDVDTTPPAPGGSWPTAWLVALVVLACVAAAVVAYAGMHRVRP
Sbjct 1 MSDEIDPDWPAPAYQPSDDVDTTPPAPGGSWPTAWLVALVVLACVAAAVVAYAGMHRVRP 60
Query 61 GANQAAPATTSAPARPTSPASQVGPCGPDEATAVRAALAQLAPDSKTGRPWNSTPEDSNY 120
GANQAAPATTSAPARPTSPASQVGPCGPDEATAVRAALAQLAPDSKTGRPWNSTPEDSNY
Sbjct 61 GANQAAPATTSAPARPTSPASQVGPCGPDEATAVRAALAQLAPDSKTGRPWNSTPEDSNY 120
Query 121 DPCADLSAVLVTVQDATNSSPDQALMFHRGTFVGTATPRAYPFTNL 166
DPCADLSAVLVTVQDATNSSPDQALMFHRGTFVGTATPRAYPFT
Sbjct 121 DPCADLSAVLVTVQDATNSSPDQALMFHRGTFVGTATPRAYPFTKF 166
>gi|240170033|ref|ZP_04748692.1| hypothetical protein MkanA1_12021 [Mycobacterium kansasii ATCC
12478]
Length=229
Score = 233 bits (594), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 143/232 (62%), Positives = 166/232 (72%), Gaps = 16/232 (6%)
Query 1 VSDEIDPDWPAPAYQPSDDVDTTPPAP--------GGSWPTAWLVALVVLACVAAAVVA- 51
S +IDP+WP PAY+PSDDVDTTPP P G W A +A+V + + V
Sbjct 2 ASGDIDPNWPPPAYEPSDDVDTTPPNPPSGPARSARGVWLVAAFLAVVAVVALVIVAVVV 61
Query 52 YAGMHRVRPGAN-QAAPATTSAPARP--TSPASQVGPCGPDEATAVRAALAQLAPDSKTG 108
++G + RPGA AAPAT AP+ P T+ + GPCGPDEATAV AALAQL D KTG
Sbjct 62 FSG--KPRPGAGPSAAPAT--APSNPPTTTSTAPAGPCGPDEATAVSAALAQLPADKKTG 117
Query 109 RPWNSTPEDSNYDPCADLSAVLVTVQDATNSSPDQALMFHRGTFVGTATPRAYPFTNLIG 168
+ WN TPE S+YDPCADLSAV+VTV DAT SSPDQALMFHRG FVGTAT AYPFT L
Sbjct 118 KAWNPTPEFSDYDPCADLSAVVVTVVDATRSSPDQALMFHRGAFVGTATAVAYPFTELEV 177
Query 169 PASTNDIVVLSYRTRQSCDGCQDGILTIVGFAWRGDHVQILDSLPELFDAPP 220
PAST+D+VVL+YR+RQSCD C DG LT VGF W+GDHVQ+LD PE D+PP
Sbjct 178 PASTDDLVVLTYRSRQSCDACDDGTLTTVGFQWQGDHVQMLDPPPESLDSPP 229
>gi|183984933|ref|YP_001853224.1| hypothetical protein MMAR_4965 [Mycobacterium marinum M]
gi|183178259|gb|ACC43369.1| conserved hypothetical membrane protein [Mycobacterium marinum
M]
Length=234
Score = 220 bits (561), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 132/222 (60%), Positives = 154/222 (70%), Gaps = 13/222 (5%)
Query 2 SDEIDPDWPAPAYQPSDDVDTTPPAP-----GGSWPTAWLVALVVLACVAAA--VVAYAG 54
S EIDP+WP P YQPSD+VDTTPP+ GGS WLV +V A ++AY+
Sbjct 3 SGEIDPNWPPPVYQPSDNVDTTPPSSQPGVRGGSGRVIWLVVALVAAVCVGVVAIIAYSA 62
Query 55 MHRVRPGANQAAPATTSAPARP-----TSPASQV-GPCGPDEATAVRAALAQLAPDSKTG 108
+ AT A TSP S G CGPDEA AV AALA L PD KTG
Sbjct 63 RRQPAASPPATTAATAPATTSASTPVATSPTSAPPGSCGPDEAAAVAAALATLPPDKKTG 122
Query 109 RPWNSTPEDSNYDPCADLSAVLVTVQDATNSSPDQALMFHRGTFVGTATPRAYPFTNLIG 168
RPWN TPE S+YDPCA+LSAV+VTV DAT SSPD+AL+FHRG FVGTATP AYPFT L
Sbjct 123 RPWNPTPEFSDYDPCAELSAVVVTVLDATRSSPDEALIFHRGQFVGTATPEAYPFTQLEA 182
Query 169 PASTNDIVVLSYRTRQSCDGCQDGILTIVGFAWRGDHVQILD 210
PAST+D+VVL+YR+RQSCD C+DG+LT+VGF W+GDHVQ+LD
Sbjct 183 PASTDDLVVLTYRSRQSCDACEDGVLTVVGFQWQGDHVQMLD 224
>gi|118619233|ref|YP_907565.1| hypothetical protein MUL_4038 [Mycobacterium ulcerans Agy99]
gi|118571343|gb|ABL06094.1| conserved hypothetical membrane protein [Mycobacterium ulcerans
Agy99]
Length=234
Score = 202 bits (514), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 129/221 (59%), Positives = 150/221 (68%), Gaps = 13/221 (5%)
Query 2 SDEIDPDWPAPAYQPSDDVDTTPPAP-----GGSWPTAWLVALVVLACVAAA--VVAYAG 54
S EIDP+WP P YQPSD++DTTPP+ GGS WLV +V A ++AY+
Sbjct 3 SGEIDPNWPPPVYQPSDNIDTTPPSSQPGVRGGSGRVIWLVVALVAAVCVGVVAIIAYSA 62
Query 55 MHRVRPGANQAAPATTSAPARP-----TSPASQV-GPCGPDEATAVRAALAQLAPDSKTG 108
+ AT A TSP S G CGPDEA AV AALA L PD KTG
Sbjct 63 RRQPAASPPATTAATAPATTSATTPVATSPTSAPPGSCGPDEAAAVAAALATLPPDKKTG 122
Query 109 RPWNSTPEDSNYDPCADLSAVLVTVQDATNSSPDQALMFHRGTFVGTATPRAYPFTNLIG 168
RP N TPE S+YDPCA+LSAV+VTV DAT SSPD+ALMFHRG FVGTATP AYPFT L
Sbjct 123 RPRNPTPEFSDYDPCAELSAVVVTVVDATRSSPDEALMFHRGQFVGTATPEAYPFTQLEA 182
Query 169 PASTNDIVVLSYRTRQSCDGCQDGILTIVGFAWRGDHVQIL 209
AST+D+VVL+YR+RQSCD C+DG LT+VGF W+GDHVQ+L
Sbjct 183 SASTDDLVVLTYRSRQSCDACEDGALTVVGFQWQGDHVQML 223
>gi|183981569|ref|YP_001849860.1| hypothetical protein MMAR_1553 [Mycobacterium marinum M]
gi|183174895|gb|ACC40005.1| conserved hypothetical secreted protein [Mycobacterium marinum
M]
Length=162
Score = 102 bits (253), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 61/146 (42%), Positives = 85/146 (59%), Gaps = 9/146 (6%)
Query 75 RPTSPASQVGP-CGPD-EATAVRAALAQLAPDSKTGRPWNSTPED----SNYDPCADLSA 128
P +P ++ P CG + A ++AA+ L P PW++ P SNY+PC+ LSA
Sbjct 17 NPLAPPAKAEPTCGVNLNAPEIQAAIKSL-PTLPQSYPWDTNPRSFDPSSNYNPCSTLSA 75
Query 129 VLVTVQDATNSSPDQALMFHRGTFVGTATPRAYPFTNLIGPASTNDIVVLSYRT-RQSCD 187
V+++V+ AT SSPD L+FH GT G AT +AY FT L +T+D V L Y+ R C
Sbjct 76 VIISVEGATGSSPDLVLLFHNGTSAGIATTKAYSFTTLNAAKTTDDTVALDYKDGRDVCT 135
Query 188 GCQDGILTIVGFAWRGDHVQILDSLP 213
C G +T V + W+GDHV +LD P
Sbjct 136 ACP-GPITTVRYEWKGDHVAMLDPAP 160
>gi|118618775|ref|YP_907107.1| hypothetical protein MUL_3477 [Mycobacterium ulcerans Agy99]
gi|118570885|gb|ABL05636.1| conserved hypothetical secreted protein [Mycobacterium ulcerans
Agy99]
Length=162
Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/146 (42%), Positives = 83/146 (57%), Gaps = 9/146 (6%)
Query 75 RPTSPASQVGP-CGPD-EATAVRAALAQLAPDSKTGRPWNSTPED----SNYDPCADLSA 128
P +P +Q P CG + ++AA+ L P PW++ P SNY+PC+ LSA
Sbjct 17 NPLAPPAQAEPTCGVNLNVPEIQAAIKSL-PTLPQSYPWDTNPRSFDPSSNYNPCSTLSA 75
Query 129 VLVTVQDATNSSPDQALMFHRGTFVGTATPRAYPFTNLIGPASTNDIVVLSYRT-RQSCD 187
V++ V+ AT SSPD L+FH GT G AT +AY FT L +T+D V L Y+ R C
Sbjct 76 VIIRVEGATGSSPDLVLLFHNGTSAGIATTKAYSFTTLNAAKTTDDTVALDYKDGRDVCT 135
Query 188 GCQDGILTIVGFAWRGDHVQILDSLP 213
C G +T V + W+GDHV +LD P
Sbjct 136 ACP-GPITTVRYEWKGDHVSMLDPAP 160
>gi|240172266|ref|ZP_04750925.1| putative lipoprotein [Mycobacterium kansasii ATCC 12478]
Length=185
Score = 82.4 bits (202), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 48/139 (35%), Positives = 72/139 (52%), Gaps = 7/139 (5%)
Query 76 PTSPASQVGPCGPDEAT-AVRAALAQLAPDSKTGRPWNSTPEDSNYDPCADLSAVLVTVQ 134
PTS A+ PC + A+ A+ +++L D ++ +PWN P NY+ CA LSAV+V
Sbjct 51 PTSSAAPADPCAVNLASPAIVRVVSELPRDPRSQQPWNPEPLAGNYNECAQLSAVIVKAN 110
Query 135 DATNSSPDQALMFHRGTFVGTATPRAYPFTNLIGPASTNDIVVLSYRTRQSCDGCQDGIL 194
+ +A+MFH G F+ P Y FT + ST D V L+Y G G+
Sbjct 111 TNDTNPTTRAVMFHLGQFIKQGVPDTYGFTGVDESQSTGDTVALTY------SGGITGLN 164
Query 195 TIVGFAWRGDHVQILDSLP 213
++V F W G V++L + P
Sbjct 165 SLVKFRWNGSGVEVLGNTP 183
>gi|255325578|ref|ZP_05366678.1| conserved hypothetical protein [Corynebacterium tuberculostearicum
SK141]
gi|255297366|gb|EET76683.1| conserved hypothetical protein [Corynebacterium tuberculostearicum
SK141]
Length=233
Score = 82.0 bits (201), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 50/132 (38%), Positives = 72/132 (55%), Gaps = 4/132 (3%)
Query 71 SAPARPTSPASQVGPCGPDEATAVRAALAQLAPDSKTGRPWNSTPEDSNYDPCADLSAVL 130
SAP+R ++ +A A+AQ+ P RPW P DSN+DPCADLS +
Sbjct 88 SAPSRGQGNGGSSECSSDNDESAYEKAIAQVEPYPGLDRPWR--PFDSNFDPCADLSWIT 145
Query 131 VTVQDATNSSPDQALMFHRGTFVGTATPRAYPFTNLIGPASTNDIVVLSYRTRQSCDGCQ 190
VT++ AT SSP L+FH G ++GTAT +AY F+ + ++I V +YR + +G
Sbjct 146 VTLEGATASSPYHILLFHNGEYLGTATAKAYGFSPKVSRVDDSEIAV-TYRWPKEGEGNA 204
Query 191 DGI-LTIVGFAW 201
+ T GF W
Sbjct 205 EASGTTQAGFRW 216
>gi|333989859|ref|YP_004522473.1| hypothetical protein JDM601_1219 [Mycobacterium sp. JDM601]
gi|333485827|gb|AEF35219.1| lipoprotein LprE [Mycobacterium sp. JDM601]
Length=186
Score = 82.0 bits (201), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/155 (36%), Positives = 76/155 (50%), Gaps = 10/155 (6%)
Query 56 HRVRPGANQAAPATTSAPARPTSPASQVGPCGPDEAT-AVRAALAQLAPDSKTGRPWNST 114
P A A P TTS PA +PA PC D A A+ A+++L D ++G+PW+
Sbjct 36 QNTSPTATAAPPVTTSTPAGSPAPAD---PCAVDLAAPAIAKAVSELPKDPRSGQPWSPE 92
Query 115 PEDSNYDPCADLSAVLVTVQDATNSSPDQALMFHRGTFVGTATPRAYPFTNLIGPASTND 174
P NY CADLSAV+V +A++FHRG F+ + P Y F + T D
Sbjct 93 PLAGNYSECADLSAVIVKANTNAEKPSTRAVLFHRGAFLPQSVPDTYGFNGIDLAHCTTD 152
Query 175 IVVLSYRTRQSCDGCQDGILTIVGFAWRGDHVQIL 209
V L Q+ G G+ +V F W G V+I+
Sbjct 153 TVAL-----QNASGIA-GLTGLVKFHWNGAGVEII 181
>gi|108800932|ref|YP_641129.1| protein LprE [Mycobacterium sp. MCS]
gi|119870072|ref|YP_940024.1| protein LprE [Mycobacterium sp. KMS]
gi|126436557|ref|YP_001072248.1| protein LprE [Mycobacterium sp. JLS]
gi|108771351|gb|ABG10073.1| LprE [Mycobacterium sp. MCS]
gi|119696161|gb|ABL93234.1| LprE [Mycobacterium sp. KMS]
gi|126236357|gb|ABN99757.1| LprE [Mycobacterium sp. JLS]
Length=180
Score = 75.9 bits (185), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/185 (32%), Positives = 87/185 (48%), Gaps = 22/185 (11%)
Query 42 LACVAAAVVAYAGMHRVRPGANQAAPATTSAPARPTSPAS-----QVGP---CGPDEATA 93
+A AA+ A G ++ AT +PA PT+PA+ VGP GP + A
Sbjct 1 MAVGTAALSALVGCSSGDSTVSKTPEATGPSPA-PTAPATPSIAPTVGPPPAAGPSDPCA 59
Query 94 VRAALAQLAP-------DSKTGRPWNSTPEDSNYDPCADLSAVLVTVQDATNSSPDQALM 146
V A ++A D ++ + W+ P NY+ CA LSAV+V + +A+M
Sbjct 60 VNLAAPEIAKAVSSLPRDPRSNQAWSPEPVAGNYNECAQLSAVIVRANTNAENPNTRAVM 119
Query 147 FHRGTFVGTATPRAYPFTNLIGPASTNDIVVLSYRTRQSCDGCQDGILTIVGFAWRGDHV 206
FH G F+ T P Y F L +T D V L Y G DG+ +IV F W G+ V
Sbjct 120 FHLGKFIPTGVPDTYGFNGLDPAGTTGDTVALRY------SGEVDGLASIVRFRWNGNGV 173
Query 207 QILDS 211
+++ +
Sbjct 174 ELIGN 178
>gi|315443279|ref|YP_004076158.1| hypothetical protein Mspyr1_16560 [Mycobacterium sp. Spyr1]
gi|315261582|gb|ADT98323.1| hypothetical protein Mspyr1_16560 [Mycobacterium sp. Spyr1]
Length=185
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/130 (32%), Positives = 67/130 (52%), Gaps = 7/130 (5%)
Query 85 PCGPDEAT-AVRAALAQLAPDSKTGRPWNSTPEDSNYDPCADLSAVLVTVQDATNSSPDQ 143
PC D A A+ A+++L D ++G+ W+ P NY CA LSAV++ + +
Sbjct 61 PCAIDLAAPAIAQAVSELPRDPRSGQGWSPEPLAGNYSECAQLSAVIIKANTNQANPNTR 120
Query 144 ALMFHRGTFVGTATPRAYPFTNLIGPASTNDIVVLSYRTRQSCDGCQDGILTIVGFAWRG 203
A++FH+G F+ T P Y F +L +T D V L Y + G+ ++V F W G
Sbjct 121 AVLFHQGKFIPTGVPDTYGFNDLDTAQTTGDTVALKYSSGMP------GLDSVVRFRWNG 174
Query 204 DHVQILDSLP 213
V+++ + P
Sbjct 175 SGVELIGNAP 184
>gi|120405423|ref|YP_955252.1| LprE [Mycobacterium vanbaalenii PYR-1]
gi|119958241|gb|ABM15246.1| LprE [Mycobacterium vanbaalenii PYR-1]
Length=187
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/126 (34%), Positives = 64/126 (51%), Gaps = 7/126 (5%)
Query 85 PCGPDEAT-AVRAALAQLAPDSKTGRPWNSTPEDSNYDPCADLSAVLVTVQDATNSSPDQ 143
PC D A + A+++L D ++ + WN P NY+ CA LSAV+V + + +
Sbjct 63 PCDIDLAAPEIARAVSELPRDPRSNQGWNPEPLAGNYNECAQLSAVIVKANTNSENPNTR 122
Query 144 ALMFHRGTFVGTATPRAYPFTNLIGPASTNDIVVLSYRTRQSCDGCQDGILTIVGFAWRG 203
A++FH+G F+ T P Y F L +T D V L Y G G+ +IV F W G
Sbjct 123 AVLFHQGKFIPTGVPDTYGFNGLDSTQTTGDTVALKY------SGGVPGLDSIVKFRWNG 176
Query 204 DHVQIL 209
V+++
Sbjct 177 SGVELI 182
>gi|145222812|ref|YP_001133490.1| LprE [Mycobacterium gilvum PYR-GCK]
gi|145215298|gb|ABP44702.1| LprE [Mycobacterium gilvum PYR-GCK]
Length=195
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/130 (32%), Positives = 65/130 (50%), Gaps = 7/130 (5%)
Query 85 PCGPDEAT-AVRAALAQLAPDSKTGRPWNSTPEDSNYDPCADLSAVLVTVQDATNSSPDQ 143
PC D A + A+++L D ++G+ WN P NY CA LSAV++ + +
Sbjct 71 PCAIDLAAPEIAQAVSELPRDPRSGQGWNPEPLAGNYSECAQLSAVIIKANTNQPNPNTR 130
Query 144 ALMFHRGTFVGTATPRAYPFTNLIGPASTNDIVVLSYRTRQSCDGCQDGILTIVGFAWRG 203
A++FH+G F+ T P Y F L +T D V L Y + G+ ++V F W G
Sbjct 131 AVLFHQGKFIPTGVPDTYGFNGLDTTQTTGDTVALKYSSGMP------GLDSVVRFRWNG 184
Query 204 DHVQILDSLP 213
V+++ + P
Sbjct 185 SGVELIGNTP 194
>gi|118473892|ref|YP_889293.1| LprE protein [Mycobacterium smegmatis str. MC2 155]
gi|118175179|gb|ABK76075.1| LprE protein [Mycobacterium smegmatis str. MC2 155]
Length=179
Score = 72.4 bits (176), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/149 (33%), Positives = 75/149 (51%), Gaps = 9/149 (6%)
Query 65 AAPATTSAPARPTSPASQVGPCGPDEAT-AVRAALAQLAPDSKTGRPWNSTPEDSNYDPC 123
AAP TT A PTS ++ PC + A + A+++L D ++ + W+ P NY+ C
Sbjct 38 AAPETTVAAPAPTS--AEPDPCTVNLAAPEIARAVSELPRDPRSNQAWSPEPIAGNYNEC 95
Query 124 ADLSAVLVTVQDATNSSPDQALMFHRGTFVGTATPRAYPFTNLIGPASTNDIVVLSYRTR 183
A LSAV+V + +A++FH G F+ T P Y F ++ ST D V L Y
Sbjct 96 AQLSAVIVRANTNAENPNTRAVLFHLGKFIPTGVPDTYGFNDIDKTQSTGDTVALQY--- 152
Query 184 QSCDGCQDGILTIVGFAWRGDHVQILDSL 212
G G+ + V F W G V+++ ++
Sbjct 153 ---SGGFHGLPSTVRFRWNGSGVELMGNV 178
>gi|15827542|ref|NP_301805.1| lipoprotein [Mycobacterium leprae TN]
gi|221230019|ref|YP_002503435.1| putative lipoprotein [Mycobacterium leprae Br4923]
gi|17433138|sp|Q9CC94.1|LPRE_MYCLE RecName: Full=Putative lipoprotein lprE; Flags: Precursor
gi|13093092|emb|CAC31480.1| putative lipoprotein [Mycobacterium leprae]
gi|219933126|emb|CAR71194.1| putative lipoprotein [Mycobacterium leprae Br4923]
Length=202
Score = 72.0 bits (175), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 45/147 (31%), Positives = 74/147 (51%), Gaps = 9/147 (6%)
Query 67 PATTSAPARPTSPASQVGPCGPDEAT-AVRAALAQLAPDSKTGRPWNSTPEDSNYDPCAD 125
P T+AP PTS PC + A+ + +++L D ++ +PWN P NY+ CA
Sbjct 61 PFATAAP--PTSNTPPDDPCAVNLASPTIARVVSELPRDPRSAQPWNPEPLAGNYNECAQ 118
Query 126 LSAVLVTVQDATNSSPDQALMFHRGTFVGTATPRAYPFTNLIGPASTNDIVVLSYRTRQS 185
LSAV++ + +A++FH G F+ P Y F + +T D V L+Y +
Sbjct 119 LSAVIIKANTNAVNPTTRAVLFHLGRFIPQGVPDTYGFNGIDPAQTTGDTVALTYPSS-- 176
Query 186 CDGCQDGILTIVGFAWRGDHVQILDSL 212
DG+ T V F W G+ V+++ ++
Sbjct 177 ----IDGLATAVRFHWNGNAVELISNI 199
>gi|254819462|ref|ZP_05224463.1| LprE [Mycobacterium intracellulare ATCC 13950]
Length=139
Score = 71.2 bits (173), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 45/142 (32%), Positives = 69/142 (49%), Gaps = 13/142 (9%)
Query 79 PASQVGPCGPDEATAVRAA-------LAQLAPDSKTGRPWNSTPEDSNYDPCADLSAVLV 131
PA+Q G P + AV A +++L D ++ +PWN P NY+ CA LSAV++
Sbjct 2 PAAQPGNAPPADPCAVNLASPTIAKVVSELPRDPRSQQPWNPEPLAGNYNQCAQLSAVII 61
Query 132 TVQDATNSSPDQALMFHRGTFVGTATPRAYPFTNLIGPASTNDIVVLSYRTRQSCDGCQD 191
S +A++FH G F+ P Y F + +T D V L+Y G
Sbjct 62 KANTNAVSPTTRAVLFHLGQFIPQGVPDTYGFNGIDPAQTTGDTVALTY------PGGIQ 115
Query 192 GILTIVGFAWRGDHVQILDSLP 213
G+ T V F W G+ V+++ + P
Sbjct 116 GLNTHVKFHWNGNAVELIGNTP 137
>gi|227542788|ref|ZP_03972837.1| conserved hypothetical protein [Corynebacterium glucuronolyticum
ATCC 51866]
gi|227181414|gb|EEI62386.1| conserved hypothetical protein [Corynebacterium glucuronolyticum
ATCC 51866]
Length=206
Score = 71.2 bits (173), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 47/116 (41%), Positives = 66/116 (57%), Gaps = 16/116 (13%)
Query 69 TTSAPARPTSPASQVGPCG-PDEATAVRAALAQLAPDSKTGRPWN---STPEDSNYDPCA 124
T ++PARP S CG D AVRA + ++ P + WN S+ S YDPCA
Sbjct 65 TQASPARPES-------CGYADAYAAVRAHIDEVRPAT-----WNWDVSSAIVSGYDPCA 112
Query 125 DLSAVLVTVQDATNSSPDQALMFHRGTFVGTATPRAYPFTNLIGPASTNDIVVLSY 180
DLS +VT+ AT +SP+Q ++FHRG ++GTAT AY F + S + I V+ +
Sbjct 113 DLSWAIVTIPGATGASPNQIMLFHRGEYLGTATLDAYAFVPTVTRTSDSSIAVIYH 168
>gi|41408620|ref|NP_961456.1| LprE [Mycobacterium avium subsp. paratuberculosis K-10]
gi|41396978|gb|AAS04839.1| LprE [Mycobacterium avium subsp. paratuberculosis K-10]
gi|336458593|gb|EGO37560.1| hypothetical protein MAPs_11830 [Mycobacterium avium subsp. paratuberculosis
S397]
Length=202
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/130 (32%), Positives = 64/130 (50%), Gaps = 7/130 (5%)
Query 85 PCGPDEAT-AVRAALAQLAPDSKTGRPWNSTPEDSNYDPCADLSAVLVTVQDATNSSPDQ 143
PC + A + +++L D ++ +PWN P NY+ CA LSAV+V S +
Sbjct 77 PCAVNLAAPTIAKVVSELPRDPRSQQPWNPEPLAGNYNQCAQLSAVIVKANTNAISPSTR 136
Query 144 ALMFHRGTFVGTATPRAYPFTNLIGPASTNDIVVLSYRTRQSCDGCQDGILTIVGFAWRG 203
A++FH G F+ P Y F + +T D V L+Y G G+ T V F W G
Sbjct 137 AVLFHLGQFIPQGVPDTYGFNGIDPAQTTGDTVALTY------PGGLSGLSTDVKFHWNG 190
Query 204 DHVQILDSLP 213
+ V+++ + P
Sbjct 191 NAVELIGNTP 200
>gi|118464232|ref|YP_880642.1| LprE protein [Mycobacterium avium 104]
gi|118165519|gb|ABK66416.1| LprE protein [Mycobacterium avium 104]
Length=195
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/130 (32%), Positives = 64/130 (50%), Gaps = 7/130 (5%)
Query 85 PCGPDEAT-AVRAALAQLAPDSKTGRPWNSTPEDSNYDPCADLSAVLVTVQDATNSSPDQ 143
PC + A + +++L D ++ +PWN P NY+ CA LSAV+V S +
Sbjct 70 PCAVNLAAPTIVKVVSELPRDPRSQQPWNPEPLAGNYNQCAQLSAVIVKANTNAISPSTR 129
Query 144 ALMFHRGTFVGTATPRAYPFTNLIGPASTNDIVVLSYRTRQSCDGCQDGILTIVGFAWRG 203
A++FH G F+ P Y F + +T D V L+Y G G+ T V F W G
Sbjct 130 AVLFHLGQFIPQGVPDTYGFNGIDPAQTTGDTVALTY------PGGLSGLSTDVKFHWNG 183
Query 204 DHVQILDSLP 213
+ V+++ + P
Sbjct 184 NAVELIGNTP 193
>gi|254774279|ref|ZP_05215795.1| LprE protein [Mycobacterium avium subsp. avium ATCC 25291]
Length=195
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/130 (32%), Positives = 64/130 (50%), Gaps = 7/130 (5%)
Query 85 PCGPDEAT-AVRAALAQLAPDSKTGRPWNSTPEDSNYDPCADLSAVLVTVQDATNSSPDQ 143
PC + A + +++L D ++ +PWN P NY+ CA LSAV+V S +
Sbjct 70 PCAVNLAAPTIVKVVSELPRDPRSQQPWNPEPLAGNYNQCAQLSAVIVKANTNAISPSTR 129
Query 144 ALMFHRGTFVGTATPRAYPFTNLIGPASTNDIVVLSYRTRQSCDGCQDGILTIVGFAWRG 203
A++FH G F+ P Y F + +T D V L+Y G G+ T V F W G
Sbjct 130 AVLFHLGQFIPQGVPDTYGFNGIDPAQTTGDTVALTY------PGGLSGLSTDVKFHWNG 183
Query 204 DHVQILDSLP 213
+ V+++ + P
Sbjct 184 NAVELIGNTP 193
>gi|183984162|ref|YP_001852453.1| lipoprotein LprE [Mycobacterium marinum M]
gi|183177488|gb|ACC42598.1| lipoprotein LprE [Mycobacterium marinum M]
Length=198
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/118 (30%), Positives = 62/118 (53%), Gaps = 6/118 (5%)
Query 94 VRAALAQLAPDSKTGRPWNSTPEDSNYDPCADLSAVLVTVQDATNSSPDQALMFHRGTFV 153
+ +++L D ++ +PWN P NY+ CA LSAV++ ++ +A++FH+G F+
Sbjct 84 IAKVVSELPRDPRSEQPWNPEPLAGNYNECAQLSAVVIRANTNGDNPTTRAVLFHQGKFI 143
Query 154 GTATPRAYPFTNLIGPASTNDIVVLSYRTRQSCDGCQDGILTIVGFAWRGDHVQILDS 211
P Y F + T D V L+Y T S G+ ++V F W G+ V+++ +
Sbjct 144 PQGVPDTYGFNGIDTSQCTGDTVALTYATGIS------GLGSVVKFRWNGNGVELISN 195
>gi|118619600|ref|YP_907932.1| lipoprotein LprE [Mycobacterium ulcerans Agy99]
gi|118571710|gb|ABL06461.1| lipoprotein LprE [Mycobacterium ulcerans Agy99]
Length=198
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/118 (30%), Positives = 62/118 (53%), Gaps = 6/118 (5%)
Query 94 VRAALAQLAPDSKTGRPWNSTPEDSNYDPCADLSAVLVTVQDATNSSPDQALMFHRGTFV 153
+ +++L D ++ +PWN P NY+ CA LSAV++ ++ +A++FH+G F+
Sbjct 84 IAKVVSELPRDPRSEQPWNPEPLAGNYNECAQLSAVVIRANTNGDNPTTRAVLFHQGKFI 143
Query 154 GTATPRAYPFTNLIGPASTNDIVVLSYRTRQSCDGCQDGILTIVGFAWRGDHVQILDS 211
P Y F + T D V L+Y T S G+ ++V F W G+ V+++ +
Sbjct 144 PQGVPDTYGFNGIDTSQCTGDTVALTYATGIS------GLGSVVKFRWNGNGVELISN 195
>gi|15608392|ref|NP_215768.1| lipoprotein LprE [Mycobacterium tuberculosis H37Rv]
gi|15840698|ref|NP_335735.1| hypothetical protein MT1291 [Mycobacterium tuberculosis CDC1551]
gi|31792445|ref|NP_854938.1| lipoprotein LprE [Mycobacterium bovis AF2122/97]
72 more sequence titles
Length=202
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/133 (30%), Positives = 66/133 (50%), Gaps = 8/133 (6%)
Query 80 ASQVGPCGPDEAT-AVRAALAQLAPDSKTGRPWNSTPEDSNYDPCADLSAVLVTVQDATN 138
A+ V PC + A+ + +++L D ++ +PWN P NY+ CA LSAV++
Sbjct 73 AAPVDPCAVNLASPTIAKVVSELPRDPRSEQPWNPEPLAGNYNECAQLSAVVIKANTNAG 132
Query 139 SSPDQALMFHRGTFVGTATPRAYPFTNLIGPASTNDIVVLSYRTRQSCDGCQDGILTIVG 198
+ +A+MFH G ++ P Y FT + T D V L+Y + G+ +V
Sbjct 133 NPTTRAVMFHLGKYIPQGVPDTYGFTGIDTSQCTGDTVALTYAS-------GIGLNNVVK 185
Query 199 FAWRGDHVQILDS 211
F W G V+++ +
Sbjct 186 FRWNGGGVELIGN 198
>gi|340626265|ref|YP_004744717.1| putative lipoprotein LPRE [Mycobacterium canettii CIPT 140010059]
gi|340004455|emb|CCC43598.1| putative lipoprotein LPRE [Mycobacterium canettii CIPT 140010059]
Length=202
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/130 (30%), Positives = 64/130 (50%), Gaps = 8/130 (6%)
Query 83 VGPCGPDEAT-AVRAALAQLAPDSKTGRPWNSTPEDSNYDPCADLSAVLVTVQDATNSSP 141
V PC + A+ + +++L D ++ +PWN P NY+ CA LSAV++ +
Sbjct 76 VDPCAVNLASPTIAKVVSELPRDPRSEQPWNPEPLAGNYNECAQLSAVVIKANTNAGNPT 135
Query 142 DQALMFHRGTFVGTATPRAYPFTNLIGPASTNDIVVLSYRTRQSCDGCQDGILTIVGFAW 201
+A+MFH G ++ P Y FT + T D V L+Y + G+ +V F W
Sbjct 136 TRAVMFHLGKYIPQGVPDTYGFTGIDTSQCTGDTVALTYAS-------GIGLNNVVKFRW 188
Query 202 RGDHVQILDS 211
G V+++ +
Sbjct 189 NGGGVELIGN 198
>gi|297633801|ref|ZP_06951581.1| lipoprotein lprE [Mycobacterium tuberculosis KZN 4207]
Length=186
Score = 69.3 bits (168), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/133 (30%), Positives = 66/133 (50%), Gaps = 8/133 (6%)
Query 80 ASQVGPCGPDEAT-AVRAALAQLAPDSKTGRPWNSTPEDSNYDPCADLSAVLVTVQDATN 138
A+ V PC + A+ + +++L D ++ +PWN P NY+ CA LSAV++
Sbjct 57 AAPVDPCAVNLASPTIAKVVSELPRDPRSEQPWNPEPLAGNYNECAQLSAVVIKANTNAG 116
Query 139 SSPDQALMFHRGTFVGTATPRAYPFTNLIGPASTNDIVVLSYRTRQSCDGCQDGILTIVG 198
+ +A+MFH G ++ P Y FT + T D V L+Y + G+ +V
Sbjct 117 NPTTRAVMFHLGKYIPQGVPDTYGFTGIDTSQCTGDTVALTYAS-------GIGLNNVVK 169
Query 199 FAWRGDHVQILDS 211
F W G V+++ +
Sbjct 170 FRWNGGGVELIGN 182
>gi|296170154|ref|ZP_06851751.1| LprE protein [Mycobacterium parascrofulaceum ATCC BAA-614]
gi|295895180|gb|EFG74895.1| LprE protein [Mycobacterium parascrofulaceum ATCC BAA-614]
Length=199
Score = 69.3 bits (168), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/150 (32%), Positives = 77/150 (52%), Gaps = 9/150 (6%)
Query 65 AAPATTSAPARPTSPASQVGPCGPDEATAVRAAL-AQLAPDSKTGRPWNSTPEDSNYDPC 123
A P+ +AP P S A+ PC + A+ V A + ++L D ++ +PW+ P NY+ C
Sbjct 56 AQPSGAAAP--PGSVAAPADPCAVNLASPVIAKVVSELPRDPRSQQPWSPEPLAGNYNQC 113
Query 124 ADLSAVLVTVQDATNSSPDQALMFHRGTFVGTATPRAYPFTNLIGPASTNDIVVLSYRTR 183
A LSAV+V + +A++FH G F+ P Y F + +T D V L+Y +
Sbjct 114 AQLSAVIVKANTNAANPTTRAVLFHLGQFIPQGVPDTYGFNGVDPAQTTGDTVALTYPSG 173
Query 184 QSCDGCQDGILTIVGFAWRGDHVQILDSLP 213
+G+ T V F W G+ V+++ + P
Sbjct 174 ------INGLNTDVRFHWNGNGVELIGNAP 197
>gi|308375415|ref|ZP_07443807.2| lipoprotein lprE [Mycobacterium tuberculosis SUMu007]
gi|308346382|gb|EFP35233.1| lipoprotein lprE [Mycobacterium tuberculosis SUMu007]
Length=202
Score = 69.3 bits (168), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/133 (30%), Positives = 65/133 (49%), Gaps = 8/133 (6%)
Query 80 ASQVGPCGPDEAT-AVRAALAQLAPDSKTGRPWNSTPEDSNYDPCADLSAVLVTVQDATN 138
A+ V PC + A+ + +++L D ++ +PWN P NY+ CA LSAV++
Sbjct 73 AAPVDPCAVNLASPTIAKVVSELPRDPRSEQPWNPEPLAGNYNECAQLSAVVIKANTNAG 132
Query 139 SSPDQALMFHRGTFVGTATPRAYPFTNLIGPASTNDIVVLSYRTRQSCDGCQDGILTIVG 198
+ +A+MFH G ++ P Y FT + T D V L Y + G+ +V
Sbjct 133 NPTTRAVMFHLGKYIPQGVPDTYGFTGIDTSQCTGDTVALMYAS-------GIGLNNVVK 185
Query 199 FAWRGDHVQILDS 211
F W G V+++ +
Sbjct 186 FRWNGGGVELIGN 198
>gi|289753323|ref|ZP_06512701.1| lipoprotein lprE [Mycobacterium tuberculosis EAS054]
gi|289693910|gb|EFD61339.1| lipoprotein lprE [Mycobacterium tuberculosis EAS054]
Length=133
Score = 68.9 bits (167), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/133 (30%), Positives = 66/133 (50%), Gaps = 8/133 (6%)
Query 80 ASQVGPCGPDEAT-AVRAALAQLAPDSKTGRPWNSTPEDSNYDPCADLSAVLVTVQDATN 138
A+ V PC + A+ + +++L D ++ +PWN P NY+ CA LSAV++
Sbjct 4 AAPVDPCAVNLASPTIAKVVSELPRDPRSEQPWNPEPLAGNYNECAQLSAVVIKANTNAG 63
Query 139 SSPDQALMFHRGTFVGTATPRAYPFTNLIGPASTNDIVVLSYRTRQSCDGCQDGILTIVG 198
+ +A+MFH G ++ P Y FT + T D V L+Y + G+ +V
Sbjct 64 NPTTRAVMFHLGKYIPQGVPDTYGFTGIDTSQCTGDTVALTYAS-------GIGLNNVVK 116
Query 199 FAWRGDHVQILDS 211
F W G V+++ +
Sbjct 117 FRWNGGGVELIGN 129
>gi|342862129|ref|ZP_08718772.1| LprE [Mycobacterium colombiense CECT 3035]
gi|342130433|gb|EGT83748.1| LprE [Mycobacterium colombiense CECT 3035]
Length=193
Score = 68.9 bits (167), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/130 (30%), Positives = 66/130 (51%), Gaps = 7/130 (5%)
Query 85 PCGPDEAT-AVRAALAQLAPDSKTGRPWNSTPEDSNYDPCADLSAVLVTVQDATNSSPDQ 143
PC + A+ + +++L D ++ +PWN P NY+ CA LSA+++ + +
Sbjct 68 PCAVNLASPTIAKVVSELPRDPRSQQPWNPEPLAGNYNQCAQLSAIIIKANTNAVAPTTR 127
Query 144 ALMFHRGTFVGTATPRAYPFTNLIGPASTNDIVVLSYRTRQSCDGCQDGILTIVGFAWRG 203
A++FH G F+ P Y F + +T D V L+Y G +G+ T V F W G
Sbjct 128 AVLFHLGQFIPQGVPDTYGFNGVDPAQTTGDTVALTY------PGGINGLNTDVKFHWNG 181
Query 204 DHVQILDSLP 213
+ V+++ + P
Sbjct 182 NAVELIGNTP 191
>gi|227505858|ref|ZP_03935907.1| conserved hypothetical protein [Corynebacterium striatum ATCC
6940]
gi|227197556|gb|EEI77604.1| conserved hypothetical protein [Corynebacterium striatum ATCC
6940]
Length=211
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/147 (31%), Positives = 71/147 (49%), Gaps = 8/147 (5%)
Query 71 SAPARPTSPASQVGPCGPDEATAVRAALAQLAPDSKTGR--PWNSTP----EDSNYDPCA 124
+A A PT PA P ++A + A A +S G PWN + S +DPCA
Sbjct 60 AAGASPTLPAES--PAEEEDAESCETIDAHAAYESGIGTIPPWNDNNWTLVDFSQFDPCA 117
Query 125 DLSAVLVTVQDATNSSPDQALMFHRGTFVGTATPRAYPFTNLIGPASTNDIVVLSYRTRQ 184
+LS ++++ T+SSP ++FH+G ++GTAT Y F + S+N+I V + R+
Sbjct 118 ELSWQTISIERGTSSSPYHIMLFHKGEYLGTATAEPYGFFPTVEQVSSNEIAVTYHWPRE 177
Query 185 SCDGCQDGILTIVGFAWRGDHVQILDS 211
T GF W +++ S
Sbjct 178 GESNAGHTGETHAGFRWDDGQQKVIMS 204
>gi|227834152|ref|YP_002835859.1| putative secreted protein [Corynebacterium aurimucosum ATCC 700975]
gi|262183360|ref|ZP_06042781.1| putative secreted protein [Corynebacterium aurimucosum ATCC 700975]
gi|227455168|gb|ACP33921.1| putative secreted protein [Corynebacterium aurimucosum ATCC 700975]
Length=203
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/104 (33%), Positives = 52/104 (50%), Gaps = 4/104 (3%)
Query 110 PWNS----TPEDSNYDPCADLSAVLVTVQDATNSSPDQALMFHRGTFVGTATPRAYPFTN 165
PWN P S +DPCADLS +++ ++ AT SSP ++FH+G ++GTAT Y F
Sbjct 92 PWNGFGWGRPSSSEFDPCADLSWLIIAIEGATASSPHHIMLFHKGEYLGTATAEPYGFFP 151
Query 166 LIGPASTNDIVVLSYRTRQSCDGCQDGILTIVGFAWRGDHVQIL 209
I + +I V + R+ T GF W +++
Sbjct 152 TIERVNDAEIAVTYHWAREGETTAGRTGETHAGFRWDEGQQKVI 195
>gi|339294234|gb|AEJ46345.1| lipoprotein lprE [Mycobacterium tuberculosis CCDC5079]
gi|339297874|gb|AEJ49984.1| lipoprotein lprE [Mycobacterium tuberculosis CCDC5180]
Length=122
Score = 65.9 bits (159), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/118 (29%), Positives = 58/118 (50%), Gaps = 7/118 (5%)
Query 94 VRAALAQLAPDSKTGRPWNSTPEDSNYDPCADLSAVLVTVQDATNSSPDQALMFHRGTFV 153
+ +++L D ++ +PWN P NY+ CA LSAV++ + +A+MFH G ++
Sbjct 8 IAKVVSELPRDPRSEQPWNPEPLAGNYNECAQLSAVVIKANTNAGNPTTRAVMFHLGKYI 67
Query 154 GTATPRAYPFTNLIGPASTNDIVVLSYRTRQSCDGCQDGILTIVGFAWRGDHVQILDS 211
P Y FT + T D V L+Y + G+ +V F W G V+++ +
Sbjct 68 PQGVPDTYGFTGIDTSQCTGDTVALTYAS-------GIGLNNVVKFRWNGGGVELIGN 118
>gi|172041207|ref|YP_001800921.1| hypothetical protein cur_1527 [Corynebacterium urealyticum DSM
7109]
gi|171852511|emb|CAQ05487.1| hypothetical protein cu1527 [Corynebacterium urealyticum DSM
7109]
Length=170
Score = 65.5 bits (158), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/126 (32%), Positives = 66/126 (53%), Gaps = 5/126 (3%)
Query 59 RPGANQAAPATTSAPARPTSPASQVGPCGPDEATAVRAALAQLAPDSKTGRPWNSTPEDS 118
+P + +PA S P + P Q G +EA +R + +LA T WN++ +
Sbjct 14 KPEPTRKSPAQESEPGK--KPDKQCGDLPAEEA--LRQNVGKLASPKGTDWTWNTSYAGT 69
Query 119 N-YDPCADLSAVLVTVQDATNSSPDQALMFHRGTFVGTATPRAYPFTNLIGPASTNDIVV 177
+ YDPCADLS +++T+ AT SSP ++FH+G ++GTAT F+ + + V
Sbjct 70 DLYDPCADLSPIVLTIDGATGSSPYHIMLFHKGEYLGTATAEPQGFSPDVKQVDGKTLAV 129
Query 178 LSYRTR 183
+ T+
Sbjct 130 TYFYTK 135
>gi|255325577|ref|ZP_05366677.1| conserved hypothetical protein [Corynebacterium tuberculostearicum
SK141]
gi|255297365|gb|EET76682.1| conserved hypothetical protein [Corynebacterium tuberculostearicum
SK141]
Length=181
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/138 (31%), Positives = 65/138 (48%), Gaps = 4/138 (2%)
Query 75 RPTSPASQVGPCGP-DEATAVRAALAQLAPDSKTGRPWNSTPEDSNYDPCADLSAVLVTV 133
+P+ A CG D TA ++Q+AP G W + S YDPCA LS + +
Sbjct 40 QPSPEADTTSSCGAADAQTAFSEGISQVAPWGTIG--WE-LFDSSGYDPCASLSWETLMI 96
Query 134 QDATNSSPDQALMFHRGTFVGTATPRAYPFTNLIGPASTNDIVVLSYRTRQSCDGCQDGI 193
+ T+SSP ++F+ G ++GTAT + Y F I S ++I V + R+
Sbjct 97 EGGTSSSPFHIMLFNHGEYLGTATAKPYGFAPTIERVSDSEIAVTYHWPREGEGNANRSG 156
Query 194 LTIVGFAWRGDHVQILDS 211
T GF W +++ S
Sbjct 157 TTDAGFRWDEGQQKVIMS 174
>gi|336324639|ref|YP_004604605.1| hypothetical protein CRES_0078 [Corynebacterium resistens DSM
45100]
gi|336100621|gb|AEI08441.1| putative secreted protein [Corynebacterium resistens DSM 45100]
Length=223
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/97 (41%), Positives = 55/97 (57%), Gaps = 5/97 (5%)
Query 86 CGPDEAT-AVRAALAQLAPDSKTGRPWNSTPEDSN-YDPCADLSAVLVTVQDATNSSPDQ 143
CG A AVR ++Q+ P + W + D++ YDPCA LS + VT+ AT SSP Q
Sbjct 93 CGTASANQAVRENISQVKP---SHWDWTADYADTDGYDPCAALSWITVTINGATGSSPYQ 149
Query 144 ALMFHRGTFVGTATPRAYPFTNLIGPASTNDIVVLSY 180
++FH G ++GT T AY F + AS N I V+ +
Sbjct 150 IMLFHHGEYLGTGTSDAYGFMPTVTRASDNAINVVYH 186
>gi|317508262|ref|ZP_07965942.1| hypothetical protein HMPREF9336_02314 [Segniliparus rugosus ATCC
BAA-974]
gi|316253437|gb|EFV12827.1| hypothetical protein HMPREF9336_02314 [Segniliparus rugosus ATCC
BAA-974]
Length=189
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/194 (31%), Positives = 88/194 (46%), Gaps = 22/194 (11%)
Query 33 TAWLVALVVLACVAAAVVAYAGMHRVRPGANQAAPATTSAPARPTSPASQVGPC--GPDE 90
T WL+ + + A + A P + + T A R +S PC PD
Sbjct 3 TTWLLGMTTMLLTTACAPSGA------PSSEKGQGFATMASLRGGLASSSANPCPQVPD- 55
Query 91 ATAVRAALAQLAPDSKTGRPWNSTPEDSNYDPCADLSAVLVTVQDATN-SSPDQALMFHR 149
A VRAA+ L P + S YD C L+AV+V+++ + P Q L FH
Sbjct 56 APEVRAAVGSLPPPERAPAERWSQSYTGRYDRCGALTAVVVSLEGEKDPLGPRQVLFFHD 115
Query 150 GTFVGTATPRAYPFTNLIGPASTNDIVVLSYRTRQSCDGCQDGILTIVGFA-----WRGD 204
G FVGTA P A+ T + ++ D VV+ YR + Q+ + T+ G A W GD
Sbjct 116 GGFVGTADPCAFGPTEV--KSARGDTVVVQYRWPRG----QETVTTMTGLANIKYHWIGD 169
Query 205 HVQILDSLPE-LFD 217
V ++ +P+ L+D
Sbjct 170 KVVRVNQIPQALYD 183
>gi|262202208|ref|YP_003273416.1| hypothetical protein Gbro_2275 [Gordonia bronchialis DSM 43247]
gi|262085555|gb|ACY21523.1| hypothetical protein Gbro_2275 [Gordonia bronchialis DSM 43247]
Length=221
Score = 61.6 bits (148), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 51/164 (32%), Positives = 79/164 (49%), Gaps = 12/164 (7%)
Query 59 RPGANQAA-PATTSAPAR----PTSPASQVGPCGPDEATAVRAALAQLA---PDSKTGRP 110
RP + + + P TT+A T+ AS C + A+ +A A++A P + P
Sbjct 53 RPTSTEGSQPGTTTASGTDSPAATTDASPHANCSTESTEAIASATARIAGPLPTTNPDVP 112
Query 111 WNSTPEDSNYDPCADLSAVLVTVQDATNSSPDQALMFHRGTFVGTATPRAYPFTNLIGPA 170
W +NY+ C DLS + Q AT SSP+Q L+FHRG FVGT + + G
Sbjct 113 W-VFGGATNYNTCNDLSYATLDTQGATASSPNQLLLFHRGVFVGTGVRCNLAYQRVTG-- 169
Query 171 STNDIVVLSYRTRQSCDGCQDGILTI-VGFAWRGDHVQILDSLP 213
++ + V ++YR + D ++ V F W G V + +LP
Sbjct 170 ASTEAVYVNYRYLRGDDASAAPSGSVDVSFEWNGSRVVLSGTLP 213
>gi|169628493|ref|YP_001702142.1| putative lipoprotein LprE [Mycobacterium abscessus ATCC 19977]
gi|169240460|emb|CAM61488.1| Putative lipoprotein LprE precursor [Mycobacterium abscessus]
Length=190
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/136 (31%), Positives = 62/136 (46%), Gaps = 6/136 (4%)
Query 72 APARPTSPASQVGPCGPDEATAVRAALAQLAPDSKTGRPWNSTPEDSNYDPCADLSAVLV 131
AP +P P+++ + AV +A+A L P WN P NY+ CA LSA++V
Sbjct 54 APVKPKLPSTKDDCAVNLKDPAVASAIALLPPAPNNEATWNPVPVAGNYNKCAPLSAIIV 113
Query 132 TVQDATNSSPDQALMFHRGTFVGTATPRAYPFTNLIGPASTNDIVVLSYRTRQSCDGCQD 191
P +A+ FH G + P Y + + AST D VVL++
Sbjct 114 AADTHEPQPPTRAVFFHLGGVISHGVPDTYGYNAIDLSASTLDTVVLNFSNGIP------ 167
Query 192 GILTIVGFAWRGDHVQ 207
G+ ++V F W G V+
Sbjct 168 GLESVVSFRWNGTGVE 183
>gi|340795076|ref|YP_004760539.1| hypothetical protein CVAR_2116 [Corynebacterium variabile DSM
44702]
gi|340534986|gb|AEK37466.1| putative secreted protein [Corynebacterium variabile DSM 44702]
Length=207
Score = 58.2 bits (139), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 27/62 (44%), Positives = 39/62 (63%), Gaps = 1/62 (1%)
Query 103 PDSKTGRPWN-STPEDSNYDPCADLSAVLVTVQDATNSSPDQALMFHRGTFVGTATPRAY 161
P + G PW + E YDPCADLS +++ ++ T SSP Q ++FH G+++GTAT Y
Sbjct 92 PPNSGGYPWAPESAETDGYDPCADLSWIILPIEGGTASSPYQIMLFHNGSYLGTATSDDY 151
Query 162 PF 163
F
Sbjct 152 GF 153
>gi|311740443|ref|ZP_07714271.1| conserved hypothetical protein [Corynebacterium pseudogenitalium
ATCC 33035]
gi|311304489|gb|EFQ80564.1| conserved hypothetical protein [Corynebacterium pseudogenitalium
ATCC 33035]
Length=190
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/94 (32%), Positives = 47/94 (50%), Gaps = 0/94 (0%)
Query 118 SNYDPCADLSAVLVTVQDATNSSPDQALMFHRGTFVGTATPRAYPFTNLIGPASTNDIVV 177
S YDPCA LS + V+ ++SSP ++F+ G ++GTAT + Y F I S ++I V
Sbjct 90 SGYDPCASLSWETLMVEGGSSSSPFHIMLFNHGEYLGTATAKPYGFAPTIERVSDSEIAV 149
Query 178 LSYRTRQSCDGCQDGILTIVGFAWRGDHVQILDS 211
+ R+ T GF W +++ S
Sbjct 150 TYHWPREGEGNANRSGTTDAGFRWDETQQKVIMS 183
>gi|172041208|ref|YP_001800922.1| hypothetical protein cur_1528 [Corynebacterium urealyticum DSM
7109]
gi|171852512|emb|CAQ05488.1| hypothetical protein cu1528 [Corynebacterium urealyticum DSM
7109]
Length=122
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/76 (39%), Positives = 43/76 (57%), Gaps = 1/76 (1%)
Query 109 RPWNSTPEDSN-YDPCADLSAVLVTVQDATNSSPDQALMFHRGTFVGTATPRAYPFTNLI 167
R WN+ + YDPCADLS +++T+ AT SSP ++FHRG ++GTAT F+ +
Sbjct 12 RDWNTEFAGTGLYDPCADLSPIVLTIDMATASSPYHIMLFHRGEYLGTATAEPQGFSPAV 71
Query 168 GPASTNDIVVLSYRTR 183
I V + T+
Sbjct 72 KQVDDQTIAVTYFYTK 87
>gi|111021790|ref|YP_704762.1| hypothetical protein RHA1_ro04819 [Rhodococcus jostii RHA1]
gi|110821320|gb|ABG96604.1| conserved hypothetical protein [Rhodococcus jostii RHA1]
Length=183
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/163 (31%), Positives = 75/163 (47%), Gaps = 8/163 (4%)
Query 61 GANQAAPATTS-APARPTSPASQVGPCGPDEATAVRAALAQLAPDSKTGRPWN-STPEDS 118
G++ AA + S P ++ + G C ++ V A A L ++ G PW T D+
Sbjct 22 GSDDAAESAASPVPQAASAAEVRSGRCLDLDSALVTDAFASLG-NAPGGDPWVPGTASDA 80
Query 119 NYDPCADLSAVLVTVQDATNSSPDQALMFHRGTFVGTATPRAYPFTNLIGPASTNDIVVL 178
C L T SSP Q L FH G ++GTAT +Y +T ++ ST D V +
Sbjct 81 AGGDCPALLWATAETPMGTVSSPTQVLFFHDGAYLGTATAESYAYTRVV--ESTGDSVSV 138
Query 179 SYR--TRQSCDGCQDGILTIVGFAWRGDHVQILDSLP-ELFDA 218
YR Q + C G ++ ++W G V + LP E+ D+
Sbjct 139 QYRWLGEQDANCCPSGGPAVITYSWDGSRVVMEQPLPQEMLDS 181
>gi|296394463|ref|YP_003659347.1| hypothetical protein Srot_2060 [Segniliparus rotundus DSM 44985]
gi|296181610|gb|ADG98516.1| conserved hypothetical protein [Segniliparus rotundus DSM 44985]
Length=152
Score = 55.1 bits (131), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/107 (32%), Positives = 58/107 (55%), Gaps = 13/107 (12%)
Query 119 NYDPCADLSAVLVTVQDATN-SSPDQALMFHRGTFVGTATPRAYPFTNLIGPASTNDIVV 177
YD C +L+A +V ++ T+ P Q L FH+G FVGTA A+ ++ ++ D V+
Sbjct 47 RYDHCGELTAAVVALEGDTDPLGPRQVLFFHKGAFVGTADSCAFGRASV--KSARGDTVL 104
Query 178 LSYRTRQSCDGCQDGILTIVG-----FAWRGDHVQILDSLP-ELFDA 218
+ YR + Q+ T+ G + W GD V+ +D +P EL+++
Sbjct 105 VQYRWPRG----QESATTMSGSANIKYRWSGDRVERIDQIPQELYES 147
>gi|227505859|ref|ZP_03935908.1| conserved hypothetical protein [Corynebacterium striatum ATCC
6940]
gi|227197557|gb|EEI77605.1| conserved hypothetical protein [Corynebacterium striatum ATCC
6940]
Length=163
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/105 (30%), Positives = 51/105 (49%), Gaps = 1/105 (0%)
Query 107 TGRPWNSTPEDSNYDPCADLSAVLVTVQDATNSSPDQALMFHRGTFVGTATPRAYPFTNL 166
G W + S++DPCA+LS ++V+ T SSP ++FH G ++GTAT Y F
Sbjct 53 NGHNWKVV-DSSHFDPCAELSWQTISVEGGTASSPRHIMLFHYGQYLGTATAEPYGFFPS 111
Query 167 IGPASTNDIVVLSYRTRQSCDGCQDGILTIVGFAWRGDHVQILDS 211
+ + N+I V + ++ T GF W +++ S
Sbjct 112 VERINGNEISVTYHWPQEGDANAAPTGETHAGFRWDEAQQKVIMS 156
>gi|312194486|ref|YP_004014547.1| hypothetical protein FraEuI1c_0599 [Frankia sp. EuI1c]
gi|311225822|gb|ADP78677.1| hypothetical protein FraEuI1c_0599 [Frankia sp. EuI1c]
Length=189
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/104 (37%), Positives = 49/104 (48%), Gaps = 5/104 (4%)
Query 114 TPED-SNYDPCADLSAVLVTVQDATNSSPDQALMFHRGTFVGTATPRAYPFTNLIGPAST 172
TP D S YDP LS ++ + + + P QA +FH G +VG A T+ + ST
Sbjct 78 TPADTSGYDPGRSLSVIIGILTGSADGHPQQAFLFHDGRYVGVDAGVASASTSWV--WST 135
Query 173 NDIVVLSYRTRQSCD--GCQDGILTIVGFAWRGDHVQILDSLPE 214
ND V L Y+ + D C G T V F W G V D LP
Sbjct 136 NDTVALQYQLYRPDDPMCCPTGGATTVRFEWLGGRVVTADPLPS 179
Lambda K H
0.315 0.131 0.417
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 273402666736
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40