BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv3486
Length=149
Score E
Sequences producing significant alignments: (Bits) Value
gi|15843098|ref|NP_338135.1| hypothetical protein MT3590 [Mycoba... 292 1e-77
gi|15610622|ref|NP_218003.1| hypothetical protein Rv3486 [Mycoba... 291 2e-77
gi|340628454|ref|YP_004746906.1| hypothetical protein MCAN_35001... 289 1e-76
gi|339296302|gb|AEJ48413.1| hypothetical protein CCDC5079_3224 [... 261 3e-68
gi|240170042|ref|ZP_04748701.1| hypothetical protein MkanA1_1206... 241 2e-62
gi|162450140|ref|YP_001612507.1| hypothetical protein sce1869 [S... 140 9e-32
gi|126434038|ref|YP_001069729.1| DoxX family protein [Mycobacter... 137 5e-31
gi|300777297|ref|ZP_07087155.1| DoxX family protein [Chryseobact... 134 4e-30
gi|146300744|ref|YP_001195335.1| DoxX family protein [Flavobacte... 129 2e-28
gi|296280700|gb|ADH04643.1| unknown [Sorangium cellulosum] 124 4e-27
gi|94968350|ref|YP_590398.1| DoxX [Candidatus Koribacter versati... 122 2e-26
gi|110636986|ref|YP_677193.1| hypothetical protein CHU_0566 [Cyt... 112 2e-23
gi|182413990|ref|YP_001819056.1| DoxX family protein [Opitutus t... 111 3e-23
gi|338535658|ref|YP_004668992.1| hypothetical protein LILAB_3016... 107 6e-22
gi|294508490|ref|YP_003572548.1| hypothetical protein SRM_02675 ... 101 4e-20
gi|83816002|ref|YP_446552.1| hypothetical protein SRU_2453 [Sali... 99.0 2e-19
gi|85715794|ref|ZP_01046773.1| hypothetical protein NB311A_13456... 88.6 3e-16
gi|85717675|ref|ZP_01048612.1| hypothetical protein NB311A_00380... 77.0 9e-13
gi|226356723|ref|YP_002786463.1| hypothetical protein Deide_1738... 64.7 4e-09
gi|317123222|ref|YP_004097334.1| DoxX family protein [Intraspora... 59.7 1e-07
gi|52784659|ref|YP_090488.1| YfiD [Bacillus licheniformis ATCC 1... 59.3 2e-07
gi|294500630|ref|YP_003564330.1| hypothetical protein BMQ_3883 [... 59.3 2e-07
gi|237785122|ref|YP_002905827.1| hypothetical protein ckrop_0510... 57.8 5e-07
gi|159896999|ref|YP_001543246.1| DoxX family protein [Herpetosip... 57.8 6e-07
gi|345022700|ref|ZP_08786313.1| hypothetical protein OTW25_15491... 57.4 6e-07
gi|310642244|ref|YP_003947002.1| doxx family protein [Paenibacil... 57.4 8e-07
gi|308069207|ref|YP_003870812.1| hypothetical protein PPE_02444 ... 57.0 9e-07
gi|284031319|ref|YP_003381250.1| DoxX family protein [Kribbella ... 56.6 1e-06
gi|337751418|ref|YP_004645580.1| YfiD [Paenibacillus mucilaginos... 56.6 1e-06
gi|338732547|ref|YP_004671020.1| DoxX [Simkania negevensis Z] >g... 56.6 1e-06
gi|299534539|ref|ZP_07047871.1| hypothetical protein BFZC1_00882... 55.8 2e-06
gi|294497145|ref|YP_003560845.1| hypothetical protein BMQ_0329 [... 55.5 3e-06
gi|163841806|ref|YP_001626211.1| hypothetical protein RSal33209_... 55.5 3e-06
gi|295702516|ref|YP_003595591.1| hypothetical protein BMD_0330 [... 55.1 4e-06
gi|169826879|ref|YP_001697037.1| hypothetical protein Bsph_1299 ... 55.1 4e-06
gi|335038422|ref|ZP_08531671.1| DoxX family protein [Caldalkalib... 54.7 4e-06
gi|320332937|ref|YP_004169648.1| DoxX family protein [Deinococcu... 54.7 4e-06
gi|345446762|gb|AEN91779.1| Conserved membrane protein YfiD [Bac... 53.9 7e-06
gi|325965297|ref|YP_004243202.1| membrane protein [Arthrobacter ... 53.9 8e-06
gi|126649861|ref|ZP_01722097.1| YfiD [Bacillus sp. B14905] >gi|1... 53.5 9e-06
gi|46446542|ref|YP_007907.1| hypothetical protein pc0908 [Candid... 52.8 2e-05
gi|334337418|ref|YP_004542570.1| DoxX family protein [Isopterico... 52.8 2e-05
gi|94969980|ref|YP_592028.1| DoxX [Candidatus Koribacter versati... 52.8 2e-05
gi|308178220|ref|YP_003917626.1| hypothetical protein AARI_24350... 52.8 2e-05
gi|220914614|ref|YP_002489923.1| DoxX family protein [Arthrobact... 52.4 2e-05
gi|120404562|ref|YP_954391.1| DoxX family protein [Mycobacterium... 51.6 3e-05
gi|326383123|ref|ZP_08204812.1| hypothetical protein SCNU_09301 ... 51.6 4e-05
gi|308172684|ref|YP_003919389.1| hypothetical protein BAMF_0793 ... 51.2 5e-05
gi|154685296|ref|YP_001420457.1| YfiD [Bacillus amyloliquefacien... 51.2 5e-05
gi|339486816|ref|YP_004701344.1| DoxX family protein [Pseudomona... 50.8 6e-05
>gi|15843098|ref|NP_338135.1| hypothetical protein MT3590 [Mycobacterium tuberculosis CDC1551]
gi|308376143|ref|ZP_07668203.1| hypothetical protein TMGG_03977 [Mycobacterium tuberculosis SUMu007]
gi|13883444|gb|AAK47949.1| conserved hypothetical protein [Mycobacterium tuberculosis CDC1551]
gi|308344206|gb|EFP33057.1| hypothetical protein TMGG_03977 [Mycobacterium tuberculosis SUMu007]
Length=163
Score = 292 bits (747), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 149/149 (100%), Positives = 149/149 (100%), Gaps = 0/149 (0%)
Query 1 LHAEGPPSVICIRLLVGLVFLSEGIQKFMYPDQLGPGRFERIGIPAATFFADLDGVVEIV 60
LHAEGPPSVICIRLLVGLVFLSEGIQKFMYPDQLGPGRFERIGIPAATFFADLDGVVEIV
Sbjct 15 LHAEGPPSVICIRLLVGLVFLSEGIQKFMYPDQLGPGRFERIGIPAATFFADLDGVVEIV 74
Query 61 CGTLVLLGLLTRVAAVPLLIDMVGAIVLTKLRALQPGGFLGVEGFWGMAHAARTDLSMLL 120
CGTLVLLGLLTRVAAVPLLIDMVGAIVLTKLRALQPGGFLGVEGFWGMAHAARTDLSMLL
Sbjct 75 CGTLVLLGLLTRVAAVPLLIDMVGAIVLTKLRALQPGGFLGVEGFWGMAHAARTDLSMLL 134
Query 121 GLIFLLWSGPGRWSLDRRLSKRATACGAR 149
GLIFLLWSGPGRWSLDRRLSKRATACGAR
Sbjct 135 GLIFLLWSGPGRWSLDRRLSKRATACGAR 163
>gi|15610622|ref|NP_218003.1| hypothetical protein Rv3486 [Mycobacterium tuberculosis H37Rv]
gi|31794662|ref|NP_857155.1| hypothetical protein Mb3516 [Mycobacterium bovis AF2122/97]
gi|121639405|ref|YP_979629.1| hypothetical protein BCG_3550 [Mycobacterium bovis BCG str. Pasteur
1173P2]
70 more sequence titles
Length=149
Score = 291 bits (746), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 148/149 (99%), Positives = 149/149 (100%), Gaps = 0/149 (0%)
Query 1 LHAEGPPSVICIRLLVGLVFLSEGIQKFMYPDQLGPGRFERIGIPAATFFADLDGVVEIV 60
+HAEGPPSVICIRLLVGLVFLSEGIQKFMYPDQLGPGRFERIGIPAATFFADLDGVVEIV
Sbjct 1 MHAEGPPSVICIRLLVGLVFLSEGIQKFMYPDQLGPGRFERIGIPAATFFADLDGVVEIV 60
Query 61 CGTLVLLGLLTRVAAVPLLIDMVGAIVLTKLRALQPGGFLGVEGFWGMAHAARTDLSMLL 120
CGTLVLLGLLTRVAAVPLLIDMVGAIVLTKLRALQPGGFLGVEGFWGMAHAARTDLSMLL
Sbjct 61 CGTLVLLGLLTRVAAVPLLIDMVGAIVLTKLRALQPGGFLGVEGFWGMAHAARTDLSMLL 120
Query 121 GLIFLLWSGPGRWSLDRRLSKRATACGAR 149
GLIFLLWSGPGRWSLDRRLSKRATACGAR
Sbjct 121 GLIFLLWSGPGRWSLDRRLSKRATACGAR 149
>gi|340628454|ref|YP_004746906.1| hypothetical protein MCAN_35001 [Mycobacterium canettii CIPT
140010059]
gi|340006644|emb|CCC45831.1| conserved hypothetical protein [Mycobacterium canettii CIPT 140010059]
Length=149
Score = 289 bits (739), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 147/149 (99%), Positives = 148/149 (99%), Gaps = 0/149 (0%)
Query 1 LHAEGPPSVICIRLLVGLVFLSEGIQKFMYPDQLGPGRFERIGIPAATFFADLDGVVEIV 60
+HAEGPPSVICIRLLVGLVFLSEGIQKFMYPDQLGPGRFERIGIPAATFFADLDGVVEIV
Sbjct 1 MHAEGPPSVICIRLLVGLVFLSEGIQKFMYPDQLGPGRFERIGIPAATFFADLDGVVEIV 60
Query 61 CGTLVLLGLLTRVAAVPLLIDMVGAIVLTKLRALQPGGFLGVEGFWGMAHAARTDLSMLL 120
CGTLVLLGLLTRVAAVPLLIDMVGAIVLTKLRALQPGGFLGVEGFWGMAHAARTDLSMLL
Sbjct 61 CGTLVLLGLLTRVAAVPLLIDMVGAIVLTKLRALQPGGFLGVEGFWGMAHAARTDLSMLL 120
Query 121 GLIFLLWSGPGRWSLDRRLSKRATACGAR 149
GLIFLLWSGPGRWSLD RLSKRATACGAR
Sbjct 121 GLIFLLWSGPGRWSLDARLSKRATACGAR 149
>gi|339296302|gb|AEJ48413.1| hypothetical protein CCDC5079_3224 [Mycobacterium tuberculosis
CCDC5079]
gi|339299905|gb|AEJ52015.1| hypothetical protein CCDC5180_3178 [Mycobacterium tuberculosis
CCDC5180]
Length=134
Score = 261 bits (666), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 133/134 (99%), Positives = 134/134 (100%), Gaps = 0/134 (0%)
Query 16 VGLVFLSEGIQKFMYPDQLGPGRFERIGIPAATFFADLDGVVEIVCGTLVLLGLLTRVAA 75
+GLVFLSEGIQKFMYPDQLGPGRFERIGIPAATFFADLDGVVEIVCGTLVLLGLLTRVAA
Sbjct 1 MGLVFLSEGIQKFMYPDQLGPGRFERIGIPAATFFADLDGVVEIVCGTLVLLGLLTRVAA 60
Query 76 VPLLIDMVGAIVLTKLRALQPGGFLGVEGFWGMAHAARTDLSMLLGLIFLLWSGPGRWSL 135
VPLLIDMVGAIVLTKLRALQPGGFLGVEGFWGMAHAARTDLSMLLGLIFLLWSGPGRWSL
Sbjct 61 VPLLIDMVGAIVLTKLRALQPGGFLGVEGFWGMAHAARTDLSMLLGLIFLLWSGPGRWSL 120
Query 136 DRRLSKRATACGAR 149
DRRLSKRATACGAR
Sbjct 121 DRRLSKRATACGAR 134
>gi|240170042|ref|ZP_04748701.1| hypothetical protein MkanA1_12066 [Mycobacterium kansasii ATCC
12478]
Length=144
Score = 241 bits (616), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 119/139 (86%), Positives = 131/139 (95%), Gaps = 0/139 (0%)
Query 1 LHAEGPPSVICIRLLVGLVFLSEGIQKFMYPDQLGPGRFERIGIPAATFFADLDGVVEIV 60
LHAEGPP+ ICIRLLVGLVFLSEGIQKF YP QLGPGRFERIGIPAATFFA+LDGVVEIV
Sbjct 2 LHAEGPPAAICIRLLVGLVFLSEGIQKFRYPQQLGPGRFERIGIPAATFFANLDGVVEIV 61
Query 61 CGTLVLLGLLTRVAAVPLLIDMVGAIVLTKLRALQPGGFLGVEGFWGMAHAARTDLSMLL 120
CGT+++LGLLTRVAAVPLL+D++GAI LTK+ L+PGGFLGV+GFWGMAH ARTDLSMLL
Sbjct 62 CGTMIVLGLLTRVAAVPLLVDIIGAITLTKIPELRPGGFLGVQGFWGMAHDARTDLSMLL 121
Query 121 GLIFLLWSGPGRWSLDRRL 139
GLIFLLW+GPGRWSLD RL
Sbjct 122 GLIFLLWAGPGRWSLDARL 140
>gi|162450140|ref|YP_001612507.1| hypothetical protein sce1869 [Sorangium cellulosum 'So ce 56']
gi|161160722|emb|CAN92027.1| unnamed protein product [Sorangium cellulosum 'So ce 56']
Length=160
Score = 140 bits (352), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 82/152 (54%), Positives = 99/152 (66%), Gaps = 7/152 (4%)
Query 1 LHAEGPPSVICIRLLVGLVFLSEGIQKFMYPDQLGPGRFERIGIPAATFFADLDGVVEIV 60
L +E P + + +RL VG VFLSEG+QKF+YP +LG GRF +IGIP GVVEIV
Sbjct 8 LDSEAPAATLLVRLSVGAVFLSEGLQKFIYPAELGAGRFVKIGIPWPEAMGPFVGVVEIV 67
Query 61 CGTLVLLGLLTRVAAVPLLIDMVGAIVLTKLRALQPGGFLGVE-------GFWGMAHAAR 113
CG LVL GLLTR AA L+IDMV A+ TKL L LG GF MAH AR
Sbjct 68 CGALVLAGLLTRFAAALLVIDMVVALASTKLPILLGRDILGFHVRKLPHYGFLSMAHEAR 127
Query 114 TDLSMLLGLIFLLWSGPGRWSLDRRLSKRATA 145
TD +MLLG +FL+ G GRWS+D RL++R +A
Sbjct 128 TDWAMLLGALFLVIVGAGRWSVDARLARRRSA 159
>gi|126434038|ref|YP_001069729.1| DoxX family protein [Mycobacterium sp. JLS]
gi|126233838|gb|ABN97238.1| DoxX family protein [Mycobacterium sp. JLS]
Length=164
Score = 137 bits (345), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 76/151 (51%), Positives = 99/151 (66%), Gaps = 2/151 (1%)
Query 1 LHAEGPPSVICIRLLVGLVFLSEGIQKFMYPDQLGPGRFERIGIPAATFFADLDGVVEIV 60
L P +VI IRL VG+VF SEG+ KF PD LG GRFER GIPA A DGV EI
Sbjct 12 LGTHAPAAVIVIRLYVGVVFASEGVLKFTRPDTLGAGRFERAGIPAPQLLAAADGVFEIG 71
Query 61 CGTLVLLGLLTRVAAVPLLIDMVGAIVLTKLRAL--QPGGFLGVEGFWGMAHAARTDLSM 118
CG L+L+G+LTR+AA+P++++MVGA+++TK+ L Q F G G+ H +RTDL+
Sbjct 72 CGVLILVGMLTRLAALPMIVNMVGALLITKMPILWGQAALFAGASGWGDFLHESRTDLAQ 131
Query 119 LLGLIFLLWSGPGRWSLDRRLSKRATACGAR 149
L G +FLL G G +S+D RL R A +R
Sbjct 132 LCGSLFLLIVGAGAYSVDARLRARFDAPASR 162
>gi|300777297|ref|ZP_07087155.1| DoxX family protein [Chryseobacterium gleum ATCC 35910]
gi|300502807|gb|EFK33947.1| DoxX family protein [Chryseobacterium gleum ATCC 35910]
Length=143
Score = 134 bits (338), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 68/137 (50%), Positives = 91/137 (67%), Gaps = 6/137 (4%)
Query 1 LHAEGPPSVICIRLLVGLVFLSEGIQKFMYPDQLGPGRFERIGIPAATFFADLDGVVEIV 60
+H + + I IRL+VG VFLSEGIQK ++P G GRFE+IG+P+ FF G+ EI+
Sbjct 6 IHTDNSKTTIIIRLIVGGVFLSEGIQKLLFPAIRGAGRFEKIGLPSPEFFGSFVGIFEIL 65
Query 61 CGTLVLLGLLTRVAAVPLLIDMVGAIVLTKLRALQPGGFLGVEGFWGMAHAARTDLSMLL 120
CG +LLGLLTR+A++PL+I M+ AI TK L EG W + H +RTD +MLL
Sbjct 66 CGAFILLGLLTRLASIPLIIIMLVAIATTKTSILAS------EGIWELLHGSRTDWAMLL 119
Query 121 GLIFLLWSGPGRWSLDR 137
G +FLL G G WS+D+
Sbjct 120 GSMFLLIKGGGNWSIDK 136
>gi|146300744|ref|YP_001195335.1| DoxX family protein [Flavobacterium johnsoniae UW101]
gi|146155162|gb|ABQ06016.1| DoxX family protein [Flavobacterium johnsoniae UW101]
Length=143
Score = 129 bits (324), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 67/137 (49%), Positives = 86/137 (63%), Gaps = 6/137 (4%)
Query 6 PPSVICIRLLVGLVFLSEGIQKFMYPDQLGPGRFERIGIPAATFFADLDGVVEIVCGTLV 65
+ I IRL+VG VFLSEGIQKF++ D LG GRF +IG+P F G EI CG +
Sbjct 11 SKTAILIRLMVGAVFLSEGIQKFLFADTLGAGRFAKIGLPNPEFLGPFVGSFEISCGLFI 70
Query 66 LLGLLTRVAAVPLLIDMVGAIVLTKLRALQPGGFLGVEGFWGMAHAARTDLSMLLGLIFL 125
L+GLLTR+A++PL+I M+ AI TK L +GFW M H +RTD +MLLG IFL
Sbjct 71 LVGLLTRLASIPLIIIMIVAIATTKSEVLAE------KGFWEMMHGSRTDWAMLLGSIFL 124
Query 126 LWSGPGRWSLDRRLSKR 142
G G WS+D ++
Sbjct 125 FIKGGGLWSIDNKIMNN 141
>gi|296280700|gb|ADH04643.1| unknown [Sorangium cellulosum]
Length=250
Score = 124 bits (312), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 71/137 (52%), Positives = 88/137 (65%), Gaps = 6/137 (4%)
Query 4 EGPPSVICIRLLVGLVFLSEGIQKFMYPDQLGPGRFERIGIPAATFFADLDGVVEIVCGT 63
P + IRL VG VFLSEGIQKF++ + G GRF RIG+PA L G EI+CG+
Sbjct 111 RAPAPTVLIRLAVGSVFLSEGIQKFLFAAERGAGRFARIGLPAPDVLGPLVGATEILCGS 170
Query 64 LVLLGLLTRVAAVPLLIDMVGAIVLTKLRALQPGGFLGVEGFWGMAHAARTDLSMLLGLI 123
LVLLGL TR+AA+PL+ M+ AI TK+ L GFW MAH +RTD SMLLG +
Sbjct 171 LVLLGLATRLAAMPLIATMLVAITTTKI------PILVQRGFWAMAHDSRTDWSMLLGAL 224
Query 124 FLLWSGPGRWSLDRRLS 140
FLL G G +LD R++
Sbjct 225 FLLIVGAGPLALDARIA 241
>gi|94968350|ref|YP_590398.1| DoxX [Candidatus Koribacter versatilis Ellin345]
gi|94550400|gb|ABF40324.1| DoxX [Candidatus Koribacter versatilis Ellin345]
Length=145
Score = 122 bits (305), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 76/142 (54%), Positives = 92/142 (65%), Gaps = 6/142 (4%)
Query 1 LHAEGPPSVICIRLLVGLVFLSEGIQKFMYPDQLGPGRFERIGIPAATFFADLDGVVEIV 60
+H P + + +RLLVG VFLSEGIQKF++P LG GRF +IGIPA FFA GVVEIV
Sbjct 8 VHTSAPQATVLVRLLVGCVFLSEGIQKFLFPQALGVGRFVKIGIPAPQFFAPFVGVVEIV 67
Query 61 CGTLVLLGLLTRVAAVPLLIDMVGAIVLTKLRALQPGGFLGVEGFWGMAHAARTDLSMLL 120
G L+++GLLTR+AA+ L I++ AI+ TKL L GFW A AR D MLL
Sbjct 68 GGLLLIVGLLTRLAAIALTINISVAILTTKLPMLAKA------GFWATAREARVDFCMLL 121
Query 121 GLIFLLWSGPGRWSLDRRLSKR 142
G IFLL G G S+DRRL
Sbjct 122 GSIFLLIVGAGSLSVDRRLDSN 143
>gi|110636986|ref|YP_677193.1| hypothetical protein CHU_0566 [Cytophaga hutchinsonii ATCC 33406]
gi|110279667|gb|ABG57853.1| conserved hypothetical protein [Cytophaga hutchinsonii ATCC 33406]
Length=145
Score = 112 bits (280), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/142 (45%), Positives = 84/142 (60%), Gaps = 8/142 (5%)
Query 1 LHAEGPPSVICIRLLVGLVFLSEGIQKFMYPDQLGPGRFERIGIPAATFFADLDGVVEIV 60
+H + I IR LVG VFLSEGIQK ++ LG GRFE IG+PA +VEI
Sbjct 6 IHTDNDKQTIIIRFLVGCVFLSEGIQKILFAKTLGSGRFETIGLPAPEILGPFVAMVEIC 65
Query 61 CGTLVLLGLLTRVAAVPLLIDMVGAIVLTKLRALQPGGFLGVE-GFWGMAHAARTDLSML 119
G L+L+GL TR+ VPL++ ++ AI TK + VE GFW + H +RTD +ML
Sbjct 66 GGFLLLIGLFTRLVCVPLIVVILAAIATTK-------SVIYVEKGFWELLHNSRTDWAML 118
Query 120 LGLIFLLWSGPGRWSLDRRLSK 141
LG +FL G G +S+D +K
Sbjct 119 LGCMFLFIKGSGFYSVDYTYNK 140
>gi|182413990|ref|YP_001819056.1| DoxX family protein [Opitutus terrae PB90-1]
gi|177841204|gb|ACB75456.1| DoxX family protein [Opitutus terrae PB90-1]
Length=161
Score = 111 bits (278), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 75/138 (55%), Positives = 89/138 (65%), Gaps = 7/138 (5%)
Query 8 SVICIRLLVGLVFLSEGIQKFMYPDQLGPGRFERIGIPAATFFADLDGVVEIVCGTLVLL 67
+V IRL VG VF EG+QKFMYP +L GRF +IGIP F G VEIVCG L++L
Sbjct 16 AVFLIRLAVGAVFFFEGVQKFMYPAELAAGRFAKIGIPWPQFTGPFVGGVEIVCGALIVL 75
Query 68 GLLTRVAAVPLLIDMVGAIVLTKLRALQPGGFLGVE-------GFWGMAHAARTDLSMLL 120
GL+TR+AAVPLLI++ AIV TKL L GF G GF M H ARTD +M L
Sbjct 76 GLVTRLAAVPLLINISVAIVSTKLPILLGHGFAGFTLAKLPRYGFLSMMHEARTDFTMWL 135
Query 121 GLIFLLWSGPGRWSLDRR 138
GL+FLL G G WS+D +
Sbjct 136 GLLFLLLVGAGGWSMDAQ 153
>gi|338535658|ref|YP_004668992.1| hypothetical protein LILAB_30165 [Myxococcus fulvus HW-1]
gi|337261754|gb|AEI67914.1| hypothetical protein LILAB_30165 [Myxococcus fulvus HW-1]
Length=152
Score = 107 bits (267), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 73/146 (50%), Positives = 95/146 (66%), Gaps = 6/146 (4%)
Query 1 LHAEGPPSVICIRLLVGLVFLSEGIQKFMYPDQLGPGRFERIGIPAATFFADLDGVVEIV 60
L P + + IR +VG VF+SEG+QKF+ P ++G GRF RIG+PA G VE++
Sbjct 11 LVTRAPAATLLIRWMVGGVFVSEGLQKFLIPAEVGAGRFARIGLPAPEVLGPFVGAVEVL 70
Query 61 CGTLVLLGLLTRVAAVPLLIDMVGAIVLTKLRALQPGGFLGVEGFWGMAHAARTDLSMLL 120
CG LVLLGL+TR+AAVPL++ M+ A+ TK+ L GFW MAHA+RTD SMLL
Sbjct 71 CGVLVLLGLVTRLAAVPLILTMLVAMATTKVPILL------ASGFWKMAHASRTDFSMLL 124
Query 121 GLIFLLWSGPGRWSLDRRLSKRATAC 146
G +FLLW G G S+D L +R A
Sbjct 125 GALFLLWVGAGPRSMDTWLLRRRGAA 150
>gi|294508490|ref|YP_003572548.1| hypothetical protein SRM_02675 [Salinibacter ruber M8]
gi|294344818|emb|CBH25596.1| conserved hypothetical protein, membrane [Salinibacter ruber
M8]
Length=153
Score = 101 bits (251), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 64/132 (49%), Positives = 80/132 (61%), Gaps = 7/132 (5%)
Query 12 IRLLVGLVFLSEGIQKFMYPDQLGPGRFERIGIPAATFFADLDGVVEIVCGTLVLLGLLT 71
+RL+VG VFLSEG+QKF+YP GPGRF +G P A L G E+VCG L+L+G T
Sbjct 20 VRLMVGAVFLSEGLQKFLYPTLRGPGRFADMGWPVPELLASLVGGTEVVCGLLILIGFYT 79
Query 72 RVAAVPLLIDMVGAIVLTKLRALQPGGF-------LGVEGFWGMAHAARTDLSMLLGLIF 124
R+AA M AI+ TK+ GF LG GFW MAHA RTD +MLLG +
Sbjct 80 RLAAAGTATIMTTAIITTKIPIWLGEGFGPFEVRTLGEYGFWSMAHAMRTDWAMLLGSLV 139
Query 125 LLWSGPGRWSLD 136
L+ +G G W+ D
Sbjct 140 LVIAGAGPWATD 151
>gi|83816002|ref|YP_446552.1| hypothetical protein SRU_2453 [Salinibacter ruber DSM 13855]
gi|83757396|gb|ABC45509.1| putative membrane protein [Salinibacter ruber DSM 13855]
Length=168
Score = 99.0 bits (245), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/132 (49%), Positives = 80/132 (61%), Gaps = 7/132 (5%)
Query 12 IRLLVGLVFLSEGIQKFMYPDQLGPGRFERIGIPAATFFADLDGVVEIVCGTLVLLGLLT 71
+RL+VG VFLSEG+QKF+YP GPGRF +G P A L G E+VCG L+L+G T
Sbjct 35 VRLMVGAVFLSEGLQKFLYPVLRGPGRFADMGWPVPEGVASLVGGTEVVCGLLILIGFYT 94
Query 72 RVAAVPLLIDMVGAIVLTKLRALQPGGF-------LGVEGFWGMAHAARTDLSMLLGLIF 124
R+AA M AI+ TK+ GF LG GFW MAHA RTD +MLLG +
Sbjct 95 RLAAAGTATIMTTAIITTKIPIWLGEGFGPFEVRTLGEYGFWSMAHAMRTDWAMLLGSLV 154
Query 125 LLWSGPGRWSLD 136
L+ +G G W+ D
Sbjct 155 LVIAGAGPWATD 166
>gi|85715794|ref|ZP_01046773.1| hypothetical protein NB311A_13456 [Nitrobacter sp. Nb-311A]
gi|85697447|gb|EAQ35326.1| hypothetical protein NB311A_13456 [Nitrobacter sp. Nb-311A]
Length=190
Score = 88.6 bits (218), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/137 (45%), Positives = 82/137 (60%), Gaps = 7/137 (5%)
Query 9 VICIRLLVGLVFLSEGIQKFMYPDQLGPGRFERIGIPAATFFADLDGVVEIVCGTLVLLG 68
I IRL + VF+ EG+QK + D LG GRF +IGIP FF GV+E++ G + L+G
Sbjct 38 AIFIRLALAGVFIPEGLQKLTHADILGAGRFVKIGIPWPEFFGPFVGVIEMLAGIMFLIG 97
Query 69 LLTRVAAVPLLIDMVGAIVLTKLRALQPGGF-------LGVEGFWGMAHAARTDLSMLLG 121
+R AAVP+++ M+ AI+ TK+ L + L GF H RTD +ML+G
Sbjct 98 YASRAAAVPIIVIMIVAIISTKIPILLGRNWWIFSLRHLDRYGFLSFTHETRTDWAMLMG 157
Query 122 LIFLLWSGPGRWSLDRR 138
IF+L SG GRWSLD R
Sbjct 158 AIFMLLSGSGRWSLDAR 174
>gi|85717675|ref|ZP_01048612.1| hypothetical protein NB311A_00380 [Nitrobacter sp. Nb-311A]
gi|85695498|gb|EAQ33419.1| hypothetical protein NB311A_00380 [Nitrobacter sp. Nb-311A]
Length=164
Score = 77.0 bits (188), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 55/144 (39%), Positives = 72/144 (50%), Gaps = 26/144 (18%)
Query 10 ICIRLLVGLVFLSEGIQKFMYPDQLGPGRFERIGIPAATFFADLDGVVEIVCGTLVLLGL 69
I IRL + VF+ EG+QK + D LG GRF +IGIP FF GV+E++ G + L+G
Sbjct 16 IFIRLALAGVFIPEGLQKLTHADILGAGRFVKIGIPWPEFFGPFVGVIEMLAGIMFLIGY 75
Query 70 LTRVA---------------AVPLLIDMVGAIVLTKLRALQPGGFLGVEGFWGMAHAART 114
+R A +P+L+ I LR L GFL H R
Sbjct 76 ASRAAAVPIIVIMIVAIISTKIPILLGRNWWIF--SLRHLDRYGFL------SFTHETR- 126
Query 115 DLSMLLGLIFLLWSGPGRWSLDRR 138
+ML+ IF+L SG GRWSLD R
Sbjct 127 --AMLMSAIFMLLSGSGRWSLDAR 148
>gi|226356723|ref|YP_002786463.1| hypothetical protein Deide_17380 [Deinococcus deserti VCD115]
gi|226318713|gb|ACO46709.1| Conserved hypothetical protein; putative membrane protein [Deinococcus
deserti VCD115]
Length=143
Score = 64.7 bits (156), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/136 (34%), Positives = 71/136 (53%), Gaps = 12/136 (8%)
Query 8 SVICIRLLVGLVFLSEGIQKF-MYPDQLGPGRFERIGIPAATFFADLDGVVEIVCGTLVL 66
++ +R+++G +F++ G QKF +Y G F ++G+P A L +E++ G ++
Sbjct 18 ALTLLRVVIGAIFIAHGFQKFFLYTLPGTTGAFTQMGVPLPGLTAPLVATLELLGGLALV 77
Query 67 LGLLTRVAAVPLLIDMVGAIVLTKLRALQPGGFLGVEGFWGMAHAARTDLSMLLGLIFLL 126
G LTR A L M+GA+VL L P GFLG G L+++ L
Sbjct 78 AGFLTRPVAALLAATMLGALVLVHL----PAGFLGANGM-------EFPLALMAATSALA 126
Query 127 WSGPGRWSLDRRLSKR 142
SG GR++LD LS+R
Sbjct 127 LSGAGRYALDHVLSRR 142
>gi|317123222|ref|YP_004097334.1| DoxX family protein [Intrasporangium calvum DSM 43043]
gi|315587310|gb|ADU46607.1| DoxX family protein [Intrasporangium calvum DSM 43043]
Length=153
Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/138 (35%), Positives = 72/138 (53%), Gaps = 11/138 (7%)
Query 9 VICIRLLVGLVFLSEGIQKFMYPDQLGPGR-FERIGIPAATFFADLDGVVEIVCGTLVLL 67
++ R+L+G +FL+ G QK G G F+++G+P A L ++E+V G ++L
Sbjct 15 LLVARVLLGAIFLAHGWQKLTEWGLDGTGAAFDQMGVPLPGIAATLAALIELVGGIALIL 74
Query 68 GLLTRVAAVPLLIDMVGAIVLTKLRALQPGGFLGVEGFWGMAHAARTDLSMLLGLIFLLW 127
G LT V +V L++DMVGA VL + G E W + A G++ L
Sbjct 75 GALTTVFSVLLVLDMVGAAVLVHI----GNGVFITENGWELVAALGA------GVLLLAA 124
Query 128 SGPGRWSLDRRLSKRATA 145
+G G +S+DR LS R A
Sbjct 125 TGAGAYSVDRMLSPRPQA 142
>gi|52784659|ref|YP_090488.1| YfiD [Bacillus licheniformis ATCC 14580]
gi|163119301|ref|YP_078084.2| membrane protein YfiD [Bacillus licheniformis ATCC 14580]
gi|319646922|ref|ZP_08001150.1| YfiD protein [Bacillus sp. BT1B_CT2]
gi|52347161|gb|AAU39795.1| YfiD [Bacillus licheniformis ATCC 14580]
gi|145902807|gb|AAU22446.2| conserved membrane protein YfiD [Bacillus licheniformis ATCC
14580]
gi|317390981|gb|EFV71780.1| YfiD protein [Bacillus sp. BT1B_CT2]
Length=147
Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/133 (35%), Positives = 68/133 (52%), Gaps = 10/133 (7%)
Query 10 ICIRLLVGLVFLSEGIQKFMYPDQLGPGRFERIGIPAATFFADLDGVVEIVCGTLVLLGL 69
+ +RL+ GL FL G+ KF + G F +GIP F A + ++E+ G L++LGL
Sbjct 10 LILRLVTGLTFLLHGLSKFQGGIENTVGFFSSVGIPG--FLAYIVAIIELAGGALMILGL 67
Query 70 LTRVAAVPLLIDMVGAIVLTKLRALQPGGFLGVEGFWGMAHAARTDLSMLLGLIFLLWSG 129
TRV + I M+GAI KL A GF+G +G G D+++L ++L SG
Sbjct 68 GTRVIGLLFAIVMLGAIFTVKLSA----GFMGTDGGAGY----EFDVTLLAMSVYLALSG 119
Query 130 PGRWSLDRRLSKR 142
SL + K
Sbjct 120 SSMLSLGEMILKS 132
>gi|294500630|ref|YP_003564330.1| hypothetical protein BMQ_3883 [Bacillus megaterium QM B1551]
gi|295705983|ref|YP_003599058.1| DoxX family protein [Bacillus megaterium DSM 319]
gi|294350567|gb|ADE70896.1| conserved membrane protein YfiD [Bacillus megaterium QM B1551]
gi|294803642|gb|ADF40708.1| DoxX family protein [Bacillus megaterium DSM 319]
Length=131
Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/130 (33%), Positives = 64/130 (50%), Gaps = 15/130 (11%)
Query 12 IRLLVGLVFLSEGIQKFMYPDQLGPGRFERIGIPAATFFADLDGVVEIVCGTLVLLGLLT 71
+RL++GL F G+ KF G F +GIPA FFA V+E V G ++LG T
Sbjct 11 LRLMLGLTFFIHGLGKFQSGIDNTVGFFHSMGIPA--FFAYAVAVIEFVGGAAMILGFQT 68
Query 72 RVAAVPLLIDMVGAIVLTKLRALQPGGFLGVEGFWGMAHAARTDLSMLLGLIFLLWSGPG 131
R+ V I M+GAI K A GG+ ++++ + + ++ +G G
Sbjct 69 RLIGVLFAIVMIGAIFTAKSGAGFTGGY-------------ELEVALFVVSLHMILAGSG 115
Query 132 RWSLDRRLSK 141
++LD RL K
Sbjct 116 AYALDNRLQK 125
>gi|237785122|ref|YP_002905827.1| hypothetical protein ckrop_0510 [Corynebacterium kroppenstedtii
DSM 44385]
gi|237758034|gb|ACR17284.1| putative membrane protein [Corynebacterium kroppenstedtii DSM
44385]
Length=138
Score = 57.8 bits (138), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/137 (32%), Positives = 74/137 (55%), Gaps = 11/137 (8%)
Query 8 SVICIRLLVGLVFLSEGIQKFMYPDQLGPG-RFERIGIPAATFFADLDGVVEIVCGTLVL 66
+++ +R++VGL+F++ G K M G +F+++GIP A L VE++ G ++
Sbjct 12 ALLLLRIVVGLIFIAHGWDKAMMTGLSATGGQFDQLGIPQPELIAALVSFVEMIGGAMIF 71
Query 67 LGLLTRVAAVPLLIDMVGAIVLTKLRALQPGGFLGVEGFWGMAHAARTDLSMLLGLIFLL 126
+G+L A+V L++DMVGA+ L GF G G+ A +++++ IF
Sbjct 72 VGILAPAASVVLIMDMVGALWFVHLHR----GFFVANG--GVEFVALLIVTLIVIAIF-- 123
Query 127 WSGPGRWSLDRRLSKRA 143
G GR SLD +R+
Sbjct 124 --GAGRASLDYFFQRRS 138
>gi|159896999|ref|YP_001543246.1| DoxX family protein [Herpetosiphon aurantiacus DSM 785]
gi|159890038|gb|ABX03118.1| DoxX family protein [Herpetosiphon aurantiacus DSM 785]
Length=148
Score = 57.8 bits (138), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/136 (34%), Positives = 67/136 (50%), Gaps = 10/136 (7%)
Query 9 VICIRLLVGLVFLSEGIQKFMYPDQLGPGRFERIGIPAATFFADLDGVVEIVCGTLVLLG 68
+ +R++VG +F G+ KF + G +GIPA TF A L E++ G +++LG
Sbjct 15 IAILRIVVGFIFFMHGLDKFNGGIEGTAGFLTSLGIPAPTFMAILLIATELIGGIMLMLG 74
Query 69 LLTRVAAVPLLIDMVGAIVLTKLRALQPGGFLGVEGFWGMAHAARTDLSMLLGLIFLLWS 128
L TR AV I MV A+V L A GF EG + L+++ + L+
Sbjct 75 LFTRYVAVAEAIAMVVALVTVHLDA----GFSSREGGY------EYVLALIAASVALVLL 124
Query 129 GPGRWSLDRRLSKRAT 144
G G +LD LS R T
Sbjct 125 GSGSLALDNLLSPRLT 140
>gi|345022700|ref|ZP_08786313.1| hypothetical protein OTW25_15491 [Ornithinibacillus sp. TW25]
Length=121
Score = 57.4 bits (137), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/86 (41%), Positives = 46/86 (54%), Gaps = 2/86 (2%)
Query 16 VGLVFLSEGIQKFMYPDQLGPGRFERIGIPAATFFADLDGVVEIVCGTLVLLGLLTRVAA 75
VG VF++ GI K + PD RF + IP L V+EI CG L+ G+ + A
Sbjct 11 VGYVFITSGIMKLLVPDM--RARFYNLDIPYPETTLFLVAVIEIGCGALIACGMYMKKAT 68
Query 76 VPLLIDMVGAIVLTKLRALQPGGFLG 101
+PLL+ M GAI+L KL L G L
Sbjct 69 IPLLVIMAGAIILDKLPKLLTEGVLS 94
>gi|310642244|ref|YP_003947002.1| doxx family protein [Paenibacillus polymyxa SC2]
gi|309247194|gb|ADO56761.1| DoxX family protein [Paenibacillus polymyxa SC2]
gi|343097239|emb|CCC85448.1| uncharacterized protein [Paenibacillus polymyxa M1]
Length=137
Score = 57.4 bits (137), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/138 (34%), Positives = 73/138 (53%), Gaps = 18/138 (13%)
Query 11 CIRLLVGLVFLSEGIQKFMYPDQLGPGR----FERIGIPAATFFADLDGVVEIVCGTLVL 66
+R+ +G++FL GI KF Q+G G F IG+P F + V+E+V G ++
Sbjct 11 IMRVALGILFLVHGIAKF----QMGLGNVAGWFSSIGVPG--FLGYVVAVIELVGGIALI 64
Query 67 LGLLTRVAAVPLLIDMVGAIVLTKLRALQPGGFLGVEGFWGMAHAARTDLSMLLGLIFLL 126
LGLLTR + L+I ++GAI KL GG +G G D++ +L + L+
Sbjct 65 LGLLTRYVSGLLVIVLIGAIFTAKL----SGGLMG----NGQGAGYELDIAFILVALHLV 116
Query 127 WSGPGRWSLDRRLSKRAT 144
++ R+SLD S+R +
Sbjct 117 FAPTTRFSLDSLFSRRGS 134
>gi|308069207|ref|YP_003870812.1| hypothetical protein PPE_02444 [Paenibacillus polymyxa E681]
gi|305858486|gb|ADM70274.1| Conserved hypothetical protein [Paenibacillus polymyxa E681]
Length=137
Score = 57.0 bits (136), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 46/138 (34%), Positives = 73/138 (53%), Gaps = 18/138 (13%)
Query 11 CIRLLVGLVFLSEGIQKFMYPDQLGPGR----FERIGIPAATFFADLDGVVEIVCGTLVL 66
+R+ +G++FL+ GI KF Q+G G F IG+P F + V+E+V G ++
Sbjct 11 IMRVALGILFLAHGIAKF----QMGLGNVAGWFSSIGVPG--FLGYVVAVIELVGGIALI 64
Query 67 LGLLTRVAAVPLLIDMVGAIVLTKLRALQPGGFLGVEGFWGMAHAARTDLSMLLGLIFLL 126
LGLLTR + L+I ++GAI KL GG +G G D++ +L + L+
Sbjct 65 LGLLTRYVSGLLVIVLIGAIFTAKL----SGGLMG----NGQGAGYELDIAFILVALHLV 116
Query 127 WSGPGRWSLDRRLSKRAT 144
++ R SLD S+R +
Sbjct 117 FAPTTRLSLDSLFSRRES 134
>gi|284031319|ref|YP_003381250.1| DoxX family protein [Kribbella flavida DSM 17836]
gi|283810612|gb|ADB32451.1| DoxX family protein [Kribbella flavida DSM 17836]
Length=151
Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/135 (34%), Positives = 69/135 (52%), Gaps = 14/135 (10%)
Query 13 RLLVGLVFLSEGIQKFMYP--DQLGPGRFERIGIPAATFFADLDGVVEIVCGTLVLLGLL 70
R+ +G++F++ G QKF D G F+++G+PA T A +E++ G ++LG+L
Sbjct 22 RIGLGVIFIAHGWQKFRTNGLDATAAG-FDQMGVPAPTLSAYFAAGIELIGGAALILGVL 80
Query 71 TRVAAVPLLIDMVGAIVLTKLRALQPGGFLGVEGFWGMAHAARTDLSMLLGLIFLLWSGP 130
T VA V L ++M GA+V L G EG W + L + GP
Sbjct 81 TSVAGVLLALNMAGALVFVHL----SNGIFASEGGWELVAGLGLLALTLAAV------GP 130
Query 131 GRWSLDRRLSKRATA 145
GR+S+D L R+TA
Sbjct 131 GRFSVDAML-NRSTA 144
>gi|337751418|ref|YP_004645580.1| YfiD [Paenibacillus mucilaginosus KNP414]
gi|336302607|gb|AEI45710.1| YfiD [Paenibacillus mucilaginosus KNP414]
Length=139
Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/137 (33%), Positives = 73/137 (54%), Gaps = 10/137 (7%)
Query 10 ICIRLLVGLVFLSEGIQKFMYPDQLGPGRFERIGIPAATFFADLDGVVEIVCGTLVLLGL 69
+ +R+++G+ FL G KF G FE +G+P F A L V+E+V G L++LG+
Sbjct 10 LILRVVLGITFLVHGAAKFQMGLGNVSGFFESLGLPG--FMAYLVAVIELVGGALLILGI 67
Query 70 LTRVAAVPLLIDMVGAIVLTKLRALQPGGFLGVEGFWGMAHAARTDLSMLLGLIFLLWSG 129
TR+ ++ L + M+GAIV KL GGF+G G DL++L +L SG
Sbjct 68 GTRIVSILLGLIMLGAIVKVKL----AGGFMG----DGKGAGYELDLALLAISAYLGLSG 119
Query 130 PGRWSLDRRLSKRATAC 146
++++R + +A
Sbjct 120 SSLYAVERLWKRTDSAA 136
>gi|338732547|ref|YP_004671020.1| DoxX [Simkania negevensis Z]
gi|336481930|emb|CCB88529.1| DoxX [Simkania negevensis Z]
Length=157
Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/137 (33%), Positives = 69/137 (51%), Gaps = 8/137 (5%)
Query 9 VICIRLLVGLVFLSEGIQKFMYPDQLGPGRFERI--GIPAATFFADLDGVVEIVCGTLVL 66
+ RL +G+ F+ G K DQ I IP F A +VE++ G L+L
Sbjct 20 IFVTRLGIGIFFILSGFFKLFDSDQHAKLLKTMISANIPFPEFNAYFVPLVELLGGALIL 79
Query 67 LGLLTRVAAVPLLIDMVGAIVLTKLRAL-QPGGFLGVEGFWGMAHAARTDLSMLLGLIFL 125
+GLLT ++A+ LLI MV AIV ++ + GG + +E F+ + T L +L
Sbjct 80 IGLLTSLSALVLLIIMVTAIVTERIAEVAMHGGLILIENFFYLPEVLYT-----LIFFWL 134
Query 126 LWSGPGRWSLDRRLSKR 142
+SGPG+ S D + K+
Sbjct 135 FFSGPGKISFDYVIGKK 151
>gi|299534539|ref|ZP_07047871.1| hypothetical protein BFZC1_00882 [Lysinibacillus fusiformis ZC1]
gi|298729912|gb|EFI70455.1| hypothetical protein BFZC1_00882 [Lysinibacillus fusiformis ZC1]
Length=130
Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/131 (33%), Positives = 66/131 (51%), Gaps = 14/131 (10%)
Query 11 CIRLLVGLVFLSEGIQKFMYPDQLGPGRFERIGIPAATFFADLDGVVEIVCGTLVLLGLL 70
+R+++G++F G QKF F+ +GIP F A + ++E+V G ++LGL
Sbjct 8 ILRIVLGVIFAVHGFQKFQGGISYTADFFDSLGIPG--FMAYIVAIIELVGGIAIILGLA 65
Query 71 TRVAAVPLLIDMVGAIVLTKLRALQPGGFLGVEGFWGMAHAARTDLSMLLGLIFLLW--S 128
TR+ L I M+ AI KL GF+G G G +L + LG I L + +
Sbjct 66 TRIFGALLTITMIVAIFTAKLSI----GFIGANGLAGY------ELDLALGAIALYFALA 115
Query 129 GPGRWSLDRRL 139
G +SLD +L
Sbjct 116 GASSFSLDSQL 126
>gi|294497145|ref|YP_003560845.1| hypothetical protein BMQ_0329 [Bacillus megaterium QM B1551]
gi|294347082|gb|ADE67411.1| conserved hypothetical protein [Bacillus megaterium QM B1551]
Length=140
Score = 55.5 bits (132), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/90 (39%), Positives = 52/90 (58%), Gaps = 2/90 (2%)
Query 10 ICIRLLVGLVFLSEGIQKFMYPDQLGPGRFERIGIPAATFFADLDGVVEIVCGTLVLLGL 69
+ IRL++G FL G QK+ + G F+ +GIP F A + +E+V G L++LGL
Sbjct 10 LIIRLVLGFTFLVHGFQKWQGGIENTVGFFDSLGIPG--FMAYIVATIELVGGVLIILGL 67
Query 70 LTRVAAVPLLIDMVGAIVLTKLRALQPGGF 99
TRV + + M+GAI KL++ GGF
Sbjct 68 ATRVVSALFVAVMLGAIFTAKLKSGFVGGF 97
>gi|163841806|ref|YP_001626211.1| hypothetical protein RSal33209_3076 [Renibacterium salmoninarum
ATCC 33209]
gi|162955282|gb|ABY24797.1| hypothetical membrane spanning protein [Renibacterium salmoninarum
ATCC 33209]
Length=162
Score = 55.5 bits (132), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 71/140 (51%), Gaps = 10/140 (7%)
Query 4 EGPPSVICIRLLVGLVFLSEGIQKFMYPDQLGPGRFERIGIPAATFFADLDGVVEIVCGT 63
P ++ +R++ G++F+ G QKF F +GIPA + A +E++ G
Sbjct 25 SAPLGLLVLRVVTGIIFIMHGWQKFSDGIPATADGFTAMGIPAPSVTAPFIAGLELIGGA 84
Query 64 LVLLGLLTRVAAVPLLIDMVGAIVLTKLRALQPGGFLGVEGFWGMAHAARTDLSMLLGLI 123
+++GLL+R AV L+IDM+GA+V P GF +G + L++
Sbjct 85 ALVIGLLSRPIAVLLVIDMIGALVTVH----APQGFFAGKGGY------EYVLALAAICA 134
Query 124 FLLWSGPGRWSLDRRLSKRA 143
L +GPG+++LD L R+
Sbjct 135 TLALTGPGKFALDGLLFGRS 154
>gi|295702516|ref|YP_003595591.1| hypothetical protein BMD_0330 [Bacillus megaterium DSM 319]
gi|294800175|gb|ADF37241.1| conserved hypothetical protein [Bacillus megaterium DSM 319]
Length=140
Score = 55.1 bits (131), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/90 (39%), Positives = 52/90 (58%), Gaps = 2/90 (2%)
Query 10 ICIRLLVGLVFLSEGIQKFMYPDQLGPGRFERIGIPAATFFADLDGVVEIVCGTLVLLGL 69
+ IRL++G FL G QK+ + G F+ +GIP F A + +E+V G L++LGL
Sbjct 10 LIIRLVLGFTFLVHGFQKWQGGIENTVGFFDSLGIPG--FMAYIVATIELVGGILIILGL 67
Query 70 LTRVAAVPLLIDMVGAIVLTKLRALQPGGF 99
TRV + + M+GAI KL++ GGF
Sbjct 68 ATRVVSALFVAVMLGAIFTAKLKSGFVGGF 97
>gi|169826879|ref|YP_001697037.1| hypothetical protein Bsph_1299 [Lysinibacillus sphaericus C3-41]
gi|168991367|gb|ACA38907.1| Hypothetical yfiD protein [Lysinibacillus sphaericus C3-41]
Length=130
Score = 55.1 bits (131), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/131 (34%), Positives = 66/131 (51%), Gaps = 14/131 (10%)
Query 11 CIRLLVGLVFLSEGIQKFMYPDQLGPGRFERIGIPAATFFADLDGVVEIVCGTLVLLGLL 70
+R+++G++F G QKF F+ IGIP F A + ++E+V G ++LGL
Sbjct 8 ILRVVLGIIFAVHGFQKFQGGISYTADFFDSIGIPG--FMAYIVAIIELVGGIALILGLA 65
Query 71 TRVAAVPLLIDMVGAIVLTKLRALQPGGFLGVEGFWGMAHAARTDLSMLLGLIFLLWS-- 128
TR+ L I M+ AI KL GF+G +G G +L + LG I L ++
Sbjct 66 TRIFGALLTITMIVAIFTAKLSI----GFIGADGLAGY------ELDLALGAIALYFTLA 115
Query 129 GPGRWSLDRRL 139
G SLD +L
Sbjct 116 GASSLSLDAQL 126
>gi|335038422|ref|ZP_08531671.1| DoxX family protein [Caldalkalibacillus thermarum TA2.A1]
gi|334181681|gb|EGL84197.1| DoxX family protein [Caldalkalibacillus thermarum TA2.A1]
Length=136
Score = 54.7 bits (130), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/135 (35%), Positives = 67/135 (50%), Gaps = 10/135 (7%)
Query 8 SVICIRLLVGLVFLSEGIQKFMYPDQLGPGRFERIGIPAATFFADLDGVVEIVCGTLVLL 67
S++ +R+++GL F G+ KF G F IG+P F A + +VE+ G ++L
Sbjct 8 SLLILRVVLGLSFFVHGLVKFQSGLSNIAGWFSSIGLPG--FLAYVVAIVELAGGIAMIL 65
Query 68 GLLTRVAAVPLLIDMVGAIVLTKLRALQPGGFLGVEGFWGMAHAARTDLSMLLGLIFLLW 127
G+ TRV A M+GAI K+ A GFLG E G DL+ L + LL
Sbjct 66 GIGTRVVAFLFAFIMIGAIFTVKISA----GFLGNEQMAGY----ELDLAFLAMSVALLI 117
Query 128 SGPGRWSLDRRLSKR 142
SG ++LD+ R
Sbjct 118 SGSRLYALDQLFQSR 132
>gi|320332937|ref|YP_004169648.1| DoxX family protein [Deinococcus maricopensis DSM 21211]
gi|319754226|gb|ADV65983.1| DoxX family protein [Deinococcus maricopensis DSM 21211]
Length=145
Score = 54.7 bits (130), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/91 (37%), Positives = 50/91 (55%), Gaps = 3/91 (3%)
Query 11 CIRLLVGLVFLSEGIQK-FMYPDQLGPGRFERIGIPAATFFADLDGVVEIVCGTLVLLGL 69
+R+L+GL+F++ G QK F Y G F +G+P A +E++ G ++ G
Sbjct 22 VLRILIGLIFVAHGAQKIFSYTLSGTVGAFTEMGVPLPPLTAPSIAFIELIGGAALVSGF 81
Query 70 LTRVAAVPLLIDMVGAIVLTKLRA--LQPGG 98
TR AAV L +DM+GAI+ L+A P G
Sbjct 82 FTRAAAVLLALDMLGAIIFVHLKAGFFNPAG 112
>gi|345446762|gb|AEN91779.1| Conserved membrane protein YfiD [Bacillus megaterium WSH-002]
Length=140
Score = 53.9 bits (128), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/90 (39%), Positives = 51/90 (57%), Gaps = 2/90 (2%)
Query 10 ICIRLLVGLVFLSEGIQKFMYPDQLGPGRFERIGIPAATFFADLDGVVEIVCGTLVLLGL 69
+ IRL++G FL G QK+ + G F+ +GIP F A + +E+V G L++LGL
Sbjct 10 LIIRLVLGFTFLVHGFQKWQGGIENTVGFFDSLGIPG--FMAYIVATIELVGGILIILGL 67
Query 70 LTRVAAVPLLIDMVGAIVLTKLRALQPGGF 99
TRV + M+GAI KL++ GGF
Sbjct 68 ATRVIGALFIAVMLGAIFTAKLKSGFVGGF 97
>gi|325965297|ref|YP_004243202.1| membrane protein [Arthrobacter phenanthrenivorans Sphe3]
gi|323471384|gb|ADX75068.1| putative membrane protein [Arthrobacter phenanthrenivorans Sphe3]
Length=150
Score = 53.9 bits (128), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 41/134 (31%), Positives = 69/134 (52%), Gaps = 11/134 (8%)
Query 11 CIRLLVGLVFLSEGIQK-FMYPDQLGPGRFERIGIPAATFFADLDGVVEIVCGTLVLLGL 69
+RL+VG++F + G QK F Y F ++G+PAA A + G +E++ G +++G+
Sbjct 18 VLRLVVGVIFFAHGWQKIFDYTIPGTQASFAQMGVPAAQMVAPVIGFLELLGGAAIIVGV 77
Query 70 LTRVAAVPLLIDMVGAIVLTKLRALQPGGFLGVEGFWGMAHAARTDLSMLLGLIFLLWSG 129
L R A+ L +DM+GA+ L P G +G + + L + G L G
Sbjct 78 LVRPVAILLALDMLGALFLVH----APAGIFADKGGYELV------LVLAAGSAALAIVG 127
Query 130 PGRWSLDRRLSKRA 143
GR+S+D + R+
Sbjct 128 AGRFSIDALVFGRS 141
>gi|126649861|ref|ZP_01722097.1| YfiD [Bacillus sp. B14905]
gi|126593580|gb|EAZ87525.1| YfiD [Bacillus sp. B14905]
Length=130
Score = 53.5 bits (127), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 42/131 (33%), Positives = 67/131 (52%), Gaps = 14/131 (10%)
Query 11 CIRLLVGLVFLSEGIQKFMYPDQLGPGRFERIGIPAATFFADLDGVVEIVCGTLVLLGLL 70
+R+++G++F G QKF F+ +GIP F A + ++E+V G ++LGL
Sbjct 8 ILRVVLGIIFAVHGFQKFQGGISYTADFFDSLGIPG--FMAYIVAIIELVGGIALILGLA 65
Query 71 TRVAAVPLLIDMVGAIVLTKLRALQPGGFLGVEGFWGMAHAARTDLSMLLGLIFLLWS-- 128
TR+ L + M+ AI KL GF+G +G G +L + LG I L ++
Sbjct 66 TRIFGALLTMTMIVAIFTAKLSI----GFIGADGLAGY------ELDLALGAIALYFTLA 115
Query 129 GPGRWSLDRRL 139
G +SLD +L
Sbjct 116 GASSFSLDAQL 126
>gi|46446542|ref|YP_007907.1| hypothetical protein pc0908 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46400183|emb|CAF23632.1| hypothetical protein pc0908 [Candidatus Protochlamydia amoebophila
UWE25]
Length=155
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/135 (32%), Positives = 63/135 (47%), Gaps = 7/135 (5%)
Query 7 PSVICIRLLVGLVFLSEGIQKFMYPDQLGPGRFERIGIPAATFFADLDGVVEIVCGTLVL 66
P ++ RL G +FL G K + D + PA FFA L E G ++
Sbjct 22 PILMLCRLYWGTLFLLAGWGKLTHMDPFI-SLLTQFDFPAPYFFAYLAACTEFFGGICLI 80
Query 67 LGLLTRVAAVPLLIDMVGAIVLTKLRALQPGGFLGVEGFWGMAHAARTDLSMLLGLIFLL 126
LGL +RVAA+PL+I M+ A +L+ F F A + + LL +F+
Sbjct 81 LGLASRVAAIPLIITMLIAYATAHQESLK-SIFRNPTEF-----VAESPFNFLLISLFVF 134
Query 127 WSGPGRWSLDRRLSK 141
GPGR+S+D + K
Sbjct 135 AFGPGRFSIDYLIEK 149
>gi|334337418|ref|YP_004542570.1| DoxX family protein [Isoptericola variabilis 225]
gi|334107786|gb|AEG44676.1| DoxX family protein [Isoptericola variabilis 225]
Length=147
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/131 (33%), Positives = 69/131 (53%), Gaps = 11/131 (8%)
Query 8 SVICIRLLVGLVFLSEGIQKFMYPDQLGPGRF-ERIGIPAATFFADLDGVVEIVCGTLVL 66
+V+ R+ +G +FL+ G QK + G F E++G+PAA A L +VE+V G ++
Sbjct 11 AVLLARVALGAIFLAHGWQKLVTNGIDGTAAFFEQVGVPAAAAAAWLVALVEVVGGAALV 70
Query 67 LGLLTRVAAVPLLIDMVGAIVLTKLRALQPGGFLGVEGFWGMAHAARTDLSMLLGLIFLL 126
LG+ V L++DM+GA A G F+ G+ L++ G++ L+
Sbjct 71 LGVAVPVVGALLVVDMIGAFAFVHAGA---GIFVDQGGY-------ELVLALAAGVVLLV 120
Query 127 WSGPGRWSLDR 137
+G GRWS+D
Sbjct 121 AAGAGRWSVDH 131
>gi|94969980|ref|YP_592028.1| DoxX [Candidatus Koribacter versatilis Ellin345]
gi|94552030|gb|ABF41954.1| DoxX [Candidatus Koribacter versatilis Ellin345]
Length=147
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/134 (30%), Positives = 69/134 (52%), Gaps = 15/134 (11%)
Query 12 IRLLVGLVFLSEGIQK---FMYPDQLGPGRFERIGIPAATFFADLDGVVEIVCGTLVLLG 68
+R++VG+VF++ G+QK + YP +G F+++GIPA A L E++ G +++ G
Sbjct 13 MRVMVGVVFVAHGLQKLLVYHYPGVVG--SFQKMGIPAPGVSAALAIAAELIGGLMLVTG 70
Query 69 LLTRVAAVPLLIDMVGAIVLTKLRALQPGGFLGVEGFWGMAHAARTDLSMLLGLIFLLWS 128
TR+AA+P+ M AI L GF+ L++L+ + + S
Sbjct 71 FYTRLAAIPVAFTMFVAIGQVHLH----------NGFFAQGGGFEYPLTLLVANVAFMIS 120
Query 129 GPGRWSLDRRLSKR 142
G G ++LD + R
Sbjct 121 GGGAFALDNLRTTR 134
>gi|308178220|ref|YP_003917626.1| hypothetical protein AARI_24350 [Arthrobacter arilaitensis Re117]
gi|307745683|emb|CBT76655.1| conserved hypothetical membrane protein [Arthrobacter arilaitensis
Re117]
Length=149
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/137 (36%), Positives = 68/137 (50%), Gaps = 17/137 (12%)
Query 10 ICIRLLVGLVFLSEGIQKFM-YPDQLGPGRFERIGIPAATFFADLDGVVEIVCGTLVLLG 68
I +RL G +FL+ G QKF Y + F ++G+PAA A + +EIV G ++LG
Sbjct 16 ILLRLAFGFLFLAHGWQKFFQYTIEGTTAAFGQMGVPAAGLIAPVAATLEIVGGAAIILG 75
Query 69 LLTRVAAVPLLIDMVGAIVLTKLRA---LQPGGFLGVEGFWGMAHAARTDLSMLLGLIFL 125
LLTRV A L + MV A+ + A ++ GGF L++ G + L
Sbjct 76 LLTRVFAGLLGLQMVAALFMIHAPAGVFVENGGF-------------ELVLALAAGALAL 122
Query 126 LWSGPGRWSLDRRLSKR 142
GPGR SLD + K
Sbjct 123 FLVGPGRISLDALIFKN 139
>gi|220914614|ref|YP_002489923.1| DoxX family protein [Arthrobacter chlorophenolicus A6]
gi|219861492|gb|ACL41834.1| DoxX family protein [Arthrobacter chlorophenolicus A6]
Length=144
Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/138 (32%), Positives = 67/138 (49%), Gaps = 11/138 (7%)
Query 6 PPSVICIRLLVGLVFLSEGIQKFMYPDQLGP-GRFERIGIPAATFFADLDGVVEIVCGTL 64
++ +R+++G +F + G QKF G F ++G+PAA A V+E+ G
Sbjct 8 TTAITALRIVLGFLFAAHGWQKFNEWTIAGTQASFAKMGVPAADVMAPAVAVLELAGGIA 67
Query 65 VLLGLLTRVAAVPLLIDMVGAIVLTKLRALQPGGFLGVEGFWGMAHAARTDLSMLLGLIF 124
++LGLLTRV A L ++M+GA+ L A G F G+ L +
Sbjct 68 LILGLLTRVVAALLALNMLGALFLVHASA---GVFAANGGY-------ELVLLLAAAAFA 117
Query 125 LLWSGPGRWSLDRRLSKR 142
L +G GR S+DR L R
Sbjct 118 LALTGAGRVSVDRALFGR 135
>gi|120404562|ref|YP_954391.1| DoxX family protein [Mycobacterium vanbaalenii PYR-1]
gi|119957380|gb|ABM14385.1| DoxX family protein [Mycobacterium vanbaalenii PYR-1]
Length=148
Score = 51.6 bits (122), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/146 (31%), Positives = 64/146 (44%), Gaps = 13/146 (8%)
Query 1 LHAEGPPSVICIRLLVGLVFLSEGIQKFM-YPD--QLGPGRFERIGIPAATFFADLDGVV 57
L + P + R++ GL+F G QK + +P Q GPG F +P T+ G++
Sbjct 9 LTSYSAPVLSIFRIVFGLLFTLHGAQKVLAWPTGMQAGPGDFTGPAVPVGTWPYWWAGLL 68
Query 58 EIVCGTLVLLGLLTRVAAVPLLIDMVGAIVLTKLRALQPGGFLGVEGFWGMAHAARTDLS 117
EIV G L+ +GL TR+AA M A L P F +E + +
Sbjct 69 EIVLGLLITVGLFTRIAAFIAAGQMAVAYFWQHL----PKAFFPIE------NGGEPAIL 118
Query 118 MLLGLIFLLWSGPGRWSLDRRLSKRA 143
G + L+ G G WS+D RA
Sbjct 119 FCFGFLLLVAMGAGAWSIDALRQGRA 144
>gi|326383123|ref|ZP_08204812.1| hypothetical protein SCNU_09301 [Gordonia neofelifaecis NRRL
B-59395]
gi|326198259|gb|EGD55444.1| hypothetical protein SCNU_09301 [Gordonia neofelifaecis NRRL
B-59395]
Length=157
Score = 51.6 bits (122), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/139 (29%), Positives = 69/139 (50%), Gaps = 11/139 (7%)
Query 8 SVICIRLLVGLVFLSEGIQK-FMYPDQLGPGRFERIGIPAATFFADLDGVVEIVCGTLVL 66
+V R+++G++F + G QK F + FE +G P A + E + G L++
Sbjct 11 AVSIARIILGIIFFAHGWQKLFTFGMDGVKANFETMGAPVPGVSAWFAALAEFIGGGLLI 70
Query 67 LGLLTRVAAVPLLIDMVGAIVLTKLRALQPGGFLGVEGFWGMAHAARTDLSMLLGLIFLL 126
+GL V +V L++DM+GAI + + A GFW L+++ GL+ +
Sbjct 71 VGLAVPVVSVILILDMIGAIFIAHIDA----------GFWVNDGGYELVLALIAGLLAVG 120
Query 127 WSGPGRWSLDRRLSKRATA 145
++ G ++D + K ATA
Sbjct 121 FAKQGFLAVDTYIVKAATA 139
>gi|308172684|ref|YP_003919389.1| hypothetical protein BAMF_0793 [Bacillus amyloliquefaciens DSM
7]
gi|307605548|emb|CBI41919.1| essential for viability in the presence of catechol [Bacillus
amyloliquefaciens DSM 7]
gi|328552453|gb|AEB22945.1| essential for viability in the presence of catechol [Bacillus
amyloliquefaciens TA208]
gi|328910798|gb|AEB62394.1| essential for viability in the presence of catechol [Bacillus
amyloliquefaciens LL3]
gi|341826690|gb|AEK87941.1| hypothetical protein BAXH7_00796 [Bacillus amyloliquefaciens
XH7]
Length=134
Score = 51.2 bits (121), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/134 (33%), Positives = 64/134 (48%), Gaps = 18/134 (13%)
Query 10 ICIRLLVGLVFLSEGIQKFMYPDQLGPGRF-ERIGIPAATFFADLDGVVEIVCGTLVLLG 68
+ +R++ G++F G+ KF + G +F + IGIPA F + +E+V G L+ G
Sbjct 10 LLLRVVTGIIFFVHGLSKFQGLE--GTTQFFQSIGIPA--FMVYVIATIELVGGVLIFFG 65
Query 69 LLTRVAAVPLLIDMVGAIVLTKLRALQPGGFLGVEGFWGMAHAARTDLSMLLGLIFLLWS 128
L TR+ V I +VGAI KL + GG + D +L+ I L S
Sbjct 66 LATRIIGVLFAITLVGAIFTAKLSSPFMGG-------------SEFDFILLVASIHLALS 112
Query 129 GPGRWSLDRRLSKR 142
G SLD+ L K
Sbjct 113 GSRLLSLDQLLFKS 126
>gi|154685296|ref|YP_001420457.1| YfiD [Bacillus amyloliquefaciens FZB42]
gi|154351147|gb|ABS73226.1| YfiD [Bacillus amyloliquefaciens FZB42]
Length=134
Score = 51.2 bits (121), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/134 (32%), Positives = 64/134 (48%), Gaps = 18/134 (13%)
Query 10 ICIRLLVGLVFLSEGIQKFMYPDQLGPGRF-ERIGIPAATFFADLDGVVEIVCGTLVLLG 68
+ +R++ G++F G+ KF + G +F + IGIPA F + +E+V G L+ G
Sbjct 10 LLLRVVTGIIFFVHGLSKFQGLE--GTAQFFQSIGIPA--FMVYVIATIELVGGVLIFFG 65
Query 69 LLTRVAAVPLLIDMVGAIVLTKLRALQPGGFLGVEGFWGMAHAARTDLSMLLGLIFLLWS 128
L TR+ V + +VGAI KL + GG + D +L+ I L S
Sbjct 66 LATRIIGVLFAVTLVGAIFTAKLSSPFMGG-------------SEFDFILLVASIHLALS 112
Query 129 GPGRWSLDRRLSKR 142
G SLD+ L K
Sbjct 113 GSRLLSLDQLLFKS 126
>gi|339486816|ref|YP_004701344.1| DoxX family protein [Pseudomonas putida S16]
gi|338837659|gb|AEJ12464.1| DoxX family protein [Pseudomonas putida S16]
Length=145
Score = 50.8 bits (120), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/137 (33%), Positives = 70/137 (52%), Gaps = 17/137 (12%)
Query 11 CIRLLVGLVFLSEGIQKFM-----YPDQLGPGR-FERIGIPAATFFADLDGVVEIVCGTL 64
IR+LVG++F++ G QK Y + G G+ E IG+ A L G E G
Sbjct 20 VIRILVGIIFIAHGAQKLFGMFGGYGLE-GTGQWMESIGLAPGYLMALLSGSAEFFGGLA 78
Query 65 VLLGLLTRVAAVPLLIDMVGAIVLTKLRALQPGGFLGVEGFWGMAHAARTDLSMLLGLIF 124
+++GLL R AA+ L + +V AI+ + G F+ G+ L++L G +
Sbjct 79 LVIGLLARPAALVLAVTLVVAILSVH---IGNGLFMSNNGY-------EFGLALLAGTVA 128
Query 125 LLWSGPGRWSLDRRLSK 141
+L G GR+SLDR +++
Sbjct 129 VLIEGAGRFSLDRLIAR 145
Lambda K H
0.329 0.147 0.463
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 130023393564
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40