BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv3489 Length=54 Score E Sequences producing significant alignments: (Bits) Value gi|308376145|ref|ZP_07446174.2| hypothetical protein TMGG_03980 ... 112 2e-23 gi|15610625|ref|NP_218006.1| hypothetical protein Rv3489 [Mycoba... 112 2e-23 gi|240170038|ref|ZP_04748697.1| hypothetical protein MkanA1_1204... 106 1e-21 gi|118619243|ref|YP_907575.1| hypothetical protein MUL_4051 [Myc... 102 2e-20 gi|118465030|ref|YP_879946.1| hypothetical protein MAV_0667 [Myc... 102 2e-20 gi|254821775|ref|ZP_05226776.1| hypothetical protein MintA_17717... 101 3e-20 gi|296166523|ref|ZP_06848954.1| conserved hypothetical protein [... 100 9e-20 gi|342862228|ref|ZP_08718870.1| hypothetical protein MCOL_25181 ... 100 1e-19 gi|126437555|ref|YP_001073246.1| hypothetical protein Mjls_4991 ... 92.8 2e-17 gi|108801571|ref|YP_641768.1| hypothetical protein Mmcs_4608 [My... 91.3 5e-17 gi|333992260|ref|YP_004524874.1| hypothetical protein JDM601_362... 90.9 6e-17 gi|145222159|ref|YP_001132837.1| hypothetical protein Mflv_1567 ... 89.0 2e-16 gi|120406139|ref|YP_955968.1| hypothetical protein Mvan_5191 [My... 89.0 2e-16 gi|118470410|ref|YP_890116.1| hypothetical protein MSMEG_5890 [M... 87.0 7e-16 gi|169631222|ref|YP_001704871.1| hypothetical protein MAB_4144 [... 77.8 5e-13 gi|333918331|ref|YP_004491912.1| hypothetical protein AS9A_0658 ... 71.6 4e-11 gi|226364217|ref|YP_002781999.1| hypothetical protein ROP_48070 ... 68.9 2e-10 gi|312138219|ref|YP_004005555.1| hypothetical protein REQ_07540 ... 68.6 3e-10 gi|111021681|ref|YP_704653.1| hypothetical protein RHA1_ro04709 ... 68.6 3e-10 gi|325674875|ref|ZP_08154562.1| hypothetical protein HMPREF0724_... 68.2 4e-10 gi|319951372|ref|ZP_08025197.1| hypothetical protein ES5_16982 [... 67.0 8e-10 gi|296141315|ref|YP_003648558.1| hypothetical protein Tpau_3641 ... 67.0 9e-10 gi|229494443|ref|ZP_04388206.1| conserved hypothetical protein [... 66.6 1e-09 gi|296395313|ref|YP_003660197.1| hypothetical protein Srot_2937 ... 66.2 2e-09 gi|326384026|ref|ZP_08205709.1| hypothetical protein SCNU_13874 ... 65.1 3e-09 gi|317509278|ref|ZP_07966899.1| hypothetical protein HMPREF9336_... 65.1 4e-09 gi|343925778|ref|ZP_08765293.1| hypothetical protein GOALK_050_0... 62.0 3e-08 gi|262200808|ref|YP_003272016.1| hypothetical protein Gbro_0809 ... 60.5 7e-08 gi|226304458|ref|YP_002764416.1| hypothetical protein RER_09690 ... 57.0 8e-07 gi|54022515|ref|YP_116757.1| hypothetical protein nfa5480 [Nocar... 48.5 3e-04 gi|331699939|ref|YP_004336178.1| hypothetical protein Psed_6224 ... 40.4 0.099 gi|227541011|ref|ZP_03971060.1| conserved hypothetical protein [... 36.2 1.6 gi|227489417|ref|ZP_03919733.1| conserved hypothetical protein [... 36.2 1.6 gi|227502099|ref|ZP_03932148.1| conserved hypothetical protein [... 35.8 2.2 gi|227834023|ref|YP_002835730.1| hypothetical protein cauri_2201... 35.4 2.5 gi|226360425|ref|YP_002778203.1| hypothetical protein ROP_10110 ... 35.4 2.8 gi|188989998|ref|YP_001902008.1| hypothetical protein xccb100_06... 35.0 3.2 gi|341938649|gb|AEL08788.1| lipase family [Xanthomonas campestri... 35.0 3.3 gi|227506349|ref|ZP_03936398.1| histone H1 [Corynebacterium stri... 35.0 3.8 >gi|308376145|ref|ZP_07446174.2| hypothetical protein TMGG_03980 [Mycobacterium tuberculosis SUMu007] gi|308344209|gb|EFP33060.1| hypothetical protein TMGG_03980 [Mycobacterium tuberculosis SUMu007] Length=60 Score = 112 bits (280), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 54/54 (100%), Positives = 54/54 (100%), Gaps = 0/54 (0%) Query 1 MSTKSDHGEIGDVEPLADSTASQARRVVAAYANDADECRIFLSMLGIGPAKLES 54 MSTKSDHGEIGDVEPLADSTASQARRVVAAYANDADECRIFLSMLGIGPAKLES Sbjct 7 MSTKSDHGEIGDVEPLADSTASQARRVVAAYANDADECRIFLSMLGIGPAKLES 60 >gi|15610625|ref|NP_218006.1| hypothetical protein Rv3489 [Mycobacterium tuberculosis H37Rv] gi|15843101|ref|NP_338138.1| hypothetical protein MT3593 [Mycobacterium tuberculosis CDC1551] gi|31794665|ref|NP_857158.1| hypothetical protein Mb3519 [Mycobacterium bovis AF2122/97] 51 more sequence titles Length=54 Score = 112 bits (279), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 54/54 (100%), Positives = 54/54 (100%), Gaps = 0/54 (0%) Query 1 MSTKSDHGEIGDVEPLADSTASQARRVVAAYANDADECRIFLSMLGIGPAKLES 54 MSTKSDHGEIGDVEPLADSTASQARRVVAAYANDADECRIFLSMLGIGPAKLES Sbjct 1 MSTKSDHGEIGDVEPLADSTASQARRVVAAYANDADECRIFLSMLGIGPAKLES 54 >gi|240170038|ref|ZP_04748697.1| hypothetical protein MkanA1_12046 [Mycobacterium kansasii ATCC 12478] Length=54 Score = 106 bits (264), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 50/54 (93%), Positives = 53/54 (99%), Gaps = 0/54 (0%) Query 1 MSTKSDHGEIGDVEPLADSTASQARRVVAAYANDADECRIFLSMLGIGPAKLES 54 M TK+DHG+IGDVEP+ADSTASQARRVVAAYANDADECRIFLSMLGIGPAKLES Sbjct 1 MPTKTDHGDIGDVEPVADSTASQARRVVAAYANDADECRIFLSMLGIGPAKLES 54 >gi|118619243|ref|YP_907575.1| hypothetical protein MUL_4051 [Mycobacterium ulcerans Agy99] gi|183984945|ref|YP_001853236.1| hypothetical protein MMAR_4977 [Mycobacterium marinum M] gi|118571353|gb|ABL06104.1| conserved hypothetical protein [Mycobacterium ulcerans Agy99] gi|183178271|gb|ACC43381.1| conserved hypothetical protein [Mycobacterium marinum M] Length=54 Score = 102 bits (254), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 47/54 (88%), Positives = 52/54 (97%), Gaps = 0/54 (0%) Query 1 MSTKSDHGEIGDVEPLADSTASQARRVVAAYANDADECRIFLSMLGIGPAKLES 54 M TK+DHG+IGDVEPLADSTA+QARRVVAAYANDADECR+FLSMLGIGPAK E+ Sbjct 1 MPTKTDHGDIGDVEPLADSTANQARRVVAAYANDADECRVFLSMLGIGPAKPEN 54 >gi|118465030|ref|YP_879946.1| hypothetical protein MAV_0667 [Mycobacterium avium 104] gi|254773623|ref|ZP_05215139.1| hypothetical protein MaviaA2_02960 [Mycobacterium avium subsp. avium ATCC 25291] gi|118166317|gb|ABK67214.1| conserved hypothetical protein [Mycobacterium avium 104] gi|336458379|gb|EGO37355.1| hypothetical protein MAPs_13580 [Mycobacterium avium subsp. paratuberculosis S397] Length=54 Score = 102 bits (253), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 48/54 (89%), Positives = 52/54 (97%), Gaps = 0/54 (0%) Query 1 MSTKSDHGEIGDVEPLADSTASQARRVVAAYANDADECRIFLSMLGIGPAKLES 54 M TKSD GEIGDVEP+ADSTASQARRVVAAYANDADECR+FLSMLGIGPAKL++ Sbjct 1 MPTKSDPGEIGDVEPVADSTASQARRVVAAYANDADECRVFLSMLGIGPAKLDT 54 >gi|254821775|ref|ZP_05226776.1| hypothetical protein MintA_17717 [Mycobacterium intracellulare ATCC 13950] Length=54 Score = 101 bits (252), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 48/54 (89%), Positives = 52/54 (97%), Gaps = 0/54 (0%) Query 1 MSTKSDHGEIGDVEPLADSTASQARRVVAAYANDADECRIFLSMLGIGPAKLES 54 M TKSD GEIGDVEP+ADSTASQARRVVAAYANDADECR+FLSMLGIGPAKL++ Sbjct 1 MPTKSDPGEIGDVEPVADSTASQARRVVAAYANDADECRVFLSMLGIGPAKLDA 54 >gi|296166523|ref|ZP_06848954.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295898135|gb|EFG77710.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length=54 Score = 100 bits (248), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 47/54 (88%), Positives = 52/54 (97%), Gaps = 0/54 (0%) Query 1 MSTKSDHGEIGDVEPLADSTASQARRVVAAYANDADECRIFLSMLGIGPAKLES 54 M+TKSD GEIGDVEP+ADSTASQARRVVAAYA DADECR+FLSMLGIGPAKL++ Sbjct 1 MATKSDPGEIGDVEPVADSTASQARRVVAAYATDADECRVFLSMLGIGPAKLDA 54 >gi|342862228|ref|ZP_08718870.1| hypothetical protein MCOL_25181 [Mycobacterium colombiense CECT 3035] gi|342130306|gb|EGT83626.1| hypothetical protein MCOL_25181 [Mycobacterium colombiense CECT 3035] Length=54 Score = 100 bits (248), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 47/54 (88%), Positives = 51/54 (95%), Gaps = 0/54 (0%) Query 1 MSTKSDHGEIGDVEPLADSTASQARRVVAAYANDADECRIFLSMLGIGPAKLES 54 M TKSD GEIGDVEP+AD TASQARRVVAAYANDADECR+FLSMLGIGPAKL++ Sbjct 1 MPTKSDPGEIGDVEPVADDTASQARRVVAAYANDADECRVFLSMLGIGPAKLDA 54 >gi|126437555|ref|YP_001073246.1| hypothetical protein Mjls_4991 [Mycobacterium sp. JLS] gi|126237355|gb|ABO00756.1| conserved hypothetical protein [Mycobacterium sp. JLS] Length=54 Score = 92.8 bits (229), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 44/54 (82%), Positives = 48/54 (89%), Gaps = 0/54 (0%) Query 1 MSTKSDHGEIGDVEPLADSTASQARRVVAAYANDADECRIFLSMLGIGPAKLES 54 M KSD EIGDVEPLADSTA QAR+VVAAYA DADECR+FLSMLGIGP+KLE+ Sbjct 1 MPAKSDPAEIGDVEPLADSTARQARKVVAAYAVDADECRVFLSMLGIGPSKLEA 54 >gi|108801571|ref|YP_641768.1| hypothetical protein Mmcs_4608 [Mycobacterium sp. MCS] gi|119870725|ref|YP_940677.1| hypothetical protein Mkms_4696 [Mycobacterium sp. KMS] gi|108771990|gb|ABG10712.1| conserved hypothetical protein [Mycobacterium sp. MCS] gi|119696814|gb|ABL93887.1| conserved hypothetical protein [Mycobacterium sp. KMS] Length=54 Score = 91.3 bits (225), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 43/54 (80%), Positives = 48/54 (89%), Gaps = 0/54 (0%) Query 1 MSTKSDHGEIGDVEPLADSTASQARRVVAAYANDADECRIFLSMLGIGPAKLES 54 M KSD +IGDVEPLADSTA QAR+VVAAYA DADECR+FLSMLGIGP+KLE+ Sbjct 1 MPAKSDPADIGDVEPLADSTARQARKVVAAYAVDADECRVFLSMLGIGPSKLEA 54 >gi|333992260|ref|YP_004524874.1| hypothetical protein JDM601_3620 [Mycobacterium sp. JDM601] gi|333488228|gb|AEF37620.1| conserved hypothetical protein [Mycobacterium sp. JDM601] Length=57 Score = 90.9 bits (224), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 43/53 (82%), Positives = 45/53 (85%), Gaps = 0/53 (0%) Query 1 MSTKSDHGEIGDVEPLADSTASQARRVVAAYANDADECRIFLSMLGIGPAKLE 53 M KS+H EI DVEPLADSTA QARRVVAAYA DADECR+FLSMLGIGPA E Sbjct 1 MPAKSEHAEIDDVEPLADSTARQARRVVAAYAEDADECRVFLSMLGIGPANTE 53 >gi|145222159|ref|YP_001132837.1| hypothetical protein Mflv_1567 [Mycobacterium gilvum PYR-GCK] gi|315442597|ref|YP_004075476.1| hypothetical protein Mspyr1_09510 [Mycobacterium sp. Spyr1] gi|145214645|gb|ABP44049.1| conserved hypothetical protein [Mycobacterium gilvum PYR-GCK] gi|315260900|gb|ADT97641.1| hypothetical protein Mspyr1_09510 [Mycobacterium sp. Spyr1] Length=55 Score = 89.0 bits (219), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 42/52 (81%), Positives = 44/52 (85%), Gaps = 0/52 (0%) Query 1 MSTKSDHGEIGDVEPLADSTASQARRVVAAYANDADECRIFLSMLGIGPAKL 52 M K D EIGDVEP+ADST QARRVVAAYA DADECR+FLSMLGIGPAKL Sbjct 1 MPAKPDPTEIGDVEPIADSTERQARRVVAAYATDADECRVFLSMLGIGPAKL 52 >gi|120406139|ref|YP_955968.1| hypothetical protein Mvan_5191 [Mycobacterium vanbaalenii PYR-1] gi|119958957|gb|ABM15962.1| conserved hypothetical protein [Mycobacterium vanbaalenii PYR-1] Length=54 Score = 89.0 bits (219), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 42/51 (83%), Positives = 44/51 (87%), Gaps = 0/51 (0%) Query 1 MSTKSDHGEIGDVEPLADSTASQARRVVAAYANDADECRIFLSMLGIGPAK 51 M KSD EIGDVEP+ADST QARRVVAAYA DADECR+FLSMLGIGPAK Sbjct 1 MPAKSDPAEIGDVEPIADSTERQARRVVAAYATDADECRVFLSMLGIGPAK 51 >gi|118470410|ref|YP_890116.1| hypothetical protein MSMEG_5890 [Mycobacterium smegmatis str. MC2 155] gi|118171697|gb|ABK72593.1| conserved hypothetical protein [Mycobacterium smegmatis str. MC2 155] Length=54 Score = 87.0 bits (214), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 40/53 (76%), Positives = 45/53 (85%), Gaps = 0/53 (0%) Query 1 MSTKSDHGEIGDVEPLADSTASQARRVVAAYANDADECRIFLSMLGIGPAKLE 53 M K+D ++GDVEPLAD TASQARRVVA YA DADECR+FLSMLGIGP+K E Sbjct 1 MPAKTDPADLGDVEPLADDTASQARRVVATYATDADECRMFLSMLGIGPSKTE 53 >gi|169631222|ref|YP_001704871.1| hypothetical protein MAB_4144 [Mycobacterium abscessus ATCC 19977] gi|169243189|emb|CAM64217.1| Conserved hypothetical protein [Mycobacterium abscessus] Length=54 Score = 77.8 bits (190), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 35/54 (65%), Positives = 43/54 (80%), Gaps = 0/54 (0%) Query 1 MSTKSDHGEIGDVEPLADSTASQARRVVAAYANDADECRIFLSMLGIGPAKLES 54 M K+D I D+EPL D TA QA+RVVAAYANDADECR+ L+MLGIGP K+++ Sbjct 1 MPAKTDPAAIDDLEPLTDETAHQAQRVVAAYANDADECRMLLAMLGIGPTKVDA 54 >gi|333918331|ref|YP_004491912.1| hypothetical protein AS9A_0658 [Amycolicicoccus subflavus DQS3-9A1] gi|333480552|gb|AEF39112.1| hypothetical protein AS9A_0658 [Amycolicicoccus subflavus DQS3-9A1] Length=61 Score = 71.6 bits (174), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 32/38 (85%), Positives = 35/38 (93%), Gaps = 0/38 (0%) Query 12 DVEPLADSTASQARRVVAAYANDADECRIFLSMLGIGP 49 D+EPLAD TA QA+RVVAAYA DADECR+FLSMLGIGP Sbjct 15 DIEPLADETARQAQRVVAAYAQDADECRMFLSMLGIGP 52 >gi|226364217|ref|YP_002781999.1| hypothetical protein ROP_48070 [Rhodococcus opacus B4] gi|226242706|dbj|BAH53054.1| hypothetical protein [Rhodococcus opacus B4] Length=57 Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 31/38 (82%), Positives = 34/38 (90%), Gaps = 0/38 (0%) Query 12 DVEPLADSTASQARRVVAAYANDADECRIFLSMLGIGP 49 D+EPLAD TA QA+RVVAAYA DADECR+ LSMLGIGP Sbjct 15 DLEPLADETARQAQRVVAAYAEDADECRMLLSMLGIGP 52 >gi|312138219|ref|YP_004005555.1| hypothetical protein REQ_07540 [Rhodococcus equi 103S] gi|311887558|emb|CBH46870.1| conserved hypothetical protein [Rhodococcus equi 103S] Length=66 Score = 68.6 bits (166), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 33/43 (77%), Positives = 38/43 (89%), Gaps = 1/43 (2%) Query 12 DVEPLADSTASQARRVVAAYANDADECRIFLSMLGIGP-AKLE 53 D+EP+AD TA QA+RVVAAYA DADECR+ LSMLGIGP AKL+ Sbjct 24 DLEPVADETARQAQRVVAAYATDADECRMLLSMLGIGPTAKLD 66 >gi|111021681|ref|YP_704653.1| hypothetical protein RHA1_ro04709 [Rhodococcus jostii RHA1] gi|110821211|gb|ABG96495.1| conserved hypothetical protein [Rhodococcus jostii RHA1] Length=57 Score = 68.6 bits (166), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 31/38 (82%), Positives = 34/38 (90%), Gaps = 0/38 (0%) Query 12 DVEPLADSTASQARRVVAAYANDADECRIFLSMLGIGP 49 D+EPLAD TA QA+RVVAAYA DADECR+ LSMLGIGP Sbjct 15 DLEPLADETARQAQRVVAAYAEDADECRMLLSMLGIGP 52 >gi|325674875|ref|ZP_08154562.1| hypothetical protein HMPREF0724_12344 [Rhodococcus equi ATCC 33707] gi|325554461|gb|EGD24136.1| hypothetical protein HMPREF0724_12344 [Rhodococcus equi ATCC 33707] Length=57 Score = 68.2 bits (165), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 33/43 (77%), Positives = 38/43 (89%), Gaps = 1/43 (2%) Query 12 DVEPLADSTASQARRVVAAYANDADECRIFLSMLGIGP-AKLE 53 D+EP+AD TA QA+RVVAAYA DADECR+ LSMLGIGP AKL+ Sbjct 15 DLEPVADETARQAQRVVAAYATDADECRMLLSMLGIGPTAKLD 57 >gi|319951372|ref|ZP_08025197.1| hypothetical protein ES5_16982 [Dietzia cinnamea P4] gi|319434969|gb|EFV90264.1| hypothetical protein ES5_16982 [Dietzia cinnamea P4] Length=60 Score = 67.0 bits (162), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 30/45 (67%), Positives = 36/45 (80%), Gaps = 0/45 (0%) Query 5 SDHGEIGDVEPLADSTASQARRVVAAYANDADECRIFLSMLGIGP 49 S E+ D+EP+AD TA QARRVVA+Y+ DADECR+ L MLGIGP Sbjct 7 SKEPELDDLEPVADETADQARRVVASYSADADECRMLLDMLGIGP 51 >gi|296141315|ref|YP_003648558.1| hypothetical protein Tpau_3641 [Tsukamurella paurometabola DSM 20162] gi|296029449|gb|ADG80219.1| conserved hypothetical protein [Tsukamurella paurometabola DSM 20162] Length=52 Score = 67.0 bits (162), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 30/38 (79%), Positives = 34/38 (90%), Gaps = 0/38 (0%) Query 12 DVEPLADSTASQARRVVAAYANDADECRIFLSMLGIGP 49 D+EP+AD TA QA+RVVAAYA DADECR+ LSMLGIGP Sbjct 12 DLEPVADETAHQAQRVVAAYAEDADECRMLLSMLGIGP 49 >gi|229494443|ref|ZP_04388206.1| conserved hypothetical protein [Rhodococcus erythropolis SK121] gi|229318805|gb|EEN84663.1| conserved hypothetical protein [Rhodococcus erythropolis SK121] Length=58 Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 30/39 (77%), Positives = 34/39 (88%), Gaps = 0/39 (0%) Query 12 DVEPLADSTASQARRVVAAYANDADECRIFLSMLGIGPA 50 D+EP+AD TA QA+RVVAAYA DADECR+ LSMLGI PA Sbjct 16 DLEPVADETARQAQRVVAAYAEDADECRMLLSMLGISPA 54 >gi|296395313|ref|YP_003660197.1| hypothetical protein Srot_2937 [Segniliparus rotundus DSM 44985] gi|296182460|gb|ADG99366.1| hypothetical protein Srot_2937 [Segniliparus rotundus DSM 44985] Length=62 Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 29/40 (73%), Positives = 32/40 (80%), Gaps = 0/40 (0%) Query 12 DVEPLADSTASQARRVVAAYANDADECRIFLSMLGIGPAK 51 D+EPL D TA QARRVVAAYA D DECR L+MLGIGP + Sbjct 19 DIEPLPDETALQARRVVAAYAQDVDECRTLLAMLGIGPTQ 58 >gi|326384026|ref|ZP_08205709.1| hypothetical protein SCNU_13874 [Gordonia neofelifaecis NRRL B-59395] gi|326197186|gb|EGD54377.1| hypothetical protein SCNU_13874 [Gordonia neofelifaecis NRRL B-59395] Length=55 Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 29/40 (73%), Positives = 33/40 (83%), Gaps = 0/40 (0%) Query 12 DVEPLADSTASQARRVVAAYANDADECRIFLSMLGIGPAK 51 D+EP+ D TA QARRVVAAYA DADECR+ LSMLGI P + Sbjct 14 DLEPVTDETAHQARRVVAAYATDADECRMLLSMLGIAPGE 53 >gi|317509278|ref|ZP_07966899.1| hypothetical protein HMPREF9336_03271 [Segniliparus rugosus ATCC BAA-974] gi|316252488|gb|EFV11937.1| hypothetical protein HMPREF9336_03271 [Segniliparus rugosus ATCC BAA-974] Length=62 Score = 65.1 bits (157), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 29/40 (73%), Positives = 33/40 (83%), Gaps = 0/40 (0%) Query 12 DVEPLADSTASQARRVVAAYANDADECRIFLSMLGIGPAK 51 ++EPLAD TA QARRVVAAYA D DECR L+MLGIGP + Sbjct 19 ELEPLADETALQARRVVAAYAKDVDECRTLLAMLGIGPTQ 58 >gi|343925778|ref|ZP_08765293.1| hypothetical protein GOALK_050_00730 [Gordonia alkanivorans NBRC 16433] gi|343764129|dbj|GAA12219.1| hypothetical protein GOALK_050_00730 [Gordonia alkanivorans NBRC 16433] Length=53 Score = 62.0 bits (149), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 27/40 (68%), Positives = 34/40 (85%), Gaps = 0/40 (0%) Query 12 DVEPLADSTASQARRVVAAYANDADECRIFLSMLGIGPAK 51 ++EP+AD TA+ ARRVVAAYA DADECR+ L+MLGI P + Sbjct 12 ELEPVADETANSARRVVAAYATDADECRMLLAMLGIAPGE 51 >gi|262200808|ref|YP_003272016.1| hypothetical protein Gbro_0809 [Gordonia bronchialis DSM 43247] gi|262084155|gb|ACY20123.1| hypothetical protein Gbro_0809 [Gordonia bronchialis DSM 43247] Length=54 Score = 60.5 bits (145), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 27/38 (72%), Positives = 32/38 (85%), Gaps = 0/38 (0%) Query 12 DVEPLADSTASQARRVVAAYANDADECRIFLSMLGIGP 49 ++ P+AD TA+ ARRVVAAYA DADECR+ LSMLGI P Sbjct 13 ELAPVADETANSARRVVAAYATDADECRMLLSMLGIAP 50 >gi|226304458|ref|YP_002764416.1| hypothetical protein RER_09690 [Rhodococcus erythropolis PR4] gi|226183573|dbj|BAH31677.1| hypothetical protein RER_09690 [Rhodococcus erythropolis PR4] Length=58 Score = 57.0 bits (136), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 28/44 (64%), Positives = 33/44 (75%), Gaps = 2/44 (4%) Query 9 EIGD--VEPLADSTASQARRVVAAYANDADECRIFLSMLGIGPA 50 EI D +E +A+ TA A+ VVAAYA DADECR+ LSMLGI PA Sbjct 11 EIADEEIETVAEETARMAQHVVAAYAEDADECRMLLSMLGISPA 54 >gi|54022515|ref|YP_116757.1| hypothetical protein nfa5480 [Nocardia farcinica IFM 10152] gi|54014023|dbj|BAD55393.1| hypothetical protein [Nocardia farcinica IFM 10152] Length=56 Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 34/51 (67%), Positives = 39/51 (77%), Gaps = 2/51 (3%) Query 1 MSTKSDHGEIGD--VEPLADSTASQARRVVAAYANDADECRIFLSMLGIGP 49 M+ K +I D +EPLAD TA QA+RVVAAYA DADECR+ LSMLGIGP Sbjct 1 MAAKGSANDIADEDLEPLADETARQAQRVVAAYAADADECRMLLSMLGIGP 51 >gi|331699939|ref|YP_004336178.1| hypothetical protein Psed_6224 [Pseudonocardia dioxanivorans CB1190] gi|326954628|gb|AEA28325.1| hypothetical protein Psed_6224 [Pseudonocardia dioxanivorans CB1190] Length=63 Score = 40.4 bits (93), Expect = 0.099, Method: Compositional matrix adjust. Identities = 25/50 (50%), Positives = 31/50 (62%), Gaps = 4/50 (8%) Query 2 STKSDHGEIGDVE-PLADSTASQAR---RVVAAYANDADECRIFLSMLGI 47 S + GE D + L DS A+Q R RVVAA A DAD+CR L+MLG+ Sbjct 8 SNRVAAGEWADAQIALRDSCAAQDRQAVRVVAAQATDADDCRELLAMLGL 57 >gi|227541011|ref|ZP_03971060.1| conserved hypothetical protein [Corynebacterium glucuronolyticum ATCC 51866] gi|227183271|gb|EEI64243.1| conserved hypothetical protein [Corynebacterium glucuronolyticum ATCC 51866] Length=129 Score = 36.2 bits (82), Expect = 1.6, Method: Compositional matrix adjust. Identities = 17/36 (48%), Positives = 24/36 (67%), Gaps = 0/36 (0%) Query 14 EPLADSTASQARRVVAAYANDADECRIFLSMLGIGP 49 + L + TA+ ARRVVA+Y+ D + + SMLGI P Sbjct 20 QQLEEETATAARRVVASYSEDYHDAVMLSSMLGITP 55 >gi|227489417|ref|ZP_03919733.1| conserved hypothetical protein [Corynebacterium glucuronolyticum ATCC 51867] gi|227090595|gb|EEI25907.1| conserved hypothetical protein [Corynebacterium glucuronolyticum ATCC 51867] Length=125 Score = 36.2 bits (82), Expect = 1.6, Method: Compositional matrix adjust. Identities = 17/36 (48%), Positives = 24/36 (67%), Gaps = 0/36 (0%) Query 14 EPLADSTASQARRVVAAYANDADECRIFLSMLGIGP 49 + L + TA+ ARRVVA+Y+ D + + SMLGI P Sbjct 20 QQLEEETATAARRVVASYSEDYHDAVMLSSMLGITP 55 >gi|227502099|ref|ZP_03932148.1| conserved hypothetical protein [Corynebacterium accolens ATCC 49725] gi|306836872|ref|ZP_07469828.1| conserved hypothetical protein [Corynebacterium accolens ATCC 49726] gi|227077158|gb|EEI15121.1| conserved hypothetical protein [Corynebacterium accolens ATCC 49725] gi|304567244|gb|EFM42853.1| conserved hypothetical protein [Corynebacterium accolens ATCC 49726] Length=118 Score = 35.8 bits (81), Expect = 2.2, Method: Compositional matrix adjust. Identities = 18/37 (49%), Positives = 23/37 (63%), Gaps = 0/37 (0%) Query 16 LADSTASQARRVVAAYANDADECRIFLSMLGIGPAKL 52 LA+ TA ARRVVA Y+ D + +SMLG+ P L Sbjct 18 LAEETARAARRVVATYSQDFLDGVTLMSMLGVEPKGL 54 >gi|227834023|ref|YP_002835730.1| hypothetical protein cauri_2201 [Corynebacterium aurimucosum ATCC 700975] gi|262183491|ref|ZP_06042912.1| hypothetical protein CaurA7_05814 [Corynebacterium aurimucosum ATCC 700975] gi|227455039|gb|ACP33792.1| hypothetical protein cauri_2201 [Corynebacterium aurimucosum ATCC 700975] Length=119 Score = 35.4 bits (80), Expect = 2.5, Method: Compositional matrix adjust. Identities = 21/51 (42%), Positives = 27/51 (53%), Gaps = 7/51 (13%) Query 9 EIGDVEPLADST-------ASQARRVVAAYANDADECRIFLSMLGIGPAKL 52 ++ D +P AD T A ARRVVA YA D + +SMLG+ P L Sbjct 4 KVTDTQPAADQTHAVEEETARAARRVVATYAEDFLDGVTLMSMLGVEPEGL 54 >gi|226360425|ref|YP_002778203.1| hypothetical protein ROP_10110 [Rhodococcus opacus B4] gi|226238910|dbj|BAH49258.1| hypothetical protein [Rhodococcus opacus B4] Length=84 Score = 35.4 bits (80), Expect = 2.8, Method: Compositional matrix adjust. Identities = 16/25 (64%), Positives = 21/25 (84%), Gaps = 0/25 (0%) Query 23 QARRVVAAYANDADECRIFLSMLGI 47 +A+RVVAA + DA +CR+ LSMLGI Sbjct 50 RAQRVVAAQSLDAADCRMLLSMLGI 74 >gi|188989998|ref|YP_001902008.1| hypothetical protein xccb100_0603 [Xanthomonas campestris pv. campestris str. B100] gi|167731758|emb|CAP49938.1| conserved hypothetical protein [Xanthomonas campestris pv. campestris] Length=438 Score = 35.0 bits (79), Expect = 3.2, Method: Compositional matrix adjust. Identities = 15/41 (37%), Positives = 25/41 (61%), Gaps = 0/41 (0%) Query 14 EPLADSTASQARRVVAAYANDADECRIFLSMLGIGPAKLES 54 +P A A Q +R++ Y +D DE R +++LG GP L++ Sbjct 242 DPQARQLADQNKRMINEYRSDLDEIRAGITLLGRGPGGLQT 282 >gi|341938649|gb|AEL08788.1| lipase family [Xanthomonas campestris pv. raphani 756C] Length=438 Score = 35.0 bits (79), Expect = 3.3, Method: Compositional matrix adjust. Identities = 15/41 (37%), Positives = 25/41 (61%), Gaps = 0/41 (0%) Query 14 EPLADSTASQARRVVAAYANDADECRIFLSMLGIGPAKLES 54 +P A A Q +R++ Y +D DE R +++LG GP L++ Sbjct 242 DPQARQLADQNKRMINEYRSDLDEIRAGITLLGRGPGGLQT 282 >gi|227506349|ref|ZP_03936398.1| histone H1 [Corynebacterium striatum ATCC 6940] gi|227197061|gb|EEI77109.1| histone H1 [Corynebacterium striatum ATCC 6940] Length=115 Score = 35.0 bits (79), Expect = 3.8, Method: Compositional matrix adjust. Identities = 20/51 (40%), Positives = 27/51 (53%), Gaps = 7/51 (13%) Query 9 EIGDVEPLADST-------ASQARRVVAAYANDADECRIFLSMLGIGPAKL 52 ++ D +P AD T A ARR+VA YA D + +SMLG+ P L Sbjct 4 KVTDTQPAADQTNAVEEETARAARRIVATYAEDFLDGVTLMSMLGVEPEGL 54 Lambda K H 0.313 0.128 0.352 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 129833220654 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40