BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv3492c Length=160 Score E Sequences producing significant alignments: (Bits) Value gi|15610628|ref|NP_218009.1| Mce associated protein [Mycobacteri... 327 4e-88 gi|289747322|ref|ZP_06506700.1| mce-associated protein [Mycobact... 320 5e-86 gi|296166526|ref|ZP_06848957.1| MCE-associated protein [Mycobact... 236 6e-61 gi|240170047|ref|ZP_04748706.1| hypothetical MCE associated prot... 229 7e-59 gi|254821778|ref|ZP_05226779.1| hypothetical protein MintA_17732... 224 3e-57 gi|41406669|ref|NP_959505.1| hypothetical protein MAP0571 [Mycob... 224 5e-57 gi|336458376|gb|EGO37352.1| Macrophage killing protein, conjugat... 223 5e-57 gi|118466733|ref|YP_879943.1| hypothetical protein MAV_0664 [Myc... 222 1e-56 gi|342862231|ref|ZP_08718873.1| hypothetical protein MCOL_25196 ... 222 2e-56 gi|118619245|ref|YP_907577.1| MCE-associated protein [Mycobacter... 219 1e-55 gi|183984948|ref|YP_001853239.1| MCE-associated protein [Mycobac... 218 2e-55 gi|145222155|ref|YP_001132833.1| hypothetical protein Mflv_1563 ... 210 7e-53 gi|118470497|ref|YP_890119.1| hypothetical protein MSMEG_5893 [M... 207 4e-52 gi|120406143|ref|YP_955972.1| hypothetical protein Mvan_5195 [My... 206 7e-52 gi|108801573|ref|YP_641770.1| hypothetical protein Mmcs_4610 [My... 194 5e-48 gi|126437557|ref|YP_001073248.1| hypothetical protein Mjls_4993 ... 179 2e-43 gi|169631224|ref|YP_001704873.1| MCE-family protein [Mycobacteri... 166 1e-39 gi|333992263|ref|YP_004524877.1| MCE-associated protein [Mycobac... 161 3e-38 gi|54022511|ref|YP_116753.1| hypothetical protein nfa5440 [Nocar... 89.4 2e-16 gi|333918562|ref|YP_004492143.1| hypothetical protein AS9A_0891 ... 80.9 5e-14 gi|296179488|gb|ADG96493.1| hypothetical protein [Gordonia chole... 78.2 4e-13 gi|111019736|ref|YP_702708.1| hypothetical protein RHA1_ro02745 ... 78.2 4e-13 gi|126436735|ref|YP_001072426.1| hypothetical protein Mjls_4163 ... 73.6 1e-11 gi|336178575|ref|YP_004583950.1| hypothetical protein FsymDg_267... 73.2 1e-11 gi|226306849|ref|YP_002766809.1| hypothetical protein RER_33620 ... 71.6 3e-11 gi|229492738|ref|ZP_04386539.1| conserved hypothetical protein [... 71.6 3e-11 gi|333989715|ref|YP_004522329.1| Mce associated membrane protein... 70.9 7e-11 gi|254820128|ref|ZP_05225129.1| hypothetical protein MintA_09386... 70.5 8e-11 gi|226349628|ref|YP_002776742.1| hypothetical membrane protein [... 70.1 9e-11 gi|108798501|ref|YP_638698.1| hypothetical protein Mmcs_1531 [My... 68.9 2e-10 gi|229494485|ref|ZP_04388248.1| twin-arginine translocation path... 68.9 2e-10 gi|226304456|ref|YP_002764414.1| hypothetical protein RER_09670 ... 68.6 3e-10 gi|312138217|ref|YP_004005553.1| mce associated protein mas2b [R... 68.6 3e-10 gi|325674877|ref|ZP_08154564.1| hypothetical protein HMPREF0724_... 68.6 3e-10 gi|111021677|ref|YP_704649.1| hypothetical protein RHA1_ro04705 ... 68.2 3e-10 gi|342857621|ref|ZP_08714277.1| hypothetical protein MCOL_02055 ... 68.2 4e-10 gi|108801051|ref|YP_641248.1| hypothetical protein Mmcs_4087 [My... 66.2 2e-09 gi|226361927|ref|YP_002779705.1| hypothetical protein ROP_25130 ... 65.5 3e-09 gi|226364214|ref|YP_002781996.1| hypothetical protein ROP_48040 ... 65.1 3e-09 gi|296171129|ref|ZP_06852581.1| twin-arginine translocation path... 65.1 4e-09 gi|84494800|ref|ZP_00993919.1| hypothetical protein JNB_08379 [J... 64.7 4e-09 gi|315443571|ref|YP_004076450.1| hypothetical protein Mspyr1_195... 63.9 8e-09 gi|120401933|ref|YP_951762.1| hypothetical protein Mvan_0918 [My... 63.5 1e-08 gi|145223114|ref|YP_001133792.1| hypothetical protein Mflv_2527 ... 63.2 1e-08 gi|226364094|ref|YP_002781876.1| hypothetical protein ROP_46840 ... 61.6 4e-08 gi|118473894|ref|YP_889453.1| hypothetical protein MSMEG_5207 [M... 60.5 9e-08 gi|226361929|ref|YP_002779707.1| hypothetical protein ROP_25150 ... 59.7 1e-07 gi|315443160|ref|YP_004076039.1| hypothetical protein Mspyr1_153... 59.3 2e-07 gi|240171813|ref|ZP_04750472.1| hypothetical protein MkanA1_2103... 58.9 2e-07 gi|108800619|ref|YP_640816.1| twin-arginine translocation pathwa... 58.5 3e-07 >gi|15610628|ref|NP_218009.1| Mce associated protein [Mycobacterium tuberculosis H37Rv] gi|15843104|ref|NP_338141.1| hypothetical protein MT3596 [Mycobacterium tuberculosis CDC1551] gi|31794668|ref|NP_857161.1| Mce associated protein [Mycobacterium bovis AF2122/97] 78 more sequence titles Length=160 Score = 327 bits (838), Expect = 4e-88, Method: Compositional matrix adjust. Identities = 160/160 (100%), Positives = 160/160 (100%), Gaps = 0/160 (0%) Query 1 MRRLISVAYALMVATIVGLSAAGGWFYWDRVQTGGEASARALLPKLAMQEIPQVFGYDYQ 60 MRRLISVAYALMVATIVGLSAAGGWFYWDRVQTGGEASARALLPKLAMQEIPQVFGYDYQ Sbjct 1 MRRLISVAYALMVATIVGLSAAGGWFYWDRVQTGGEASARALLPKLAMQEIPQVFGYDYQ 60 Query 61 TVERSLTAVYPLLTPDYRQEFQKSANAQIIPEAKKREVVVQANVVGVGVMDAKRDCASVM 120 TVERSLTAVYPLLTPDYRQEFQKSANAQIIPEAKKREVVVQANVVGVGVMDAKRDCASVM Sbjct 61 TVERSLTAVYPLLTPDYRQEFQKSANAQIIPEAKKREVVVQANVVGVGVMDAKRDCASVM 120 Query 121 VYLNRTVTDKTRQPLYDGSRLRVDFQRIDGKWLIAYITPI 160 VYLNRTVTDKTRQPLYDGSRLRVDFQRIDGKWLIAYITPI Sbjct 121 VYLNRTVTDKTRQPLYDGSRLRVDFQRIDGKWLIAYITPI 160 >gi|289747322|ref|ZP_06506700.1| mce-associated protein [Mycobacterium tuberculosis 02_1987] gi|289687850|gb|EFD55338.1| mce-associated protein [Mycobacterium tuberculosis 02_1987] Length=157 Score = 320 bits (820), Expect = 5e-86, Method: Compositional matrix adjust. Identities = 156/157 (99%), Positives = 157/157 (100%), Gaps = 0/157 (0%) Query 4 LISVAYALMVATIVGLSAAGGWFYWDRVQTGGEASARALLPKLAMQEIPQVFGYDYQTVE 63 +ISVAYALMVATIVGLSAAGGWFYWDRVQTGGEASARALLPKLAMQEIPQVFGYDYQTVE Sbjct 1 MISVAYALMVATIVGLSAAGGWFYWDRVQTGGEASARALLPKLAMQEIPQVFGYDYQTVE 60 Query 64 RSLTAVYPLLTPDYRQEFQKSANAQIIPEAKKREVVVQANVVGVGVMDAKRDCASVMVYL 123 RSLTAVYPLLTPDYRQEFQKSANAQIIPEAKKREVVVQANVVGVGVMDAKRDCASVMVYL Sbjct 61 RSLTAVYPLLTPDYRQEFQKSANAQIIPEAKKREVVVQANVVGVGVMDAKRDCASVMVYL 120 Query 124 NRTVTDKTRQPLYDGSRLRVDFQRIDGKWLIAYITPI 160 NRTVTDKTRQPLYDGSRLRVDFQRIDGKWLIAYITPI Sbjct 121 NRTVTDKTRQPLYDGSRLRVDFQRIDGKWLIAYITPI 157 >gi|296166526|ref|ZP_06848957.1| MCE-associated protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295898138|gb|EFG77713.1| MCE-associated protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length=163 Score = 236 bits (603), Expect = 6e-61, Method: Compositional matrix adjust. Identities = 125/159 (79%), Positives = 139/159 (88%), Gaps = 0/159 (0%) Query 2 RRLISVAYALMVATIVGLSAAGGWFYWDRVQTGGEASARALLPKLAMQEIPQVFGYDYQT 61 RRL+ V L+ +GLSAAGGWFYW RVQ GE +ARA+LP LA +EIPQVF YDYQT Sbjct 5 RRLLVVTGCLLALVFIGLSAAGGWFYWARVQARGEQAARAVLPALATKEIPQVFAYDYQT 64 Query 62 VERSLTAVYPLLTPDYRQEFQKSANAQIIPEAKKREVVVQANVVGVGVMDAKRDCASVMV 121 VERSL+ YPLLTPDYRQEF+KSANAQIIPEAKKREVVVQA+VVGVGVM AKRD ASVMV Sbjct 65 VERSLSDAYPLLTPDYRQEFRKSANAQIIPEAKKREVVVQASVVGVGVMSAKRDSASVMV 124 Query 122 YLNRTVTDKTRQPLYDGSRLRVDFQRIDGKWLIAYITPI 160 Y+NRTVTDK+RQPLYDGSRLRVDF++ID +WLIAYITPI Sbjct 125 YMNRTVTDKSRQPLYDGSRLRVDFKKIDKQWLIAYITPI 163 >gi|240170047|ref|ZP_04748706.1| hypothetical MCE associated protein [Mycobacterium kansasii ATCC 12478] Length=166 Score = 229 bits (585), Expect = 7e-59, Method: Compositional matrix adjust. Identities = 124/159 (78%), Positives = 140/159 (89%), Gaps = 0/159 (0%) Query 2 RRLISVAYALMVATIVGLSAAGGWFYWDRVQTGGEASARALLPKLAMQEIPQVFGYDYQT 61 R L +VA L+VA IVGL+AAGGWFYWDRV+T GE ARA LPK+A +IP+VF YDYQT Sbjct 8 RALGAVAGVLLVAAIVGLAAAGGWFYWDRVETTGERIARAELPKVAADQIPKVFAYDYQT 67 Query 62 VERSLTAVYPLLTPDYRQEFQKSANAQIIPEAKKREVVVQANVVGVGVMDAKRDCASVMV 121 VERSL YP LTPDYRQEF++SANAQIIPEAKKREVVVQA+VVGVGVM +R+ ASVMV Sbjct 68 VERSLNDAYPFLTPDYRQEFKRSANAQIIPEAKKREVVVQASVVGVGVMSVQRNSASVMV 127 Query 122 YLNRTVTDKTRQPLYDGSRLRVDFQRIDGKWLIAYITPI 160 Y+NRTVTDK+RQPLYDGSRLRVD++RIDGKWLIAYITPI Sbjct 128 YMNRTVTDKSRQPLYDGSRLRVDYKRIDGKWLIAYITPI 166 >gi|254821778|ref|ZP_05226779.1| hypothetical protein MintA_17732 [Mycobacterium intracellulare ATCC 13950] Length=163 Score = 224 bits (571), Expect = 3e-57, Method: Compositional matrix adjust. Identities = 121/159 (77%), Positives = 136/159 (86%), Gaps = 0/159 (0%) Query 2 RRLISVAYALMVATIVGLSAAGGWFYWDRVQTGGEASARALLPKLAMQEIPQVFGYDYQT 61 R L+ VA L+ VGLSAA GW YWDRV+ GE +ARA+LP LA +EIP+VF YDYQT Sbjct 5 RWLLIVAGYLLAVAFVGLSAAAGWMYWDRVEVRGEQAARAVLPGLAAKEIPEVFAYDYQT 64 Query 62 VERSLTAVYPLLTPDYRQEFQKSANAQIIPEAKKREVVVQANVVGVGVMDAKRDCASVMV 121 VERSL+A YPLLTPDYR EFQKSAN QIIPEAKKREVVVQANVVGVGVM A+R+ ASVMV Sbjct 65 VERSLSAAYPLLTPDYRAEFQKSANTQIIPEAKKREVVVQANVVGVGVMSAQRNSASVMV 124 Query 122 YLNRTVTDKTRQPLYDGSRLRVDFQRIDGKWLIAYITPI 160 Y+NRTVTDK+RQPLYDGSRLRVDF++I +WLIAYITPI Sbjct 125 YMNRTVTDKSRQPLYDGSRLRVDFKKIGKQWLIAYITPI 163 >gi|41406669|ref|NP_959505.1| hypothetical protein MAP0571 [Mycobacterium avium subsp. paratuberculosis K-10] gi|41395018|gb|AAS02888.1| hypothetical protein MAP_0571 [Mycobacterium avium subsp. paratuberculosis K-10] Length=164 Score = 224 bits (570), Expect = 5e-57, Method: Compositional matrix adjust. Identities = 122/159 (77%), Positives = 135/159 (85%), Gaps = 0/159 (0%) Query 2 RRLISVAYALMVATIVGLSAAGGWFYWDRVQTGGEASARALLPKLAMQEIPQVFGYDYQT 61 RRL+ VA L+ VGLSA G YWDRVQT GE +ARA+LP LA +EIP+VF YDYQT Sbjct 6 RRLLVVAGYLLAVAFVGLSAVAGAMYWDRVQTRGEQAARAVLPGLAAKEIPEVFAYDYQT 65 Query 62 VERSLTAVYPLLTPDYRQEFQKSANAQIIPEAKKREVVVQANVVGVGVMDAKRDCASVMV 121 VERSL+A YPLLTPDYR EFQKS N QIIPEAKKREVVVQANVVGVGVM A+RD ASVMV Sbjct 66 VERSLSAAYPLLTPDYRAEFQKSVNNQIIPEAKKREVVVQANVVGVGVMSAQRDSASVMV 125 Query 122 YLNRTVTDKTRQPLYDGSRLRVDFQRIDGKWLIAYITPI 160 Y+NRTVTDK+RQPLYDGSRLRVDF++I +WLIAYITPI Sbjct 126 YMNRTVTDKSRQPLYDGSRLRVDFKKIGKQWLIAYITPI 164 >gi|336458376|gb|EGO37352.1| Macrophage killing protein, conjugation-like protein [Mycobacterium avium subsp. paratuberculosis S397] Length=163 Score = 223 bits (569), Expect = 5e-57, Method: Compositional matrix adjust. Identities = 122/159 (77%), Positives = 135/159 (85%), Gaps = 0/159 (0%) Query 2 RRLISVAYALMVATIVGLSAAGGWFYWDRVQTGGEASARALLPKLAMQEIPQVFGYDYQT 61 RRL+ VA L+ VGLSA G YWDRVQT GE +ARA+LP LA +EIP+VF YDYQT Sbjct 5 RRLLVVAGYLLAVAFVGLSAVAGAMYWDRVQTRGEQAARAVLPGLAAKEIPEVFAYDYQT 64 Query 62 VERSLTAVYPLLTPDYRQEFQKSANAQIIPEAKKREVVVQANVVGVGVMDAKRDCASVMV 121 VERSL+A YPLLTPDYR EFQKS N QIIPEAKKREVVVQANVVGVGVM A+RD ASVMV Sbjct 65 VERSLSAAYPLLTPDYRAEFQKSVNNQIIPEAKKREVVVQANVVGVGVMSAQRDSASVMV 124 Query 122 YLNRTVTDKTRQPLYDGSRLRVDFQRIDGKWLIAYITPI 160 Y+NRTVTDK+RQPLYDGSRLRVDF++I +WLIAYITPI Sbjct 125 YMNRTVTDKSRQPLYDGSRLRVDFKKIGKQWLIAYITPI 163 >gi|118466733|ref|YP_879943.1| hypothetical protein MAV_0664 [Mycobacterium avium 104] gi|254773620|ref|ZP_05215136.1| hypothetical protein MaviaA2_02945 [Mycobacterium avium subsp. avium ATCC 25291] gi|118168020|gb|ABK68917.1| conserved hypothetical protein [Mycobacterium avium 104] Length=163 Score = 222 bits (566), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 121/159 (77%), Positives = 134/159 (85%), Gaps = 0/159 (0%) Query 2 RRLISVAYALMVATIVGLSAAGGWFYWDRVQTGGEASARALLPKLAMQEIPQVFGYDYQT 61 RRL+ A L+ VGLSA G YWDRVQT GE +ARA+LP LA +EIP+VF YDYQT Sbjct 5 RRLLVAAGYLLAVAFVGLSAVAGAMYWDRVQTRGEQAARAVLPGLAAKEIPEVFAYDYQT 64 Query 62 VERSLTAVYPLLTPDYRQEFQKSANAQIIPEAKKREVVVQANVVGVGVMDAKRDCASVMV 121 VERSL+A YPLLTPDYR EFQKS N QIIPEAKKREVVVQANVVGVGVM A+RD ASVMV Sbjct 65 VERSLSAAYPLLTPDYRAEFQKSVNNQIIPEAKKREVVVQANVVGVGVMSAQRDSASVMV 124 Query 122 YLNRTVTDKTRQPLYDGSRLRVDFQRIDGKWLIAYITPI 160 Y+NRTVTDK+RQPLYDGSRLRVDF++I +WLIAYITPI Sbjct 125 YMNRTVTDKSRQPLYDGSRLRVDFKKIGKQWLIAYITPI 163 >gi|342862231|ref|ZP_08718873.1| hypothetical protein MCOL_25196 [Mycobacterium colombiense CECT 3035] gi|342130309|gb|EGT83629.1| hypothetical protein MCOL_25196 [Mycobacterium colombiense CECT 3035] Length=166 Score = 222 bits (565), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 120/159 (76%), Positives = 134/159 (85%), Gaps = 0/159 (0%) Query 2 RRLISVAYALMVATIVGLSAAGGWFYWDRVQTGGEASARALLPKLAMQEIPQVFGYDYQT 61 R L+ VA L+ VGLSA GW YWDRVQT GE ARA+LP A +EIP+VF YDYQT Sbjct 8 RWLLIVAGYLVAVAFVGLSAVAGWMYWDRVQTRGEQEARAVLPAKAAKEIPEVFAYDYQT 67 Query 62 VERSLTAVYPLLTPDYRQEFQKSANAQIIPEAKKREVVVQANVVGVGVMDAKRDCASVMV 121 VERSL+A YPLLTPDYR EFQKSAN QIIPEAKKREVVVQANVVGVGVM AKR+ ASVMV Sbjct 68 VERSLSAAYPLLTPDYRAEFQKSANNQIIPEAKKREVVVQANVVGVGVMSAKRESASVMV 127 Query 122 YLNRTVTDKTRQPLYDGSRLRVDFQRIDGKWLIAYITPI 160 ++NRTVTDK+RQPLYDGSRLRVDF+++ +WLIAYITPI Sbjct 128 FMNRTVTDKSRQPLYDGSRLRVDFKKVGKQWLIAYITPI 166 >gi|118619245|ref|YP_907577.1| MCE-associated protein [Mycobacterium ulcerans Agy99] gi|118571355|gb|ABL06106.1| conserved MCE-associated protein [Mycobacterium ulcerans Agy99] Length=166 Score = 219 bits (557), Expect = 1e-55, Method: Compositional matrix adjust. Identities = 125/159 (79%), Positives = 142/159 (90%), Gaps = 0/159 (0%) Query 2 RRLISVAYALMVATIVGLSAAGGWFYWDRVQTGGEASARALLPKLAMQEIPQVFGYDYQT 61 R +I+VA +++ IVGL+A GGWFYWDRV+ GEA+ARA+LP LA ++IP VFGYDYQT Sbjct 8 RWVITVAASMLAVVIVGLAALGGWFYWDRVEARGEAAARAVLPGLAAKDIPLVFGYDYQT 67 Query 62 VERSLTAVYPLLTPDYRQEFQKSANAQIIPEAKKREVVVQANVVGVGVMDAKRDCASVMV 121 VERSL A YPLLTP YR+EF+KSANAQIIPEAKKREVVVQANVVGVGVM AKR+ ASVMV Sbjct 68 VERSLNAAYPLLTPAYREEFEKSANAQIIPEAKKREVVVQANVVGVGVMAAKRNSASVMV 127 Query 122 YLNRTVTDKTRQPLYDGSRLRVDFQRIDGKWLIAYITPI 160 YLNRTVTDK+RQPLYDGSRLRVD++RI GKWLIAYITPI Sbjct 128 YLNRTVTDKSRQPLYDGSRLRVDYKRIGGKWLIAYITPI 166 >gi|183984948|ref|YP_001853239.1| MCE-associated protein [Mycobacterium marinum M] gi|183178274|gb|ACC43384.1| conserved MCE-associated protein [Mycobacterium marinum M] Length=166 Score = 218 bits (555), Expect = 2e-55, Method: Compositional matrix adjust. Identities = 125/159 (79%), Positives = 142/159 (90%), Gaps = 0/159 (0%) Query 2 RRLISVAYALMVATIVGLSAAGGWFYWDRVQTGGEASARALLPKLAMQEIPQVFGYDYQT 61 R +I+VA +++ IVGL+A GGWFYWDRV+ GEA+ARA+LP LA ++IP VFGYDYQT Sbjct 8 RWVITVAASMLAIVIVGLAALGGWFYWDRVEARGEAAARAVLPGLAAKDIPLVFGYDYQT 67 Query 62 VERSLTAVYPLLTPDYRQEFQKSANAQIIPEAKKREVVVQANVVGVGVMDAKRDCASVMV 121 VERSL A YPLLTP YR+EF+KSANAQIIPEAKKREVVVQANVVGVGVM AKR+ ASVMV Sbjct 68 VERSLNAAYPLLTPAYREEFEKSANAQIIPEAKKREVVVQANVVGVGVMAAKRNSASVMV 127 Query 122 YLNRTVTDKTRQPLYDGSRLRVDFQRIDGKWLIAYITPI 160 YLNRTVTDK+RQPLYDGSRLRVD++RI GKWLIAYITPI Sbjct 128 YLNRTVTDKSRQPLYDGSRLRVDYKRIGGKWLIAYITPI 166 >gi|145222155|ref|YP_001132833.1| hypothetical protein Mflv_1563 [Mycobacterium gilvum PYR-GCK] gi|145214641|gb|ABP44045.1| conserved hypothetical protein [Mycobacterium gilvum PYR-GCK] Length=164 Score = 210 bits (534), Expect = 7e-53, Method: Compositional matrix adjust. Identities = 97/154 (63%), Positives = 123/154 (80%), Gaps = 1/154 (0%) Query 8 AYALMVAT-IVGLSAAGGWFYWDRVQTGGEASARALLPKLAMQEIPQVFGYDYQTVERSL 66 A A+++AT V LSA GGW YW V+ GE ARA LP LA ++IP+VFG+DYQTVERS Sbjct 11 AVAIVLATGFVALSAVGGWLYWKGVELDGEQQARAELPALAEEQIPRVFGFDYQTVERSF 70 Query 67 TAVYPLLTPDYRQEFQKSANAQIIPEAKKREVVVQANVVGVGVMDAKRDCASVMVYLNRT 126 VYP+LTP+YRQEFQ +IIP+A+ RE++ QA+ VG GV+DA R ASVMVY+NRT Sbjct 71 AEVYPMLTPEYRQEFQDRVTNEIIPQARDRELISQAHTVGTGVLDAHRTSASVMVYMNRT 130 Query 127 VTDKTRQPLYDGSRLRVDFQRIDGKWLIAYITPI 160 VTDK+++ +YDGSRLRVD++++DGKWLIAYITPI Sbjct 131 VTDKSKESVYDGSRLRVDYKKVDGKWLIAYITPI 164 >gi|118470497|ref|YP_890119.1| hypothetical protein MSMEG_5893 [Mycobacterium smegmatis str. MC2 155] gi|118171784|gb|ABK72680.1| conserved hypothetical protein [Mycobacterium smegmatis str. MC2 155] Length=161 Score = 207 bits (527), Expect = 4e-52, Method: Compositional matrix adjust. Identities = 94/158 (60%), Positives = 122/158 (78%), Gaps = 0/158 (0%) Query 3 RLISVAYALMVATIVGLSAAGGWFYWDRVQTGGEASARALLPKLAMQEIPQVFGYDYQTV 62 +L+ ++ + LSA GG YW RVQ G+ + RA LP LA+++IP+VFGYDYQTV Sbjct 4 KLVGALVGVLAVAFIALSALGGAMYWSRVQQRGQEATRAELPSLAIEQIPRVFGYDYQTV 63 Query 63 ERSLTAVYPLLTPDYRQEFQKSANAQIIPEAKKREVVVQANVVGVGVMDAKRDCASVMVY 122 ERSL YPLLTP +RQ+F+ A ++IPEA+KRE+VVQ N+VGVGV A+RD SV+VY Sbjct 64 ERSLMETYPLLTPGFRQQFESDAQQKVIPEARKRELVVQINIVGVGVEAAQRDTGSVLVY 123 Query 123 LNRTVTDKTRQPLYDGSRLRVDFQRIDGKWLIAYITPI 160 +NRTVTDK+RQPLYDGSRLRV+++++DGKWLI I PI Sbjct 124 MNRTVTDKSRQPLYDGSRLRVEYRKVDGKWLIDAIKPI 161 >gi|120406143|ref|YP_955972.1| hypothetical protein Mvan_5195 [Mycobacterium vanbaalenii PYR-1] gi|119958961|gb|ABM15966.1| conserved hypothetical protein [Mycobacterium vanbaalenii PYR-1] Length=164 Score = 206 bits (525), Expect = 7e-52, Method: Compositional matrix adjust. Identities = 94/158 (60%), Positives = 121/158 (77%), Gaps = 0/158 (0%) Query 3 RLISVAYALMVATIVGLSAAGGWFYWDRVQTGGEASARALLPKLAMQEIPQVFGYDYQTV 62 +LI+ L+ V LSA GG YW+RV+ GE ARA LP LA Q+IP VFG+DYQTV Sbjct 7 KLIAAIGVLLATGFVALSAVGGALYWNRVELNGEEQARAELPSLAAQQIPLVFGFDYQTV 66 Query 63 ERSLTAVYPLLTPDYRQEFQKSANAQIIPEAKKREVVVQANVVGVGVMDAKRDCASVMVY 122 ER+ VYPLLTP+YR+EFQ +IIP+A+ R+++ QA+ VG G++DA R ASVMVY Sbjct 67 ERTFAEVYPLLTPEYRKEFQDRVTNEIIPQARDRQLISQAHSVGAGILDAHRTSASVMVY 126 Query 123 LNRTVTDKTRQPLYDGSRLRVDFQRIDGKWLIAYITPI 160 +NRTVTDK ++ +YDGSRLRVD++++DGKWLIAYITPI Sbjct 127 MNRTVTDKAKESVYDGSRLRVDYKKVDGKWLIAYITPI 164 >gi|108801573|ref|YP_641770.1| hypothetical protein Mmcs_4610 [Mycobacterium sp. MCS] gi|119870727|ref|YP_940679.1| hypothetical protein Mkms_4698 [Mycobacterium sp. KMS] gi|108771992|gb|ABG10714.1| conserved hypothetical protein [Mycobacterium sp. MCS] gi|119696816|gb|ABL93889.1| conserved hypothetical protein [Mycobacterium sp. KMS] Length=164 Score = 194 bits (492), Expect = 5e-48, Method: Compositional matrix adjust. Identities = 95/158 (61%), Positives = 120/158 (76%), Gaps = 0/158 (0%) Query 3 RLISVAYALMVATIVGLSAAGGWFYWDRVQTGGEASARALLPKLAMQEIPQVFGYDYQTV 62 RL V L V L+A GG +W+RV+T G ARA L LA ++IP+VFGYDYQTV Sbjct 7 RLAGVVSVLCAVVFVALAAVGGLLFWERVETRGAQEARAELAPLAAEQIPKVFGYDYQTV 66 Query 63 ERSLTAVYPLLTPDYRQEFQKSANAQIIPEAKKREVVVQANVVGVGVMDAKRDCASVMVY 122 ERSLT Y +L P++RQEF+ A IIP+A++R+VV QANVVGVGV+DA+RD A VMVY Sbjct 67 ERSLTEAYTMLAPEFRQEFRDRATKDIIPQARERQVVSQANVVGVGVLDAQRDSAQVMVY 126 Query 123 LNRTVTDKTRQPLYDGSRLRVDFQRIDGKWLIAYITPI 160 LNRTVT+K +P+YDGSRLRVD+ ++DG+W+I YITPI Sbjct 127 LNRTVTEKNGKPIYDGSRLRVDYAKVDGRWMIDYITPI 164 >gi|126437557|ref|YP_001073248.1| hypothetical protein Mjls_4993 [Mycobacterium sp. JLS] gi|126237357|gb|ABO00758.1| conserved hypothetical protein [Mycobacterium sp. JLS] Length=164 Score = 179 bits (453), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 93/158 (59%), Positives = 118/158 (75%), Gaps = 0/158 (0%) Query 3 RLISVAYALMVATIVGLSAAGGWFYWDRVQTGGEASARALLPKLAMQEIPQVFGYDYQTV 62 RL V L V L+A GG +W+RV+T G A A L LA +++P+VFGYDYQTV Sbjct 7 RLAGVVSVLCAVAFVALAAVGGSLFWERVETRGAQQAAAELAPLAAEQMPKVFGYDYQTV 66 Query 63 ERSLTAVYPLLTPDYRQEFQKSANAQIIPEAKKREVVVQANVVGVGVMDAKRDCASVMVY 122 ERSLT Y +L P++RQEF+ A IIP+A++R+VV QANVVGVGV+DA+RD A VMVY Sbjct 67 ERSLTEAYAMLAPEFRQEFRDRATKDIIPQARERQVVSQANVVGVGVLDAQRDSAQVMVY 126 Query 123 LNRTVTDKTRQPLYDGSRLRVDFQRIDGKWLIAYITPI 160 LNRTV +K +P+YDGSRLRVD+ ++DG+WLI YITPI Sbjct 127 LNRTVIEKNGKPIYDGSRLRVDYAKVDGRWLIDYITPI 164 >gi|169631224|ref|YP_001704873.1| MCE-family protein [Mycobacterium abscessus ATCC 19977] gi|169243191|emb|CAM64219.1| Hypothetical MCE-family protein [Mycobacterium abscessus] Length=160 Score = 166 bits (419), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 83/160 (52%), Positives = 113/160 (71%), Gaps = 0/160 (0%) Query 1 MRRLISVAYALMVATIVGLSAAGGWFYWDRVQTGGEASARALLPKLAMQEIPQVFGYDYQ 60 MR L + A+ V +VGLSAA G YW RV T +A L K A ++I +FGYDYQ Sbjct 1 MRWLARIFVAVTVLVVVGLSAAAGGMYWHRVDTVASRAAGETLIKQAGKQIGSIFGYDYQ 60 Query 61 TVERSLTAVYPLLTPDYRQEFQKSANAQIIPEAKKREVVVQANVVGVGVMDAKRDCASVM 120 TVERSL Y LTP+YR+EF+ AN +IIP+AK+R++V Q ++VG G++ A RD A V+ Sbjct 61 TVERSLDEQYAGLTPEYRREFEDKANREIIPQAKQRKIVSQTSIVGTGIIAAHRDSAQVV 120 Query 121 VYLNRTVTDKTRQPLYDGSRLRVDFQRIDGKWLIAYITPI 160 VY+NRT+TD++R P+YD S ++VD+ R KWLI+YITP+ Sbjct 121 VYMNRTITDQSRTPVYDSSSIQVDYTRAGDKWLISYITPL 160 >gi|333992263|ref|YP_004524877.1| MCE-associated protein [Mycobacterium sp. JDM601] gi|333488231|gb|AEF37623.1| MCE-associated protein [Mycobacterium sp. JDM601] Length=169 Score = 161 bits (407), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 75/141 (54%), Positives = 105/141 (75%), Gaps = 1/141 (0%) Query 21 AAGGWFYWDRVQTGGEASARALLPKLAMQEIPQVFGYDYQTVERSLTAVYPLLTPDYRQE 80 A G YW+RV+ GE AR L +LA EIP+V GY+Y+TVE SLT +P+ T DYR+E Sbjct 29 ATAGKLYWNRVEARGEQLARTELVELAKAEIPKVLGYEYKTVEGSLTETFPMFTGDYRRE 88 Query 81 FQKSANAQIIPEAKKREVVVQANVVGVGVMDAKRDCASVMVYLNRTVTD-KTRQPLYDGS 139 F+ A IIP+A++R++V Q +V GVGV DAKR SV+V+++RT+T K+++PL++GS Sbjct 89 FEARAINDIIPQARERQLVNQVDVTGVGVQDAKRTAGSVLVFISRTITSGKSKEPLHEGS 148 Query 140 RLRVDFQRIDGKWLIAYITPI 160 RLRVDF+++D KWLI+ I PI Sbjct 149 RLRVDFRKVDSKWLISNIVPI 169 >gi|54022511|ref|YP_116753.1| hypothetical protein nfa5440 [Nocardia farcinica IFM 10152] gi|54014019|dbj|BAD55389.1| hypothetical protein [Nocardia farcinica IFM 10152] Length=162 Score = 89.4 bits (220), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 50/158 (32%), Positives = 84/158 (54%), Gaps = 7/158 (4%) Query 4 LISVAYALMVATIVGLSAAGGWFYWDRVQTGGEASARALLPKLAMQEIPQVFGYDYQTVE 63 ++ A AL ++G GGW +W Q + AR A + + +F YD+ TV+ Sbjct 11 FLAGAVALTALIVIGF---GGWRHWSSEQ---DEKAREQALTAADRAVSAMFTYDHTTVD 64 Query 64 RSLTAVYPLLTPDYRQEFQKSANAQIIPEAKKREVVVQANVVGVGVMDAKRDCASVMVYL 123 L L+P +R+++ K A I P AK++++ V+A G++ A RD A VM++L Sbjct 65 TELPKAADNLSPSFREDYLKLITAAIAPGAKEKQLTVKATTQAAGIVSADRDNAVVMLFL 124 Query 124 NR-TVTDKTRQPLYDGSRLRVDFQRIDGKWLIAYITPI 160 N+ T + + Q GSR+RV+ + +WL+ +TPI Sbjct 125 NQVTTSSDSPQGTTTGSRVRVNLNKDGDRWLVDAVTPI 162 >gi|333918562|ref|YP_004492143.1| hypothetical protein AS9A_0891 [Amycolicicoccus subflavus DQS3-9A1] gi|333480783|gb|AEF39343.1| hypothetical protein AS9A_0891 [Amycolicicoccus subflavus DQS3-9A1] Length=160 Score = 80.9 bits (198), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 50/158 (32%), Positives = 88/158 (56%), Gaps = 5/158 (3%) Query 4 LISVAYALMVATIVGLSAAGGWFYWDRVQTGGEASARALLPKLAMQEIPQVFGYDYQTVE 63 LI+V ++VA ++ L A G+ W+ T +A +A+ + A ++ + GYD+ TVE Sbjct 7 LITVVAGVLVA-MIALVAFLGYRVWED-NTSEQAREQAV--RAASEQAVAILGYDHNTVE 62 Query 64 RSLTAVYPLLTPDYRQEFQKSANAQIIPEAKKREVVVQANVVGVGVMDAKRDCASVMVYL 123 L LT +R E++ IIP A ++E+ V +V G ++ A +D A V+++L Sbjct 63 TELPTAAEGLTGSFRDEYETLIREAIIPGALEQELSVDVSVAGTSIVSATKDTAVVLLFL 122 Query 124 NR-TVTDKTRQPLYDGSRLRVDFQRIDGKWLIAYITPI 160 N+ T + ++ Q GSR+R ++ +WL+A +TPI Sbjct 123 NQVTTSSESPQAALTGSRVRAHMEKSGEQWLMAGLTPI 160 >gi|296179488|gb|ADG96493.1| hypothetical protein [Gordonia cholesterolivorans] Length=159 Score = 78.2 bits (191), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 40/116 (35%), Positives = 69/116 (60%), Gaps = 2/116 (1%) Query 47 AMQEIPQVFGYDYQTVERSL-TAVYPLLTPDYRQEFQKSANAQIIPEAKKREVVVQANVV 105 A +++PQ+ YDY+T++++ A LLT + E+ + + I P AK+ ++V +A VV Sbjct 44 ARRDVPQLLSYDYRTIDQAFPEAAKTLLTGKFLTEYTELGASVIQPAAKRDDIVTKAEVV 103 Query 106 GVGVMDAKRDCASVMVYLNRTVTDKTRQ-PLYDGSRLRVDFQRIDGKWLIAYITPI 160 V+ AK D +V++++N+T T K + P DGSR+RVD + W I+ P+ Sbjct 104 EASVVSAKADAVTVLLFVNQTTTSKGMEGPRLDGSRVRVDLTKDGDSWKISEFVPV 159 >gi|111019736|ref|YP_702708.1| hypothetical protein RHA1_ro02745 [Rhodococcus jostii RHA1] gi|110819266|gb|ABG94550.1| conserved hypothetical protein [Rhodococcus jostii RHA1] Length=201 Score = 78.2 bits (191), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 39/112 (35%), Positives = 66/112 (59%), Gaps = 1/112 (0%) Query 50 EIPQVFGYDYQTVERSLTAVYPLLTPDYRQEFQKSANAQIIPEAKKREVVVQANVVGVGV 109 +IP V Y++ +++ ++ LT +R +F + A I+P A+ +V +A VV V Sbjct 90 KIPAVLSYEFGSLDDEFSSATTNLTGPFRDDFAELARTVIVPAARADSIVTKAEVVESSV 149 Query 110 MDAKRDCASVMVYLNR-TVTDKTRQPLYDGSRLRVDFQRIDGKWLIAYITPI 160 +DA D +V+++LN+ T + K + P DGSR+ V+ I G WLI+ ITP+ Sbjct 150 VDATSDKVTVLMFLNQNTTSTKLQAPRLDGSRVTVEMTPIAGDWLISGITPV 201 >gi|126436735|ref|YP_001072426.1| hypothetical protein Mjls_4163 [Mycobacterium sp. JLS] gi|126236535|gb|ABN99935.1| hypothetical protein Mjls_4163 [Mycobacterium sp. JLS] Length=230 Score = 73.6 bits (179), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 45/143 (32%), Positives = 69/143 (49%), Gaps = 2/143 (1%) Query 19 LSAAGGWFYW-DRVQTGGEASARALLPKLAMQEIPQVFGYDYQTVERSLTAVYPLLTPDY 77 L+ G+ W D T E AR ++A + Y T ER LTA LT + Sbjct 89 LTLVAGFLKWQDTAATQAEV-ARIETVQVAKDATVALLSYKPDTAERELTAARDRLTGSF 147 Query 78 RQEFQKSANAQIIPEAKKREVVVQANVVGVGVMDAKRDCASVMVYLNRTVTDKTRQPLYD 137 R + + N +IP AK++++ A V G + A D A VMV++N+TV P Sbjct 148 RDSYSQLTNEVVIPGAKQKQISATATVPAAGSVSADADHAVVMVFVNQTVIVGKDAPTDT 207 Query 138 GSRLRVDFQRIDGKWLIAYITPI 160 S +R+ +++D +WLI+ PI Sbjct 208 ASAVRISMEKVDNRWLISGFDPI 230 >gi|336178575|ref|YP_004583950.1| hypothetical protein FsymDg_2676 [Frankia symbiont of Datisca glomerata] gi|334859555|gb|AEH10029.1| hypothetical protein FsymDg_2676 [Frankia symbiont of Datisca glomerata] Length=231 Score = 73.2 bits (178), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 35/113 (31%), Positives = 63/113 (56%), Gaps = 1/113 (0%) Query 49 QEIPQVFGYDYQTVERSLTAVYPLLTPDYRQEFQKSANAQIIPEAKKREVVVQANVVGVG 108 Q + YDYQT++R LT ++ ++ + + P AK+R++V + +V Sbjct 119 QNAAALLSYDYQTIDRDTPTRGDRLTGQFKDDYARLVTDLVTPAAKQRKLVTKTSVAMAS 178 Query 109 VMDAKRDCASVMVYLNRTV-TDKTRQPLYDGSRLRVDFQRIDGKWLIAYITPI 160 V+ A D V+ +LN+T T QP+ GSR+R+ + I+G+WL++ +TP+ Sbjct 179 VISADTDKVQVLTFLNQTSQAQDTPQPVLTGSRVRITMEHINGRWLVSELTPL 231 >gi|226306849|ref|YP_002766809.1| hypothetical protein RER_33620 [Rhodococcus erythropolis PR4] gi|226185966|dbj|BAH34070.1| conserved hypothetical protein [Rhodococcus erythropolis PR4] Length=155 Score = 71.6 bits (174), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 41/161 (26%), Positives = 85/161 (53%), Gaps = 7/161 (4%) Query 1 MRRLISVAYALMVATIVGLSAAGGWFYWDRVQTGGEASARALLPKLAMQEIPQVFGYDYQ 60 M+R++ +A+A ++ +VG+ GG W ++ +AR + +A + + Y+ Sbjct 1 MKRVV-LAFAALI--LVGV---GGTLLWSHHRSAAAETARVEVIGVAPMLVENLLTYNSD 54 Query 61 TVERSLTAVYPLLTPDYRQEFQKSANAQIIPEAKKREVVVQANVVGVGVMDAKRDCASVM 120 TV+ L + ++ F + + + P++K++ + +A VV VGV+ A D A ++ Sbjct 55 TVDEDLAHAAEGASGTFQDGFAEFGSKTVAPQSKEQGISTKARVVDVGVLSAAADRAELL 114 Query 121 VYLNRTVTDKTR-QPLYDGSRLRVDFQRIDGKWLIAYITPI 160 +++++ T R P SR+ V R+DG WL++ +TP+ Sbjct 115 LFVDQITTSIARPAPASTSSRVEVTLDRVDGTWLVSAMTPV 155 >gi|229492738|ref|ZP_04386539.1| conserved hypothetical protein [Rhodococcus erythropolis SK121] gi|229320397|gb|EEN86217.1| conserved hypothetical protein [Rhodococcus erythropolis SK121] Length=155 Score = 71.6 bits (174), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 44/162 (28%), Positives = 84/162 (52%), Gaps = 9/162 (5%) Query 1 MRRLISVAYALMVATIVGLSAAGGWFYWDRVQTGGEASARALLPKLAMQEIPQVFGYDYQ 60 M+R++ +A A +V L GG W ++G +ARA + +A + ++ Y+ Sbjct 1 MKRMV-IALAALV-----LMGVGGTAIWSHHRSGDAETARAEVIGVAPTLVEKLLSYNSD 54 Query 61 TVERSLTAVYPLLTPDYRQEFQKSANAQIIPEAKKREVVVQANVVGVGVMDAKRDCASVM 120 TV+ L ++ F + + + P++K++ + +A VV VGV+ D A V+ Sbjct 55 TVDDDLARAAEGAGGSFQDSFTEFGSKTVAPQSKEQGISTKARVVDVGVLSVAADRAEVL 114 Query 121 VYLNRTVTDKTRQ--PLYDGSRLRVDFQRIDGKWLIAYITPI 160 V++++ +T T Q P SR+ V R++G WL++ +TP+ Sbjct 115 VFVDQ-ITTSTAQPAPASTSSRVEVTLDRVEGTWLVSAMTPV 155 >gi|333989715|ref|YP_004522329.1| Mce associated membrane protein [Mycobacterium sp. JDM601] gi|333485683|gb|AEF35075.1| Mce associated membrane protein [Mycobacterium sp. JDM601] Length=157 Score = 70.9 bits (172), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 51/160 (32%), Positives = 80/160 (50%), Gaps = 3/160 (1%) Query 1 MRRLISVAYALMVATIVGLSAAGGWFYWDRVQTGGEASARALLPKLAMQEIPQVFGYDYQ 60 MRRL+ Y ++ I+ + A GW W + R + A + V + Sbjct 1 MRRLV---YGVLPGLILVAAIAAGWVKWYDGSLRLDELIRDETIREASEFTAAVLSFQPD 57 Query 61 TVERSLTAVYPLLTPDYRQEFQKSANAQIIPEAKKREVVVQANVVGVGVMDAKRDCASVM 120 TVER L+A PL+T +R+ F A IIP+AK R+VV A V + A A+V+ Sbjct 58 TVERDLSAAEPLMTDGFRESFVARARDLIIPDAKARKVVAVAEVPAAASVFATPRRAAVL 117 Query 121 VYLNRTVTDKTRQPLYDGSRLRVDFQRIDGKWLIAYITPI 160 V+ +RT+T + +P S RV +++ G+WL+A P+ Sbjct 118 VFADRTITVGSDEPAEVESSYRVALEKVGGRWLVADFEPV 157 >gi|254820128|ref|ZP_05225129.1| hypothetical protein MintA_09386 [Mycobacterium intracellulare ATCC 13950] Length=220 Score = 70.5 bits (171), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 44/159 (28%), Positives = 73/159 (46%), Gaps = 8/159 (5%) Query 6 SVAYALMVATIVGLSAAGGWFYWDRVQTGGEASARALLP----KLAMQEIPQVFGYDYQT 61 ++ YAL+ + L+ A G+ W GG A L + A + + Y + Sbjct 66 AIVYALLPGLALSLAVAAGFLKWQ----GGSARTAQLAATESVRTATESTIALLSYRADS 121 Query 62 VERSLTAVYPLLTPDYRQEFQKSANAQIIPEAKKREVVVQANVVGVGVMDAKRDCASVMV 121 VE+ L A LT + + + +IP AK++ + A V ++A A V++ Sbjct 122 VEKDLEAARSRLTGKFLNAYTSLTHDVVIPGAKQKHISASATVPAAAPIEATGSHAVVLL 181 Query 122 YLNRTVTDKTRQPLYDGSRLRVDFQRIDGKWLIAYITPI 160 ++N+TVT P S +RV ++DG+WLIA PI Sbjct 182 FVNQTVTIGQDSPTNSASSVRVTLDKVDGRWLIAEFDPI 220 >gi|226349628|ref|YP_002776742.1| hypothetical membrane protein [Rhodococcus opacus B4] gi|226245543|dbj|BAH55890.1| hypothetical membrane protein [Rhodococcus opacus B4] Length=176 Score = 70.1 bits (170), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 40/115 (35%), Positives = 64/115 (56%), Gaps = 1/115 (0%) Query 47 AMQEIPQVFGYDYQTVERSLTAVYPLLTPDYRQEFQKSANAQIIPEAKKREVVVQANVVG 106 A Q +P + YD+ TV+ T L ++R +F+ + IIP AK+R+VV A VV Sbjct 62 AAQLVPDILSYDFNTVDDHFTGSLEHLGGEFRTQFESVSKDVIIPSAKQRQVVTSATVVE 121 Query 107 VGVMDAKRDCASVMVYLNRTVTD-KTRQPLYDGSRLRVDFQRIDGKWLIAYITPI 160 V+ A D A+V+++LN++ T + P DGSR++V R W I ++P+ Sbjct 122 SSVVSASADAATVLMFLNQSTTSTDSPAPKLDGSRVQVSLHRDGDSWQITEMSPV 176 >gi|108798501|ref|YP_638698.1| hypothetical protein Mmcs_1531 [Mycobacterium sp. MCS] gi|119867601|ref|YP_937553.1| hypothetical protein Mkms_1554 [Mycobacterium sp. KMS] gi|108768920|gb|ABG07642.1| hypothetical protein Mmcs_1531 [Mycobacterium sp. MCS] gi|119693690|gb|ABL90763.1| conserved hypothetical protein [Mycobacterium sp. KMS] Length=205 Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 40/154 (26%), Positives = 72/154 (47%), Gaps = 0/154 (0%) Query 7 VAYALMVATIVGLSAAGGWFYWDRVQTGGEASARALLPKLAMQEIPQVFGYDYQTVERSL 66 VAY ++ ++ ++ G+ W G + A A + + Y VE+ L Sbjct 52 VAYVVLPVAVLAMACGVGFLKWQANSIGTSQATAAQSVSAATEIATAMLSYRADQVEQDL 111 Query 67 TAVYPLLTPDYRQEFQKSANAQIIPEAKKREVVVQANVVGVGVMDAKRDCASVMVYLNRT 126 TA +T ++R E+ N +IP AK++ V +A V ++ + D A V+VY+++T Sbjct 112 TAASDRMTGEFRNEYTTLINDVVIPGAKEKRVSAEATVPAAALVSSSADRAEVLVYIDQT 171 Query 127 VTDKTRQPLYDGSRLRVDFQRIDGKWLIAYITPI 160 T P S RV +++ +WL+A P+ Sbjct 172 TTVGDDPPSATTSSARVSLEKVGDRWLLAGFEPV 205 >gi|229494485|ref|ZP_04388248.1| twin-arginine translocation pathway signal [Rhodococcus erythropolis SK121] gi|229318847|gb|EEN84705.1| twin-arginine translocation pathway signal [Rhodococcus erythropolis SK121] Length=184 Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 45/160 (29%), Positives = 85/160 (54%), Gaps = 4/160 (2%) Query 5 ISVAYALMVATIVGLSAAGGWFYWDRVQTGGEASARALLPKLAMQEIPQ---VFGYDYQT 61 +++ ++ A + L+A + Y+ T A+ ++A Q +F YDY Sbjct 25 LAIILCVISAVAIALAAVSAYLYFGPDGTRDTAAIDQTRDEVAQASSDQAVAMFQYDYNN 84 Query 62 VERSLTAVYPLLTPDYRQEFQKSANAQIIPEAKKREVVVQANVVGVGVMDAKRDCASVMV 121 V++ L A LT D++ F + IIP AK++ + VQ V G V+DA+ D A+ M+ Sbjct 85 VDQQLHAATDGLTGDFQGTFTNLIESVIIPGAKEKSLTVQVVVQGAAVLDAEADSATTML 144 Query 122 YLNR-TVTDKTRQPLYDGSRLRVDFQRIDGKWLIAYITPI 160 +LN+ T + ++ + + GSR+++ ++ DG+WL+ + P Sbjct 145 FLNQITTSSESPEAVASGSRVKMSLEKQDGRWLVNNVQPF 184 >gi|226304456|ref|YP_002764414.1| hypothetical protein RER_09670 [Rhodococcus erythropolis PR4] gi|226183571|dbj|BAH31675.1| conserved hypothetical protein [Rhodococcus erythropolis PR4] Length=177 Score = 68.6 bits (166), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 45/159 (29%), Positives = 85/159 (54%), Gaps = 4/159 (2%) Query 5 ISVAYALMVATIVGLSAAGGWFYWDRVQTGGEASARALLPKLAMQEIPQ---VFGYDYQT 61 +++ ++ A + L+A + Y+ T A+ ++A Q +F YDY Sbjct 18 LAIVLCVISAVAIALAAVSAYLYFGPGGTRDIAAIDQTRDEVAQASSDQAVAMFQYDYNN 77 Query 62 VERSLTAVYPLLTPDYRQEFQKSANAQIIPEAKKREVVVQANVVGVGVMDAKRDCASVMV 121 V++ L A LT D++ F + IIP AK++ + VQ V G V+DA+ D A+ M+ Sbjct 78 VDQQLHAATDGLTGDFQGTFTNLIESVIIPGAKEKSLTVQVVVQGAAVLDAEADSATTML 137 Query 122 YLNR-TVTDKTRQPLYDGSRLRVDFQRIDGKWLIAYITP 159 +LN+ T + ++ + + GSR+++ ++ DG+WL+ + P Sbjct 138 FLNQITTSSESPEAVASGSRVKMSLEKQDGRWLVNNVQP 176 >gi|312138217|ref|YP_004005553.1| mce associated protein mas2b [Rhodococcus equi 103S] gi|311887556|emb|CBH46868.1| putative Mce associated protein Mas2B [Rhodococcus equi 103S] Length=168 Score = 68.6 bits (166), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 40/141 (29%), Positives = 72/141 (52%), Gaps = 4/141 (2%) Query 24 GWFYWD---RVQTGGEASARALLPKLAMQEIPQVFGYDYQTVERSLTAVYPLLTPDYRQE 80 GW YW +T AR+ + + ++ + GY++ T + L A LT Y+ E Sbjct 28 GWLYWGPGGMRETDATERARSEVLDIVDGKVVAMLGYNHNTAQDQLHAAAEGLTDGYKAE 87 Query 81 FQKSANAQIIPEAKKREVVVQANVVGVGVMDAKRDCASVMVYLNR-TVTDKTRQPLYDGS 139 + + + I P AK++ + VQ V++A D ++YLN+ T + ++ + + GS Sbjct 88 YLELVDKTIAPGAKEKAIDVQVTSSAKSVVEASPDRVVTLLYLNQITTSSESPEAVSSGS 147 Query 140 RLRVDFQRIDGKWLIAYITPI 160 R+RV+ + WLI ++TPI Sbjct 148 RVRVEMVKDGDDWLINWLTPI 168 >gi|325674877|ref|ZP_08154564.1| hypothetical protein HMPREF0724_12346 [Rhodococcus equi ATCC 33707] gi|325554463|gb|EGD24138.1| hypothetical protein HMPREF0724_12346 [Rhodococcus equi ATCC 33707] Length=164 Score = 68.6 bits (166), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 40/141 (29%), Positives = 72/141 (52%), Gaps = 4/141 (2%) Query 24 GWFYWD---RVQTGGEASARALLPKLAMQEIPQVFGYDYQTVERSLTAVYPLLTPDYRQE 80 GW YW +T AR+ + + ++ + GY++ T + L A LT Y+ E Sbjct 24 GWLYWGPGGMRETDATERARSEVLDIVDGKVVAMLGYNHNTAQDQLHAAAEGLTDGYKAE 83 Query 81 FQKSANAQIIPEAKKREVVVQANVVGVGVMDAKRDCASVMVYLNR-TVTDKTRQPLYDGS 139 + + + I P AK++ + VQ V++A D ++YLN+ T + ++ + + GS Sbjct 84 YLELVDKTIAPGAKEKAIDVQVTSSAKSVVEASPDRVVTLLYLNQITTSSESPEAVSSGS 143 Query 140 RLRVDFQRIDGKWLIAYITPI 160 R+RV+ + WLI ++TPI Sbjct 144 RVRVEMVKDGDDWLINWLTPI 164 >gi|111021677|ref|YP_704649.1| hypothetical protein RHA1_ro04705 [Rhodococcus jostii RHA1] gi|110821207|gb|ABG96491.1| conserved hypothetical protein [Rhodococcus jostii RHA1] Length=172 Score = 68.2 bits (165), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 40/138 (29%), Positives = 67/138 (49%), Gaps = 1/138 (0%) Query 24 GWFYWDRVQTGGEASARALLPKLAMQEIPQVFGYDYQTVERSLTAVYPLLTPDYRQEFQK 83 G+ ++D Q AR A ++ + YD+ V+ L A LT +R ++ Sbjct 35 GFLWYDHRQDQLAEQARTEAVDAAGKQAVAMLAYDFADVDNQLAAAADGLTGSFRDDYTT 94 Query 84 SANAQIIPEAKKREVVVQANVVGVGVMDAKRDCASVMVYLNRTVTD-KTRQPLYDGSRLR 142 I P AK++++ VQ +V + D A V++YLN+T T GSR+R Sbjct 95 LVQETIAPGAKEKQLTVQVSVQAAAPVSTTPDEAVVLLYLNQTTTSADAPDARTSGSRVR 154 Query 143 VDFQRIDGKWLIAYITPI 160 V Q++D +WL+ +TP+ Sbjct 155 VSLQKVDDRWLVDQLTPV 172 >gi|342857621|ref|ZP_08714277.1| hypothetical protein MCOL_02055 [Mycobacterium colombiense CECT 3035] gi|342134954|gb|EGT88120.1| hypothetical protein MCOL_02055 [Mycobacterium colombiense CECT 3035] Length=223 Score = 68.2 bits (165), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 40/155 (26%), Positives = 74/155 (48%), Gaps = 0/155 (0%) Query 6 SVAYALMVATIVGLSAAGGWFYWDRVQTGGEASARALLPKLAMQEIPQVFGYDYQTVERS 65 ++ + ++ ++ L+ A G+ W++ AR + A + ++ Y+ TV+ Sbjct 69 TLVFGVLPGLVMLLAGAVGYLKWEQTNLSETRIARIESVQTATESTIKILSYNPDTVDHD 128 Query 66 LTAVYPLLTPDYRQEFQKSANAQIIPEAKKREVVVQANVVGVGVMDAKRDCASVMVYLNR 125 L A LT +R + + + +IP AK++++ A V + A A VMV++N+ Sbjct 129 LDAARDRLTGKFRDAYTQLTHDVVIPGAKQKKISAVATVPAATSVSANPSHAVVMVFVNQ 188 Query 126 TVTDKTRQPLYDGSRLRVDFQRIDGKWLIAYITPI 160 T+ P S +RV R D +WLI+ TPI Sbjct 189 TIVVGNDPPSSTASTVRVSMDRHDNRWLISDFTPI 223 >gi|108801051|ref|YP_641248.1| hypothetical protein Mmcs_4087 [Mycobacterium sp. MCS] gi|119870193|ref|YP_940145.1| hypothetical protein Mkms_4163 [Mycobacterium sp. KMS] gi|126436888|ref|YP_001072579.1| hypothetical protein Mjls_4317 [Mycobacterium sp. JLS] gi|108771470|gb|ABG10192.1| hypothetical protein Mmcs_4087 [Mycobacterium sp. MCS] gi|119696282|gb|ABL93355.1| conserved hypothetical protein [Mycobacterium sp. KMS] gi|126236688|gb|ABO00089.1| conserved hypothetical protein [Mycobacterium sp. JLS] Length=206 Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 40/153 (27%), Positives = 72/153 (48%), Gaps = 0/153 (0%) Query 8 AYALMVATIVGLSAAGGWFYWDRVQTGGEASARALLPKLAMQEIPQVFGYDYQTVERSLT 67 AY ++ A + L+ AGG+ +W AR A + Y+ Q+VE+ L Sbjct 54 AYGVVPALALVLAVAGGYLFWRNYTADAAEQAREDSVAAARSIAISMLTYEPQSVEQQLG 113 Query 68 AVYPLLTPDYRQEFQKSANAQIIPEAKKREVVVQANVVGVGVMDAKRDCASVMVYLNRTV 127 A LT +R + + ++P AK+R++ +V + A+ D A V++++N+TV Sbjct 114 AAKEQLTGTFRDTYSSLIDTVVVPGAKERQISAVTDVPAAASVSAEPDHAVVLLFVNQTV 173 Query 128 TDKTRQPLYDGSRLRVDFQRIDGKWLIAYITPI 160 T + P S +RV ++ W ++ PI Sbjct 174 TVGSEPPTNTASSVRVTLDKVGDHWRVSEFQPI 206 >gi|226361927|ref|YP_002779705.1| hypothetical protein ROP_25130 [Rhodococcus opacus B4] gi|226240412|dbj|BAH50760.1| hypothetical membrane protein [Rhodococcus opacus B4] Length=256 Score = 65.5 bits (158), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 41/125 (33%), Positives = 61/125 (49%), Gaps = 1/125 (0%) Query 37 ASARALLPKLAMQEIPQVFGYDYQTVERSLTAVYPLLTPDYRQEFQKSANAQIIPEAKKR 96 + ARA +LA + Y +TV+ L LLT D +++ A + P AK + Sbjct 131 SDARAATVQLASDGAAALLSYTPETVDEDLDRASALLTGDLLNSYRQLAGDVVGPTAKDK 190 Query 97 EVVVQANVVGVGVMDAKRDCASVMVYLNRTVT-DKTRQPLYDGSRLRVDFQRIDGKWLIA 155 V +QA VG V D A V+VY+N+T T T +P + +RV +DG WLI+ Sbjct 191 GVTMQAVPVGAAVESVTTDTARVLVYVNQTTTMADTPEPSQTQNVVRVTLSHVDGNWLIS 250 Query 156 YITPI 160 P+ Sbjct 251 GFDPL 255 >gi|226364214|ref|YP_002781996.1| hypothetical protein ROP_48040 [Rhodococcus opacus B4] gi|226242703|dbj|BAH53051.1| hypothetical protein [Rhodococcus opacus B4] Length=172 Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 34/108 (32%), Positives = 57/108 (53%), Gaps = 1/108 (0%) Query 54 VFGYDYQTVERSLTAVYPLLTPDYRQEFQKSANAQIIPEAKKREVVVQANVVGVGVMDAK 113 + YD+ V+ L A LT +R+++ I P AK++++ VQ +V + Sbjct 65 MLAYDFADVDNQLAAAADGLTGSFREDYTTLVQETIAPGAKEKQLTVQVSVQAAAPVSTT 124 Query 114 RDCASVMVYLNRTVTD-KTRQPLYDGSRLRVDFQRIDGKWLIAYITPI 160 D A V++YLN+T T GSR+RV Q++D +WL+ +TP+ Sbjct 125 PDEAVVLLYLNQTTTSADAPDARTSGSRVRVSLQKVDDRWLVDQLTPV 172 >gi|296171129|ref|ZP_06852581.1| twin-arginine translocation pathway signal [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295894319|gb|EFG74073.1| twin-arginine translocation pathway signal [Mycobacterium parascrofulaceum ATCC BAA-614] Length=167 Score = 65.1 bits (157), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 38/155 (25%), Positives = 69/155 (45%), Gaps = 0/155 (0%) Query 6 SVAYALMVATIVGLSAAGGWFYWDRVQTGGEASARALLPKLAMQEIPQVFGYDYQTVERS 65 ++AY L+ + L++A G+ W G R + A + + Y TVER Sbjct 13 ALAYGLIPGLALSLASAAGFLKWQGSSAGDADRGRIEATQAAREGTAALLTYRPDTVERD 72 Query 66 LTAVYPLLTPDYRQEFQKSANAQIIPEAKKREVVVQANVVGVGVMDAKRDCASVMVYLNR 125 L A LT ++ + + +IP ++++ V A V + A D ++++N+ Sbjct 73 LGAARDRLTGRFKDAYTSLSRDVVIPGSRQKSVSAVATVQSAASVSAGPDHGVFLLFVNQ 132 Query 126 TVTDKTRQPLYDGSRLRVDFQRIDGKWLIAYITPI 160 T P Y S +RV ++ G+WLI+ P+ Sbjct 133 TTIVGAAAPAYTASSVRVTMDKVGGRWLISGFDPV 167 >gi|84494800|ref|ZP_00993919.1| hypothetical protein JNB_08379 [Janibacter sp. HTCC2649] gi|84384293|gb|EAQ00173.1| hypothetical protein JNB_08379 [Janibacter sp. HTCC2649] Length=247 Score = 64.7 bits (156), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 35/108 (33%), Positives = 59/108 (55%), Gaps = 1/108 (0%) Query 51 IPQVFGYDYQTVERSLTAVYPLLTPDYRQEFQKSANAQIIPEAKKREVVVQANVVGVGVM 110 + QV Y+Y T+ + L A LLT ++QEF ++ I+P A+K + VV+A V GVM Sbjct 137 LEQVLSYNYSTMTQQLPASQALLTGTFKQEFGETMTKTIVPLAQKDKTVVKARVYEAGVM 196 Query 111 DAKRDCASVMVYLNRTVT-DKTRQPLYDGSRLRVDFQRIDGKWLIAYI 157 D +V ++N+ T D ++P D +R+ R +WL++ + Sbjct 197 SQTDDTVTVQAFVNQARTSDTQKEPSIDQNRVIATMTRSGNRWLVSSL 244 >gi|315443571|ref|YP_004076450.1| hypothetical protein Mspyr1_19540 [Mycobacterium sp. Spyr1] gi|315261874|gb|ADT98615.1| hypothetical protein Mspyr1_19540 [Mycobacterium sp. Spyr1] Length=209 Score = 63.9 bits (154), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 44/157 (29%), Positives = 73/157 (47%), Gaps = 6/157 (3%) Query 7 VAYALMVATIVGLSAAGGWFYWDRVQTGGEASARALLPKLAMQEIPQV--FGYDYQTVER 64 VA LM+A GL+ GW Y++ + E A L + + Y +++++ Sbjct 56 VAAVLMLAGSAGLA---GWLYYNEYRPDKETDPAAAQVALEAAKTGTIALLSYSPESLDQ 112 Query 65 SLTAVYPLLTPDYRQEFQKSANAQIIPEAKKREVVVQANVVGVGVMDAKRDCASVMVYLN 124 LT D+ + + + P AK++ V A+VV GV D A V+V++N Sbjct 113 DFANAKSKLTGDFLDYYTQFTEQIVTPAAKEKSVKTAASVVRAGVSQIAADSAEVLVFIN 172 Query 125 RTVTDKTR-QPLYDGSRLRVDFQRIDGKWLIAYITPI 160 +T T K + S ++V ++IDG WLIA P+ Sbjct 173 QTTTSKENPDGAFAASSVKVGMKKIDGNWLIASFDPV 209 >gi|120401933|ref|YP_951762.1| hypothetical protein Mvan_0918 [Mycobacterium vanbaalenii PYR-1] gi|119954751|gb|ABM11756.1| conserved hypothetical protein [Mycobacterium vanbaalenii PYR-1] Length=185 Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 32/106 (31%), Positives = 53/106 (50%), Gaps = 0/106 (0%) Query 54 VFGYDYQTVERSLTAVYPLLTPDYRQEFQKSANAQIIPEAKKREVVVQANVVGVGVMDAK 113 + Y+ TV+R L AV LT D+R F + +IP AK++++ V + A Sbjct 77 LLSYEPDTVDRELVAVRDRLTGDFRDAFTALTDDVVIPGAKQKQISSAVTVTAASSVSAT 136 Query 114 RDCASVMVYLNRTVTDKTRQPLYDGSRLRVDFQRIDGKWLIAYITP 159 A V++++N+T + P S +RV ++G+WLIA P Sbjct 137 ESHAEVLLFVNQTTVMGSDPPTQTASSVRVSLDYVEGRWLIADFAP 182 >gi|145223114|ref|YP_001133792.1| hypothetical protein Mflv_2527 [Mycobacterium gilvum PYR-GCK] gi|145215600|gb|ABP45004.1| hypothetical protein Mflv_2527 [Mycobacterium gilvum PYR-GCK] Length=209 Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 44/157 (29%), Positives = 73/157 (47%), Gaps = 6/157 (3%) Query 7 VAYALMVATIVGLSAAGGWFYWDRVQTGGEASARALLPKLAMQEIPQV--FGYDYQTVER 64 VA LM+A GL+ GW Y++ + E A L + + Y +++++ Sbjct 56 VAAVLMLAGSAGLA---GWLYYNEYRPDRETDPAAAQVALEAAKTGTIALLSYSPESLDQ 112 Query 65 SLTAVYPLLTPDYRQEFQKSANAQIIPEAKKREVVVQANVVGVGVMDAKRDCASVMVYLN 124 LT D+ + + + P AK++ V A+VV GV D A V+V++N Sbjct 113 DFANAKSKLTGDFLDYYTQFTEQIVTPAAKEKSVKTAASVVRAGVSQIAADSAEVLVFIN 172 Query 125 RTVTDKTR-QPLYDGSRLRVDFQRIDGKWLIAYITPI 160 +T T K + S ++V ++IDG WLIA P+ Sbjct 173 QTTTSKENPDGAFAASSVKVGMKKIDGNWLIASFDPV 209 >gi|226364094|ref|YP_002781876.1| hypothetical protein ROP_46840 [Rhodococcus opacus B4] gi|226242583|dbj|BAH52931.1| hypothetical membrane protein [Rhodococcus opacus B4] Length=176 Score = 61.6 bits (148), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 36/115 (32%), Positives = 59/115 (52%), Gaps = 1/115 (0%) Query 47 AMQEIPQVFGYDYQTVERSLTAVYPLLTPDYRQEFQKSANAQIIPEAKKREVVVQANVVG 106 A + V YD+ T++ + P L D R +F IIP AK+R+VV A VV Sbjct 62 ATHLVADVLSYDFNTIDAHFADILPSLGGDLRGQFDSVGKEVIIPSAKQRQVVTSATVVE 121 Query 107 VGVMDAKRDCASVMVYLNRTVTD-KTRQPLYDGSRLRVDFQRIDGKWLIAYITPI 160 V+ A +++ ++N++ T + P DGSR+RV +G W++ +TP+ Sbjct 122 SSVVSASEHAVTLLFFVNQSTTSTDSAAPKLDGSRVRVGMTEQEGAWVMTEMTPV 176 >gi|118473894|ref|YP_889453.1| hypothetical protein MSMEG_5207 [Mycobacterium smegmatis str. MC2 155] gi|118175181|gb|ABK76077.1| conserved hypothetical protein [Mycobacterium smegmatis str. MC2 155] Length=231 Score = 60.5 bits (145), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 37/152 (25%), Positives = 69/152 (46%), Gaps = 0/152 (0%) Query 9 YALMVATIVGLSAAGGWFYWDRVQTGGEASARALLPKLAMQEIPQVFGYDYQTVERSLTA 68 +A++ A + L+A + W +AR + A ++ Y+ TVE L Sbjct 78 FAVIPAVALLLAAGSAFLKWQIAWNAESDTARTESVQAAKDITVEMLSYEPDTVEAHLNE 137 Query 69 VYPLLTPDYRQEFQKSANAQIIPEAKKREVVVQANVVGVGVMDAKRDCASVMVYLNRTVT 128 LT ++R + N +++P A + V A+V +GV A D +++++N+ V Sbjct 138 ALNRLTGNFRDSYTTLVNTRVVPVATTQRVTANADVPAIGVESASPDRVELVLFVNQLVA 197 Query 129 DKTRQPLYDGSRLRVDFQRIDGKWLIAYITPI 160 + P S +R R DG+WL++ P+ Sbjct 198 VGDQAPQKTTSTVRATMVREDGQWLMSEFEPV 229 >gi|226361929|ref|YP_002779707.1| hypothetical protein ROP_25150 [Rhodococcus opacus B4] gi|226240414|dbj|BAH50762.1| hypothetical membrane protein [Rhodococcus opacus B4] Length=185 Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 35/108 (33%), Positives = 55/108 (51%), Gaps = 1/108 (0%) Query 54 VFGYDYQTVERSLTAVYPLLTPDYRQEFQKSANAQIIPEAKKREVVVQANVVGVGVMDAK 113 + Y TVE + A LT D+ EF + ++P AK+ + Q V G ++ A+ Sbjct 78 ILSYSPDTVETDVEAAKSHLTGDFLTEFSDLGASDVVPRAKQDTIGAQWVVTGTSLVTAE 137 Query 114 RDCASVMVYLNRTVTD-KTRQPLYDGSRLRVDFQRIDGKWLIAYITPI 160 D A+V+V+L+ TVT T QP S +RV +R W I+ + P+ Sbjct 138 ADTATVLVFLHGTVTSGATPQPEELSSSVRVRAERTGQSWSISDLEPL 185 >gi|315443160|ref|YP_004076039.1| hypothetical protein Mspyr1_15340 [Mycobacterium sp. Spyr1] gi|315261463|gb|ADT98204.1| hypothetical protein Mspyr1_15340 [Mycobacterium sp. Spyr1] Length=225 Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 44/163 (27%), Positives = 74/163 (46%), Gaps = 9/163 (5%) Query 7 VAYALMVATIVGLSAAGGWFYW-DRVQTGGEAS-ARALLPKLAMQEIPQ-------VFGY 57 VA+ ++ + L+A G+ W D G S A P LA + + Y Sbjct 63 VAFIVLPVIALVLAAGAGYLKWLDNSNRDGSMSVGGAGRPSLAETSVQAARDGTIALLSY 122 Query 58 DYQTVERSLTAVYPLLTPDYRQEFQKSANAQIIPEAKKREVVVQANVVGVGVMDAKRDCA 117 TVE+ L A LLT ++R + N +IP AK++++ A V + + A Sbjct 123 APDTVEQQLGAARELLTGEFRDSYTSLTNDVVIPGAKEKQISAIATVPAAASVSVTGEEA 182 Query 118 SVMVYLNRTVTDKTRQPLYDGSRLRVDFQRIDGKWLIAYITPI 160 V++++N+TVT P S +RV ++ +WLI+ P+ Sbjct 183 VVLLFVNQTVTMGPDAPTDTASSVRVTLEKDGDRWLISKFDPV 225 >gi|240171813|ref|ZP_04750472.1| hypothetical protein MkanA1_21035 [Mycobacterium kansasii ATCC 12478] Length=184 Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 38/154 (25%), Positives = 75/154 (49%), Gaps = 1/154 (0%) Query 7 VAYALMVATIVGLSAAGGWFYWDRVQTGGEASARALLPKLAMQEIPQVFGYDYQTVERSL 66 +AY ++ + L+ G+ W + + +++ R + + A ++ Y T ER L Sbjct 32 LAYGVLPGLALALALLAGFLKW-QCSSAPDSTGRIEVIQAARAATVELLSYRPDTAERDL 90 Query 67 TAVYPLLTPDYRQEFQKSANAQIIPEAKKREVVVQANVVGVGVMDAKRDCASVMVYLNRT 126 A LT ++ E+ +IP AK++++ A V + A+ + V++++N+T Sbjct 91 GAARDRLTGRFKDEYTSLTRDVVIPGAKRKQISAVATVPAAAAVSAQPNHGVVLLFVNQT 150 Query 127 VTDKTRQPLYDGSRLRVDFQRIDGKWLIAYITPI 160 T P Y S +RV ++DG+WLI+ P+ Sbjct 151 TIVGTEAPTYTASSVRVTLDKVDGRWLISGFDPV 184 >gi|108800619|ref|YP_640816.1| twin-arginine translocation pathway signal [Mycobacterium sp. MCS] gi|119869758|ref|YP_939710.1| twin-arginine translocation pathway signal [Mycobacterium sp. KMS] gi|108771038|gb|ABG09760.1| Twin-arginine translocation pathway signal [Mycobacterium sp. MCS] gi|119695847|gb|ABL92920.1| twin-arginine translocation pathway signal [Mycobacterium sp. KMS] Length=209 Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 42/165 (26%), Positives = 76/165 (47%), Gaps = 8/165 (4%) Query 2 RRLI-SVAYALMVATIVGLSAAGGWFYWDRV----QTGGEASARALLPKLAMQEIPQVFG 56 RRL+ +V A++ ++ A W Y+ + +T EA+ A+ A Q + Sbjct 47 RRLVGAVGMAVLAIALIASVGATAWLYFFQFRPDQETDSEAAKVAI--DAASQASVSLLT 104 Query 57 YDYQTVERSLTAVYPLLTPDYRQEFQKSANAQIIPEAKKREVVVQANVVGVGVMDAKRDC 116 Y +T+++ A LT D+ + + P AK+++V A VV + + Sbjct 105 YSPETLDKDFAAAKTQLTGDFLDYYTDFTEKIVTPAAKQKQVKTSAAVVQAALSQLSPES 164 Query 117 ASVMVYLNRTVTDKTR-QPLYDGSRLRVDFQRIDGKWLIAYITPI 160 A V++++N+T T K Y S ++V +IDG W I+ P+ Sbjct 165 AEVLLFINQTTTSKENPDGAYAASSVKVGMTKIDGAWKISSFDPV 209 Lambda K H 0.323 0.136 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 127750398496 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40