BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv3493c
Length=242
Score E
Sequences producing significant alignments: (Bits) Value
gi|15610629|ref|NP_218010.1| Mce associated alanine and valine r... 483 9e-135
gi|167966664|ref|ZP_02548941.1| MCE associated alanine and valin... 404 8e-111
gi|289747323|ref|ZP_06506701.1| MCE associated alanine and valin... 345 2e-93
gi|298526973|ref|ZP_07014382.1| conserved hypothetical protein [... 317 9e-85
gi|342862232|ref|ZP_08718874.1| hypothetical protein MCOL_25201 ... 307 9e-82
gi|118619246|ref|YP_907578.1| hypothetical protein MUL_4056 [Myc... 295 3e-78
gi|41406668|ref|NP_959504.1| hypothetical protein MAP0570 [Mycob... 290 1e-76
gi|240170048|ref|ZP_04748707.1| hypothetical MCE associated alan... 290 1e-76
gi|118463180|ref|YP_879942.1| hypothetical protein MAV_0663 [Myc... 286 1e-75
gi|254773619|ref|ZP_05215135.1| hypothetical protein MaviaA2_029... 285 4e-75
gi|296166527|ref|ZP_06848958.1| MCE-associated alanine and valin... 276 1e-72
gi|254821779|ref|ZP_05226780.1| hypothetical protein MintA_17737... 271 4e-71
gi|126437558|ref|YP_001073249.1| hypothetical protein Mjls_4994 ... 253 2e-65
gi|108801574|ref|YP_641771.1| hypothetical protein Mmcs_4611 [My... 240 1e-61
gi|118469329|ref|YP_890120.1| hypothetical protein MSMEG_5894 [M... 228 8e-58
gi|315442593|ref|YP_004075472.1| hypothetical protein Mspyr1_094... 221 8e-56
gi|120406144|ref|YP_955973.1| hypothetical protein Mvan_5196 [My... 217 1e-54
gi|333992264|ref|YP_004524878.1| hypothetical protein JDM601_362... 191 8e-47
gi|145222154|ref|YP_001132832.1| hypothetical protein Mflv_1562 ... 188 6e-46
gi|169631225|ref|YP_001704874.1| MCE-family protein [Mycobacteri... 171 9e-41
gi|111021676|ref|YP_704648.1| hypothetical protein RHA1_ro04704 ... 78.6 8e-13
gi|312138216|ref|YP_004005552.1| mce associated protein mas2a [R... 72.4 6e-11
gi|226364213|ref|YP_002781995.1| hypothetical protein ROP_48030 ... 68.6 8e-10
gi|333918563|ref|YP_004492144.1| hypothetical protein AS9A_0892 ... 63.2 4e-08
gi|325674878|ref|ZP_08154565.1| hypothetical protein HMPREF0724_... 60.5 2e-07
gi|226361011|ref|YP_002778789.1| hypothetical protein ROP_15970 ... 55.5 7e-06
gi|333992103|ref|YP_004524717.1| hypothetical protein JDM601_346... 53.1 4e-05
gi|145223113|ref|YP_001133791.1| hypothetical protein Mflv_2526 ... 52.8 5e-05
gi|315443570|ref|YP_004076449.1| hypothetical protein Mspyr1_195... 52.4 6e-05
gi|54022510|ref|YP_116752.1| hypothetical protein nfa5430 [Nocar... 51.2 1e-04
gi|41406866|ref|NP_959702.1| hypothetical protein MAP0768c [Myco... 49.7 3e-04
gi|183984145|ref|YP_001852436.1| anchored-membrane serine/threon... 49.7 4e-04
gi|118619584|ref|YP_907916.1| anchored-membrane serine/threonine... 49.3 5e-04
gi|118464562|ref|YP_880216.1| hypothetical protein MAV_0956 [Myc... 49.3 5e-04
gi|226349629|ref|YP_002776743.1| hypothetical membrane protein [... 48.9 6e-04
gi|336461213|gb|EGO40089.1| hypothetical protein MAPs_32980 [Myc... 48.9 7e-04
gi|254773845|ref|ZP_05215361.1| hypothetical protein MaviaA2_040... 48.9 7e-04
gi|118619078|ref|YP_907410.1| hypothetical protein MUL_3858 [Myc... 48.9 7e-04
gi|41408208|ref|NP_961044.1| hypothetical protein MAP2110c [Myco... 48.5 8e-04
gi|319950499|ref|ZP_08024412.1| hypothetical protein ES5_12997 [... 48.1 0.001
gi|254774792|ref|ZP_05216308.1| hypothetical protein MaviaA2_089... 47.8 0.001
gi|183983966|ref|YP_001852257.1| hypothetical protein MMAR_3994 ... 47.8 0.001
gi|183984655|ref|YP_001852946.1| hypothetical protein MMAR_4687 ... 47.8 0.002
gi|118462830|ref|YP_881286.1| hypothetical protein MAV_2070 [Myc... 47.4 0.002
gi|118616177|ref|YP_904509.1| hypothetical protein MUL_0306 [Myc... 47.4 0.002
gi|296169587|ref|ZP_06851207.1| conserved hypothetical protein [... 47.0 0.002
gi|118472928|ref|YP_884765.1| hypothetical protein MSMEG_0352 [M... 45.8 0.006
gi|296169604|ref|ZP_06851224.1| conserved hypothetical protein [... 45.4 0.007
gi|119867600|ref|YP_937552.1| hypothetical protein Mkms_1553 [My... 45.4 0.007
gi|108798500|ref|YP_638697.1| hypothetical protein Mmcs_1530 [My... 45.4 0.008
>gi|15610629|ref|NP_218010.1| Mce associated alanine and valine rich protein [Mycobacterium
tuberculosis H37Rv]
gi|15843105|ref|NP_338142.1| hypothetical protein MT3597 [Mycobacterium tuberculosis CDC1551]
gi|31794669|ref|NP_857162.1| Mce associated alanine and valine rich protein [Mycobacterium
bovis AF2122/97]
49 more sequence titles
Length=242
Score = 483 bits (1243), Expect = 9e-135, Method: Compositional matrix adjust.
Identities = 241/242 (99%), Positives = 242/242 (100%), Gaps = 0/242 (0%)
Query 1 VAADTGVAGGQQSTTRRARRKASRPAGPAEGESSRPAQGAATVRAAARTESKPAKAAKPA 60
+AADTGVAGGQQSTTRRARRKASRPAGPAEGESSRPAQGAATVRAAARTESKPAKAAKPA
Sbjct 1 MAADTGVAGGQQSTTRRARRKASRPAGPAEGESSRPAQGAATVRAAARTESKPAKAAKPA 60
Query 61 LRPVKPPPRRPAHRVLVGWLSLAAGLLAIAALAWGVTALVMQNRDADARQARNQRFVDAA 120
LRPVKPPPRRPAHRVLVGWLSLAAGLLAIAALAWGVTALVMQNRDADARQARNQRFVDAA
Sbjct 61 LRPVKPPPRRPAHRVLVGWLSLAAGLLAIAALAWGVTALVMQNRDADARQARNQRFVDAA 120
Query 121 TQTVVNMFSYTPDTIDESVNRFVNGTSGPLRGMLNANNNVDNLKGLFRATNATSEAVVNG 180
TQTVVNMFSYTPDTIDESVNRFVNGTSGPLRGMLNANNNVDNLKGLFRATNATSEAVVNG
Sbjct 121 TQTVVNMFSYTPDTIDESVNRFVNGTSGPLRGMLNANNNVDNLKGLFRATNATSEAVVNG 180
Query 181 AALEGIDEISDNASVLVSVRVTVADIDGVNKPSMPYRLRVIVHEDENGRMTGYDLKYPDG 240
AALEGIDEISDNASVLVSVRVTVADIDGVNKPSMPYRLRVIVHEDENGRMTGYDLKYPDG
Sbjct 181 AALEGIDEISDNASVLVSVRVTVADIDGVNKPSMPYRLRVIVHEDENGRMTGYDLKYPDG 240
Query 241 GN 242
GN
Sbjct 241 GN 242
>gi|167966664|ref|ZP_02548941.1| MCE associated alanine and valine rich protein [Mycobacterium
tuberculosis H37Ra]
gi|294995737|ref|ZP_06801428.1| hypothetical protein Mtub2_14833 [Mycobacterium tuberculosis
210]
gi|297636149|ref|ZP_06953929.1| hypothetical protein MtubK4_18585 [Mycobacterium tuberculosis
KZN 4207]
20 more sequence titles
Length=200
Score = 404 bits (1037), Expect = 8e-111, Method: Compositional matrix adjust.
Identities = 199/200 (99%), Positives = 200/200 (100%), Gaps = 0/200 (0%)
Query 43 VRAAARTESKPAKAAKPALRPVKPPPRRPAHRVLVGWLSLAAGLLAIAALAWGVTALVMQ 102
+RAAARTESKPAKAAKPALRPVKPPPRRPAHRVLVGWLSLAAGLLAIAALAWGVTALVMQ
Sbjct 1 MRAAARTESKPAKAAKPALRPVKPPPRRPAHRVLVGWLSLAAGLLAIAALAWGVTALVMQ 60
Query 103 NRDADARQARNQRFVDAATQTVVNMFSYTPDTIDESVNRFVNGTSGPLRGMLNANNNVDN 162
NRDADARQARNQRFVDAATQTVVNMFSYTPDTIDESVNRFVNGTSGPLRGMLNANNNVDN
Sbjct 61 NRDADARQARNQRFVDAATQTVVNMFSYTPDTIDESVNRFVNGTSGPLRGMLNANNNVDN 120
Query 163 LKGLFRATNATSEAVVNGAALEGIDEISDNASVLVSVRVTVADIDGVNKPSMPYRLRVIV 222
LKGLFRATNATSEAVVNGAALEGIDEISDNASVLVSVRVTVADIDGVNKPSMPYRLRVIV
Sbjct 121 LKGLFRATNATSEAVVNGAALEGIDEISDNASVLVSVRVTVADIDGVNKPSMPYRLRVIV 180
Query 223 HEDENGRMTGYDLKYPDGGN 242
HEDENGRMTGYDLKYPDGGN
Sbjct 181 HEDENGRMTGYDLKYPDGGN 200
>gi|289747323|ref|ZP_06506701.1| MCE associated alanine and valine rich protein [Mycobacterium
tuberculosis 02_1987]
gi|289687851|gb|EFD55339.1| MCE associated alanine and valine rich protein [Mycobacterium
tuberculosis 02_1987]
Length=218
Score = 345 bits (886), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 180/220 (82%), Positives = 184/220 (84%), Gaps = 2/220 (0%)
Query 23 SRPAGPAEGESSRPAQGAATVRAAARTESKPAKAAKPALRPVKPPPRRPAHRVLVGWLSL 82
+R +G E SRP G R A R E+ AKAAKPALRPVKPP RPAH
Sbjct 1 ARGSGGRRVEPSRPGCGDGEGRGADRIEA--AKAAKPALRPVKPPATRPAHASWSAGFRW 58
Query 83 AAGLLAIAALAWGVTALVMQNRDADARQARNQRFVDAATQTVVNMFSYTPDTIDESVNRF 142
+ LAWGVTALVMQNRDADARQARNQRFVDAATQTVVNMFSYTPDTIDESVNRF
Sbjct 59 RQAYWRLPRLAWGVTALVMQNRDADARQARNQRFVDAATQTVVNMFSYTPDTIDESVNRF 118
Query 143 VNGTSGPLRGMLNANNNVDNLKGLFRATNATSEAVVNGAALEGIDEISDNASVLVSVRVT 202
VNGTSGPLRGMLNANNNVDNLKGLFRATNATSEAVVNGAALEGIDEISDNASVLVSVRVT
Sbjct 119 VNGTSGPLRGMLNANNNVDNLKGLFRATNATSEAVVNGAALEGIDEISDNASVLVSVRVT 178
Query 203 VADIDGVNKPSMPYRLRVIVHEDENGRMTGYDLKYPDGGN 242
VADIDGVNKPSMPYRLRVIVHEDENGRMTGYDLKYPDGGN
Sbjct 179 VADIDGVNKPSMPYRLRVIVHEDENGRMTGYDLKYPDGGN 218
>gi|298526973|ref|ZP_07014382.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A]
gi|298496767|gb|EFI32061.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A]
Length=156
Score = 317 bits (812), Expect = 9e-85, Method: Compositional matrix adjust.
Identities = 155/156 (99%), Positives = 156/156 (100%), Gaps = 0/156 (0%)
Query 87 LAIAALAWGVTALVMQNRDADARQARNQRFVDAATQTVVNMFSYTPDTIDESVNRFVNGT 146
+AIAALAWGVTALVMQNRDADARQARNQRFVDAATQTVVNMFSYTPDTIDESVNRFVNGT
Sbjct 1 MAIAALAWGVTALVMQNRDADARQARNQRFVDAATQTVVNMFSYTPDTIDESVNRFVNGT 60
Query 147 SGPLRGMLNANNNVDNLKGLFRATNATSEAVVNGAALEGIDEISDNASVLVSVRVTVADI 206
SGPLRGMLNANNNVDNLKGLFRATNATSEAVVNGAALEGIDEISDNASVLVSVRVTVADI
Sbjct 61 SGPLRGMLNANNNVDNLKGLFRATNATSEAVVNGAALEGIDEISDNASVLVSVRVTVADI 120
Query 207 DGVNKPSMPYRLRVIVHEDENGRMTGYDLKYPDGGN 242
DGVNKPSMPYRLRVIVHEDENGRMTGYDLKYPDGGN
Sbjct 121 DGVNKPSMPYRLRVIVHEDENGRMTGYDLKYPDGGN 156
>gi|342862232|ref|ZP_08718874.1| hypothetical protein MCOL_25201 [Mycobacterium colombiense CECT
3035]
gi|342130310|gb|EGT83630.1| hypothetical protein MCOL_25201 [Mycobacterium colombiense CECT
3035]
Length=235
Score = 307 bits (786), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 157/217 (73%), Positives = 177/217 (82%), Gaps = 6/217 (2%)
Query 27 GPAEGESSRPAQGAATVRAAARTESK-PAKAAKPALRPVKPPPRRPAHRVLVGWLSLAAG 85
GPA+ E PAQ TVR A SK P+K K L+ +KPPPRR HR LV W+S AA
Sbjct 24 GPAKRE---PAQDV-TVRTEAPAGSKQPSKPVK-TLKSIKPPPRRQPHRTLVAWISFAAA 78
Query 86 LLAIAALAWGVTALVMQNRDADARQARNQRFVDAATQTVVNMFSYTPDTIDESVNRFVNG 145
L+A+ ALA GV AL++Q R A A QAR+QRFVD ATQTVVNMFSY D IDESVNRF+NG
Sbjct 79 LMAVGALAGGVVALLVQQRHATAAQARDQRFVDTATQTVVNMFSYKQDNIDESVNRFING 138
Query 146 TSGPLRGMLNANNNVDNLKGLFRATNATSEAVVNGAALEGIDEISDNASVLVSVRVTVAD 205
TSGPLRGML ANNN +NLK LFR+TNATSEAV+NGAALEG+D ++DNASVLVSVRVTVAD
Sbjct 139 TSGPLRGMLGANNNAENLKALFRSTNATSEAVINGAALEGVDAVTDNASVLVSVRVTVAD 198
Query 206 IDGVNKPSMPYRLRVIVHEDENGRMTGYDLKYPDGGN 242
IDGVNKPSMPYRLRVIVHED+ G+M+GYDLKYPDGGN
Sbjct 199 IDGVNKPSMPYRLRVIVHEDDAGKMSGYDLKYPDGGN 235
>gi|118619246|ref|YP_907578.1| hypothetical protein MUL_4056 [Mycobacterium ulcerans Agy99]
gi|183984949|ref|YP_001853240.1| hypothetical protein MMAR_4981 [Mycobacterium marinum M]
gi|118571356|gb|ABL06107.1| conserved hypothetical alanine and valine rich MCE-associated
protein [Mycobacterium ulcerans Agy99]
gi|183178275|gb|ACC43385.1| conserved hypothetical alanine and valine rich MCE-associated
protein [Mycobacterium marinum M]
Length=243
Score = 295 bits (756), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 177/236 (75%), Positives = 198/236 (84%), Gaps = 4/236 (1%)
Query 11 QQSTTRRARRKASRPAGPAEGESSRPAQGAATV--RAAARTESKPAKAAKPA--LRPVKP 66
+Q+ T+R RR+ASR AGPA+ ES G TV AA T +PAK AKPA L V+P
Sbjct 8 KQTPTQRVRRRASRAAGPAKSESGESDAGETTVGVTAAPSTAKRPAKPAKPARSLTAVRP 67
Query 67 PPRRPAHRVLVGWLSLAAGLLAIAALAWGVTALVMQNRDADARQARNQRFVDAATQTVVN 126
PPRRPAHR LVGWLS AAGL+ AAL GV L++ +RDA+A QAR QRFVD ATQTVVN
Sbjct 68 PPRRPAHRKLVGWLSAAAGLVLAAALGTGVAVLMVGHRDAEAVQARQQRFVDTATQTVVN 127
Query 127 MFSYTPDTIDESVNRFVNGTSGPLRGMLNANNNVDNLKGLFRATNATSEAVVNGAALEGI 186
MFSYTPDTID++VNRFV+GTSGPLRGML+ANNNV+NLKGLFRATNATSEAV+NGAALE I
Sbjct 128 MFSYTPDTIDQAVNRFVDGTSGPLRGMLSANNNVENLKGLFRATNATSEAVINGAALEDI 187
Query 187 DEISDNASVLVSVRVTVADIDGVNKPSMPYRLRVIVHEDENGRMTGYDLKYPDGGN 242
D ++DNASVLVSVRVTVADIDGVNKPSMPYRLRVIVHED+ GRMTGYDLKYPDGGN
Sbjct 188 DSVTDNASVLVSVRVTVADIDGVNKPSMPYRLRVIVHEDDTGRMTGYDLKYPDGGN 243
>gi|41406668|ref|NP_959504.1| hypothetical protein MAP0570 [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|41395017|gb|AAS02887.1| hypothetical protein MAP_0570 [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|336458375|gb|EGO37351.1| hypothetical protein MAPs_13540 [Mycobacterium avium subsp. paratuberculosis
S397]
Length=243
Score = 290 bits (742), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 152/202 (76%), Positives = 170/202 (85%), Gaps = 0/202 (0%)
Query 41 ATVRAAARTESKPAKAAKPALRPVKPPPRRPAHRVLVGWLSLAAGLLAIAALAWGVTALV 100
AT AA KP+ + L+ +KPPPRR HR LV W+S AA +LA+ ALA GV L
Sbjct 42 ATEVAAPTPAPKPSAKSGKTLKSLKPPPRRQPHRTLVAWISFAAAVLAVGALAGGVAVLF 101
Query 101 MQNRDADARQARNQRFVDAATQTVVNMFSYTPDTIDESVNRFVNGTSGPLRGMLNANNNV 160
+Q RDA A+Q+R+QRFVD ATQTVVNMFSY D IDESVNRFVNGTSGPLRGML+ANNNV
Sbjct 102 VQQRDAQAKQSRDQRFVDTATQTVVNMFSYKQDNIDESVNRFVNGTSGPLRGMLSANNNV 161
Query 161 DNLKGLFRATNATSEAVVNGAALEGIDEISDNASVLVSVRVTVADIDGVNKPSMPYRLRV 220
+NLKGLFR+TNATSEAVVNGAALEG+D ++DNASVLVSVRVTVADIDGVNKPSMPYRLRV
Sbjct 162 ENLKGLFRSTNATSEAVVNGAALEGVDAVTDNASVLVSVRVTVADIDGVNKPSMPYRLRV 221
Query 221 IVHEDENGRMTGYDLKYPDGGN 242
IVHED+ GRMTGYDLKYPDGGN
Sbjct 222 IVHEDDAGRMTGYDLKYPDGGN 243
>gi|240170048|ref|ZP_04748707.1| hypothetical MCE associated alanine and valine rich protein [Mycobacterium
kansasii ATCC 12478]
Length=238
Score = 290 bits (742), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 156/217 (72%), Positives = 171/217 (79%), Gaps = 13/217 (5%)
Query 38 QGAATVRAAARTESKPAKAAKPALRPVKPPPRRPAHRV------------LVGWLSLAAG 85
+ A++ R AA T + A+P RP KP A LV W+SLAA
Sbjct 23 KAASSQREAAETPVEVTSMAEPK-RPAKPVTAVKARSAVRPPPRRRARGRLVAWISLAAA 81
Query 86 LLAIAALAWGVTALVMQNRDADARQARNQRFVDAATQTVVNMFSYTPDTIDESVNRFVNG 145
++ IAAL WGV ALV Q+RDADA QAR +RFVD ATQ VVNMFSYTP+TIDE+VNRFVN
Sbjct 82 VVVIAALGWGVLALVGQHRDADAEQARERRFVDTATQLVVNMFSYTPNTIDEAVNRFVNS 141
Query 146 TSGPLRGMLNANNNVDNLKGLFRATNATSEAVVNGAALEGIDEISDNASVLVSVRVTVAD 205
TSGPLRGML+ANNNVDNLKGLFRATNATSEAV+NGAALEGID +SDNASVLVSVRVTVAD
Sbjct 142 TSGPLRGMLSANNNVDNLKGLFRATNATSEAVINGAALEGIDTVSDNASVLVSVRVTVAD 201
Query 206 IDGVNKPSMPYRLRVIVHEDENGRMTGYDLKYPDGGN 242
IDGVNKPSMPYRLRVIVHEDE GRMTGYDLKYPDGGN
Sbjct 202 IDGVNKPSMPYRLRVIVHEDETGRMTGYDLKYPDGGN 238
>gi|118463180|ref|YP_879942.1| hypothetical protein MAV_0663 [Mycobacterium avium 104]
gi|118164467|gb|ABK65364.1| conserved hypothetical protein [Mycobacterium avium 104]
Length=243
Score = 286 bits (733), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 146/182 (81%), Positives = 162/182 (90%), Gaps = 0/182 (0%)
Query 61 LRPVKPPPRRPAHRVLVGWLSLAAGLLAIAALAWGVTALVMQNRDADARQARNQRFVDAA 120
L+ +KPPPRR HR LV W+S AA +LA+ ALA GV L +Q RDA A+Q+R+QRFVD A
Sbjct 62 LKSLKPPPRRQPHRTLVAWISFAAAVLAVGALAGGVAVLFVQQRDAQAKQSRDQRFVDTA 121
Query 121 TQTVVNMFSYTPDTIDESVNRFVNGTSGPLRGMLNANNNVDNLKGLFRATNATSEAVVNG 180
TQTVVNMFSY D IDESVNRFVNGTSGPLRGML+ANNNV+NLKGLFR+TNATSEAVVNG
Sbjct 122 TQTVVNMFSYKQDNIDESVNRFVNGTSGPLRGMLSANNNVENLKGLFRSTNATSEAVVNG 181
Query 181 AALEGIDEISDNASVLVSVRVTVADIDGVNKPSMPYRLRVIVHEDENGRMTGYDLKYPDG 240
AALEG+D ++DNASVLVSVRVTVADIDGVNKPSMPYRLRVIVHED+ GRMTGYDLKYPDG
Sbjct 182 AALEGVDAVTDNASVLVSVRVTVADIDGVNKPSMPYRLRVIVHEDDAGRMTGYDLKYPDG 241
Query 241 GN 242
GN
Sbjct 242 GN 243
>gi|254773619|ref|ZP_05215135.1| hypothetical protein MaviaA2_02940 [Mycobacterium avium subsp.
avium ATCC 25291]
Length=205
Score = 285 bits (729), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 146/182 (81%), Positives = 162/182 (90%), Gaps = 0/182 (0%)
Query 61 LRPVKPPPRRPAHRVLVGWLSLAAGLLAIAALAWGVTALVMQNRDADARQARNQRFVDAA 120
L+ +KPPPRR HR LV W+S AA +LA+ ALA GV L +Q RDA A+Q+R+QRFVD A
Sbjct 24 LKSLKPPPRRQPHRTLVAWISFAAAVLAVGALAGGVAVLFVQQRDAQAKQSRDQRFVDTA 83
Query 121 TQTVVNMFSYTPDTIDESVNRFVNGTSGPLRGMLNANNNVDNLKGLFRATNATSEAVVNG 180
TQTVVNMFSY D IDESVNRFVNGTSGPLRGML+ANNNV+NLKGLFR+TNATSEAVVNG
Sbjct 84 TQTVVNMFSYKQDNIDESVNRFVNGTSGPLRGMLSANNNVENLKGLFRSTNATSEAVVNG 143
Query 181 AALEGIDEISDNASVLVSVRVTVADIDGVNKPSMPYRLRVIVHEDENGRMTGYDLKYPDG 240
AALEG+D ++DNASVLVSVRVTVADIDGVNKPSMPYRLRVIVHED+ GRMTGYDLKYPDG
Sbjct 144 AALEGVDAVTDNASVLVSVRVTVADIDGVNKPSMPYRLRVIVHEDDAGRMTGYDLKYPDG 203
Query 241 GN 242
GN
Sbjct 204 GN 205
>gi|296166527|ref|ZP_06848958.1| MCE-associated alanine and valine rich protein [Mycobacterium
parascrofulaceum ATCC BAA-614]
gi|295898139|gb|EFG77714.1| MCE-associated alanine and valine rich protein [Mycobacterium
parascrofulaceum ATCC BAA-614]
Length=198
Score = 276 bits (707), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 141/182 (78%), Positives = 159/182 (88%), Gaps = 0/182 (0%)
Query 61 LRPVKPPPRRPAHRVLVGWLSLAAGLLAIAALAWGVTALVMQNRDADARQARNQRFVDAA 120
L+ VKPPPRR +R LV W+S AA LLAI ALA + LV+Q R A+A+QAR+QRFVD A
Sbjct 17 LKSVKPPPRRQPNRALVAWISFAAALLAIGALAGCLAVLVVQQRHANAQQARDQRFVDTA 76
Query 121 TQTVVNMFSYTPDTIDESVNRFVNGTSGPLRGMLNANNNVDNLKGLFRATNATSEAVVNG 180
TQTVVNMFSY D IDESVNRF NGTSGPL ML ANNN++NLKG+FR+T+ATSEAVVNG
Sbjct 77 TQTVVNMFSYKQDNIDESVNRFFNGTSGPLHAMLGANNNIENLKGIFRSTDATSEAVVNG 136
Query 181 AALEGIDEISDNASVLVSVRVTVADIDGVNKPSMPYRLRVIVHEDENGRMTGYDLKYPDG 240
AALEGID+++DNASVLVSVRVTVADIDGVNKPSMPYRLRVIVHED+ GRMTGYDLKYP+G
Sbjct 137 AALEGIDDVTDNASVLVSVRVTVADIDGVNKPSMPYRLRVIVHEDDQGRMTGYDLKYPNG 196
Query 241 GN 242
GN
Sbjct 197 GN 198
>gi|254821779|ref|ZP_05226780.1| hypothetical protein MintA_17737 [Mycobacterium intracellulare
ATCC 13950]
Length=196
Score = 271 bits (694), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 149/192 (78%), Positives = 167/192 (87%), Gaps = 2/192 (1%)
Query 53 PAKAAKP--ALRPVKPPPRRPAHRVLVGWLSLAAGLLAIAALAWGVTALVMQNRDADARQ 110
P +AKP +L+ +KPPPRR HR LV W+S AA L+A+ ALA V L +Q+R A A Q
Sbjct 5 PKPSAKPVGSLKSIKPPPRRQPHRALVVWISFAAALVAVGALAGCVALLAVQHRHAAAAQ 64
Query 111 ARNQRFVDAATQTVVNMFSYTPDTIDESVNRFVNGTSGPLRGMLNANNNVDNLKGLFRAT 170
AR+QRFVD ATQTVVNMFSY D IDESVNRFVNGTSGPLRGML+ANNNV+NLKGLFR+T
Sbjct 65 ARDQRFVDTATQTVVNMFSYKQDNIDESVNRFVNGTSGPLRGMLSANNNVENLKGLFRST 124
Query 171 NATSEAVVNGAALEGIDEISDNASVLVSVRVTVADIDGVNKPSMPYRLRVIVHEDENGRM 230
NATSEAVVNGAALEGID ++DNASVLVSVRVTVADIDGVNKPSMPYRLRVIVHED++GRM
Sbjct 125 NATSEAVVNGAALEGIDAVTDNASVLVSVRVTVADIDGVNKPSMPYRLRVIVHEDDSGRM 184
Query 231 TGYDLKYPDGGN 242
+GYDLKYPDGGN
Sbjct 185 SGYDLKYPDGGN 196
>gi|126437558|ref|YP_001073249.1| hypothetical protein Mjls_4994 [Mycobacterium sp. JLS]
gi|126237358|gb|ABO00759.1| conserved hypothetical protein [Mycobacterium sp. JLS]
Length=229
Score = 253 bits (646), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 147/230 (64%), Positives = 167/230 (73%), Gaps = 7/230 (3%)
Query 13 STTRRARRKASRPAGPAEGESSRPAQGAATVRAAARTESKPAKAAKPALRPVKPPPRRPA 72
STT+ RR+ASR AGPA G S TV A R E+ PA + RP PPPRR
Sbjct 7 STTKPVRRRASRAAGPANGTVSE------TVAADLRVEA-PATIRVRSPRPAAPPPRRQP 59
Query 73 HRVLVGWLSLAAGLLAIAALAWGVTALVMQNRDADARQARNQRFVDAATQTVVNMFSYTP 132
HR LV ++L + +AA+ V Q DADA QAR QRFVD A QTVVNMFSYT
Sbjct 60 HRRLVAAVALGGLAVVLAAVTTLVGVWSAQQSDADATQARQQRFVDTAAQTVVNMFSYTQ 119
Query 133 DTIDESVNRFVNGTSGPLRGMLNANNNVDNLKGLFRATNATSEAVVNGAALEGIDEISDN 192
DTIDESVNRFV+GTSGPLR ML+ NVDNLK LFR T A+SEAV+NGAALE +D+I+DN
Sbjct 120 DTIDESVNRFVDGTSGPLRDMLSQGENVDNLKALFRETEASSEAVINGAALEKLDDIADN 179
Query 193 ASVLVSVRVTVADIDGVNKPSMPYRLRVIVHEDENGRMTGYDLKYPDGGN 242
ASVLV+VRVT+ DIDG N+PS PYRLRVIVHED+NG MTGYDLKYPDGGN
Sbjct 180 ASVLVAVRVTITDIDGNNQPSQPYRLRVIVHEDDNGHMTGYDLKYPDGGN 229
>gi|108801574|ref|YP_641771.1| hypothetical protein Mmcs_4611 [Mycobacterium sp. MCS]
gi|119870728|ref|YP_940680.1| hypothetical protein Mkms_4699 [Mycobacterium sp. KMS]
gi|108771993|gb|ABG10715.1| conserved hypothetical protein [Mycobacterium sp. MCS]
gi|119696817|gb|ABL93890.1| conserved hypothetical protein [Mycobacterium sp. KMS]
Length=227
Score = 240 bits (613), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 139/234 (60%), Positives = 163/234 (70%), Gaps = 17/234 (7%)
Query 13 STTRRARRKASRPAGPAEGESSRPA----QGAATVRAAARTESKPAKAAKPALRPVKPPP 68
ST + RR+ASR AGPA G ++ P + ATVR + + P +
Sbjct 7 STAKPVRRRASRAAGPARGSATEPVGLRVEAPATVRVRSPLPAAPPPRRQ---------- 56
Query 69 RRPAHRVLVGWLSLAAGLLAIAALAWGVTALVMQNRDADARQARNQRFVDAATQTVVNMF 128
HR LV ++L LA+AA+ V Q RDADA QAR QRFVD A+QTVVNMF
Sbjct 57 ---PHRKLVAAVALGVLALALAAVTTLVGVWSAQQRDADATQAREQRFVDTASQTVVNMF 113
Query 129 SYTPDTIDESVNRFVNGTSGPLRGMLNANNNVDNLKGLFRATNATSEAVVNGAALEGIDE 188
SYT DT+DESVNRFV+GTSGPLR ML+ NVDNLK LFR T A+SEAV+NGAALE +D
Sbjct 114 SYTQDTVDESVNRFVDGTSGPLRDMLSQGENVDNLKALFRETEASSEAVINGAALEKLDP 173
Query 189 ISDNASVLVSVRVTVADIDGVNKPSMPYRLRVIVHEDENGRMTGYDLKYPDGGN 242
I+DNASVLV+VRVT+ DIDG N+PS PYRLRVIVHED+NG MTGYDLKYPDGGN
Sbjct 174 IADNASVLVAVRVTITDIDGNNQPSQPYRLRVIVHEDDNGHMTGYDLKYPDGGN 227
>gi|118469329|ref|YP_890120.1| hypothetical protein MSMEG_5894 [Mycobacterium smegmatis str.
MC2 155]
gi|118170616|gb|ABK71512.1| conserved hypothetical protein [Mycobacterium smegmatis str.
MC2 155]
Length=210
Score = 228 bits (580), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 110/144 (77%), Positives = 121/144 (85%), Gaps = 0/144 (0%)
Query 99 LVMQNRDADARQARNQRFVDAATQTVVNMFSYTPDTIDESVNRFVNGTSGPLRGMLNANN 158
LV Q R +A Q R+QRFVD A QTVVNMFSYT DTIDESVNRF++GTSGPLR M++ N
Sbjct 67 LVDQQRTYEAAQERDQRFVDTAKQTVVNMFSYTQDTIDESVNRFIDGTSGPLRDMMSQGN 126
Query 159 NVDNLKGLFRATNATSEAVVNGAALEGIDEISDNASVLVSVRVTVADIDGVNKPSMPYRL 218
N DNLK LFR T A+SEAVVNGAALE IDEI+ NASVL+SV VTV DIDGVN P+ PYRL
Sbjct 127 NADNLKALFRDTQASSEAVVNGAALEKIDEIAKNASVLISVWVTVTDIDGVNAPTKPYRL 186
Query 219 RVIVHEDENGRMTGYDLKYPDGGN 242
RVIVHED+NG MTGYDLKYPDGGN
Sbjct 187 RVIVHEDDNGHMTGYDLKYPDGGN 210
>gi|315442593|ref|YP_004075472.1| hypothetical protein Mspyr1_09460 [Mycobacterium sp. Spyr1]
gi|315260896|gb|ADT97637.1| hypothetical protein Mspyr1_09460 [Mycobacterium sp. Spyr1]
Length=224
Score = 221 bits (563), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 115/167 (69%), Positives = 135/167 (81%), Gaps = 0/167 (0%)
Query 76 LVGWLSLAAGLLAIAALAWGVTALVMQNRDADARQARNQRFVDAATQTVVNMFSYTPDTI 135
LV +S+A L+A+AAL +V + R +A QAR QRFVD A+Q+VVNMFSYT +TI
Sbjct 58 LVAVVSIAVTLVAVAALTVATALMVDRQRGIEAEQAREQRFVDTASQSVVNMFSYTQNTI 117
Query 136 DESVNRFVNGTSGPLRGMLNANNNVDNLKGLFRATNATSEAVVNGAALEGIDEISDNASV 195
DESV+RFV+GTSGPLR M+ NV+NLK LFR TNATSEAV+NGAALE IDEI+DNA+V
Sbjct 118 DESVDRFVDGTSGPLRAMMTQEGNVENLKLLFRDTNATSEAVINGAALERIDEIADNAAV 177
Query 196 LVSVRVTVADIDGVNKPSMPYRLRVIVHEDENGRMTGYDLKYPDGGN 242
LVSVRVTV D+DG N PS PYR+RVIVHED+NG MT YDLKYPDGGN
Sbjct 178 LVSVRVTVTDLDGNNAPSEPYRMRVIVHEDDNGHMTAYDLKYPDGGN 224
>gi|120406144|ref|YP_955973.1| hypothetical protein Mvan_5196 [Mycobacterium vanbaalenii PYR-1]
gi|119958962|gb|ABM15967.1| conserved hypothetical protein [Mycobacterium vanbaalenii PYR-1]
Length=225
Score = 217 bits (553), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 115/167 (69%), Positives = 132/167 (80%), Gaps = 0/167 (0%)
Query 76 LVGWLSLAAGLLAIAALAWGVTALVMQNRDADARQARNQRFVDAATQTVVNMFSYTPDTI 135
LV LS+A +A+AAL V +V Q R +A+Q R +RFVD A Q+VVNMFSYT +TI
Sbjct 59 LVAILSIAVTFVAVAALVVAVAVMVNQQRTIEAQQERERRFVDTAAQSVVNMFSYTQNTI 118
Query 136 DESVNRFVNGTSGPLRGMLNANNNVDNLKGLFRATNATSEAVVNGAALEGIDEISDNASV 195
DESV+RFVNGTSGPLR M+ NV+NLK LFR TNATSEAVVNGAALE IDEI NA+V
Sbjct 119 DESVDRFVNGTSGPLRAMMTQEGNVENLKLLFRDTNATSEAVVNGAALEKIDEIGKNAAV 178
Query 196 LVSVRVTVADIDGVNKPSMPYRLRVIVHEDENGRMTGYDLKYPDGGN 242
LVSVRVTV D+DG N PS PYR+RVI+HED+NG MT YDLKYPDGGN
Sbjct 179 LVSVRVTVTDLDGNNAPSEPYRMRVIIHEDDNGHMTAYDLKYPDGGN 225
>gi|333992264|ref|YP_004524878.1| hypothetical protein JDM601_3624 [Mycobacterium sp. JDM601]
gi|333488232|gb|AEF37624.1| conserved hypothetical protein [Mycobacterium sp. JDM601]
Length=221
Score = 191 bits (485), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 104/188 (56%), Positives = 132/188 (71%), Gaps = 2/188 (1%)
Query 53 PAKAAKPALRPVKPPPRRPAHRVLVGWLSLAAGLLAIAALAWGVTALVMQNRDADARQAR 112
P++AA A+RP PPPRR + ++ AA L+A L V L++Q+R A ++R
Sbjct 34 PSRAAVRAVRPAGPPPRRQPNARQAAVVAAAAALVASVVLGGLVAVLLVQHRHDVAAESR 93
Query 113 NQRFVDAATQTVVNMFSYTPDTIDESVNRFVNGTSGPLRGMLNANNNVDNLKGLFRATNA 172
+QRFVD A QTV+NM++YTPDTI+E V+RFV GTSGPLR + N DNLK L R T
Sbjct 94 DQRFVDTAVQTVLNMYTYTPDTINEQVDRFVGGTSGPLRDTMAGN--ADNLKALLRETKH 151
Query 173 TSEAVVNGAALEGIDEISDNASVLVSVRVTVADIDGVNKPSMPYRLRVIVHEDENGRMTG 232
+SEAV+N AALE D+++ NASVLV++R T D DGVNKPS PY LR+IVHED G MT
Sbjct 152 SSEAVINAAALETTDDVAGNASVLVAMRATATDADGVNKPSQPYALRIIVHEDNAGNMTA 211
Query 233 YDLKYPDG 240
YDLK+PDG
Sbjct 212 YDLKWPDG 219
>gi|145222154|ref|YP_001132832.1| hypothetical protein Mflv_1562 [Mycobacterium gilvum PYR-GCK]
gi|145214640|gb|ABP44044.1| conserved hypothetical protein [Mycobacterium gilvum PYR-GCK]
Length=116
Score = 188 bits (477), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 90/116 (78%), Positives = 101/116 (88%), Gaps = 0/116 (0%)
Query 127 MFSYTPDTIDESVNRFVNGTSGPLRGMLNANNNVDNLKGLFRATNATSEAVVNGAALEGI 186
MFSYT +TIDESV+RFV+GTSGPLR M+ NV+NLK LFR TNATSEAV+NGAALE I
Sbjct 1 MFSYTQNTIDESVDRFVDGTSGPLRAMMTQEGNVENLKLLFRDTNATSEAVINGAALERI 60
Query 187 DEISDNASVLVSVRVTVADIDGVNKPSMPYRLRVIVHEDENGRMTGYDLKYPDGGN 242
DEI+DNA+VLVSVRVTV D+DG N PS PYR+RVIVHED+NG MT YDLKYPDGGN
Sbjct 61 DEIADNAAVLVSVRVTVTDLDGNNAPSEPYRMRVIVHEDDNGHMTAYDLKYPDGGN 116
>gi|169631225|ref|YP_001704874.1| MCE-family protein [Mycobacterium abscessus ATCC 19977]
gi|169243192|emb|CAM64220.1| Hypothetical MCE-family protein [Mycobacterium abscessus]
Length=225
Score = 171 bits (433), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 109/236 (47%), Positives = 146/236 (62%), Gaps = 23/236 (9%)
Query 11 QQSTTRRARRKASRPAGPAEGESSRPAQGAATVRAAARTE--SKPAKAAKPALRPVKPPP 68
++S ++ RR+A+RPAGP S+ P + RTE SKP P
Sbjct 5 KKSASQTTRRRAARPAGPTGEVSAEPISVSL-----GRTEALSKP--------EPTVADS 51
Query 69 RRPAHRVLVGWLSLAAGLLAIAALAWGVTALVM---QNRDADARQARNQRFVDAATQTVV 125
RRP + G L A L+ + A GV +M Q+RD D R AR+QRFVD A QTV
Sbjct 52 RRPGN--TRGVLRAATVLVVVLVGALGVALALMGRAQHRD-DLRAARDQRFVDTAVQTVT 108
Query 126 NMFSYTPDTIDESVNRFVNGTSGPLRGMLNANNNVDNLKGLFRATNATSEAVVNGAALEG 185
NM +Y+PD+ID++V++FVN TSGPLRG N +N NLK L+ T +SE V+ A+LE
Sbjct 109 NMMTYSPDSIDKNVDQFVNSTSGPLRGTFNPDNTA-NLKALYHQTGTSSEVVIKKASLES 167
Query 186 IDEISDNASVLVSVRVTVADID-GVNKPSMPYRLRVIVHEDENGRMTGYDLKYPDG 240
IDE+S AS+L+S RVT+ + D GVN+PS YR+R+IV ED+ G MT YDL++PDG
Sbjct 168 IDEVSKKASILISARVTLTNADSGVNEPSKSYRMRMIVAEDQQGNMTAYDLRWPDG 223
>gi|111021676|ref|YP_704648.1| hypothetical protein RHA1_ro04704 [Rhodococcus jostii RHA1]
gi|110821206|gb|ABG96490.1| conserved hypothetical protein [Rhodococcus jostii RHA1]
Length=247
Score = 78.6 bits (192), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 74/235 (32%), Positives = 107/235 (46%), Gaps = 29/235 (12%)
Query 17 RARRKASRPAGPAEG--ESSRPAQGAATVRAAARTESKPAKAAKPALRPVKPPPRRPAHR 74
R RR+A R AGP G E+ +P A A +++ AK A P P P P R
Sbjct 26 RGRRRAVRHAGPPVGGTEAPKPVVLAKPADMHAAPDAEKVSTAK-AASPDAPAPDAPKQR 84
Query 75 VLVGWLSLAAGLLAIAALAWGVTALVM------------QNRDADARQARNQRFVDAATQ 122
+ L LAWGVTA+V+ + A R R Q FVD A Q
Sbjct 85 RTLKSL-----------LAWGVTAVVVVALVVAAVVLLLDQQSARERDDRRQAFVDTARQ 133
Query 123 TVVNMFSYTPDTIDESVNRFVNGTSGPLRGMLNANNNVDNLKGLFRATNATSEAVVNGAA 182
TV+N+ + P+T E V+R + G SG + D G+ R N T+E V A
Sbjct 134 TVLNLTTIHPETAKEDVDRIIAGASGQF--LEEFQGREDPFVGVVRDANVTTEGQVVEAG 191
Query 183 LEGIDEISDNASVLVSVRVTVADIDGVNKPSMPYRLRVIVHEDENGRMTGYDLKY 237
+E E S +A+VLV+ R V+ + +R+RV V D +G++T +++
Sbjct 192 VENGSETSISANVLVAARTMVSSKEQPEPSPRDFRMRVTVS-DVDGKLTASKVEF 245
>gi|312138216|ref|YP_004005552.1| mce associated protein mas2a [Rhodococcus equi 103S]
gi|311887555|emb|CBH46867.1| putative Mce associated protein Mas2A [Rhodococcus equi 103S]
Length=262
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 73/254 (29%), Positives = 115/254 (46%), Gaps = 39/254 (15%)
Query 16 RRARRKASRPAGP--AEGESSR---PAQGAATVRAAARTESKPAKAAKP----ALRP--- 63
R++RR+ASRPAGP AE SS+ PA +V RT PA P A P
Sbjct 14 RQSRRRASRPAGPSGAEPTSSQVTTPATTTPSVPEPGRTAENPATTVPPQGTVAQTPEPT 73
Query 64 ------------------VKPPPRRPAHRVLVGWLSL--AAGLLAIAALAWGVTALVMQN 103
P P + G L L +AG++ IA +A +T L++
Sbjct 74 TVGSGVTAAGEASSEAAETDPVPSESLGKRSKGQLVLGVSAGIVIIALVAV-ITVLLVDR 132
Query 104 RDADARQARNQRFVDAATQTVVNMFSYTPDTIDESVNRFVNGTSGPLRGMLNANNNVDNL 163
+ A A +R+VD A T +N+ + D+ E +++ GT+GPLR L+A +++
Sbjct 133 KQASDLAAERERYVDIARATAINISTLRSDSAKEDLDKLFEGTTGPLRADLDA--RLEDF 190
Query 164 KGLFRATNATSEAVVNGAALEGIDEISDNASVLVSVRVTVADIDGVNKPSMPYRLRVIVH 223
+ N ++ V A LE D + V V AD V+K +RLRV++
Sbjct 191 ANVVSQLNVSTTGEVVEAGLESEDGNCKTSLVAVKANQKNADEAPVDK---SFRLRVVIC 247
Query 224 EDENGRMTGYDLKY 237
DE G++ ++++
Sbjct 248 -DEGGKLLASNVEF 260
>gi|226364213|ref|YP_002781995.1| hypothetical protein ROP_48030 [Rhodococcus opacus B4]
gi|226242702|dbj|BAH53050.1| hypothetical membrane protein [Rhodococcus opacus B4]
Length=247
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 50/158 (32%), Positives = 77/158 (49%), Gaps = 15/158 (9%)
Query 92 LAWGVTALVM------------QNRDADARQARNQRFVDAATQTVVNMFSYTPDTIDESV 139
LAWG+TA+V+ R A R R Q FVD A QTV+N+ + P+T + V
Sbjct 91 LAWGITAVVIVALVVAAVVLLLDQRSARERDDRRQAFVDTARQTVLNLTTIHPETAKDDV 150
Query 140 NRFVNGTSGPLRGMLNANNNVDNLKGLFRATNATSEAVVNGAALEGIDEISDNASVLVSV 199
R V G SG + D G+ + N T+E V A +E E S +A+VLV+
Sbjct 151 ARIVAGASGQF--LEEFQGREDPFVGVVQDANVTTEGEVVEAGIENGTETSISANVLVAA 208
Query 200 RVTVADIDGVNKPSMPYRLRVIVHEDENGRMTGYDLKY 237
R V+ + +R+RV + D +G++T +++
Sbjct 209 RTMVSSKEQPEPSPRDFRMRVTIS-DVDGKLTASKVEF 245
>gi|333918563|ref|YP_004492144.1| hypothetical protein AS9A_0892 [Amycolicicoccus subflavus DQS3-9A1]
gi|333480784|gb|AEF39344.1| hypothetical protein AS9A_0892 [Amycolicicoccus subflavus DQS3-9A1]
Length=208
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/173 (28%), Positives = 81/173 (47%), Gaps = 10/173 (5%)
Query 65 KPPPRRPAHRVLVGWLSLAAGLLAIAALAWGVTALVMQNRDADARQARNQRFVDAATQTV 124
+ PP+ A + +LA L+ I L L Q R ADAR A+ Q ++ AA QTV
Sbjct 44 QAPPKSRARTI-----TLAVALVVIVGLGAAAGYLFFQLRAADARDAQRQDYLQAARQTV 98
Query 125 VNMFSYTPDTIDESVNRFVNGTSGPLRGMLNANNNVDNLKGLFRATNATSEAVVNGAALE 184
+N+ S TP+T + ++R + +G + +D + N +E + A LE
Sbjct 99 LNLTSITPETARDDIDRILATATGEFEREFDG--RIDPFVSVVVEANVATEGEIIEAGLE 156
Query 185 GIDEISDNASVLVSVRVTVADIDGVNKPSMPYRLRVIVHEDENGRMTGYDLKY 237
E +VL++ R V ++ +RLRV + E E+G M ++++
Sbjct 157 S--ETDSGGTVLLAARTYVTNVAQTEPQPRDFRLRVSIVE-EDGVMKTSNVEF 206
>gi|325674878|ref|ZP_08154565.1| hypothetical protein HMPREF0724_12347 [Rhodococcus equi ATCC
33707]
gi|325554464|gb|EGD24139.1| hypothetical protein HMPREF0724_12347 [Rhodococcus equi ATCC
33707]
Length=197
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/158 (29%), Positives = 82/158 (52%), Gaps = 7/158 (4%)
Query 80 LSLAAGLLAIAALAWGVTALVMQNRDADARQARNQRFVDAATQTVVNMFSYTPDTIDESV 139
L ++AG++ IA +A +T L++ + A A +R+VD A T +N+ + D+ E +
Sbjct 45 LGVSAGIVIIALVAV-ITVLLVDRKQASDLAAERERYVDIARATAINISTLRSDSAKEDL 103
Query 140 NRFVNGTSGPLRGMLNANNNVDNLKGLFRATNATSEAVVNGAALEGIDEISDNASVLVSV 199
++ GT+GPLR L+A +++ + N ++ V A LE D + V V
Sbjct 104 DKLFEGTTGPLRADLDA--RLEDFANVVSQLNVSTTGEVVEAGLESEDGNCKTSLVAVKA 161
Query 200 RVTVADIDGVNKPSMPYRLRVIVHEDENGRMTGYDLKY 237
AD V+K +RLRV++ DE G++ ++++
Sbjct 162 NQKNADEAPVDK---SFRLRVVIC-DEGGKLLASNVEF 195
>gi|226361011|ref|YP_002778789.1| hypothetical protein ROP_15970 [Rhodococcus opacus B4]
gi|226239496|dbj|BAH49844.1| hypothetical membrane protein [Rhodococcus opacus B4]
Length=189
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 49/159 (31%), Positives = 75/159 (48%), Gaps = 11/159 (6%)
Query 66 PPPRRPAHRVLVGWLS-LAAGLLAIAALAWGVTALVMQNRDADARQARNQRFVDAATQTV 124
P PR PA V LS LA LA++ +G T +R A+ + VDAA Q V
Sbjct 26 PEPRTPAVTAGVAILSVLALAFLAVSGY-FGYT-----HRQAEQEAQQRSEIVDAARQGV 79
Query 125 VNMFSYTPDTIDESVNRFVNGTSGPLRGMLNANNNVDNLKGLFRATNATSEAVVNGAALE 184
VN+ + + DE V + ++G++G R A + +L + + S V AA+E
Sbjct 80 VNLTTMDFERADEDVQKVLDGSAGEFRDEFEARSK--DLIAVMQEARVKSVGEVRQAAIE 137
Query 185 GIDEISDNASVLVSVRVTVADIDGVNKPSMPYRLRVIVH 223
D D+A VLV+V V++ G + R+RV +
Sbjct 138 RQD--GDSADVLVAVAQKVSNAGGAAEEPRGQRMRVTMQ 174
>gi|333992103|ref|YP_004524717.1| hypothetical protein JDM601_3463 [Mycobacterium sp. JDM601]
gi|333488071|gb|AEF37463.1| conserved hypothetical protein [Mycobacterium sp. JDM601]
Length=264
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/177 (25%), Positives = 78/177 (45%), Gaps = 9/177 (5%)
Query 62 RPVKPPPRRPAHRVLVGWLSLAAGLLAIAALAWGVTALVMQNRDADARQARNQRFVDAAT 121
P + P + R +GW++ +LAI ++ +RD RQ + + AA
Sbjct 92 EPAEQPRKSIGIRRQLGWVAATLAVLAIGGFLAVDVLMLSHHRDVALRQHQLGEYAAAAR 151
Query 122 QTVVNMFSYTPDTIDESVNRFVNGTSGPLRGMLNANNNVDNLKGLFRATNATSEAVVN-G 180
Q VV + S +T+D+ V ++ ++G + A+ G F S+ V +
Sbjct 152 QGVVTLMSLNYETVDDDVKAILDNSTGEFKKDFEAH------AGDFAKVARESKTVTSVD 205
Query 181 AALEGIDEISDN-ASVLVSVRVTVADIDGVNKPSMPYRLRV-IVHEDENGRMTGYDL 235
+ G++ +SDN A VLV+ V + G + +RL V + E + +M+ D
Sbjct 206 TVVSGVESMSDNEAVVLVAATTKVTNTAGAKEEPRSWRLTVHLAREGDQVKMSKVDF 262
>gi|145223113|ref|YP_001133791.1| hypothetical protein Mflv_2526 [Mycobacterium gilvum PYR-GCK]
gi|145215599|gb|ABP45003.1| hypothetical protein Mflv_2526 [Mycobacterium gilvum PYR-GCK]
Length=295
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/175 (26%), Positives = 82/175 (47%), Gaps = 19/175 (10%)
Query 69 RRPAHRVLVGWLSLAAGLLAIAALAWGVTALV-------MQNRDADARQARNQRFVDAAT 121
RRP GW S+ L+ + A+ G AL+ +++RDA+ + +N + AA
Sbjct 130 RRP------GWASVGVALVLVIAV-LGTAALLAVSGYMRLEHRDAENLRQQNAEYAAAAR 182
Query 122 QTVVNMFSYTPDTIDESVNRFVNGTSGPLRGMLNANNNVDNLKGLFRATNATSEAVVNGA 181
Q+VV + S + +E V R ++ ++G + + + + + + +E VN
Sbjct 183 QSVVTLMSLDFNKAEEDVQRIIDNSTGQFKD--DFESQAAEFVKVAQDSKVVTEVTVNST 240
Query 182 ALEGIDEISDNASVLVSVRVTVADIDGVNKPSMPYRLRV-IVHEDENGRMTGYDL 235
A+E + D A VLV+ V + G ++ +RL V +V ED +M+ +
Sbjct 241 AVERM--TGDGAEVLVAASSRVTNTAGADQEPRTWRLSVSLVREDGQIKMSKVEF 293
>gi|315443570|ref|YP_004076449.1| hypothetical protein Mspyr1_19530 [Mycobacterium sp. Spyr1]
gi|315261873|gb|ADT98614.1| hypothetical protein Mspyr1_19530 [Mycobacterium sp. Spyr1]
Length=309
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/175 (26%), Positives = 82/175 (47%), Gaps = 19/175 (10%)
Query 69 RRPAHRVLVGWLSLAAGLLAIAALAWGVTALV-------MQNRDADARQARNQRFVDAAT 121
RRP GW S+ L+ + A+ G AL+ +++RDA+ + +N + AA
Sbjct 144 RRP------GWASVGVALVLVIAV-LGTAALLAVSGYMRLEHRDAENLRQQNAEYAAAAR 196
Query 122 QTVVNMFSYTPDTIDESVNRFVNGTSGPLRGMLNANNNVDNLKGLFRATNATSEAVVNGA 181
Q+VV + S + +E V R ++ ++G + + + + + + +E VN
Sbjct 197 QSVVTLMSLDFNKAEEDVQRIIDNSTGQFKD--DFESQAAEFVKVAQDSKVVTEVTVNST 254
Query 182 ALEGIDEISDNASVLVSVRVTVADIDGVNKPSMPYRLRV-IVHEDENGRMTGYDL 235
A+E + D A VLV+ V + G ++ +RL V +V ED +M+ +
Sbjct 255 AVERM--TGDGAEVLVAASSRVTNTAGADQEPRTWRLSVSLVREDGQIKMSKVEF 307
>gi|54022510|ref|YP_116752.1| hypothetical protein nfa5430 [Nocardia farcinica IFM 10152]
gi|54014018|dbj|BAD55388.1| hypothetical protein [Nocardia farcinica IFM 10152]
Length=315
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/143 (26%), Positives = 66/143 (47%), Gaps = 5/143 (3%)
Query 95 GVTALVMQNRDADARQARNQRFVDAATQTVVNMFSYTPDTIDESVNRFVNGTSGPLRGML 154
G V+ RD D R R +V A Q ++N+ + D+ E ++R ++ SG +
Sbjct 176 GAVFSVVTVRDIDQRAERRTEYVQTARQAILNLTTIRADSAKEDIDRILSLASGQFKTEF 235
Query 155 NANNNVDNLKGLFRATNATSEAVVNGAALEGIDEISDNASVLVSVRVTVADIDGVNKPSM 214
+ VD + + S + AALE D+ D+A VLV+ + T+ + +
Sbjct 236 --DGRVDPFLSIVQQAKVVSNGEIVEAALESDDD--DSAKVLVAAKQTLTNAGQAEPQTR 291
Query 215 PYRLRVIVHEDENGRMTGYDLKY 237
YR RV V + G +T ++++
Sbjct 292 YYRFRVTVTRSDAG-LTASNVEF 313
>gi|41406866|ref|NP_959702.1| hypothetical protein MAP0768c [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|41395216|gb|AAS03085.1| hypothetical protein MAP_0768c [Mycobacterium avium subsp. paratuberculosis
K-10]
Length=298
Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/149 (31%), Positives = 74/149 (50%), Gaps = 10/149 (6%)
Query 76 LVGWLSLAAG---LLAIAAL-AWGVTALVMQNRDADARQARNQRFVDAATQTVVNMFSYT 131
L G ++AAG LLA A+L A G +V Q+R A + + + AA Q VV + S
Sbjct 138 LPGRRAIAAGAGILLASASLGASGY--MVWQHRVAAHNRQLSDEYAAAARQDVVLLMSLN 195
Query 132 PDTIDESVNRFVNGTSGPLRGMLNANNNVDNLKGLFRATNATSEAVVNGAALEGIDEISD 191
E + R ++ +G L+ L A + + K + A+S+A V +E + D
Sbjct 196 AQHAREDIQRVIDACTGDLKKQLEATSGLMLQKA--EESKASSKATVEAVGVESMSH--D 251
Query 192 NASVLVSVRVTVADIDGVNKPSMPYRLRV 220
+A VLV+ + V + D N+P + +R+ V
Sbjct 252 SAVVLVAAKTDVTNADNTNRPPVVWRISV 280
>gi|183984145|ref|YP_001852436.1| anchored-membrane serine/threonine-protein kinase PknF [Mycobacterium
marinum M]
gi|183177471|gb|ACC42581.1| anchored-membrane serine/threonine-protein kinase PknF [Mycobacterium
marinum M]
Length=495
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/129 (28%), Positives = 61/129 (48%), Gaps = 4/129 (3%)
Query 102 QNRDADARQARNQRFVDAATQTVVNMFSYTPDTIDESVNRFVNGTSGPLRGMLNANNNVD 161
Q A A + Q +VD A Q +++ S P TID + R ++G++G A+ +
Sbjct 363 QTTAAPAEAPQWQPYVDHAKQFAISLTSVNPQTIDADIQRILDGSTGAFHSDF-ADKSAQ 421
Query 162 NLKGLFRATNATSEAVVNGAALEGIDEISDNASVLVSVRVTVADIDGVNKPSMPYRLRVI 221
+ + A +AT + GA LE I A V+VSV + GV + +RLR+
Sbjct 422 FKQSIVDAGSAT-QGKATGAGLESIS--GTTAHVVVSVTSNITKSTGVQQEPRQWRLRIQ 478
Query 222 VHEDENGRM 230
+ + ++ +
Sbjct 479 IEKIDDAYL 487
>gi|118619584|ref|YP_907916.1| anchored-membrane serine/threonine-protein kinase PknF [Mycobacterium
ulcerans Agy99]
gi|118571694|gb|ABL06445.1| anchored-membrane serine/threonine-protein kinase PknF [Mycobacterium
ulcerans Agy99]
Length=495
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/129 (28%), Positives = 61/129 (48%), Gaps = 4/129 (3%)
Query 102 QNRDADARQARNQRFVDAATQTVVNMFSYTPDTIDESVNRFVNGTSGPLRGMLNANNNVD 161
Q A A + Q +VD A Q +++ S P TID + R ++G++G A+ +
Sbjct 363 QTTAAPAEAPQWQPYVDHAKQFAISLTSVNPQTIDADIQRILDGSTGAFHSDF-ADKSAQ 421
Query 162 NLKGLFRATNATSEAVVNGAALEGIDEISDNASVLVSVRVTVADIDGVNKPSMPYRLRVI 221
+ + A +AT + GA LE I A V+VSV + GV + +RLR+
Sbjct 422 FKQSIVDAGSAT-QGKATGAGLESIS--GTTAHVVVSVTSNITKSTGVQQEPRQWRLRIQ 478
Query 222 VHEDENGRM 230
+ + ++ +
Sbjct 479 IEKIDDAYL 487
>gi|118464562|ref|YP_880216.1| hypothetical protein MAV_0956 [Mycobacterium avium 104]
gi|118165849|gb|ABK66746.1| conserved hypothetical protein [Mycobacterium avium 104]
Length=247
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/159 (26%), Positives = 73/159 (46%), Gaps = 12/159 (7%)
Query 62 RPVKPPPRRPAHRVLVGWLSLAAGLLAIAALAWGVTALVMQNRDADARQARNQRFVDAAT 121
R ++ P RR ++ AG+L +A +V Q+R A + + + AA
Sbjct 83 RWLRLPGRRA--------IAAGAGILLASASLGASGYMVWQHRVAAHNRQLSDEYAAAAR 134
Query 122 QTVVNMFSYTPDTIDESVNRFVNGTSGPLRGMLNANNNVDNLKGLFRATNATSEAVVNGA 181
Q VV + S E + R ++ +G L+ L A + + K + A+S+A V
Sbjct 135 QDVVLLMSLNAQHAREDIQRVIDACTGDLKKQLEATSGLMLQKA--EESKASSKATVEAV 192
Query 182 ALEGIDEISDNASVLVSVRVTVADIDGVNKPSMPYRLRV 220
+E + D+A VLV+ + V + D N+P + +R+ V
Sbjct 193 GVESMSH--DSAVVLVAAKTDVTNADNTNRPPVVWRISV 229
>gi|226349629|ref|YP_002776743.1| hypothetical membrane protein [Rhodococcus opacus B4]
gi|226245544|dbj|BAH55891.1| hypothetical membrane protein [Rhodococcus opacus B4]
Length=204
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/153 (25%), Positives = 70/153 (46%), Gaps = 6/153 (3%)
Query 85 GLLAIAALAWGVTALVMQNRDADARQARNQRFVDAATQTVVNMFSYTPDTIDESVNRFVN 144
G + +A WGV + R DA AR+ +D ATQ N+ + ++DE + + +
Sbjct 56 GAIVLAGSVWGVRSW-SDWRTTDAAAARDVSILDTATQMSTNLVTLRHQSVDEDIKKVAD 114
Query 145 GTSGPLRGMLNANNNVDNLKGLFRATNATSEAVVNGAALEGIDEISDNASVLVSVRVTVA 204
GT+GP ++ + S V A + ID D+A+VL +V TV
Sbjct 115 GTTGPFHDQFATSSG--GFGDVLNQGQVESTGEVKSAGI--IDSSDDHATVLAAVTSTVK 170
Query 205 DIDGVNKPSMPYRLRVIVHEDENGRMTGYDLKY 237
+ + + YR+++ + + +GR D+++
Sbjct 171 NTEAPDGEMRVYRMKLTL-DLVDGRWLVSDVEF 202
>gi|336461213|gb|EGO40089.1| hypothetical protein MAPs_32980 [Mycobacterium avium subsp. paratuberculosis
S397]
Length=253
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/137 (28%), Positives = 65/137 (48%), Gaps = 4/137 (2%)
Query 84 AGLLAIAALAWGVTALVMQNRDADARQARNQRFVDAATQTVVNMFSYTPDTIDESVNRFV 143
AG+L +A +V Q+R A + + + AA Q VV + S E + R +
Sbjct 103 AGILLASASLGASGYMVWQHRVAAHNRQLSDEYAAAARQDVVLLMSLNAQHAREDIQRVI 162
Query 144 NGTSGPLRGMLNANNNVDNLKGLFRATNATSEAVVNGAALEGIDEISDNASVLVSVRVTV 203
+ +G L+ L A + + K + A+S+A V +E + D+A VLV+ + V
Sbjct 163 DACTGDLKKQLEATSGLMLQKA--EESKASSKATVEAVGVESMSH--DSAVVLVAAKTDV 218
Query 204 ADIDGVNKPSMPYRLRV 220
+ D N+P + +R+ V
Sbjct 219 TNADNTNRPPVVWRISV 235
>gi|254773845|ref|ZP_05215361.1| hypothetical protein MaviaA2_04092 [Mycobacterium avium subsp.
avium ATCC 25291]
Length=246
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/137 (28%), Positives = 65/137 (48%), Gaps = 4/137 (2%)
Query 84 AGLLAIAALAWGVTALVMQNRDADARQARNQRFVDAATQTVVNMFSYTPDTIDESVNRFV 143
AG+L +A +V Q+R A + + + AA Q VV + S E + R +
Sbjct 96 AGILLASASLGASGYMVWQHRVAAHNRQLSDEYAAAARQDVVLLMSLNAQHAREDIQRVI 155
Query 144 NGTSGPLRGMLNANNNVDNLKGLFRATNATSEAVVNGAALEGIDEISDNASVLVSVRVTV 203
+ +G L+ L A + + K + A+S+A V +E + D+A VLV+ + V
Sbjct 156 DACTGDLKKQLEATSGLMLQKA--EESKASSKATVEAVGVESMSH--DSAVVLVAAKTDV 211
Query 204 ADIDGVNKPSMPYRLRV 220
+ D N+P + +R+ V
Sbjct 212 TNADNTNRPPVVWRISV 228
>gi|118619078|ref|YP_907410.1| hypothetical protein MUL_3858 [Mycobacterium ulcerans Agy99]
gi|118571188|gb|ABL05939.1| conserved hypothetical alanine-rich protein [Mycobacterium ulcerans
Agy99]
Length=269
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 45/157 (29%), Positives = 75/157 (48%), Gaps = 11/157 (7%)
Query 84 AGLLAIAALAWGVTALVMQNR-DADARQARNQRFVDAATQTVVNMFSYTPDTIDESVNRF 142
A LL + A G++A + N RQ R + F D A VVNM S + E V R
Sbjct 119 AALLIVFGFA-GLSAYFVWNHGQVTQRQERAEAFTDGAKTGVVNMISLDFNRAKEDVQRV 177
Query 143 VNGTSGPLRGMLNANNNVDNLKGLFRATNATSEAVVNGAALEGIDEISDNASVLVSV--R 200
++ ++G + ++ + + + +E V+ AA+E ++ A VL+S R
Sbjct 178 IDSSTGEFKEEFHS--RAADFTKVVEQSKVVTEGTVHAAAVESME--GHTAVVLISATSR 233
Query 201 VTVADIDGVNKPSMPYRLRVIVHEDENGRMTGYDLKY 237
VT DG +P + +RLRV V E E+G+ +++
Sbjct 234 VTNGG-DGKQEPRI-WRLRVTVTE-EDGQYKMSKVEF 267
>gi|41408208|ref|NP_961044.1| hypothetical protein MAP2110c [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|41396563|gb|AAS04427.1| hypothetical protein MAP_2110c [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|336461653|gb|EGO40516.1| hypothetical protein MAPs_28150 [Mycobacterium avium subsp. paratuberculosis
S397]
Length=203
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 44/145 (31%), Positives = 69/145 (48%), Gaps = 13/145 (8%)
Query 82 LAAGLLAIAALAWGVTALV----MQNRDADARQARNQRFVDAATQTVVNMFSYTPDTIDE 137
LA G + +AALA G++ + Q DA QAR FV A+Q VN+ + +D
Sbjct 52 LAVGAVMVAALA-GLSGWLGYRAYQQHDA---QARRNLFVATASQGAVNLTTINYTQVDR 107
Query 138 SVNRFVNGTSGPLRGMLNANNNVDNLKGLFRATNATSEAVVNGAALEGIDEISDNASVLV 197
V R ++ +G R + + +A + SE V A LE + D+A VLV
Sbjct 108 DVQRILDSATGAFRDEFEQRSK--PFAEVVKAAQSKSEGTVTDAGLES--QRGDSAQVLV 163
Query 198 SVRVTVADIDGVNKPSMPYRLRVIV 222
+V V + G ++P +R+R+ V
Sbjct 164 AVAVK-SHTAGGDEPPREWRMRIEV 187
>gi|319950499|ref|ZP_08024412.1| hypothetical protein ES5_12997 [Dietzia cinnamea P4]
gi|319435858|gb|EFV91065.1| hypothetical protein ES5_12997 [Dietzia cinnamea P4]
Length=239
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/138 (29%), Positives = 68/138 (50%), Gaps = 17/138 (12%)
Query 69 RRPAHRVLVG----WLSLAAGLLAIAALAWGVTALVMQNRDADARQARN-----QRFVDA 119
RRP +VG WL++ A ++ +A LA T +V R A+AR A+ + D
Sbjct 30 RRPG---VVGTVPRWLAVLAAIILVAGLA---TLVVFGVRYAEARSAQEVASEREAASDV 83
Query 120 ATQTVVNMFSYTPDTIDESVNRFVNGTSGPLRGMLNANNNVDNLKGLFRATNATSEAVVN 179
A Q +VN FS+ +D+S+ + ++G + D+++ A + A V+
Sbjct 84 AAQVIVNAFSFDHRNVDDSLEQLAEASTGEF--LTEQEQYADDVRTRVVEQKAVTTATVS 141
Query 180 GAALEGIDEISDNASVLV 197
A+E +D + +A+VLV
Sbjct 142 HTAVETLDLEAGDAAVLV 159
>gi|254774792|ref|ZP_05216308.1| hypothetical protein MaviaA2_08985 [Mycobacterium avium subsp.
avium ATCC 25291]
Length=203
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/145 (31%), Positives = 68/145 (47%), Gaps = 13/145 (8%)
Query 82 LAAGLLAIAALAWGVTALV----MQNRDADARQARNQRFVDAATQTVVNMFSYTPDTIDE 137
LA G + +AALA G++ + Q DA QAR FV A Q VN+ + +D
Sbjct 52 LAVGAVMVAALA-GLSGWLGYRAYQQHDA---QARRNLFVATARQGAVNLTTINYTQVDR 107
Query 138 SVNRFVNGTSGPLRGMLNANNNVDNLKGLFRATNATSEAVVNGAALEGIDEISDNASVLV 197
V R ++ +G R + + +A + SE V A LE + D+A VLV
Sbjct 108 DVQRILDSATGAFRDEFEQRSK--PFAEVVKAAQSKSEGTVTDAGLES--QRGDSAQVLV 163
Query 198 SVRVTVADIDGVNKPSMPYRLRVIV 222
+V V + G ++P +R+R+ V
Sbjct 164 AVAVK-SHTAGGDEPPREWRMRIEV 187
>gi|183983966|ref|YP_001852257.1| hypothetical protein MMAR_3994 [Mycobacterium marinum M]
gi|183177292|gb|ACC42402.1| conserved hypothetical alanine-rich protein [Mycobacterium marinum
M]
Length=274
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/156 (28%), Positives = 73/156 (47%), Gaps = 9/156 (5%)
Query 84 AGLLAIAALAWGVTALVMQNR-DADARQARNQRFVDAATQTVVNMFSYTPDTIDESVNRF 142
A LL + A G++A + N RQ R + F D A VVNM S + E V R
Sbjct 124 AALLIVFGFA-GLSAYFVWNHSQVTQRQERAEAFTDGAKTGVVNMTSLDFNKAKEDVQRV 182
Query 143 VNGTSGPLRGMLNANNNVDNLKGLFRATNATSEAVVNGAALEGIDEISDNASVLVSVRVT 202
++ ++G + + + + + +E V+ AA+E ++ A VL+S
Sbjct 183 IDSSTGEFKEEFQS--RAADFTKVVEQSKVVTEGTVHAAAVESME--GHTAVVLISATSH 238
Query 203 VAD-IDGVNKPSMPYRLRVIVHEDENGRMTGYDLKY 237
V + DG +P + +RLRV V E E+G+ +++
Sbjct 239 VTNGGDGKQEPRI-WRLRVTVTE-EDGQYKMSKVEF 272
>gi|183984655|ref|YP_001852946.1| hypothetical protein MMAR_4687 [Mycobacterium marinum M]
gi|183177981|gb|ACC43091.1| conserved hypothetical membrane protein [Mycobacterium marinum
M]
Length=327
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/176 (27%), Positives = 80/176 (46%), Gaps = 6/176 (3%)
Query 50 ESKPAKAAKPALRPVKPPPRRPAHRVLVGWLSLAAGLLAIAALAWGVTALVMQNRDADAR 109
ES+ + A + R + RRP L L++ L+ +AALA G +V+Q+RDA +
Sbjct 145 ESEADELADESERSRRGLLRRPKLSTLTAALAV---LVILAALA-GSAYMVLQHRDATRQ 200
Query 110 QARNQRFVDAATQTVVNMFSYTPDTIDESVNRFVNGTSGPLRGMLNANNNVDNLKGLFRA 169
+ R F AA Q V+ + S + + R ++ ++G + L ++ D+ + +
Sbjct 201 RERVAEFAAAARQGVITLTSLDFQDAKQGIGRILDNSTGSFKDELLKSS--DDFIQVVQQ 258
Query 170 TNATSEAVVNGAALEGIDEISDNASVLVSVRVTVADIDGVNKPSMPYRLRVIVHED 225
+ V A++ D+A VLV+ V + G K YRL V + D
Sbjct 259 AQVVEQGTVQAVAVDRNSMTDDSAVVLVASTSEVTNAAGAKKDPRKYRLIVTITRD 314
>gi|118462830|ref|YP_881286.1| hypothetical protein MAV_2070 [Mycobacterium avium 104]
gi|118164117|gb|ABK65014.1| conserved hypothetical protein [Mycobacterium avium 104]
Length=203
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/145 (31%), Positives = 68/145 (47%), Gaps = 13/145 (8%)
Query 82 LAAGLLAIAALAWGVTALV----MQNRDADARQARNQRFVDAATQTVVNMFSYTPDTIDE 137
LA G + +AALA G++ + Q DA QAR FV A Q VN+ + +D
Sbjct 52 LAVGAVMVAALA-GLSGWLGYRAYQQHDA---QARRNLFVATARQGAVNLTTINYTQVDR 107
Query 138 SVNRFVNGTSGPLRGMLNANNNVDNLKGLFRATNATSEAVVNGAALEGIDEISDNASVLV 197
V R ++ +G R + + +A + SE V A LE + D+A VLV
Sbjct 108 DVQRILDSATGAFRDEFEQRSK--PFAEVVKAAQSKSEGTVTDAGLES--QRGDSAQVLV 163
Query 198 SVRVTVADIDGVNKPSMPYRLRVIV 222
+V V + G ++P +R+R+ V
Sbjct 164 AVAVK-SHTAGGDEPPREWRMRIEV 187
>gi|118616177|ref|YP_904509.1| hypothetical protein MUL_0306 [Mycobacterium ulcerans Agy99]
gi|118568287|gb|ABL03038.1| conserved hypothetical membrane protein [Mycobacterium ulcerans
Agy99]
Length=300
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/176 (27%), Positives = 80/176 (46%), Gaps = 6/176 (3%)
Query 50 ESKPAKAAKPALRPVKPPPRRPAHRVLVGWLSLAAGLLAIAALAWGVTALVMQNRDADAR 109
ES+ + A + R + RRP L L++ L+ +AALA G +V+Q+RDA +
Sbjct 118 ESEADELADESERSRRGLLRRPKLSTLTAALAV---LVILAALA-GSAYMVLQHRDATRQ 173
Query 110 QARNQRFVDAATQTVVNMFSYTPDTIDESVNRFVNGTSGPLRGMLNANNNVDNLKGLFRA 169
+ R F AA Q V+ + S + + R ++ ++G + L ++ D+ + +
Sbjct 174 RERVAEFAAAARQGVITLTSLDFQDAKQGIGRILDNSTGSFKDELLKSS--DDFIQVVQQ 231
Query 170 TNATSEAVVNGAALEGIDEISDNASVLVSVRVTVADIDGVNKPSMPYRLRVIVHED 225
+ V A++ D+A VLV+ V + G K YRL V + D
Sbjct 232 AQVVEQGTVQAVAVDRNSMTDDSAVVLVASTSEVTNAAGAKKDPRKYRLIVTITRD 287
>gi|296169587|ref|ZP_06851207.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295895853|gb|EFG75548.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length=199
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/152 (27%), Positives = 76/152 (50%), Gaps = 10/152 (6%)
Query 78 GWLSLAAGL-LAIAALAWGVTALVMQ-NRDADARQARNQRFVDAATQTVVNMFSYTPDTI 135
G ++LA G + + +A G + V+Q +R A A++ R FV AA Q VV + S
Sbjct 41 GRMTLALGAAVVLMCIALGASGYVVQYHRTAVAQRQRAAEFVAAARQDVVFLMSIDAGRA 100
Query 136 DESVNRFVNGTSGPLRG--MLNANNNVDNLKGLFRATNATSEAVVNGAALEGIDEISDNA 193
+ V R ++ +GPL+ +L A + V ++ + +++ V A+E + + D+A
Sbjct 101 RDDVQRIIDDATGPLKAGLLLEAEDLVKAVE----QSRVSTKVDVKAVAVESMTD--DSA 154
Query 194 SVLVSVRVTVADIDGVNKPSMPYRLRVIVHED 225
+VLV+ + V + D P +R+ + D
Sbjct 155 TVLVAAKAEVVNPDKSKPPPRSWRVIATIQRD 186
>gi|118472928|ref|YP_884765.1| hypothetical protein MSMEG_0352 [Mycobacterium smegmatis str.
MC2 155]
gi|118174215|gb|ABK75111.1| conserved hypothetical protein [Mycobacterium smegmatis str.
MC2 155]
Length=200
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/143 (24%), Positives = 66/143 (47%), Gaps = 4/143 (2%)
Query 81 SLAAGLLAIAALAWGVTALVMQNRDADARQARNQRFVDAATQTVVNMFSYTPDTIDESVN 140
+L G+L +A + LV Q + A+ Q N+ + A + VN+ + + I E +
Sbjct 47 ALVIGVLLLAIVGGATGWLVWQTQRAEQDQRMNEMLLQAGREAAVNLTTMDFEHIREDIQ 106
Query 141 RFVNGTSGPLRGMLNANNNVDNLKGLFRATNATSEAVVNGAALEGIDEISDNASVLVSVR 200
R ++G++G + + T + +E V A +E + +D+A VLV+V
Sbjct 107 RVLDGSTGTFYDEFE--QRAPAFEEVVTKTQSKTEGTVTEAGIESVS--ADSARVLVAVS 162
Query 201 VTVADIDGVNKPSMPYRLRVIVH 223
V ++I + +R+R+ V
Sbjct 163 VKTSNIAAPEQRPRLWRMRIDVQ 185
>gi|296169604|ref|ZP_06851224.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295895870|gb|EFG75565.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length=307
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 43/150 (29%), Positives = 69/150 (46%), Gaps = 6/150 (4%)
Query 79 WLSLAAGL---LAIAALAWGVTALVMQNRDADARQARNQRFVDAATQTVVNMFSYTPDTI 135
W +LAA L + IAALA G ++ ++RDA ++ FV AA Q VV + S +
Sbjct 148 WSTLAASLAVLVIIAALA-GSGYMINEHRDAVQQRQHAAEFVAAARQGVVTLTSLDFNNA 206
Query 136 DESVNRFVNGTSGPLRGMLNANNNVDNLKGLFRATNATSEAVVNGAALEGIDEISDNASV 195
+ V R + ++G + + D+ + + S+ V AA++ D+A V
Sbjct 207 KQGVQRILENSTGSFKD--DFVKMADDFTKVVEQSKVISQGSVQAAAVDLDTMTKDSAVV 264
Query 196 LVSVRVTVADIDGVNKPSMPYRLRVIVHED 225
LV+ V + G + YRL V V D
Sbjct 265 LVASTSDVTNAAGAKQDPRNYRLIVTVARD 294
>gi|119867600|ref|YP_937552.1| hypothetical protein Mkms_1553 [Mycobacterium sp. KMS]
gi|119693689|gb|ABL90762.1| conserved hypothetical protein [Mycobacterium sp. KMS]
Length=166
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/147 (26%), Positives = 65/147 (45%), Gaps = 6/147 (4%)
Query 80 LSLAAGLLAIAALAWGVTALVMQNRDADAR--QARNQRFVDAATQTVVNMFSYTPDTIDE 137
+ LA +A + G A + R D R QA FV+AA Q +N+ + ++D
Sbjct 10 IRLAVAFSVVAIVGLGGVAGWLGYRIVDDRRAQAELNEFVEAARQGAINLTTIDHTSVDA 69
Query 138 SVNRFVNGTSGPLRGMLNANNNVDNLKGLFRATNATSEAVVNGAALEGIDEISDNASVLV 197
+ R ++ ++G R + + + +TSE V A LE + D A VLV
Sbjct 70 DIKRILDSSTGTFRDDFEKRSQ--TFAEVVKQAQSTSEGTVTSAGLESRE--GDTAQVLV 125
Query 198 SVRVTVADIDGVNKPSMPYRLRVIVHE 224
+ V +++ + +R+RV V +
Sbjct 126 VMSVNMSNAGAAEQSPRSWRMRVGVEQ 152
>gi|108798500|ref|YP_638697.1| hypothetical protein Mmcs_1530 [Mycobacterium sp. MCS]
gi|108768919|gb|ABG07641.1| conserved hypothetical protein [Mycobacterium sp. MCS]
Length=182
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 37/147 (26%), Positives = 65/147 (45%), Gaps = 6/147 (4%)
Query 80 LSLAAGLLAIAALAWGVTALVMQNRDADAR--QARNQRFVDAATQTVVNMFSYTPDTIDE 137
+ LA +A + G A + R D R QA FV+AA Q +N+ + ++D
Sbjct 26 IRLAVAFSVVAIVGLGGVAGWLGYRIVDDRRAQAELNEFVEAARQGAINLTTIDHTSVDA 85
Query 138 SVNRFVNGTSGPLRGMLNANNNVDNLKGLFRATNATSEAVVNGAALEGIDEISDNASVLV 197
+ R ++ ++G R + + + +TSE V A LE + D A VLV
Sbjct 86 DIKRILDSSTGTFRDDFEKRSQ--TFAEVVKQAQSTSEGTVTSAGLESRE--GDTAQVLV 141
Query 198 SVRVTVADIDGVNKPSMPYRLRVIVHE 224
+ V +++ + +R+RV V +
Sbjct 142 VMSVNMSNAGAAEQSPRSWRMRVGVEQ 168
Lambda K H
0.314 0.129 0.365
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 333756066840
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40