BLASTP 2.2.25+


Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.



Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
           15,229,318 sequences; 5,219,829,388 total letters



Query= Rv3498c

Length=350
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

gi|15610634|ref|NP_218015.1|  MCE-family protein MCE4B [Mycobacte...   701    0.0   
gi|308371368|ref|ZP_07667149.1|  MCE-family protein mce4B [Mycoba...   674    0.0   
gi|118463448|ref|YP_879938.1|  virulence factor Mce [Mycobacteriu...   587    1e-165
gi|254773614|ref|ZP_05215130.1|  virulence factor Mce family prot...   585    3e-165
gi|336458451|gb|EGO37425.1|  virulence factor Mce family protein ...   583    1e-164
gi|183984954|ref|YP_001853245.1|  MCE-family protein Mce4B [Mycob...   583    2e-164
gi|41406663|ref|NP_959499.1|  hypothetical protein MAP0565 [Mycob...   582    2e-164
gi|342862237|ref|ZP_08718879.1|  virulence factor Mce [Mycobacter...   582    3e-164
gi|118619251|ref|YP_907583.1|  MCE-family protein Mce4B [Mycobact...   580    1e-163
gi|296166532|ref|ZP_06848963.1|  virulence factor mce family prot...   573    2e-161
gi|254822748|ref|ZP_05227749.1|  virulence factor Mce family prot...   573    2e-161
gi|240170053|ref|ZP_04748712.1|  MCE-family protein Mce4B [Mycoba...   563    1e-158
gi|333992269|ref|YP_004524883.1|  MCE-family protein Mce4B [Mycob...   475    6e-132
gi|118473663|ref|YP_890125.1|  virulence factor Mce family protei...   474    7e-132
gi|108801579|ref|YP_641776.1|  virulence factor MCE-like protein ...   470    1e-130
gi|145222149|ref|YP_001132827.1|  virulence factor Mce family pro...   454    1e-125
gi|315442588|ref|YP_004075467.1|  virulence factor Mce family pro...   452    4e-125
gi|126437563|ref|YP_001073254.1|  virulence factor Mce family pro...   451    1e-124
gi|120406149|ref|YP_955978.1|  virulence factor Mce family protei...   449    4e-124
gi|169631230|ref|YP_001704879.1|  MCE-family protein [Mycobacteri...   446    2e-123
gi|54022505|ref|YP_116747.1|  putative Mce family protein [Nocard...   310    2e-82 
gi|111021671|ref|YP_704643.1|  MCE family protein [Rhodococcus jo...   310    3e-82 
gi|226364208|ref|YP_002781990.1|  Mce family protein [Rhodococcus...   309    4e-82 
gi|312138211|ref|YP_004005547.1|  mce family protein mce2b [Rhodo...   308    7e-82 
gi|229494577|ref|ZP_04388340.1|  virulence factor Mce family prot...   306    2e-81 
gi|226304450|ref|YP_002764408.1|  Mce family protein [Rhodococcus...   302    5e-80 
gi|333918568|ref|YP_004492149.1|  MCE family protein [Amycolicico...   301    1e-79 
gi|118466491|ref|YP_881279.1|  virulence factor Mce [Mycobacteriu...   286    3e-75 
gi|41408213|ref|NP_961049.1|  hypothetical protein MAP2115c [Myco...   286    5e-75 
gi|336461658|gb|EGO40521.1|  virulence factor Mce family protein ...   285    7e-75 
gi|262203808|ref|YP_003275016.1|  virulence factor Mce family pro...   285    1e-74 
gi|254774787|ref|ZP_05216303.1|  virulence factor Mce family prot...   282    6e-74 
gi|226306855|ref|YP_002766815.1|  Mce family protein [Rhodococcus...   271    1e-70 
gi|229492751|ref|ZP_04386552.1|  virulence factor Mce family prot...   270    4e-70 
gi|343926108|ref|ZP_08765620.1|  putative Mce family protein [Gor...   265    1e-68 
gi|226361935|ref|YP_002779713.1|  Mce family protein [Rhodococcus...   261    8e-68 
gi|319951380|ref|ZP_08025205.1|  virulence factor Mce family prot...   256    3e-66 
gi|126436741|ref|YP_001072432.1|  virulence factor Mce family pro...   254    2e-65 
gi|240170396|ref|ZP_04749055.1|  MCE-family protein [Mycobacteriu...   254    2e-65 
gi|183982887|ref|YP_001851178.1|  MCE-family protein Mce3B [Mycob...   253    2e-65 
gi|118473503|ref|YP_889049.1|  virulence factor Mce family protei...   253    4e-65 
gi|342857463|ref|ZP_08714119.1|  virulence factor Mce [Mycobacter...   253    5e-65 
gi|254773838|ref|ZP_05215354.1|  virulence factor Mce family prot...   252    6e-65 
gi|41406858|ref|NP_959694.1|  hypothetical protein MAP0760 [Mycob...   251    9e-65 
gi|145224740|ref|YP_001135418.1|  virulence factor Mce family pro...   251    1e-64 
gi|333992112|ref|YP_004524726.1|  MCE-family protein [Mycobacteri...   251    1e-64 
gi|145221305|ref|YP_001131983.1|  virulence factor Mce family pro...   251    1e-64 
gi|336461220|gb|EGO40096.1|  virulence factor Mce family protein ...   251    2e-64 
gi|145222690|ref|YP_001133368.1|  virulence factor Mce family pro...   250    2e-64 
gi|342857627|ref|ZP_08714283.1|  virulence factor Mce [Mycobacter...   250    2e-64 


>gi|15610634|ref|NP_218015.1| MCE-family protein MCE4B [Mycobacterium tuberculosis H37Rv]
 gi|15843110|ref|NP_338147.1| virulence factor mce family protein [Mycobacterium tuberculosis 
CDC1551]
 gi|31794674|ref|NP_857167.1| MCE-family protein MCE4B [Mycobacterium bovis AF2122/97]
 77 more sequence titles
 Length=350

 Score =  701 bits (1808),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 350/350 (100%), Positives = 350/350 (100%), Gaps = 0/350 (0%)

Query  1    MAGSGVPSHRSMVIKVSVFAVVMLLVAAGLVVVFGDFRFGPTTVYHATFTDASRLKAGQK  60
            MAGSGVPSHRSMVIKVSVFAVVMLLVAAGLVVVFGDFRFGPTTVYHATFTDASRLKAGQK
Sbjct  1    MAGSGVPSHRSMVIKVSVFAVVMLLVAAGLVVVFGDFRFGPTTVYHATFTDASRLKAGQK  60

Query  61   VRIAGVPVGSVKAVKLNPDHSIDVAFAIDRSYTLYSSTRAVIRYENLVGDRFLEITSGPG  120
            VRIAGVPVGSVKAVKLNPDHSIDVAFAIDRSYTLYSSTRAVIRYENLVGDRFLEITSGPG
Sbjct  61   VRIAGVPVGSVKAVKLNPDHSIDVAFAIDRSYTLYSSTRAVIRYENLVGDRFLEITSGPG  120

Query  121  ELRKLPPGGTINVAHTQPALDLDALLGGLRPVLKGFDADKINTITSAVIELLQGQGGPLA  180
            ELRKLPPGGTINVAHTQPALDLDALLGGLRPVLKGFDADKINTITSAVIELLQGQGGPLA
Sbjct  121  ELRKLPPGGTINVAHTQPALDLDALLGGLRPVLKGFDADKINTITSAVIELLQGQGGPLA  180

Query  181  NVLADTGAFSAALGARDQLIGEVITNLNAVLATVDAKSAQFSASVDQLQQLVSGLAKNRD  240
            NVLADTGAFSAALGARDQLIGEVITNLNAVLATVDAKSAQFSASVDQLQQLVSGLAKNRD
Sbjct  181  NVLADTGAFSAALGARDQLIGEVITNLNAVLATVDAKSAQFSASVDQLQQLVSGLAKNRD  240

Query  241  PIAGAISPLASTTTDLTELLRNSRRPLQGILENARPLATELDNRKAEVNNDIEQLGEDYL  300
            PIAGAISPLASTTTDLTELLRNSRRPLQGILENARPLATELDNRKAEVNNDIEQLGEDYL
Sbjct  241  PIAGAISPLASTTTDLTELLRNSRRPLQGILENARPLATELDNRKAEVNNDIEQLGEDYL  300

Query  301  RLSALGSYGAFFNIYFCSVTIKINGPAGSDILLPIGGQPDPSKGRCAFAK  350
            RLSALGSYGAFFNIYFCSVTIKINGPAGSDILLPIGGQPDPSKGRCAFAK
Sbjct  301  RLSALGSYGAFFNIYFCSVTIKINGPAGSDILLPIGGQPDPSKGRCAFAK  350


>gi|308371368|ref|ZP_07667149.1| MCE-family protein mce4B [Mycobacterium tuberculosis SUMu003]
 gi|308329033|gb|EFP17884.1| MCE-family protein mce4B [Mycobacterium tuberculosis SUMu003]
Length=338

 Score =  674 bits (1738),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 337/338 (99%), Positives = 338/338 (100%), Gaps = 0/338 (0%)

Query  13   VIKVSVFAVVMLLVAAGLVVVFGDFRFGPTTVYHATFTDASRLKAGQKVRIAGVPVGSVK  72
            +IKVSVFAVVMLLVAAGLVVVFGDFRFGPTTVYHATFTDASRLKAGQKVRIAGVPVGSVK
Sbjct  1    MIKVSVFAVVMLLVAAGLVVVFGDFRFGPTTVYHATFTDASRLKAGQKVRIAGVPVGSVK  60

Query  73   AVKLNPDHSIDVAFAIDRSYTLYSSTRAVIRYENLVGDRFLEITSGPGELRKLPPGGTIN  132
            AVKLNPDHSIDVAFAIDRSYTLYSSTRAVIRYENLVGDRFLEITSGPGELRKLPPGGTIN
Sbjct  61   AVKLNPDHSIDVAFAIDRSYTLYSSTRAVIRYENLVGDRFLEITSGPGELRKLPPGGTIN  120

Query  133  VAHTQPALDLDALLGGLRPVLKGFDADKINTITSAVIELLQGQGGPLANVLADTGAFSAA  192
            VAHTQPALDLDALLGGLRPVLKGFDADKINTITSAVIELLQGQGGPLANVLADTGAFSAA
Sbjct  121  VAHTQPALDLDALLGGLRPVLKGFDADKINTITSAVIELLQGQGGPLANVLADTGAFSAA  180

Query  193  LGARDQLIGEVITNLNAVLATVDAKSAQFSASVDQLQQLVSGLAKNRDPIAGAISPLAST  252
            LGARDQLIGEVITNLNAVLATVDAKSAQFSASVDQLQQLVSGLAKNRDPIAGAISPLAST
Sbjct  181  LGARDQLIGEVITNLNAVLATVDAKSAQFSASVDQLQQLVSGLAKNRDPIAGAISPLAST  240

Query  253  TTDLTELLRNSRRPLQGILENARPLATELDNRKAEVNNDIEQLGEDYLRLSALGSYGAFF  312
            TTDLTELLRNSRRPLQGILENARPLATELDNRKAEVNNDIEQLGEDYLRLSALGSYGAFF
Sbjct  241  TTDLTELLRNSRRPLQGILENARPLATELDNRKAEVNNDIEQLGEDYLRLSALGSYGAFF  300

Query  313  NIYFCSVTIKINGPAGSDILLPIGGQPDPSKGRCAFAK  350
            NIYFCSVTIKINGPAGSDILLPIGGQPDPSKGRCAFAK
Sbjct  301  NIYFCSVTIKINGPAGSDILLPIGGQPDPSKGRCAFAK  338


>gi|118463448|ref|YP_879938.1| virulence factor Mce [Mycobacterium avium 104]
 gi|118164735|gb|ABK65632.1| virulence factor Mce family protein [Mycobacterium avium 104]
Length=350

 Score =  587 bits (1512),  Expect = 1e-165, Method: Compositional matrix adjust.
 Identities = 294/350 (84%), Positives = 324/350 (93%), Gaps = 0/350 (0%)

Query  1    MAGSGVPSHRSMVIKVSVFAVVMLLVAAGLVVVFGDFRFGPTTVYHATFTDASRLKAGQK  60
            MAGSG+PSHRSMVIKVS+FA  MLLV+AGLVVVFGDFRFGP + YHATF D SRLKAGQK
Sbjct  1    MAGSGMPSHRSMVIKVSIFAAAMLLVSAGLVVVFGDFRFGPESTYHATFVDVSRLKAGQK  60

Query  61   VRIAGVPVGSVKAVKLNPDHSIDVAFAIDRSYTLYSSTRAVIRYENLVGDRFLEITSGPG  120
            VRIAGVPVG+V+AVKLN D++IDV F +D+ YTLYSSTRAVIRYENLVGDR+LEITSGPG
Sbjct  61   VRIAGVPVGAVEAVKLNRDNTIDVTFGVDKRYTLYSSTRAVIRYENLVGDRYLEITSGPG  120

Query  121  ELRKLPPGGTINVAHTQPALDLDALLGGLRPVLKGFDADKINTITSAVIELLQGQGGPLA  180
            ELRKLP GGTIN  HTQPALDLDALLGGLRPVLKG DADK+NTI+SAVI+LLQGQGG L+
Sbjct  121  ELRKLPAGGTINSQHTQPALDLDALLGGLRPVLKGLDADKVNTISSAVIQLLQGQGGALS  180

Query  181  NVLADTGAFSAALGARDQLIGEVITNLNAVLATVDAKSAQFSASVDQLQQLVSGLAKNRD  240
            NVLADT AF++ALG RDQLIG+VI NLN VL TVD +SAQFSASVDQLQQL++GLAK++D
Sbjct  181  NVLADTSAFTSALGQRDQLIGDVINNLNTVLTTVDQRSAQFSASVDQLQQLITGLAKHKD  240

Query  241  PIAGAISPLASTTTDLTELLRNSRRPLQGILENARPLATELDNRKAEVNNDIEQLGEDYL  300
             IAGAI PLASTTTDLTELL+NSRRPLQG+LEN RPLATELDNRKAEVNND+EQLGEDYL
Sbjct  241  DIAGAIPPLASTTTDLTELLQNSRRPLQGVLENTRPLATELDNRKAEVNNDVEQLGEDYL  300

Query  301  RLSALGSYGAFFNIYFCSVTIKINGPAGSDILLPIGGQPDPSKGRCAFAK  350
            RL+ALG+YG+FFNIYFCSVTIKINGPAGSDILLP+GGQ DPSKGRCAF K
Sbjct  301  RLAALGAYGSFFNIYFCSVTIKINGPAGSDILLPLGGQVDPSKGRCAFVK  350


>gi|254773614|ref|ZP_05215130.1| virulence factor Mce family protein [Mycobacterium avium subsp. 
avium ATCC 25291]
Length=350

 Score =  585 bits (1509),  Expect = 3e-165, Method: Compositional matrix adjust.
 Identities = 294/350 (84%), Positives = 323/350 (93%), Gaps = 0/350 (0%)

Query  1    MAGSGVPSHRSMVIKVSVFAVVMLLVAAGLVVVFGDFRFGPTTVYHATFTDASRLKAGQK  60
            MAGSG+PSHRSMVIKVS+FA  MLLV+AGLVVVFGDFRFGP + YHATF D SRLKAGQK
Sbjct  1    MAGSGMPSHRSMVIKVSIFAAAMLLVSAGLVVVFGDFRFGPESTYHATFVDVSRLKAGQK  60

Query  61   VRIAGVPVGSVKAVKLNPDHSIDVAFAIDRSYTLYSSTRAVIRYENLVGDRFLEITSGPG  120
            VRIAGVPVG+V+AVKLN D++IDV F +D+ YTLYSSTRAVIRYENLVGDR LEITSGPG
Sbjct  61   VRIAGVPVGAVEAVKLNRDNTIDVTFGVDKRYTLYSSTRAVIRYENLVGDRHLEITSGPG  120

Query  121  ELRKLPPGGTINVAHTQPALDLDALLGGLRPVLKGFDADKINTITSAVIELLQGQGGPLA  180
            ELRKLP GGTIN  HTQPALDLDALLGGLRPVLKG DADK+NTI+SAVI+LLQGQGG L+
Sbjct  121  ELRKLPAGGTINSQHTQPALDLDALLGGLRPVLKGLDADKVNTISSAVIQLLQGQGGALS  180

Query  181  NVLADTGAFSAALGARDQLIGEVITNLNAVLATVDAKSAQFSASVDQLQQLVSGLAKNRD  240
            NVLADT AF++ALG RDQLIG+VI NLN VL TVD +SAQFSASVDQLQQL++GLAK++D
Sbjct  181  NVLADTSAFTSALGQRDQLIGDVINNLNTVLTTVDQRSAQFSASVDQLQQLITGLAKHKD  240

Query  241  PIAGAISPLASTTTDLTELLRNSRRPLQGILENARPLATELDNRKAEVNNDIEQLGEDYL  300
             IAGAI PLASTTTDLTELL+NSRRPLQG+LEN RPLATELDNRKAEVNND+EQLGEDYL
Sbjct  241  DIAGAIPPLASTTTDLTELLQNSRRPLQGVLENTRPLATELDNRKAEVNNDVEQLGEDYL  300

Query  301  RLSALGSYGAFFNIYFCSVTIKINGPAGSDILLPIGGQPDPSKGRCAFAK  350
            RL+ALG+YG+FFNIYFCSVTIKINGPAGSDILLP+GGQ DPSKGRCAF K
Sbjct  301  RLAALGAYGSFFNIYFCSVTIKINGPAGSDILLPLGGQVDPSKGRCAFVK  350


>gi|336458451|gb|EGO37425.1| virulence factor Mce family protein [Mycobacterium avium subsp. 
paratuberculosis S397]
Length=350

 Score =  583 bits (1504),  Expect = 1e-164, Method: Compositional matrix adjust.
 Identities = 292/350 (84%), Positives = 323/350 (93%), Gaps = 0/350 (0%)

Query  1    MAGSGVPSHRSMVIKVSVFAVVMLLVAAGLVVVFGDFRFGPTTVYHATFTDASRLKAGQK  60
            MAGSG+PSHRSM+IKVS+FA  MLLV+AGLVVVFGDFRFGP + YHATF D SRLKAGQK
Sbjct  1    MAGSGMPSHRSMMIKVSIFAAAMLLVSAGLVVVFGDFRFGPESTYHATFVDVSRLKAGQK  60

Query  61   VRIAGVPVGSVKAVKLNPDHSIDVAFAIDRSYTLYSSTRAVIRYENLVGDRFLEITSGPG  120
            VRIAGVPVG+V+AVKLN D++IDV F +D+ YTLYSSTRAVIRYENLVGDR+LEITSGPG
Sbjct  61   VRIAGVPVGAVEAVKLNRDNTIDVTFGVDKRYTLYSSTRAVIRYENLVGDRYLEITSGPG  120

Query  121  ELRKLPPGGTINVAHTQPALDLDALLGGLRPVLKGFDADKINTITSAVIELLQGQGGPLA  180
            ELRKLP GGTIN  HTQPALDLDALLGGLRPVLKG DADK+NTI+SAVI+LLQGQGG L+
Sbjct  121  ELRKLPAGGTINSQHTQPALDLDALLGGLRPVLKGLDADKVNTISSAVIQLLQGQGGALS  180

Query  181  NVLADTGAFSAALGARDQLIGEVITNLNAVLATVDAKSAQFSASVDQLQQLVSGLAKNRD  240
            NVLADT AF++ALG RDQLIG+VI NLN VL TVD +SAQFSASVDQLQQL++GLAK++D
Sbjct  181  NVLADTSAFTSALGQRDQLIGDVINNLNTVLTTVDQRSAQFSASVDQLQQLITGLAKHKD  240

Query  241  PIAGAISPLASTTTDLTELLRNSRRPLQGILENARPLATELDNRKAEVNNDIEQLGEDYL  300
             IAG I PLASTTTDLTELL+NSRRPLQG+LEN RPLATELDNRKAEVNND+EQLGEDYL
Sbjct  241  DIAGVIPPLASTTTDLTELLQNSRRPLQGVLENTRPLATELDNRKAEVNNDVEQLGEDYL  300

Query  301  RLSALGSYGAFFNIYFCSVTIKINGPAGSDILLPIGGQPDPSKGRCAFAK  350
            RL+ALG+YG+FFNIYFCSVTIKINGPAGSDILLP+GGQ DPSKGRCAF K
Sbjct  301  RLAALGAYGSFFNIYFCSVTIKINGPAGSDILLPLGGQVDPSKGRCAFVK  350


>gi|183984954|ref|YP_001853245.1| MCE-family protein Mce4B [Mycobacterium marinum M]
 gi|183178280|gb|ACC43390.1| MCE-family protein Mce4B [Mycobacterium marinum M]
Length=350

 Score =  583 bits (1502),  Expect = 2e-164, Method: Compositional matrix adjust.
 Identities = 306/350 (88%), Positives = 330/350 (95%), Gaps = 0/350 (0%)

Query  1    MAGSGVPSHRSMVIKVSVFAVVMLLVAAGLVVVFGDFRFGPTTVYHATFTDASRLKAGQK  60
            MA  G+PSHRSMVIKVSVF VVML+VAA LVVVFGDFRFGPT VYHATFT+ASRLKAGQK
Sbjct  1    MASGGMPSHRSMVIKVSVFGVVMLVVAAALVVVFGDFRFGPTNVYHATFTNASRLKAGQK  60

Query  61   VRIAGVPVGSVKAVKLNPDHSIDVAFAIDRSYTLYSSTRAVIRYENLVGDRFLEITSGPG  120
            VRIAGVPVGSVKAV LNPD++IDVAFAIDR+YT+YSSTRAVIRYENLVGDR+LEITSGPG
Sbjct  61   VRIAGVPVGSVKAVDLNPDNTIDVAFAIDRAYTMYSSTRAVIRYENLVGDRYLEITSGPG  120

Query  121  ELRKLPPGGTINVAHTQPALDLDALLGGLRPVLKGFDADKINTITSAVIELLQGQGGPLA  180
            ELRKLPPGGTIN  HTQPALDLDALLGGLRPVLKG DADK+NT+T AVIELLQGQGG LA
Sbjct  121  ELRKLPPGGTINAEHTQPALDLDALLGGLRPVLKGLDADKVNTVTGAVIELLQGQGGALA  180

Query  181  NVLADTGAFSAALGARDQLIGEVITNLNAVLATVDAKSAQFSASVDQLQQLVSGLAKNRD  240
            NVLADT AFS AL  RDQLIG+ ITNLN+VLATVD +SAQFSASVDQLQQL++GLA+N+D
Sbjct  181  NVLADTSAFSTALARRDQLIGDTITNLNSVLATVDQRSAQFSASVDQLQQLITGLAENKD  240

Query  241  PIAGAISPLASTTTDLTELLRNSRRPLQGILENARPLATELDNRKAEVNNDIEQLGEDYL  300
             IAGAI PLASTTTDLTELL+NSRRPLQG+LENARPLATELDNRK EVNND+EQLGEDYL
Sbjct  241  VIAGAIPPLASTTTDLTELLKNSRRPLQGLLENARPLATELDNRKDEVNNDVEQLGEDYL  300

Query  301  RLSALGSYGAFFNIYFCSVTIKINGPAGSDILLPIGGQPDPSKGRCAFAK  350
            RL+ALGSYGAFFNIYFC+VTIKINGPAGSDIL+P+GGQPDPSKGRCAFAK
Sbjct  301  RLAALGSYGAFFNIYFCTVTIKINGPAGSDILIPMGGQPDPSKGRCAFAK  350


>gi|41406663|ref|NP_959499.1| hypothetical protein MAP0565 [Mycobacterium avium subsp. paratuberculosis 
K-10]
 gi|41395012|gb|AAS02882.1| hypothetical protein MAP_0565 [Mycobacterium avium subsp. paratuberculosis 
K-10]
Length=350

 Score =  582 bits (1501),  Expect = 2e-164, Method: Compositional matrix adjust.
 Identities = 292/350 (84%), Positives = 323/350 (93%), Gaps = 0/350 (0%)

Query  1    MAGSGVPSHRSMVIKVSVFAVVMLLVAAGLVVVFGDFRFGPTTVYHATFTDASRLKAGQK  60
            MAGSG+PSHRSM+IKVS+FA  MLLV+AGLVVVFGDFRFGP + YHATF D SRLKAGQK
Sbjct  1    MAGSGMPSHRSMMIKVSIFAAAMLLVSAGLVVVFGDFRFGPESTYHATFVDVSRLKAGQK  60

Query  61   VRIAGVPVGSVKAVKLNPDHSIDVAFAIDRSYTLYSSTRAVIRYENLVGDRFLEITSGPG  120
            V IAGVPVG+V+AVKLN D++IDV F +D+ YTLYSSTRAVIRYENLVGDR+LEITSGPG
Sbjct  61   VCIAGVPVGAVEAVKLNRDNTIDVTFGVDKRYTLYSSTRAVIRYENLVGDRYLEITSGPG  120

Query  121  ELRKLPPGGTINVAHTQPALDLDALLGGLRPVLKGFDADKINTITSAVIELLQGQGGPLA  180
            ELRKLP GGTIN  HTQPALDLDALLGGLRPVLKG DADK+NTI+SAVI+LLQGQGG L+
Sbjct  121  ELRKLPAGGTINSQHTQPALDLDALLGGLRPVLKGLDADKVNTISSAVIQLLQGQGGALS  180

Query  181  NVLADTGAFSAALGARDQLIGEVITNLNAVLATVDAKSAQFSASVDQLQQLVSGLAKNRD  240
            NVLADT AF++ALG RDQLIG+VI NLN VL TVD +SAQFSASVDQLQQL++GLAK++D
Sbjct  181  NVLADTSAFTSALGQRDQLIGDVINNLNTVLTTVDQRSAQFSASVDQLQQLITGLAKHKD  240

Query  241  PIAGAISPLASTTTDLTELLRNSRRPLQGILENARPLATELDNRKAEVNNDIEQLGEDYL  300
             IAGAI PLASTTTDLTELL+NSRRPLQG+LEN RPLATELDNRKAEVNND+EQLGEDYL
Sbjct  241  DIAGAIPPLASTTTDLTELLQNSRRPLQGVLENTRPLATELDNRKAEVNNDVEQLGEDYL  300

Query  301  RLSALGSYGAFFNIYFCSVTIKINGPAGSDILLPIGGQPDPSKGRCAFAK  350
            RL+ALG+YG+FFNIYFCSVTIKINGPAGSDILLP+GGQ DPSKGRCAF K
Sbjct  301  RLAALGAYGSFFNIYFCSVTIKINGPAGSDILLPLGGQVDPSKGRCAFVK  350


>gi|342862237|ref|ZP_08718879.1| virulence factor Mce [Mycobacterium colombiense CECT 3035]
 gi|342130315|gb|EGT83635.1| virulence factor Mce [Mycobacterium colombiense CECT 3035]
Length=350

 Score =  582 bits (1500),  Expect = 3e-164, Method: Compositional matrix adjust.
 Identities = 291/350 (84%), Positives = 321/350 (92%), Gaps = 0/350 (0%)

Query  1    MAGSGVPSHRSMVIKVSVFAVVMLLVAAGLVVVFGDFRFGPTTVYHATFTDASRLKAGQK  60
            MAGSG+PSHR M+ KVS+FAV MLLV+AGLVVVFGDFRFGP + YHATFTD SRLK GQK
Sbjct  1    MAGSGMPSHREMITKVSIFAVAMLLVSAGLVVVFGDFRFGPESTYHATFTDVSRLKPGQK  60

Query  61   VRIAGVPVGSVKAVKLNPDHSIDVAFAIDRSYTLYSSTRAVIRYENLVGDRFLEITSGPG  120
            VRIAGVPVG+V  +KLNPD++IDV F +D+ YTLYSSTRAVIRYENLVGDRFLEITSGPG
Sbjct  61   VRIAGVPVGAVSGIKLNPDNTIDVKFGVDKRYTLYSSTRAVIRYENLVGDRFLEITSGPG  120

Query  121  ELRKLPPGGTINVAHTQPALDLDALLGGLRPVLKGFDADKINTITSAVIELLQGQGGPLA  180
            ELRKLP G TIN  HTQPALDLDALLGGLRPVLKG DADK+NTI+ AVI+LLQGQGG L+
Sbjct  121  ELRKLPAGATINSQHTQPALDLDALLGGLRPVLKGLDADKVNTISGAVIQLLQGQGGALS  180

Query  181  NVLADTGAFSAALGARDQLIGEVITNLNAVLATVDAKSAQFSASVDQLQQLVSGLAKNRD  240
            +VLADT AFS+ALG RDQLIG+VI NLN VL TVD +SAQFSASVDQLQQL++GLA+++D
Sbjct  181  DVLADTSAFSSALGQRDQLIGDVINNLNTVLTTVDQRSAQFSASVDQLQQLITGLAEHKD  240

Query  241  PIAGAISPLASTTTDLTELLRNSRRPLQGILENARPLATELDNRKAEVNNDIEQLGEDYL  300
             IAGAI PLASTTTDLTELL+NSRRPLQGILEN RPLATE+DNRKAEVNND+EQLGEDYL
Sbjct  241  DIAGAIPPLASTTTDLTELLKNSRRPLQGILENTRPLATEIDNRKAEVNNDVEQLGEDYL  300

Query  301  RLSALGSYGAFFNIYFCSVTIKINGPAGSDILLPIGGQPDPSKGRCAFAK  350
            RLSALG+YG+FFNIYFCSVTIKINGPAGSDILLP+GGQ DPSKGRCAFAK
Sbjct  301  RLSALGAYGSFFNIYFCSVTIKINGPAGSDILLPLGGQVDPSKGRCAFAK  350


>gi|118619251|ref|YP_907583.1| MCE-family protein Mce4B [Mycobacterium ulcerans Agy99]
 gi|118571361|gb|ABL06112.1| MCE-family protein Mce4B [Mycobacterium ulcerans Agy99]
Length=350

 Score =  580 bits (1495),  Expect = 1e-163, Method: Compositional matrix adjust.
 Identities = 304/350 (87%), Positives = 329/350 (94%), Gaps = 0/350 (0%)

Query  1    MAGSGVPSHRSMVIKVSVFAVVMLLVAAGLVVVFGDFRFGPTTVYHATFTDASRLKAGQK  60
            MA  G+PSHRSMVIKVSVF VVML++AA LVVVFGDFRFGPT VYHATFT+ASRLKAGQK
Sbjct  1    MASGGMPSHRSMVIKVSVFGVVMLVLAAALVVVFGDFRFGPTNVYHATFTNASRLKAGQK  60

Query  61   VRIAGVPVGSVKAVKLNPDHSIDVAFAIDRSYTLYSSTRAVIRYENLVGDRFLEITSGPG  120
            VRIAGVPVGSVKAV LNPD++IDVAFAIDR+YT+YSSTRAVIRYENLVGDR+LEITSGP 
Sbjct  61   VRIAGVPVGSVKAVDLNPDNTIDVAFAIDRAYTMYSSTRAVIRYENLVGDRYLEITSGPD  120

Query  121  ELRKLPPGGTINVAHTQPALDLDALLGGLRPVLKGFDADKINTITSAVIELLQGQGGPLA  180
            ELRKLPPGGTIN  HTQPALDLDALLGGLRPVLKG DADK+NT+T AVIELLQGQGG LA
Sbjct  121  ELRKLPPGGTINAEHTQPALDLDALLGGLRPVLKGLDADKVNTVTGAVIELLQGQGGALA  180

Query  181  NVLADTGAFSAALGARDQLIGEVITNLNAVLATVDAKSAQFSASVDQLQQLVSGLAKNRD  240
            NVLADT AFS AL  RDQLIG+ ITNLN+VLATVD +SAQFSASVDQLQQL++GLA+N+D
Sbjct  181  NVLADTSAFSTALARRDQLIGDTITNLNSVLATVDQRSAQFSASVDQLQQLITGLAENKD  240

Query  241  PIAGAISPLASTTTDLTELLRNSRRPLQGILENARPLATELDNRKAEVNNDIEQLGEDYL  300
             IAGAI PLASTTTDLTELL+NSRRPLQG+LENARPLATELDNRK EVNND+EQLGEDYL
Sbjct  241  VIAGAIPPLASTTTDLTELLKNSRRPLQGLLENARPLATELDNRKDEVNNDVEQLGEDYL  300

Query  301  RLSALGSYGAFFNIYFCSVTIKINGPAGSDILLPIGGQPDPSKGRCAFAK  350
            RL+ALGSYGAFFNIYFC+VTIKINGPAGSDIL+P+GGQPDPSKGRCAFAK
Sbjct  301  RLAALGSYGAFFNIYFCTVTIKINGPAGSDILIPMGGQPDPSKGRCAFAK  350


>gi|296166532|ref|ZP_06848963.1| virulence factor mce family protein [Mycobacterium parascrofulaceum 
ATCC BAA-614]
 gi|295898144|gb|EFG77719.1| virulence factor mce family protein [Mycobacterium parascrofulaceum 
ATCC BAA-614]
Length=350

 Score =  573 bits (1477),  Expect = 2e-161, Method: Compositional matrix adjust.
 Identities = 290/350 (83%), Positives = 313/350 (90%), Gaps = 0/350 (0%)

Query  1    MAGSGVPSHRSMVIKVSVFAVVMLLVAAGLVVVFGDFRFGPTTVYHATFTDASRLKAGQK  60
            MA   +PSHRSM+IKVS+FA  MLLV+A LVVVFGDFRFGP   YHATFTD SRLK+GQK
Sbjct  1    MAAGSMPSHRSMMIKVSIFAAAMLLVSAALVVVFGDFRFGPENTYHATFTDVSRLKSGQK  60

Query  61   VRIAGVPVGSVKAVKLNPDHSIDVAFAIDRSYTLYSSTRAVIRYENLVGDRFLEITSGPG  120
            VRIAGVPVG+V  VKLNPD++IDV F ID  YTLYSSTRAVIRYENLVGDR+LEITSGPG
Sbjct  61   VRIAGVPVGAVSGVKLNPDNTIDVTFGIDERYTLYSSTRAVIRYENLVGDRYLEITSGPG  120

Query  121  ELRKLPPGGTINVAHTQPALDLDALLGGLRPVLKGFDADKINTITSAVIELLQGQGGPLA  180
            ELRKLPPG TIN  HTQPALDLDALLGGLRPVLKG DADK+NTI+SAVIELLQGQGG L+
Sbjct  121  ELRKLPPGATINSQHTQPALDLDALLGGLRPVLKGLDADKVNTISSAVIELLQGQGGALS  180

Query  181  NVLADTGAFSAALGARDQLIGEVITNLNAVLATVDAKSAQFSASVDQLQQLVSGLAKNRD  240
            NVLAD  AFS+ALG RDQLIG+VI NLN VL TVD +SAQFSASV+QLQQL+SGLAK +D
Sbjct  181  NVLADASAFSSALGQRDQLIGDVINNLNTVLKTVDQRSAQFSASVEQLQQLISGLAKKKD  240

Query  241  PIAGAISPLASTTTDLTELLRNSRRPLQGILENARPLATELDNRKAEVNNDIEQLGEDYL  300
             IAGAI PLASTTTDLTELL+NSRRPLQGILEN RPLATELDNRKAE+NNDIEQLGEDYL
Sbjct  241  DIAGAIPPLASTTTDLTELLKNSRRPLQGILENTRPLATELDNRKAELNNDIEQLGEDYL  300

Query  301  RLSALGSYGAFFNIYFCSVTIKINGPAGSDILLPIGGQPDPSKGRCAFAK  350
            RL+ALGSYG+FFNIYFCSVTIKINGPAG DIL+P GG  DPSKGRCAF K
Sbjct  301  RLAALGSYGSFFNIYFCSVTIKINGPAGGDILIPFGGPVDPSKGRCAFVK  350


>gi|254822748|ref|ZP_05227749.1| virulence factor Mce family protein [Mycobacterium intracellulare 
ATCC 13950]
Length=351

 Score =  573 bits (1477),  Expect = 2e-161, Method: Compositional matrix adjust.
 Identities = 287/347 (83%), Positives = 318/347 (92%), Gaps = 0/347 (0%)

Query  4    SGVPSHRSMVIKVSVFAVVMLLVAAGLVVVFGDFRFGPTTVYHATFTDASRLKAGQKVRI  63
            SG+PSHR M+IKVS+FAV MLLV+AGLVVVFGDFRFGP + YHATFTD SRLKAGQKVRI
Sbjct  5    SGMPSHREMMIKVSIFAVAMLLVSAGLVVVFGDFRFGPESTYHATFTDVSRLKAGQKVRI  64

Query  64   AGVPVGSVKAVKLNPDHSIDVAFAIDRSYTLYSSTRAVIRYENLVGDRFLEITSGPGELR  123
            AGVPVG+V  +KLN D++IDV F +D+ YTLYSSTRAVIRYENLVGDR+LEITSGPGELR
Sbjct  65   AGVPVGAVSDIKLNRDNTIDVKFGVDKRYTLYSSTRAVIRYENLVGDRYLEITSGPGELR  124

Query  124  KLPPGGTINVAHTQPALDLDALLGGLRPVLKGFDADKINTITSAVIELLQGQGGPLANVL  183
            KLP G TIN  HTQPALDLDALLGGLRPVLKG DADK+NTI+SAVI+LLQGQGG L+NVL
Sbjct  125  KLPAGATINSQHTQPALDLDALLGGLRPVLKGLDADKVNTISSAVIQLLQGQGGALSNVL  184

Query  184  ADTGAFSAALGARDQLIGEVITNLNAVLATVDAKSAQFSASVDQLQQLVSGLAKNRDPIA  243
            ADT AFS+ALG RDQLIG+VI NLN VL TVD +SAQFS SVDQLQQL++GLA+++D IA
Sbjct  185  ADTSAFSSALGQRDQLIGDVINNLNTVLTTVDQRSAQFSTSVDQLQQLITGLAEHKDDIA  244

Query  244  GAISPLASTTTDLTELLRNSRRPLQGILENARPLATELDNRKAEVNNDIEQLGEDYLRLS  303
            GAI PLASTTTDLT+LL+NSRRPLQG+LEN RPLATELDNRKAEVNNDIEQLGEDYLRL+
Sbjct  245  GAIPPLASTTTDLTQLLKNSRRPLQGVLENTRPLATELDNRKAEVNNDIEQLGEDYLRLA  304

Query  304  ALGSYGAFFNIYFCSVTIKINGPAGSDILLPIGGQPDPSKGRCAFAK  350
            ALG+YG+FFNIYFCSVTIKINGPAG DILLP+GGQ DPSKGRCAFAK
Sbjct  305  ALGAYGSFFNIYFCSVTIKINGPAGGDILLPLGGQVDPSKGRCAFAK  351


>gi|240170053|ref|ZP_04748712.1| MCE-family protein Mce4B [Mycobacterium kansasii ATCC 12478]
Length=350

 Score =  563 bits (1452),  Expect = 1e-158, Method: Compositional matrix adjust.
 Identities = 293/350 (84%), Positives = 323/350 (93%), Gaps = 0/350 (0%)

Query  1    MAGSGVPSHRSMVIKVSVFAVVMLLVAAGLVVVFGDFRFGPTTVYHATFTDASRLKAGQK  60
            MA  G+PSHRSMVIKVS+FA+ MLLVAA LVVVFGDFRFGP   YHATFT+ASRLKAGQK
Sbjct  1    MADGGMPSHRSMVIKVSIFALAMLLVAAALVVVFGDFRFGPKATYHATFTNASRLKAGQK  60

Query  61   VRIAGVPVGSVKAVKLNPDHSIDVAFAIDRSYTLYSSTRAVIRYENLVGDRFLEITSGPG  120
            VRIAG+PVG+V  V LNPD+++DV F +D+ YTLYSSTRAV+RYENLVGDR+LEITSGPG
Sbjct  61   VRIAGIPVGAVSGVALNPDNTVDVTFGVDKRYTLYSSTRAVVRYENLVGDRYLEITSGPG  120

Query  121  ELRKLPPGGTINVAHTQPALDLDALLGGLRPVLKGFDADKINTITSAVIELLQGQGGPLA  180
            ELRKLPPGGTIN  HTQPALDLDALLGGL+PVLKG DADK+NTITSAVIELLQGQGG L+
Sbjct  121  ELRKLPPGGTINAQHTQPALDLDALLGGLKPVLKGLDADKVNTITSAVIELLQGQGGALS  180

Query  181  NVLADTGAFSAALGARDQLIGEVITNLNAVLATVDAKSAQFSASVDQLQQLVSGLAKNRD  240
            +VL +T AFS ALG RDQLIG+ ITNLN VLATVD KSAQFSASVDQLQQL++GLA N+D
Sbjct  181  DVLGETSAFSTALGRRDQLIGDAITNLNTVLATVDQKSAQFSASVDQLQQLITGLANNKD  240

Query  241  PIAGAISPLASTTTDLTELLRNSRRPLQGILENARPLATELDNRKAEVNNDIEQLGEDYL  300
             IAGAI PLASTTTDLT+LLRNSRRPLQGILENARPLATELD+RKAE+NND+EQLGEDYL
Sbjct  241  AIAGAIPPLASTTTDLTDLLRNSRRPLQGILENARPLATELDDRKAEINNDVEQLGEDYL  300

Query  301  RLSALGSYGAFFNIYFCSVTIKINGPAGSDILLPIGGQPDPSKGRCAFAK  350
            RL+ALGSYGAFFNIYFC+VTIKINGPAGSDIL+P+GGQPDPSKGRCAFAK
Sbjct  301  RLAALGSYGAFFNIYFCTVTIKINGPAGSDILIPMGGQPDPSKGRCAFAK  350


>gi|333992269|ref|YP_004524883.1| MCE-family protein Mce4B [Mycobacterium sp. JDM601]
 gi|333488237|gb|AEF37629.1| MCE-family protein Mce4B [Mycobacterium sp. JDM601]
Length=345

 Score =  475 bits (1222),  Expect = 6e-132, Method: Compositional matrix adjust.
 Identities = 225/341 (66%), Positives = 278/341 (82%), Gaps = 0/341 (0%)

Query  10   RSMVIKVSVFAVVMLLVAAGLVVVFGDFRFGPTTVYHATFTDASRLKAGQKVRIAGVPVG  69
            R  +IKV++F   MLLV+AGLVVVFG+FRF     YHA F  ASRLK G+ VRIAG+PVG
Sbjct  4    RGTLIKVAIFTAAMLLVSAGLVVVFGEFRFASNHTYHADFASASRLKGGEDVRIAGIPVG  63

Query  70   SVKAVKLNPDHSIDVAFAIDRSYTLYSSTRAVIRYENLVGDRFLEITSGPGELRKLPPGG  129
            +VK V L PD+++ V F +D+ Y LY STRA+IRYENLVGDR+LEI SG GELRKLPPGG
Sbjct  64   TVKRVALTPDNTVSVTFDVDKRYQLYDSTRALIRYENLVGDRYLEIASGAGELRKLPPGG  123

Query  130  TINVAHTQPALDLDALLGGLRPVLKGFDADKINTITSAVIELLQGQGGPLANVLADTGAF  189
            TI   HTQPALDLDALLGG+RPVLKG D  KIN I++A+IELLQGQGG L  +LA+T +F
Sbjct  124  TIGREHTQPALDLDALLGGMRPVLKGLDGTKINEISNAIIELLQGQGGALTQMLANTSSF  183

Query  190  SAALGARDQLIGEVITNLNAVLATVDAKSAQFSASVDQLQQLVSGLAKNRDPIAGAISPL  249
            +  L +RDQLIG+VI NLN VLATVD KS QF A+VD+LQQL++GLA+ +D IAGAI PL
Sbjct  184  TTTLASRDQLIGDVINNLNTVLATVDDKSEQFDATVDRLQQLITGLAEGKDAIAGAIGPL  243

Query  250  ASTTTDLTELLRNSRRPLQGILENARPLATELDNRKAEVNNDIEQLGEDYLRLSALGSYG  309
            A+  TDLT+ LR +RRPLQG++ENARPLAT L+ RK E+N+ I+ L E+YLRL+ALG+YG
Sbjct  244  ATVETDLTDTLRRTRRPLQGVIENARPLATVLNKRKQELNDVIDPLEENYLRLNALGAYG  303

Query  310  AFFNIYFCSVTIKINGPAGSDILLPIGGQPDPSKGRCAFAK  350
            +FFNI +C+V++K+NGPAGSDI+LP+GGQ D +KGRC+  K
Sbjct  304  SFFNINYCTVSMKLNGPAGSDIILPMGGQTDTTKGRCSPVK  344


>gi|118473663|ref|YP_890125.1| virulence factor Mce family protein [Mycobacterium smegmatis 
str. MC2 155]
 gi|118174950|gb|ABK75846.1| virulence factor Mce family protein [Mycobacterium smegmatis 
str. MC2 155]
Length=344

 Score =  474 bits (1221),  Expect = 7e-132, Method: Compositional matrix adjust.
 Identities = 235/340 (70%), Positives = 287/340 (85%), Gaps = 1/340 (0%)

Query  9    HRS-MVIKVSVFAVVMLLVAAGLVVVFGDFRFGPTTVYHATFTDASRLKAGQKVRIAGVP  67
            HR   ++KV +F +VMLLVAAGLVVVFG+FRF     YHATF++ASRLKAGQ VRIAGVP
Sbjct  2    HRDRTMLKVGIFTMVMLLVAAGLVVVFGEFRFAAGQSYHATFSEASRLKAGQDVRIAGVP  61

Query  68   VGSVKAVKLNPDHSIDVAFAIDRSYTLYSSTRAVIRYENLVGDRFLEITSGPGELRKLPP  127
            VG+VK+VKLNPD+++DV F +++ Y LY+S+RAV+RYENLVGDR+LEITSGPGELRKL P
Sbjct  62   VGTVKSVKLNPDNTVDVGFDVNKRYQLYTSSRAVVRYENLVGDRYLEITSGPGELRKLAP  121

Query  128  GGTINVAHTQPALDLDALLGGLRPVLKGFDADKINTITSAVIELLQGQGGPLANVLADTG  187
            GGT+ + +TQPALDLDALLGGLRPVLKG D  KIN +++AVIE+LQGQGG LAN+L  T 
Sbjct  122  GGTLGLQNTQPALDLDALLGGLRPVLKGLDGAKINEVSNAVIEMLQGQGGALANMLTSTS  181

Query  188  AFSAALGARDQLIGEVITNLNAVLATVDAKSAQFSASVDQLQQLVSGLAKNRDPIAGAIS  247
            AF+  L ARDQLI +VI NLN VL TVD K AQF ASVDQLQQL++GLA+N+DPIAGAI 
Sbjct  182  AFTQNLAARDQLISDVIANLNTVLGTVDEKGAQFDASVDQLQQLITGLAENKDPIAGAIE  241

Query  248  PLASTTTDLTELLRNSRRPLQGILENARPLATELDNRKAEVNNDIEQLGEDYLRLSALGS  307
            PLAS  +DLTE+L  SRRP+QG++EN RP+A  +D RK ++N  IE L E+YLRL+ALG+
Sbjct  242  PLASAESDLTEMLEKSRRPVQGVIENVRPMAGRMDERKDDINKVIEPLAENYLRLNALGA  301

Query  308  YGAFFNIYFCSVTIKINGPAGSDILLPIGGQPDPSKGRCA  347
            YG+FFNI++CSV +K+NGPAGSDIL+P GG PDPSKGRC+
Sbjct  302  YGSFFNIFYCSVRLKVNGPAGSDILIPFGGPPDPSKGRCS  341


>gi|108801579|ref|YP_641776.1| virulence factor MCE-like protein [Mycobacterium sp. MCS]
 gi|119870733|ref|YP_940685.1| virulence factor Mce family protein [Mycobacterium sp. KMS]
 gi|108771998|gb|ABG10720.1| Mammalian cell entry [Mycobacterium sp. MCS]
 gi|119696822|gb|ABL93895.1| virulence factor Mce family protein [Mycobacterium sp. KMS]
Length=344

 Score =  470 bits (1210),  Expect = 1e-130, Method: Compositional matrix adjust.
 Identities = 240/335 (72%), Positives = 280/335 (84%), Gaps = 0/335 (0%)

Query  13   VIKVSVFAVVMLLVAAGLVVVFGDFRFGPTTVYHATFTDASRLKAGQKVRIAGVPVGSVK  72
            ++ V +F V MLLVAA LVVVFG+FRF     YHA FT+ASRLKAGQ VRIAGVPVG+V 
Sbjct  7    LLNVGIFTVAMLLVAAMLVVVFGEFRFASGNSYHANFTEASRLKAGQDVRIAGVPVGTVT  66

Query  73   AVKLNPDHSIDVAFAIDRSYTLYSSTRAVIRYENLVGDRFLEITSGPGELRKLPPGGTIN  132
             +KLN D+++DVAF +   Y LY+STRAV+RYENLVGDR+LEI SGPGELRKLPPG TI 
Sbjct  67   DIKLNDDNTVDVAFDVHNKYQLYTSTRAVVRYENLVGDRYLEIISGPGELRKLPPGSTIP  126

Query  133  VAHTQPALDLDALLGGLRPVLKGFDADKINTITSAVIELLQGQGGPLANVLADTGAFSAA  192
              +TQPALDLDALLGGLRPVLKG D  K+N ++SAVIELLQGQGG LAN+LA TG+FS  
Sbjct  127  KQNTQPALDLDALLGGLRPVLKGLDGAKVNELSSAVIELLQGQGGALANLLATTGSFSQN  186

Query  193  LGARDQLIGEVITNLNAVLATVDAKSAQFSASVDQLQQLVSGLAKNRDPIAGAISPLAST  252
            L ARDQLIG+VITNLN VL TVD K AQF ASVD+LQQL++GLA+ RDPIAGAI PLA+ 
Sbjct  187  LAARDQLIGDVITNLNTVLGTVDEKGAQFDASVDRLQQLITGLAQGRDPIAGAIEPLAAA  246

Query  253  TTDLTELLRNSRRPLQGILENARPLATELDNRKAEVNNDIEQLGEDYLRLSALGSYGAFF  312
              DLTE+L+ SRRPLQG++ENARPLA  LD RKA+VN  IE L E+YLRL+ALG+YG+FF
Sbjct  247  ENDLTEMLKASRRPLQGVIENARPLAQRLDERKADVNKVIEPLAENYLRLNALGAYGSFF  306

Query  313  NIYFCSVTIKINGPAGSDILLPIGGQPDPSKGRCA  347
            NI++CSV IK+NGPAGSDIL+P GG PDPSKGRC+
Sbjct  307  NIFYCSVRIKVNGPAGSDILIPFGGPPDPSKGRCS  341


>gi|145222149|ref|YP_001132827.1| virulence factor Mce family protein [Mycobacterium gilvum PYR-GCK]
 gi|145214635|gb|ABP44039.1| virulence factor Mce family protein [Mycobacterium gilvum PYR-GCK]
Length=343

 Score =  454 bits (1167),  Expect = 1e-125, Method: Compositional matrix adjust.
 Identities = 227/339 (67%), Positives = 278/339 (83%), Gaps = 2/339 (0%)

Query  9    HRSMVIKVSVFAVVMLLVAAGLVVVFGDFRFGPTTVYHATFTDASRLKAGQKVRIAGVPV  68
             R  ++ VS+F VVML+VAA L+VVFG+FRF     Y ATFTDASRLK GQ VRIAG+PV
Sbjct  4    ERRTLVSVSIFTVVMLMVAASLIVVFGEFRFAAEDKYRATFTDASRLKTGQDVRIAGIPV  63

Query  69   GSVKAVKLNPDHSIDVAFAIDRSYTLYSSTRAVIRYENLVGDRFLEITSGPGELRKLPPG  128
            G+V+ + LNPD+S++V F ++  Y LY+ST+AVIRYENLVGDR+LEITSGPG+L KLPPG
Sbjct  64   GTVEGLSLNPDNSVEVEFTVNERYQLYTSTKAVIRYENLVGDRYLEITSGPGDLVKLPPG  123

Query  129  GTINVAHTQPALDLDALLGGLRPVLKGFDADKINTITSAVIELLQGQGGPLANVLADTGA  188
            GT  V +T+PALDLDALLGGL+PV+KG D  K+N I+SAVIELLQG+GG LA +L+ T A
Sbjct  124  GT--VVNTEPALDLDALLGGLKPVVKGLDGAKVNEISSAVIELLQGEGGALAAMLSSTSA  181

Query  189  FSAALGARDQLIGEVITNLNAVLATVDAKSAQFSASVDQLQQLVSGLAKNRDPIAGAISP  248
            F+  L ARDQLIG+VITNLN VL TVD K A+F ASVDQLQ+L++GLA+ RDPIAGAI P
Sbjct  182  FTQNLAARDQLIGDVITNLNTVLGTVDEKGAEFDASVDQLQKLITGLAEGRDPIAGAIGP  241

Query  249  LASTTTDLTELLRNSRRPLQGILENARPLATELDNRKAEVNNDIEQLGEDYLRLSALGSY  308
            LA+   DLTE+L  SRRP+QG++EN RP A  +D RKA+VN  IE L E+YLRL+ALG+Y
Sbjct  242  LATAENDLTEMLETSRRPIQGVIENVRPFAQRMDERKADVNKVIEPLAENYLRLNALGAY  301

Query  309  GAFFNIYFCSVTIKINGPAGSDILLPIGGQPDPSKGRCA  347
            G+FFNI++CS  +KINGPAGSDIL+P GG PDPSKGRC+
Sbjct  302  GSFFNIFYCSTRLKINGPAGSDILVPFGGPPDPSKGRCS  340


>gi|315442588|ref|YP_004075467.1| virulence factor Mce family protein [Mycobacterium sp. Spyr1]
 gi|315260891|gb|ADT97632.1| virulence factor Mce family protein [Mycobacterium sp. Spyr1]
Length=343

 Score =  452 bits (1163),  Expect = 4e-125, Method: Compositional matrix adjust.
 Identities = 226/339 (67%), Positives = 278/339 (83%), Gaps = 2/339 (0%)

Query  9    HRSMVIKVSVFAVVMLLVAAGLVVVFGDFRFGPTTVYHATFTDASRLKAGQKVRIAGVPV  68
             R  ++ VS+F VVML+VAA L+VVFG+FRF     Y ATFTDASRLK GQ VRIAG+PV
Sbjct  4    ERRTLVSVSIFTVVMLMVAASLIVVFGEFRFAAEDKYRATFTDASRLKTGQDVRIAGIPV  63

Query  69   GSVKAVKLNPDHSIDVAFAIDRSYTLYSSTRAVIRYENLVGDRFLEITSGPGELRKLPPG  128
            G+V+ + LNPD+S++V F ++  Y LY+ST+AVIRYENLVGDR+LEITSGPG+L KLPPG
Sbjct  64   GTVEGLSLNPDNSVEVEFTVNERYQLYTSTKAVIRYENLVGDRYLEITSGPGDLVKLPPG  123

Query  129  GTINVAHTQPALDLDALLGGLRPVLKGFDADKINTITSAVIELLQGQGGPLANVLADTGA  188
            GT  V +T+PALDLDALLGGL+PV+KG D  K+N I+SAVIELL+G+GG LA +L+ T A
Sbjct  124  GT--VVNTEPALDLDALLGGLKPVVKGLDGAKVNEISSAVIELLRGEGGALAAMLSSTSA  181

Query  189  FSAALGARDQLIGEVITNLNAVLATVDAKSAQFSASVDQLQQLVSGLAKNRDPIAGAISP  248
            F+  L ARDQLIG+VITNLN VL TVD K A+F ASVDQLQ+L++GLA+ RDPIAGAI P
Sbjct  182  FTQNLAARDQLIGDVITNLNTVLGTVDEKGAEFDASVDQLQKLITGLAEGRDPIAGAIGP  241

Query  249  LASTTTDLTELLRNSRRPLQGILENARPLATELDNRKAEVNNDIEQLGEDYLRLSALGSY  308
            LA+   DLTE+L  SRRP+QG++EN RP A  +D RKA+VN  IE L E+YLRL+ALG+Y
Sbjct  242  LATAENDLTEMLETSRRPIQGVIENVRPFAQRMDERKADVNKVIEPLAENYLRLNALGAY  301

Query  309  GAFFNIYFCSVTIKINGPAGSDILLPIGGQPDPSKGRCA  347
            G+FFNI++CS  +KINGPAGSDIL+P GG PDPSKGRC+
Sbjct  302  GSFFNIFYCSTRLKINGPAGSDILVPFGGPPDPSKGRCS  340


>gi|126437563|ref|YP_001073254.1| virulence factor Mce family protein [Mycobacterium sp. JLS]
 gi|126237363|gb|ABO00764.1| virulence factor Mce family protein [Mycobacterium sp. JLS]
Length=344

 Score =  451 bits (1159),  Expect = 1e-124, Method: Compositional matrix adjust.
 Identities = 242/335 (73%), Positives = 283/335 (85%), Gaps = 0/335 (0%)

Query  13   VIKVSVFAVVMLLVAAGLVVVFGDFRFGPTTVYHATFTDASRLKAGQKVRIAGVPVGSVK  72
            ++ V +F VVMLLVAA LVVVFG+FRF     YHA FT+ASRLKAGQ VRIAGVPVG+VK
Sbjct  7    LLNVGIFTVVMLLVAAALVVVFGEFRFASGNSYHANFTEASRLKAGQDVRIAGVPVGTVK  66

Query  73   AVKLNPDHSIDVAFAIDRSYTLYSSTRAVIRYENLVGDRFLEITSGPGELRKLPPGGTIN  132
             VKLN D+++DVAF +   Y LY+STRAV+RYENLVGDR+LEITSGPGELRKLPPG TI 
Sbjct  67   DVKLNEDNTVDVAFDVSDKYQLYTSTRAVVRYENLVGDRYLEITSGPGELRKLPPGSTIP  126

Query  133  VAHTQPALDLDALLGGLRPVLKGFDADKINTITSAVIELLQGQGGPLANVLADTGAFSAA  192
              +TQPALDLDALLGGLRPVLKG D  K+N ++SAVIELLQGQGG L+N+LA TG+FS  
Sbjct  127  KQNTQPALDLDALLGGLRPVLKGLDGAKVNELSSAVIELLQGQGGALSNLLATTGSFSQN  186

Query  193  LGARDQLIGEVITNLNAVLATVDAKSAQFSASVDQLQQLVSGLAKNRDPIAGAISPLAST  252
            L AR+QLIG+VITNLN VL TVD K AQF ASVD+LQQL++GLA+ RDPIAGAI PLA+ 
Sbjct  187  LAAREQLIGDVITNLNTVLGTVDEKGAQFDASVDRLQQLITGLAQGRDPIAGAIEPLATA  246

Query  253  TTDLTELLRNSRRPLQGILENARPLATELDNRKAEVNNDIEQLGEDYLRLSALGSYGAFF  312
              DLTE+L  SRRPLQG++ENARPLA  LDNRKA+VN  IE L E+YLRL+ALG+YG+FF
Sbjct  247  ENDLTEMLEVSRRPLQGVIENARPLAQALDNRKADVNKVIEPLAENYLRLNALGAYGSFF  306

Query  313  NIYFCSVTIKINGPAGSDILLPIGGQPDPSKGRCA  347
            NI++CS  +KINGPAGSDIL+P+GG PDPSKGRC+
Sbjct  307  NIFYCSTRLKINGPAGSDILIPVGGPPDPSKGRCS  341


>gi|120406149|ref|YP_955978.1| virulence factor Mce family protein [Mycobacterium vanbaalenii 
PYR-1]
 gi|119958967|gb|ABM15972.1| virulence factor Mce family protein [Mycobacterium vanbaalenii 
PYR-1]
Length=341

 Score =  449 bits (1154),  Expect = 4e-124, Method: Compositional matrix adjust.
 Identities = 228/335 (69%), Positives = 276/335 (83%), Gaps = 2/335 (0%)

Query  13   VIKVSVFAVVMLLVAAGLVVVFGDFRFGPTTVYHATFTDASRLKAGQKVRIAGVPVGSVK  72
            +I V VF V MLLVAA LVVVFG+FRF     YHATFTDASRLKAGQ VRIAGVPVG+V+
Sbjct  6    LINVGVFTVAMLLVAAMLVVVFGEFRFASEDKYHATFTDASRLKAGQDVRIAGVPVGTVE  65

Query  73   AVKLNPDHSIDVAFAIDRSYTLYSSTRAVIRYENLVGDRFLEITSGPGELRKLPPGGTIN  132
             + LNPD+++DVAF ++  Y LY+ST+AV+RYENLVGDR+LEITSGPG+L KLP GGTI 
Sbjct  66   GLTLNPDNTVDVAFTVNDRYQLYTSTKAVVRYENLVGDRYLEITSGPGDLVKLPKGGTI-  124

Query  133  VAHTQPALDLDALLGGLRPVLKGFDADKINTITSAVIELLQGQGGPLANVLADTGAFSAA  192
              HT+PALDLDALLGGL+PV+KG D  KIN I++AVIELLQG+GG L+ +L++T AF+  
Sbjct  125  -THTEPALDLDALLGGLKPVVKGLDGAKINEISNAVIELLQGEGGALSAMLSNTSAFTQN  183

Query  193  LGARDQLIGEVITNLNAVLATVDAKSAQFSASVDQLQQLVSGLAKNRDPIAGAISPLAST  252
            L ARDQLIG+VI NLN VL TVD K A+F+ASVDQLQ+L++GLA+ RDPIAGAI PLA+ 
Sbjct  184  LAARDQLIGDVINNLNTVLGTVDEKGAEFNASVDQLQKLITGLAEGRDPIAGAIGPLATA  243

Query  253  TTDLTELLRNSRRPLQGILENARPLATELDNRKAEVNNDIEQLGEDYLRLSALGSYGAFF  312
              DLT +L  SRRP+QG++EN RP A  +D RK +VN  IE L E+YLRL+ALG+YG+FF
Sbjct  244  ENDLTAMLEASRRPVQGVIENVRPFAQRMDERKGDVNKVIEPLAENYLRLNALGAYGSFF  303

Query  313  NIYFCSVTIKINGPAGSDILLPIGGQPDPSKGRCA  347
            NI++CS  +KINGPAGSDIL+P GG PDPSKGRCA
Sbjct  304  NIFYCSTRLKINGPAGSDILVPFGGPPDPSKGRCA  338


>gi|169631230|ref|YP_001704879.1| MCE-family protein [Mycobacterium abscessus ATCC 19977]
 gi|169243197|emb|CAM64225.1| Hypothetical MCE-family protein [Mycobacterium abscessus]
Length=344

 Score =  446 bits (1148),  Expect = 2e-123, Method: Compositional matrix adjust.
 Identities = 223/339 (66%), Positives = 278/339 (83%), Gaps = 0/339 (0%)

Query  10   RSMVIKVSVFAVVMLLVAAGLVVVFGDFRFGPTTVYHATFTDASRLKAGQKVRIAGVPVG  69
            R+  IKV VF VVMLLVAAGL++ FG+FRFG    YHA F+ AS L++GQKVRIAGVPVG
Sbjct  3    RATQIKVIVFTVVMLLVAAGLIITFGEFRFGSGKRYHAMFSTASDLRSGQKVRIAGVPVG  62

Query  70   SVKAVKLNPDHSIDVAFAIDRSYTLYSSTRAVIRYENLVGDRFLEITSGPGELRKLPPGG  129
             VK V LN D+S++V F +D  Y LYSS+RA+IRYENLVGDR+LEIT+GPGEL KLP GG
Sbjct  63   RVKNVSLNRDNSVEVTFDVDSKYQLYSSSRAIIRYENLVGDRYLEITAGPGELHKLPDGG  122

Query  130  TINVAHTQPALDLDALLGGLRPVLKGFDADKINTITSAVIELLQGQGGPLANVLADTGAF  189
            T++  HTQPALDLDALLGGLRPVLKGFDA K+N I++A I++LQGQGG L+ +L DT +F
Sbjct  123  TLDKEHTQPALDLDALLGGLRPVLKGFDAAKVNEISNAFIQILQGQGGTLSQLLGDTSSF  182

Query  190  SAALGARDQLIGEVITNLNAVLATVDAKSAQFSASVDQLQQLVSGLAKNRDPIAGAISPL  249
            ++ L  RDQLIG+VI +LN VLATVD+KS QFS+SVDQLQQL+SGLA+ RD +AGA+ PL
Sbjct  183  TSGLAERDQLIGDVINHLNEVLATVDSKSTQFSSSVDQLQQLISGLAQQRDVVAGALPPL  242

Query  250  ASTTTDLTELLRNSRRPLQGILENARPLATELDNRKAEVNNDIEQLGEDYLRLSALGSYG  309
            AST + L  +L+++R  ++G +E AR LAT +D RKA+VN  +E L E+YLRL+ALG+YG
Sbjct  243  ASTASSLESVLKDTRPYIKGTIEQARQLATRVDERKADVNVVVENLAENYLRLNALGAYG  302

Query  310  AFFNIYFCSVTIKINGPAGSDILLPIGGQPDPSKGRCAF  348
            +FFNIY+CS+ IK+NGP G+D L+P GG PDPSKGRCAF
Sbjct  303  SFFNIYYCSIRIKVNGPVGTDWLIPFGGPPDPSKGRCAF  341


>gi|54022505|ref|YP_116747.1| putative Mce family protein [Nocardia farcinica IFM 10152]
 gi|54014013|dbj|BAD55383.1| putative Mce family protein [Nocardia farcinica IFM 10152]
Length=340

 Score =  310 bits (795),  Expect = 2e-82, Method: Compositional matrix adjust.
 Identities = 162/335 (49%), Positives = 219/335 (66%), Gaps = 2/335 (0%)

Query  14   IKVSVFAVVMLLVAAGLVVVFGDFRFGPTTVYHATFTDASRLKAGQKVRIAGVPVGSVKA  73
            +K+++F +VM L+ AGL VVF   RF     YHA FT +S +  G KVRIAGVPVGSV +
Sbjct  8    VKLAIFTLVMTLIFAGLAVVFSQMRFAREHGYHAVFTSSSGILPGAKVRIAGVPVGSVTS  67

Query  74   VKLNPDHSIDVAFAIDRSYTLYSSTRAVIRYENLVGDRFLEITSGPGELRKLPPGGTINV  133
            V++  D+   V F +DR Y L +STRA I+YENLVGDR+LE+  GPG    L  GGTI  
Sbjct  68   VEVGKDYLAHVEFDVDRKYRLLTSTRAQIKYENLVGDRYLELLDGPGSADVLKAGGTIPK  127

Query  134  AHTQPALDLDALLGGLRPVLKGFDADKINTITSAVIELLQGQGGPLANVLADTGAFSAAL  193
              T PALDLD LLGG +P+L+G D  ++N +T A++++ QGQGG L ++L   G+F+  L
Sbjct  128  ERTAPALDLDMLLGGFKPLLRGLDPGQVNDLTEALLQVFQGQGGTLVSLLDSGGSFAKTL  187

Query  194  GARDQLIGEVITNLNAVLATVDAKSAQFSASVDQLQQLVSGLAKNRDPIAGAISPLASTT  253
            G RD LIG VI NLN VLAT+D +  QF  ++ +LQ+LVSGLA++RDPI  AI  +A  T
Sbjct  188  GERDALIGSVIDNLNTVLATIDERGEQFDTTLTELQRLVSGLAQDRDPIGAAIPRIAGAT  247

Query  254  TDLTELLRNSRRPLQGILENARPLATELDNRKAEVNNDIEQLGEDYLRLSALGSYGAFFN  313
             DLT+LL  +R  L+  +E    LAT L+  +  +   IE+L E Y +L  +GSYG+F  
Sbjct  248  GDLTDLLAQARPDLRNTVEQTGRLATNLNAGEDTMQWVIERLPETYRKLIRIGSYGSFLA  307

Query  314  IYFCSVTIKINGPAGSDILLPIGGQPDPSKGRCAF  348
            +Y C+    I+GP G  +L+ + G  D   GRCAF
Sbjct  308  LYVCATNFIIDGPDGKPLLVNMPGGQD--TGRCAF  340


>gi|111021671|ref|YP_704643.1| MCE family protein [Rhodococcus jostii RHA1]
 gi|110821201|gb|ABG96485.1| MCE family protein [Rhodococcus jostii RHA1]
Length=338

 Score =  310 bits (793),  Expect = 3e-82, Method: Compositional matrix adjust.
 Identities = 163/339 (49%), Positives = 231/339 (69%), Gaps = 4/339 (1%)

Query  10   RSMVIKVSVFAVVMLLVAAGLVVVFGDFRFGPTTVYHATFTDASRLKAGQKVRIAGVPVG  69
            R+  +K+ +FA VM ++ AGL +VF  +RF  +  YHATFTD S LK G KVRIAGVPVG
Sbjct  2    RATTVKLLIFATVMSVIFAGLALVFSQYRFSSSDGYHATFTDVSGLKPGDKVRIAGVPVG  61

Query  70   SVKAVKLNPDHSIDVAFAIDRSYTLYSSTRAVIRYENLVGDRFLEITSGPGELRKLPPGG  129
            +V+ V ++ D+  DV F +D  Y+L+  T+A +RYENLVGDR++E+  G G +  LP GG
Sbjct  62   AVEKVSIDDDNLADVDFTVDTKYSLFDGTKATVRYENLVGDRYMELLEGAGSVEPLPDGG  121

Query  130  TINVAHTQPALDLDALLGGLRPVLKGFDADKINTITSAVIELLQGQGGPLANVLADTGAF  189
            +I V +T PALDLD LLGG +P+L+  D  ++N ++ A++++ QGQGG L ++L  T +F
Sbjct  122  SIPVENTSPALDLDLLLGGFKPLLRALDPQQVNDLSQALVQVFQGQGGTLVSLLGSTSSF  181

Query  190  SAALGARDQLIGEVITNLNAVLATVDAKSAQFSASVDQLQQLVSGLAKNRDPIAGAISPL  249
            +  L  RDQLIGEVITNLN VL T++ +  QF +++DQLQQLVSGL+++RD I  AI  +
Sbjct  182  TNTLADRDQLIGEVITNLNQVLGTINDRGDQFRSTLDQLQQLVSGLSQDRDQIGDAIPRI  241

Query  250  ASTTTDLTELLRNSRRPLQGILENARPLATELDNRKAEVNNDIEQLGEDYLRLSALGSYG  309
            A  T DL  LL  +R PLQ  +  A   AT+L   + +++   + L + Y RL  +G+YG
Sbjct  242  AGATGDLANLLEGARPPLQSTIAEANRTATQLQAGEDDLDWVFQNLPDAYRRLIRIGTYG  301

Query  310  AFFNIYFCSVTIKINGPAGSDILLPI-GGQPDPSKGRCA  347
            +FF +Y C+V  K +GP GSD+LL + GGQ   + GRCA
Sbjct  302  SFFQMYVCTVKFKFSGPDGSDLLLNMPGGQ---TAGRCA  337


>gi|226364208|ref|YP_002781990.1| Mce family protein [Rhodococcus opacus B4]
 gi|226242697|dbj|BAH53045.1| putative Mce family protein [Rhodococcus opacus B4]
Length=340

 Score =  309 bits (792),  Expect = 4e-82, Method: Compositional matrix adjust.
 Identities = 163/339 (49%), Positives = 232/339 (69%), Gaps = 4/339 (1%)

Query  10   RSMVIKVSVFAVVMLLVAAGLVVVFGDFRFGPTTVYHATFTDASRLKAGQKVRIAGVPVG  69
            R+  +K+ +FA VM ++ AGL +VF  +RF  +  YHATFTD S LK G KVRIAGVPVG
Sbjct  4    RATTVKLLIFATVMSVIFAGLALVFSQYRFSSSDGYHATFTDVSGLKPGDKVRIAGVPVG  63

Query  70   SVKAVKLNPDHSIDVAFAIDRSYTLYSSTRAVIRYENLVGDRFLEITSGPGELRKLPPGG  129
            +V+ V ++ D+  DV F +D  Y+L+  T+A +RYENLVGDR++E+  G G ++ LP GG
Sbjct  64   AVEKVSIDDDNLADVDFTVDTKYSLFDGTKATVRYENLVGDRYMELLEGAGSVQPLPDGG  123

Query  130  TINVAHTQPALDLDALLGGLRPVLKGFDADKINTITSAVIELLQGQGGPLANVLADTGAF  189
            +I V +T PALDLD LLGG +P+L+  D  ++N ++ A++++ QGQGG L ++L  T +F
Sbjct  124  SIPVENTSPALDLDLLLGGFKPLLRALDPQQVNDLSQALVQVFQGQGGTLVSLLGSTSSF  183

Query  190  SAALGARDQLIGEVITNLNAVLATVDAKSAQFSASVDQLQQLVSGLAKNRDPIAGAISPL  249
            +  L  RDQLIGEVITNLN VL T++ +  QF +++DQLQQLVSGL+++RD I  AI  +
Sbjct  184  TNTLADRDQLIGEVITNLNQVLGTINDRGDQFRSTLDQLQQLVSGLSQDRDQIGDAIPRI  243

Query  250  ASTTTDLTELLRNSRRPLQGILENARPLATELDNRKAEVNNDIEQLGEDYLRLSALGSYG  309
            A  T DL  LL  +R PLQ  +  A   AT+L   + +++   + L + Y RL  +G+YG
Sbjct  244  AGATGDLAGLLEGARPPLQSTIAEANRTATQLQAGEDDLDWVFQNLPDAYRRLIRIGTYG  303

Query  310  AFFNIYFCSVTIKINGPAGSDILLPI-GGQPDPSKGRCA  347
            +FF +Y C+V  K +GP GSD+LL + GGQ   + GRCA
Sbjct  304  SFFQMYVCTVKFKFSGPDGSDLLLNMPGGQ---TAGRCA  339


>gi|312138211|ref|YP_004005547.1| mce family protein mce2b [Rhodococcus equi 103S]
 gi|325674883|ref|ZP_08154570.1| virulence factor mce family protein [Rhodococcus equi ATCC 33707]
 gi|311887550|emb|CBH46862.1| putative Mce family protein Mce2B [Rhodococcus equi 103S]
 gi|325554469|gb|EGD24144.1| virulence factor mce family protein [Rhodococcus equi ATCC 33707]
Length=339

 Score =  308 bits (790),  Expect = 7e-82, Method: Compositional matrix adjust.
 Identities = 163/338 (49%), Positives = 225/338 (67%), Gaps = 3/338 (0%)

Query  10   RSMVIKVSVFAVVMLLVAAGLVVVFGDFRFGPTTVYHATFTDASRLKAGQKVRIAGVPVG  69
            R+  +K+ +FA VM L+ AGL +VF  FRF  +  YHATF DAS LK+G KVRIAGVPVG
Sbjct  2    RATTVKLLIFATVMALIFAGLAIVFSQFRFSSSDGYHATFADASGLKSGDKVRIAGVPVG  61

Query  70   SVKAVKLNPDHSIDVAFAIDRSYTLYSSTRAVIRYENLVGDRFLEITSGPGELRKLPPGG  129
            SVK+V ++ D+  ++ F++D  YTL SST+A +RYENLVGDR+LE+  G G +  L  GG
Sbjct  62   SVKSVDVDDDNHAEIKFSVDSQYTLLSSTKATVRYENLVGDRYLELLEGQGSVEPLRAGG  121

Query  130  TINVAHTQPALDLDALLGGLRPVLKGFDADKINTITSAVIELLQGQGGPLANVLADTGAF  189
             I +  T PALDLD LLGG +P+L+G D  ++N +++A++++ QGQGG L ++L  T +F
Sbjct  122  AIPLEQTAPALDLDLLLGGFKPLLRGLDPKQVNDLSAALLQVFQGQGGTLVSLLGSTSSF  181

Query  190  SAALGARDQLIGEVITNLNAVLATVDAKSAQFSASVDQLQQLVSGLAKNRDPIAGAISPL  249
            +  L  RDQLIGEVITNLN VL T++ K  QFS +VDQLQQLVSGLA++R PI  AI  +
Sbjct  182  TNTLADRDQLIGEVITNLNTVLGTINDKGDQFSTTVDQLQQLVSGLAQDRGPIGEAIPQI  241

Query  250  ASTTTDLTELLRNSRRPLQGILENARPLATELDNRKAEVNNDIEQLGEDYLRLSALGSYG  309
            A  T  L  LL+ +R  +Q ++E     A +L   + +++  + +L  DY +L  +GSYG
Sbjct  242  ADATGSLASLLQGTRPDIQAMIEQTNRTANQLVLGQDDIDKSLSRLPTDYKKLIRVGSYG  301

Query  310  AFFNIYFCSVTIKINGPAGSDILLPIGGQPDPSKGRCA  347
             FF  + C  T K     GS ++LP   Q   + GRCA
Sbjct  302  DFFQFFLCQNTFKFTASDGSTVVLPTAEQ---TTGRCA  336


>gi|229494577|ref|ZP_04388340.1| virulence factor Mce family protein [Rhodococcus erythropolis 
SK121]
 gi|229318939|gb|EEN84797.1| virulence factor Mce family protein [Rhodococcus erythropolis 
SK121]
Length=340

 Score =  306 bits (785),  Expect = 2e-81, Method: Compositional matrix adjust.
 Identities = 160/338 (48%), Positives = 225/338 (67%), Gaps = 3/338 (0%)

Query  10   RSMVIKVSVFAVVMLLVAAGLVVVFGDFRFGPTTVYHATFTDASRLKAGQKVRIAGVPVG  69
            R   +K+ +F VVM ++ AGL +VF   RF  +  +HATF+D S LK+G KVRIAGVPVG
Sbjct  3    RPTTVKLLIFTVVMAVIFAGLAIVFSQVRFSSSNGFHATFSDVSGLKSGDKVRIAGVPVG  62

Query  70   SVKAVKLNPDHSIDVAFAIDRSYTLYSSTRAVIRYENLVGDRFLEITSGPGELRKLPPGG  129
            SV  V +   +  +V F +D  Y+L  ST+A +RYENLVGDR++E+  G G    LP GG
Sbjct  63   SVTGVSIGDSNQAEVEFDVDTKYSLMKSTKATVRYENLVGDRYMELLEGAGSTETLPSGG  122

Query  130  TINVAHTQPALDLDALLGGLRPVLKGFDADKINTITSAVIELLQGQGGPLANVLADTGAF  189
            +I V  T PALDLD LLGG +P+L+  D  ++N ++ A++++LQGQGG L ++L +T +F
Sbjct  123  SIPVDQTSPALDLDLLLGGFKPLLRSLDPQQVNDLSGALLQVLQGQGGTLVSLLGNTSSF  182

Query  190  SAALGARDQLIGEVITNLNAVLATVDAKSAQFSASVDQLQQLVSGLAKNRDPIAGAISPL  249
            ++ L  RDQLIG+VITNLN VL T++ K  QFS ++DQLQQLVSGLAK+  PI  +I+ +
Sbjct  183  TSTLADRDQLIGDVITNLNDVLGTINDKGDQFSTTIDQLQQLVSGLAKDSGPIGNSITEI  242

Query  250  ASTTTDLTELLRNSRRPLQGILENARPLATELDNRKAEVNNDIEQLGEDYLRLSALGSYG  309
            A  T DL  LL+ +R  +Q ++       T+LD  K ++N  +++L  DY +L  +G+YG
Sbjct  243  AGATGDLASLLQATRPDIQTLIGETNRTMTQLDLGKDDINTALDRLPSDYRKLIRVGTYG  302

Query  310  AFFNIYFCSVTIKINGPAGSDILLPIGGQPDPSKGRCA  347
            AFF  Y C+ T K +GP G+ I+LP   Q     GRCA
Sbjct  303  AFFQFYLCANTFKFSGPDGTTIILPTAVQ---DTGRCA  337


>gi|226304450|ref|YP_002764408.1| Mce family protein [Rhodococcus erythropolis PR4]
 gi|226183565|dbj|BAH31669.1| putative Mce family protein [Rhodococcus erythropolis PR4]
Length=339

 Score =  302 bits (774),  Expect = 5e-80, Method: Compositional matrix adjust.
 Identities = 159/338 (48%), Positives = 223/338 (66%), Gaps = 3/338 (0%)

Query  10   RSMVIKVSVFAVVMLLVAAGLVVVFGDFRFGPTTVYHATFTDASRLKAGQKVRIAGVPVG  69
            R   +K+ +F VVM ++ AGL +VF   RF  +  +HATF+D S LK+G KVRIAGVPVG
Sbjct  2    RPTTVKLLIFTVVMAVIFAGLAIVFSQVRFSSSNGFHATFSDVSGLKSGDKVRIAGVPVG  61

Query  70   SVKAVKLNPDHSIDVAFAIDRSYTLYSSTRAVIRYENLVGDRFLEITSGPGELRKLPPGG  129
            SV  V +   +  +V F +D  Y+L  ST+A +RYENLVGDR++E+  G G    L  GG
Sbjct  62   SVTGVSIGDSNQAEVEFDVDTKYSLMKSTKATVRYENLVGDRYMELLEGAGSTETLSSGG  121

Query  130  TINVAHTQPALDLDALLGGLRPVLKGFDADKINTITSAVIELLQGQGGPLANVLADTGAF  189
            +I V  T PALDLD LLGG +P+L+  D  ++N ++ A++++LQGQGG L ++L +T +F
Sbjct  122  SIPVDQTSPALDLDLLLGGFKPLLRSLDPQQVNDLSGALLQVLQGQGGTLVSLLGNTSSF  181

Query  190  SAALGARDQLIGEVITNLNAVLATVDAKSAQFSASVDQLQQLVSGLAKNRDPIAGAISPL  249
            ++ L  RDQLIG+VITNLN VL T++ K  QFS ++DQLQQLVSGLAK+  PI  +I+ +
Sbjct  182  TSTLADRDQLIGDVITNLNDVLGTINDKGDQFSTTIDQLQQLVSGLAKDSGPIGNSITEI  241

Query  250  ASTTTDLTELLRNSRRPLQGILENARPLATELDNRKAEVNNDIEQLGEDYLRLSALGSYG  309
            A  T DL  LL+ +R  +Q ++       T+LD  K ++N  + +L  DY +L  +G+YG
Sbjct  242  AGATGDLASLLQATRPDIQTLIGETNRTMTQLDLGKDDINTALGRLPSDYRKLIRVGTYG  301

Query  310  AFFNIYFCSVTIKINGPAGSDILLPIGGQPDPSKGRCA  347
            AFF  Y C+ T K +GP G+ I+LP   Q     GRCA
Sbjct  302  AFFQFYLCANTFKFSGPDGTTIILPTAVQ---DTGRCA  336


>gi|333918568|ref|YP_004492149.1| MCE family protein [Amycolicicoccus subflavus DQS3-9A1]
 gi|333480789|gb|AEF39349.1| MCE family protein [Amycolicicoccus subflavus DQS3-9A1]
Length=332

 Score =  301 bits (770),  Expect = 1e-79, Method: Compositional matrix adjust.
 Identities = 150/330 (46%), Positives = 216/330 (66%), Gaps = 2/330 (0%)

Query  18   VFAVVMLLVAAGLVVVFGDFRFGPTTVYHATFTDASRLKAGQKVRIAGVPVGSVKAVKLN  77
            +F++ M LV AGL +VF + RF  T  Y ATFT  S L+ G KVRIAGV VG+V+ V++ 
Sbjct  3    IFSLAMGLVFAGLAIVFSEVRFSATEPYSATFTSVSGLRPGDKVRIAGVQVGTVRDVRVE  62

Query  78   PDHSIDVAFAIDRSYTLYSSTRAVIRYENLVGDRFLEITSGPGELRKLPPGGTINVAHTQ  137
             D+   + F ++  Y+L +ST+A +RYENLVGDR+LE+  GPG    L PGG I V+ T 
Sbjct  63   EDNLAHIDFRVESRYSLLTSTKATVRYENLVGDRYLELLEGPGATDTLTPGGAIPVSQTS  122

Query  138  PALDLDALLGGLRPVLKGFDADKINTITSAVIELLQGQGGPLANVLADTGAFSAALGARD  197
            PALDLD LLGG RP+L+  D D++N ++ A++ + QGQG  L ++L  +G+F+  L  +D
Sbjct  123  PALDLDTLLGGFRPLLRALDPDEVNELSYALLNVFQGQGDTLVSLLGRSGSFTQTLADQD  182

Query  198  QLIGEVITNLNAVLATVDAKSAQFSASVDQLQQLVSGLAKNRDPIAGAISPLASTTTDLT  257
            +LIG VI+NL A L  ++ +  QFS ++ QLQ+LVS L+++RDPIAGA+  LA  T +L 
Sbjct  183  ELIGSVISNLTATLEMLEQRDDQFSDTIGQLQRLVSDLSEDRDPIAGAVPRLAQATGNLA  242

Query  258  ELLRNSRRPLQGILENARPLATELDNRKAEVNNDIEQLGEDYLRLSALGSYGAFFNIYFC  317
            EL   +R P+Q +L      AT+LD  + E+   ++ L E Y  L+ +GSYG+F  +Y C
Sbjct  243  ELFEYNRPPIQEVLAETNRTATQLDAGRDEIQWVLDNLPETYRMLTRIGSYGSFLQLYVC  302

Query  318  SVTIKINGPAGSDILLPIGGQPDPSKGRCA  347
            SV  K  GP G++I++ + G      GRCA
Sbjct  303  SVQAKFTGPEGTEIMVQLPGA--QVTGRCA  330


>gi|118466491|ref|YP_881279.1| virulence factor Mce [Mycobacterium avium 104]
 gi|118167778|gb|ABK68675.1| virulence factor Mce family protein [Mycobacterium avium 104]
Length=342

 Score =  286 bits (732),  Expect = 3e-75, Method: Compositional matrix adjust.
 Identities = 144/336 (43%), Positives = 215/336 (64%), Gaps = 3/336 (0%)

Query  11   SMVIKVSVFAVVMLLVAAGLVVVFGDFRFGPTTVYHATFTDASRLKAGQKVRIAGVPVGS  70
            S+  +V++F  V LL    L+ VFG  RF   T Y A FT+ S LK+G  VRIAGV VG 
Sbjct  7    SIAWRVAIFTAVCLLFTFTLIAVFGQLRFEDRTGYQAVFTNISGLKSGNFVRIAGVEVGK  66

Query  71   VKAVKLNPDHSIDVAFAIDRSYTLYSSTRAVIRYENLVGDRFLEITSGPGELRKLPPGGT  130
            V  + L+ D ++ V FA+D+   L   T+AV+RYENL+GDR+L +  GPG  R+LPPG T
Sbjct  67   VGDLSLHRDGTVTVGFAVDKGVRLSEGTKAVVRYENLIGDRYLALEEGPGSPRRLPPGAT  126

Query  131  INVAHTQPALDLDALLGGLRPVLKGFDADKINTITSAVIELLQGQGGPLANVLADTGAFS  190
            I +A T PALDLDAL+GG RP+ +  D D++N ++  ++ + QGQGG LA+VL+ T   +
Sbjct  127  IPLARTSPALDLDALIGGFRPLFRALDPDQVNALSGQLLRIFQGQGGTLASVLSQTSMLT  186

Query  191  AALGARDQLIGEVITNLNAVLATVDAKSAQFSASVDQLQQLVSGLAKNRDPIAGAISPLA  250
            + L  R QLIGE+ITNLN VL T   +  +FS  +D+L QLV GLA+ RD I+  ++ + 
Sbjct  187  STLAGRSQLIGELITNLNTVLRTFATRDHEFSDGLDKLAQLVDGLAQRRDDISTGLAYIN  246

Query  251  STTTDLTELLRNSRRPLQGILENARPLATELDNRKAEVNNDIEQLGEDYLRLSALGSYGA  310
            +    +T+LL  SR+PL+ ++++   ++ ++ + +  V+N +++L + Y  L+  G  G 
Sbjct  247  AAAGSITDLLSQSRQPLKDVVQHTDRMSGQVLSDRDYVDNLLKELPDIYQVLARQGLNGD  306

Query  311  FFNIYFCSVTIKINGPAGSDILLPIGGQPDPSKGRC  346
            +F  YFC V +K+NG  G+ I + + GQP    GRC
Sbjct  307  YFGFYFCEVLLKLNGKGGNPIFVKLLGQP---SGRC  339


>gi|41408213|ref|NP_961049.1| hypothetical protein MAP2115c [Mycobacterium avium subsp. paratuberculosis 
K-10]
 gi|41396568|gb|AAS04432.1| hypothetical protein MAP_2115c [Mycobacterium avium subsp. paratuberculosis 
K-10]
Length=342

 Score =  286 bits (731),  Expect = 5e-75, Method: Compositional matrix adjust.
 Identities = 144/336 (43%), Positives = 214/336 (64%), Gaps = 3/336 (0%)

Query  11   SMVIKVSVFAVVMLLVAAGLVVVFGDFRFGPTTVYHATFTDASRLKAGQKVRIAGVPVGS  70
            S+  +V++F  V LL    L+ VFG  RF   T Y A FT+ S LK+G  VRIAGV VG 
Sbjct  7    SIAWRVAIFTAVCLLFTFTLIAVFGQLRFEDRTGYQAVFTNISGLKSGNFVRIAGVEVGK  66

Query  71   VKAVKLNPDHSIDVAFAIDRSYTLYSSTRAVIRYENLVGDRFLEITSGPGELRKLPPGGT  130
            V  + L+ D ++ V FA+D+   L   T+AV+RYENL+GDR+L +  GPG  R+LPPG T
Sbjct  67   VGDLTLHRDGTVTVGFAVDKGVRLSEGTKAVVRYENLIGDRYLALEEGPGSPRRLPPGAT  126

Query  131  INVAHTQPALDLDALLGGLRPVLKGFDADKINTITSAVIELLQGQGGPLANVLADTGAFS  190
            I +A T PALDLDAL+GG RP+ +  D D++N ++  ++ + QGQGG LA+VL+ T   +
Sbjct  127  IPLARTSPALDLDALIGGFRPLFRALDPDQVNALSGQLLRIFQGQGGTLASVLSQTSMLT  186

Query  191  AALGARDQLIGEVITNLNAVLATVDAKSAQFSASVDQLQQLVSGLAKNRDPIAGAISPLA  250
            + L  R QLIGE+ITNLN VL T   +  +FS  +D+L QLV GLA+ RD I+  ++ + 
Sbjct  187  STLAGRSQLIGELITNLNTVLRTFATRDHEFSDGLDKLAQLVDGLAQRRDDISTGLAYIN  246

Query  251  STTTDLTELLRNSRRPLQGILENARPLATELDNRKAEVNNDIEQLGEDYLRLSALGSYGA  310
            +    +T+LL  SR+PL+ +++    ++ ++ + +  V+N +++L + Y  L+  G  G 
Sbjct  247  AAAGSITDLLSQSRQPLKDVVQQTDRMSGQVLSDRDYVDNLLKELPDIYQVLARQGLNGD  306

Query  311  FFNIYFCSVTIKINGPAGSDILLPIGGQPDPSKGRC  346
            +F  YFC V +K+NG  G+ I + + GQP    GRC
Sbjct  307  YFGFYFCEVLLKLNGKGGNPIFVKLLGQP---SGRC  339


>gi|336461658|gb|EGO40521.1| virulence factor Mce family protein [Mycobacterium avium subsp. 
paratuberculosis S397]
Length=342

 Score =  285 bits (729),  Expect = 7e-75, Method: Compositional matrix adjust.
 Identities = 143/336 (43%), Positives = 214/336 (64%), Gaps = 3/336 (0%)

Query  11   SMVIKVSVFAVVMLLVAAGLVVVFGDFRFGPTTVYHATFTDASRLKAGQKVRIAGVPVGS  70
            S+  +V++F  V LL    L+ VFG  RF   T Y A FT+ S LK+G  VRIAGV VG 
Sbjct  7    SIAWRVAIFTAVCLLFTFTLIAVFGQLRFEDRTGYQAVFTNISGLKSGNFVRIAGVEVGK  66

Query  71   VKAVKLNPDHSIDVAFAIDRSYTLYSSTRAVIRYENLVGDRFLEITSGPGELRKLPPGGT  130
            V  + L+ D ++ V FA+D+   L   T+AV+RYENL+GDR+L +  GPG  R+LPPG T
Sbjct  67   VGDLTLHRDGTVTVGFAVDKGVRLSEGTKAVVRYENLIGDRYLALEEGPGSPRRLPPGAT  126

Query  131  INVAHTQPALDLDALLGGLRPVLKGFDADKINTITSAVIELLQGQGGPLANVLADTGAFS  190
            I +A T PALDLDAL+GG RP+ +  D D++N ++  ++ + QGQGG LA+VL+ T   +
Sbjct  127  IPLARTSPALDLDALIGGFRPLFRALDPDQVNALSGQLLRIFQGQGGTLASVLSQTSMLT  186

Query  191  AALGARDQLIGEVITNLNAVLATVDAKSAQFSASVDQLQQLVSGLAKNRDPIAGAISPLA  250
            + L  R QLIGE+ITNLN VL T   +  +FS  +D+L QLV GLA+ RD I+  ++ + 
Sbjct  187  STLAGRSQLIGELITNLNTVLRTFATRDHEFSDGLDKLAQLVDGLAQRRDDISTGLAYIN  246

Query  251  STTTDLTELLRNSRRPLQGILENARPLATELDNRKAEVNNDIEQLGEDYLRLSALGSYGA  310
            +    +T+LL  SR+PL+ +++    ++ ++ + +  V+N +++L + Y  L+  G  G 
Sbjct  247  AAAGSITDLLSQSRQPLKDVVQQTDRMSGQVLSDRDYVDNLLKELPDIYQVLARQGLNGD  306

Query  311  FFNIYFCSVTIKINGPAGSDILLPIGGQPDPSKGRC  346
            +F  YFC V +K+NG  G+ + + + GQP    GRC
Sbjct  307  YFGFYFCEVLLKLNGKGGNPVFVKLLGQP---SGRC  339


>gi|262203808|ref|YP_003275016.1| virulence factor Mce family protein [Gordonia bronchialis DSM 
43247]
 gi|262087155|gb|ACY23123.1| virulence factor Mce family protein [Gordonia bronchialis DSM 
43247]
Length=353

 Score =  285 bits (728),  Expect = 1e-74, Method: Compositional matrix adjust.
 Identities = 153/346 (45%), Positives = 214/346 (62%), Gaps = 6/346 (1%)

Query  8    SHRSMVIKVSVFAVVMLLVAAGLVVVFGDFRFGPTTVYHATFTDASRLKAGQKVRIAGVP  67
            + R+ +IK+  F VVMLLV A LVVVF  +R G +  Y A FT AS +K+G KV+IAGV 
Sbjct  7    AFRATLIKLGAFTVVMLLVFAALVVVFSRYRSGSSNDYTAVFTSASAMKSGSKVKIAGVE  66

Query  68   VGSVKAVKLNPDHSIDVAFAIDRSYTLYSSTRAVIRYENLVGDRFLEITSGPGELRK-LP  126
            VGSV  V LN D+  +V F +DR Y L  S RA+IRYENL GDR+LE+  G G++   L 
Sbjct  67   VGSVDGVSLNRDNEAEVDFTVDRKYPLPKSVRALIRYENLTGDRYLELERGTGDVSDTLS  126

Query  127  PGGTINVAHTQPALDLDALLGGLRPVLKGFDADKINTITSAVIELLQGQG--GPLANVLA  184
             GG I +A T+PALDLD L+GG +P+ +  +AD+ N +T+++I++ QG G    L  +L+
Sbjct  127  DGGRIPIAQTEPALDLDKLVGGFKPLFRTLNADEANDLTASLIKVFQGDGQTAALTELLS  186

Query  185  DTGAFSAALGARDQLIGEVITNLNAVLATVDAKSAQFSASVDQLQQLVSGLAKNRDPIAG  244
            +T  F+ A+  RDQLIG+VI NLNA L T+D   A   +SV+ LQQLVSGLA+ R  I  
Sbjct  187  NTAQFTNAIADRDQLIGQVIDNLNATLGTIDGDRAGLDSSVNLLQQLVSGLAEQRGTIGS  246

Query  245  AISPLASTTTDLTELLRNSRRPLQGILENARPLATELDNRKAEVNNDIEQLGEDYLRLSA  304
            AI+  +  T  L +LL  +R  L+  +      +  L N +  +   I +L  DYL+LS 
Sbjct  247  AITQTSRVTNGLADLLSTTRSDLKQTISATGTTSQNLLNAEPYIRQLISRLPNDYLKLSN  306

Query  305  LGSYGAFFNIYFCSVTIKINGPAGSDILLP---IGGQPDPSKGRCA  347
            LGSYG +  +YFC + + + GP G  +      + G+   + GRCA
Sbjct  307  LGSYGGWLQLYFCRIRLLLPGPGGQQVFFTSNDVMGKTTRAGGRCA  352


>gi|254774787|ref|ZP_05216303.1| virulence factor Mce family protein [Mycobacterium avium subsp. 
avium ATCC 25291]
Length=331

 Score =  282 bits (721),  Expect = 6e-74, Method: Compositional matrix adjust.
 Identities = 142/331 (43%), Positives = 212/331 (65%), Gaps = 3/331 (0%)

Query  16   VSVFAVVMLLVAAGLVVVFGDFRFGPTTVYHATFTDASRLKAGQKVRIAGVPVGSVKAVK  75
            +++F  V LL    L+ VFG  RF   T Y A FT+ S LK+G  VRIAGV VG V  + 
Sbjct  1    MAIFTAVCLLFTFTLIAVFGQLRFEDRTGYQAVFTNISGLKSGNFVRIAGVEVGKVGDLS  60

Query  76   LNPDHSIDVAFAIDRSYTLYSSTRAVIRYENLVGDRFLEITSGPGELRKLPPGGTINVAH  135
            L+ D ++ V FA+D+   L   T+AV+RYENL+GDR+L +  GPG  R+LPPG TI +A 
Sbjct  61   LHRDGTVTVGFAVDKGVRLSEGTKAVVRYENLIGDRYLALEEGPGSPRRLPPGATIPLAR  120

Query  136  TQPALDLDALLGGLRPVLKGFDADKINTITSAVIELLQGQGGPLANVLADTGAFSAALGA  195
            T PALDLDAL+GG RP+ +  D D++N ++  ++ + QGQGG LA+VL+ T   ++ L  
Sbjct  121  TSPALDLDALIGGFRPLFRALDPDQVNALSGQLLRIFQGQGGTLASVLSQTSMLTSTLAG  180

Query  196  RDQLIGEVITNLNAVLATVDAKSAQFSASVDQLQQLVSGLAKNRDPIAGAISPLASTTTD  255
            R QLIGE+ITNLN VL T   +  +FS  +D+L QLV GLA+ RD I+  ++ + +    
Sbjct  181  RSQLIGELITNLNTVLRTFATRDHEFSDGLDKLAQLVDGLAQRRDDISTGLAYINAAAGS  240

Query  256  LTELLRNSRRPLQGILENARPLATELDNRKAEVNNDIEQLGEDYLRLSALGSYGAFFNIY  315
            +T+LL  SR+PL+ ++++   ++ ++ + +  V+N +++L + Y  L+  G  G +F  Y
Sbjct  241  ITDLLSQSRQPLKDVVQHTDRMSGQVLSDRDYVDNLLKELPDIYQVLARQGLNGDYFGFY  300

Query  316  FCSVTIKINGPAGSDILLPIGGQPDPSKGRC  346
            FC V +K+NG  G+ I + + GQP    GRC
Sbjct  301  FCEVLLKLNGKGGNPIFVKLLGQP---SGRC  328


>gi|226306855|ref|YP_002766815.1| Mce family protein [Rhodococcus erythropolis PR4]
 gi|226185972|dbj|BAH34076.1| putative Mce family protein [Rhodococcus erythropolis PR4]
Length=340

 Score =  271 bits (694),  Expect = 1e-70, Method: Compositional matrix adjust.
 Identities = 140/338 (42%), Positives = 213/338 (64%), Gaps = 3/338 (0%)

Query  10   RSMVIKVSVFAVVMLLVAAGLVVVFGDFRFGPTTVYHATFTDASRLKAGQKVRIAGVPVG  69
            R   +K  +F +VM+LV AGL++VFG  R G    Y A F +AS L+AG KVRIAGVPVG
Sbjct  4    RGYTVKFGIFVLVMILVNAGLILVFGQMRGGDARSYSAEFVNASGLRAGDKVRIAGVPVG  63

Query  70   SVKAVKLNPDHSIDVAFAIDRSYTLYSSTRAVIRYENLVGDRFLEITSGPGELRKLPPGG  129
            SV +V+   +H   V+F++D   T+  STRA +RY++LVG+R+LE+   PG     P G 
Sbjct  64   SVGSVEFGGNHRAHVSFSVDTGDTVTVSTRAAVRYQDLVGNRYLELLDDPGIAEPQPQGE  123

Query  130  TINVAHTQPALDLDALLGGLRPVLKGFDADKINTITSAVIELLQGQGGPLANVLADTGAF  189
            +I V  T PALDLDALLGG +P+ +  D +++N ++ +++E+ QGQ G +A+VLA TG+ 
Sbjct  124  SIPVDRTAPALDLDALLGGFKPLFQALDPEQVNALSMSLLEVFQGQSGTVASVLAHTGSI  183

Query  190  SAALGARDQLIGEVITNLNAVLATVDAKSAQFSASVDQLQQLVSGLAKNRDPIAGAISPL  249
            +  L  RDQLIG VI NL+ VL+ + ++  QFS ++D LQQLVSGLA +R+ I  A+  +
Sbjct  184  TNTLADRDQLIGRVIGNLDGVLSELRSRGGQFSDTLDHLQQLVSGLAADREMIGTAVESV  243

Query  250  ASTTTDLTELLRNSRRPLQGILENARPLATELDNRKAEVNNDIEQLGEDYLRLSALGSYG  309
             + +    +LL   R  + G L         L  +++E++  +  +  +Y +L  +GSYG
Sbjct  244  NTASGTFADLLAGVRPDIAGNLSKLDASLNPLIEQQSELDRILASMPSNYKQLIRVGSYG  303

Query  310  AFFNIYFCSVTIKINGPAGSDILLPIGGQPDPSKGRCA  347
            +FFN Y C + +K++G  G+ + + +    D + GRCA
Sbjct  304  SFFNFYLCGIALKVDGADGTPLTVDL---VDQTTGRCA  338


>gi|229492751|ref|ZP_04386552.1| virulence factor Mce family protein [Rhodococcus erythropolis 
SK121]
 gi|229320410|gb|EEN86230.1| virulence factor Mce family protein [Rhodococcus erythropolis 
SK121]
Length=340

 Score =  270 bits (689),  Expect = 4e-70, Method: Compositional matrix adjust.
 Identities = 140/338 (42%), Positives = 212/338 (63%), Gaps = 3/338 (0%)

Query  10   RSMVIKVSVFAVVMLLVAAGLVVVFGDFRFGPTTVYHATFTDASRLKAGQKVRIAGVPVG  69
            R   +K  +F +VM+LV AGL++VFG  R G    Y A F +AS L+AG KVRIAGVPVG
Sbjct  4    RGYTVKFGIFVLVMILVNAGLILVFGQMRGGDARSYSAEFVNASGLRAGDKVRIAGVPVG  63

Query  70   SVKAVKLNPDHSIDVAFAIDRSYTLYSSTRAVIRYENLVGDRFLEITSGPGELRKLPPGG  129
            SV +V+   +H   V+F++D   T+  STRA +RY++LVG+R+LE+   PG     P G 
Sbjct  64   SVGSVEFGGNHRAHVSFSVDTGDTVTVSTRAAVRYQDLVGNRYLELLDDPGIAEPQPQGE  123

Query  130  TINVAHTQPALDLDALLGGLRPVLKGFDADKINTITSAVIELLQGQGGPLANVLADTGAF  189
            +I V  T PALDLDALLGG +P+ +  D +++N ++ +++E+ QGQ G +A+VLA TG+ 
Sbjct  124  SIPVDRTAPALDLDALLGGFKPLFQALDPEQVNALSMSLLEVFQGQSGTVASVLAHTGSI  183

Query  190  SAALGARDQLIGEVITNLNAVLATVDAKSAQFSASVDQLQQLVSGLAKNRDPIAGAISPL  249
            +  L  RDQLIG VI NL+ VL+ + ++  QFS ++D LQQLVSGLA +R+ I  A+  +
Sbjct  184  TNTLADRDQLIGRVIGNLDGVLSELRSRGGQFSDTLDHLQQLVSGLAADREMIGTAVESV  243

Query  250  ASTTTDLTELLRNSRRPLQGILENARPLATELDNRKAEVNNDIEQLGEDYLRLSALGSYG  309
             + +    +LL   R  + G L         L  +++E++  +  +  +Y +L  +GSYG
Sbjct  244  NTASGTFADLLAGVRPDIAGNLSKLDASLNPLIEQQSELDRILASMPSNYKQLIRVGSYG  303

Query  310  AFFNIYFCSVTIKINGPAGSDILLPIGGQPDPSKGRCA  347
            +FFN Y C + +K+ G  G+ + + +    D + GRCA
Sbjct  304  SFFNFYLCGIALKVVGADGTPLTVDL---VDQTTGRCA  338


>gi|343926108|ref|ZP_08765620.1| putative Mce family protein [Gordonia alkanivorans NBRC 16433]
 gi|343764034|dbj|GAA12546.1| putative Mce family protein [Gordonia alkanivorans NBRC 16433]
Length=352

 Score =  265 bits (676),  Expect = 1e-68, Method: Compositional matrix adjust.
 Identities = 151/343 (45%), Positives = 214/343 (63%), Gaps = 4/343 (1%)

Query  8    SHRSMVIKVSVFAVVMLLVAAGLVVVFGDFRFGPTTVYHATFTDASRLKAGQKVRIAGVP  67
            + R+++IK+  F VVM+LV   LVVVF  +R G +  + A FT AS +K+G KV+IAGV 
Sbjct  7    AFRAILIKLGAFTVVMILVFVALVVVFSRYRSGASNEFSAVFTSASAMKSGSKVKIAGVE  66

Query  68   VGSVKAVKLNPDHSIDVAFAIDRSYTLYSSTRAVIRYENLVGDRFLEITSGPGELRKLPP  127
            VG+V  V LN  +   + F++D  Y L  S RA+IRYENL GDR+LE+  G G+      
Sbjct  67   VGAVGDVGLNRANEAVITFSVDEQYPLPKSVRALIRYENLTGDRYLELQQGAGDTSTFLG  126

Query  128  GGT-INVAHTQPALDLDALLGGLRPVLKGFDADKINTITSAVIELLQGQGGPLANVLADT  186
            GG  I V  T+PALDLD L+GG +P+ +  +AD++N +TS++I + QGQGG L  +L++T
Sbjct  127  GGAQIPVTQTEPALDLDKLVGGFKPLFRTLNADEVNALTSSLIAVFQGQGGALNTLLSNT  186

Query  187  GAFSAALGARDQLIGEVITNLNAVLATVDAKSAQFSASVDQLQQLVSGLAKNRDPIAGAI  246
             +F+ AL  RDQLIG+VI NLN  LAT+D   A    SVD LQQLV+GLA+ +  I  A+
Sbjct  187  ASFTDALADRDQLIGDVIDNLNTTLATLDGDRAGLDTSVDLLQQLVTGLAEQKGTIGNAL  246

Query  247  SPLASTTTDLTELLRNSRRPLQGILENARPLATELDNRKAEVNNDIEQLGEDYLRLSALG  306
            +  +  T  L++LL  +R  LQ ++ N   ++ EL   +  V N + +L EDY  LS LG
Sbjct  247  TQTSRVTNGLSDLLSTTRPTLQSMVTNTGRVSEELLAAEPFVRNLLTRLPEDYKTLSNLG  306

Query  307  SYGAFFNIYFCSVTIKINGPAGSDILLP---IGGQPDPSKGRC  346
            SYGA+  IYFC + + +  P G  I+     + G    + GRC
Sbjct  307  SYGAWLQIYFCRLRLLLPAPGGQTIIYTSNNVMGDTTRAGGRC  349


>gi|226361935|ref|YP_002779713.1| Mce family protein [Rhodococcus opacus B4]
 gi|226240420|dbj|BAH50768.1| putative Mce family protein [Rhodococcus opacus B4]
Length=340

 Score =  261 bits (668),  Expect = 8e-68, Method: Compositional matrix adjust.
 Identities = 133/332 (41%), Positives = 201/332 (61%), Gaps = 3/332 (0%)

Query  15   KVSVFAVVMLLVAAGLVVVFGDFRFGPTTVYHATFTDASRLKAGQKVRIAGVPVGSVKAV  74
            K+++F++VM+L  A +V+VFG FRFG    Y A F D S L+  + VR+AGV VG V +V
Sbjct  9    KLAIFSIVMVLFTAAVVIVFGQFRFGSERQYSAVFDDVSGLRDNEFVRVAGVEVGKVTSV  68

Query  75   KLNPDHSIDVAFAIDRSYTLYSSTRAVIRYENLVGDRFLEITSGPGELRKLPPGGTINVA  134
             +  D +  V F + ++  L  STRA +++ NL+GD +LE+  G G L  L  G TI V 
Sbjct  69   DVREDSTAMVTFTLTKNVPLTESTRAAVKFSNLIGDHYLELVEGSGPLTPLGEGDTIPVE  128

Query  135  HTQPALDLDALLGGLRPVLKGFDADKINTITSAVIELLQGQGGPLANVLADTGAFSAALG  194
             T PALDLDAL+ G RP+ K  D +++N ++ +++++ QGQGG + + L   G  ++ L 
Sbjct  129  RTVPALDLDALINGFRPLFKALDPEQVNALSGSLVDVFQGQGGTIDHFLQQAGQLTSVLA  188

Query  195  ARDQLIGEVITNLNAVLATVDAKSAQFSASVDQLQQLVSGLAKNRDPIAGAISPLASTTT  254
             RDQLIG VI NLN +L TVD ++A+F+  +DQLQQLVS L +  DP+  A+  +   ++
Sbjct  189  DRDQLIGAVIGNLNTLLGTVDRRNAEFNQGIDQLQQLVSRLGEQSDPLGDALVHIDDASS  248

Query  255  DLTELLRNSRRPLQGILENARPLATELDNRKAEVNNDIEQLGEDYLRLSALGSYGAFFNI  314
             +  LL ++R  ++  +  A  L+ ++   +  +N     L   Y +LS LG +G FF  
Sbjct  249  SMAALLESTRPDIKEDITQAGRLSDQVVADQDYINWAFNSLPAAYNKLSRLGLFGDFFTF  308

Query  315  YFCSVTIKINGPAGSDILLPIGGQPDPSKGRC  346
            Y C V +K+NGP G  + +PI GQ     GRC
Sbjct  309  YLCDVQLKVNGPNGDPVYIPIVGQ---RAGRC  337


>gi|319951380|ref|ZP_08025205.1| virulence factor Mce family protein [Dietzia cinnamea P4]
 gi|319434977|gb|EFV90272.1| virulence factor Mce family protein [Dietzia cinnamea P4]
Length=351

 Score =  256 bits (655),  Expect = 3e-66, Method: Compositional matrix adjust.
 Identities = 140/340 (42%), Positives = 209/340 (62%), Gaps = 4/340 (1%)

Query  10   RSMVIKVSVFAVVMLLVAAGLVVVFGDFRFGPTTVYHATFTDASRLKAGQKVRIAGVPVG  69
            R+ ++K+++F  VM LV A LVVVF ++R G    Y+A FTD S L+ G KVRIAGV VG
Sbjct  12   RATLVKLAIFTTVMALVLAALVVVFSEYRSGDYERYNAAFTDVSGLETGDKVRIAGVEVG  71

Query  70   SVKAVKLNPDHSIDVAFAIDRSYTLYSSTRAVIRYENLVGDRFLEITSGPGELRKLPPGG  129
             V  + L   ++ DV F +     ++ ST AV+RYENL GDR+LE+  G G+   L PGG
Sbjct  72   KVDRIDLAEGNTADVRFTVAGDQIVHVSTEAVVRYENLTGDRYLELRRGEGDQSPLEPGG  131

Query  130  TINVAHTQPALDLDALLGGLRPVLKGFDADKINTITSAVIELLQGQGGPLANVLADTGAF  189
            ++ ++ T PALDLDALLGG RP+ +  D  ++N ++ +++++ QG+ G + ++LA T + 
Sbjct  132  SLPISQTSPALDLDALLGGFRPLFRALDPGQVNQLSESIVKVFQGEAGTVQDLLASTSSL  191

Query  190  SAALGARDQLIGEVITNLNAVLATVDAKSAQFSASVDQLQQLVSGLAKNRDPIAGAISPL  249
            +  +  RDQLIG+VITNLNAVL TV          VD LQQLVSGL+ N + I  +++ L
Sbjct  192  TQTIADRDQLIGDVITNLNAVLTTVADNQENVDTIVDDLQQLVSGLSANSNQIGESVTRL  251

Query  250  ASTTTDLTELLRNSRRPLQGILENARPLATELDNRKAEVNNDIEQLGEDYLRLSALGSYG  309
               + ++T LL + R  L+  +     +A  ++  +  V N I +L  D+ ++  LG YG
Sbjct  252  NDASANMTTLLADVRPALREDVAQIDRVAQLINEDEPFVENVINRLPSDFEKMGRLGVYG  311

Query  310  AFFNIYFCSVTIKINGPA-GSDILLPIGGQPDPSKGRCAF  348
            +FF  Y C V ++I  PA G  + LP   Q + + GRC+F
Sbjct  312  SFFQFYLCGVIVQITNPATGKGVYLP---QYEQTTGRCSF  348


>gi|126436741|ref|YP_001072432.1| virulence factor Mce family protein [Mycobacterium sp. JLS]
 gi|126236541|gb|ABN99941.1| virulence factor Mce family protein [Mycobacterium sp. JLS]
Length=342

 Score =  254 bits (649),  Expect = 2e-65, Method: Compositional matrix adjust.
 Identities = 133/335 (40%), Positives = 197/335 (59%), Gaps = 3/335 (0%)

Query  13   VIKVSVFAVVMLLVAAGLVVVFGDFRFGPTTVYHATFTDASRLKAGQKVRIAGVPVGSVK  72
            + ++++F VV L     +  +F   RF     Y A FT+ S L+A Q VRIAGV VG VK
Sbjct  9    IWRLAIFMVVCLFGMFAMFAIFAQLRFQSERTYRAVFTNVSGLEADQFVRIAGVEVGKVK  68

Query  73   AVKLNPDHSIDVAFAIDRSYTLYSSTRAVIRYENLVGDRFLEITSGPGELRKLPPGGTIN  132
            A+ + PD ++ V F+ D +  L   TRAVIRY++L+G R+L +  G G+ +KL PG TI 
Sbjct  69   AISIQPDTTVLVEFSADDTVVLTEGTRAVIRYDDLIGGRYLGLEEGVGDTKKLNPGSTIP  128

Query  133  VAHTQPALDLDALLGGLRPVLKGFDADKINTITSAVIELLQGQGGPLANVLADTGAFSAA  192
            VA T PALDLDAL+GG RP+ +  D D++N ++S +I   QGQG  +++ L+ T A +  
Sbjct  129  VARTSPALDLDALIGGFRPLFRALDPDQVNALSSQLIRAFQGQGATISSFLSQTAALTNT  188

Query  193  LGARDQLIGEVITNLNAVLATVDAKSAQFSASVDQLQQLVSGLAKNRDPIAGAISPLAST  252
            L  RDQLIG+VI NLN VL ++  +S QF+ +V+ L QLV+ LA  +  I+ +++   + 
Sbjct  189  LADRDQLIGQVIGNLNTVLGSLGDQSTQFAKAVESLSQLVATLAGRKQDISNSVAYTNAA  248

Query  253  TTDLTELLRNSRRPLQGILENARPLATELDNRKAEVNNDIEQLGEDYLRLSALGSYGAFF  312
               +++LL  +R PLQ  +      A+ +   K  V+N +  L + Y  L   G YG FF
Sbjct  249  AGSISDLLAQARPPLQKTVHELDRTASTVLADKDYVDNLLNTLPDTYRILGREGLYGDFF  308

Query  313  NIYFCSVTIKINGPAGSDILLPIGGQPDPSKGRCA  347
              Y C   +K+NG  G  + + + GQ     GRCA
Sbjct  309  GFYLCDAILKVNGKGGQPVFIKVAGQ---DTGRCA  340


>gi|240170396|ref|ZP_04749055.1| MCE-family protein [Mycobacterium kansasii ATCC 12478]
Length=340

 Score =  254 bits (648),  Expect = 2e-65, Method: Compositional matrix adjust.
 Identities = 140/336 (42%), Positives = 212/336 (64%), Gaps = 3/336 (0%)

Query  12   MVIKVSVFAVVMLLVAAGLVVVFGDFRFGPTTVYHATFTDASRLKAGQKVRIAGVPVGSV  71
            M+IK  +FAV+M ++   L  +FG +R G T  Y A F + SRLKAGQ VR+AG+ VG+V
Sbjct  1    MIIKFGIFAVIMTVLTVFLFFIFGQYRTGSTNGYSAVFNNVSRLKAGQTVRVAGIRVGTV  60

Query  72   KAVKLNPDHSIDVAFAIDRSYTLYSSTRAVIRYENLVGDRFLEITSGPGELRKLPPGGTI  131
             +V L PD  + V F  DRS  L + TRAV+RY NLVGDR+LE+  GPG  + LP GG I
Sbjct  61   NSVTLLPDKRVRVKFDADRSVVLTTGTRAVVRYLNLVGDRYLELVDGPGSTKVLPAGGEI  120

Query  132  NVAHTQPALDLDALLGGLRPVLKGFDADKINTITSAVIELLQGQGGPLANVLADTGAFSA  191
             +  T PALDLD LLGGL+PV++G +   +N +T++++++ QG+GG L ++L+ T +FS 
Sbjct  121  PLDRTAPALDLDLLLGGLKPVIQGLNPQDVNALTASLVQVFQGEGGTLQSLLSKTSSFSN  180

Query  192  ALGARDQLIGEVITNLNAVLATVDAKSAQFSASVDQLQQLVSGLAKNRDPIAGAISPLAS  251
             L   ++ + ++I NLN V+AT+D    +FS ++D+LQ+LVS  + +R+ I  AI  L  
Sbjct  181  TLADNNETVQQLIDNLNTVVATLDKDGDKFSTALDRLQRLVSAFSDDRNTIGTAIDALDQ  240

Query  252  TTTDLTELLRNSRRPLQGILENARPLATELDNRKAEVNNDIEQLGEDYLRLSALGSYGAF  311
             T  + +LL  +R PL G ++    LA  LD  K +++  + +L  +Y +L  LGSYGA+
Sbjct  241  GTASIADLLTRARPPLAGTVDQLNRLAPLLDQDKDKIDVSLAKLPNNYRKLVRLGSYGAW  300

Query  312  FNIYFCSVTIKINGPAGSDILLPIGGQPDPSKGRCA  347
               Y C ++++++      ++ PI  Q     GRCA
Sbjct  301  IPYYLCELSLRVSDLQYRTVVSPIYRQ---EGGRCA  333


>gi|183982887|ref|YP_001851178.1| MCE-family protein Mce3B [Mycobacterium marinum M]
 gi|183176213|gb|ACC41323.1| MCE-family protein Mce3B [Mycobacterium marinum M]
Length=342

 Score =  253 bits (647),  Expect = 2e-65, Method: Compositional matrix adjust.
 Identities = 135/337 (41%), Positives = 196/337 (59%), Gaps = 3/337 (0%)

Query  10   RSMVIKVSVFAVVMLLVAAGLVVVFGDFRFGPTTVYHATFTDASRLKAGQKVRIAGVPVG  69
            R +VI++ VF  V  L A  LV VFG  RFG    Y+A F++ S L+ G+ VRIAGV VG
Sbjct  6    RGVVIRLGVFLTVCALTAFLLVAVFGQVRFGDGNTYYAEFSNVSNLREGKLVRIAGVEVG  65

Query  70   SVKAVKLNPDHSIDVAFAIDRSYTLYSSTRAVIRYENLVGDRFLEITSGPGELRKLPPGG  129
             V+ + +NPD ++ V F  D S TL   T+AVIRY+NL GDR+L +  G G L  L PG 
Sbjct  66   KVEKISINPDSTVKVGFTADNSVTLTQGTQAVIRYDNLFGDRYLALEEGAGGLTILKPGQ  125

Query  130  TINVAHTQPALDLDALLGGLRPVLKGFDADKINTITSAVIELLQGQGGPLANVLADTGAF  189
            TI +A+T+PALDLDAL+GG RP+ +  D  ++N ++  +++  QGQG  +   L    A 
Sbjct  126  TIPLANTKPALDLDALIGGFRPLFRALDPHQVNALSDQLLQAFQGQGPTIGTFLDQAAAV  185

Query  190  SAALGARDQLIGEVITNLNAVLATVDAKSAQFSASVDQLQQLVSGLAKNRDPIAGAISPL  249
            +  L  RDQLIG+V+TNLN VL ++  +S +   +V  L QL++GL++ R  I+ A++  
Sbjct  186  TNTLADRDQLIGQVVTNLNVVLGSLGGQSDRLDKAVASLSQLIAGLSERRTDISNAVAYT  245

Query  250  ASTTTDLTELLRNSRRPLQGILENARPLATELDNRKAEVNNDIEQLGEDYLRLSALGSYG  309
             +    + +LL  +R PL   L     +AT        ++N +  L + Y  L   G YG
Sbjct  246  NAAAGSVADLLSQARAPLSKALHETDRVATIALADHDYLDNLLNTLPDRYQALVRQGMYG  305

Query  310  AFFNIYFCSVTIKINGPAGSDILLPIGGQPDPSKGRC  346
             FF  Y C V +K+NG  G  + + + GQ   + GRC
Sbjct  306  DFFAFYLCDVVLKVNGKGGQPVYIKVAGQ---ATGRC  339


>gi|118473503|ref|YP_889049.1| virulence factor Mce family protein [Mycobacterium smegmatis 
str. MC2 155]
 gi|118174790|gb|ABK75686.1| virulence factor Mce family protein [Mycobacterium smegmatis 
str. MC2 155]
Length=341

 Score =  253 bits (645),  Expect = 4e-65, Method: Compositional matrix adjust.
 Identities = 139/337 (42%), Positives = 214/337 (64%), Gaps = 3/337 (0%)

Query  11   SMVIKVSVFAVVMLLVAAGLVVVFGDFRFGPTTVYHATFTDASRLKAGQKVRIAGVPVGS  70
            S ++K  VFAVVM ++ A L + F ++R G    Y A F DASRL++G  VR+AGV VG+
Sbjct  6    STLVKFGVFAVVMAVLTAFLFMTFSEYRGGSYAGYSAVFDDASRLESGDSVRVAGVRVGT  65

Query  71   VKAVKLNPDHSIDVAFAIDRSYTLYSSTRAVIRYENLVGDRFLEITSGPGELRKLPPGGT  130
            VK V L PD ++ V F  +R+  L + T+A +RY NLVGDR+LE+   PG  R LP G  
Sbjct  66   VKNVSLQPDRTVLVDFDTERNIALTTGTKAAVRYLNLVGDRYLELIDSPGSTRLLPAGSQ  125

Query  131  INVAHTQPALDLDALLGGLRPVLKGFDADKINTITSAVIELLQGQGGPLANVLADTGAFS  190
            I    T  ALDLD LLGGL+PV++G D   +N +TS++I++ QGQG  L+++++ T +FS
Sbjct  126  IPKERTASALDLDLLLGGLKPVIQGLDPQDVNALTSSLIQIFQGQGDTLSSLMSKTSSFS  185

Query  191  AALGARDQLIGEVITNLNAVLATVDAKSAQFSASVDQLQQLVSGLAKNRDPIAGAISPLA  250
              L   DQ+IG++I NL+ V+ T++    +FSA+VD+L+QL+SGL+++RDPI  A++ L 
Sbjct  186  NTLADNDQVIGQLIENLDTVVDTLNRDGGKFSATVDRLEQLISGLSQDRDPIGTAVTQLD  245

Query  251  STTTDLTELLRNSRRPLQGILENARPLATELDNRKAEVNNDIEQLGEDYLRLSALGSYGA  310
            + T  +  LL  +R PL   ++    +A  LD+ K  ++  +++   +Y +L+ LGSYG+
Sbjct  246  NGTASIATLLTQARPPLDATVDQLNRMAPLLDDHKVVLDRGLQKAPANYRKLARLGSYGS  305

Query  311  FFNIYFCSVTIKINGPAGSDILLPIGGQPDPSKGRCA  347
            +   Y C ++I++    G   + P+  Q     GRCA
Sbjct  306  WIMYYVCGISIRVTDLQGRTAVFPMIKQ---EGGRCA  339


>gi|342857463|ref|ZP_08714119.1| virulence factor Mce [Mycobacterium colombiense CECT 3035]
 gi|342134796|gb|EGT87962.1| virulence factor Mce [Mycobacterium colombiense CECT 3035]
Length=342

 Score =  253 bits (645),  Expect = 5e-65, Method: Compositional matrix adjust.
 Identities = 139/336 (42%), Positives = 208/336 (62%), Gaps = 3/336 (0%)

Query  11   SMVIKVSVFAVVMLLVAAGLVVVFGDFRFGPTTVYHATFTDASRLKAGQKVRIAGVPVGS  70
            S++++V  F  V LL    L+ VFG  RF   T Y A FT+ S LK+G  VRIAGV VG 
Sbjct  7    SIILRVGAFTAVCLLFTFALIAVFGQLRFEDRTGYRAIFTNISGLKSGNFVRIAGVEVGK  66

Query  71   VKAVKLNPDHSIDVAFAIDRSYTLYSSTRAVIRYENLVGDRFLEITSGPGELRKLPPGGT  130
            V  + L+ D ++ V F +D+   L   TRAV+RYENL+GDR+L +   PG  R+LPPG T
Sbjct  67   VGELSLHRDGTVTVDFEVDKGVRLSEGTRAVVRYENLIGDRYLALEESPGPPRRLPPGAT  126

Query  131  INVAHTQPALDLDALLGGLRPVLKGFDADKINTITSAVIELLQGQGGPLANVLADTGAFS  190
            I +A T PALD+DAL+GG RP+ +  D D++N ++  ++ + QGQGG LA+VL+ T   +
Sbjct  127  IPLARTSPALDIDALIGGFRPLFRALDPDQVNALSGQLLRIFQGQGGTLASVLSQTSILT  186

Query  191  AALGARDQLIGEVITNLNAVLATVDAKSAQFSASVDQLQQLVSGLAKNRDPIAGAISPLA  250
            + L  R +LIG++ITNLN VL T   +  +FS  VD+L QLV GLA+ R+ I+  ++ + 
Sbjct  187  STLAGRSELIGQLITNLNTVLHTFATRDHEFSDGVDKLAQLVDGLAQRRNDISTGLAYIN  246

Query  251  STTTDLTELLRNSRRPLQGILENARPLATELDNRKAEVNNDIEQLGEDYLRLSALGSYGA  310
            +    +T+LL  SR+P++ ++     ++ ++ + K  V+  +  L + Y  L+  G  G 
Sbjct  247  AAAGSITDLLAQSRQPIKDVVHETDRVSGQVLSDKEYVDKLLTDLPDIYQVLARQGLNGD  306

Query  311  FFNIYFCSVTIKINGPAGSDILLPIGGQPDPSKGRC  346
            +F  YFC V +K+NG  G+ I + + GQP    GRC
Sbjct  307  YFGFYFCEVLLKLNGKGGNPIFVKLLGQP---SGRC  339


>gi|254773838|ref|ZP_05215354.1| virulence factor Mce family protein [Mycobacterium avium subsp. 
avium ATCC 25291]
Length=340

 Score =  252 bits (644),  Expect = 6e-65, Method: Compositional matrix adjust.
 Identities = 147/337 (44%), Positives = 205/337 (61%), Gaps = 3/337 (0%)

Query  10   RSMVIKVSVFAVVMLLVAAGLVVVFGDFRFGPTTVYHATFTDASRLKAGQKVRIAGVPVG  69
            R+ +IK +VFAVVM ++ A L  +FG +R G T  Y A FTD SRLK GQ VR+AG+ VG
Sbjct  4    RATLIKFAVFAVVMAMLTAFLFFIFGQYRTGATNGYSAVFTDVSRLKPGQSVRVAGIRVG  63

Query  70   SVKAVKLNPDHSIDVAFAIDRSYTLYSSTRAVIRYENLVGDRFLEITSGPGELRKLPPGG  129
            +V +V L PD  + V F  DR+  L   TRA +RY NLVGDR+LE+  GPG  ++LP GG
Sbjct  64   TVNSVSLQPDKKVVVKFDADRNIVLTEGTRAAVRYLNLVGDRYLELVDGPGSPKRLPAGG  123

Query  130  TINVAHTQPALDLDALLGGLRPVLKGFDADKINTITSAVIELLQGQGGPLANVLADTGAF  189
             I V+ T PALDLD LLGGL+PV +G +A  +N +TS ++++ QGQGG L ++     +F
Sbjct  124  QIPVSRTAPALDLDLLLGGLKPVTQGLNARDVNALTSGLLQVFQGQGGTLDSLFTKATSF  183

Query  190  SAALGARDQLIGEVITNLNAVLATVDAKSAQFSASVDQLQQLVSGLAKNRDPIAGAISPL  249
            S AL   DQ + ++I NLN V+ T+     QFS +VD+L++LVSGL+ +R+ I  AI  L
Sbjct  184  SNALADNDQTVQQLIDNLNIVIGTISKDGKQFSGAVDRLERLVSGLSDDRNTIGSAIDAL  243

Query  250  ASTTTDLTELLRNSRRPLQGILENARPLATELDNRKAEVNNDIEQLGEDYLRLSALGSYG  309
               T  L +LL  +R PL G ++    LA  LDN K  ++  I +  ++Y +L  LG+ G
Sbjct  244  DRGTASLADLLAQARPPLTGTIDQLNRLAPILDNDKDRLDAAIGKAPKNYRKLVRLGANG  303

Query  310  AFFNIYFCSVTIKINGPAGSDILLPIGGQPDPSKGRC  346
            A    Y C + ++     G  +  PI        GRC
Sbjct  304  ATIPYYLCMLELRGTDLQGKTVRAPIFRS---DAGRC  337


>gi|41406858|ref|NP_959694.1| hypothetical protein MAP0760 [Mycobacterium avium subsp. paratuberculosis 
K-10]
 gi|118465177|ref|YP_880210.1| virulence factor Mce [Mycobacterium avium 104]
 gi|41395208|gb|AAS03077.1| hypothetical protein MAP_0760 [Mycobacterium avium subsp. paratuberculosis 
K-10]
 gi|118166464|gb|ABK67361.1| virulence factor Mce family protein [Mycobacterium avium 104]
Length=340

 Score =  251 bits (642),  Expect = 9e-65, Method: Compositional matrix adjust.
 Identities = 146/337 (44%), Positives = 205/337 (61%), Gaps = 3/337 (0%)

Query  10   RSMVIKVSVFAVVMLLVAAGLVVVFGDFRFGPTTVYHATFTDASRLKAGQKVRIAGVPVG  69
            R+ +IK ++FAVVM ++ A L  +FG +R G T  Y A FTD SRLK GQ VR+AG+ VG
Sbjct  4    RATLIKFAIFAVVMAMLTAFLFFIFGQYRTGATNGYSAVFTDVSRLKPGQSVRVAGIRVG  63

Query  70   SVKAVKLNPDHSIDVAFAIDRSYTLYSSTRAVIRYENLVGDRFLEITSGPGELRKLPPGG  129
            +V +V L PD  + V F  DR+  L   TRA +RY NLVGDR+LE+  GPG  ++LP GG
Sbjct  64   TVNSVSLQPDKKVVVKFDADRNIVLTEGTRAAVRYLNLVGDRYLELVDGPGSPKRLPAGG  123

Query  130  TINVAHTQPALDLDALLGGLRPVLKGFDADKINTITSAVIELLQGQGGPLANVLADTGAF  189
             I V+ T PALDLD LLGGL+PV +G +A  +N +TS ++++ QGQGG L ++     +F
Sbjct  124  QIPVSRTAPALDLDLLLGGLKPVTQGLNARDVNALTSGLLQVFQGQGGTLDSLFTKATSF  183

Query  190  SAALGARDQLIGEVITNLNAVLATVDAKSAQFSASVDQLQQLVSGLAKNRDPIAGAISPL  249
            S AL   DQ + ++I NLN V+ T+     QFS +VD+L++LVSGL+ +R+ I  AI  L
Sbjct  184  SNALADNDQTVQQLIDNLNIVIGTISKDGKQFSGAVDRLERLVSGLSDDRNTIGSAIDAL  243

Query  250  ASTTTDLTELLRNSRRPLQGILENARPLATELDNRKAEVNNDIEQLGEDYLRLSALGSYG  309
               T  L +LL  +R PL G ++    LA  LDN K  ++  I +  ++Y +L  LG+ G
Sbjct  244  DRGTASLADLLAQARPPLTGTIDQLNRLAPILDNDKDRLDAAIGKAPKNYRKLVRLGANG  303

Query  310  AFFNIYFCSVTIKINGPAGSDILLPIGGQPDPSKGRC  346
            A    Y C + ++     G  +  PI        GRC
Sbjct  304  ATIPYYLCMLELRGTDLQGKTVRAPIFRS---DAGRC  337


>gi|145224740|ref|YP_001135418.1| virulence factor Mce family protein [Mycobacterium gilvum PYR-GCK]
 gi|315445070|ref|YP_004077949.1| virulence factor Mce family protein [Mycobacterium sp. Spyr1]
 gi|145217226|gb|ABP46630.1| virulence factor Mce family protein [Mycobacterium gilvum PYR-GCK]
 gi|315263373|gb|ADU00115.1| virulence factor Mce family protein [Mycobacterium sp. Spyr1]
Length=341

 Score =  251 bits (641),  Expect = 1e-64, Method: Compositional matrix adjust.
 Identities = 142/339 (42%), Positives = 207/339 (62%), Gaps = 3/339 (0%)

Query  9    HRSMVIKVSVFAVVMLLVAAGLVVVFGDFRFGPTTVYHATFTDASRLKAGQKVRIAGVPV  68
             R   +K ++F  VM L+   L  VFG +R G T VY A F D S L+AG+ VR AGV +
Sbjct  4    QRGAGLKFALFVTVMALLTGCLFAVFGQYRSGSTNVYSAVFKDVSNLRAGESVRFAGVRI  63

Query  69   GSVKAVKLNPDHSIDVAFAIDRSYTLYSSTRAVIRYENLVGDRFLEITSGPGELRKLPPG  128
            G+VK + + PD ++ V F  +R   L S TRAV+RY NLVGDRFLE+    G  R LP G
Sbjct  64   GTVKDLSMQPDKTVVVTFDAERGLVLTSGTRAVVRYLNLVGDRFLELVDDEGSTRILPAG  123

Query  129  GTINVAHTQPALDLDALLGGLRPVLKGFDADKINTITSAVIELLQGQGGPLANVLADTGA  188
              I V  T PALDLD LLGGL+PV+KG DA ++N +++A+I+++QGQGG L ++L+ T +
Sbjct  124  ARIPVEQTAPALDLDLLLGGLKPVIKGLDAQEVNNLSAALIQIVQGQGGTLESLLSRTSS  183

Query  189  FSAALGARDQLIGEVITNLNAVLATVDAKSAQFSASVDQLQQLVSGLAKNRDPIAGAISP  248
            FS AL  R ++I  +I NL   L T+  +   FS  + +L +LV+ L+  R PI  AI  
Sbjct  184  FSNALADRTEVIDRLIVNLQTTLGTLADQRDDFSEGLTRLHRLVTELSAERQPIGAAIDS  243

Query  249  LASTTTDLTELLRNSRRPLQGILENARPLATELDNRKAEVNNDIEQLGEDYLRLSALGSY  308
            L++ T  L++LL ++R PL   ++    LA  L+++   +   I +  E+Y +L  +GSY
Sbjct  244  LSAGTASLSDLLTDTRPPLADTVDQLHRLAPNLESKLDRLETAISKAPENYRKLVRIGSY  303

Query  309  GAFFNIYFCSVTIKINGPAGSDILLPIGGQPDPSKGRCA  347
            G+F N Y CS+ +++   AG   + P+  Q +   GRCA
Sbjct  304  GSFVNYYICSLGVRVTDLAGRTAVFPVFRQDN---GRCA  339


>gi|333992112|ref|YP_004524726.1| MCE-family protein [Mycobacterium sp. JDM601]
 gi|333488080|gb|AEF37472.1| MCE-family protein [Mycobacterium sp. JDM601]
Length=342

 Score =  251 bits (641),  Expect = 1e-64, Method: Compositional matrix adjust.
 Identities = 136/335 (41%), Positives = 208/335 (63%), Gaps = 3/335 (0%)

Query  13   VIKVSVFAVVMLLVAAGLVVVFGDFRFGPTTVYHATFTDASRLKAGQKVRIAGVPVGSVK  72
            ++K  V+A VM+L    L  +F + R GPT  Y A F+DASRLKAG  VR+AGV VG+V 
Sbjct  8    LLKFGVYAAVMVLATIFLFAIFAEVRTGPTAGYQAVFSDASRLKAGDSVRVAGVRVGTVG  67

Query  73   AVKLNPDHSIDVAFAIDRSYTLYSSTRAVIRYENLVGDRFLEITSGPGELRKLPPGGTIN  132
             V L PD ++ V F  DR+ +L + T+A +RY NLVGDR+LE+T GPG  R LP G  I 
Sbjct  68   RVALRPDGTVLVKFQADRNISLTTGTQASVRYLNLVGDRYLELTDGPGSTRLLPVGAEIP  127

Query  133  VAHTQPALDLDALLGGLRPVLKGFDADKINTITSAVIELLQGQGGPLANVLADTGAFSAA  192
            +  T PALDLD LL GL+PV++G +   +N++T+++I+++QGQGG + ++++ T +FS +
Sbjct  128  LERTAPALDLDLLLNGLKPVIRGLNPQDVNSLTASLIQIMQGQGGTIDSLMSRTSSFSDS  187

Query  193  LGARDQLIGEVITNLNAVLATVDAKSAQFSASVDQLQQLVSGLAKNRDPIAGAISPLAST  252
            L   +Q+I  +I  L   LAT+     +FS ++D+L +LV+GLA +RDPI  A++ L   
Sbjct  188  LADNNQVIESLIDQLRTTLATLSNGDKRFSGAIDRLNKLVAGLAADRDPIGTAVTALDRG  247

Query  253  TTDLTELLRNSRRPLQGILENARPLATELDNRKAEVNNDIEQLGEDYLRLSALGSYGAFF  312
            T  L +LL N+R PL   +     L T ++   A ++  I++  E+Y +   LG+YG F 
Sbjct  248  TASLADLLGNARDPLTNTITQVDRLTTAINADLAGLDMSIQKAPENYRKAIRLGAYGGFI  307

Query  313  NIYFCSVTIKINGPAGSDILLPIGGQPDPSKGRCA  347
              Y C+V ++++   G   + P        +GRC+
Sbjct  308  QYYICAVQVRVSDTQGRTAVFP---WIKAEEGRCS  339


>gi|145221305|ref|YP_001131983.1| virulence factor Mce family protein [Mycobacterium gilvum PYR-GCK]
 gi|145213791|gb|ABP43195.1| virulence factor Mce family protein [Mycobacterium gilvum PYR-GCK]
Length=343

 Score =  251 bits (641),  Expect = 1e-64, Method: Compositional matrix adjust.
 Identities = 144/338 (43%), Positives = 206/338 (61%), Gaps = 10/338 (2%)

Query  14   IKVSVFAVVMLLVAAGLVVVFGDFRFGPTTVYHATFTDASRLKAGQKVRIAGVPVGSVKA  73
            IK+  FA+V+L+  A ++VVFG  RF  TT Y A F++AS L++GQ VR +GV VG VK 
Sbjct  8    IKLGAFALVLLMFTAIIIVVFGQMRFDRTTGYSAIFSNASGLRSGQFVRASGVEVGKVKG  67

Query  74   VKLNPDHS-IDVAFAIDRSYTLYSSTRAVIRYENLVGDRFLEITSGPGELRKLPPGGTIN  132
            V+L  + S + V F +DRS  L+  T A +RY NL+GDR+LE+  G    R L  GGTI 
Sbjct  68   VELIDNGSKVRVDFDVDRSLELFDETTASVRYLNLIGDRYLELARGDSNTR-LAAGGTIP  126

Query  133  VAHTQPALDLDALLGGLRPVLKGFDADKINTITSAVIELLQGQGGPLANVLADTGAFSAA  192
            V  TQPALDLDAL+GG RPV +  D +K+NTI  ++I + QGQGG + ++L  T + ++A
Sbjct  127  VERTQPALDLDALIGGFRPVFQSLDPEKVNTIAQSLITVFQGQGGTINDILDQTASLTSA  186

Query  193  LGARDQLIGEVITNLNAVLATVDAKSAQFSASVDQLQQLVSGLAKNRDPIAGAISPLAST  252
            L  RDQ IGEV+TNLN VL T      +F  +V   + L++GL    DP+A +++ ++  
Sbjct  187  LADRDQAIGEVVTNLNTVLDTTVRHQQEFDDTVKNFEVLITGLKNRADPLAESVADISDA  246

Query  253  TTDLTELLRNSRRPLQGILENARPLATELDNRKAEVNNDIEQLGEDYLRL--SALGSYGA  310
               + +LL ++R  LQ  +     L   L ++K ++N  +EQ+  D L +   + G YG 
Sbjct  247  AGTIGDLLADNRPLLQSTISKLEILNQPLVDQKDQLNQLLEQI-PDALAIIGRSGGIYGD  305

Query  311  FFNIYFCSVTIKING--PAGSDILLPIGGQPDPSKGRC  346
            FFN Y C VT+K+NG  P G    + +  QP    GRC
Sbjct  306  FFNFYACDVTLKLNGLQPGGPVRTVRVWSQP---TGRC  340


>gi|336461220|gb|EGO40096.1| virulence factor Mce family protein [Mycobacterium avium subsp. 
paratuberculosis S397]
Length=340

 Score =  251 bits (640),  Expect = 2e-64, Method: Compositional matrix adjust.
 Identities = 146/337 (44%), Positives = 204/337 (61%), Gaps = 3/337 (0%)

Query  10   RSMVIKVSVFAVVMLLVAAGLVVVFGDFRFGPTTVYHATFTDASRLKAGQKVRIAGVPVG  69
            R+ +IK ++FAVVM ++ A L  +FG +R G T  Y A FTD SRLK GQ VR+AG+ VG
Sbjct  4    RATLIKFAIFAVVMAMLTAFLFFIFGQYRTGATNGYSAVFTDVSRLKPGQSVRVAGIRVG  63

Query  70   SVKAVKLNPDHSIDVAFAIDRSYTLYSSTRAVIRYENLVGDRFLEITSGPGELRKLPPGG  129
            +V +V L PD  + V F  DR+  L   TRA +RY NLVGDR+LE+  GPG  ++LP GG
Sbjct  64   TVNSVSLQPDKKVVVKFDADRNIVLTEGTRAAVRYLNLVGDRYLELVDGPGSPKRLPAGG  123

Query  130  TINVAHTQPALDLDALLGGLRPVLKGFDADKINTITSAVIELLQGQGGPLANVLADTGAF  189
             I V+ T PALDLD LLGGL+PV +G +A  +N +TS ++++ QGQGG L ++     +F
Sbjct  124  QIPVSRTAPALDLDLLLGGLKPVTQGLNARDVNALTSGLLQVFQGQGGTLDSLFTKATSF  183

Query  190  SAALGARDQLIGEVITNLNAVLATVDAKSAQFSASVDQLQQLVSGLAKNRDPIAGAISPL  249
            S AL   DQ + ++I NLN V+ T+     QFS +VD+L++LVSGL+ +R+ I  AI  L
Sbjct  184  SNALADNDQTVQQLIDNLNIVIGTISKDGKQFSGAVDRLERLVSGLSDDRNTIGSAIDAL  243

Query  250  ASTTTDLTELLRNSRRPLQGILENARPLATELDNRKAEVNNDIEQLGEDYLRLSALGSYG  309
               T  L +LL  +R PL G ++    LA  LDN K   +  I +  ++Y +L  LG+ G
Sbjct  244  DRGTASLADLLAQARPPLTGTIDQLNRLAPILDNDKDRFDAAIGKAPKNYRKLVRLGANG  303

Query  310  AFFNIYFCSVTIKINGPAGSDILLPIGGQPDPSKGRC  346
            A    Y C + ++     G  +  PI        GRC
Sbjct  304  ATIPYYLCMLELRGTDLQGKTVRAPIFRS---DAGRC  337


>gi|145222690|ref|YP_001133368.1| virulence factor Mce family protein [Mycobacterium gilvum PYR-GCK]
 gi|145215176|gb|ABP44580.1| virulence factor Mce family protein [Mycobacterium gilvum PYR-GCK]
Length=343

 Score =  250 bits (639),  Expect = 2e-64, Method: Compositional matrix adjust.
 Identities = 140/341 (42%), Positives = 195/341 (58%), Gaps = 4/341 (1%)

Query  8    SHRSMVIKVSVFAVVMLLVAAGLVVVFGDFRFGPTTV-YHATFTDASRLKAGQKVRIAGV  66
            S R    ++  F  V LL   GL  VFG  RFG  T  Y A F + + L+    VRIAGV
Sbjct  4    SIRRDATRLGAFLAVCLLGVFGLFAVFGQMRFGEKTQQYRAEFVNVTGLETNDFVRIAGV  63

Query  67   PVGSVKAVKLNPDHSIDVAFAIDRSYTLYSSTRAVIRYENLVGDRFLEITSGPGELRKLP  126
             VG V+ V++ PD +  V F  D S  L   +RAVIRY++L+G R+L +  G G  +KL 
Sbjct  64   EVGKVENVEIQPDTTAVVEFTADDSVVLTQGSRAVIRYDDLIGGRYLALEEGAGGTQKLN  123

Query  127  PGGTINVAHTQPALDLDALLGGLRPVLKGFDADKINTITSAVIELLQGQGGPLANVLADT  186
            PGGTI +A T PALDLDAL+GG RP+ +  D D+IN ++  +I  LQGQGG + + LA T
Sbjct  124  PGGTIPLARTSPALDLDALIGGFRPLFRALDPDQINALSGQLISALQGQGGTINSFLAQT  183

Query  187  GAFSAALGARDQLIGEVITNLNAVLATVDAKSAQFSASVDQLQQLVSGLAKNRDPIAGAI  246
             A ++ L  RDQLIGEVI NLN VL ++  +S QF+ +VD L QLV GL+  R  I+  +
Sbjct  184  AALTSTLADRDQLIGEVIINLNTVLGSLGDQSDQFAKAVDSLSQLVEGLSDRRQEISDGL  243

Query  247  SPLASTTTDLTELLRNSRRPLQGILENARPLATELDNRKAEVNNDIEQLGEDYLRLSALG  306
            +   +    + + L  +R PL+  ++     A  +       +N I  L + Y  L+  G
Sbjct  244  AYTNAAAGSIADFLTEARPPLKKTIDETDRAAGIVVADHEYFDNLINTLPDAYQVLARQG  303

Query  307  SYGAFFNIYFCSVTIKINGPAGSDILLPIGGQPDPSKGRCA  347
             YG FF+ Y C + +K+NG  G  + + + GQ   S GRCA
Sbjct  304  IYGDFFSFYLCDIVLKLNGKGGQPVYVKVAGQ---SSGRCA  341


>gi|342857627|ref|ZP_08714283.1| virulence factor Mce [Mycobacterium colombiense CECT 3035]
 gi|342134960|gb|EGT88126.1| virulence factor Mce [Mycobacterium colombiense CECT 3035]
Length=342

 Score =  250 bits (639),  Expect = 2e-64, Method: Compositional matrix adjust.
 Identities = 128/335 (39%), Positives = 199/335 (60%), Gaps = 3/335 (0%)

Query  12   MVIKVSVFAVVMLLVAAGLVVVFGDFRFGPTTVYHATFTDASRLKAGQKVRIAGVPVGSV  71
            ++ ++S+F +V +L   G++ VFG  R+    VY+A F + + L+ G  VRIAGV VG V
Sbjct  8    ILWRLSIFMLVCVLGIVGIIAVFGQLRYQHEKVYNAVFANVTGLRGGNFVRIAGVEVGKV  67

Query  72   KAVKLNPDHSIDVAFAIDRSYTLYSSTRAVIRYENLVGDRFLEITSGPGELRKLPPGGTI  131
            K + +N D ++ V F+ D S  L   +RAVIRY +LVGDR+L +  G G +R+L  G TI
Sbjct  68   KKIAVNDDATVTVQFSADDSVVLTQGSRAVIRYADLVGDRYLALEEGTGSVRQLQQGQTI  127

Query  132  NVAHTQPALDLDALLGGLRPVLKGFDADKINTITSAVIELLQGQGGPLANVLADTGAFSA  191
             +  TQPALDL+AL+GG RP+L+  D +++N +T  +I++ Q QG  + + LA T + + 
Sbjct  128  PIERTQPALDLEALIGGFRPLLRALDPEQVNALTGQLIQVFQDQGATIGSFLAQTASVTN  187

Query  192  ALGARDQLIGEVITNLNAVLATVDAKSAQFSASVDQLQQLVSGLAKNRDPIAGAISPLAS  251
             L  RDQLIG+VI NLN +L ++  ++ QF  +V  L QL  GLA +R  I   ++ L +
Sbjct  188  TLADRDQLIGQVIVNLNTLLGSLGDQTNQFDKAVTSLSQLTKGLADHRGDITNGVAYLNA  247

Query  252  TTTDLTELLRNSRRPLQGILENARPLATELDNRKAEVNNDIEQLGEDYLRLSALGSYGAF  311
             +  + +LL  +R PLQ  +      A ++      ++N ++ L E Y  L+  G +G F
Sbjct  248  ASGSVADLLAQARPPLQETVHQTDRTAGQIMADHDYLDNLLDHLPEKYAILARQGLHGDF  307

Query  312  FNIYFCSVTIKINGPAGSDILLPIGGQPDPSKGRC  346
            F+ Y C   +K+NG  G  + + + GQ   S GRC
Sbjct  308  FSFYLCDAILKLNGKGGQPVYVKVAGQ---STGRC  339



Lambda     K      H
   0.318    0.136    0.383 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 648422222280


  Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
    Posted date:  Sep 5, 2011  4:36 AM
  Number of letters in database: 5,219,829,388
  Number of sequences in database:  15,229,318



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40