BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv3500c
Length=280
Score E
Sequences producing significant alignments: (Bits) Value
gi|15610636|ref|NP_218017.1| integral membrane protein YrbE4b [M... 549 2e-154
gi|289449202|ref|ZP_06438946.1| hypothetical membrane protein yr... 548 4e-154
gi|289445097|ref|ZP_06434841.1| hypothetical membrane protein yr... 547 6e-154
gi|240170055|ref|ZP_04748714.1| hypothetical integral membrane p... 512 3e-143
gi|254822746|ref|ZP_05227747.1| ABC-transporter integral membran... 502 2e-140
gi|118463834|ref|YP_879936.1| ABC transporter transmembrane prot... 502 2e-140
gi|342862239|ref|ZP_08718881.1| ABC transporter transmembrane pr... 502 3e-140
gi|41406661|ref|NP_959497.1| hypothetical protein MAP0563 [Mycob... 501 5e-140
gi|126437565|ref|YP_001073256.1| hypothetical protein Mjls_5001 ... 494 8e-138
gi|108801581|ref|YP_641778.1| hypothetical protein Mmcs_4618 [My... 493 2e-137
gi|183984956|ref|YP_001853247.1| membrane protein YrbE4B [Mycoba... 492 3e-137
gi|118619253|ref|YP_907585.1| membrane protein YrbE4B [Mycobacte... 487 8e-136
gi|296166534|ref|ZP_06848965.1| ABC superfamily ATP binding cass... 485 3e-135
gi|118470997|ref|YP_890127.1| TrnB2 protein [Mycobacterium smegm... 481 7e-134
gi|120406151|ref|YP_955980.1| hypothetical protein Mvan_5203 [My... 472 3e-131
gi|145222147|ref|YP_001132825.1| hypothetical protein Mflv_1555 ... 470 1e-130
gi|333992271|ref|YP_004524885.1| hypothetical protein JDM601_363... 463 1e-128
gi|120402601|ref|YP_952430.1| hypothetical protein Mvan_1595 [My... 422 3e-116
gi|169631232|ref|YP_001704881.1| hypothetical protein MAB_4154c ... 414 1e-113
gi|145225117|ref|YP_001135795.1| hypothetical protein Mflv_4539 ... 365 4e-99
gi|226306857|ref|YP_002766817.1| YrbE family protein [Rhodococcu... 360 1e-97
gi|108797254|ref|YP_637451.1| hypothetical protein Mmcs_0274 [My... 358 4e-97
gi|111021669|ref|YP_704641.1| hypothetical protein RHA1_ro04697 ... 357 1e-96
gi|120403834|ref|YP_953663.1| hypothetical protein Mvan_2850 [My... 357 2e-96
gi|226364206|ref|YP_002781988.1| YrbE family protein [Rhodococcu... 356 2e-96
gi|325674885|ref|ZP_08154572.1| ABC superfamily ATP binding cass... 355 3e-96
gi|312138209|ref|YP_004005545.1| integral membrane protein yrbe2... 355 3e-96
gi|226304448|ref|YP_002764406.1| YrbE family protein [Rhodococcu... 355 3e-96
gi|118473565|ref|YP_887174.1| hypothetical protein MSMEG_2854 [M... 353 2e-95
gi|108800638|ref|YP_640835.1| hypothetical protein Mmcs_3672 [My... 352 5e-95
gi|126436262|ref|YP_001071953.1| hypothetical protein Mjls_3685 ... 348 4e-94
gi|54022503|ref|YP_116745.1| putative YrbE family protein [Nocar... 348 5e-94
gi|333992926|ref|YP_004525540.1| hypothetical protein JDM601_428... 345 3e-93
gi|41406856|ref|NP_959692.1| hypothetical protein MAP0758 [Mycob... 343 2e-92
gi|342860431|ref|ZP_08717082.1| TrnB2 protein [Mycobacterium col... 342 3e-92
gi|118466445|ref|YP_880208.1| TrnB2 protein [Mycobacterium avium... 341 6e-92
gi|226361937|ref|YP_002779715.1| YrbE family protein [Rhodococcu... 341 9e-92
gi|254773836|ref|ZP_05215352.1| TrnB2 protein [Mycobacterium avi... 340 2e-91
gi|315443551|ref|YP_004076430.1| ABC transporter involved in res... 339 3e-91
gi|336461222|gb|EGO40098.1| ABC-type transport system involved i... 337 1e-90
gi|118469369|ref|YP_889051.1| ABC transporter transmembrane prot... 337 1e-90
gi|120405105|ref|YP_954934.1| hypothetical protein Mvan_4151 [My... 337 1e-90
gi|145223094|ref|YP_001133772.1| hypothetical protein Mflv_2507 ... 336 2e-90
gi|183984679|ref|YP_001852970.1| hypothetical protein MMAR_4711 ... 335 4e-90
gi|333989351|ref|YP_004521965.1| hypothetical protein JDM601_071... 335 5e-90
gi|296169578|ref|ZP_06851198.1| ABC superfamily ATP binding cass... 335 6e-90
gi|120405065|ref|YP_954894.1| hypothetical protein Mvan_4111 [My... 332 4e-89
gi|343926110|ref|ZP_08765622.1| putative YrbE family protein [Go... 328 8e-88
gi|240170398|ref|ZP_04749057.1| hypothetical protein MkanA1_1389... 328 8e-88
gi|120405557|ref|YP_955386.1| hypothetical protein Mvan_4605 [My... 327 8e-88
>gi|15610636|ref|NP_218017.1| integral membrane protein YrbE4b [Mycobacterium tuberculosis
H37Rv]
gi|15843112|ref|NP_338149.1| hypothetical protein MT3604 [Mycobacterium tuberculosis CDC1551]
gi|31794676|ref|NP_857169.1| integral membrane protein YrbE4b [Mycobacterium bovis AF2122/97]
74 more sequence titles
Length=280
Score = 549 bits (1415), Expect = 2e-154, Method: Compositional matrix adjust.
Identities = 280/280 (100%), Positives = 280/280 (100%), Gaps = 0/280 (0%)
Query 1 MSYDVTIRFRRFFSRLQRPVDNFGEQALFYGETMRYVPNAITRYRKETVRLVAEMTLGAG 60
MSYDVTIRFRRFFSRLQRPVDNFGEQALFYGETMRYVPNAITRYRKETVRLVAEMTLGAG
Sbjct 1 MSYDVTIRFRRFFSRLQRPVDNFGEQALFYGETMRYVPNAITRYRKETVRLVAEMTLGAG 60
Query 61 ALVMIGGTVGVAAFLTLASGGVIAVQGYSSLGDIGIEALTGFLSAFLNVRVVAPVIAGIA 120
ALVMIGGTVGVAAFLTLASGGVIAVQGYSSLGDIGIEALTGFLSAFLNVRVVAPVIAGIA
Sbjct 61 ALVMIGGTVGVAAFLTLASGGVIAVQGYSSLGDIGIEALTGFLSAFLNVRVVAPVIAGIA 120
Query 121 LAATIGAGATAQLGAMRVSEEIDAVECMAVHSVSYLVSTRLIAGLVAIIPLYSLSVLAAF 180
LAATIGAGATAQLGAMRVSEEIDAVECMAVHSVSYLVSTRLIAGLVAIIPLYSLSVLAAF
Sbjct 121 LAATIGAGATAQLGAMRVSEEIDAVECMAVHSVSYLVSTRLIAGLVAIIPLYSLSVLAAF 180
Query 181 FAARFTTVFVNGQSAGLYDHYFNTFLIPSDLLWSFMQAIAMSIAVMLVHTYYGYNASGGS 240
FAARFTTVFVNGQSAGLYDHYFNTFLIPSDLLWSFMQAIAMSIAVMLVHTYYGYNASGGS
Sbjct 181 FAARFTTVFVNGQSAGLYDHYFNTFLIPSDLLWSFMQAIAMSIAVMLVHTYYGYNASGGS 240
Query 241 VGVGVAVGQAVRTSLIVVVVITLFISLAVYGASGNFNLSG 280
VGVGVAVGQAVRTSLIVVVVITLFISLAVYGASGNFNLSG
Sbjct 241 VGVGVAVGQAVRTSLIVVVVITLFISLAVYGASGNFNLSG 280
>gi|289449202|ref|ZP_06438946.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis
CPHL_A]
gi|289422160|gb|EFD19361.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis
CPHL_A]
Length=280
Score = 548 bits (1412), Expect = 4e-154, Method: Compositional matrix adjust.
Identities = 279/280 (99%), Positives = 279/280 (99%), Gaps = 0/280 (0%)
Query 1 MSYDVTIRFRRFFSRLQRPVDNFGEQALFYGETMRYVPNAITRYRKETVRLVAEMTLGAG 60
MSYDVTIRFRRFFSRLQRPVDNFGEQALFYGETMRYVPNAITRYRKETVRLVAEMTLGAG
Sbjct 1 MSYDVTIRFRRFFSRLQRPVDNFGEQALFYGETMRYVPNAITRYRKETVRLVAEMTLGAG 60
Query 61 ALVMIGGTVGVAAFLTLASGGVIAVQGYSSLGDIGIEALTGFLSAFLNVRVVAPVIAGIA 120
ALVMIGGTVGVAAFLTLASGGVIAVQGYSSLGDIGIEALTGFLSAFLNVRVVAPVIAGIA
Sbjct 61 ALVMIGGTVGVAAFLTLASGGVIAVQGYSSLGDIGIEALTGFLSAFLNVRVVAPVIAGIA 120
Query 121 LAATIGAGATAQLGAMRVSEEIDAVECMAVHSVSYLVSTRLIAGLVAIIPLYSLSVLAAF 180
LAATIGAGATAQLGAMRVSEEIDAVECMAVHSVSYLVSTRLIAGLVAIIPLYSLSVLAAF
Sbjct 121 LAATIGAGATAQLGAMRVSEEIDAVECMAVHSVSYLVSTRLIAGLVAIIPLYSLSVLAAF 180
Query 181 FAARFTTVFVNGQSAGLYDHYFNTFLIPSDLLWSFMQAIAMSIAVMLVHTYYGYNASGGS 240
FAARFTTVFVNGQSAGLYDHYFNTFLIPSDLLWSFMQAIAMSIAVMLVHTYYGYNASGGS
Sbjct 181 FAARFTTVFVNGQSAGLYDHYFNTFLIPSDLLWSFMQAIAMSIAVMLVHTYYGYNASGGS 240
Query 241 VGVGVAVGQAVRTSLIVVVVITLFISLAVYGASGNFNLSG 280
VGVGVAVGQAVRTSLIVVVVITLFISL VYGASGNFNLSG
Sbjct 241 VGVGVAVGQAVRTSLIVVVVITLFISLTVYGASGNFNLSG 280
>gi|289445097|ref|ZP_06434841.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis
T46]
gi|289571733|ref|ZP_06451960.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis
T17]
gi|289418016|gb|EFD15256.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis
T46]
gi|289545487|gb|EFD49135.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis
T17]
Length=280
Score = 547 bits (1410), Expect = 6e-154, Method: Compositional matrix adjust.
Identities = 279/280 (99%), Positives = 279/280 (99%), Gaps = 0/280 (0%)
Query 1 MSYDVTIRFRRFFSRLQRPVDNFGEQALFYGETMRYVPNAITRYRKETVRLVAEMTLGAG 60
MSYDVTIRFRRFFSRLQRPVDNFGEQALFYGETMRYVPNAITRYRKETVRLVAEMTLGAG
Sbjct 1 MSYDVTIRFRRFFSRLQRPVDNFGEQALFYGETMRYVPNAITRYRKETVRLVAEMTLGAG 60
Query 61 ALVMIGGTVGVAAFLTLASGGVIAVQGYSSLGDIGIEALTGFLSAFLNVRVVAPVIAGIA 120
ALVMIGGTVGVAAFLTLASGGVIAVQGYSSLGDIGIEAL GFLSAFLNVRVVAPVIAGIA
Sbjct 61 ALVMIGGTVGVAAFLTLASGGVIAVQGYSSLGDIGIEALIGFLSAFLNVRVVAPVIAGIA 120
Query 121 LAATIGAGATAQLGAMRVSEEIDAVECMAVHSVSYLVSTRLIAGLVAIIPLYSLSVLAAF 180
LAATIGAGATAQLGAMRVSEEIDAVECMAVHSVSYLVSTRLIAGLVAIIPLYSLSVLAAF
Sbjct 121 LAATIGAGATAQLGAMRVSEEIDAVECMAVHSVSYLVSTRLIAGLVAIIPLYSLSVLAAF 180
Query 181 FAARFTTVFVNGQSAGLYDHYFNTFLIPSDLLWSFMQAIAMSIAVMLVHTYYGYNASGGS 240
FAARFTTVFVNGQSAGLYDHYFNTFLIPSDLLWSFMQAIAMSIAVMLVHTYYGYNASGGS
Sbjct 181 FAARFTTVFVNGQSAGLYDHYFNTFLIPSDLLWSFMQAIAMSIAVMLVHTYYGYNASGGS 240
Query 241 VGVGVAVGQAVRTSLIVVVVITLFISLAVYGASGNFNLSG 280
VGVGVAVGQAVRTSLIVVVVITLFISLAVYGASGNFNLSG
Sbjct 241 VGVGVAVGQAVRTSLIVVVVITLFISLAVYGASGNFNLSG 280
>gi|240170055|ref|ZP_04748714.1| hypothetical integral membrane protein [Mycobacterium kansasii
ATCC 12478]
Length=280
Score = 512 bits (1318), Expect = 3e-143, Method: Compositional matrix adjust.
Identities = 268/280 (96%), Positives = 276/280 (99%), Gaps = 0/280 (0%)
Query 1 MSYDVTIRFRRFFSRLQRPVDNFGEQALFYGETMRYVPNAITRYRKETVRLVAEMTLGAG 60
MSYDVTIRFRRF SRLQ PVD+FGEQALFYGET+RY+PNAITRYRKET+RLVAEMTLGAG
Sbjct 1 MSYDVTIRFRRFMSRLQEPVDSFGEQALFYGETVRYIPNAITRYRKETIRLVAEMTLGAG 60
Query 61 ALVMIGGTVGVAAFLTLASGGVIAVQGYSSLGDIGIEALTGFLSAFLNVRVVAPVIAGIA 120
ALVMIGGTVGVAAFLTLASGGVIAVQGYSSLG+IGIEALTGFLSAFLNVRVVAPVIAGIA
Sbjct 61 ALVMIGGTVGVAAFLTLASGGVIAVQGYSSLGNIGIEALTGFLSAFLNVRVVAPVIAGIA 120
Query 121 LAATIGAGATAQLGAMRVSEEIDAVECMAVHSVSYLVSTRLIAGLVAIIPLYSLSVLAAF 180
LAATIGAGATAQLGAMRVSEEIDAVECMAVHSVSYLVSTRLIAGLVAIIPLYSLSVLAAF
Sbjct 121 LAATIGAGATAQLGAMRVSEEIDAVECMAVHSVSYLVSTRLIAGLVAIIPLYSLSVLAAF 180
Query 181 FAARFTTVFVNGQSAGLYDHYFNTFLIPSDLLWSFMQAIAMSIAVMLVHTYYGYNASGGS 240
FAARFTTVF+NGQS GLYDHYFNTFLIPSDLLWSF+QAI MSIAVMLVHTYYGYNASGGS
Sbjct 181 FAARFTTVFINGQSKGLYDHYFNTFLIPSDLLWSFLQAIVMSIAVMLVHTYYGYNASGGS 240
Query 241 VGVGVAVGQAVRTSLIVVVVITLFISLAVYGASGNFNLSG 280
VGVG+AVGQAVRTSLIVVVVITLFISLAVYGASGNFNLSG
Sbjct 241 VGVGIAVGQAVRTSLIVVVVITLFISLAVYGASGNFNLSG 280
>gi|254822746|ref|ZP_05227747.1| ABC-transporter integral membrane protein [Mycobacterium intracellulare
ATCC 13950]
Length=280
Score = 502 bits (1293), Expect = 2e-140, Method: Compositional matrix adjust.
Identities = 261/280 (94%), Positives = 273/280 (98%), Gaps = 0/280 (0%)
Query 1 MSYDVTIRFRRFFSRLQRPVDNFGEQALFYGETMRYVPNAITRYRKETVRLVAEMTLGAG 60
MSYD T+RFRR FSRLQ PVD+FGEQALFYG+T+RYVPNA+TRYRKETVRL+AEMT+GAG
Sbjct 1 MSYDATLRFRRLFSRLQEPVDDFGEQALFYGQTVRYVPNALTRYRKETVRLIAEMTMGAG 60
Query 61 ALVMIGGTVGVAAFLTLASGGVIAVQGYSSLGDIGIEALTGFLSAFLNVRVVAPVIAGIA 120
ALVMIGGTVGVAAFLTLASGGVIAVQGYSSLG IGIEALTGFLSAFLNVRVVAPVIAGIA
Sbjct 61 ALVMIGGTVGVAAFLTLASGGVIAVQGYSSLGHIGIEALTGFLSAFLNVRVVAPVIAGIA 120
Query 121 LAATIGAGATAQLGAMRVSEEIDAVECMAVHSVSYLVSTRLIAGLVAIIPLYSLSVLAAF 180
LAATIGAGATAQLGAMRVSEEIDAVECMAVHSVSYLVSTRLIAGL+AIIPLYSLSVLAAF
Sbjct 121 LAATIGAGATAQLGAMRVSEEIDAVECMAVHSVSYLVSTRLIAGLIAIIPLYSLSVLAAF 180
Query 181 FAARFTTVFVNGQSAGLYDHYFNTFLIPSDLLWSFMQAIAMSIAVMLVHTYYGYNASGGS 240
FAARFTTV++NGQS GLYDHYFNTFLIPSDLLWSF+QAI MSIAVMLVHTYYGYNASGG
Sbjct 181 FAARFTTVYINGQSKGLYDHYFNTFLIPSDLLWSFLQAIVMSIAVMLVHTYYGYNASGGP 240
Query 241 VGVGVAVGQAVRTSLIVVVVITLFISLAVYGASGNFNLSG 280
VGVG+AVGQAVRTSLIVVVVITLFISLAVYGASGNFNLSG
Sbjct 241 VGVGIAVGQAVRTSLIVVVVITLFISLAVYGASGNFNLSG 280
>gi|118463834|ref|YP_879936.1| ABC transporter transmembrane protein [Mycobacterium avium 104]
gi|254773612|ref|ZP_05215128.1| ABC-transporter integral membrane protein [Mycobacterium avium
subsp. avium ATCC 25291]
gi|118165121|gb|ABK66018.1| ABC-transporter integral membrane protein [Mycobacterium avium
104]
gi|336458449|gb|EGO37423.1| ABC-type transport system involved in resistance to organic solvents,
permease component [Mycobacterium avium subsp. paratuberculosis
S397]
Length=280
Score = 502 bits (1293), Expect = 2e-140, Method: Compositional matrix adjust.
Identities = 259/280 (93%), Positives = 274/280 (98%), Gaps = 0/280 (0%)
Query 1 MSYDVTIRFRRFFSRLQRPVDNFGEQALFYGETMRYVPNAITRYRKETVRLVAEMTLGAG 60
MSYD T+RFRR+FSRLQ PVD+FGEQALFYG+TMRYVPNA+TRYRKET+RL+AEMT+GAG
Sbjct 1 MSYDATLRFRRWFSRLQEPVDDFGEQALFYGQTMRYVPNALTRYRKETIRLIAEMTMGAG 60
Query 61 ALVMIGGTVGVAAFLTLASGGVIAVQGYSSLGDIGIEALTGFLSAFLNVRVVAPVIAGIA 120
ALVMIGGTVGVAAFLTLASGGVIAVQGYSSLG+IGIEALTGFLSAFLNVRVVAPVIAGIA
Sbjct 61 ALVMIGGTVGVAAFLTLASGGVIAVQGYSSLGNIGIEALTGFLSAFLNVRVVAPVIAGIA 120
Query 121 LAATIGAGATAQLGAMRVSEEIDAVECMAVHSVSYLVSTRLIAGLVAIIPLYSLSVLAAF 180
LAATIGAGATAQLGAMRVSEEIDAVECMAVHSVSYLVSTRLIAGL+AI+PLYSLSVLAAF
Sbjct 121 LAATIGAGATAQLGAMRVSEEIDAVECMAVHSVSYLVSTRLIAGLIAIVPLYSLSVLAAF 180
Query 181 FAARFTTVFVNGQSAGLYDHYFNTFLIPSDLLWSFMQAIAMSIAVMLVHTYYGYNASGGS 240
FAARFTTV++NGQS GLYDHYFNTFLIPSDLLWSF+QAI MSIAVMLVHTYYGYNA GG
Sbjct 181 FAARFTTVYINGQSKGLYDHYFNTFLIPSDLLWSFLQAIVMSIAVMLVHTYYGYNAHGGP 240
Query 241 VGVGVAVGQAVRTSLIVVVVITLFISLAVYGASGNFNLSG 280
VGVG+AVGQAVRTSLIVVVVITLFISLAVYGASGNFNLSG
Sbjct 241 VGVGIAVGQAVRTSLIVVVVITLFISLAVYGASGNFNLSG 280
>gi|342862239|ref|ZP_08718881.1| ABC transporter transmembrane protein [Mycobacterium colombiense
CECT 3035]
gi|342130317|gb|EGT83637.1| ABC transporter transmembrane protein [Mycobacterium colombiense
CECT 3035]
Length=280
Score = 502 bits (1292), Expect = 3e-140, Method: Compositional matrix adjust.
Identities = 260/280 (93%), Positives = 273/280 (98%), Gaps = 0/280 (0%)
Query 1 MSYDVTIRFRRFFSRLQRPVDNFGEQALFYGETMRYVPNAITRYRKETVRLVAEMTLGAG 60
MSYD T+RFRR F+RLQ PVD+FGEQALFYG+TMRYVPNA+TRYRKETVRL+AEMT+GAG
Sbjct 1 MSYDATLRFRRIFTRLQEPVDDFGEQALFYGQTMRYVPNALTRYRKETVRLIAEMTMGAG 60
Query 61 ALVMIGGTVGVAAFLTLASGGVIAVQGYSSLGDIGIEALTGFLSAFLNVRVVAPVIAGIA 120
ALVMIGGTVGVAAFLTLASGGVIAVQGYSSLG+IGIEALTGFLSAFLNVRVVAPVIAGIA
Sbjct 61 ALVMIGGTVGVAAFLTLASGGVIAVQGYSSLGNIGIEALTGFLSAFLNVRVVAPVIAGIA 120
Query 121 LAATIGAGATAQLGAMRVSEEIDAVECMAVHSVSYLVSTRLIAGLVAIIPLYSLSVLAAF 180
LAATIGAGATAQLGAMRVSEEIDAVECMAVHSVSYLVSTRLIAGL+AIIPLYSLSVLAAF
Sbjct 121 LAATIGAGATAQLGAMRVSEEIDAVECMAVHSVSYLVSTRLIAGLIAIIPLYSLSVLAAF 180
Query 181 FAARFTTVFVNGQSAGLYDHYFNTFLIPSDLLWSFMQAIAMSIAVMLVHTYYGYNASGGS 240
FAARFTTV++NGQS GLYDHYFNTFLIPSDLLWSF+QAI MSIAVMLVHTYYGYNA GG
Sbjct 181 FAARFTTVYINGQSKGLYDHYFNTFLIPSDLLWSFLQAIVMSIAVMLVHTYYGYNAHGGP 240
Query 241 VGVGVAVGQAVRTSLIVVVVITLFISLAVYGASGNFNLSG 280
VGVG+AVGQAVRTSLIVVVVITLFISLAVYGASGNFNLSG
Sbjct 241 VGVGIAVGQAVRTSLIVVVVITLFISLAVYGASGNFNLSG 280
>gi|41406661|ref|NP_959497.1| hypothetical protein MAP0563 [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|41395010|gb|AAS02880.1| hypothetical protein MAP_0563 [Mycobacterium avium subsp. paratuberculosis
K-10]
Length=280
Score = 501 bits (1290), Expect = 5e-140, Method: Compositional matrix adjust.
Identities = 258/280 (93%), Positives = 273/280 (98%), Gaps = 0/280 (0%)
Query 1 MSYDVTIRFRRFFSRLQRPVDNFGEQALFYGETMRYVPNAITRYRKETVRLVAEMTLGAG 60
MSYD T+RFRR+FSRLQ PVD+FGEQALFYG+TMRYVPNA+TRYRKET+RL+AEMT+GAG
Sbjct 1 MSYDATLRFRRWFSRLQEPVDDFGEQALFYGQTMRYVPNALTRYRKETIRLIAEMTMGAG 60
Query 61 ALVMIGGTVGVAAFLTLASGGVIAVQGYSSLGDIGIEALTGFLSAFLNVRVVAPVIAGIA 120
ALVMIGGTVGVAAFLTLASGGVIAVQGYSSLG+IGIEALTGFLSAFLNVRVVAPVIAGIA
Sbjct 61 ALVMIGGTVGVAAFLTLASGGVIAVQGYSSLGNIGIEALTGFLSAFLNVRVVAPVIAGIA 120
Query 121 LAATIGAGATAQLGAMRVSEEIDAVECMAVHSVSYLVSTRLIAGLVAIIPLYSLSVLAAF 180
LAATIGAGATAQLGAMRVSEEIDAVECMAVHSVSYLVSTRLIAGL+AI+PLYSLSVLAAF
Sbjct 121 LAATIGAGATAQLGAMRVSEEIDAVECMAVHSVSYLVSTRLIAGLIAIVPLYSLSVLAAF 180
Query 181 FAARFTTVFVNGQSAGLYDHYFNTFLIPSDLLWSFMQAIAMSIAVMLVHTYYGYNASGGS 240
FAARFTTV++NGQS GLYDHYFNTFLIPSDLLWSF+QAI MSIAVMLVHTYYGYNA GG
Sbjct 181 FAARFTTVYINGQSKGLYDHYFNTFLIPSDLLWSFLQAIVMSIAVMLVHTYYGYNAHGGP 240
Query 241 VGVGVAVGQAVRTSLIVVVVITLFISLAVYGASGNFNLSG 280
VGVG+AVGQAVRTSLIVVVVITLFISLAVYG SGNFNLSG
Sbjct 241 VGVGIAVGQAVRTSLIVVVVITLFISLAVYGVSGNFNLSG 280
>gi|126437565|ref|YP_001073256.1| hypothetical protein Mjls_5001 [Mycobacterium sp. JLS]
gi|126237365|gb|ABO00766.1| protein of unknown function DUF140 [Mycobacterium sp. JLS]
Length=280
Score = 494 bits (1271), Expect = 8e-138, Method: Compositional matrix adjust.
Identities = 246/280 (88%), Positives = 265/280 (95%), Gaps = 0/280 (0%)
Query 1 MSYDVTIRFRRFFSRLQRPVDNFGEQALFYGETMRYVPNAITRYRKETVRLVAEMTLGAG 60
MS+D T+R RR F + VD GEQALFYGET+RY+PNA+TRYRKET+RL+AEMT+GAG
Sbjct 1 MSFDATVRLRRVFRWVPGAVDTVGEQALFYGETIRYIPNALTRYRKETIRLIAEMTMGAG 60
Query 61 ALVMIGGTVGVAAFLTLASGGVIAVQGYSSLGDIGIEALTGFLSAFLNVRVVAPVIAGIA 120
ALVMIGGTVGVAAFLTLASGGVIAVQGYSSLG+IGIEALTGFLSAFLNVR+VAPVIAGIA
Sbjct 61 ALVMIGGTVGVAAFLTLASGGVIAVQGYSSLGNIGIEALTGFLSAFLNVRIVAPVIAGIA 120
Query 121 LAATIGAGATAQLGAMRVSEEIDAVECMAVHSVSYLVSTRLIAGLVAIIPLYSLSVLAAF 180
LAATIGAG TAQLGAMRV+EEIDAVE MAVHSVSYLVSTRL+AGL+AI+PLYSLSVLAAF
Sbjct 121 LAATIGAGTTAQLGAMRVAEEIDAVETMAVHSVSYLVSTRLMAGLIAIVPLYSLSVLAAF 180
Query 181 FAARFTTVFVNGQSAGLYDHYFNTFLIPSDLLWSFMQAIAMSIAVMLVHTYYGYNASGGS 240
FAARFTTVF+NGQSAGLYDHYFNTFL+PSDLLWSF+QAI MSIAVMLVHTYYGYNASGG
Sbjct 181 FAARFTTVFINGQSAGLYDHYFNTFLVPSDLLWSFLQAIVMSIAVMLVHTYYGYNASGGP 240
Query 241 VGVGVAVGQAVRTSLIVVVVITLFISLAVYGASGNFNLSG 280
VGVG+AVGQAVRTSLIVVV ITLFISLAVYGASGNFNLSG
Sbjct 241 VGVGIAVGQAVRTSLIVVVTITLFISLAVYGASGNFNLSG 280
>gi|108801581|ref|YP_641778.1| hypothetical protein Mmcs_4618 [Mycobacterium sp. MCS]
gi|119870735|ref|YP_940687.1| hypothetical protein Mkms_4706 [Mycobacterium sp. KMS]
gi|108772000|gb|ABG10722.1| protein of unknown function DUF140 [Mycobacterium sp. MCS]
gi|119696824|gb|ABL93897.1| protein of unknown function DUF140 [Mycobacterium sp. KMS]
Length=280
Score = 493 bits (1268), Expect = 2e-137, Method: Compositional matrix adjust.
Identities = 245/280 (88%), Positives = 265/280 (95%), Gaps = 0/280 (0%)
Query 1 MSYDVTIRFRRFFSRLQRPVDNFGEQALFYGETMRYVPNAITRYRKETVRLVAEMTLGAG 60
MS+D T+R RR F + VD GEQALFYGET+RY+PNA+TRYRKET+RL+AEMT+GAG
Sbjct 1 MSFDATVRLRRAFGWVPGAVDTMGEQALFYGETIRYIPNAVTRYRKETIRLIAEMTMGAG 60
Query 61 ALVMIGGTVGVAAFLTLASGGVIAVQGYSSLGDIGIEALTGFLSAFLNVRVVAPVIAGIA 120
ALVMIGGTVGVAAFLTLASGGVIAVQGYSSLG+IGIEALTGFLSAFLNVR+VAPVIAGIA
Sbjct 61 ALVMIGGTVGVAAFLTLASGGVIAVQGYSSLGNIGIEALTGFLSAFLNVRIVAPVIAGIA 120
Query 121 LAATIGAGATAQLGAMRVSEEIDAVECMAVHSVSYLVSTRLIAGLVAIIPLYSLSVLAAF 180
LAATIGAG TAQLGAMRV+EEIDAVE MAVHSVSYLVSTRL+AGL+AI+PLYSLSVLAAF
Sbjct 121 LAATIGAGTTAQLGAMRVAEEIDAVETMAVHSVSYLVSTRLMAGLIAIVPLYSLSVLAAF 180
Query 181 FAARFTTVFVNGQSAGLYDHYFNTFLIPSDLLWSFMQAIAMSIAVMLVHTYYGYNASGGS 240
FAARFTTV++NGQSAGLYDHYFNTFL+PSDLLWSF+QAI MSIAVMLVHTYYGYNASGG
Sbjct 181 FAARFTTVYINGQSAGLYDHYFNTFLVPSDLLWSFLQAIVMSIAVMLVHTYYGYNASGGP 240
Query 241 VGVGVAVGQAVRTSLIVVVVITLFISLAVYGASGNFNLSG 280
VGVG+AVGQAVRTSLIVVV ITLFISLAVYGASGNFNLSG
Sbjct 241 VGVGIAVGQAVRTSLIVVVTITLFISLAVYGASGNFNLSG 280
>gi|183984956|ref|YP_001853247.1| membrane protein YrbE4B [Mycobacterium marinum M]
gi|183178282|gb|ACC43392.1| conserved hypothetical membrane protein YrbE4B [Mycobacterium
marinum M]
Length=280
Score = 492 bits (1266), Expect = 3e-137, Method: Compositional matrix adjust.
Identities = 268/280 (96%), Positives = 276/280 (99%), Gaps = 0/280 (0%)
Query 1 MSYDVTIRFRRFFSRLQRPVDNFGEQALFYGETMRYVPNAITRYRKETVRLVAEMTLGAG 60
MSYDVTIRF RF SRL RPVDNFGEQALFYGET+RY+PNAITRYRKET+RLVAEMTLGAG
Sbjct 1 MSYDVTIRFHRFMSRLVRPVDNFGEQALFYGETVRYIPNAITRYRKETIRLVAEMTLGAG 60
Query 61 ALVMIGGTVGVAAFLTLASGGVIAVQGYSSLGDIGIEALTGFLSAFLNVRVVAPVIAGIA 120
ALVMIGGTVGVAAFLTLASGGVIAVQGYSSLGDIGIEALTGFLSAFLNVRVVAPVIAGIA
Sbjct 61 ALVMIGGTVGVAAFLTLASGGVIAVQGYSSLGDIGIEALTGFLSAFLNVRVVAPVIAGIA 120
Query 121 LAATIGAGATAQLGAMRVSEEIDAVECMAVHSVSYLVSTRLIAGLVAIIPLYSLSVLAAF 180
LAATIGAGATAQLGAMRVSEEIDAVECMAVHSVSYLVSTRLIAGLVAIIPLYSL+VLAAF
Sbjct 121 LAATIGAGATAQLGAMRVSEEIDAVECMAVHSVSYLVSTRLIAGLVAIIPLYSLAVLAAF 180
Query 181 FAARFTTVFVNGQSAGLYDHYFNTFLIPSDLLWSFMQAIAMSIAVMLVHTYYGYNASGGS 240
FAARFTTVF+NGQSAGLYDHYFNTFLIPSDLLWSF+QAI M+IAVMLVHTYYGYNASGGS
Sbjct 181 FAARFTTVFINGQSAGLYDHYFNTFLIPSDLLWSFLQAIVMAIAVMLVHTYYGYNASGGS 240
Query 241 VGVGVAVGQAVRTSLIVVVVITLFISLAVYGASGNFNLSG 280
VGVG+AVGQAVRTSLIVVVVITLFISLAVYGASGNFNLSG
Sbjct 241 VGVGIAVGQAVRTSLIVVVVITLFISLAVYGASGNFNLSG 280
>gi|118619253|ref|YP_907585.1| membrane protein YrbE4B [Mycobacterium ulcerans Agy99]
gi|118571363|gb|ABL06114.1| conserved hypothetical membrane protein YrbE4B [Mycobacterium
ulcerans Agy99]
Length=280
Score = 487 bits (1254), Expect = 8e-136, Method: Compositional matrix adjust.
Identities = 264/280 (95%), Positives = 274/280 (98%), Gaps = 0/280 (0%)
Query 1 MSYDVTIRFRRFFSRLQRPVDNFGEQALFYGETMRYVPNAITRYRKETVRLVAEMTLGAG 60
MSYD+T+RF RF SRL RPVDN GEQALFYGET+RY+PNA TRYRKET+RLVAEMTLGAG
Sbjct 1 MSYDLTVRFHRFMSRLARPVDNLGEQALFYGETVRYIPNATTRYRKETIRLVAEMTLGAG 60
Query 61 ALVMIGGTVGVAAFLTLASGGVIAVQGYSSLGDIGIEALTGFLSAFLNVRVVAPVIAGIA 120
ALVMIGGTVGVAAFLTLASGGVIAVQGYSSLGDIGIEALTGFLSAFLNVRVVAPVIAGIA
Sbjct 61 ALVMIGGTVGVAAFLTLASGGVIAVQGYSSLGDIGIEALTGFLSAFLNVRVVAPVIAGIA 120
Query 121 LAATIGAGATAQLGAMRVSEEIDAVECMAVHSVSYLVSTRLIAGLVAIIPLYSLSVLAAF 180
LAATIGAGATAQLGAMRVSEEIDAVECMAVHSVSYLVSTRLIAGLVAIIPLYSL+VLAAF
Sbjct 121 LAATIGAGATAQLGAMRVSEEIDAVECMAVHSVSYLVSTRLIAGLVAIIPLYSLAVLAAF 180
Query 181 FAARFTTVFVNGQSAGLYDHYFNTFLIPSDLLWSFMQAIAMSIAVMLVHTYYGYNASGGS 240
FAARFTTVF+NGQSAGLYDHYFNTFLIPSDLLWSF+QAI M+IAVMLVHTYYGYNASGGS
Sbjct 181 FAARFTTVFINGQSAGLYDHYFNTFLIPSDLLWSFLQAIVMAIAVMLVHTYYGYNASGGS 240
Query 241 VGVGVAVGQAVRTSLIVVVVITLFISLAVYGASGNFNLSG 280
VGVG+AVGQAVRTSLIVVVVITLFISLAVYGASGNFNLSG
Sbjct 241 VGVGIAVGQAVRTSLIVVVVITLFISLAVYGASGNFNLSG 280
>gi|296166534|ref|ZP_06848965.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Mycobacterium parascrofulaceum ATCC BAA-614]
gi|295898146|gb|EFG77721.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Mycobacterium parascrofulaceum ATCC BAA-614]
Length=280
Score = 485 bits (1248), Expect = 3e-135, Method: Compositional matrix adjust.
Identities = 253/280 (91%), Positives = 268/280 (96%), Gaps = 0/280 (0%)
Query 1 MSYDVTIRFRRFFSRLQRPVDNFGEQALFYGETMRYVPNAITRYRKETVRLVAEMTLGAG 60
MSYDV R R RLQ PVD+FGEQALFYG+T+R+VP+AIT+YRKET+RL+AEMT+GAG
Sbjct 1 MSYDVNYRLRSLVMRLQEPVDDFGEQALFYGQTVRHVPHAITKYRKETIRLIAEMTMGAG 60
Query 61 ALVMIGGTVGVAAFLTLASGGVIAVQGYSSLGDIGIEALTGFLSAFLNVRVVAPVIAGIA 120
ALVMIGGTVGVAAFLTLASGGVIAVQGYSSLG+IGIEALTGFLSAFLNVRVVAPVIAGIA
Sbjct 61 ALVMIGGTVGVAAFLTLASGGVIAVQGYSSLGNIGIEALTGFLSAFLNVRVVAPVIAGIA 120
Query 121 LAATIGAGATAQLGAMRVSEEIDAVECMAVHSVSYLVSTRLIAGLVAIIPLYSLSVLAAF 180
LAATIGAGATAQLGAMRVSEEIDAVECMAV SVSYLVSTRLIAGL+AIIPLYSLSVLAAF
Sbjct 121 LAATIGAGATAQLGAMRVSEEIDAVECMAVESVSYLVSTRLIAGLIAIIPLYSLSVLAAF 180
Query 181 FAARFTTVFVNGQSAGLYDHYFNTFLIPSDLLWSFMQAIAMSIAVMLVHTYYGYNASGGS 240
FAARFTTV++NGQS GLYDHYFNTFLIPSDLLWSF+QAI MSIAVMLVHTYYGYNASGG
Sbjct 181 FAARFTTVYINGQSKGLYDHYFNTFLIPSDLLWSFLQAIVMSIAVMLVHTYYGYNASGGP 240
Query 241 VGVGVAVGQAVRTSLIVVVVITLFISLAVYGASGNFNLSG 280
VGVG+AVGQAVRTSLIVVVVITLFISLAVYGASGNFNLSG
Sbjct 241 VGVGIAVGQAVRTSLIVVVVITLFISLAVYGASGNFNLSG 280
>gi|118470997|ref|YP_890127.1| TrnB2 protein [Mycobacterium smegmatis str. MC2 155]
gi|118172284|gb|ABK73180.1| TrnB2 protein [Mycobacterium smegmatis str. MC2 155]
Length=287
Score = 481 bits (1237), Expect = 7e-134, Method: Compositional matrix adjust.
Identities = 250/280 (90%), Positives = 267/280 (96%), Gaps = 0/280 (0%)
Query 1 MSYDVTIRFRRFFSRLQRPVDNFGEQALFYGETMRYVPNAITRYRKETVRLVAEMTLGAG 60
MSYD T+RFRR F + + VD GEQALFYGETMRY+PNA TRYRKET+RLVAEMT+GAG
Sbjct 8 MSYDATLRFRRLFRGVPKTVDTVGEQALFYGETMRYLPNAFTRYRKETIRLVAEMTMGAG 67
Query 61 ALVMIGGTVGVAAFLTLASGGVIAVQGYSSLGDIGIEALTGFLSAFLNVRVVAPVIAGIA 120
ALVMIGGTVGVAAFLTLASGGVIAVQGYSSLG+IGIEALTGFLSAFLNVR+VAPVIAGIA
Sbjct 68 ALVMIGGTVGVAAFLTLASGGVIAVQGYSSLGNIGIEALTGFLSAFLNVRIVAPVIAGIA 127
Query 121 LAATIGAGATAQLGAMRVSEEIDAVECMAVHSVSYLVSTRLIAGLVAIIPLYSLSVLAAF 180
LAATIGAGATAQLGAMRV+EEIDAVE MAVH+VSYLVSTRL+AGL+AI+PLYSLSVLAAF
Sbjct 128 LAATIGAGATAQLGAMRVAEEIDAVESMAVHAVSYLVSTRLLAGLIAIVPLYSLSVLAAF 187
Query 181 FAARFTTVFVNGQSAGLYDHYFNTFLIPSDLLWSFMQAIAMSIAVMLVHTYYGYNASGGS 240
FAARFTTVF+NGQSAGLYDHYFNTFLIPSDLLWSF+QAI M+IAVMLVHTYYGYNASGG
Sbjct 188 FAARFTTVFINGQSAGLYDHYFNTFLIPSDLLWSFLQAIVMAIAVMLVHTYYGYNASGGP 247
Query 241 VGVGVAVGQAVRTSLIVVVVITLFISLAVYGASGNFNLSG 280
VGVG+AVGQAVRTSLIVVV ITLFISLAVYGASGNFNLSG
Sbjct 248 VGVGIAVGQAVRTSLIVVVTITLFISLAVYGASGNFNLSG 287
>gi|120406151|ref|YP_955980.1| hypothetical protein Mvan_5203 [Mycobacterium vanbaalenii PYR-1]
gi|119958969|gb|ABM15974.1| protein of unknown function DUF140 [Mycobacterium vanbaalenii
PYR-1]
Length=280
Score = 472 bits (1214), Expect = 3e-131, Method: Compositional matrix adjust.
Identities = 246/280 (88%), Positives = 263/280 (94%), Gaps = 0/280 (0%)
Query 1 MSYDVTIRFRRFFSRLQRPVDNFGEQALFYGETMRYVPNAITRYRKETVRLVAEMTLGAG 60
MSYD TIRFRR R VD GEQALFYGET RYVPNA+TRYRKET+RL+AEM++G G
Sbjct 1 MSYDATIRFRRLLRFFPRAVDTVGEQALFYGETFRYVPNALTRYRKETIRLIAEMSMGTG 60
Query 61 ALVMIGGTVGVAAFLTLASGGVIAVQGYSSLGDIGIEALTGFLSAFLNVRVVAPVIAGIA 120
ALVMIGGTVGVAAF+TLASGGVIAVQGYSSLG+IGIEALTGFLSAFLNVR+VAPVIAGIA
Sbjct 61 ALVMIGGTVGVAAFMTLASGGVIAVQGYSSLGNIGIEALTGFLSAFLNVRIVAPVIAGIA 120
Query 121 LAATIGAGATAQLGAMRVSEEIDAVECMAVHSVSYLVSTRLIAGLVAIIPLYSLSVLAAF 180
LAATIGAGATAQLGAMRV+EEIDAVE MAVH+VSYLVSTRLIAGL+AI+PLY+LSVLAAF
Sbjct 121 LAATIGAGATAQLGAMRVAEEIDAVESMAVHAVSYLVSTRLIAGLIAIVPLYALSVLAAF 180
Query 181 FAARFTTVFVNGQSAGLYDHYFNTFLIPSDLLWSFMQAIAMSIAVMLVHTYYGYNASGGS 240
FAARFTTV++NGQSAGLYDHYFNTFLIPSDLLWSF+QAI MSIAVMLVHTYYGYNASGG
Sbjct 181 FAARFTTVYINGQSAGLYDHYFNTFLIPSDLLWSFLQAIVMSIAVMLVHTYYGYNASGGP 240
Query 241 VGVGVAVGQAVRTSLIVVVVITLFISLAVYGASGNFNLSG 280
VGVG+AVGQAVRTSLIVVV I LFISLAVYGASGNFNLSG
Sbjct 241 VGVGIAVGQAVRTSLIVVVTIVLFISLAVYGASGNFNLSG 280
>gi|145222147|ref|YP_001132825.1| hypothetical protein Mflv_1555 [Mycobacterium gilvum PYR-GCK]
gi|315442586|ref|YP_004075465.1| ABC transporter involved in resistance to organic solvents, permease
[Mycobacterium sp. Spyr1]
gi|145214633|gb|ABP44037.1| protein of unknown function DUF140 [Mycobacterium gilvum PYR-GCK]
gi|315260889|gb|ADT97630.1| ABC-type transport system involved in resistance to organic solvents,
permease component [Mycobacterium sp. Spyr1]
Length=280
Score = 470 bits (1209), Expect = 1e-130, Method: Compositional matrix adjust.
Identities = 244/280 (88%), Positives = 262/280 (94%), Gaps = 0/280 (0%)
Query 1 MSYDVTIRFRRFFSRLQRPVDNFGEQALFYGETMRYVPNAITRYRKETVRLVAEMTLGAG 60
MSYD T+RFRR R VD GEQALFYGET RYVPNAITRYRKET+RL+AEM++G G
Sbjct 1 MSYDATVRFRRMLRVFPRAVDTVGEQALFYGETFRYVPNAITRYRKETIRLIAEMSMGTG 60
Query 61 ALVMIGGTVGVAAFLTLASGGVIAVQGYSSLGDIGIEALTGFLSAFLNVRVVAPVIAGIA 120
ALVMIGGTVGVAAF+TLASGGVIAVQGYSSLG+IGIEALTGFLSAFLNVR+VAPVIAGIA
Sbjct 61 ALVMIGGTVGVAAFMTLASGGVIAVQGYSSLGNIGIEALTGFLSAFLNVRIVAPVIAGIA 120
Query 121 LAATIGAGATAQLGAMRVSEEIDAVECMAVHSVSYLVSTRLIAGLVAIIPLYSLSVLAAF 180
LAATIGAGATAQLGAMRV+EEIDAVE MAVH+VSYLVSTRLIAGL+AI+PLY+LSVLAAF
Sbjct 121 LAATIGAGATAQLGAMRVAEEIDAVEAMAVHAVSYLVSTRLIAGLIAIVPLYALSVLAAF 180
Query 181 FAARFTTVFVNGQSAGLYDHYFNTFLIPSDLLWSFMQAIAMSIAVMLVHTYYGYNASGGS 240
FAARFTTV++NGQSAGLYDHYFNTFL+PSDLLWSF+QAI MSIAVMLVHTYYGYNASGG
Sbjct 181 FAARFTTVYINGQSAGLYDHYFNTFLVPSDLLWSFLQAIVMSIAVMLVHTYYGYNASGGP 240
Query 241 VGVGVAVGQAVRTSLIVVVVITLFISLAVYGASGNFNLSG 280
VGVG+AVGQAVRTSLIVVV I L ISLAVYGASGNFNLSG
Sbjct 241 VGVGIAVGQAVRTSLIVVVTIVLMISLAVYGASGNFNLSG 280
>gi|333992271|ref|YP_004524885.1| hypothetical protein JDM601_3631 [Mycobacterium sp. JDM601]
gi|333488239|gb|AEF37631.1| membrane protein YrbE4B [Mycobacterium sp. JDM601]
Length=280
Score = 463 bits (1191), Expect = 1e-128, Method: Compositional matrix adjust.
Identities = 232/280 (83%), Positives = 261/280 (94%), Gaps = 0/280 (0%)
Query 1 MSYDVTIRFRRFFSRLQRPVDNFGEQALFYGETMRYVPNAITRYRKETVRLVAEMTLGAG 60
MSYD T+RFRR F + + VD+FGEQALFY +++RYVPNA+T+YRKETVRL+AE+T+G G
Sbjct 1 MSYDATLRFRRLFRWVPKAVDDFGEQALFYADSIRYVPNALTKYRKETVRLIAEITMGTG 60
Query 61 ALVMIGGTVGVAAFLTLASGGVIAVQGYSSLGDIGIEALTGFLSAFLNVRVVAPVIAGIA 120
AL +IGGTVGVA FLTLASGGVIAVQG+SSLG+IGIEALTGFLSAFLNVR+VAPV+AGIA
Sbjct 61 ALAIIGGTVGVATFLTLASGGVIAVQGFSSLGNIGIEALTGFLSAFLNVRIVAPVVAGIA 120
Query 121 LAATIGAGATAQLGAMRVSEEIDAVECMAVHSVSYLVSTRLIAGLVAIIPLYSLSVLAAF 180
LAATIGAG TAQLGAMRV+EEIDAVE MAVH+VSYLVSTRL+AGL+AIIPLYSLSVLAAF
Sbjct 121 LAATIGAGTTAQLGAMRVAEEIDAVEAMAVHAVSYLVSTRLVAGLIAIIPLYSLSVLAAF 180
Query 181 FAARFTTVFVNGQSAGLYDHYFNTFLIPSDLLWSFMQAIAMSIAVMLVHTYYGYNASGGS 240
FAAR TTVF+N QS GLYDHYF+TFLIP+DLLWSF+QAI MSIAVMLVHT YGYNA+GG
Sbjct 181 FAARSTTVFINSQSPGLYDHYFDTFLIPTDLLWSFLQAIIMSIAVMLVHTNYGYNAAGGP 240
Query 241 VGVGVAVGQAVRTSLIVVVVITLFISLAVYGASGNFNLSG 280
VGVG+AVGQAVRTSL+VVVVITLF+SLAVYG SGNFNLSG
Sbjct 241 VGVGIAVGQAVRTSLVVVVVITLFVSLAVYGGSGNFNLSG 280
>gi|120402601|ref|YP_952430.1| hypothetical protein Mvan_1595 [Mycobacterium vanbaalenii PYR-1]
gi|119955419|gb|ABM12424.1| protein of unknown function DUF140 [Mycobacterium vanbaalenii
PYR-1]
Length=280
Score = 422 bits (1085), Expect = 3e-116, Method: Compositional matrix adjust.
Identities = 210/280 (75%), Positives = 245/280 (88%), Gaps = 0/280 (0%)
Query 1 MSYDVTIRFRRFFSRLQRPVDNFGEQALFYGETMRYVPNAITRYRKETVRLVAEMTLGAG 60
M+ +R RR F R VD FGEQALFYG+++ +P A+ YR+ET RL+AEM GAG
Sbjct 1 MTPPAVLRLRRAFRHTPRLVDIFGEQALFYGQSLASLPLAVRLYRRETARLIAEMAFGAG 60
Query 61 ALVMIGGTVGVAAFLTLASGGVIAVQGYSSLGDIGIEALTGFLSAFLNVRVVAPVIAGIA 120
L++IGGT+GV FLTLASGGVIAVQGY+SLGDIGIEALTGFLSAFLNVR+VAPVIAGIA
Sbjct 61 GLLVIGGTLGVTVFLTLASGGVIAVQGYASLGDIGIEALTGFLSAFLNVRIVAPVIAGIA 120
Query 121 LAATIGAGATAQLGAMRVSEEIDAVECMAVHSVSYLVSTRLIAGLVAIIPLYSLSVLAAF 180
LAATIGAG+TAQLGAMR++EEIDA+E MAV S++YLV+TR+IAG++ I+PLYSL++L +F
Sbjct 121 LAATIGAGSTAQLGAMRIAEEIDALEVMAVRSMAYLVATRMIAGVIVIVPLYSLAILTSF 180
Query 181 FAARFTTVFVNGQSAGLYDHYFNTFLIPSDLLWSFMQAIAMSIAVMLVHTYYGYNASGGS 240
F+ARFTTV+++GQS GLYDHYFNTFLIP+DLLWSF+QAIAMSIAVMLVHTYYGYNA GG
Sbjct 181 FSARFTTVYLSGQSRGLYDHYFNTFLIPTDLLWSFLQAIAMSIAVMLVHTYYGYNAKGGP 240
Query 241 VGVGVAVGQAVRTSLIVVVVITLFISLAVYGASGNFNLSG 280
VGVGVA G AVRTSLIVVVVITL ISLAVYG+SG F LSG
Sbjct 241 VGVGVATGDAVRTSLIVVVVITLLISLAVYGSSGGFTLSG 280
>gi|169631232|ref|YP_001704881.1| hypothetical protein MAB_4154c [Mycobacterium abscessus ATCC
19977]
gi|169243199|emb|CAM64227.1| Conserved hypothetical protein [Mycobacterium abscessus]
Length=286
Score = 414 bits (1063), Expect = 1e-113, Method: Compositional matrix adjust.
Identities = 218/279 (79%), Positives = 252/279 (91%), Gaps = 0/279 (0%)
Query 2 SYDVTIRFRRFFSRLQRPVDNFGEQALFYGETMRYVPNAITRYRKETVRLVAEMTLGAGA 61
++ VT R+ L R D FGEQALFY +++ Y+P A+T+YRKET+R++AE+T+G GA
Sbjct 8 THTVTSYTVRYMRGLGRSFDKFGEQALFYAQSLSYIPAALTKYRKETIRVLAEITMGTGA 67
Query 62 LVMIGGTVGVAAFLTLASGGVIAVQGYSSLGDIGIEALTGFLSAFLNVRVVAPVIAGIAL 121
LVMIGGTVGVA FLTLASGGVIAVQGYSSLG+IGIEALTGFLSAFLNVR+VAPV+AGIA+
Sbjct 68 LVMIGGTVGVAVFLTLASGGVIAVQGYSSLGNIGIEALTGFLSAFLNVRIVAPVVAGIAM 127
Query 122 AATIGAGATAQLGAMRVSEEIDAVECMAVHSVSYLVSTRLIAGLVAIIPLYSLSVLAAFF 181
AATIGAG TAQLGAMRV+EEIDA+E MAVH++SYLVSTRL+AGL+AIIPLYSLSVLAAFF
Sbjct 128 AATIGAGTTAQLGAMRVAEEIDALETMAVHAISYLVSTRLVAGLIAIIPLYSLSVLAAFF 187
Query 182 AARFTTVFVNGQSAGLYDHYFNTFLIPSDLLWSFMQAIAMSIAVMLVHTYYGYNASGGSV 241
A+R TTV +NGQS G+YDHYFNTFL+P+DLLWSF+QAI MS+ VMLVHT YG+NASGG V
Sbjct 188 ASRATTVMINGQSPGVYDHYFNTFLVPTDLLWSFLQAIVMSVVVMLVHTSYGFNASGGPV 247
Query 242 GVGVAVGQAVRTSLIVVVVITLFISLAVYGASGNFNLSG 280
GVGVAVGQAVRTSLIVVV++TLFISLAVYG SGNFNLSG
Sbjct 248 GVGVAVGQAVRTSLIVVVLVTLFISLAVYGGSGNFNLSG 286
>gi|145225117|ref|YP_001135795.1| hypothetical protein Mflv_4539 [Mycobacterium gilvum PYR-GCK]
gi|315445484|ref|YP_004078363.1| ABC transporter involved in resistance to organic solvents, permease
[Mycobacterium sp. Spyr1]
gi|145217603|gb|ABP47007.1| protein of unknown function DUF140 [Mycobacterium gilvum PYR-GCK]
gi|315263787|gb|ADU00529.1| ABC-type transport system involved in resistance to organic solvents,
permease component [Mycobacterium sp. Spyr1]
Length=282
Score = 365 bits (937), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 181/273 (67%), Positives = 222/273 (82%), Gaps = 3/273 (1%)
Query 11 RFFSRLQRPVDNFG---EQALFYGETMRYVPNAITRYRKETVRLVAEMTLGAGALVMIGG 67
+ RL RPVD G E FYG + VP+A+ YR+E +RLVAE+++GAG L MIGG
Sbjct 10 QLVRRLGRPVDTLGGIGEHTAFYGRALAGVPHAVVHYRREIIRLVAEISMGAGTLAMIGG 69
Query 68 TVGVAAFLTLASGGVIAVQGYSSLGDIGIEALTGFLSAFLNVRVVAPVIAGIALAATIGA 127
TV + FLTLA+GG +AVQGYSSLGDIGIEALTGFL+AF+NVR+ APV+AGI LAAT GA
Sbjct 70 TVVIVGFLTLAAGGTLAVQGYSSLGDIGIEALTGFLAAFINVRISAPVVAGIGLAATFGA 129
Query 128 GATAQLGAMRVSEEIDAVECMAVHSVSYLVSTRLIAGLVAIIPLYSLSVLAAFFAARFTT 187
G TAQLGAMR++EEIDA+E M + V YLVSTR++AG++AI PLYS++V+ +F A++ TT
Sbjct 130 GVTAQLGAMRINEEIDALETMGIRPVEYLVSTRIVAGMIAIAPLYSIAVILSFLASKLTT 189
Query 188 VFVNGQSAGLYDHYFNTFLIPSDLLWSFMQAIAMSIAVMLVHTYYGYNASGGSVGVGVAV 247
V + GQSAGLY+HYF TFL P DLLWSF+QAI M++AV+LVHTY+GY A GG GVGVAV
Sbjct 190 VVLFGQSAGLYNHYFTTFLNPRDLLWSFLQAILMAMAVLLVHTYFGYFAGGGPSGVGVAV 249
Query 248 GQAVRTSLIVVVVITLFISLAVYGASGNFNLSG 280
G AVRTSLIVV+ +TL +SLAVYGA+GNFNLSG
Sbjct 250 GNAVRTSLIVVISVTLLVSLAVYGANGNFNLSG 282
>gi|226306857|ref|YP_002766817.1| YrbE family protein [Rhodococcus erythropolis PR4]
gi|229492717|ref|ZP_04386518.1| ABC-transporter integral membrane protein [Rhodococcus erythropolis
SK121]
gi|226185974|dbj|BAH34078.1| putative YrbE family protein [Rhodococcus erythropolis PR4]
gi|229320376|gb|EEN86196.1| ABC-transporter integral membrane protein [Rhodococcus erythropolis
SK121]
Length=290
Score = 360 bits (925), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 174/273 (64%), Positives = 222/273 (82%), Gaps = 0/273 (0%)
Query 8 RFRRFFSRLQRPVDNFGEQALFYGETMRYVPNAITRYRKETVRLVAEMTLGAGALVMIGG 67
R R +R R +D+ G QA+F+ + ++P AI ++ KE +RLVAE+++G GAL +IGG
Sbjct 18 RTRARVARTSRSIDDVGRQAVFFARAIAHIPWAIRKHPKEVLRLVAEISMGTGALAVIGG 77
Query 68 TVGVAAFLTLASGGVIAVQGYSSLGDIGIEALTGFLSAFLNVRVVAPVIAGIALAATIGA 127
TV V FLTLASGG IA+QG+SSLG+IG+EALTGF SAF+NVR+ APVIAGI L+ATIGA
Sbjct 78 TVAVVGFLTLASGGTIAIQGFSSLGNIGVEALTGFFSAFINVRIAAPVIAGIGLSATIGA 137
Query 128 GATAQLGAMRVSEEIDAVECMAVHSVSYLVSTRLIAGLVAIIPLYSLSVLAAFFAARFTT 187
G+TAQ+GAMR+SEEIDA+E MA+ SV Y+VSTR+ AG++AI+PLYSL+++ +F A RFTT
Sbjct 138 GSTAQIGAMRISEEIDALESMAISSVPYVVSTRVTAGMIAILPLYSLALVGSFLAGRFTT 197
Query 188 VFVNGQSAGLYDHYFNTFLIPSDLLWSFMQAIAMSIAVMLVHTYYGYNASGGSVGVGVAV 247
V + GQS+GLYDHYF TFL P D+ WSF+Q + M++ VML+HTYYGYNASGG GVG AV
Sbjct 198 VVLFGQSSGLYDHYFTTFLDPVDVAWSFVQVLVMALLVMLIHTYYGYNASGGPSGVGTAV 257
Query 248 GQAVRTSLIVVVVITLFISLAVYGASGNFNLSG 280
G+ VR SLI VV +TL +SLA+YG SGNFNLSG
Sbjct 258 GRGVRLSLICVVAVTLLVSLALYGGSGNFNLSG 290
>gi|108797254|ref|YP_637451.1| hypothetical protein Mmcs_0274 [Mycobacterium sp. MCS]
gi|119866339|ref|YP_936291.1| hypothetical protein Mkms_0284 [Mycobacterium sp. KMS]
gi|126432878|ref|YP_001068569.1| hypothetical protein Mjls_0265 [Mycobacterium sp. JLS]
gi|108767673|gb|ABG06395.1| protein of unknown function DUF140 [Mycobacterium sp. MCS]
gi|119692428|gb|ABL89501.1| protein of unknown function DUF140 [Mycobacterium sp. KMS]
gi|126232678|gb|ABN96078.1| protein of unknown function DUF140 [Mycobacterium sp. JLS]
Length=285
Score = 358 bits (920), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 175/275 (64%), Positives = 221/275 (81%), Gaps = 3/275 (1%)
Query 9 FRRFFSRLQRP---VDNFGEQALFYGETMRYVPNAITRYRKETVRLVAEMTLGAGALVMI 65
+ R S+ ++P V G+ LFYG + P+A YRKE VRL+AE+++GAG L MI
Sbjct 11 YPRVVSQFRKPASLVGRLGDHILFYGRALAGTPHAAMHYRKEIVRLIAEISMGAGTLAMI 70
Query 66 GGTVGVAAFLTLASGGVIAVQGYSSLGDIGIEALTGFLSAFLNVRVVAPVIAGIALAATI 125
GGTV + FLTLA+GG +AVQGYSSLGDIGIEALTGFL+AF+NVR+ APV+AGI LAAT
Sbjct 71 GGTVVIVGFLTLAAGGTLAVQGYSSLGDIGIEALTGFLAAFINVRISAPVVAGIGLAATF 130
Query 126 GAGATAQLGAMRVSEEIDAVECMAVHSVSYLVSTRLIAGLVAIIPLYSLSVLAAFFAARF 185
GAG TAQLGAMR++EE+DA+E M + + YLVSTR+IAG++AI PLYS++V+ +F A++
Sbjct 131 GAGVTAQLGAMRINEEVDALETMGIRPIEYLVSTRIIAGMIAITPLYSVAVILSFLASQL 190
Query 186 TTVFVNGQSAGLYDHYFNTFLIPSDLLWSFMQAIAMSIAVMLVHTYYGYNASGGSVGVGV 245
TTV + GQS GLYDHYFNTFL P DLLWSF+QAI M++ V+ +HTY+GY A+GG GVGV
Sbjct 191 TTVVLFGQSGGLYDHYFNTFLNPVDLLWSFLQAILMALTVLFIHTYFGYFATGGPAGVGV 250
Query 246 AVGQAVRTSLIVVVVITLFISLAVYGASGNFNLSG 280
AVG AVRTSLIVVV +TL +SL+VYG++GNFNLSG
Sbjct 251 AVGNAVRTSLIVVVAVTLLVSLSVYGSNGNFNLSG 285
>gi|111021669|ref|YP_704641.1| hypothetical protein RHA1_ro04697 [Rhodococcus jostii RHA1]
gi|110821199|gb|ABG96483.1| conserved hypothetical protein [Rhodococcus jostii RHA1]
Length=283
Score = 357 bits (915), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 185/273 (68%), Positives = 231/273 (85%), Gaps = 0/273 (0%)
Query 8 RFRRFFSRLQRPVDNFGEQALFYGETMRYVPNAITRYRKETVRLVAEMTLGAGALVMIGG 67
R R+ F+ R +D GEQALF+ + + P A+ Y KET+RL+AE+++G GAL +IGG
Sbjct 11 RTRKRFASASRSIDRLGEQALFFARAIGWAPRALMHYPKETLRLIAEISMGTGALAVIGG 70
Query 68 TVGVAAFLTLASGGVIAVQGYSSLGDIGIEALTGFLSAFLNVRVVAPVIAGIALAATIGA 127
TV + FLTL +GG IAVQGYSSLG+IG+EALTGF +AF+NVR+ APVIAGI LAATIGA
Sbjct 71 TVVIVGFLTLFTGGTIAVQGYSSLGNIGVEALTGFFAAFINVRIAAPVIAGIGLAATIGA 130
Query 128 GATAQLGAMRVSEEIDAVECMAVHSVSYLVSTRLIAGLVAIIPLYSLSVLAAFFAARFTT 187
G+TAQLGAMRVSEEIDA+E MA+ S+ YLVSTR++AG++AIIPLY+L+V+A+F A+RF T
Sbjct 131 GSTAQLGAMRVSEEIDALETMAIPSIPYLVSTRVMAGMIAIIPLYALAVIASFMASRFAT 190
Query 188 VFVNGQSAGLYDHYFNTFLIPSDLLWSFMQAIAMSIAVMLVHTYYGYNASGGSVGVGVAV 247
V + QS+G+YDHYF+TFLIP+D+LWSF QAI M+IA+ML+HTYYG+NASGG VGVGVAV
Sbjct 191 VVLYDQSSGVYDHYFSTFLIPTDILWSFAQAIVMAIAIMLIHTYYGFNASGGPVGVGVAV 250
Query 248 GQAVRTSLIVVVVITLFISLAVYGASGNFNLSG 280
G AVR+SLI VV +TL ISLA+YGASGNFNLSG
Sbjct 251 GNAVRSSLIAVVTVTLLISLAIYGASGNFNLSG 283
>gi|120403834|ref|YP_953663.1| hypothetical protein Mvan_2850 [Mycobacterium vanbaalenii PYR-1]
gi|119956652|gb|ABM13657.1| protein of unknown function DUF140 [Mycobacterium vanbaalenii
PYR-1]
Length=282
Score = 357 bits (915), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 177/273 (65%), Positives = 221/273 (81%), Gaps = 3/273 (1%)
Query 11 RFFSRLQRPVD---NFGEQALFYGETMRYVPNAITRYRKETVRLVAEMTLGAGALVMIGG 67
R ++ RPV G+ FYG + VP+A YRKE +RLVAE+++GAG L MIGG
Sbjct 10 RLAQQIGRPVGALGRIGDHTSFYGRALAGVPHAAMHYRKEIIRLVAEISMGAGTLAMIGG 69
Query 68 TVGVAAFLTLASGGVIAVQGYSSLGDIGIEALTGFLSAFLNVRVVAPVIAGIALAATIGA 127
T+ + FLTLA+GG +AVQGYSSLGDIGIEALTGFL+AF+NVR+ APV+AGI LAAT GA
Sbjct 70 TIVIVGFLTLAAGGTLAVQGYSSLGDIGIEALTGFLAAFINVRISAPVVAGIGLAATFGA 129
Query 128 GATAQLGAMRVSEEIDAVECMAVHSVSYLVSTRLIAGLVAIIPLYSLSVLAAFFAARFTT 187
G TAQLGAMR++EEIDA+E M + V YLVSTR++AG++AI PLYS++V+ +F A++ TT
Sbjct 130 GVTAQLGAMRINEEIDALETMGIRPVEYLVSTRIVAGMIAITPLYSIAVMLSFAASKLTT 189
Query 188 VFVNGQSAGLYDHYFNTFLIPSDLLWSFMQAIAMSIAVMLVHTYYGYNASGGSVGVGVAV 247
V + GQSAGLY+HYF TFL P DLLWSF+QAI M++AV+LVHTY+GY A+GG GVGVAV
Sbjct 190 VVLFGQSAGLYNHYFTTFLNPRDLLWSFLQAILMAMAVLLVHTYFGYFATGGPSGVGVAV 249
Query 248 GQAVRTSLIVVVVITLFISLAVYGASGNFNLSG 280
G AVRTSLIVV+ +TL +SL+VYGA+GNFNLSG
Sbjct 250 GNAVRTSLIVVISVTLLVSLSVYGANGNFNLSG 282
>gi|226364206|ref|YP_002781988.1| YrbE family protein [Rhodococcus opacus B4]
gi|226242695|dbj|BAH53043.1| putative YrbE family protein [Rhodococcus opacus B4]
Length=283
Score = 356 bits (913), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 185/273 (68%), Positives = 230/273 (85%), Gaps = 0/273 (0%)
Query 8 RFRRFFSRLQRPVDNFGEQALFYGETMRYVPNAITRYRKETVRLVAEMTLGAGALVMIGG 67
R RR F+ R +D GEQALF+ + P A+ YR+ET+RL+AE+++G GAL +IGG
Sbjct 11 RTRRRFASASRSIDRLGEQALFFARAIGSAPRALVHYRRETLRLIAEISMGTGALAVIGG 70
Query 68 TVGVAAFLTLASGGVIAVQGYSSLGDIGIEALTGFLSAFLNVRVVAPVIAGIALAATIGA 127
TV + FLTL +GG IAVQGYSSLG+IG+EALTGF +AF+NVR+ APVIAGI LAATIGA
Sbjct 71 TVVIVGFLTLFTGGTIAVQGYSSLGNIGVEALTGFFAAFINVRIAAPVIAGIGLAATIGA 130
Query 128 GATAQLGAMRVSEEIDAVECMAVHSVSYLVSTRLIAGLVAIIPLYSLSVLAAFFAARFTT 187
G+TAQLGAMRVSEEIDA+E MA+ S+ YLVSTR++AG++AIIPLY+L+V+A+F A+RF T
Sbjct 131 GSTAQLGAMRVSEEIDALETMAIPSIPYLVSTRVMAGMIAIIPLYALAVIASFMASRFAT 190
Query 188 VFVNGQSAGLYDHYFNTFLIPSDLLWSFMQAIAMSIAVMLVHTYYGYNASGGSVGVGVAV 247
V + QS+G+YDHYF+TFLIP+D+LWSF QAI M+IA+ML+HTYYG+NASGG VGVGVAV
Sbjct 191 VVLYDQSSGVYDHYFSTFLIPTDILWSFAQAIVMAIAIMLIHTYYGFNASGGPVGVGVAV 250
Query 248 GQAVRTSLIVVVVITLFISLAVYGASGNFNLSG 280
G AVR+SLI VV +TL ISLA+YG SGNFNLSG
Sbjct 251 GNAVRSSLIAVVTVTLLISLAIYGGSGNFNLSG 283
>gi|325674885|ref|ZP_08154572.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Rhodococcus equi ATCC 33707]
gi|325554471|gb|EGD24146.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Rhodococcus equi ATCC 33707]
Length=280
Score = 355 bits (912), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 186/274 (68%), Positives = 230/274 (84%), Gaps = 0/274 (0%)
Query 7 IRFRRFFSRLQRPVDNFGEQALFYGETMRYVPNAITRYRKETVRLVAEMTLGAGALVMIG 66
+R RR +R R VD GEQALF+ + + P A+ Y+KE +RL+AE+++G GAL +IG
Sbjct 7 VRTRRRIARTSRSVDRVGEQALFFWRALVWAPRALVHYKKEVLRLIAEISMGTGALAVIG 66
Query 67 GTVGVAAFLTLASGGVIAVQGYSSLGDIGIEALTGFLSAFLNVRVVAPVIAGIALAATIG 126
GTV + FLTL +GG IAVQG+SSLG+IG+EALTGF +AF+NVR+ APVIAGI LAATIG
Sbjct 67 GTVVIVGFLTLFTGGTIAVQGFSSLGNIGVEALTGFFAAFINVRIAAPVIAGIGLAATIG 126
Query 127 AGATAQLGAMRVSEEIDAVECMAVHSVSYLVSTRLIAGLVAIIPLYSLSVLAAFFAARFT 186
AG+TAQLGAMRVSEEIDA+E MA+ SV YLVSTR++AG++AI+PLYSL+V+A+F A+RF
Sbjct 127 AGSTAQLGAMRVSEEIDALESMAIPSVPYLVSTRVMAGMIAIVPLYSLAVIASFVASRFA 186
Query 187 TVFVNGQSAGLYDHYFNTFLIPSDLLWSFMQAIAMSIAVMLVHTYYGYNASGGSVGVGVA 246
TVF+ QS G+YDHYF+TFL P+D+LWSF QAIAM++AVML+HTYYG+NASGG VGVGVA
Sbjct 187 TVFLYDQSPGVYDHYFSTFLNPTDILWSFAQAIAMALAVMLIHTYYGFNASGGPVGVGVA 246
Query 247 VGQAVRTSLIVVVVITLFISLAVYGASGNFNLSG 280
VG AVR SLI VV +TL ISLA+YG SGNFNLSG
Sbjct 247 VGNAVRASLIAVVTVTLLISLAIYGQSGNFNLSG 280
>gi|312138209|ref|YP_004005545.1| integral membrane protein yrbe2b [Rhodococcus equi 103S]
gi|311887548|emb|CBH46860.1| putative integral membrane protein YrbE2B [Rhodococcus equi 103S]
Length=283
Score = 355 bits (912), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 186/274 (68%), Positives = 230/274 (84%), Gaps = 0/274 (0%)
Query 7 IRFRRFFSRLQRPVDNFGEQALFYGETMRYVPNAITRYRKETVRLVAEMTLGAGALVMIG 66
+R RR +R R VD GEQALF+ + + P A+ Y+KE +RL+AE+++G GAL +IG
Sbjct 10 VRTRRRIARTSRSVDRVGEQALFFWRALVWAPRALVHYKKEVLRLIAEISMGTGALAVIG 69
Query 67 GTVGVAAFLTLASGGVIAVQGYSSLGDIGIEALTGFLSAFLNVRVVAPVIAGIALAATIG 126
GTV + FLTL +GG IAVQG+SSLG+IG+EALTGF +AF+NVR+ APVIAGI LAATIG
Sbjct 70 GTVVIVGFLTLFTGGTIAVQGFSSLGNIGVEALTGFFAAFINVRIAAPVIAGIGLAATIG 129
Query 127 AGATAQLGAMRVSEEIDAVECMAVHSVSYLVSTRLIAGLVAIIPLYSLSVLAAFFAARFT 186
AG+TAQLGAMRVSEEIDA+E MA+ SV YLVSTR++AG++AI+PLYSL+V+A+F A+RF
Sbjct 130 AGSTAQLGAMRVSEEIDALESMAIPSVPYLVSTRVMAGMIAIVPLYSLAVIASFVASRFA 189
Query 187 TVFVNGQSAGLYDHYFNTFLIPSDLLWSFMQAIAMSIAVMLVHTYYGYNASGGSVGVGVA 246
TVF+ QS G+YDHYF+TFL P+D+LWSF QAIAM++AVML+HTYYG+NASGG VGVGVA
Sbjct 190 TVFLYDQSPGVYDHYFSTFLNPTDILWSFAQAIAMALAVMLIHTYYGFNASGGPVGVGVA 249
Query 247 VGQAVRTSLIVVVVITLFISLAVYGASGNFNLSG 280
VG AVR SLI VV +TL ISLA+YG SGNFNLSG
Sbjct 250 VGNAVRASLIAVVTVTLLISLAIYGQSGNFNLSG 283
>gi|226304448|ref|YP_002764406.1| YrbE family protein [Rhodococcus erythropolis PR4]
gi|229494442|ref|ZP_04388205.1| ABC-transporter integral membrane protein [Rhodococcus erythropolis
SK121]
gi|226183563|dbj|BAH31667.1| putative YrbE family protein [Rhodococcus erythropolis PR4]
gi|229318804|gb|EEN84662.1| ABC-transporter integral membrane protein [Rhodococcus erythropolis
SK121]
Length=283
Score = 355 bits (912), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 184/273 (68%), Positives = 230/273 (85%), Gaps = 0/273 (0%)
Query 8 RFRRFFSRLQRPVDNFGEQALFYGETMRYVPNAITRYRKETVRLVAEMTLGAGALVMIGG 67
R RR + R +D+ G+QALF+ + + + P A+ RY +ET+RL+AE+++G GAL +IGG
Sbjct 11 RTRRQIGSISRSIDSIGDQALFFAKALGHAPKALMRYPRETLRLIAEISMGTGALAVIGG 70
Query 68 TVGVAAFLTLASGGVIAVQGYSSLGDIGIEALTGFLSAFLNVRVVAPVIAGIALAATIGA 127
TV + FLTL +GG IAVQGYSSLG+IG+EALTGF +AF+NVR+ APVIAGI LAATIGA
Sbjct 71 TVVIVGFLTLFTGGTIAVQGYSSLGNIGVEALTGFFAAFINVRIAAPVIAGIGLAATIGA 130
Query 128 GATAQLGAMRVSEEIDAVECMAVHSVSYLVSTRLIAGLVAIIPLYSLSVLAAFFAARFTT 187
G+TAQLGAMRVSEEIDA+E MA+ S+ YLVSTR++AG++AIIPLYSL+V+A+F A+RF T
Sbjct 131 GSTAQLGAMRVSEEIDALETMAIPSIPYLVSTRVMAGMIAIIPLYSLAVIASFVASRFAT 190
Query 188 VFVNGQSAGLYDHYFNTFLIPSDLLWSFMQAIAMSIAVMLVHTYYGYNASGGSVGVGVAV 247
VF+ QS G+YDHYF TFLIP+D+LWSF QAI M++AVML+HTYYG+NA+GG VGVGVAV
Sbjct 191 VFLYNQSGGVYDHYFTTFLIPTDILWSFAQAIVMALAVMLIHTYYGFNATGGPVGVGVAV 250
Query 248 GQAVRTSLIVVVVITLFISLAVYGASGNFNLSG 280
G AVR SLI VV +TL ISLA+YG SGNFNLSG
Sbjct 251 GNAVRASLIAVVTVTLLISLAIYGGSGNFNLSG 283
>gi|118473565|ref|YP_887174.1| hypothetical protein MSMEG_2854 [Mycobacterium smegmatis str.
MC2 155]
gi|118174852|gb|ABK75748.1| conserved hypothetical protein [Mycobacterium smegmatis str.
MC2 155]
Length=281
Score = 353 bits (906), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 175/273 (65%), Positives = 221/273 (81%), Gaps = 3/273 (1%)
Query 11 RFFSRLQRPVD---NFGEQALFYGETMRYVPNAITRYRKETVRLVAEMTLGAGALVMIGG 67
R L+RPVD G+ FYG + P+A YR+E +RL+AE+++GAG L MIGG
Sbjct 9 RLTRELRRPVDVAGRLGDHTSFYGRALAGTPHAAMHYRREVIRLIAEISMGAGTLAMIGG 68
Query 68 TVGVAAFLTLASGGVIAVQGYSSLGDIGIEALTGFLSAFLNVRVVAPVIAGIALAATIGA 127
TV + FLTLA+GG +AVQGYSSLG+IGIEALTGFL+AF+NVR+ APV+AGI LAAT GA
Sbjct 69 TVVIVGFLTLAAGGTLAVQGYSSLGNIGIEALTGFLAAFINVRISAPVVAGIGLAATFGA 128
Query 128 GATAQLGAMRVSEEIDAVECMAVHSVSYLVSTRLIAGLVAIIPLYSLSVLAAFFAARFTT 187
G TAQLGAMR++EEIDA+E M + V YLVSTR++AG+VAI PLY+++V+ +F A+ TT
Sbjct 129 GVTAQLGAMRINEEIDALESMGIRPVEYLVSTRIVAGMVAITPLYAVAVILSFAASNLTT 188
Query 188 VFVNGQSAGLYDHYFNTFLIPSDLLWSFMQAIAMSIAVMLVHTYYGYNASGGSVGVGVAV 247
V + GQSAGLY+HYF+TFL P DLLWSF+QAI M+IA++LVHTY+G+ A+GG GVGVAV
Sbjct 189 VVMFGQSAGLYNHYFSTFLNPVDLLWSFLQAILMAIAILLVHTYFGFFAAGGPSGVGVAV 248
Query 248 GQAVRTSLIVVVVITLFISLAVYGASGNFNLSG 280
G AVRTSLIVV+ +TL +SLAVYG++GNFNLSG
Sbjct 249 GNAVRTSLIVVIAVTLLVSLAVYGSNGNFNLSG 281
>gi|108800638|ref|YP_640835.1| hypothetical protein Mmcs_3672 [Mycobacterium sp. MCS]
gi|119869777|ref|YP_939729.1| hypothetical protein Mkms_3745 [Mycobacterium sp. KMS]
gi|108771057|gb|ABG09779.1| protein of unknown function DUF140 [Mycobacterium sp. MCS]
gi|119695866|gb|ABL92939.1| protein of unknown function DUF140 [Mycobacterium sp. KMS]
Length=285
Score = 352 bits (902), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 174/276 (64%), Positives = 222/276 (81%), Gaps = 3/276 (1%)
Query 8 RFRRFFSRLQRPVD---NFGEQALFYGETMRYVPNAITRYRKETVRLVAEMTLGAGALVM 64
+ R ++RPVD G+ LFY + VP+A +RKE +RL+AE+++GAG L M
Sbjct 10 NYPRLARGVRRPVDVLGRLGDHMLFYIRAIGGVPHATLHFRKEIIRLIAEISMGAGTLAM 69
Query 65 IGGTVGVAAFLTLASGGVIAVQGYSSLGDIGIEALTGFLSAFLNVRVVAPVIAGIALAAT 124
IGGT+ + FLTLA+GG +AVQG+SSLGDIGIEALTGFL+AF+NVR+ AP +AGI LAAT
Sbjct 70 IGGTLVIVGFLTLAAGGTLAVQGFSSLGDIGIEALTGFLAAFINVRIAAPTVAGIGLAAT 129
Query 125 IGAGATAQLGAMRVSEEIDAVECMAVHSVSYLVSTRLIAGLVAIIPLYSLSVLAAFFAAR 184
GAG TAQLGAMR++EEIDA+E MA+ V YLVSTR+ AG++AI PLY+++V+ +F A++
Sbjct 130 FGAGVTAQLGAMRINEEIDALESMAIRPVEYLVSTRIAAGMIAITPLYAIAVILSFVASQ 189
Query 185 FTTVFVNGQSAGLYDHYFNTFLIPSDLLWSFMQAIAMSIAVMLVHTYYGYNASGGSVGVG 244
FTTV + GQSAGLYDHYF+TFL P DLLWSF+QA+ M+I ++LVHTY+GY ASGG GVG
Sbjct 190 FTTVMLFGQSAGLYDHYFDTFLNPIDLLWSFLQAVLMAITILLVHTYFGYFASGGPSGVG 249
Query 245 VAVGQAVRTSLIVVVVITLFISLAVYGASGNFNLSG 280
VAVG AVRTSLI+VV +TL +SL+VYG +GNFNLSG
Sbjct 250 VAVGNAVRTSLILVVSVTLLVSLSVYGRNGNFNLSG 285
>gi|126436262|ref|YP_001071953.1| hypothetical protein Mjls_3685 [Mycobacterium sp. JLS]
gi|126236062|gb|ABN99462.1| protein of unknown function DUF140 [Mycobacterium sp. JLS]
Length=285
Score = 348 bits (894), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 172/276 (63%), Positives = 220/276 (80%), Gaps = 3/276 (1%)
Query 8 RFRRFFSRLQRPVD---NFGEQALFYGETMRYVPNAITRYRKETVRLVAEMTLGAGALVM 64
+ R ++RPVD G+ LFY + VP+A +RKE +RL+AE+++GAG L M
Sbjct 10 NYPRLARGVRRPVDVLGRLGDHMLFYIRAIGGVPHATVHFRKEIIRLIAEISMGAGTLAM 69
Query 65 IGGTVGVAAFLTLASGGVIAVQGYSSLGDIGIEALTGFLSAFLNVRVVAPVIAGIALAAT 124
IGGT+ + FLTLA+GG +AVQG+SSLGDIGIEALTGFL+AF+NVR+ AP +AGI LAAT
Sbjct 70 IGGTLVIVGFLTLAAGGTLAVQGFSSLGDIGIEALTGFLAAFINVRIAAPTVAGIGLAAT 129
Query 125 IGAGATAQLGAMRVSEEIDAVECMAVHSVSYLVSTRLIAGLVAIIPLYSLSVLAAFFAAR 184
GAG TAQLGAMR++EEIDA+E MA+ V YLVSTR+ AG++AI PLY+++V+ +F A++
Sbjct 130 FGAGVTAQLGAMRINEEIDALESMAIRPVEYLVSTRIAAGMIAITPLYAIAVILSFLASQ 189
Query 185 FTTVFVNGQSAGLYDHYFNTFLIPSDLLWSFMQAIAMSIAVMLVHTYYGYNASGGSVGVG 244
F TV + GQS GLYDHYF+TFL P DLLWSF+QA+ M+I ++LVHTY+GY ASGG GVG
Sbjct 190 FVTVMLFGQSGGLYDHYFDTFLNPIDLLWSFLQAVLMAITILLVHTYFGYFASGGPSGVG 249
Query 245 VAVGQAVRTSLIVVVVITLFISLAVYGASGNFNLSG 280
VAVG AVRTSLI+VV +TL +SL+VYG +GNFNLSG
Sbjct 250 VAVGNAVRTSLILVVSVTLLVSLSVYGRNGNFNLSG 285
>gi|54022503|ref|YP_116745.1| putative YrbE family protein [Nocardia farcinica IFM 10152]
gi|54014011|dbj|BAD55381.1| putative YrbE family protein [Nocardia farcinica IFM 10152]
Length=283
Score = 348 bits (893), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 184/283 (66%), Positives = 234/283 (83%), Gaps = 3/283 (1%)
Query 1 MSYDVTIRFRRFFSRLQR---PVDNFGEQALFYGETMRYVPNAITRYRKETVRLVAEMTL 57
M++ + RF R R++R +D+ G+ A+FY + + +P A+ YR ET+RL+AE+++
Sbjct 1 MAFVIQSRFPRAVRRVRRMSDSLDSVGKHAVFYAQALASIPRALMHYRTETIRLIAEISM 60
Query 58 GAGALVMIGGTVGVAAFLTLASGGVIAVQGYSSLGDIGIEALTGFLSAFLNVRVVAPVIA 117
G GAL +IGGTV + FLTL SGG IAVQGYSSLG+IG+EALTGF SAFLNVR+ APVI+
Sbjct 61 GTGALAVIGGTVVIVGFLTLFSGGTIAVQGYSSLGNIGVEALTGFFSAFLNVRIAAPVIS 120
Query 118 GIALAATIGAGATAQLGAMRVSEEIDAVECMAVHSVSYLVSTRLIAGLVAIIPLYSLSVL 177
GI LAATIGAG+TAQLGAMRVSEEIDA+E MA+ V YL+ TR++AG++AI+PLY+L+V+
Sbjct 121 GIGLAATIGAGSTAQLGAMRVSEEIDALETMAIRPVPYLIGTRVLAGMIAIVPLYALAVI 180
Query 178 AAFFAARFTTVFVNGQSAGLYDHYFNTFLIPSDLLWSFMQAIAMSIAVMLVHTYYGYNAS 237
A+FFAARF TV + GQSAG+YDHYF+TFLIPSD+LWSF QAI M++AVM++HTYYGY A+
Sbjct 181 ASFFAARFATVVIYGQSAGVYDHYFSTFLIPSDILWSFSQAILMALAVMMIHTYYGYFAA 240
Query 238 GGSVGVGVAVGQAVRTSLIVVVVITLFISLAVYGASGNFNLSG 280
GG VGVGVAVG AVR SL+ VV +TL +SLA+YG SGNFNLSG
Sbjct 241 GGPVGVGVAVGNAVRASLVAVVTVTLLMSLAIYGTSGNFNLSG 283
>gi|333992926|ref|YP_004525540.1| hypothetical protein JDM601_4286 [Mycobacterium sp. JDM601]
gi|333488894|gb|AEF38286.1| integral membrane protein YrbE4b [Mycobacterium sp. JDM601]
Length=244
Score = 345 bits (886), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 170/244 (70%), Positives = 211/244 (87%), Gaps = 0/244 (0%)
Query 37 VPNAITRYRKETVRLVAEMTLGAGALVMIGGTVGVAAFLTLASGGVIAVQGYSSLGDIGI 96
+P+A T YR+E +RL+AE+++GAG L MIGGTV + FLTLA+GG +AVQGYSSLGDIGI
Sbjct 1 MPHAATGYRREVIRLIAEISMGAGTLAMIGGTVVIVGFLTLAAGGTLAVQGYSSLGDIGI 60
Query 97 EALTGFLSAFLNVRVVAPVIAGIALAATIGAGATAQLGAMRVSEEIDAVECMAVHSVSYL 156
EALTGFL+AF+NVR+ APV+AGI LAAT GAG TAQLGAMR++EEIDA+E M + +V YL
Sbjct 61 EALTGFLAAFINVRISAPVVAGIGLAATFGAGVTAQLGAMRINEEIDALETMGIRAVEYL 120
Query 157 VSTRLIAGLVAIIPLYSLSVLAAFFAARFTTVFVNGQSAGLYDHYFNTFLIPSDLLWSFM 216
VSTR++AG+VAI PLYS++V+ +F A++ TTV + GQSAGLY+HYF TFL P DLLWSF+
Sbjct 121 VSTRIVAGMVAITPLYSIAVILSFAASKLTTVVMFGQSAGLYNHYFGTFLNPKDLLWSFL 180
Query 217 QAIAMSIAVMLVHTYYGYNASGGSVGVGVAVGQAVRTSLIVVVVITLFISLAVYGASGNF 276
QAI M+IAV+LVHTY+GY ASGG GVGVAVG AVRTSLIVV+ +TL +SL+VYG++GNF
Sbjct 181 QAILMAIAVLLVHTYFGYFASGGPSGVGVAVGNAVRTSLIVVISVTLLVSLSVYGSNGNF 240
Query 277 NLSG 280
NLSG
Sbjct 241 NLSG 244
>gi|41406856|ref|NP_959692.1| hypothetical protein MAP0758 [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|41395206|gb|AAS03075.1| hypothetical protein MAP_0758 [Mycobacterium avium subsp. paratuberculosis
K-10]
Length=281
Score = 343 bits (879), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 176/275 (64%), Positives = 225/275 (82%), Gaps = 3/275 (1%)
Query 9 FRRFFSRLQRPVD---NFGEQALFYGETMRYVPNAITRYRKETVRLVAEMTLGAGALVMI 65
+ R +L+RPV G+ ALFYG+ + +P A TRY +E VRLVAE+++GAG L MI
Sbjct 7 YPRLTRQLERPVALLAGIGDHALFYGKALAGMPFAATRYTREVVRLVAEISMGAGTLAMI 66
Query 66 GGTVGVAAFLTLASGGVIAVQGYSSLGDIGIEALTGFLSAFLNVRVVAPVIAGIALAATI 125
GGTV + FLTLA+GG +A+QGY+SLG+IGIEALTGFL+AF+NVR+VAPV+AGI LAAT
Sbjct 67 GGTVVIVGFLTLAAGGTLAIQGYTSLGNIGIEALTGFLAAFINVRIVAPVVAGIGLAATF 126
Query 126 GAGATAQLGAMRVSEEIDAVECMAVHSVSYLVSTRLIAGLVAIIPLYSLSVLAAFFAARF 185
GAG TAQLGAMR++EE+DA+E MA+ V+YLVSTR++AG++AI PLYS++V+ +F A++F
Sbjct 127 GAGVTAQLGAMRINEEVDALESMAIRPVAYLVSTRILAGMLAITPLYSIAVILSFVASQF 186
Query 186 TTVFVNGQSAGLYDHYFNTFLIPSDLLWSFMQAIAMSIAVMLVHTYYGYNASGGSVGVGV 245
TT F+ GQS GLY HYFNTFL P DLLWSF+QAI M++ ++L+HTYYGY ASGG GVG
Sbjct 187 TTTFLLGQSQGLYQHYFNTFLNPIDLLWSFLQAILMALTILLIHTYYGYFASGGPAGVGN 246
Query 246 AVGQAVRTSLIVVVVITLFISLAVYGASGNFNLSG 280
A G AVRTSLIVVV +TL +SL++YG +GNFNLSG
Sbjct 247 ATGNAVRTSLIVVVSVTLLVSLSIYGTNGNFNLSG 281
>gi|342860431|ref|ZP_08717082.1| TrnB2 protein [Mycobacterium colombiense CECT 3035]
gi|342132086|gb|EGT85327.1| TrnB2 protein [Mycobacterium colombiense CECT 3035]
Length=281
Score = 342 bits (878), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 175/275 (64%), Positives = 225/275 (82%), Gaps = 3/275 (1%)
Query 9 FRRFFSRLQRPVDNFG---EQALFYGETMRYVPNAITRYRKETVRLVAEMTLGAGALVMI 65
+ R +L+RPV FG + +LFYG+ + VP A T YR+E +RL+AE+++GAG L MI
Sbjct 7 YPRLTRQLERPVAFFGRIGDHSLFYGKALAGVPFAATHYRREVIRLIAEISMGAGTLAMI 66
Query 66 GGTVGVAAFLTLASGGVIAVQGYSSLGDIGIEALTGFLSAFLNVRVVAPVIAGIALAATI 125
GGTV + FLTLA+GG +A+QGY+SLG+IGIEALTGFLSAF+NVR+ APV+AGI LAAT
Sbjct 67 GGTVVIVGFLTLAAGGTLAIQGYTSLGNIGIEALTGFLSAFINVRIAAPVVAGIGLAATF 126
Query 126 GAGATAQLGAMRVSEEIDAVECMAVHSVSYLVSTRLIAGLVAIIPLYSLSVLAAFFAARF 185
GAG TAQLGAMR++EE+DA+E MA+ V+YLVSTR++AG++AI PLYS++V+ +F A++F
Sbjct 127 GAGVTAQLGAMRINEEVDALESMAIRPVAYLVSTRILAGMMAITPLYSIAVILSFVASQF 186
Query 186 TTVFVNGQSAGLYDHYFNTFLIPSDLLWSFMQAIAMSIAVMLVHTYYGYNASGGSVGVGV 245
TT F+ GQS GLY HYFNTFL P DLLWSF+QAI M++ ++L+HTYYGY ASGG GVG
Sbjct 187 TTTFLLGQSQGLYQHYFNTFLNPIDLLWSFLQAILMALTILLIHTYYGYFASGGPAGVGN 246
Query 246 AVGQAVRTSLIVVVVITLFISLAVYGASGNFNLSG 280
A G AVRTSLIVVV +TL +SL++YG +GNFNLSG
Sbjct 247 ATGNAVRTSLIVVVSVTLLVSLSIYGTNGNFNLSG 281
>gi|118466445|ref|YP_880208.1| TrnB2 protein [Mycobacterium avium 104]
gi|118167732|gb|ABK68629.1| TrnB2 protein [Mycobacterium avium 104]
Length=281
Score = 341 bits (875), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 175/275 (64%), Positives = 224/275 (82%), Gaps = 3/275 (1%)
Query 9 FRRFFSRLQRPVD---NFGEQALFYGETMRYVPNAITRYRKETVRLVAEMTLGAGALVMI 65
+ R +L+RPV G+ ALFYG+ + +P A TRY +E VRLVAE+++GAG L MI
Sbjct 7 YPRLTRQLERPVALLAGIGDHALFYGKALAGMPFAATRYTREVVRLVAEISMGAGTLAMI 66
Query 66 GGTVGVAAFLTLASGGVIAVQGYSSLGDIGIEALTGFLSAFLNVRVVAPVIAGIALAATI 125
GGTV + FLTLA+GG +A+QGY+SLG+IGIEALTGFL+AF+NVR+ APV+AGI LAAT
Sbjct 67 GGTVVIVGFLTLAAGGTLAIQGYTSLGNIGIEALTGFLAAFINVRIAAPVVAGIGLAATF 126
Query 126 GAGATAQLGAMRVSEEIDAVECMAVHSVSYLVSTRLIAGLVAIIPLYSLSVLAAFFAARF 185
GAG TAQLGAMR++EE+DA+E MA+ V+YLVSTR++AG++AI PLYS++V+ +F A++F
Sbjct 127 GAGVTAQLGAMRINEEVDALESMAIRPVAYLVSTRILAGMLAITPLYSIAVILSFVASQF 186
Query 186 TTVFVNGQSAGLYDHYFNTFLIPSDLLWSFMQAIAMSIAVMLVHTYYGYNASGGSVGVGV 245
TT F+ GQS GLY HYFNTFL P DLLWSF+QAI M++ ++L+HTYYGY ASGG GVG
Sbjct 187 TTTFLLGQSQGLYQHYFNTFLNPIDLLWSFLQAILMALTILLIHTYYGYFASGGPAGVGN 246
Query 246 AVGQAVRTSLIVVVVITLFISLAVYGASGNFNLSG 280
A G AVRTSLIVVV +TL +SL++YG +GNFNLSG
Sbjct 247 ATGNAVRTSLIVVVSVTLLVSLSIYGTNGNFNLSG 281
>gi|226361937|ref|YP_002779715.1| YrbE family protein [Rhodococcus opacus B4]
gi|226240422|dbj|BAH50770.1| putative YrbE family protein [Rhodococcus opacus B4]
Length=286
Score = 341 bits (874), Expect = 9e-92, Method: Compositional matrix adjust.
Identities = 171/263 (66%), Positives = 225/263 (86%), Gaps = 0/263 (0%)
Query 18 RPVDNFGEQALFYGETMRYVPNAITRYRKETVRLVAEMTLGAGALVMIGGTVGVAAFLTL 77
R + G QA F+G+T+R P+AI+ Y+KETVRL+AE+ +G+GA+ +IGGTV + F+TL
Sbjct 24 RILKAIGHQADFFGKTIRLAPHAISSYKKETVRLIAEIGMGSGAMAIIGGTVVIVGFMTL 83
Query 78 ASGGVIAVQGYSSLGDIGIEALTGFLSAFLNVRVVAPVIAGIALAATIGAGATAQLGAMR 137
+ G ++A+QG+SSLG+IG+EALTGF +AF+NVR+VAPVI+GIALAATIGAGATAQLGAMR
Sbjct 84 SGGTLLAIQGFSSLGNIGVEALTGFFAAFINVRIVAPVISGIALAATIGAGATAQLGAMR 143
Query 138 VSEEIDAVECMAVHSVSYLVSTRLIAGLVAIIPLYSLSVLAAFFAARFTTVFVNGQSAGL 197
+SEEIDA+E M + S+SYLVSTRLIAG+++I+PLYS++V+ +F A++FTT +V GQS+G+
Sbjct 144 ISEEIDALEVMGIRSMSYLVSTRLIAGMISIVPLYSMAVIMSFVASQFTTTYVYGQSSGV 203
Query 198 YDHYFNTFLIPSDLLWSFMQAIAMSIAVMLVHTYYGYNASGGSVGVGVAVGQAVRTSLIV 257
YDHYF TFL P+DL WSF+QA+ M++ VML+H YYGY+A GG GVG AVG+AVRTSLI
Sbjct 204 YDHYFTTFLRPTDLFWSFLQAVVMALVVMLIHCYYGYHARGGPAGVGEAVGRAVRTSLIA 263
Query 258 VVVITLFISLAVYGASGNFNLSG 280
VV +TL SLA+YGASGNFNL+G
Sbjct 264 VVSVTLIASLAIYGASGNFNLAG 286
>gi|254773836|ref|ZP_05215352.1| TrnB2 protein [Mycobacterium avium subsp. avium ATCC 25291]
Length=281
Score = 340 bits (871), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 174/275 (64%), Positives = 224/275 (82%), Gaps = 3/275 (1%)
Query 9 FRRFFSRLQRP---VDNFGEQALFYGETMRYVPNAITRYRKETVRLVAEMTLGAGALVMI 65
+ R +L+RP + G+ ALFYG+ + +P A TRY +E VRLVAE+++GAG L MI
Sbjct 7 YPRLTRQLERPDALLAGIGDHALFYGKALAGMPFAATRYTREVVRLVAEISMGAGTLAMI 66
Query 66 GGTVGVAAFLTLASGGVIAVQGYSSLGDIGIEALTGFLSAFLNVRVVAPVIAGIALAATI 125
GGTV + FLTLA+GG +A+QGY+SLG+IGIEALTGFL+AF+NVR+ APV+AGI LAAT
Sbjct 67 GGTVVIVGFLTLAAGGTLAIQGYTSLGNIGIEALTGFLAAFINVRIAAPVVAGIGLAATF 126
Query 126 GAGATAQLGAMRVSEEIDAVECMAVHSVSYLVSTRLIAGLVAIIPLYSLSVLAAFFAARF 185
GAG TAQLGAMR++EE+DA+E MA+ V+YLVSTR++AG++AI PLYS++V+ +F A++F
Sbjct 127 GAGVTAQLGAMRINEEVDALESMAIRPVAYLVSTRILAGMLAITPLYSIAVILSFVASQF 186
Query 186 TTVFVNGQSAGLYDHYFNTFLIPSDLLWSFMQAIAMSIAVMLVHTYYGYNASGGSVGVGV 245
TT F+ GQS GLY HYFNTFL P DLLWSF+QAI M++ ++L+HTYYGY ASGG GVG
Sbjct 187 TTTFLLGQSQGLYQHYFNTFLNPIDLLWSFLQAILMALTILLIHTYYGYFASGGPAGVGN 246
Query 246 AVGQAVRTSLIVVVVITLFISLAVYGASGNFNLSG 280
A G AVRTSLIVVV +TL +SL++YG +GNFNLSG
Sbjct 247 ATGNAVRTSLIVVVSVTLLVSLSIYGTNGNFNLSG 281
>gi|315443551|ref|YP_004076430.1| ABC transporter involved in resistance to organic solvents, permease
[Mycobacterium sp. Spyr1]
gi|315261854|gb|ADT98595.1| ABC-type transport system involved in resistance to organic solvents,
permease component [Mycobacterium sp. Spyr1]
Length=285
Score = 339 bits (869), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 178/276 (65%), Positives = 223/276 (81%), Gaps = 3/276 (1%)
Query 8 RFRRFFSRLQRPV---DNFGEQALFYGETMRYVPNAITRYRKETVRLVAEMTLGAGALVM 64
RF R L RPV G+ LFYG + VP+A +RKE +RL+AE+++GAG L M
Sbjct 10 RFPRLVDNLGRPVAVLGRLGDHVLFYGRAVAGVPHAAVHFRKEIIRLIAEISMGAGTLAM 69
Query 65 IGGTVGVAAFLTLASGGVIAVQGYSSLGDIGIEALTGFLSAFLNVRVVAPVIAGIALAAT 124
IGGTV + FLTLA+GG +A+QGYSSLGDIGIEALTGFL+AF+NVR+ APV+AGI LAAT
Sbjct 70 IGGTVVIVGFLTLAAGGTLAIQGYSSLGDIGIEALTGFLAAFINVRIAAPVVAGIGLAAT 129
Query 125 IGAGATAQLGAMRVSEEIDAVECMAVHSVSYLVSTRLIAGLVAIIPLYSLSVLAAFFAAR 184
GAG TAQLGAMR++EEIDA+E M + V YLVSTR++AG+VAI PLYS++V+ +F A++
Sbjct 130 FGAGVTAQLGAMRINEEIDALESMGIRPVEYLVSTRIVAGMVAITPLYSIAVILSFIASQ 189
Query 185 FTTVFVNGQSAGLYDHYFNTFLIPSDLLWSFMQAIAMSIAVMLVHTYYGYNASGGSVGVG 244
FTTV + GQS GLYDHYF+TFL P DLLWSF+QA+ M+IA++LVHTY+GY ASGG GVG
Sbjct 190 FTTVVLFGQSGGLYDHYFDTFLNPIDLLWSFLQAVLMAIAILLVHTYFGYFASGGPSGVG 249
Query 245 VAVGQAVRTSLIVVVVITLFISLAVYGASGNFNLSG 280
AVG AVRTSL+VVV +TL +SL++YG++GNFNLSG
Sbjct 250 AAVGNAVRTSLVVVVSVTLLVSLSIYGSNGNFNLSG 285
>gi|336461222|gb|EGO40098.1| ABC-type transport system involved in resistance to organic solvents,
permease component [Mycobacterium avium subsp. paratuberculosis
S397]
Length=281
Score = 337 bits (864), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 174/275 (64%), Positives = 223/275 (82%), Gaps = 3/275 (1%)
Query 9 FRRFFSRLQRPVD---NFGEQALFYGETMRYVPNAITRYRKETVRLVAEMTLGAGALVMI 65
+ R +L+RPV G+ ALFYG+ + +P A TRY +E VRLVAE+++GAG L MI
Sbjct 7 YPRLTRQLERPVALLAGIGDHALFYGKALAGMPFAATRYTREVVRLVAEISMGAGTLAMI 66
Query 66 GGTVGVAAFLTLASGGVIAVQGYSSLGDIGIEALTGFLSAFLNVRVVAPVIAGIALAATI 125
GGTV + FLTLA+GG +A+QGY+SLG+IGIEALTGFL+AF+NVR+ APV+AGI LAAT
Sbjct 67 GGTVVIVGFLTLAAGGTLAIQGYTSLGNIGIEALTGFLAAFINVRIAAPVVAGIGLAATF 126
Query 126 GAGATAQLGAMRVSEEIDAVECMAVHSVSYLVSTRLIAGLVAIIPLYSLSVLAAFFAARF 185
GAG TAQLGAMR++EE+DA+E MA+ V+YLVSTR++AG++AI PLYS++V+ +F A++F
Sbjct 127 GAGVTAQLGAMRINEEVDALESMAIRPVAYLVSTRILAGMLAITPLYSIAVILSFVASQF 186
Query 186 TTVFVNGQSAGLYDHYFNTFLIPSDLLWSFMQAIAMSIAVMLVHTYYGYNASGGSVGVGV 245
TT F+ GQS GLY HYFNTFL P DLLWSF+QAI M++ ++L+HTYYG ASGG GVG
Sbjct 187 TTTFLLGQSQGLYQHYFNTFLNPIDLLWSFLQAILMALTILLIHTYYGDFASGGPAGVGN 246
Query 246 AVGQAVRTSLIVVVVITLFISLAVYGASGNFNLSG 280
A G AVRTSLIVVV +TL +SL++YG +GNFNLSG
Sbjct 247 ATGNAVRTSLIVVVSVTLLVSLSIYGTNGNFNLSG 281
>gi|118469369|ref|YP_889051.1| ABC transporter transmembrane protein [Mycobacterium smegmatis
str. MC2 155]
gi|118170656|gb|ABK71552.1| ABC-transporter integral membrane protein [Mycobacterium smegmatis
str. MC2 155]
Length=282
Score = 337 bits (864), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 176/273 (65%), Positives = 222/273 (82%), Gaps = 0/273 (0%)
Query 8 RFRRFFSRLQRPVDNFGEQALFYGETMRYVPNAITRYRKETVRLVAEMTLGAGALVMIGG 67
R R F++ + G+ LFY + P+A YRKE VRL+AE+++GAG L MIGG
Sbjct 10 RLTRQFNKPVATLSRVGDHTLFYLRAIAGTPHAALHYRKELVRLIAEISMGAGTLAMIGG 69
Query 68 TVGVAAFLTLASGGVIAVQGYSSLGDIGIEALTGFLSAFLNVRVVAPVIAGIALAATIGA 127
TV + FLTLA+GGV+A+QGYSSLG+IGIEALTGFLSAF+NVR+ APV+AGI LAAT GA
Sbjct 70 TVVIVGFLTLATGGVLAIQGYSSLGNIGIEALTGFLSAFINVRIAAPVVAGIGLAATFGA 129
Query 128 GATAQLGAMRVSEEIDAVECMAVHSVSYLVSTRLIAGLVAIIPLYSLSVLAAFFAARFTT 187
G TAQLGAMR++EEIDA+E MA+ V YLVSTR++AG++AI PLY+++V+ +F A++FTT
Sbjct 130 GVTAQLGAMRINEEIDALESMAIRPVEYLVSTRIVAGMIAITPLYAIAVILSFLASQFTT 189
Query 188 VFVNGQSAGLYDHYFNTFLIPSDLLWSFMQAIAMSIAVMLVHTYYGYNASGGSVGVGVAV 247
V + GQS GLY+HYF+TFL P DLLWSF+QAI M+I ++L+HTY+GY ASGG GVGVAV
Sbjct 190 VVLLGQSGGLYNHYFDTFLNPIDLLWSFLQAILMAITILLIHTYFGYFASGGPSGVGVAV 249
Query 248 GQAVRTSLIVVVVITLFISLAVYGASGNFNLSG 280
G AVRTSLIVVV +TL +SLAVYG++GNFNLSG
Sbjct 250 GNAVRTSLIVVVSVTLLVSLAVYGSNGNFNLSG 282
>gi|120405105|ref|YP_954934.1| hypothetical protein Mvan_4151 [Mycobacterium vanbaalenii PYR-1]
gi|119957923|gb|ABM14928.1| protein of unknown function DUF140 [Mycobacterium vanbaalenii
PYR-1]
Length=285
Score = 337 bits (864), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 178/276 (65%), Positives = 223/276 (81%), Gaps = 3/276 (1%)
Query 8 RFRRFFSRLQRPV---DNFGEQALFYGETMRYVPNAITRYRKETVRLVAEMTLGAGALVM 64
RF R L RPV G+ LFYG + VP+A +RKE VRL+AE+++GAG L M
Sbjct 10 RFPRLVDHLGRPVALLSRLGDHVLFYGRAIGGVPHAAVHFRKEIVRLIAEISMGAGTLAM 69
Query 65 IGGTVGVAAFLTLASGGVIAVQGYSSLGDIGIEALTGFLSAFLNVRVVAPVIAGIALAAT 124
IGGTV + FLTLA+GG +A+QGYSSLG+IGIEALTGFL+AF+NVR+ APV+AGI LAAT
Sbjct 70 IGGTVVIVGFLTLAAGGTLAIQGYSSLGNIGIEALTGFLAAFINVRIAAPVVAGIGLAAT 129
Query 125 IGAGATAQLGAMRVSEEIDAVECMAVHSVSYLVSTRLIAGLVAIIPLYSLSVLAAFFAAR 184
GAG TAQLGAMR++EEIDA+E M + V YLVSTR++AG+VAI PLYS++V+ +F A++
Sbjct 130 FGAGVTAQLGAMRINEEIDALESMGIRPVEYLVSTRIVAGMVAIAPLYSIAVILSFVASQ 189
Query 185 FTTVFVNGQSAGLYDHYFNTFLIPSDLLWSFMQAIAMSIAVMLVHTYYGYNASGGSVGVG 244
FTTV + GQS GLYDHYF+TFL P DLLWSF+QA+ M+IA++LVHTY+GY ASGG GVG
Sbjct 190 FTTVVLFGQSGGLYDHYFDTFLNPIDLLWSFLQAVLMAIAILLVHTYFGYFASGGPSGVG 249
Query 245 VAVGQAVRTSLIVVVVITLFISLAVYGASGNFNLSG 280
AVG AVRTSL+VVV +TL +SL++YG++GNFNLSG
Sbjct 250 AAVGNAVRTSLVVVVSVTLLVSLSIYGSNGNFNLSG 285
>gi|145223094|ref|YP_001133772.1| hypothetical protein Mflv_2507 [Mycobacterium gilvum PYR-GCK]
gi|145215580|gb|ABP44984.1| protein of unknown function DUF140 [Mycobacterium gilvum PYR-GCK]
Length=285
Score = 336 bits (861), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 180/285 (64%), Positives = 225/285 (79%), Gaps = 5/285 (1%)
Query 1 MSYDVTIRFR--RFFSRLQRPV---DNFGEQALFYGETMRYVPNAITRYRKETVRLVAEM 55
M IR R R L RPV G+ LFYG + VP+A +RKE +RL+AE+
Sbjct 1 MGTSTVIRSRSPRLVGNLGRPVAVLGRLGDHVLFYGRAVAGVPHAAVHFRKEIIRLIAEI 60
Query 56 TLGAGALVMIGGTVGVAAFLTLASGGVIAVQGYSSLGDIGIEALTGFLSAFLNVRVVAPV 115
++GAG L MIGGTV + FLTLA+GG +A+QGYSSLGDIGIEALTGFL+AF+NVR+ APV
Sbjct 61 SMGAGTLAMIGGTVVIVGFLTLAAGGTLAIQGYSSLGDIGIEALTGFLAAFINVRIAAPV 120
Query 116 IAGIALAATIGAGATAQLGAMRVSEEIDAVECMAVHSVSYLVSTRLIAGLVAIIPLYSLS 175
+AGI LAAT GAG TAQLGAMR++EEIDA+E M + V YLVSTR++AG+VAI PLYS++
Sbjct 121 VAGIGLAATFGAGVTAQLGAMRINEEIDALESMGIRPVEYLVSTRIVAGMVAITPLYSIA 180
Query 176 VLAAFFAARFTTVFVNGQSAGLYDHYFNTFLIPSDLLWSFMQAIAMSIAVMLVHTYYGYN 235
V+ +F A++FTTV + GQS GLYDHYF+TFL P DLLWSF+QA+ M+IA++LVHTY+GY
Sbjct 181 VILSFIASQFTTVVLFGQSGGLYDHYFDTFLNPIDLLWSFLQAVLMAIAILLVHTYFGYF 240
Query 236 ASGGSVGVGVAVGQAVRTSLIVVVVITLFISLAVYGASGNFNLSG 280
ASGG GVG AVG AVRTSL+VVV +TL +SL++YG++GNFNLSG
Sbjct 241 ASGGPSGVGAAVGNAVRTSLVVVVSVTLLVSLSIYGSNGNFNLSG 285
>gi|183984679|ref|YP_001852970.1| hypothetical protein MMAR_4711 [Mycobacterium marinum M]
gi|183178005|gb|ACC43115.1| conserved hypothetical membrane protein [Mycobacterium marinum
M]
Length=281
Score = 335 bits (860), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 173/275 (63%), Positives = 223/275 (82%), Gaps = 3/275 (1%)
Query 9 FRRFFSRLQRPV---DNFGEQALFYGETMRYVPNAITRYRKETVRLVAEMTLGAGALVMI 65
+ R +L++PV G+ LFYG+ + P A T YR+E +RLVAE+++GAG L MI
Sbjct 7 YPRMTRQLEKPVGTLSRIGDHTLFYGKAIAGAPFAATHYRREIIRLVAEISMGAGTLAMI 66
Query 66 GGTVGVAAFLTLASGGVIAVQGYSSLGDIGIEALTGFLSAFLNVRVVAPVIAGIALAATI 125
GGT+ + FLTLA+GG +AVQGYSSLG+IGIEALTGFL+AF+NVR+ AP++AGI LAAT
Sbjct 67 GGTLVIVGFLTLAAGGTLAVQGYSSLGNIGIEALTGFLAAFINVRIAAPIVAGIGLAATF 126
Query 126 GAGATAQLGAMRVSEEIDAVECMAVHSVSYLVSTRLIAGLVAIIPLYSLSVLAAFFAARF 185
GAG TAQLGAMR++EEIDA+E MA+ VSYLVSTR++AG++AI PLYS++V+ +F A++F
Sbjct 127 GAGVTAQLGAMRINEEIDALESMAIRPVSYLVSTRIVAGMMAITPLYSIAVILSFLASQF 186
Query 186 TTVFVNGQSAGLYDHYFNTFLIPSDLLWSFMQAIAMSIAVMLVHTYYGYNASGGSVGVGV 245
TTV + GQS GLY HYF TFL P DLLWSF+QA+ M+I ++L+HTY+GY ASGG GVGV
Sbjct 187 TTVILFGQSGGLYQHYFTTFLNPIDLLWSFLQAVLMAITILLIHTYFGYFASGGPAGVGV 246
Query 246 AVGQAVRTSLIVVVVITLFISLAVYGASGNFNLSG 280
A G AVRTSLIVVV +TL +SL+VYG++GNF+LSG
Sbjct 247 ATGNAVRTSLIVVVSVTLLVSLSVYGSNGNFHLSG 281
>gi|333989351|ref|YP_004521965.1| hypothetical protein JDM601_0711 [Mycobacterium sp. JDM601]
gi|333485319|gb|AEF34711.1| integral membrane protein YrbE4b [Mycobacterium sp. JDM601]
Length=284
Score = 335 bits (859), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 176/269 (66%), Positives = 222/269 (83%), Gaps = 3/269 (1%)
Query 15 RLQRPV---DNFGEQALFYGETMRYVPNAITRYRKETVRLVAEMTLGAGALVMIGGTVGV 71
+++RP+ G+ LFYG + P A T YR+E VRL+AE+++G G L MIGGTV +
Sbjct 16 QVRRPIAALSRLGDHTLFYGRAIATAPFAFTHYRREVVRLIAEISMGTGTLAMIGGTVVI 75
Query 72 AAFLTLASGGVIAVQGYSSLGDIGIEALTGFLSAFLNVRVVAPVIAGIALAATIGAGATA 131
FLTLA+GG +AVQGYSSLG+IGIEALTGFL+AF+NVR+ APV+AGI LAAT GAG TA
Sbjct 76 VGFLTLAAGGTLAVQGYSSLGNIGIEALTGFLAAFINVRISAPVVAGIGLAATFGAGVTA 135
Query 132 QLGAMRVSEEIDAVECMAVHSVSYLVSTRLIAGLVAIIPLYSLSVLAAFFAARFTTVFVN 191
QLGAMR++EEIDA+E MA+ ++YLVSTR++AGLVAI PLYS++V+ +F A+RFTTVF+
Sbjct 136 QLGAMRINEEIDALESMAIRPIAYLVSTRIVAGLVAITPLYSIAVILSFIASRFTTVFLF 195
Query 192 GQSAGLYDHYFNTFLIPSDLLWSFMQAIAMSIAVMLVHTYYGYNASGGSVGVGVAVGQAV 251
GQSAGLYDHYF TFL P DLLWSF+QA M++ ++L+HTY+GY A+GG GVGVAVG AV
Sbjct 196 GQSAGLYDHYFRTFLNPIDLLWSFLQAFLMAVTILLIHTYFGYFAAGGPAGVGVAVGNAV 255
Query 252 RTSLIVVVVITLFISLAVYGASGNFNLSG 280
RTSL+VVV +TL +SL+VYGASGNFNL+G
Sbjct 256 RTSLVVVVSVTLLVSLSVYGASGNFNLAG 284
>gi|296169578|ref|ZP_06851198.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Mycobacterium parascrofulaceum ATCC BAA-614]
gi|295895844|gb|EFG75539.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Mycobacterium parascrofulaceum ATCC BAA-614]
Length=287
Score = 335 bits (858), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 171/281 (61%), Positives = 227/281 (81%), Gaps = 5/281 (1%)
Query 5 VTIR--FRRFFSRLQRPVDNFG---EQALFYGETMRYVPNAITRYRKETVRLVAEMTLGA 59
+T+R + R ++++PV G + LFYG+ + VP A+ YR+E +RL+AE+++GA
Sbjct 7 MTLRAAYPRLTRQIEKPVGTLGRIGDHTLFYGKALAGVPFAVRHYRREVIRLIAEISMGA 66
Query 60 GALVMIGGTVGVAAFLTLASGGVIAVQGYSSLGDIGIEALTGFLSAFLNVRVVAPVIAGI 119
G L MIGGT+ + FLTLA+GG +AVQGYSSLG+IGIEALTGFL+AF+NVR+ AP++AGI
Sbjct 67 GTLAMIGGTLVIVGFLTLAAGGTLAVQGYSSLGNIGIEALTGFLAAFINVRIAAPIVAGI 126
Query 120 ALAATIGAGATAQLGAMRVSEEIDAVECMAVHSVSYLVSTRLIAGLVAIIPLYSLSVLAA 179
LAAT GAG TAQLGAMR++EEIDA+E MA+ +SYLVSTR+ AG++AI PLYS++V+ +
Sbjct 127 GLAATFGAGVTAQLGAMRINEEIDALESMAIRPISYLVSTRIAAGMMAITPLYSIAVILS 186
Query 180 FFAARFTTVFVNGQSAGLYDHYFNTFLIPSDLLWSFMQAIAMSIAVMLVHTYYGYNASGG 239
F A++FTTV + GQS GLY HYF TFL P DLLWSF+QA+ M+I ++L+HTY+GY ASGG
Sbjct 187 FLASQFTTVVLFGQSGGLYQHYFTTFLNPIDLLWSFLQAVLMAITILLIHTYFGYFASGG 246
Query 240 SVGVGVAVGQAVRTSLIVVVVITLFISLAVYGASGNFNLSG 280
GVGVA G AVRTSLIVVV +TL +SL++YG++GNF+LSG
Sbjct 247 PAGVGVATGNAVRTSLIVVVSVTLLVSLSIYGSNGNFHLSG 287
>gi|120405065|ref|YP_954894.1| hypothetical protein Mvan_4111 [Mycobacterium vanbaalenii PYR-1]
gi|119957883|gb|ABM14888.1| protein of unknown function DUF140 [Mycobacterium vanbaalenii
PYR-1]
Length=281
Score = 332 bits (851), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 177/275 (65%), Positives = 222/275 (81%), Gaps = 3/275 (1%)
Query 9 FRRFFSRLQRPV---DNFGEQALFYGETMRYVPNAITRYRKETVRLVAEMTLGAGALVMI 65
+ R L+RP+ G+ ALFY VP A+ YR++ +RL+AE+++GAG L MI
Sbjct 7 YPRLVRELERPIVVLGRIGDMALFYARAAAGVPYALRFYRRDILRLIAEISMGAGTLAMI 66
Query 66 GGTVGVAAFLTLASGGVIAVQGYSSLGDIGIEALTGFLSAFLNVRVVAPVIAGIALAATI 125
GGT+ + FLTLA+GG +AVQGYSSLGDIGIEALTGFL+AF+NVR+ APV+AGI LAAT
Sbjct 67 GGTLVIVGFLTLATGGTLAVQGYSSLGDIGIEALTGFLAAFINVRISAPVVAGIGLAATF 126
Query 126 GAGATAQLGAMRVSEEIDAVECMAVHSVSYLVSTRLIAGLVAIIPLYSLSVLAAFFAARF 185
GAG TAQLGAMR +EEIDA+E MA+ +S+LVSTRLIAG+VAI PLYS++V+ +F A+R+
Sbjct 127 GAGVTAQLGAMRTNEEIDALEAMAIRPISFLVSTRLIAGMVAITPLYSVAVILSFLASRY 186
Query 186 TTVFVNGQSAGLYDHYFNTFLIPSDLLWSFMQAIAMSIAVMLVHTYYGYNASGGSVGVGV 245
TTV + GQSAGLYDHYF TFL P DLLWSF QA+ M++A++L+HTY+GYNA+GG GVGV
Sbjct 187 TTVVLLGQSAGLYDHYFATFLSPIDLLWSFAQAVLMAVAILLIHTYFGYNATGGPAGVGV 246
Query 246 AVGQAVRTSLIVVVVITLFISLAVYGASGNFNLSG 280
A G AVRTSL+VVV +TL +SLAVYGA GNFNL+G
Sbjct 247 ATGDAVRTSLVVVVSVTLIVSLAVYGAGGNFNLAG 281
>gi|343926110|ref|ZP_08765622.1| putative YrbE family protein [Gordonia alkanivorans NBRC 16433]
gi|343764036|dbj|GAA12548.1| putative YrbE family protein [Gordonia alkanivorans NBRC 16433]
Length=268
Score = 328 bits (840), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 188/267 (71%), Positives = 225/267 (85%), Gaps = 0/267 (0%)
Query 14 SRLQRPVDNFGEQALFYGETMRYVPNAITRYRKETVRLVAEMTLGAGALVMIGGTVGVAA 73
R D G+QALFY +++ +P AI Y+KET+RL+AE+++G GAL MIGGTV V
Sbjct 2 KRAGEDWDQIGDQALFYWDSVVSIPRAIKHYKKETLRLIAEISMGTGALAMIGGTVVVVG 61
Query 74 FLTLASGGVIAVQGYSSLGDIGIEALTGFLSAFLNVRVVAPVIAGIALAATIGAGATAQL 133
FLTL +GG IAVQGYSSL +IG+EALTGF SAF+NVR+ PVI+GIALAATIGAGATAQL
Sbjct 62 FLTLFTGGTIAVQGYSSLANIGVEALTGFFSAFINVRIAVPVISGIALAATIGAGATAQL 121
Query 134 GAMRVSEEIDAVECMAVHSVSYLVSTRLIAGLVAIIPLYSLSVLAAFFAARFTTVFVNGQ 193
GAMRVSEEIDA+E MA+ S+ YLVSTR+IAGL+AIIPLY+L+ LA+F A+R TVF+ GQ
Sbjct 122 GAMRVSEEIDALETMAISSIPYLVSTRIIAGLIAIIPLYALASLASFLASRSATVFLYGQ 181
Query 194 SAGLYDHYFNTFLIPSDLLWSFMQAIAMSIAVMLVHTYYGYNASGGSVGVGVAVGQAVRT 253
S G+YDHYF+TFLIPSD+LWSF+QAI M++AVML+HTYYGYNASGG VGVGVAVG AVR
Sbjct 182 SPGVYDHYFDTFLIPSDILWSFVQAICMAVAVMLIHTYYGYNASGGPVGVGVAVGNAVRA 241
Query 254 SLIVVVVITLFISLAVYGASGNFNLSG 280
SL+VVVVITL SLA+YGA G FNL+G
Sbjct 242 SLVVVVVITLLTSLAIYGADGKFNLAG 268
>gi|240170398|ref|ZP_04749057.1| hypothetical protein MkanA1_13890 [Mycobacterium kansasii ATCC
12478]
Length=281
Score = 328 bits (840), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 173/281 (62%), Positives = 226/281 (81%), Gaps = 5/281 (1%)
Query 5 VTIR--FRRFFSRLQRPV---DNFGEQALFYGETMRYVPNAITRYRKETVRLVAEMTLGA 59
+T+R + R +LQ+PV G+ LFYG+ + P A T YR+E VRLVAE+++GA
Sbjct 1 MTLRAAYPRLTRQLQKPVGTLSRIGDHTLFYGKALAGAPFAATHYRREIVRLVAEISMGA 60
Query 60 GALVMIGGTVGVAAFLTLASGGVIAVQGYSSLGDIGIEALTGFLSAFLNVRVVAPVIAGI 119
G L MIGGT+ + FLTLA+GG +AVQGYSSLG+IGIEALTGFL+AF+NVR+ APV+AGI
Sbjct 61 GTLAMIGGTLVIVGFLTLAAGGTLAVQGYSSLGNIGIEALTGFLAAFINVRISAPVVAGI 120
Query 120 ALAATIGAGATAQLGAMRVSEEIDAVECMAVHSVSYLVSTRLIAGLVAIIPLYSLSVLAA 179
LAAT GAG TAQLGAMR++EEIDA+E MA+ +SYLVSTR++AG++AI PLYS++V+ +
Sbjct 121 GLAATFGAGVTAQLGAMRINEEIDALESMAIRPISYLVSTRIVAGMLAITPLYSIAVILS 180
Query 180 FFAARFTTVFVNGQSAGLYDHYFNTFLIPSDLLWSFMQAIAMSIAVMLVHTYYGYNASGG 239
F A++F TV + GQS GLY HYF TFL P DLLWSF+QA+ M++ ++L+HTY+GY ASGG
Sbjct 181 FLASQFVTVVLFGQSGGLYQHYFTTFLNPIDLLWSFLQAVLMALTILLIHTYFGYFASGG 240
Query 240 SVGVGVAVGQAVRTSLIVVVVITLFISLAVYGASGNFNLSG 280
GVGVA G AVRTSL+VVV +TL +SL++YG++GNF+LSG
Sbjct 241 PAGVGVATGNAVRTSLVVVVSVTLLVSLSIYGSNGNFHLSG 281
>gi|120405557|ref|YP_955386.1| hypothetical protein Mvan_4605 [Mycobacterium vanbaalenii PYR-1]
gi|119958375|gb|ABM15380.1| protein of unknown function DUF140 [Mycobacterium vanbaalenii
PYR-1]
Length=284
Score = 327 bits (839), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 158/268 (59%), Positives = 207/268 (78%), Gaps = 0/268 (0%)
Query 13 FSRLQRPVDNFGEQALFYGETMRYVPNAITRYRKETVRLVAEMTLGAGALVMIGGTVGVA 72
F+R+ P ++ G Q FYG T+R V T Y E +R++A+M LGAGAL++IGGTV +
Sbjct 17 FARVADPWNHIGTQTKFYGRTLRSVGYVFTHYGVELIRIIAQMGLGAGALIVIGGTVAIV 76
Query 73 AFLTLASGGVIAVQGYSSLGDIGIEALTGFLSAFLNVRVVAPVIAGIALAATIGAGATAQ 132
FLT+ +G ++AVQGYS ++G+EALTGF+SA+ NVR++AP IAL+ATIGAGATAQ
Sbjct 77 GFLTVTTGALVAVQGYSDFSELGVEALTGFVSAYFNVRLIAPATTAIALSATIGAGATAQ 136
Query 133 LGAMRVSEEIDAVECMAVHSVSYLVSTRLIAGLVAIIPLYSLSVLAAFFAARFTTVFVNG 192
LGAMR++EEIDA+E M + S+++L S+R+IAG + +IPLY + VL AF+AARF T + G
Sbjct 137 LGAMRINEEIDALEVMGIRSIAFLASSRVIAGFLVVIPLYCVGVLMAFWAARFGTTVIYG 196
Query 193 QSAGLYDHYFNTFLIPSDLLWSFMQAIAMSIAVMLVHTYYGYNASGGSVGVGVAVGQAVR 252
QS G+YDHYF TFL P+DL+WSF Q IA+S+ +MLVHTYYGY A GG GVG AVG+AVR
Sbjct 197 QSTGVYDHYFKTFLNPTDLMWSFGQCIALSVIIMLVHTYYGYTARGGPAGVGEAVGRAVR 256
Query 253 TSLIVVVVITLFISLAVYGASGNFNLSG 280
TSLIV + + +SLAVYG SGNFNL+G
Sbjct 257 TSLIVSAFVLVMLSLAVYGQSGNFNLAG 284
Lambda K H
0.326 0.139 0.392
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 442782057568
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40