BLASTP 2.2.25+


Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.



Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
           15,229,318 sequences; 5,219,829,388 total letters



Query= Rv3505

Length=373
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

gi|15610641|ref|NP_218022.1|  acyl-CoA dehydrogenase FADE27 [Myco...   734    0.0   
gi|31794681|ref|NP_857174.1|  acyl-CoA dehydrogenase FADE27 [Myco...   734    0.0   
gi|340628473|ref|YP_004746925.1|  putative acyl-CoA dehydrogenase...   717    0.0   
gi|289763685|ref|ZP_06523063.1|  acyl-CoA dehydrogenase fadE27 [M...   701    0.0   
gi|183984961|ref|YP_001853252.1|  acyl-CoA dehydrogenase FadE27 [...   617    8e-175
gi|118619258|ref|YP_907590.1|  acyl-CoA dehydrogenase FadE27 [Myc...   610    8e-173
gi|118462522|ref|YP_879931.1|  acyl-CoA dehydrogenase [Mycobacter...   597    1e-168
gi|254773607|ref|ZP_05215123.1|  putative acyl-CoA dehydrogenase ...   596    2e-168
gi|336458444|gb|EGO37418.1|  acyl-CoA dehydrogenase [Mycobacteriu...   593    2e-167
gi|254822741|ref|ZP_05227742.1|  putative acyl-CoA dehydrogenase ...   578    5e-163
gi|296166539|ref|ZP_06848970.1|  probable acyl-CoA dehydrogenase ...   578    7e-163
gi|240170061|ref|ZP_04748720.1|  acyl-CoA dehydrogenase FadE27 [M...   575    5e-162
gi|342862244|ref|ZP_08718886.1|  acyl-CoA dehydrogenase [Mycobact...   566    2e-159
gi|108801586|ref|YP_641783.1|  acyl-CoA dehydrogenase-like protei...   545    7e-153
gi|333992276|ref|YP_004524890.1|  acyl-CoA dehydrogenase [Mycobac...   544    1e-152
gi|298526985|ref|ZP_07014394.1|  conserved hypothetical protein [...   523    2e-146
gi|126437570|ref|YP_001073261.1|  acyl-CoA dehydrogenase domain-c...   513    2e-143
gi|120406155|ref|YP_955984.1|  acyl-CoA dehydrogenase domain-cont...   508    8e-142
gi|118468383|ref|YP_890133.1|  acyl-CoA dehydrogenase [Mycobacter...   506    2e-141
gi|145222142|ref|YP_001132820.1|  acyl-CoA dehydrogenase domain-c...   504    7e-141
gi|315442581|ref|YP_004075460.1|  acyl-CoA dehydrogenase [Mycobac...   499    4e-139
gi|41406656|ref|NP_959492.1|  hypothetical protein MAP0558c [Myco...   475    6e-132
gi|169631237|ref|YP_001704886.1|  acyl-CoA dehydrogenase [Mycobac...   442    6e-122
gi|289752226|ref|ZP_06511604.1|  acyl-CoA dehydrogenase fadE27 [M...   407    1e-111
gi|325674891|ref|ZP_08154578.1|  acyl-CoA dehydrogenase [Rhodococ...   395    7e-108
gi|111021664|ref|YP_704636.1|  acyl-CoA dehydrogenase [Rhodococcu...   385    5e-105
gi|312138204|ref|YP_004005540.1|  acyl-CoA dehydrogenase [Rhodoco...   380    2e-103
gi|226364201|ref|YP_002781983.1|  acyl-CoA dehydrogenase [Rhodoco...   380    3e-103
gi|229494541|ref|ZP_04388304.1|  acyl-CoA dehydrogenase [Rhodococ...   371    1e-100
gi|226304443|ref|YP_002764401.1|  acyl-CoA dehydrogenase [Rhodoco...   369    5e-100
gi|310752620|gb|ADP09631.1|  FadE27 [Rhodococcus rhodochrous]          349    3e-94 
gi|289445103|ref|ZP_06434847.1|  acyl-CoA dehydrogenase fadE27 [M...   337    2e-90 
gi|289445102|ref|ZP_06434846.1|  acyl-CoA dehydrogenase fadE27 [M...   316    4e-84 
gi|145595135|ref|YP_001159432.1|  acyl-CoA dehydrogenase domain-c...   312    4e-83 
gi|333918684|ref|YP_004492265.1|  acyl-CoA dehydrogenase domain-c...   308    1e-81 
gi|159038382|ref|YP_001537635.1|  acyl-CoA dehydrogenase domain-c...   298    8e-79 
gi|54022498|ref|YP_116740.1|  putative acyl-CoA dehydrogenase [No...   290    2e-76 
gi|343926115|ref|ZP_08765627.1|  putative acyl-CoA dehydrogenase ...   276    3e-72 
gi|119716742|ref|YP_923707.1|  acyl-CoA dehydrogenase domain-cont...   275    1e-71 
gi|312195242|ref|YP_004015303.1|  acyl-CoA dehydrogenase domain-c...   272    6e-71 
gi|296141481|ref|YP_003648724.1|  acyl-CoA dehydrogenase domain-c...   267    2e-69 
gi|262203815|ref|YP_003275023.1|  acyl-CoA dehydrogenase domain-c...   265    8e-69 
gi|302525555|ref|ZP_07277897.1|  pimeloyl-CoA dehydrogenase, smal...   256    3e-66 
gi|326383103|ref|ZP_08204792.1|  acyl-CoA dehydrogenase domain-co...   246    5e-63 
gi|311744219|ref|ZP_07718023.1|  acyl-CoA dehydrogenase [Aeromicr...   246    5e-63 
gi|300784328|ref|YP_003764619.1|  acyl-CoA dehydrogenase [Amycola...   245    7e-63 
gi|254822253|ref|ZP_05227254.1|  hypothetical protein MintA_20129...   236    6e-60 
gi|254774653|ref|ZP_05216169.1|  hypothetical protein MaviaA2_082...   234    1e-59 
gi|342857582|ref|ZP_08714238.1|  hypothetical protein MCOL_01860 ...   232    7e-59 
gi|296170096|ref|ZP_06851696.1|  acyl-CoA dehydrogenase domain pr...   228    9e-58 


>gi|15610641|ref|NP_218022.1| acyl-CoA dehydrogenase FADE27 [Mycobacterium tuberculosis H37Rv]
 gi|15843117|ref|NP_338154.1| acyl-CoA dehydrogenase, putative [Mycobacterium tuberculosis 
CDC1551]
 gi|148663369|ref|YP_001284892.1| acyl-CoA dehydrogenase FadE27 [Mycobacterium tuberculosis H37Ra]
 60 more sequence titles
 Length=373

 Score =  734 bits (1896),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 373/373 (100%), Positives = 373/373 (100%), Gaps = 0/373 (0%)

Query  1    MDFTTTEAAQDLGGLVDTIVDAVCTPEHQRELDKLEQRFDRELWRKLIDAGILSSAAPES  60
            MDFTTTEAAQDLGGLVDTIVDAVCTPEHQRELDKLEQRFDRELWRKLIDAGILSSAAPES
Sbjct  1    MDFTTTEAAQDLGGLVDTIVDAVCTPEHQRELDKLEQRFDRELWRKLIDAGILSSAAPES  60

Query  61   LGGDGFGVLEQVAVLVALGHQLAAVPYLESVVLAAGALARFGSPELQQGWGVSAVSGDRI  120
            LGGDGFGVLEQVAVLVALGHQLAAVPYLESVVLAAGALARFGSPELQQGWGVSAVSGDRI
Sbjct  61   LGGDGFGVLEQVAVLVALGHQLAAVPYLESVVLAAGALARFGSPELQQGWGVSAVSGDRI  120

Query  121  LTVALDGEMGEGPVQAAGTGHGYRLTGTRTQVGYGPVADAFLVPAETDSGAAVFLVAAGD  180
            LTVALDGEMGEGPVQAAGTGHGYRLTGTRTQVGYGPVADAFLVPAETDSGAAVFLVAAGD
Sbjct  121  LTVALDGEMGEGPVQAAGTGHGYRLTGTRTQVGYGPVADAFLVPAETDSGAAVFLVAAGD  180

Query  181  PGVAVTALATTGLGSVGHLELNGAKVDAARRVGGTDVAVWLGTLSTLSRTAFQLGVLERG  240
            PGVAVTALATTGLGSVGHLELNGAKVDAARRVGGTDVAVWLGTLSTLSRTAFQLGVLERG
Sbjct  181  PGVAVTALATTGLGSVGHLELNGAKVDAARRVGGTDVAVWLGTLSTLSRTAFQLGVLERG  240

Query  241  LQMTAEYARTREQFDRPIGSFQAVGQRLADGYIDVKGLRLTLTQAAWRVAEDSLASRECP  300
            LQMTAEYARTREQFDRPIGSFQAVGQRLADGYIDVKGLRLTLTQAAWRVAEDSLASRECP
Sbjct  241  LQMTAEYARTREQFDRPIGSFQAVGQRLADGYIDVKGLRLTLTQAAWRVAEDSLASRECP  300

Query  301  QPADIDVATAGFWAAEAGHRVAHTIVHVHGGVGVDTDHPVHRYFLAAKQTEFALGGATGQ  360
            QPADIDVATAGFWAAEAGHRVAHTIVHVHGGVGVDTDHPVHRYFLAAKQTEFALGGATGQ
Sbjct  301  QPADIDVATAGFWAAEAGHRVAHTIVHVHGGVGVDTDHPVHRYFLAAKQTEFALGGATGQ  360

Query  361  LRRIGRELAETPA  373
            LRRIGRELAETPA
Sbjct  361  LRRIGRELAETPA  373


>gi|31794681|ref|NP_857174.1| acyl-CoA dehydrogenase FADE27 [Mycobacterium bovis AF2122/97]
 gi|121639424|ref|YP_979648.1| putative acyl-CoA dehydrogenase fadE27 [Mycobacterium bovis BCG 
str. Pasteur 1173P2]
 gi|224991920|ref|YP_002646609.1| putative acyl-CoA dehydrogenase [Mycobacterium bovis BCG str. 
Tokyo 172]
 gi|31620278|emb|CAD95721.1| PROBABLE ACYL-COA DEHYDROGENASE FADE27 [Mycobacterium bovis AF2122/97]
 gi|121495072|emb|CAL73558.1| Probable acyl-CoA dehydrogenase fadE27 [Mycobacterium bovis BCG 
str. Pasteur 1173P2]
 gi|224775035|dbj|BAH27841.1| putative acyl-CoA dehydrogenase [Mycobacterium bovis BCG str. 
Tokyo 172]
 gi|341603445|emb|CCC66126.1| probable acyl-CoA dehydrogenase fadE27 [Mycobacterium bovis BCG 
str. Moreau RDJ]
Length=373

 Score =  734 bits (1894),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 372/373 (99%), Positives = 372/373 (99%), Gaps = 0/373 (0%)

Query  1    MDFTTTEAAQDLGGLVDTIVDAVCTPEHQRELDKLEQRFDRELWRKLIDAGILSSAAPES  60
            MDFTTTEAAQDLGGLVDTIVDAVCTPEHQRELDKLEQRFDRELWRKLIDAGILSSAAPES
Sbjct  1    MDFTTTEAAQDLGGLVDTIVDAVCTPEHQRELDKLEQRFDRELWRKLIDAGILSSAAPES  60

Query  61   LGGDGFGVLEQVAVLVALGHQLAAVPYLESVVLAAGALARFGSPELQQGWGVSAVSGDRI  120
            LGGDGFGVLEQVAVLVALGHQLAAVPYLESVVLAAGALARFGSPELQQGWGVSAVSGDRI
Sbjct  61   LGGDGFGVLEQVAVLVALGHQLAAVPYLESVVLAAGALARFGSPELQQGWGVSAVSGDRI  120

Query  121  LTVALDGEMGEGPVQAAGTGHGYRLTGTRTQVGYGPVADAFLVPAETDSGAAVFLVAAGD  180
            LTVALDGEMGEGPVQAAGTGHGYRLTGTRTQVGYGPVADAFLVPAETDSGAAVFLVAAGD
Sbjct  121  LTVALDGEMGEGPVQAAGTGHGYRLTGTRTQVGYGPVADAFLVPAETDSGAAVFLVAAGD  180

Query  181  PGVAVTALATTGLGSVGHLELNGAKVDAARRVGGTDVAVWLGTLSTLSRTAFQLGVLERG  240
            PGVAVTALATTGLGSVGHLELNGAKVDAARRVGGTDV VWLGTLSTLSRTAFQLGVLERG
Sbjct  181  PGVAVTALATTGLGSVGHLELNGAKVDAARRVGGTDVVVWLGTLSTLSRTAFQLGVLERG  240

Query  241  LQMTAEYARTREQFDRPIGSFQAVGQRLADGYIDVKGLRLTLTQAAWRVAEDSLASRECP  300
            LQMTAEYARTREQFDRPIGSFQAVGQRLADGYIDVKGLRLTLTQAAWRVAEDSLASRECP
Sbjct  241  LQMTAEYARTREQFDRPIGSFQAVGQRLADGYIDVKGLRLTLTQAAWRVAEDSLASRECP  300

Query  301  QPADIDVATAGFWAAEAGHRVAHTIVHVHGGVGVDTDHPVHRYFLAAKQTEFALGGATGQ  360
            QPADIDVATAGFWAAEAGHRVAHTIVHVHGGVGVDTDHPVHRYFLAAKQTEFALGGATGQ
Sbjct  301  QPADIDVATAGFWAAEAGHRVAHTIVHVHGGVGVDTDHPVHRYFLAAKQTEFALGGATGQ  360

Query  361  LRRIGRELAETPA  373
            LRRIGRELAETPA
Sbjct  361  LRRIGRELAETPA  373


>gi|340628473|ref|YP_004746925.1| putative acyl-CoA dehydrogenase FADE27 [Mycobacterium canettii 
CIPT 140010059]
 gi|340006663|emb|CCC45850.1| putative acyl-CoA dehydrogenase FADE27 [Mycobacterium canettii 
CIPT 140010059]
Length=373

 Score =  717 bits (1850),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 364/373 (98%), Positives = 366/373 (99%), Gaps = 0/373 (0%)

Query  1    MDFTTTEAAQDLGGLVDTIVDAVCTPEHQRELDKLEQRFDRELWRKLIDAGILSSAAPES  60
            MDFTTTEAAQDLGGLVDTIVDAVCTPEHQRELDKLEQRFDRELWRKLIDAGILSSAAPES
Sbjct  1    MDFTTTEAAQDLGGLVDTIVDAVCTPEHQRELDKLEQRFDRELWRKLIDAGILSSAAPES  60

Query  61   LGGDGFGVLEQVAVLVALGHQLAAVPYLESVVLAAGALARFGSPELQQGWGVSAVSGDRI  120
            LGGDGFGVLEQVAVLVALGHQLAAVPYLESVVLAAGAL RFGSPELQQGWGVSAVSG++I
Sbjct  61   LGGDGFGVLEQVAVLVALGHQLAAVPYLESVVLAAGALTRFGSPELQQGWGVSAVSGEKI  120

Query  121  LTVALDGEMGEGPVQAAGTGHGYRLTGTRTQVGYGPVADAFLVPAETDSGAAVFLVAAGD  180
            LTVALDGEMGEGPVQAA TG GYRLTGTRTQVGYGPVADAFLVPAETDSGAAVFLVAA D
Sbjct  121  LTVALDGEMGEGPVQAADTGDGYRLTGTRTQVGYGPVADAFLVPAETDSGAAVFLVAADD  180

Query  181  PGVAVTALATTGLGSVGHLELNGAKVDAARRVGGTDVAVWLGTLSTLSRTAFQLGVLERG  240
            PGVAVTALATTGLGSVGHLELN AKVD ARRVGGTDVAVWLGTLSTL RTAFQLGVLERG
Sbjct  181  PGVAVTALATTGLGSVGHLELNAAKVDTARRVGGTDVAVWLGTLSTLGRTAFQLGVLERG  240

Query  241  LQMTAEYARTREQFDRPIGSFQAVGQRLADGYIDVKGLRLTLTQAAWRVAEDSLASRECP  300
            LQMTAEYARTREQFDRPIGSFQAVGQRLADGYIDVKGLRLTLTQAAWRVAEDSLASRECP
Sbjct  241  LQMTAEYARTREQFDRPIGSFQAVGQRLADGYIDVKGLRLTLTQAAWRVAEDSLASRECP  300

Query  301  QPADIDVATAGFWAAEAGHRVAHTIVHVHGGVGVDTDHPVHRYFLAAKQTEFALGGATGQ  360
            QPADIDVATAGFWAAEAGHRVAHTIVHVHGGVGVDTDHPVHRYFLAAKQTEFALGGATGQ
Sbjct  301  QPADIDVATAGFWAAEAGHRVAHTIVHVHGGVGVDTDHPVHRYFLAAKQTEFALGGATGQ  360

Query  361  LRRIGRELAETPA  373
            LRRIGRELAETPA
Sbjct  361  LRRIGRELAETPA  373


>gi|289763685|ref|ZP_06523063.1| acyl-CoA dehydrogenase fadE27 [Mycobacterium tuberculosis GM 
1503]
 gi|289711191|gb|EFD75207.1| acyl-CoA dehydrogenase fadE27 [Mycobacterium tuberculosis GM 
1503]
Length=366

 Score =  701 bits (1808),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 355/355 (100%), Positives = 355/355 (100%), Gaps = 0/355 (0%)

Query  1    MDFTTTEAAQDLGGLVDTIVDAVCTPEHQRELDKLEQRFDRELWRKLIDAGILSSAAPES  60
            MDFTTTEAAQDLGGLVDTIVDAVCTPEHQRELDKLEQRFDRELWRKLIDAGILSSAAPES
Sbjct  1    MDFTTTEAAQDLGGLVDTIVDAVCTPEHQRELDKLEQRFDRELWRKLIDAGILSSAAPES  60

Query  61   LGGDGFGVLEQVAVLVALGHQLAAVPYLESVVLAAGALARFGSPELQQGWGVSAVSGDRI  120
            LGGDGFGVLEQVAVLVALGHQLAAVPYLESVVLAAGALARFGSPELQQGWGVSAVSGDRI
Sbjct  61   LGGDGFGVLEQVAVLVALGHQLAAVPYLESVVLAAGALARFGSPELQQGWGVSAVSGDRI  120

Query  121  LTVALDGEMGEGPVQAAGTGHGYRLTGTRTQVGYGPVADAFLVPAETDSGAAVFLVAAGD  180
            LTVALDGEMGEGPVQAAGTGHGYRLTGTRTQVGYGPVADAFLVPAETDSGAAVFLVAAGD
Sbjct  121  LTVALDGEMGEGPVQAAGTGHGYRLTGTRTQVGYGPVADAFLVPAETDSGAAVFLVAAGD  180

Query  181  PGVAVTALATTGLGSVGHLELNGAKVDAARRVGGTDVAVWLGTLSTLSRTAFQLGVLERG  240
            PGVAVTALATTGLGSVGHLELNGAKVDAARRVGGTDVAVWLGTLSTLSRTAFQLGVLERG
Sbjct  181  PGVAVTALATTGLGSVGHLELNGAKVDAARRVGGTDVAVWLGTLSTLSRTAFQLGVLERG  240

Query  241  LQMTAEYARTREQFDRPIGSFQAVGQRLADGYIDVKGLRLTLTQAAWRVAEDSLASRECP  300
            LQMTAEYARTREQFDRPIGSFQAVGQRLADGYIDVKGLRLTLTQAAWRVAEDSLASRECP
Sbjct  241  LQMTAEYARTREQFDRPIGSFQAVGQRLADGYIDVKGLRLTLTQAAWRVAEDSLASRECP  300

Query  301  QPADIDVATAGFWAAEAGHRVAHTIVHVHGGVGVDTDHPVHRYFLAAKQTEFALG  355
            QPADIDVATAGFWAAEAGHRVAHTIVHVHGGVGVDTDHPVHRYFLAAKQTEFALG
Sbjct  301  QPADIDVATAGFWAAEAGHRVAHTIVHVHGGVGVDTDHPVHRYFLAAKQTEFALG  355


>gi|183984961|ref|YP_001853252.1| acyl-CoA dehydrogenase FadE27 [Mycobacterium marinum M]
 gi|183178287|gb|ACC43397.1| acyl-CoA dehydrogenase FadE27 [Mycobacterium marinum M]
Length=365

 Score =  617 bits (1591),  Expect = 8e-175, Method: Compositional matrix adjust.
 Identities = 313/373 (84%), Positives = 338/373 (91%), Gaps = 8/373 (2%)

Query  1    MDFTTTEAAQDLGGLVDTIVDAVCTPEHQRELDKLEQRFDRELWRKLIDAGILSSAAPES  60
            MDF+TTEAAQDLGGLVDTIVDAVCTPEHQR+LD+LEQRFDRELWRKLID+ ILSSAA   
Sbjct  1    MDFSTTEAAQDLGGLVDTIVDAVCTPEHQRQLDRLEQRFDRELWRKLIDSDILSSAAATQ  60

Query  61   LGGDGFGVLEQVAVLVALGHQLAAVPYLESVVLAAGALARFGSPELQQGWGVSAVSGDRI  120
            +GGDGFGVLEQVA+LVALGHQLAAVPYLESVVLAAGALARFGS ELQQ WG +AV G++I
Sbjct  61   VGGDGFGVLEQVAILVALGHQLAAVPYLESVVLAAGALARFGSEELQQSWGAAAVGGEKI  120

Query  121  LTVALDGEMGEGPVQAAGTGHGYRLTGTRTQVGYGPVADAFLVPAETDSGAAVFLVAAGD  180
            L VALD EMGEGPVQAA +G G+RLTGTRTQVGYGPVADAFLVPAETDSG  VFLVAA D
Sbjct  121  LAVALDAEMGEGPVQAARSGAGFRLTGTRTQVGYGPVADAFLVPAETDSGTVVFLVAADD  180

Query  181  PGVAVTALATTGLGSVGHLELNGAKVDAARRVGGTDVAVWLGTLSTLSRTAFQLGVLERG  240
            PGV+VTAL TTGLGSVGHL L+G +VDAAR +GG+DV  WL T++TL R+AFQLGVLERG
Sbjct  181  PGVSVTALQTTGLGSVGHLALDGTEVDAARGIGGSDVTAWLRTINTLGRSAFQLGVLERG  240

Query  241  LQMTAEYARTREQFDRPIGSFQAVGQRLADGYIDVKGLRLTLTQAAWRVAEDSLASRECP  300
            L+MTAEYARTREQFDRPIGSFQAVGQRLADGYIDVKGLRLTLTQAAWRV+ED        
Sbjct  241  LRMTAEYARTREQFDRPIGSFQAVGQRLADGYIDVKGLRLTLTQAAWRVSED--------  292

Query  301  QPADIDVATAGFWAAEAGHRVAHTIVHVHGGVGVDTDHPVHRYFLAAKQTEFALGGATGQ  360
             PA+IDVA+AGFWAAEAGHRVAHTIVHVHGGVGVDTDHPVHRYFLAAK+ EFALGGAT  
Sbjct  293  LPAEIDVASAGFWAAEAGHRVAHTIVHVHGGVGVDTDHPVHRYFLAAKEAEFALGGATTA  352

Query  361  LRRIGRELAETPA  373
            LR+IGRELAETPA
Sbjct  353  LRQIGRELAETPA  365


>gi|118619258|ref|YP_907590.1| acyl-CoA dehydrogenase FadE27 [Mycobacterium ulcerans Agy99]
 gi|118571368|gb|ABL06119.1| acyl-CoA dehydrogenase FadE27 [Mycobacterium ulcerans Agy99]
Length=365

 Score =  610 bits (1574),  Expect = 8e-173, Method: Compositional matrix adjust.
 Identities = 312/373 (84%), Positives = 335/373 (90%), Gaps = 8/373 (2%)

Query  1    MDFTTTEAAQDLGGLVDTIVDAVCTPEHQRELDKLEQRFDRELWRKLIDAGILSSAAPES  60
            MDF+TTEAAQDLGGLV TIVDAVCTPEHQR+LD LEQRFDRELWRKLID+ ILSSAA   
Sbjct  1    MDFSTTEAAQDLGGLVATIVDAVCTPEHQRQLDGLEQRFDRELWRKLIDSDILSSAAATQ  60

Query  61   LGGDGFGVLEQVAVLVALGHQLAAVPYLESVVLAAGALARFGSPELQQGWGVSAVSGDRI  120
            +GGDGFGVLEQVA+LVALGHQLAAVPYLESVVLAAGALARFGS ELQQ WG +AV G++I
Sbjct  61   VGGDGFGVLEQVAILVALGHQLAAVPYLESVVLAAGALARFGSEELQQSWGAAAVGGEKI  120

Query  121  LTVALDGEMGEGPVQAAGTGHGYRLTGTRTQVGYGPVADAFLVPAETDSGAAVFLVAAGD  180
            L VALD EMGEGPVQAA +G G+RLTGTRTQVGYGPVADAFLVPAETDSG  VFLVAA D
Sbjct  121  LAVALDAEMGEGPVQAARSGAGFRLTGTRTQVGYGPVADAFLVPAETDSGTVVFLVAADD  180

Query  181  PGVAVTALATTGLGSVGHLELNGAKVDAARRVGGTDVAVWLGTLSTLSRTAFQLGVLERG  240
            PGV+VTAL TTGLGSVGHL L+G +VDAAR +GG+DV  WL T++TL R+AFQLGVLERG
Sbjct  181  PGVSVTALQTTGLGSVGHLALDGTEVDAARGIGGSDVTAWLRTINTLGRSAFQLGVLERG  240

Query  241  LQMTAEYARTREQFDRPIGSFQAVGQRLADGYIDVKGLRLTLTQAAWRVAEDSLASRECP  300
            LQMTAEYARTREQFDRPIGSFQAVGQRLADGYIDVKGLRLTLTQAAWRV+ED        
Sbjct  241  LQMTAEYARTREQFDRPIGSFQAVGQRLADGYIDVKGLRLTLTQAAWRVSED--------  292

Query  301  QPADIDVATAGFWAAEAGHRVAHTIVHVHGGVGVDTDHPVHRYFLAAKQTEFALGGATGQ  360
             PA+IDVA+AGF AAEAGHRVAHTIVHVHGGVGVDTDHPVHRYFLAAK+ EFALGGAT  
Sbjct  293  LPAEIDVASAGFCAAEAGHRVAHTIVHVHGGVGVDTDHPVHRYFLAAKEAEFALGGATTA  352

Query  361  LRRIGRELAETPA  373
            LR+IGRELAETPA
Sbjct  353  LRQIGRELAETPA  365


>gi|118462522|ref|YP_879931.1| acyl-CoA dehydrogenase [Mycobacterium avium 104]
 gi|118163809|gb|ABK64706.1| putative acyl-CoA dehydrogenase [Mycobacterium avium 104]
Length=365

 Score =  597 bits (1538),  Expect = 1e-168, Method: Compositional matrix adjust.
 Identities = 314/373 (85%), Positives = 332/373 (90%), Gaps = 8/373 (2%)

Query  1    MDFTTTEAAQDLGGLVDTIVDAVCTPEHQRELDKLEQRFDRELWRKLIDAGILSSAAPES  60
            MDFTTTEAA DLG LVDTIVD+VCTPEHQRELD L+QRFDR+LW KLIDAGILSSA+  S
Sbjct  1    MDFTTTEAAHDLGNLVDTIVDSVCTPEHQRELDGLDQRFDRDLWAKLIDAGILSSASATS  60

Query  61   LGGDGFGVLEQVAVLVALGHQLAAVPYLESVVLAAGALARFGSPELQQGWGVSAVSGDRI  120
            LGGDGFG LEQ+A+LVALGHQLAAVPYLESVVL AGALARFG+ ELQQGWGV AVSG++ 
Sbjct  61   LGGDGFGALEQIAILVALGHQLAAVPYLESVVLGAGALARFGTEELQQGWGVPAVSGEKT  120

Query  121  LTVALDGEMGEGPVQAAGTGHGYRLTGTRTQVGYGPVADAFLVPAETDSGAAVFLVAAGD  180
            LTVALD EMGEGPVQA   G GYRLTGTRTQVG+GPVADAFLVPAETDSG AVFLVAA D
Sbjct  121  LTVALDPEMGEGPVQAVSAGAGYRLTGTRTQVGFGPVADAFLVPAETDSGTAVFLVAADD  180

Query  181  PGVAVTALATTGLGSVGHLELNGAKVDAARRVGGTDVAVWLGTLSTLSRTAFQLGVLERG  240
            PGV VTAL TTGLGSVGHL L+G +VD  R+VGG +VA WLGTL TL R AFQLGVLERG
Sbjct  181  PGVTVTALETTGLGSVGHLALDGTQVDGTRQVGGAEVAAWLGTLGTLGRAAFQLGVLERG  240

Query  241  LQMTAEYARTREQFDRPIGSFQAVGQRLADGYIDVKGLRLTLTQAAWRVAEDSLASRECP  300
            LQMTAEYARTREQFDRPIGSFQAV QRLADGYIDVKGLRLTLTQAAWRV+ED        
Sbjct  241  LQMTAEYARTREQFDRPIGSFQAVSQRLADGYIDVKGLRLTLTQAAWRVSED--------  292

Query  301  QPADIDVATAGFWAAEAGHRVAHTIVHVHGGVGVDTDHPVHRYFLAAKQTEFALGGATGQ  360
             PA++DVATA FWAA+AGHRVAHTIVHVHGGVGVDTDHPVHRYFLAAKQ EFALGGATGQ
Sbjct  293  LPAEVDVATAAFWAADAGHRVAHTIVHVHGGVGVDTDHPVHRYFLAAKQAEFALGGATGQ  352

Query  361  LRRIGRELAETPA  373
            LRRIGRELAETPA
Sbjct  353  LRRIGRELAETPA  365


>gi|254773607|ref|ZP_05215123.1| putative acyl-CoA dehydrogenase [Mycobacterium avium subsp. avium 
ATCC 25291]
Length=365

 Score =  596 bits (1537),  Expect = 2e-168, Method: Compositional matrix adjust.
 Identities = 314/373 (85%), Positives = 332/373 (90%), Gaps = 8/373 (2%)

Query  1    MDFTTTEAAQDLGGLVDTIVDAVCTPEHQRELDKLEQRFDRELWRKLIDAGILSSAAPES  60
            MDFTTTEAA DLG LVDTIVD+VCTPEHQRELD L+QRFDR+LW KLIDAGILSSA+  S
Sbjct  1    MDFTTTEAAHDLGNLVDTIVDSVCTPEHQRELDGLDQRFDRDLWTKLIDAGILSSASATS  60

Query  61   LGGDGFGVLEQVAVLVALGHQLAAVPYLESVVLAAGALARFGSPELQQGWGVSAVSGDRI  120
            LGGDGFG LEQ+A+LVALGHQLAAVPYLESVVL AGALARFG+ ELQQGWGV AVSG++ 
Sbjct  61   LGGDGFGALEQIAILVALGHQLAAVPYLESVVLGAGALARFGTEELQQGWGVPAVSGEKT  120

Query  121  LTVALDGEMGEGPVQAAGTGHGYRLTGTRTQVGYGPVADAFLVPAETDSGAAVFLVAAGD  180
            LTVALD EMGEGPVQA   G GYRLTGTRTQVG+GPVADAFLVPAETDSG AVFLVAA D
Sbjct  121  LTVALDPEMGEGPVQAVSAGAGYRLTGTRTQVGFGPVADAFLVPAETDSGTAVFLVAADD  180

Query  181  PGVAVTALATTGLGSVGHLELNGAKVDAARRVGGTDVAVWLGTLSTLSRTAFQLGVLERG  240
            PGV VTAL TTGLGSVGHL L+G +VD  R+VGG +VA WLGTL TL R AFQLGVLERG
Sbjct  181  PGVTVTALETTGLGSVGHLALDGTQVDGTRQVGGAEVAAWLGTLGTLGRAAFQLGVLERG  240

Query  241  LQMTAEYARTREQFDRPIGSFQAVGQRLADGYIDVKGLRLTLTQAAWRVAEDSLASRECP  300
            LQMTAEYARTREQFDRPIGSFQAV QRLADGYIDVKGLRLTLTQAAWRV+ED        
Sbjct  241  LQMTAEYARTREQFDRPIGSFQAVSQRLADGYIDVKGLRLTLTQAAWRVSED--------  292

Query  301  QPADIDVATAGFWAAEAGHRVAHTIVHVHGGVGVDTDHPVHRYFLAAKQTEFALGGATGQ  360
             PA++DVATA FWAA+AGHRVAHTIVHVHGGVGVDTDHPVHRYFLAAKQ EFALGGATGQ
Sbjct  293  LPAEVDVATAAFWAADAGHRVAHTIVHVHGGVGVDTDHPVHRYFLAAKQAEFALGGATGQ  352

Query  361  LRRIGRELAETPA  373
            LRRIGRELAETPA
Sbjct  353  LRRIGRELAETPA  365


>gi|336458444|gb|EGO37418.1| acyl-CoA dehydrogenase [Mycobacterium avium subsp. paratuberculosis 
S397]
Length=365

 Score =  593 bits (1528),  Expect = 2e-167, Method: Compositional matrix adjust.
 Identities = 313/373 (84%), Positives = 331/373 (89%), Gaps = 8/373 (2%)

Query  1    MDFTTTEAAQDLGGLVDTIVDAVCTPEHQRELDKLEQRFDRELWRKLIDAGILSSAAPES  60
            MDFTTTEAA DLG LVDTIVD+VCTPEHQRELD LEQRFDR+LW KLIDAGILSSA+  S
Sbjct  1    MDFTTTEAAHDLGNLVDTIVDSVCTPEHQRELDGLEQRFDRDLWAKLIDAGILSSASATS  60

Query  61   LGGDGFGVLEQVAVLVALGHQLAAVPYLESVVLAAGALARFGSPELQQGWGVSAVSGDRI  120
            LGGDGFG LEQ+A+LVALGHQLAAVP LESVVL AGALARFG+ ELQQGWGV AVSG++ 
Sbjct  61   LGGDGFGALEQIAILVALGHQLAAVPCLESVVLGAGALARFGTEELQQGWGVPAVSGEKT  120

Query  121  LTVALDGEMGEGPVQAAGTGHGYRLTGTRTQVGYGPVADAFLVPAETDSGAAVFLVAAGD  180
            LTVALD EMGEGPVQA   G GYRLTGTRTQVG+GPVADAFLVPAETDSG AVFLVAA D
Sbjct  121  LTVALDPEMGEGPVQAVSAGAGYRLTGTRTQVGFGPVADAFLVPAETDSGTAVFLVAADD  180

Query  181  PGVAVTALATTGLGSVGHLELNGAKVDAARRVGGTDVAVWLGTLSTLSRTAFQLGVLERG  240
            PGV VTAL TTGLGSVGHL L+G ++D  R+VGG +VA WLGTL TL R AFQLGVLERG
Sbjct  181  PGVTVTALETTGLGSVGHLALDGTQLDGTRQVGGAEVAAWLGTLGTLGRAAFQLGVLERG  240

Query  241  LQMTAEYARTREQFDRPIGSFQAVGQRLADGYIDVKGLRLTLTQAAWRVAEDSLASRECP  300
            LQMTAEYARTREQFDRPIGSFQAV QRLADGYIDVKGLRLTLTQAAWRV+ED        
Sbjct  241  LQMTAEYARTREQFDRPIGSFQAVSQRLADGYIDVKGLRLTLTQAAWRVSED--------  292

Query  301  QPADIDVATAGFWAAEAGHRVAHTIVHVHGGVGVDTDHPVHRYFLAAKQTEFALGGATGQ  360
             PA++DVATA FWAA+AGHRVAHTIVHVHGGVGVDTDHPVHRYFLAAKQ EFALGGATGQ
Sbjct  293  LPAEVDVATAAFWAADAGHRVAHTIVHVHGGVGVDTDHPVHRYFLAAKQAEFALGGATGQ  352

Query  361  LRRIGRELAETPA  373
            LRRIGRELAETPA
Sbjct  353  LRRIGRELAETPA  365


>gi|254822741|ref|ZP_05227742.1| putative acyl-CoA dehydrogenase [Mycobacterium intracellulare 
ATCC 13950]
Length=365

 Score =  578 bits (1490),  Expect = 5e-163, Method: Compositional matrix adjust.
 Identities = 310/373 (84%), Positives = 332/373 (90%), Gaps = 8/373 (2%)

Query  1    MDFTTTEAAQDLGGLVDTIVDAVCTPEHQRELDKLEQRFDRELWRKLIDAGILSSAAPES  60
            MDFTTTEAA DLG LVDTIVD+VCTPEHQRELD L+QRFDR+LWRKLIDAGILSSA+  S
Sbjct  1    MDFTTTEAANDLGNLVDTIVDSVCTPEHQRELDGLDQRFDRDLWRKLIDAGILSSASASS  60

Query  61   LGGDGFGVLEQVAVLVALGHQLAAVPYLESVVLAAGALARFGSPELQQGWGVSAVSGDRI  120
            LGGDGFG LEQ+A+LVALGHQLAAVPYLESVVL AGALARFGS ELQQ WGV AV+G++ 
Sbjct  61   LGGDGFGALEQIAILVALGHQLAAVPYLESVVLGAGALARFGSEELQQNWGVPAVNGEKT  120

Query  121  LTVALDGEMGEGPVQAAGTGHGYRLTGTRTQVGYGPVADAFLVPAETDSGAAVFLVAAGD  180
            L++ALDGEMGEGPVQA   G GYRLTGTRTQVG+GPVADAFLVPAETD+G AVFLVAA D
Sbjct  121  LSIALDGEMGEGPVQALSAGAGYRLTGTRTQVGFGPVADAFLVPAETDAGTAVFLVAADD  180

Query  181  PGVAVTALATTGLGSVGHLELNGAKVDAARRVGGTDVAVWLGTLSTLSRTAFQLGVLERG  240
            PGV VTAL TTGLGSVGHL L+G +VD  RRVGG +VA WLGTL TL R+AFQLGVLERG
Sbjct  181  PGVTVTALQTTGLGSVGHLALDGTEVDGGRRVGGAEVATWLGTLGTLGRSAFQLGVLERG  240

Query  241  LQMTAEYARTREQFDRPIGSFQAVGQRLADGYIDVKGLRLTLTQAAWRVAEDSLASRECP  300
            LQMTAEYAR REQFDRPIGSFQAV QRLADGYIDVKGLRLTLTQAAWRV+ED        
Sbjct  241  LQMTAEYAREREQFDRPIGSFQAVSQRLADGYIDVKGLRLTLTQAAWRVSEDI-------  293

Query  301  QPADIDVATAGFWAAEAGHRVAHTIVHVHGGVGVDTDHPVHRYFLAAKQTEFALGGATGQ  360
             PA+IDVA+A FWAA+AGHRVAHTIVHVHGGVGVDTDHP HRYFLAAK+ EFALGGATGQ
Sbjct  294  -PAEIDVASAAFWAADAGHRVAHTIVHVHGGVGVDTDHPAHRYFLAAKEIEFALGGATGQ  352

Query  361  LRRIGRELAETPA  373
            LRRIGRELAETPA
Sbjct  353  LRRIGRELAETPA  365


>gi|296166539|ref|ZP_06848970.1| probable acyl-CoA dehydrogenase [Mycobacterium parascrofulaceum 
ATCC BAA-614]
 gi|295898151|gb|EFG77726.1| probable acyl-CoA dehydrogenase [Mycobacterium parascrofulaceum 
ATCC BAA-614]
Length=365

 Score =  578 bits (1489),  Expect = 7e-163, Method: Compositional matrix adjust.
 Identities = 301/372 (81%), Positives = 330/372 (89%), Gaps = 8/372 (2%)

Query  1    MDFTTTEAAQDLGGLVDTIVDAVCTPEHQRELDKLEQRFDRELWRKLIDAGILSSAAPES  60
            MDF+TTEAA DLGGLVDTIV++VCTPEHQRELDKLEQRFDR+LW KLIDAGILSSA+  +
Sbjct  1    MDFSTTEAANDLGGLVDTIVNSVCTPEHQRELDKLEQRFDRDLWAKLIDAGILSSASATA  60

Query  61   LGGDGFGVLEQVAVLVALGHQLAAVPYLESVVLAAGALARFGSPELQQGWGVSAVSGDRI  120
            +GGDGFGVLEQVA+LVALGHQLAAVPYLESV+L AGALARFG+ ELQQ WG  AV+G+++
Sbjct  61   VGGDGFGVLEQVAILVALGHQLAAVPYLESVMLGAGALARFGTEELQQEWGTPAVAGEKV  120

Query  121  LTVALDGEMGEGPVQAAGTGHGYRLTGTRTQVGYGPVADAFLVPAETDSGAAVFLVAAGD  180
            L VAL GEMGEGPV+A   G GYRLTGTRTQVG+ P ADAFLVPAETDSG AVF+VAAGD
Sbjct  121  LAVALLGEMGEGPVRATRAGDGYRLTGTRTQVGFAPAADAFLVPAETDSGTAVFVVAAGD  180

Query  181  PGVAVTALATTGLGSVGHLELNGAKVDAARRVGGTDVAVWLGTLSTLSRTAFQLGVLERG  240
            PGV+VTALATTGLGSVGHL L+G +V   R VGG +V VWL TL+ L R+AFQLGVLERG
Sbjct  181  PGVSVTALATTGLGSVGHLALDGTEVHGTRMVGGPEVVVWLDTLAALGRSAFQLGVLERG  240

Query  241  LQMTAEYARTREQFDRPIGSFQAVGQRLADGYIDVKGLRLTLTQAAWRVAEDSLASRECP  300
            LQ+TAEYAR REQFDRPIGSFQAV QRLADGYIDVKGLRLTLTQAAW+V+ED        
Sbjct  241  LQLTAEYAREREQFDRPIGSFQAVSQRLADGYIDVKGLRLTLTQAAWKVSEDV-------  293

Query  301  QPADIDVATAGFWAAEAGHRVAHTIVHVHGGVGVDTDHPVHRYFLAAKQTEFALGGATGQ  360
             PADIDVA+A FWAA+AGHRVAHTIVHVHGGVGVDTDHPVHRYFLAAK+ EFALGGATGQ
Sbjct  294  -PADIDVASAAFWAADAGHRVAHTIVHVHGGVGVDTDHPVHRYFLAAKEAEFALGGATGQ  352

Query  361  LRRIGRELAETP  372
            LRRIGRELAETP
Sbjct  353  LRRIGRELAETP  364


>gi|240170061|ref|ZP_04748720.1| acyl-CoA dehydrogenase FadE27 [Mycobacterium kansasii ATCC 12478]
Length=365

 Score =  575 bits (1481),  Expect = 5e-162, Method: Compositional matrix adjust.
 Identities = 306/373 (83%), Positives = 325/373 (88%), Gaps = 8/373 (2%)

Query  1    MDFTTTEAAQDLGGLVDTIVDAVCTPEHQRELDKLEQRFDRELWRKLIDAGILSSAAPES  60
            MDF+TTEAA DLGGLVDTIVDAVCTP+HQR+LD LEQRFDR+LW KL  A IL+SAA  S
Sbjct  1    MDFSTTEAAADLGGLVDTIVDAVCTPQHQRQLDALEQRFDRDLWDKLAGADILTSAAATS  60

Query  61   LGGDGFGVLEQVAVLVALGHQLAAVPYLESVVLAAGALARFGSPELQQGWGVSAVSGDRI  120
            LGGDGFGVLEQVAVLVALGHQLAAVPYLESV+LAAGALARFGS ELQQGWG  AVSG +I
Sbjct  61   LGGDGFGVLEQVAVLVALGHQLAAVPYLESVMLAAGALARFGSEELQQGWGAPAVSGSKI  120

Query  121  LTVALDGEMGEGPVQAAGTGHGYRLTGTRTQVGYGPVADAFLVPAETDSGAAVFLVAAGD  180
            LTVALDGEMGEGPVQA   G GYRLTGTRTQVGYGPVADAFLVP ETDSG  V LVAA D
Sbjct  121  LTVALDGEMGEGPVQAVRAGEGYRLTGTRTQVGYGPVADAFLVPVETDSGTVVLLVAADD  180

Query  181  PGVAVTALATTGLGSVGHLELNGAKVDAARRVGGTDVAVWLGTLSTLSRTAFQLGVLERG  240
            PGV+VTAL TTGLGSVGHL L+G  VD +R V   D   WL T+  L R+AFQLGVLERG
Sbjct  181  PGVSVTALQTTGLGSVGHLALDGVTVDGSRLVAHGDALSWLRTMYALGRSAFQLGVLERG  240

Query  241  LQMTAEYARTREQFDRPIGSFQAVGQRLADGYIDVKGLRLTLTQAAWRVAEDSLASRECP  300
            LQMTAEYARTREQFDRPIGSFQAVGQRLADGYIDVKGLRLTLTQAAW+VAED        
Sbjct  241  LQMTAEYARTREQFDRPIGSFQAVGQRLADGYIDVKGLRLTLTQAAWKVAED--------  292

Query  301  QPADIDVATAGFWAAEAGHRVAHTIVHVHGGVGVDTDHPVHRYFLAAKQTEFALGGATGQ  360
             PA++DVA+A FWAA+AGHRVAHTIVHVHGGVGVDTDHPVHRYFLAAK+TEFALGGAT Q
Sbjct  293  LPAELDVASAAFWAADAGHRVAHTIVHVHGGVGVDTDHPVHRYFLAAKETEFALGGATRQ  352

Query  361  LRRIGRELAETPA  373
            LR+IGRELAETPA
Sbjct  353  LRQIGRELAETPA  365


>gi|342862244|ref|ZP_08718886.1| acyl-CoA dehydrogenase [Mycobacterium colombiense CECT 3035]
 gi|342130322|gb|EGT83642.1| acyl-CoA dehydrogenase [Mycobacterium colombiense CECT 3035]
Length=365

 Score =  566 bits (1459),  Expect = 2e-159, Method: Compositional matrix adjust.
 Identities = 304/373 (82%), Positives = 328/373 (88%), Gaps = 8/373 (2%)

Query  1    MDFTTTEAAQDLGGLVDTIVDAVCTPEHQRELDKLEQRFDRELWRKLIDAGILSSAAPES  60
            MDFTTTEAA DLG LVDTIVD+VCTPEHQRELD L+QRFDR+LWRKLIDAGILSSA+  S
Sbjct  1    MDFTTTEAANDLGNLVDTIVDSVCTPEHQRELDALDQRFDRDLWRKLIDAGILSSASASS  60

Query  61   LGGDGFGVLEQVAVLVALGHQLAAVPYLESVVLAAGALARFGSPELQQGWGVSAVSGDRI  120
            LGGDGFG LEQ+A+LVALG QLAAVPYL+SV+L AGALARFGS +LQQ WG  AV+G++ 
Sbjct  61   LGGDGFGALEQIAILVALGRQLAAVPYLDSVMLGAGALARFGSEDLQQNWGAPAVNGEKT  120

Query  121  LTVALDGEMGEGPVQAAGTGHGYRLTGTRTQVGYGPVADAFLVPAETDSGAAVFLVAAGD  180
            LTVALD EMG+GPVQAA  G GYRLTGTRTQVG+GPVADAFLVPAETDSG AVFLV A D
Sbjct  121  LTVALDAEMGDGPVQAAKAGGGYRLTGTRTQVGFGPVADAFLVPAETDSGTAVFLVTAED  180

Query  181  PGVAVTALATTGLGSVGHLELNGAKVDAARRVGGTDVAVWLGTLSTLSRTAFQLGVLERG  240
            PGV VTAL TTGLGSVGHL L+G +VD  R+VGG +V  WLGTL TL R+AFQLGVLERG
Sbjct  181  PGVTVTALETTGLGSVGHLALDGTEVDEGRKVGGEEVVTWLGTLGTLGRSAFQLGVLERG  240

Query  241  LQMTAEYARTREQFDRPIGSFQAVGQRLADGYIDVKGLRLTLTQAAWRVAEDSLASRECP  300
            LQMTAEYAR REQFDRPIGSFQAV QRLADGYIDVKGLRLTLTQAAWRV+ED        
Sbjct  241  LQMTAEYAREREQFDRPIGSFQAVSQRLADGYIDVKGLRLTLTQAAWRVSEDI-------  293

Query  301  QPADIDVATAGFWAAEAGHRVAHTIVHVHGGVGVDTDHPVHRYFLAAKQTEFALGGATGQ  360
             PA+IDVA+A FWAA+AGHRVAHTIVHVHGGVGVDTDHP HRYFLAAK+ EFALGGATGQ
Sbjct  294  -PAEIDVASAAFWAADAGHRVAHTIVHVHGGVGVDTDHPAHRYFLAAKEIEFALGGATGQ  352

Query  361  LRRIGRELAETPA  373
            LRRIGRELAETPA
Sbjct  353  LRRIGRELAETPA  365


>gi|108801586|ref|YP_641783.1| acyl-CoA dehydrogenase-like protein [Mycobacterium sp. MCS]
 gi|119870740|ref|YP_940692.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium 
sp. KMS]
 gi|108772005|gb|ABG10727.1| acyl-CoA dehydrogenase-like protein [Mycobacterium sp. MCS]
 gi|119696829|gb|ABL93902.1| acyl-CoA dehydrogenase domain protein [Mycobacterium sp. KMS]
Length=365

 Score =  545 bits (1403),  Expect = 7e-153, Method: Compositional matrix adjust.
 Identities = 274/372 (74%), Positives = 313/372 (85%), Gaps = 8/372 (2%)

Query  1    MDFTTTEAAQDLGGLVDTIVDAVCTPEHQRELDKLEQRFDRELWRKLIDAGILSSAAPES  60
            MDF++TEAA DLGGLV TI ++VCTPEHQRELD LE RFDR+LWRKLIDA +LS+ APE+
Sbjct  1    MDFSSTEAANDLGGLVRTITESVCTPEHQRELDTLEHRFDRDLWRKLIDADVLSTTAPEA  60

Query  61   LGGDGFGVLEQVAVLVALGHQLAAVPYLESVVLAAGALARFGSPELQQGWGVSAVSGDRI  120
            LGG GFGVLE+VAVLVALG QL+AVPYLESVVLAAGA++ FGS +LQQ W   AV+G+++
Sbjct  61   LGGGGFGVLEEVAVLVALGRQLSAVPYLESVVLAAGAISTFGSEQLQQDWAAPAVAGEKV  120

Query  121  LTVALDGEMGEGPVQAAGTGHGYRLTGTRTQVGYGPVADAFLVPAETDSGAAVFLVAAGD  180
            LTVAL+GEMG+GPVQA   G G+RLTG+RT V +GPVADAFLVPAE+D G  VFLV+  D
Sbjct  121  LTVALEGEMGQGPVQAQSDGAGHRLTGSRTLVPFGPVADAFLVPAESDGGVQVFLVSTAD  180

Query  181  PGVAVTALATTGLGSVGHLELNGAKVDAARRVGGTDVAVWLGTLSTLSRTAFQLGVLERG  240
             GVAV  L TTG GSVGHLEL+GA+VDAAR VGG DV  WL     L+R AFQLGVLER 
Sbjct  181  AGVAVDTLDTTGHGSVGHLELSGAEVDAARVVGGADVLAWLTARHALARAAFQLGVLERA  240

Query  241  LQMTAEYARTREQFDRPIGSFQAVGQRLADGYIDVKGLRLTLTQAAWRVAEDSLASRECP  300
            L++TA YAR REQF+RPIGSFQAV QRLADGYID+KGLRLTLTQAAWR +E         
Sbjct  241  LELTATYAREREQFERPIGSFQAVSQRLADGYIDIKGLRLTLTQAAWRTSEG--------  292

Query  301  QPADIDVATAGFWAAEAGHRVAHTIVHVHGGVGVDTDHPVHRYFLAAKQTEFALGGATGQ  360
             PADIDV++A FWAAEAGHRVAHT VHVHGGVG+DTDHP+HRYFL+AKQTEFA+GGATGQ
Sbjct  293  LPADIDVSSAAFWAAEAGHRVAHTAVHVHGGVGIDTDHPIHRYFLSAKQTEFAVGGATGQ  352

Query  361  LRRIGRELAETP  372
            L RIGRELA+TP
Sbjct  353  LLRIGRELADTP  364


>gi|333992276|ref|YP_004524890.1| acyl-CoA dehydrogenase [Mycobacterium sp. JDM601]
 gi|333488244|gb|AEF37636.1| acyl-CoA dehydrogenase FadE27 [Mycobacterium sp. JDM601]
Length=365

 Score =  544 bits (1401),  Expect = 1e-152, Method: Compositional matrix adjust.
 Identities = 287/372 (78%), Positives = 318/372 (86%), Gaps = 8/372 (2%)

Query  1    MDFTTTEAAQDLGGLVDTIVDAVCTPEHQRELDKLEQRFDRELWRKLIDAGILSSAAPES  60
            MDF+TTEAAQDL GLV TIVDAVCTPEHQRELD LEQR D ELWRKL++A ++SSAA ES
Sbjct  1    MDFSTTEAAQDLSGLVGTIVDAVCTPEHQRELDGLEQRVDTELWRKLVEADVVSSAASES  60

Query  61   LGGDGFGVLEQVAVLVALGHQLAAVPYLESVVLAAGALARFGSPELQQGWGVSAVSGDRI  120
            LGG GFGVLEQ A+L ALG QLAAVPYLESVVLAAGALA+FGS ELQQ WG  AV+G +I
Sbjct  61   LGGGGFGVLEQAAILTALGRQLAAVPYLESVVLAAGALAKFGSAELQQAWGAPAVAGAKI  120

Query  121  LTVALDGEMGEGPVQAAGTGHGYRLTGTRTQVGYGPVADAFLVPAETDSGAAVFLVAAGD  180
            LT A DG+MGEGPVQAA TG G+RLTGTRTQVG+ PVADAFLVPAETDSG  VFLVAA D
Sbjct  121  LTAATDGDMGEGPVQAAATGSGFRLTGTRTQVGFAPVADAFLVPAETDSGTRVFLVAATD  180

Query  181  PGVAVTALATTGLGSVGHLELNGAKVDAARRVGGTDVAVWLGTLSTLSRTAFQLGVLERG  240
            PGV VT LATTGLGSVGHLEL+G ++++ R VGG +V   L TL+ L R+A+QLGVLERG
Sbjct  181  PGVTVTPLATTGLGSVGHLELSGTELESGRLVGGAEVLDHLSTLAALGRSAYQLGVLERG  240

Query  241  LQMTAEYARTREQFDRPIGSFQAVGQRLADGYIDVKGLRLTLTQAAWRVAEDSLASRECP  300
            L +TAEYAR REQFD+PIGSFQAV QRLADGYIDVKGLRLTLTQAAWRV E+        
Sbjct  241  LALTAEYAREREQFDKPIGSFQAVSQRLADGYIDVKGLRLTLTQAAWRVGEE--------  292

Query  301  QPADIDVATAGFWAAEAGHRVAHTIVHVHGGVGVDTDHPVHRYFLAAKQTEFALGGATGQ  360
             PA  +VATA FWAA+AGHRVAH+IVH+HGGVG+DTDHP+HRYFLAAKQTEFALGGATGQ
Sbjct  293  LPATSEVATAAFWAADAGHRVAHSIVHIHGGVGIDTDHPIHRYFLAAKQTEFALGGATGQ  352

Query  361  LRRIGRELAETP  372
            L  IGRELA+TP
Sbjct  353  LLAIGRELADTP  364


>gi|298526985|ref|ZP_07014394.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A]
 gi|298496779|gb|EFI32073.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A]
Length=365

 Score =  523 bits (1347),  Expect = 2e-146, Method: Compositional matrix adjust.
 Identities = 269/269 (100%), Positives = 269/269 (100%), Gaps = 0/269 (0%)

Query  1    MDFTTTEAAQDLGGLVDTIVDAVCTPEHQRELDKLEQRFDRELWRKLIDAGILSSAAPES  60
            MDFTTTEAAQDLGGLVDTIVDAVCTPEHQRELDKLEQRFDRELWRKLIDAGILSSAAPES
Sbjct  1    MDFTTTEAAQDLGGLVDTIVDAVCTPEHQRELDKLEQRFDRELWRKLIDAGILSSAAPES  60

Query  61   LGGDGFGVLEQVAVLVALGHQLAAVPYLESVVLAAGALARFGSPELQQGWGVSAVSGDRI  120
            LGGDGFGVLEQVAVLVALGHQLAAVPYLESVVLAAGALARFGSPELQQGWGVSAVSGDRI
Sbjct  61   LGGDGFGVLEQVAVLVALGHQLAAVPYLESVVLAAGALARFGSPELQQGWGVSAVSGDRI  120

Query  121  LTVALDGEMGEGPVQAAGTGHGYRLTGTRTQVGYGPVADAFLVPAETDSGAAVFLVAAGD  180
            LTVALDGEMGEGPVQAAGTGHGYRLTGTRTQVGYGPVADAFLVPAETDSGAAVFLVAAGD
Sbjct  121  LTVALDGEMGEGPVQAAGTGHGYRLTGTRTQVGYGPVADAFLVPAETDSGAAVFLVAAGD  180

Query  181  PGVAVTALATTGLGSVGHLELNGAKVDAARRVGGTDVAVWLGTLSTLSRTAFQLGVLERG  240
            PGVAVTALATTGLGSVGHLELNGAKVDAARRVGGTDVAVWLGTLSTLSRTAFQLGVLERG
Sbjct  181  PGVAVTALATTGLGSVGHLELNGAKVDAARRVGGTDVAVWLGTLSTLSRTAFQLGVLERG  240

Query  241  LQMTAEYARTREQFDRPIGSFQAVGQRLA  269
            LQMTAEYARTREQFDRPIGSFQAVGQRLA
Sbjct  241  LQMTAEYARTREQFDRPIGSFQAVGQRLA  269


>gi|126437570|ref|YP_001073261.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium 
sp. JLS]
 gi|126237370|gb|ABO00771.1| acyl-CoA dehydrogenase domain protein [Mycobacterium sp. JLS]
Length=365

 Score =  513 bits (1321),  Expect = 2e-143, Method: Compositional matrix adjust.
 Identities = 271/372 (73%), Positives = 308/372 (83%), Gaps = 8/372 (2%)

Query  1    MDFTTTEAAQDLGGLVDTIVDAVCTPEHQRELDKLEQRFDRELWRKLIDAGILSSAAPES  60
            MDF+  EAA DLGGLV TI ++VCTPEHQR+LD LEQRFDR+LWRKLIDA  LS+ APE+
Sbjct  1    MDFSRPEAAADLGGLVRTITESVCTPEHQRDLDGLEQRFDRDLWRKLIDADALSTTAPEA  60

Query  61   LGGDGFGVLEQVAVLVALGHQLAAVPYLESVVLAAGALARFGSPELQQGWGVSAVSGDRI  120
            LGG GFGVLE+VAVL+ALG QL+AVPYLESVVLAAGA+A  GS  LQQ W   A++G+++
Sbjct  61   LGGGGFGVLEEVAVLIALGRQLSAVPYLESVVLAAGAIAESGSTRLQQDWARPAIAGEKV  120

Query  121  LTVALDGEMGEGPVQAAGTGHGYRLTGTRTQVGYGPVADAFLVPAETDSGAAVFLVAAGD  180
            LT+AL+GEMG+GPVQA   G GYRLTG+RT V +GP+ADAFLVPAETD G  VFLVAAGD
Sbjct  121  LTIALEGEMGQGPVQAQPDGSGYRLTGSRTLVPFGPMADAFLVPAETDGGVKVFLVAAGD  180

Query  181  PGVAVTALATTGLGSVGHLELNGAKVDAARRVGGTDVAVWLGTLSTLSRTAFQLGVLERG  240
             GV V+AL TTG GSVGHLEL+G +VD +R VGG +   WL     L R A QLGVLER 
Sbjct  181  SGVTVSALDTTGHGSVGHLELSGVEVDGSRVVGGAEALAWLTLRHGLGRAALQLGVLERA  240

Query  241  LQMTAEYARTREQFDRPIGSFQAVGQRLADGYIDVKGLRLTLTQAAWRVAEDSLASRECP  300
            L++TA YAR REQF+RPIGSFQAV QRLADGYID+KGLRLTLTQAAWRV+E         
Sbjct  241  LELTATYAREREQFERPIGSFQAVSQRLADGYIDIKGLRLTLTQAAWRVSEG--------  292

Query  301  QPADIDVATAGFWAAEAGHRVAHTIVHVHGGVGVDTDHPVHRYFLAAKQTEFALGGATGQ  360
             PADIDVA+A FWAAEAGHRVAHT VHVHGGVG+DTDHP+HRYFLAAKQTEFA+GGATGQ
Sbjct  293  LPADIDVASAAFWAAEAGHRVAHTAVHVHGGVGIDTDHPIHRYFLAAKQTEFAVGGATGQ  352

Query  361  LRRIGRELAETP  372
            L RIGRELA+TP
Sbjct  353  LLRIGRELADTP  364


>gi|120406155|ref|YP_955984.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium 
vanbaalenii PYR-1]
 gi|119958973|gb|ABM15978.1| acyl-CoA dehydrogenase domain protein [Mycobacterium vanbaalenii 
PYR-1]
Length=369

 Score =  508 bits (1307),  Expect = 8e-142, Method: Compositional matrix adjust.
 Identities = 273/377 (73%), Positives = 306/377 (82%), Gaps = 12/377 (3%)

Query  1    MDFTTTEAAQDLGGLVDTIVDAVCTPEHQRELDKLEQ----RFDRELWRKLIDAGILSSA  56
            MDF TTEA++DLGGLV TI ++VCTPEHQRELD L      RFDR+LW KLIDA ILS+ 
Sbjct  1    MDFKTTEASEDLGGLVRTITESVCTPEHQRELDGLRPEAGGRFDRDLWGKLIDADILSTT  60

Query  57   APESLGGDGFGVLEQVAVLVALGHQLAAVPYLESVVLAAGALARFGSPELQQGWGVSAVS  116
            +PESLGG GFGVLE+VAVLVALG QLAAVPYLESV+LAAGALA FGS  LQQ W   A+ 
Sbjct  61   SPESLGGGGFGVLEEVAVLVALGRQLAAVPYLESVMLAAGALATFGSASLQQDWAAQAIK  120

Query  117  GDRILTVALDGEMGEGPVQAAGTGHGYRLTGTRTQVGYGPVADAFLVPAETDSGAAVFLV  176
            G+++L VA DGEMGEGPV A G+G GY LTG+RTQV +G  ADAFLVPAETDSG AVFLV
Sbjct  121  GEKVLAVAFDGEMGEGPVLAQGSGDGYTLTGSRTQVAFGVNADAFLVPAETDSGTAVFLV  180

Query  177  AAGDPGVAVTALATTGLGSVGHLELNGAKVDAARRVGGTDVAVWLGTLSTLSRTAFQLGV  236
             + D GVAVTAL TTG GSV  L+L G  + + RRVGG +V  WL T   L R+A+QLGV
Sbjct  181  GSADDGVAVTALDTTGHGSVAGLQLQGVAIGSDRRVGGPEVLDWLVTRHALGRSAYQLGV  240

Query  237  LERGLQMTAEYARTREQFDRPIGSFQAVGQRLADGYIDVKGLRLTLTQAAWRVAEDSLAS  296
            LER L++TA YAR REQFDRPIGSFQAV  RLADGYID+KGLRLTLTQAAWR++ED    
Sbjct  241  LERALELTASYAREREQFDRPIGSFQAVSSRLADGYIDIKGLRLTLTQAAWRLSED----  296

Query  297  RECPQPADIDVATAGFWAAEAGHRVAHTIVHVHGGVGVDTDHPVHRYFLAAKQTEFALGG  356
                 PAD+DVA+A FWAAEAGHRVAHT VHVHGGVG+D DHPVHRYFLAAKQTEFA+GG
Sbjct  297  ----LPADLDVASAAFWAAEAGHRVAHTTVHVHGGVGIDIDHPVHRYFLAAKQTEFAVGG  352

Query  357  ATGQLRRIGRELAETPA  373
            ATGQL RIGRELA+TPA
Sbjct  353  ATGQLLRIGRELADTPA  369


>gi|118468383|ref|YP_890133.1| acyl-CoA dehydrogenase [Mycobacterium smegmatis str. MC2 155]
 gi|118169670|gb|ABK70566.1| acyl-CoA dehydrogenase [Mycobacterium smegmatis str. MC2 155]
Length=365

 Score =  506 bits (1303),  Expect = 2e-141, Method: Compositional matrix adjust.
 Identities = 271/372 (73%), Positives = 303/372 (82%), Gaps = 8/372 (2%)

Query  1    MDFTTTEAAQDLGGLVDTIVDAVCTPEHQRELDKLEQRFDRELWRKLIDAGILSSAAPES  60
            MDFTTTEAA DLGGLV TI ++VCTPEHQRELD L +RFDR+LW KL++A ILS+AAPES
Sbjct  1    MDFTTTEAAADLGGLVRTITESVCTPEHQRELDGLPERFDRDLWAKLVEADILSAAAPES  60

Query  61   LGGDGFGVLEQVAVLVALGHQLAAVPYLESVVLAAGALARFGSPELQQGWGVSAVSGDRI  120
            +GG GFGVLEQ +VL ALG QLAAVPYLESVV AAGA+A FGS   +  WG  AV+G +I
Sbjct  61   VGGGGFGVLEQTSVLTALGRQLAAVPYLESVVAAAGAIAEFGSDAQRAEWGAPAVAGSKI  120

Query  121  LTVALDGEMGEGPVQAAGTGHGYRLTGTRTQVGYGPVADAFLVPAETDSGAAVFLVAAGD  180
            LTVALDGEMG+GPVQA   G  +RLTG+RT V YGPVADA+LVPAET SG +VF+VAA D
Sbjct  121  LTVALDGEMGQGPVQAQADGDDHRLTGSRTLVSYGPVADAYLVPAETGSGVSVFIVAADD  180

Query  181  PGVAVTALATTGLGSVGHLELNGAKVDAARRVGGTDVAVWLGTLSTLSRTAFQLGVLERG  240
             GV  T+L TTG GSV HL+L    V A R +GGT VA WL T  TL RTA+QLGVLER 
Sbjct  181  AGVTETSLNTTGKGSVAHLDLQDVAVGADRVLGGTQVAEWLTTRVTLGRTAYQLGVLERA  240

Query  241  LQMTAEYARTREQFDRPIGSFQAVGQRLADGYIDVKGLRLTLTQAAWRVAEDSLASRECP  300
            L++TA YAR REQFDRPIGSFQAV  RLADGYIDVKGLRLTLTQAAWR++ED        
Sbjct  241  LELTASYAREREQFDRPIGSFQAVSSRLADGYIDVKGLRLTLTQAAWRLSED--------  292

Query  301  QPADIDVATAGFWAAEAGHRVAHTIVHVHGGVGVDTDHPVHRYFLAAKQTEFALGGATGQ  360
             PAD+DVA+A FWAAEAGHRVAHT VHVHGGVG+D DHPVHRYFLAAKQ+EFALG ATGQ
Sbjct  293  LPADVDVASAAFWAAEAGHRVAHTAVHVHGGVGIDMDHPVHRYFLAAKQSEFALGSATGQ  352

Query  361  LRRIGRELAETP  372
            L RIGRELA+TP
Sbjct  353  LLRIGRELADTP  364


>gi|145222142|ref|YP_001132820.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium 
gilvum PYR-GCK]
 gi|145214628|gb|ABP44032.1| acyl-CoA dehydrogenase domain protein [Mycobacterium gilvum PYR-GCK]
Length=369

 Score =  504 bits (1299),  Expect = 7e-141, Method: Compositional matrix adjust.
 Identities = 274/377 (73%), Positives = 307/377 (82%), Gaps = 12/377 (3%)

Query  1    MDFTTTEAAQDLGGLVDTIVDAVCTPEHQRELDKLEQ----RFDRELWRKLIDAGILSSA  56
            MDFTTTEA++DLGGLV TI ++VCTPEHQRELD L      RFD+ LW KLIDA +LS+ 
Sbjct  1    MDFTTTEASEDLGGLVRTITESVCTPEHQRELDGLGPDAGGRFDKTLWSKLIDADVLSTT  60

Query  57   APESLGGDGFGVLEQVAVLVALGHQLAAVPYLESVVLAAGALARFGSPELQQGWGVSAVS  116
            APESLGG GFGVLE+VAVLVALG QLAAVPYLESVVL AGALARFG   LQQ W   AV+
Sbjct  61   APESLGGGGFGVLEEVAVLVALGRQLAAVPYLESVVLGAGALARFGDDGLQQQWAAPAVT  120

Query  117  GDRILTVALDGEMGEGPVQAAGTGHGYRLTGTRTQVGYGPVADAFLVPAETDSGAAVFLV  176
            GD++LTVALDGEMGEGPV+A  T  G  LTGTRTQV +   ADAFLVPAETDSG AVFLV
Sbjct  121  GDKVLTVALDGEMGEGPVRATTTADGVTLTGTRTQVPFAVGADAFLVPAETDSGVAVFLV  180

Query  177  AAGDPGVAVTALATTGLGSVGHLELNGAKVDAARRVGGTDVAVWLGTLSTLSRTAFQLGV  236
            AA D GV VT L TTG GSV  L+L G  +   RRVGG++V  WL T + L+R+A+QLGV
Sbjct  181  AAADAGVTVTPLDTTGHGSVAALDLQGVGITGDRRVGGSEVLDWLVTRNALARSAYQLGV  240

Query  237  LERGLQMTAEYARTREQFDRPIGSFQAVGQRLADGYIDVKGLRLTLTQAAWRVAEDSLAS  296
            +ER L++TA+YAR REQFDRPIGSFQAV  RLADGYID+KGLRLT+TQAAWRV+ED    
Sbjct  241  VERALELTAQYAREREQFDRPIGSFQAVSSRLADGYIDIKGLRLTVTQAAWRVSED----  296

Query  297  RECPQPADIDVATAGFWAAEAGHRVAHTIVHVHGGVGVDTDHPVHRYFLAAKQTEFALGG  356
                 PAD+DVA+A FWAAEAGHRVAHT VHVHGGVG+D DHPVHRYFLAAKQTEFA+GG
Sbjct  297  ----LPADVDVASAAFWAAEAGHRVAHTAVHVHGGVGIDIDHPVHRYFLAAKQTEFAVGG  352

Query  357  ATGQLRRIGRELAETPA  373
            ATGQL RIGRELA+TPA
Sbjct  353  ATGQLLRIGRELADTPA  369


>gi|315442581|ref|YP_004075460.1| acyl-CoA dehydrogenase [Mycobacterium sp. Spyr1]
 gi|315260884|gb|ADT97625.1| acyl-CoA dehydrogenase [Mycobacterium sp. Spyr1]
Length=368

 Score =  499 bits (1284),  Expect = 4e-139, Method: Compositional matrix adjust.
 Identities = 273/377 (73%), Positives = 307/377 (82%), Gaps = 13/377 (3%)

Query  1    MDFTTTEAAQDLGGLVDTIVDAVCTPEHQRELDKLEQ----RFDRELWRKLIDAGILSSA  56
            MDFTTTEA++DLGGLV TI ++VCTPEHQRELD L      RFD+ LW KLIDA +LS+ 
Sbjct  1    MDFTTTEASEDLGGLVRTITESVCTPEHQRELDGLGPDAGGRFDKTLWSKLIDADVLSTT  60

Query  57   APESLGGDGFGVLEQVAVLVALGHQLAAVPYLESVVLAAGALARFGSPELQQGWGVSAVS  116
            APESLGG GFGVLE+VAVLVALG QLAAVPYLESVVL AGALARFG+  LQQ W   AV+
Sbjct  61   APESLGGGGFGVLEEVAVLVALGRQLAAVPYLESVVLGAGALARFGADGLQQQWAAPAVT  120

Query  117  GDRILTVALDGEMGEGPVQAAGTGHGYRLTGTRTQVGYGPVADAFLVPAETDSGAAVFLV  176
            GD++LTVALDGEMGEGPV+A  T  G  LTGTRTQV +   ADAFLVPAETDSG AVFL+
Sbjct  121  GDKVLTVALDGEMGEGPVRATTT-DGVTLTGTRTQVPFAVGADAFLVPAETDSGVAVFLI  179

Query  177  AAGDPGVAVTALATTGLGSVGHLELNGAKVDAARRVGGTDVAVWLGTLSTLSRTAFQLGV  236
            AA D GV VT L TTG GSV  L+L G  +   RRVGG++V  WL T + L+R+A+QLGV
Sbjct  180  AAADAGVTVTPLDTTGHGSVAALDLQGVGITGDRRVGGSEVLDWLVTRNALARSAYQLGV  239

Query  237  LERGLQMTAEYARTREQFDRPIGSFQAVGQRLADGYIDVKGLRLTLTQAAWRVAEDSLAS  296
            +ER L++TA+YAR REQFDRPIGSFQAV  RLAD YID+KGLRLT+TQAAWRV+ED    
Sbjct  240  VERALELTAQYAREREQFDRPIGSFQAVSSRLADSYIDIKGLRLTVTQAAWRVSED----  295

Query  297  RECPQPADIDVATAGFWAAEAGHRVAHTIVHVHGGVGVDTDHPVHRYFLAAKQTEFALGG  356
                 PAD+DVATA FWAAEAGHRVAHT VHVHGGVG+D DHPVHRYFLAAKQTEFA+GG
Sbjct  296  ----LPADVDVATAAFWAAEAGHRVAHTAVHVHGGVGIDIDHPVHRYFLAAKQTEFAVGG  351

Query  357  ATGQLRRIGRELAETPA  373
            ATGQL RIGRELA+TPA
Sbjct  352  ATGQLLRIGRELADTPA  368


>gi|41406656|ref|NP_959492.1| hypothetical protein MAP0558c [Mycobacterium avium subsp. paratuberculosis 
K-10]
 gi|41395005|gb|AAS02875.1| hypothetical protein MAP_0558c [Mycobacterium avium subsp. paratuberculosis 
K-10]
Length=286

 Score =  475 bits (1222),  Expect = 6e-132, Method: Compositional matrix adjust.
 Identities = 242/286 (85%), Positives = 256/286 (90%), Gaps = 0/286 (0%)

Query  1    MDFTTTEAAQDLGGLVDTIVDAVCTPEHQRELDKLEQRFDRELWRKLIDAGILSSAAPES  60
            MDFTTTEAA DLG LVDTIVD+VCTPEHQRELD LEQRFDR+LW KLIDAGILSSA+  S
Sbjct  1    MDFTTTEAAHDLGNLVDTIVDSVCTPEHQRELDGLEQRFDRDLWAKLIDAGILSSASATS  60

Query  61   LGGDGFGVLEQVAVLVALGHQLAAVPYLESVVLAAGALARFGSPELQQGWGVSAVSGDRI  120
            LGGDGFG LEQ+A+LVALGHQLAAVPYLESVVL AGALARFG+ ELQQGWGV AVSG++ 
Sbjct  61   LGGDGFGALEQIAILVALGHQLAAVPYLESVVLGAGALARFGTEELQQGWGVPAVSGEKT  120

Query  121  LTVALDGEMGEGPVQAAGTGHGYRLTGTRTQVGYGPVADAFLVPAETDSGAAVFLVAAGD  180
            LTVALD EMGEGPVQA   G GYRLTGTRTQVG+GPVADAFLVPAETDSG AVFLVAA D
Sbjct  121  LTVALDPEMGEGPVQAVSAGAGYRLTGTRTQVGFGPVADAFLVPAETDSGTAVFLVAADD  180

Query  181  PGVAVTALATTGLGSVGHLELNGAKVDAARRVGGTDVAVWLGTLSTLSRTAFQLGVLERG  240
            PGV VTAL TTGLGSVGHL L+G ++D  R+VGG +VA WLGTL TL R AFQLGVLERG
Sbjct  181  PGVTVTALETTGLGSVGHLALDGTQLDGTRQVGGAEVAAWLGTLGTLGRAAFQLGVLERG  240

Query  241  LQMTAEYARTREQFDRPIGSFQAVGQRLADGYIDVKGLRLTLTQAA  286
            LQMTAEYARTREQFDRPIGSFQAV QRLADGYIDVKGLRLTLTQAA
Sbjct  241  LQMTAEYARTREQFDRPIGSFQAVSQRLADGYIDVKGLRLTLTQAA  286


>gi|169631237|ref|YP_001704886.1| acyl-CoA dehydrogenase [Mycobacterium abscessus ATCC 19977]
 gi|169243204|emb|CAM64232.1| Probable acyl-CoA dehydrogenase [Mycobacterium abscessus]
Length=365

 Score =  442 bits (1136),  Expect = 6e-122, Method: Compositional matrix adjust.
 Identities = 242/373 (65%), Positives = 282/373 (76%), Gaps = 8/373 (2%)

Query  1    MDFTTTEAAQDLGGLVDTIVDAVCTPEHQRELDKLEQRFDRELWRKLIDAGILSSAAPES  60
            MDF+ TEA  DL GL  TI   + TPE Q+ELDK + RFDR+LW KL +A ILS+AAPES
Sbjct  1    MDFSLTEAQTDLAGLTRTIASTISTPERQKELDKQDSRFDRQLWTKLAEADILSTAAPES  60

Query  61   LGGDGFGVLEQVAVLVALGHQLAAVPYLESVVLAAGALARFGSPELQQGWGVSAVSGDRI  120
            +GG GFGVLEQ ++LV LG +LAAVPYLESVVLAAGALA FGS  ++  W   AV+G ++
Sbjct  61   VGGAGFGVLEQSSILVELGRELAAVPYLESVVLAAGALAAFGSEAMRNDWAAPAVAGKKV  120

Query  121  LTVALDGEMGEGPVQAAGTGHGYRLTGTRTQVGYGPVADAFLVPAETDSGAAVFLVAAGD  180
            LT+AL+GE GEGPV A   G GY LTG R  V +G  ADA+LVPAET++G AVFLV+A D
Sbjct  121  LTIALEGEPGEGPVAARTEGTGYVLTGNRVLVPFGVEADAYLVPAETETGTAVFLVSADD  180

Query  181  PGVAVTALATTGLGSVGHLELNGAKVDAARRVGGTDVAVWLGTLSTLSRTAFQLGVLERG  240
             GV   AL TTG  S   L L+   V A R+VGG +V  WL    +L  +A+QLGVLER 
Sbjct  181  AGVTQQALHTTGKDSSAELILSEVPVPAERKVGGAEVVEWLRLRESLGHSAYQLGVLERA  240

Query  241  LQMTAEYARTREQFDRPIGSFQAVGQRLADGYIDVKGLRLTLTQAAWRVAEDSLASRECP  300
            L++TA+YARTREQF +PIG FQAV QRLADGYIDVKGL LTL QAAWRV+ED        
Sbjct  241  LELTADYARTREQFGKPIGGFQAVAQRLADGYIDVKGLCLTLWQAAWRVSED--------  292

Query  301  QPADIDVATAGFWAAEAGHRVAHTIVHVHGGVGVDTDHPVHRYFLAAKQTEFALGGATGQ  360
             P+D+DVATA FWAA+AGHRVAHT VHVHGGVG+D DHPVHRYFLAAK+ EFA G AT Q
Sbjct  293  LPSDVDVATAKFWAADAGHRVAHTAVHVHGGVGIDEDHPVHRYFLAAKRGEFASGSATEQ  352

Query  361  LRRIGRELAETPA  373
            LRRIGRELA+TPA
Sbjct  353  LRRIGRELADTPA  365


>gi|289752226|ref|ZP_06511604.1| acyl-CoA dehydrogenase fadE27 [Mycobacterium tuberculosis T92]
 gi|289692813|gb|EFD60242.1| acyl-CoA dehydrogenase fadE27 [Mycobacterium tuberculosis T92]
Length=251

 Score =  407 bits (1047),  Expect = 1e-111, Method: Compositional matrix adjust.
 Identities = 210/213 (99%), Positives = 210/213 (99%), Gaps = 0/213 (0%)

Query  1    MDFTTTEAAQDLGGLVDTIVDAVCTPEHQRELDKLEQRFDRELWRKLIDAGILSSAAPES  60
            MDFTTTEAAQDLGGLVDTIVDAVCTPEHQRELDKLEQRFDRELWRKLIDAGILSSAAPES
Sbjct  1    MDFTTTEAAQDLGGLVDTIVDAVCTPEHQRELDKLEQRFDRELWRKLIDAGILSSAAPES  60

Query  61   LGGDGFGVLEQVAVLVALGHQLAAVPYLESVVLAAGALARFGSPELQQGWGVSAVSGDRI  120
            LGGDGFGVLEQVAVLVALGHQLAAVPYLESVVLAAGALARFGSPELQQGWGVSAVSGDRI
Sbjct  61   LGGDGFGVLEQVAVLVALGHQLAAVPYLESVVLAAGALARFGSPELQQGWGVSAVSGDRI  120

Query  121  LTVALDGEMGEGPVQAAGTGHGYRLTGTRTQVGYGPVADAFLVPAETDSGAAVFLVAAGD  180
            LTVALDGEMGEGPVQAAGTGHGYRLTGTRTQVGYGPVADAFLVPAETDSGAAV LVAAGD
Sbjct  121  LTVALDGEMGEGPVQAAGTGHGYRLTGTRTQVGYGPVADAFLVPAETDSGAAVCLVAAGD  180

Query  181  PGVAVTALATTGLGSVGHLELNGAKVDAARRVG  213
            PGVA  ALATTGLGSVGHLELNGAKVDAARRVG
Sbjct  181  PGVASDALATTGLGSVGHLELNGAKVDAARRVG  213


>gi|325674891|ref|ZP_08154578.1| acyl-CoA dehydrogenase [Rhodococcus equi ATCC 33707]
 gi|325554477|gb|EGD24152.1| acyl-CoA dehydrogenase [Rhodococcus equi ATCC 33707]
Length=373

 Score =  395 bits (1015),  Expect = 7e-108, Method: Compositional matrix adjust.
 Identities = 213/381 (56%), Positives = 261/381 (69%), Gaps = 16/381 (4%)

Query  1    MDFTTTEAAQDLGGLVDTIVDAVCTPEHQRELDKLEQRFDRELWRKLIDAGILSSAAPES  60
            MDFT TEA QDL GL + IV  + T E  RELD  E RFDR+LW  L  +G+LS+A PES
Sbjct  1    MDFTLTEAQQDLAGLTNGIVADIVTNERLRELDSAENRFDRKLWDTLATSGVLSAALPES  60

Query  61   LGGDGFGVLEQVAVLVALGHQLAAVPYLESVVLAAGALARFGSPELQQGWGVSAVSGDRI  120
            +GGDGFG+LEQ ++L+ LG  +A VPYL S+V+AAGA+A FGS   +  W   A +G +I
Sbjct  61   VGGDGFGILEQCSILIELGRGVAPVPYLSSIVMAAGAIAEFGSDAQRSEWAAPAGAGAKI  120

Query  121  LTVALDGEMGEGP----VQAAGTGHGYRLTGTRTQVGYGPVADAFLVPAETDSGAAVFLV  176
            L  AL  E+ + P     +A  T  G+ L GT+  V   PVAD FLVPA TD G  VFLV
Sbjct  121  LAAALAEELNDNPAAPVTRAERTADGWTLRGTKIVVDGAPVADLFLVPAATDRGTVVFLV  180

Query  177  AAGDPGVAVTALATTGLGSVGHLELNGAKVDAARRVG----GTDVAVWLGTLSTLSRTAF  232
             A D GV VT   TT  G  G +EL   +VD  R +G    GT++  W+    ++  +AF
Sbjct  181  RADDAGVTVTRQQTTDFGCTGMVELADVRVDGDRVLGSVERGTEIVEWIVGRGSVGSSAF  240

Query  233  QLGVLERGLQMTAEYARTREQFDRPIGSFQAVGQRLADGYIDVKGLRLTLTQAAWRVAED  292
            Q GVL++ L+MTAEYAR R QFDRPIGSFQAV QRLADGYIDVKG+RLTL QAA+R+AE 
Sbjct  241  QFGVLDQALKMTAEYARERIQFDRPIGSFQAVAQRLADGYIDVKGVRLTLWQAAFRLAEG  300

Query  293  SLASRECPQPADIDVATAGFWAAEAGHRVAHTIVHVHGGVGVDTDHPVHRYFLAAKQTEF  352
                     P + ++ TA FWA++AGHRVAHT+VHVHGGVG+D DHPVHRYFLAAK+ EF
Sbjct  301  --------LPIEGEIETAKFWASDAGHRVAHTVVHVHGGVGLDEDHPVHRYFLAAKRQEF  352

Query  353  ALGGATGQLRRIGRELAETPA  373
             LG A+ QLRR+G ELA TPA
Sbjct  353  LLGSASDQLRRLGAELAATPA  373


>gi|111021664|ref|YP_704636.1| acyl-CoA dehydrogenase [Rhodococcus jostii RHA1]
 gi|110821194|gb|ABG96478.1| acyl-CoA dehydrogenase [Rhodococcus jostii RHA1]
Length=373

 Score =  385 bits (989),  Expect = 5e-105, Method: Compositional matrix adjust.
 Identities = 207/381 (55%), Positives = 254/381 (67%), Gaps = 16/381 (4%)

Query  1    MDFTTTEAAQDLGGLVDTIVDAVCTPEHQRELDKLEQRFDRELWRKLIDAGILSSAAPES  60
            MDFT TEA QDL GL   IV  + T +  RELD  E R DR LW  L  +G+LS+A PES
Sbjct  1    MDFTPTEAQQDLAGLTKGIVSDLVTNDRLRELDDAEDRLDRRLWSALASSGVLSAALPES  60

Query  61   LGGDGFGVLEQVAVLVALGHQLAAVPYLESVVLAAGALARFGSPELQQGWGVSAVSGDRI  120
            +GGDGFGVLEQ ++LV LG  +A VPYL S+V+AAGA+A++G+ + +  WG  A  G++I
Sbjct  61   VGGDGFGVLEQCSILVELGRAVAPVPYLSSIVMAAGAIAKYGTEQQRSDWGTPAACGEKI  120

Query  121  LTVALDGEMGEGP----VQAAGTGHGYRLTGTRTQVGYGPVADAFLVPAETDSGAAVFLV  176
            LTVALD E+ + P     +A     G+ L GT+  V   P  D FLVPA T  G AVFLV
Sbjct  121  LTVALDEELNDNPGAPVTRAERGADGWTLDGTKIVVDAAPSGDLFLVPATTPDGVAVFLV  180

Query  177  AAGDPGVAVTALATTGLGSVGHLELNGAKVDAARRVG----GTDVAVWLGTLSTLSRTAF  232
               D GV VT   T  L S G + L+G  +   R +G    G+++  WL    +L   A+
Sbjct  181  RPDDAGVTVTRQQTVDLASTGEVTLHGVSLAEDRVLGAVDRGSEIVAWLVERGSLGACAY  240

Query  233  QLGVLERGLQMTAEYARTREQFDRPIGSFQAVGQRLADGYIDVKGLRLTLTQAAWRVAED  292
            Q GVL+  L++TA YAR R QF RPIGSFQAV QRLADGYIDVKG+RLTL QAAWR++ED
Sbjct  241  QYGVLDEALKLTAAYARERVQFGRPIGSFQAVAQRLADGYIDVKGVRLTLWQAAWRLSED  300

Query  293  SLASRECPQPADIDVATAGFWAAEAGHRVAHTIVHVHGGVGVDTDHPVHRYFLAAKQTEF  352
                     P++ D+ TA FWA++AGHRVAHT+VHVHGGVG+D DHPVHRYFLAAK  EF
Sbjct  301  --------LPSEGDIQTANFWASDAGHRVAHTLVHVHGGVGLDEDHPVHRYFLAAKALEF  352

Query  353  ALGGATGQLRRIGRELAETPA  373
             LG AT QLR +G ELA  PA
Sbjct  353  RLGSATQQLRILGAELATVPA  373


>gi|312138204|ref|YP_004005540.1| acyl-CoA dehydrogenase [Rhodococcus equi 103S]
 gi|311887543|emb|CBH46855.1| putative acyl-CoA dehydrogenase [Rhodococcus equi 103S]
Length=373

 Score =  380 bits (977),  Expect = 2e-103, Method: Compositional matrix adjust.
 Identities = 212/381 (56%), Positives = 261/381 (69%), Gaps = 16/381 (4%)

Query  1    MDFTTTEAAQDLGGLVDTIVDAVCTPEHQRELDKLEQRFDRELWRKLIDAGILSSAAPES  60
            MDFT TEA QDL GL + IV  + T E  RELD  E RFDR+LW  L  +G+LS+A PES
Sbjct  1    MDFTLTEAQQDLAGLTNGIVADIVTNERLRELDSAENRFDRKLWDTLATSGVLSAALPES  60

Query  61   LGGDGFGVLEQVAVLVALGHQLAAVPYLESVVLAAGALARFGSPELQQGWGVSAVSGDRI  120
            +GGDGFG+LEQ ++L+ LG  +A VPYL S+V+AAGA+A FGS   +  W  +A +G  I
Sbjct  61   VGGDGFGILEQCSILIELGRGVAPVPYLSSIVMAAGAIAEFGSDAQRSEWAAAAGAGSAI  120

Query  121  LTVALDGEMGEGP----VQAAGTGHGYRLTGTRTQVGYGPVADAFLVPAETDSGAAVFLV  176
            L  AL  E+ + P     +A  T  G+ L GT+  V   PVAD FLVPA TD G  VFLV
Sbjct  121  LAAALAEELNDNPAAPVTRAERTADGWTLRGTKIVVDGAPVADLFLVPAATDRGTVVFLV  180

Query  177  AAGDPGVAVTALATTGLGSVGHLELNGAKVDAARRVG----GTDVAVWLGTLSTLSRTAF  232
             A D GV VT   TT  G  G +EL   +V+  R +G    GT+V  W+    ++  ++F
Sbjct  181  RADDAGVTVTRQQTTDFGCTGMVELADVRVNDDRVLGSVERGTEVVEWIVGRGSVGSSSF  240

Query  233  QLGVLERGLQMTAEYARTREQFDRPIGSFQAVGQRLADGYIDVKGLRLTLTQAAWRVAED  292
            Q GVL++ L+MTAEYAR R QFDRPIGSFQAV QRLADGYIDVKG+RLTL QAA+R+AE 
Sbjct  241  QFGVLDQALKMTAEYARERIQFDRPIGSFQAVAQRLADGYIDVKGVRLTLWQAAFRLAEG  300

Query  293  SLASRECPQPADIDVATAGFWAAEAGHRVAHTIVHVHGGVGVDTDHPVHRYFLAAKQTEF  352
                     P + ++ TA FWA++AGHRVAHT+VHVHGGVG+D DHPVHRYFLAAK+ EF
Sbjct  301  --------LPIEGEIETAKFWASDAGHRVAHTVVHVHGGVGLDEDHPVHRYFLAAKRQEF  352

Query  353  ALGGATGQLRRIGRELAETPA  373
             LG A+ QLRR+G ELA TPA
Sbjct  353  LLGSASDQLRRLGAELAATPA  373


>gi|226364201|ref|YP_002781983.1| acyl-CoA dehydrogenase [Rhodococcus opacus B4]
 gi|226242690|dbj|BAH53038.1| putative acyl-CoA dehydrogenase [Rhodococcus opacus B4]
Length=373

 Score =  380 bits (975),  Expect = 3e-103, Method: Compositional matrix adjust.
 Identities = 209/381 (55%), Positives = 251/381 (66%), Gaps = 16/381 (4%)

Query  1    MDFTTTEAAQDLGGLVDTIVDAVCTPEHQRELDKLEQRFDRELWRKLIDAGILSSAAPES  60
            MDFT TEA QDL GL   IV  + T +  RELD  E R DR LW  L  + +LS+A P S
Sbjct  1    MDFTPTEAQQDLAGLTRGIVSDLVTNDRLRELDAAEDRLDRRLWSALASSDVLSAALPGS  60

Query  61   LGGDGFGVLEQVAVLVALGHQLAAVPYLESVVLAAGALARFGSPELQQGWGVSAVSGDRI  120
            +GGDGFGVLEQ ++LV LG  +AAVPYL S+V+AAGALA++GS + +  W   A  G++I
Sbjct  61   VGGDGFGVLEQCSILVELGRAVAAVPYLSSIVMAAGALAKYGSEQQRADWAAPAARGEKI  120

Query  121  LTVALDGEMGEGP----VQAAGTGHGYRLTGTRTQVGYGPVADAFLVPAETDSGAAVFLV  176
            LTVALD E+G+ P     +A     G+ L GT+  V   P AD FLVPA T  G AVFLV
Sbjct  121  LTVALDEELGDNPAAPVTRAEPGADGWTLDGTKIVVDAAPSADLFLVPATTPDGVAVFLV  180

Query  177  AAGDPGVAVTALATTGLGSVGHLELNGAKVDAARRVG----GTDVAVWLGTLSTLSRTAF  232
               D GV VT   T  L S G + L G  +   R +G    G+++  W+    TL   A+
Sbjct  181  RPDDAGVTVTRQQTVDLASTGEVALRGVSLSGDRLLGTVEEGSEIVDWIVEHGTLGACAY  240

Query  233  QLGVLERGLQMTAEYARTREQFDRPIGSFQAVGQRLADGYIDVKGLRLTLTQAAWRVAED  292
            Q GVL+  L++TA YAR R QF RPIGSFQAV QRLADGYIDVKG+RLTL QAAWR+ E 
Sbjct  241  QYGVLDEALKLTAAYARERVQFGRPIGSFQAVAQRLADGYIDVKGVRLTLWQAAWRIGEG  300

Query  293  SLASRECPQPADIDVATAGFWAAEAGHRVAHTIVHVHGGVGVDTDHPVHRYFLAAKQTEF  352
                     P++ DV TA FWA++AGHRVAHT+VHVHGGVG+D DHPVHRYFLAAK  EF
Sbjct  301  --------LPSEGDVQTANFWASDAGHRVAHTLVHVHGGVGLDEDHPVHRYFLAAKALEF  352

Query  353  ALGGATGQLRRIGRELAETPA  373
             LG AT QLR +G ELA  PA
Sbjct  353  RLGSATQQLRVLGAELATVPA  373


>gi|229494541|ref|ZP_04388304.1| acyl-CoA dehydrogenase [Rhodococcus erythropolis SK121]
 gi|229318903|gb|EEN84761.1| acyl-CoA dehydrogenase [Rhodococcus erythropolis SK121]
Length=373

 Score =  371 bits (952),  Expect = 1e-100, Method: Compositional matrix adjust.
 Identities = 200/381 (53%), Positives = 253/381 (67%), Gaps = 16/381 (4%)

Query  1    MDFTTTEAAQDLGGLVDTIVDAVCTPEHQRELDKLEQRFDRELWRKLIDAGILSSAAPES  60
            M+FT TEA QDL GL  ++V  + T +  RELD  E RFD  LW  L  AG+L +A PES
Sbjct  1    MEFTLTEAQQDLSGLTRSVVAELVTNDRLRELDAAEDRFDALLWNALASAGVLGAALPES  60

Query  61   LGGDGFGVLEQVAVLVALGHQLAAVPYLESVVLAAGALARFGSPELQQGWGVSAVSGDRI  120
            +GGDGFGVLEQ ++L  LG  +AAVP+L S+V +A A+A FGS + +  W  +A +G+++
Sbjct  61   VGGDGFGVLEQCSILAELGRGVAAVPFLTSIVGSAAAIAEFGSDQQRDEWASAAAAGEKV  120

Query  121  LTVALDGEMGEGP----VQAAGTGHGYRLTGTRTQVGYGPVADAFLVPAETDSGAAVFLV  176
            LT AL  E  + P     +A  T  G+R+ G +  V   P+AD FLVPA T+ G AVFLV
Sbjct  121  LTAALTEEYNDDPAHPVTRAEKTAEGWRIDGAKITVDSAPLADLFLVPAITEDGVAVFLV  180

Query  177  AAGDPGVAVTALATTGLGSVGHLELNGAKVDAARRVG----GTDVAVWLGTLSTLSRTAF  232
               D GV++T  +TT   S G +E +  ++ A R +G    G+D+A W+     L  TA+
Sbjct  181  EPSDAGVSITRQSTTDFSSAGLVEFDSVQIPADRVLGSVAQGSDIAAWIVERIQLGSTAY  240

Query  233  QLGVLERGLQMTAEYARTREQFDRPIGSFQAVGQRLADGYIDVKGLRLTLTQAAWRVAED  292
            Q GVL++ L++TAEYA  R QF RPIGSFQAV QRLADGYIDVKG+RLTL  AAWR++E 
Sbjct  241  QYGVLDQALKLTAEYATERVQFGRPIGSFQAVAQRLADGYIDVKGVRLTLWAAAWRLSEG  300

Query  293  SLASRECPQPADIDVATAGFWAAEAGHRVAHTIVHVHGGVGVDTDHPVHRYFLAAKQTEF  352
                     P+D  V TA FWAA+AGHRV HT VHVHGGVG+D DHPVHRYFLAAK  EF
Sbjct  301  --------LPSDGAVQTAKFWAADAGHRVGHTAVHVHGGVGLDEDHPVHRYFLAAKHHEF  352

Query  353  ALGGATGQLRRIGRELAETPA  373
             LG AT QLR +G+ LA  PA
Sbjct  353  LLGNATDQLRALGKVLAAVPA  373


>gi|226304443|ref|YP_002764401.1| acyl-CoA dehydrogenase [Rhodococcus erythropolis PR4]
 gi|226183558|dbj|BAH31662.1| putative acyl-CoA dehydrogenase [Rhodococcus erythropolis PR4]
Length=373

 Score =  369 bits (946),  Expect = 5e-100, Method: Compositional matrix adjust.
 Identities = 200/381 (53%), Positives = 254/381 (67%), Gaps = 16/381 (4%)

Query  1    MDFTTTEAAQDLGGLVDTIVDAVCTPEHQRELDKLEQRFDRELWRKLIDAGILSSAAPES  60
            M+FT TEA QDL GL  ++V  + T +  RELD  E RFD  LW  L  AG+L +A PES
Sbjct  1    MEFTLTEAQQDLSGLTRSVVTELVTNDRLRELDAAEDRFDALLWNALASAGVLGAALPES  60

Query  61   LGGDGFGVLEQVAVLVALGHQLAAVPYLESVVLAAGALARFGSPELQQGWGVSAVSGDRI  120
            +GGDGFGVLEQ ++L  LG  +AAVP+L S+V +A A+A FGS + +  W  +A +G++I
Sbjct  61   VGGDGFGVLEQCSILAELGRGVAAVPFLTSIVGSAAAIAEFGSDKQRDDWASAAAAGEKI  120

Query  121  LTVALDGEMGEG---PV-QAAGTGHGYRLTGTRTQVGYGPVADAFLVPAETDSGAAVFLV  176
            LT AL  E  +    P+ +A  T  G+R+ G +  V   P+AD FLVPA T+ G AVFLV
Sbjct  121  LTAALAEEYNDDSAHPITRAEKTADGWRIDGAKITVDSAPLADLFLVPAITEDGVAVFLV  180

Query  177  AAGDPGVAVTALATTGLGSVGHLELNGAKVDAARRVG----GTDVAVWLGTLSTLSRTAF  232
               D GV++T  +TT   S   +E +  ++ A R +G    G+D+A W+     L  +A+
Sbjct  181  EPSDAGVSITRQSTTDFSSAALVEFDSVQIPADRVLGSVAQGSDIAAWIVERIQLGSSAY  240

Query  233  QLGVLERGLQMTAEYARTREQFDRPIGSFQAVGQRLADGYIDVKGLRLTLTQAAWRVAED  292
            Q GVL++ L++TAEYA  R QF RPIGSFQAV QRLADGYIDVKG+RLTL  AAWR++E 
Sbjct  241  QYGVLDQALKLTAEYATERVQFGRPIGSFQAVAQRLADGYIDVKGVRLTLWAAAWRLSEG  300

Query  293  SLASRECPQPADIDVATAGFWAAEAGHRVAHTIVHVHGGVGVDTDHPVHRYFLAAKQTEF  352
                     P+D  V TA FWAA+AGHRV HT VHVHGGVG+D DHPVHRYFLAAK  EF
Sbjct  301  --------LPSDGAVQTAKFWAADAGHRVGHTAVHVHGGVGLDEDHPVHRYFLAAKHHEF  352

Query  353  ALGGATGQLRRIGRELAETPA  373
             LG AT QLR +G+ELA  PA
Sbjct  353  LLGNATDQLRALGKELAAVPA  373


>gi|310752620|gb|ADP09631.1| FadE27 [Rhodococcus rhodochrous]
Length=371

 Score =  349 bits (896),  Expect = 3e-94, Method: Compositional matrix adjust.
 Identities = 201/379 (54%), Positives = 243/379 (65%), Gaps = 14/379 (3%)

Query  1    MDFTTTEAAQDLGGLVDTIVDAVCTPEHQRELDKLEQRFDRELWRKLIDAGILSSAAPES  60
            MDFT TEA QDL  L  +IV  + T EH R LD  E R DR LW  L  +G+L +A PES
Sbjct  1    MDFTLTEAQQDLAELTRSIVADIVTNEHLRTLDASEDRLDRTLWDTLASSGVLGAALPES  60

Query  61   LGGDGFGVLEQVAVLVALGHQLAAVPYLESVVLAAGALARFGSPELQQGWGVSAVSGDRI  120
            LGGDG+G LEQ ++L  LG  ++AVPY+ S+   A A+A FG+ E Q  WG  A +G++I
Sbjct  61   LGGDGYGPLEQASILRELGRGVSAVPYIGSIAACASAIAEFGTAEQQAEWGRPAATGEQI  120

Query  121  LTVALDGEMGEGP----VQAAGTGHGYRLTGTRTQVGYGPVADAFLVPAETDSGAAVFLV  176
            L+ AL  E+   P     +A  TG G+ L G +  V   PVAD FLVPA      +VFLV
Sbjct  121  LSAALAEELNPDPTTPATRAQATGDGHVLDGVKIVVDAAPVADGFLVPATVGDSVSVFLV  180

Query  177  AAGDPGVAVTALATTGLGSVGHLELNGAKVDAARRVG--GTDVAVWLGTLSTLSRTAFQL  234
               DPGV++T   TT   S G + L    + A R +G  G  VA WL   S L   A+Q 
Sbjct  181  RPDDPGVSITRQQTTDFDSRGIVTLEQVPLPADRVLGTDGVAVATWLRDRSLLGSAAYQC  240

Query  235  GVLERGLQMTAEYARTREQFDRPIGSFQAVGQRLADGYIDVKGLRLTLTQAAWRVAEDSL  294
            GVLE+ L++TA+YAR R QFDRPIGSFQAV QRLAD YIDVK +RLTL QAA+R+     
Sbjct  241  GVLEQALELTAQYARERVQFDRPIGSFQAVSQRLADAYIDVKAVRLTLWQAAFRMV----  296

Query  295  ASRECPQPADIDVATAGFWAAEAGHRVAHTIVHVHGGVGVDTDHPVHRYFLAAKQTEFAL  354
                  +  D  + TA FWAA+AGHRVAHT VHVHGGVG+D DHPVHRYFLAAK  EF L
Sbjct  297  ----SGERHDDALRTAAFWAADAGHRVAHTTVHVHGGVGLDEDHPVHRYFLAAKHHEFLL  352

Query  355  GGATGQLRRIGRELAETPA  373
            G AT QLR +GRELA+ PA
Sbjct  353  GSATDQLRALGRELADVPA  371


>gi|289445103|ref|ZP_06434847.1| acyl-CoA dehydrogenase fadE27 [Mycobacterium tuberculosis T46]
 gi|289418022|gb|EFD15262.1| acyl-CoA dehydrogenase fadE27 [Mycobacterium tuberculosis T46]
Length=168

 Score =  337 bits (864),  Expect = 2e-90, Method: Compositional matrix adjust.
 Identities = 167/168 (99%), Positives = 168/168 (100%), Gaps = 0/168 (0%)

Query  206  VDAARRVGGTDVAVWLGTLSTLSRTAFQLGVLERGLQMTAEYARTREQFDRPIGSFQAVG  265
            +DAARRVGGTDVAVWLGTLSTLSRTAFQLGVLERGLQMTAEYARTREQFDRPIGSFQAVG
Sbjct  1    MDAARRVGGTDVAVWLGTLSTLSRTAFQLGVLERGLQMTAEYARTREQFDRPIGSFQAVG  60

Query  266  QRLADGYIDVKGLRLTLTQAAWRVAEDSLASRECPQPADIDVATAGFWAAEAGHRVAHTI  325
            QRLADGYIDVKGLRLTLTQAAWRVAEDSLASRECPQPADIDVATAGFWAAEAGHRVAHTI
Sbjct  61   QRLADGYIDVKGLRLTLTQAAWRVAEDSLASRECPQPADIDVATAGFWAAEAGHRVAHTI  120

Query  326  VHVHGGVGVDTDHPVHRYFLAAKQTEFALGGATGQLRRIGRELAETPA  373
            VHVHGGVGVDTDHPVHRYFLAAKQTEFALGGATGQLRRIGRELAETPA
Sbjct  121  VHVHGGVGVDTDHPVHRYFLAAKQTEFALGGATGQLRRIGRELAETPA  168


>gi|289445102|ref|ZP_06434846.1| acyl-CoA dehydrogenase fadE27 [Mycobacterium tuberculosis T46]
 gi|289418021|gb|EFD15261.1| acyl-CoA dehydrogenase fadE27 [Mycobacterium tuberculosis T46]
Length=192

 Score =  316 bits (809),  Expect = 4e-84, Method: Compositional matrix adjust.
 Identities = 165/182 (91%), Positives = 168/182 (93%), Gaps = 1/182 (0%)

Query  1    MDFTTTEAAQDLGGLVDTIVDAVCTPEHQRELDKLEQRFDRELWRKLIDAGILSSAAPES  60
            MDFTTTEAAQDLGGLVDTIVDAVCTPEHQRELDKLEQRFDRELWRKLIDAGILSSAAPES
Sbjct  1    MDFTTTEAAQDLGGLVDTIVDAVCTPEHQRELDKLEQRFDRELWRKLIDAGILSSAAPES  60

Query  61   LGGDGFGVLEQVAVLVALGHQLAAVPYLESVVLAAGALARFGSPELQQGWGVSAVSGDRI  120
            LGGDGFGVLEQVAVLVALGHQLAAVPYLESVVLAAGALARFGSPELQQGWGVSAVSGDRI
Sbjct  61   LGGDGFGVLEQVAVLVALGHQLAAVPYLESVVLAAGALARFGSPELQQGWGVSAVSGDRI  120

Query  121  LTVALDGEMGEGPVQAAGTGHGYRLTGTRTQVGYGPVADAFL-VPAETDSGAAVFLVAAG  179
            LTVALDGEMGEGPVQAAGTGHGYRLTGTRTQVGYGPVA       +ET    + F  AAG
Sbjct  121  LTVALDGEMGEGPVQAAGTGHGYRLTGTRTQVGYGPVARRISGTSSETRFRCSRFPGAAG  180

Query  180  DP  181
            +P
Sbjct  181  EP  182


>gi|145595135|ref|YP_001159432.1| acyl-CoA dehydrogenase domain-containing protein [Salinispora 
tropica CNB-440]
 gi|145304472|gb|ABP55054.1| acyl-CoA dehydrogenase domain protein [Salinispora tropica CNB-440]
Length=374

 Score =  312 bits (800),  Expect = 4e-83, Method: Compositional matrix adjust.
 Identities = 184/375 (50%), Positives = 225/375 (60%), Gaps = 16/375 (4%)

Query  1    MDFTTTEAAQDLGGLVDTIVDAVCTPEHQRELDKLEQRFDRELWRKLIDAGILSSAAPES  60
            M FT  E+ +DL  L   I+    T +  R+++  +   DR LW++L  AG+L++A P  
Sbjct  1    MRFTPGESHRDLALLTRQILTDRVTVDRLRDIEAKDICLDRPLWQELATAGVLAAALPRR  60

Query  61   LGGDGFGVLEQVAVLVALGHQLAAVPYLESVVLAAGALARFGSPELQQGWGVSAVSGDRI  120
             GGDG G+LEQ  VLV +G  +A VPYL S+V AA  LA FG       W   A+ G  I
Sbjct  61   AGGDGLGLLEQCGVLVEVGRSVAPVPYLSSIVTAAAGLATFGDERQLSHWVTPALKGSVI  120

Query  121  LTVALDGEMGEGPVQAAGTGHGYRLTGTRTQVGYGPVADAFLVPAETDSGAAVFLVAAGD  180
            LT AL     EG V A      + LTG +T V   P AD  LVPA+ D   AVFLV + D
Sbjct  121  LTAAL----AEGAVHAERVAGRWVLTGAKTTVPAAPDADLVLVPAKVDGATAVFLVCSDD  176

Query  181  PGVAVTALATTGLGSVGHLELNGAKVDAARRVG----GTDVAVWLGTLSTLSRTAFQLGV  236
            PGV V      G    G ++L    +   R +G    G  +A WL T +T+   A QLGV
Sbjct  177  PGVTVEPQQVAGGEGAGWIDLARVALPDGRLLGTVADGETIAAWLTTRATVGSCAVQLGV  236

Query  237  LERGLQMTAEYARTREQFDRPIGSFQAVGQRLADGYIDVKGLRLTLTQAAWRVAEDSLAS  296
             ER L++TAEY RTR QF RPIG+FQAV QRLAD Y+DV+ +RLTL QAAWR+AE     
Sbjct  237  TERALELTAEYVRTRIQFGRPIGTFQAVAQRLADAYVDVEAIRLTLWQAAWRLAE----G  292

Query  297  RECPQPADIDVATAGFWAAEAGHRVAHTIVHVHGGVGVDTDHPVHRYFLAAKQTEFALGG  356
              CP     +VATA FWAA+AGHRVAHT VH+HGGVG+D DH +HRYFLAAK  EF LGG
Sbjct  293  LPCPT----EVATAKFWAADAGHRVAHTAVHLHGGVGIDLDHHLHRYFLAAKHHEFRLGG  348

Query  357  ATGQLRRIGRELAET  371
            AT  LR IG  L  T
Sbjct  349  ATAHLRAIGAALTST  363


>gi|333918684|ref|YP_004492265.1| acyl-CoA dehydrogenase domain-containing protein [Amycolicicoccus 
subflavus DQS3-9A1]
 gi|333480905|gb|AEF39465.1| Acyl-CoA dehydrogenase domain protein [Amycolicicoccus subflavus 
DQS3-9A1]
Length=360

 Score =  308 bits (788),  Expect = 1e-81, Method: Compositional matrix adjust.
 Identities = 178/370 (49%), Positives = 219/370 (60%), Gaps = 13/370 (3%)

Query  1    MDFTTTEAAQDLGGLVDTIVDAVCTPEHQRELDKLEQRFDRELWRKLIDAGILSSAAPES  60
            MDFT TEA  DL GL   ++    T    R L      FDRELW  +  AG++ +A P +
Sbjct  1    MDFTITEAQGDLAGLAKQVLSDWNTKHPDRPLGG----FDRELWTAMCSAGLVDAALPNT  56

Query  61   LGGDGFGVLEQVAVLVALGHQLAAVPYLESVVLAAGALARFGSPELQQGWGVSAVSGDRI  120
            +GG GFGVLEQ ++L  +G   A VP+L SV  AA  LA FG+PE  + W +  V G  I
Sbjct  57   VGGAGFGVLEQCSILTEIGRTCAPVPFLSSVAGAASVLAEFGTPEQIERWLIPVVRGTAI  116

Query  121  LTVALDGEMGEGPVQAAGTGHGYRLTGTRTQVGYGPVADAFLVPAETDSGAAVFLVAAGD  180
            L+ A+       P  A     G+ L G++T +  G  ADAFL  AET  G A+F V    
Sbjct  117  LSPAIADAGDPAPFTAQRGQEGWTLAGSQTAILDGAFADAFLCEAETPDGRAIFCVPRTA  176

Query  181  PGVAVTALATTGLGSVGHLELNGAKVDAARRVGGTDVAVWLGTLSTLSRTAFQLGVLERG  240
             GV V+            LEL    V     + G     WL    TL   A QLG LE  
Sbjct  177  SGVTVSEQDVVDGADAAQLELEAVTVRDTEILAGA-APTWLRQRLTLGLCAQQLGTLEAA  235

Query  241  LQMTAEYARTREQFDRPIGSFQAVGQRLADGYIDVKGLRLTLTQAAWRVAEDSLASRECP  300
            L+MT++YARTREQF +PIGSFQAV QRLAD YIDV+ +RLTL QAAW+++          
Sbjct  236  LEMTSDYARTREQFGKPIGSFQAVRQRLADAYIDVEAVRLTLWQAAWQISAG--------  287

Query  301  QPADIDVATAGFWAAEAGHRVAHTIVHVHGGVGVDTDHPVHRYFLAAKQTEFALGGATGQ  360
            +PA   VATA FWAAEAGHRVAHT VH+HGGVG+D D+P+HRYF+AAK+ EFA GGAT Q
Sbjct  288  EPAADAVATAKFWAAEAGHRVAHTAVHIHGGVGIDLDYPLHRYFVAAKRAEFAFGGATSQ  347

Query  361  LRRIGRELAE  370
            LR +G  LAE
Sbjct  348  LRTLGTRLAE  357


>gi|159038382|ref|YP_001537635.1| acyl-CoA dehydrogenase domain-containing protein [Salinispora 
arenicola CNS-205]
 gi|157917217|gb|ABV98644.1| acyl-CoA dehydrogenase domain protein [Salinispora arenicola 
CNS-205]
Length=367

 Score =  298 bits (764),  Expect = 8e-79, Method: Compositional matrix adjust.
 Identities = 179/372 (49%), Positives = 221/372 (60%), Gaps = 15/372 (4%)

Query  1    MDFTTTEAAQDLGGLVDTIVDAVCTPEHQRELDKLEQRFDRELWRKLIDAGILSSAAPES  60
            M F+ +E+ +DL  L   I+    T +  RE++      DR LW++L  AG+L++A P  
Sbjct  1    MRFSPSESHRDLATLTRQILTDRVTNDWLREIEAKNICVDRPLWQELAKAGVLAAALPHR  60

Query  61   LGGDGFGVLEQVAVLVALGHQLAAVPYLESVVLAAGALARFGSPELQQGWGVSAVSGDRI  120
             GGDG G+LEQ  VLV +G  +A VPYL  +V A   LA FGS      W   A+ G  I
Sbjct  61   AGGDGLGLLEQCGVLVEVGRAVAPVPYLSGIVTAVAGLATFGSDAQLARWVAPALEGTVI  120

Query  121  LTVALDGEMGEGPVQAAGTGHGYRLTGTRTQVGYGPVADAFLVPAETDSGAAVFLVAAGD  180
            LT AL     +G V A      + LTG R+ V   P AD  LVPAE D   AVFLV + D
Sbjct  121  LTAAL---AVDGDVHAERVADRWVLTGARSAVPAAPDADLVLVPAEVDGRTAVFLVCSDD  177

Query  181  PGVAVTALATTGLGSVGHLELNGAKVDAARRVG----GTDVAVWLGTLSTLSRTAFQLGV  236
            PGV V      G    G L+L+   +   R +G    G  +A WL   +T+   A QLGV
Sbjct  178  PGVTVEPQEIAGGEGAGWLDLDRVALADDRLLGSVADGRAIAAWLTARATIGSCAVQLGV  237

Query  237  LERGLQMTAEYARTREQFDRPIGSFQAVGQRLADGYIDVKGLRLTLTQAAWRVAEDSLAS  296
             ER L++TA Y   R QF RPIG+FQAV QRLAD Y+DV+ +RLTL QAAWR+AE     
Sbjct  238  TERALELTAGYTCDRIQFGRPIGTFQAVTQRLADAYVDVEAIRLTLWQAAWRLAE----G  293

Query  297  RECPQPADIDVATAGFWAAEAGHRVAHTIVHVHGGVGVDTDHPVHRYFLAAKQTEFALGG  356
              CP     +VATA FWAA+AGHRVAHT VH+HGGVG+D DH +HRYF+AAK  EF LGG
Sbjct  294  LPCPT----EVATAKFWAADAGHRVAHTAVHLHGGVGIDIDHRLHRYFVAAKHHEFRLGG  349

Query  357  ATGQLRRIGREL  368
            AT QLR IG  L
Sbjct  350  ATAQLRAIGAAL  361


>gi|54022498|ref|YP_116740.1| putative acyl-CoA dehydrogenase [Nocardia farcinica IFM 10152]
 gi|54014006|dbj|BAD55376.1| putative acyl-CoA dehydrogenase [Nocardia farcinica IFM 10152]
Length=367

 Score =  290 bits (743),  Expect = 2e-76, Method: Compositional matrix adjust.
 Identities = 181/375 (49%), Positives = 218/375 (59%), Gaps = 15/375 (4%)

Query  1    MDFTTTEAAQDLGGLVDTIVDAVCTPEHQRELDKLEQRFDRELWRKLIDAGILSSAAPES  60
            MDFT TE   DLG L   +   + T +  RELD    RFD  LW  L + GIL++  PE 
Sbjct  1    MDFTPTEGQLDLGTLTGEVCGKLVTADRLRELDT-AGRFDEPLWAALAETGILAATLPEE  59

Query  61   LGGDGFGVLEQVAVLVALGHQLAAVPYLESVVLAAGALARFGSPELQQGWGVSAVSGDRI  120
            + G G G LEQ AVL  LG  +AAVPYL SVV+ AGALARFGS E Q+ W   A +G  +
Sbjct  60   VDGGGLGPLEQAAVLRELGKSVAAVPYLWSVVVGAGALARFGSAE-QRKWARRAGAGSVV  118

Query  121  LTVALDGEMGEGPVQAAGTG----HGYRLTGTRTQVGYGPVADAFLVPAETDSGAAVFLV  176
            LT AL  +    P   A         +RLTG +T V Y   A   LVPA       VFLV
Sbjct  119  LTAALAEDHNYEPTVPATVAVERDGAWRLTGAKTTVAYADRAARILVPATVSGATGVFLV  178

Query  177  AAGDPGVAVTALATTGLGSVGHLELNGAKVDAARRVG-GTDVAVWLGTLSTLSRTAFQLG  235
                 GV ++        +   +E   A  +    +  G D+  WL T +     A QLG
Sbjct  179  DPAAAGVRISPQEVVDFSAESAVEFADAPAELVGTLAEGGDILDWLLTRAWFGLAAQQLG  238

Query  236  VLERGLQMTAEYARTREQFDRPIGSFQAVGQRLADGYIDVKGLRLTLTQAAWRVAEDSLA  295
             LE+ L + A YAR REQF + IGSFQAV QRLAD YIDV+GLRL +TQAAWR+AE  L+
Sbjct  239  TLEQALDLVAGYAREREQFGKAIGSFQAVAQRLADAYIDVQGLRLAVTQAAWRLAE-GLS  297

Query  296  SRECPQPADIDVATAGFWAAEAGHRVAHTIVHVHGGVGVDTDHPVHRYFLAAKQTEFALG  355
            + E        V TA FWAA+AGHRVAHT+VH+HGGVG+D DH VH YF AAK  EFALG
Sbjct  298  AAEA-------VHTAKFWAADAGHRVAHTVVHIHGGVGIDRDHIVHNYFTAAKHNEFALG  350

Query  356  GATGQLRRIGRELAE  370
            GAT  LR +G  LA+
Sbjct  351  GATDHLRALGALLAD  365


>gi|343926115|ref|ZP_08765627.1| putative acyl-CoA dehydrogenase [Gordonia alkanivorans NBRC 16433]
 gi|343764041|dbj|GAA12553.1| putative acyl-CoA dehydrogenase [Gordonia alkanivorans NBRC 16433]
Length=373

 Score =  276 bits (707),  Expect = 3e-72, Method: Compositional matrix adjust.
 Identities = 177/380 (47%), Positives = 220/380 (58%), Gaps = 14/380 (3%)

Query  1    MDFTTTEAAQDLGGLVDTIVDAVCTPEHQRELDKLEQRFDRELWRKLIDAGIL----SSA  56
            MDF+  E+  D+ GL   I  +V TPE   +L+      D +LW++L  AG+L    SSA
Sbjct  1    MDFSLPESGDDVRGLARDIATSVSTPERVADLESTRAPIDSDLWQQLGSAGLLGLELSSA  60

Query  57   APESLGGDGFGVLEQVAVLVALGHQLAAVPYLESVVLAAGALARFGSPELQQGWGVSAVS  116
            A    GGD   V+E   V   LG  LA VP+ +  V A   +A  GS  L+     SA S
Sbjct  61   AVGDAGGD-LSVIENALVATELGRVLARVPFGQHAVAALPVIAAHGSSGLRDRVLASAAS  119

Query  117  GDRILTVALDGEMGEGPVQAAGT---GHGYRLTGTRTQVGYGPVADAFLVPAETDSGAAV  173
            G  +++VA++ ++G  P  +  T     G RL+G +  V Y   AD  LV A    G  V
Sbjct  120  GGLVVSVAIEEDLGS-PTDSPTTTLSSDGSRLSGVKVGVPYAEAADLLLVNATGPDGVVV  178

Query  174  FLVAAGDPGVAVTALATTGLGSVGHLELNGAKVDAARRVGGTDVAVWLGTLSTLSRTAFQ  233
              V     G+ +TA   TGL    H+E     VD+   + G+DVA  L    TL+ +A Q
Sbjct  179  VAVPTTAEGIRITATPATGLIPTAHVEFADVPVDSDAVLAGSDVADALRVRVTLACSAEQ  238

Query  234  LGVLERGLQMTAEYARTREQFDRPIGSFQAVGQRLADGYIDVKGLRLTLTQAAWRVAEDS  293
             GV+ R L++TAEYAR REQF R IGSFQAV QRLADGYID +GL LT TQAAW      
Sbjct  239  TGVVGRALELTAEYAREREQFGRAIGSFQAVAQRLADGYIDAQGLALTTTQAAWL-----  293

Query  294  LASRECPQPADIDVATAGFWAAEAGHRVAHTIVHVHGGVGVDTDHPVHRYFLAAKQTEFA  353
            LA+ +     +  +ATA FWAAEAGHRVAHT VHVHGGVG+DT HPVHRYFL AK  EFA
Sbjct  294  LANSDNAGEINNAIATAKFWAAEAGHRVAHTTVHVHGGVGLDTSHPVHRYFLRAKHNEFA  353

Query  354  LGGATGQLRRIGRELAETPA  373
             G AT  +R IG ELA TPA
Sbjct  354  YGSATASVRAIGTELAATPA  373


>gi|119716742|ref|YP_923707.1| acyl-CoA dehydrogenase domain-containing protein [Nocardioides 
sp. JS614]
 gi|119537403|gb|ABL82020.1| acyl-CoA dehydrogenase domain protein [Nocardioides sp. JS614]
Length=370

 Score =  275 bits (702),  Expect = 1e-71, Method: Compositional matrix adjust.
 Identities = 182/379 (49%), Positives = 225/379 (60%), Gaps = 15/379 (3%)

Query  1    MDFTTTEAAQDLGGLVDTIVDAVCTPEHQRELDKLEQRFDRELWRKLIDAGILSSAAPES  60
            MDFT T    +   L   I+    T E  + ++    RFDR+LW +L  AG+L  A PE 
Sbjct  1    MDFTFTPEQDEAAALAAGILRDRATTERLKAVEAGGDRFDRDLWAELGAAGLLGLALPER  60

Query  61   LGGDGFGVLEQVAVLVALGHQLAAVPYLESVVLAAGALARFGSPELQQGWGVSAVSGDRI  120
              G G G++E   VLV +G  +A VP L +   AA  LA  G   LQ+ W   AV+G  +
Sbjct  61   YDGAGLGLIELCRVLVEVGRTVAPVP-LVAHGPAARLLAESGPTALQERWLPGAVAGALV  119

Query  121  LTVALDGEMGEGPVQ----AAGTGHGYRLTGTRTQVGYGPVADAFLVPAETDSGAAVFLV  176
            LT A+  E    P +    A   G GYR+TG++  V  GP ADAFLVPAET SG  VFLV
Sbjct  120  LTAAVAEERAFAPSRPTTVATPDGEGYRITGSKAIVPAGPYADAFLVPAETPSGTGVFLV  179

Query  177  AAGDPGVAVTALATTGLGSVGHLELNGAKVDAARRVGGTDVAV--WLGTLSTLSRTAFQL  234
              GDPG+ V A   +    V  L+L+G  V + R VG  D +    L  L  L+ +A QL
Sbjct  180  EPGDPGLTVVAQTFSDRDGVARLDLDGVAVGSDRAVGAADGSTDRRLRHLLLLAASAEQL  239

Query  235  GVLERGLQMTAEYARTREQFDRPIGSFQAVGQRLADGYIDVKGLRLTLTQAAWRVAEDSL  294
            G+ E  L++T+ YA+TREQF RPIG+FQAV QRLADGYIDV G RLTL QAAWR+ E   
Sbjct  240  GITEGSLRLTSSYAKTREQFGRPIGTFQAVSQRLADGYIDVLGQRLTLWQAAWRLEEG--  297

Query  295  ASRECPQPADIDVATAGFWAAEAGHRVAHTIVHVHGGVGVDTDHPVHRYFLAAKQTEFAL  354
                   PAD +VA A  WAA+AGHR+AHT VHVHGGVG+D D   HRYF +AK+ EF  
Sbjct  298  ------LPADSEVAIAKLWAADAGHRLAHTTVHVHGGVGIDLDGEAHRYFTSAKRFEFLH  351

Query  355  GGATGQLRRIGRELAETPA  373
            GGAT Q   +GR LA  PA
Sbjct  352  GGATEQALAVGRALAAEPA  370


>gi|312195242|ref|YP_004015303.1| acyl-CoA dehydrogenase domain-containing protein [Frankia sp. 
EuI1c]
 gi|311226578|gb|ADP79433.1| acyl-CoA dehydrogenase domain-containing protein [Frankia sp. 
EuI1c]
Length=384

 Score =  272 bits (696),  Expect = 6e-71, Method: Compositional matrix adjust.
 Identities = 187/388 (49%), Positives = 226/388 (59%), Gaps = 23/388 (5%)

Query  1    MDFTTTEAAQDLGGLVDTIVDAVCTPEHQR--ELDKLEQR---FDRELWRKLIDAGILSS  55
            MDF  TE  ++L  L   I+D + TPE     E D L       DRELW +L  A +L  
Sbjct  1    MDFAYTEEQRELAALAAQILDRMVTPERLTAIEADVLAGHGDGLDRELWAELAKANLLGV  60

Query  56   AAPESLGGDGFGVLEQVAVLVALGHQLAAVPYLESVVLAAGALARFGSPELQQGWGVSAV  115
              PE  GG G+GV E+  VL A G  LA VP   S   AAGA+A  G+P  ++ W  + V
Sbjct  61   GVPEEFGGLGYGVFEECLVLEAAGRVLAPVPLWASATAAAGAIAAHGTPAQRETWLPALV  120

Query  116  SGDRILTVALDGEMGE----GPVQAAGTGHGYRLTGTRTQVGYGPVADAFLVPAETDSGA  171
            SG++++TVAL    G         AA T  G+RL G +T V Y   ADAFLVPA T+ G 
Sbjct  121  SGEKVVTVALAEPRGSDAATPATTAAPTPTGWRLDGVKTAVPYAAAADAFLVPARTEHGV  180

Query  172  AVFLVAAGDPGVAVTALATTGLGSVGHLELNGAKVDAARRVGGTD------VAVWLGTLS  225
            AVFLV     GV+V    TT   +VG L L+G  VD    +GG D      VAV L   +
Sbjct  181  AVFLVDPATAGVSVERQLTTAREAVGLLTLDGVLVDEGAALGGPDGAAGTAVAVSLRDRA  240

Query  226  TLSRTAFQLGVLERGLQMTAEYARTREQFDRPIGSFQAVGQRLADGYIDVKGLRLTLTQA  285
            TL   A QLGV ER ++  AEY   R QF RPIGSFQAVG RLAD +IDV+ +RLTL QA
Sbjct  241  TLGLCALQLGVTERAMRAAAEYTTNRVQFGRPIGSFQAVGHRLADCFIDVEAIRLTLWQA  300

Query  286  AWRVAEDSLASRECPQPADIDVATAGFWAAEAGHRVAHTIVHVHGGVGVDTDHPVHRYFL  345
            AWR AE         Q A   VATA FWAA+ GHRVA  +VHVHGG+G+  ++ VHRYFL
Sbjct  301  AWRFAEG--------QDATEAVATAKFWAADGGHRVASAVVHVHGGMGIAEEYFVHRYFL  352

Query  346  AAKQTEFALGGATGQLRRIGRELAETPA  373
             AK+ EF LG A  Q RR+G  LA+TPA
Sbjct  353  HAKRLEFTLGNAAEQARRLGTLLADTPA  380


>gi|296141481|ref|YP_003648724.1| acyl-CoA dehydrogenase domain-containing protein [Tsukamurella 
paurometabola DSM 20162]
 gi|296029615|gb|ADG80385.1| acyl-CoA dehydrogenase domain protein [Tsukamurella paurometabola 
DSM 20162]
Length=360

 Score =  267 bits (683),  Expect = 2e-69, Method: Compositional matrix adjust.
 Identities = 164/372 (45%), Positives = 219/372 (59%), Gaps = 20/372 (5%)

Query  1    MDFTTTEAAQDLGGLVDTIVDAVCTPEHQRELDKLEQRFDRELWRKLIDAGILSSAAPES  60
            MDFT  EA  DL  L  +I +  C+ ++    D     FDRE+W  L  +GIL +A P +
Sbjct  1    MDFTVPEAEADLAALTRSIAEG-CSAKNPLPGDS---GFDREVWSTLARSGILDAALPTT  56

Query  61   LGGDGFGVLEQVAVLVALGHQLAAVPYLESVVLAAGALARFGSPELQQGWGVSAVSGDRI  120
            +GG G G+    AVL  LG  +A  PYL+++++ A  +  +G+P   + W V  + G+  
Sbjct  57   VGGGGLGLTAHAAVLTELGRTVAPAPYLDTILVGAETIIAYGTPAQIERWAVPVLRGEDT  116

Query  121  LTVAL-DGEMGEGPVQAAGTGHGYRLTGTRTQVGYGPVADAFLVPAETDSGAAVFLVAAG  179
            + V   D   G     A  T  G+RL G +T V     AD  L+ A T  G+A+FLV   
Sbjct  117  VAVVFGDDHTG---FTATVTTDGWRLNGAQTAVSSAAFADTLLIEATTPEGSALFLVPRD  173

Query  180  DPGVAVTALATTGLGSVGHLELNGAKVDAARRVGGTDVAVWLGTLSTLSRTAFQLGVLER  239
              G+++T            +E     + +  R+ G D       L+T+   A+Q GV ER
Sbjct  174  AKGISITRQHVVNGTDTALVEAAAVPLASDARLAGGDAPTRARRLATIGWCAWQAGVTER  233

Query  240  GLQMTAEYARTREQFDRPIGSFQAVGQRLADGYIDVKGLRLTLTQAAWRVAE--DSLASR  297
             L++TA+YARTREQF +PIGSFQAV QRLAD YIDV+ +RLT  +AAWR +E  D++A  
Sbjct  234  ALELTADYARTREQFGKPIGSFQAVRQRLADAYIDVEAVRLTALEAAWRESEGLDAVA--  291

Query  298  ECPQPADIDVATAGFWAAEAGHRVAHTIVHVHGGVGVDTDHPVHRYFLAAKQTEFALGGA  357
                    ++ATA FWAAEAGHRVAHT VHVHGGVG+DTDHP HRYF+AAK+ EFALGGA
Sbjct  292  --------EIATAKFWAAEAGHRVAHTAVHVHGGVGIDTDHPTHRYFVAAKRAEFALGGA  343

Query  358  TGQLRRIGRELA  369
            T  LR +G  LA
Sbjct  344  TAHLRALGAVLA  355


>gi|262203815|ref|YP_003275023.1| acyl-CoA dehydrogenase domain-containing protein [Gordonia bronchialis 
DSM 43247]
 gi|262087162|gb|ACY23130.1| acyl-CoA dehydrogenase domain protein [Gordonia bronchialis DSM 
43247]
Length=378

 Score =  265 bits (678),  Expect = 8e-69, Method: Compositional matrix adjust.
 Identities = 172/381 (46%), Positives = 209/381 (55%), Gaps = 11/381 (2%)

Query  1    MDFTTTEAAQDLGGLVDTIVDAVCTPEHQRELDKLEQRFDRELWRKLIDAGIL----SSA  56
            MDFT  E A D+ GL   I   + T +   EL+  +   D +LWR+L  AG+L    SSA
Sbjct  1    MDFTLPETASDVRGLARDIATKISTDDRIAELEHNDAPLDTDLWRELGAAGLLGLELSSA  60

Query  57   APESLGGDGFGVLEQVAVLVALGHQLAAVPYLESVVLAAGALARFGSPELQQGWGVSAVS  116
                 GGD    +E   V   LG  LA VP+    + A   LA  G  EL++    +A +
Sbjct  61   VAGDSGGD-LTAIENCGVAEELGRHLARVPFGPHALAALPVLAERGRDELRERLLGAAAA  119

Query  117  GDRILTVALDGEMGEGPVQAAGTGHGYR---LTGTRTQVGYGPVADAFLVPAETDSGAAV  173
            G  +LTVA + ++G G  +   T        L G +  V YG  AD FLV A   SG   
Sbjct  120  GTIVLTVAFEEDLGAGATEPGATLSADDVPVLRGAKVNVPYGIAADVFLVNATGPSGTVA  179

Query  174  FLVAAGDPGVAVTALATTGLGSVGHLELNGAKVDAARRV-GGTDVAVWLGTLSTLSRTAF  232
              V A DPGV VT   +TGL     ++     V A R + GG D    +    TL+  A 
Sbjct  180  VAVFADDPGVRVTPTTSTGLVPTAEVDFTDVPVSADRILSGGADTVADISDRLTLAVCAE  239

Query  233  QLGVLERGLQMTAEYARTREQFDRPIGSFQAVGQRLADGYIDVKGLRLTLTQAAWRVAED  292
            Q G++ R L++TAEYAR REQF R IGSFQAV QRLADGYID + L LT TQAAW +A  
Sbjct  240  QSGIVSRALELTAEYAREREQFGRAIGSFQAVAQRLADGYIDAQALSLTTTQAAWLLA--  297

Query  293  SLASRECPQPADIDVATAGFWAAEAGHRVAHTIVHVHGGVGVDTDHPVHRYFLAAKQTEF  352
            +  +          +ATA FWAAEAGHRVAHT VHVHGGVG+DT HPVHRYFL AKQ EF
Sbjct  298  NAGADTADSELHTAIATAKFWAAEAGHRVAHTTVHVHGGVGLDTSHPVHRYFLRAKQNEF  357

Query  353  ALGGATGQLRRIGRELAETPA  373
              G     LR IG  LA TPA
Sbjct  358  TAGNVPATLRTIGAALAATPA  378


>gi|302525555|ref|ZP_07277897.1| pimeloyl-CoA dehydrogenase, small subunit [Streptomyces sp. AA4]
 gi|302434450|gb|EFL06266.1| pimeloyl-CoA dehydrogenase, small subunit [Streptomyces sp. AA4]
Length=342

 Score =  256 bits (655),  Expect = 3e-66, Method: Compositional matrix adjust.
 Identities = 171/372 (46%), Positives = 213/372 (58%), Gaps = 32/372 (8%)

Query  1    MDFTTTEAAQDLGGLVDTIVDAVCTPEHQRELDKLEQRFDRELWRKLIDAGILSSAAPES  60
            MDF+ TEA  DL  L   I+    T E           FD  LW  L  +G+L +A P +
Sbjct  1    MDFSLTEAQNDLAALTRRILTDQVTAESLGPHGS--GGFDAPLWTTLARSGVLDAALPAT  58

Query  61   LGGDGFGVLEQVAVLVALGHQLAAVPYLESVVLAAGALARFGSPELQQGWGVSAVSGDRI  120
            +GG GFG+LEQ +VL+ +G  +A VPYL SVV A   L     P L + W +    G  +
Sbjct  59   VGGGGFGLLEQCSVLIEIGRAVAPVPYLSSVVQAGSVLT---DPLLAERWLLPVSRGKAV  115

Query  121  LTVALDGEMGEGPVQAAGTGHGYRLTGTRTQVGYGPVADAFLVPAETDSGAAVFLVAAGD  180
            L +AL G        AA  G   RLTGT+T V +   ADA LV  E + G  V++V    
Sbjct  116  LAIALGGSF------AASAG---RLTGTQTAVPFAAFADALLV--EANDG--VYIVEKDA  162

Query  181  PGVAVTALATTGLGSVGHLELNGAKVDAARRVGGTDVAVWLGTLSTLSRTAFQLGVLERG  240
             GV++ A +TT      H +     +     V   DV   L    TL   A QLGVLER 
Sbjct  163  AGVSIEAQSTTD-----HADAALVTLSDTPGVALGDVGEQLRLRGTLGACAQQLGVLERA  217

Query  241  LQMTAEYARTREQFDRPIGSFQAVGQRLADGYIDVKGLRLTLTQAAWRVAEDSLASRECP  300
            L++TA Y R R+QFD+ +GSFQAV  RLAD YIDV+ +RLTL QAAW++AE         
Sbjct  218  LELTAAYTRERKQFDKVLGSFQAVRHRLADAYIDVEAVRLTLWQAAWKLAEG--------  269

Query  301  QPADIDVATAGFWAAEAGHRVAHTIVHVHGGVGVDTDHPVHRYFLAAKQTEFALGGATGQ  360
             PA  D+ATA FWAAEAGHRVAHT VH+HGGVG+D +HPVHRYF AAK+ EF  GGAT Q
Sbjct  270  LPAAEDIATAKFWAAEAGHRVAHTAVHLHGGVGIDVEHPVHRYFAAAKRLEFTSGGATEQ  329

Query  361  LRRIGRELAETP  372
            L  +G EL  +P
Sbjct  330  LLGLG-ELVVSP  340


>gi|326383103|ref|ZP_08204792.1| acyl-CoA dehydrogenase domain-containing protein [Gordonia neofelifaecis 
NRRL B-59395]
 gi|326198239|gb|EGD55424.1| acyl-CoA dehydrogenase domain-containing protein [Gordonia neofelifaecis 
NRRL B-59395]
Length=370

 Score =  246 bits (628),  Expect = 5e-63, Method: Compositional matrix adjust.
 Identities = 171/369 (47%), Positives = 206/369 (56%), Gaps = 10/369 (2%)

Query  1    MDFTTTEAAQDLGGLVDTIVDAVCTPEHQRELDKLEQRFDRELWRKLIDAGILSSAAPES  60
            MDFT TEAA DL  L   IVD +   E   EL+      D+ LW +L  AG+L  AAPES
Sbjct  1    MDFTPTEAATDLQKLTADIVDRISPAERVAELESDRAPIDQRLWSELAGAGLLGLAAPES  60

Query  61   LGGDGFGVLEQVAVLVALGHQLAAVPYLESVVLAAGALARFGSPELQQGWGVSAVSGDRI  120
              G     LE VAV   LG  LA VP+    +     LA   S +L+     +AV+G+++
Sbjct  61   ADGADLTTLETVAVATELGRGLARVPFGPHALAGVPLLAAHASDDLRSALLAAAVAGEKV  120

Query  121  LTVAL--DGEMGEGPVQAAGTGHGYRLTGTRTQVGYGPVADAFLVPAETDSGAAVFLVAA  178
            LT A+  DG       +      G  LTG +  V +   AD  LV A   +G  +  V A
Sbjct  121  LTAAVEEDGNFDAAAPRTVLDDAG--LTGVKVNVPFAAAADVLLVVAAGSAGPVLAAVPA  178

Query  179  GDPGVAVTALATTGLGSVGHLELNGAKVDAARRV--GGTDVAVWLGTLSTLSRTAFQLGV  236
              PGV +T    TGL  V  +E +G  V     +  G   VA  L  L  L+ +A Q G 
Sbjct  179  DRPGVTITESVATGLTPVYLVEFDGVDVAPTEILDGGAATVAQALDLLR-LAVSADQAGT  237

Query  237  LERGLQMTAEYARTREQFDRPIGSFQAVGQRLADGYIDVKGLRLTLTQAAWRVAEDSLAS  296
            +   L  TAEYAR REQF+RPIGSFQAV QRLADGYIDV+ L LT+TQAAW ++   LA 
Sbjct  238  VAAALDATAEYAREREQFNRPIGSFQAVAQRLADGYIDVQALSLTVTQAAWLLS--GLAE  295

Query  297  RECPQPADIDVATAGFWAAEAGHRVAHTIVHVHGGVGVDTDHPVHRYFLAAKQTEFALGG  356
             E  +     V TA FWAAEAGHRVAHT VHVHGGVG+DT HPVHRYFL AKQ EF LG 
Sbjct  296  TEDGE-TTAAVETAKFWAAEAGHRVAHTTVHVHGGVGLDTSHPVHRYFLRAKQNEFTLGS  354

Query  357  ATGQLRRIG  365
            A   L  +G
Sbjct  355  APVVLDELG  363


>gi|311744219|ref|ZP_07718023.1| acyl-CoA dehydrogenase [Aeromicrobium marinum DSM 15272]
 gi|311312392|gb|EFQ82305.1| acyl-CoA dehydrogenase [Aeromicrobium marinum DSM 15272]
Length=365

 Score =  246 bits (627),  Expect = 5e-63, Method: Compositional matrix adjust.
 Identities = 171/382 (45%), Positives = 210/382 (55%), Gaps = 26/382 (6%)

Query  1    MDFTTTEAAQDLGGLVDTIVDAVCTPEHQRELDKLEQRFDRELWRKLIDAGILSSAAPES  60
            MDFT +  A D   L  TI+    T +     +   +RFD  LW+ L DAG+L+   PE 
Sbjct  1    MDFTFSPEADDAAALAATILGDHTTSDRLAAAEATGRRFDPVLWKALADAGLLTLTTPED  60

Query  61   LGGDGFGVLEQVAVLVALGHQLAAVPYLESVVLAAGALARF-----GSPELQQGWGVSAV  115
             GG G G +E   VLV +G  +A VP      LA  A+AR      G+P+  +       
Sbjct  61   DGGAGLGFVELCRVLVEVGRTVAPVP------LATNAVARLLVVEHGTPDQLRTLHADPA  114

Query  116  SGDRILTVALDGEMGEGP----VQAAGTGHGYRLTGTRTQVGYGPVADAFLVPAETDSGA  171
            +   + T A+  E    P      AA    G+ LTGT+  V  G VA +FLV A T  G 
Sbjct  115  A---VTTCAVAEEHEHAPRRPTTTAAPADDGWVLTGTKYLVPAGTVATSFLVSATTPDGP  171

Query  172  AVFLVAAGDPGVAVTALATTGLGSVGHLELNGAKVDAARRVGGTDVAVWLGTLSTLSRTA  231
            AV LV  GD GV+V    T+     G LEL+  ++ A R VGG   A  L  L  ++  A
Sbjct  172  AVLLVHTGDTGVSVAEQRTSDGDEAGLLELDAVRLPADRLVGGAGAADRLLDLLAVATCA  231

Query  232  FQLGVLERGLQMTAEYARTREQFDRPIGSFQAVGQRLADGYIDVKGLRLTLTQAAWRVAE  291
             QLG+ E  L +TAEYARTREQFDRPIG+FQAV QRLADGYID +   LTL QAAWR+AE
Sbjct  232  LQLGITEGALALTAEYARTREQFDRPIGTFQAVAQRLADGYIDTRCQALTLWQAAWRLAE  291

Query  292  DSLASRECPQPADIDVATAGFWAAEAGHRVAHTIVHVHGGVGVDTDHPVHRYFLAAKQTE  351
                      PA   VATA  WA+EAGHRVAHT VHVHGGVG+D D   HRY+ AA +  
Sbjct  292  Q--------LPAAEAVATATLWASEAGHRVAHTTVHVHGGVGIDVDGVAHRYYTAAMRFG  343

Query  352  FALGGATGQLRRIGRELAETPA  373
               GG T Q   +GR LA+ PA
Sbjct  344  AVRGGGTEQALHLGRLLADAPA  365


>gi|300784328|ref|YP_003764619.1| acyl-CoA dehydrogenase [Amycolatopsis mediterranei U32]
 gi|299793842|gb|ADJ44217.1| acyl-CoA dehydrogenase [Amycolatopsis mediterranei U32]
 gi|340525748|gb|AEK40953.1| acyl-CoA dehydrogenase [Amycolatopsis mediterranei S699]
Length=340

 Score =  245 bits (626),  Expect = 7e-63, Method: Compositional matrix adjust.
 Identities = 169/360 (47%), Positives = 204/360 (57%), Gaps = 32/360 (8%)

Query  1    MDFTTTEAAQDLGGLVDTIVDAVCTPEHQRELDKLEQRFDRELWRKLIDAGILSSAAPES  60
            MDFT +EA+ DL  L   ++    T +           FD   W  L  AG+L +A P S
Sbjct  1    MDFTLSEASGDLAALTRRLLADKATHDPHG-----TGGFDTAAWTALGQAGVLDAALPSS  55

Query  61   LGGDGFGVLEQVAVLVALGHQLAAVPYLESVVLAAGALARFGSPELQQGWGVSAVSGDRI  120
            LGG GFG+LEQ AVL  +G  +AAVPYL S+ +AA ALA FGSPEL   W +  + G+R+
Sbjct  56   LGGGGFGLLEQCAVLTEIGRAVAAVPYLPSITMAAAALAEFGSPELVDRWVLPVLRGERV  115

Query  121  LTVALDGEMGEGPVQAAGTGHGYRLTGTRTQVGYGPVADAFLVPAETDSGAAVFLVAAGD  180
            L VAL G           T    R++G +T V +   A  FLV A  +    VFLV A  
Sbjct  116  LAVALSG----------FTASDGRVSGAQTAVPFAAFAHGFLVAASDE----VFLVDAAA  161

Query  181  PGVAVTALATTGLGSVGHLELNGAKVDAARRVGGTDVAVWLGTLSTLSRTAFQLGVLERG  240
             GV+V    T      G L L+         V   D+  WL    T    A QLGV+ER 
Sbjct  162  AGVSVQPQQTVDHADAGLLSLSEVP-----GVSLGDIGEWLRLRGTAGVCAQQLGVVERA  216

Query  241  LQMTAEYARTREQFDRPIGSFQAVGQRLADGYIDVKGLRLTLTQAAWRVAEDSLASRECP  300
            L++TA YA  R+QFD  IG FQAV QRLAD Y+DV+ +RLT  QAAW++  D        
Sbjct  217  LELTAAYAAERKQFDHVIGGFQAVRQRLADAYLDVEAVRLTTLQAAWQLTSDV-------  269

Query  301  QPADIDVATAGFWAAEAGHRVAHTIVHVHGGVGVDTDHPVHRYFLAAKQTEFALGGATGQ  360
             PA   VATA FWAAEAGHRVAHT VHVHGGVG+D DH VHRYF AAK+ EF LG AT Q
Sbjct  270  -PAAEAVATAKFWAAEAGHRVAHTAVHVHGGVGIDVDHVVHRYFTAAKRLEFQLGPATHQ  328


>gi|254822253|ref|ZP_05227254.1| hypothetical protein MintA_20129 [Mycobacterium intracellulare 
ATCC 13950]
Length=369

 Score =  236 bits (601),  Expect = 6e-60, Method: Compositional matrix adjust.
 Identities = 151/374 (41%), Positives = 195/374 (53%), Gaps = 12/374 (3%)

Query  1    MDFTTTEAAQDLGGLVDTIVDAVCTPEHQRELDKLEQRFDRELWRKLIDAGILSSAAPES  60
            MDF+ TE  + +G +   + +   T EH  EL+  E RFD  LWR+L  + +L  A PES
Sbjct  1    MDFSFTEEQETVGKVARQLFEHRATTEHLTELESGEIRFDPALWRELAASDLLGIALPES  60

Query  61   LGGDGFGVLEQVAVLVALGHQLAAVPYLESVVLAAGALARFGSPELQQGWGVSAVSGDRI  120
            +GG G   L+   +L  +G  +A VP   ++VL A  +AR G    Q+ +    V G  I
Sbjct  61   VGGSGGSFLDLGVLLAEVGWSVAPVPVYATLVLGADTIARHGDSTTQRRYLPKVVDGSTI  120

Query  121  LTVALDGEMGEGPVQAAGT----GHGYRLTGTRTQVGYGPVADAFLVPAETDSGAAVFLV  176
            LT AL       P     T    G  + L G +  V    +ADA +V A  D G  +F+V
Sbjct  121  LTAALAEPGSSDPAAPRTTARPEGDAWILDGVKELVPAAQLADAIVVSARADDGPGLFVV  180

Query  177  AAGDPGVAVTALATTGLGSVGHLELNGAKVDAARRVGGTDVAVWLGTLSTLSRTAFQLGV  236
                 GV VT   TT       +E  GA        GG D    L T + +   A Q+GV
Sbjct  181  ETATEGVVVTPAETTNGEPYADVEFAGAVAHRLNEAGGRDAVDSLYTRALVGLCAMQVGV  240

Query  237  LERGLQMTAEYARTREQFDRPIGSFQAVGQRLADGYIDVKGLRLTLTQAAWRVAEDSLAS  296
             ER L++ A Y   REQF RPIGSFQAV QRLAD +IDV+ +R T   AAW +AE   A+
Sbjct  241  TERALKIAASYTGEREQFGRPIGSFQAVQQRLADAFIDVEAIRWTTWHAAWLIAEGRPAA  300

Query  297  RECPQPADIDVATAGFWAAEAGHRVAHTIVHVHGGVGVDTDHPVHRYFLAAKQTEFALGG  356
            RE         A A FWAAEAG RV  +   VHGG+G+D  +P+HRYFL AKQ E +LG 
Sbjct  301  REA--------AIAKFWAAEAGARVVASAQQVHGGMGIDVTYPLHRYFLWAKQIELSLGS  352

Query  357  ATGQLRRIGRELAE  370
            A  QL R+G    E
Sbjct  353  APQQLARLGATYPE  366


>gi|254774653|ref|ZP_05216169.1| hypothetical protein MaviaA2_08278 [Mycobacterium avium subsp. 
avium ATCC 25291]
Length=369

 Score =  234 bits (598),  Expect = 1e-59, Method: Compositional matrix adjust.
 Identities = 151/374 (41%), Positives = 195/374 (53%), Gaps = 12/374 (3%)

Query  1    MDFTTTEAAQDLGGLVDTIVDAVCTPEHQRELDKLEQRFDRELWRKLIDAGILSSAAPES  60
            MDF+ TE  + +G +   + +   T EH  EL+  E RFD  LWR+L  + +L  A PES
Sbjct  1    MDFSFTEEQETVGKVARQLFEHRATTEHLTELESGEIRFDPALWRELAASDLLGIALPES  60

Query  61   LGGDGFGVLEQVAVLVALGHQLAAVPYLESVVLAAGALARFGSPELQQGWGVSAVSGDRI  120
            +GG G   L+   +L  +G  +A VP   ++VL A  +AR G    Q+ +    V G  I
Sbjct  61   VGGSGGSFLDLGVLLAEVGWSVAPVPVYATLVLGADTIARHGDSTTQRRYLPKVVDGSTI  120

Query  121  LTVALDGEMGEGPVQAAGT----GHGYRLTGTRTQVGYGPVADAFLVPAETDSGAAVFLV  176
            LT AL       P     T    G  + L G +  V    +ADA +V A  D G  +F+V
Sbjct  121  LTAALAEPGSSDPAAPRTTARPDGDAWILDGVKELVPAAQLADAIVVSARADDGPGLFVV  180

Query  177  AAGDPGVAVTALATTGLGSVGHLELNGAKVDAARRVGGTDVAVWLGTLSTLSRTAFQLGV  236
                 GV VT   TT       +E  GA        GG D    L T + +   A Q+GV
Sbjct  181  ETATEGVVVTPAITTNGEPYADVEFAGAVALRLNEAGGRDAVDSLYTRALVGLCAMQVGV  240

Query  237  LERGLQMTAEYARTREQFDRPIGSFQAVGQRLADGYIDVKGLRLTLTQAAWRVAEDSLAS  296
             ER L++ A Y   REQF RPIGSFQAV QRLAD +IDV+ +R T   AAW +AE   A+
Sbjct  241  TERALKIAASYTGEREQFGRPIGSFQAVQQRLADAFIDVEAIRWTTWHAAWLIAEGRPAA  300

Query  297  RECPQPADIDVATAGFWAAEAGHRVAHTIVHVHGGVGVDTDHPVHRYFLAAKQTEFALGG  356
            RE         A A FWAAEAG RV  +   VHGG+G+D  +P+HRYFL AKQ E +LG 
Sbjct  301  REA--------AIAKFWAAEAGARVVASAQQVHGGMGIDVTYPLHRYFLWAKQIELSLGS  352

Query  357  ATGQLRRIGRELAE  370
            A  QL R+G    E
Sbjct  353  APQQLARLGATYPE  366


>gi|342857582|ref|ZP_08714238.1| hypothetical protein MCOL_01860 [Mycobacterium colombiense CECT 
3035]
 gi|342134915|gb|EGT88081.1| hypothetical protein MCOL_01860 [Mycobacterium colombiense CECT 
3035]
Length=372

 Score =  232 bits (592),  Expect = 7e-59, Method: Compositional matrix adjust.
 Identities = 153/377 (41%), Positives = 209/377 (56%), Gaps = 15/377 (3%)

Query  1    MDFTTTEAAQDLGGLVDTIVDAVCTPEHQRELDKLEQRFDRELWRKLIDAGILSSAAPES  60
            MDF+ TE  + +G +   + +   TPEH  +L+  E R+DR LWR+L  + +L  A PE+
Sbjct  1    MDFSFTEEQETVGKVARQLFEHRATPEHLTDLESGEHRYDRALWRELASSDLLGIALPEA  60

Query  61   LGGDGFGVLEQVAVLVALGHQLAAVPYLESVVLAAGALARFGSPELQQGWGVSAVSGDRI  120
            +GG G   L+   +L  +G  +A VP   ++VL A  +AR G   +QQ +    V GD I
Sbjct  61   VGGSGGSFLDLGVLLAEVGWSVAPVPVYATLVLGADTIARHGDSSIQQRYLPRVVDGDAI  120

Query  121  LTVALDGEMGEGPVQ----AAGTGHGYRLTGTRTQVGYGPVADAFLVPAETDSGAAVFLV  176
            LT AL       P      A   G  + LTG +  V    +A+A +V A+ D G  +++V
Sbjct  121  LTAALAEPGNSDPAAPRTIARADGDAWNLTGAKELVPAAQLAEAIVVSAQADDGPGLYVV  180

Query  177  --AAGDP-GVAVTALATTGLGSVGHLELNGAKVDAARRVGGTDVAVWLGTLSTLSRTAFQ  233
              A+GD  GV V++++TT       +E  GA        GG D    L T + L   A Q
Sbjct  181  DTASGDNNGVVVSSVSTTNGEPYADVEFAGAIGHRLTGTGGPDAVSSLYTRALLGLCAMQ  240

Query  234  LGVLERGLQMTAEYARTREQFDRPIGSFQAVGQRLADGYIDVKGLRLTLTQAAWRVAEDS  293
            +GV ER L++ A Y   REQF RP+GSFQAV QRLAD +IDV+ +R T   AAW +AE  
Sbjct  241  VGVTERALKIAATYTSQREQFGRPVGSFQAVQQRLADAFIDVEAIRWTTWHAAWLIAEAR  300

Query  294  LASRECPQPADIDVATAGFWAAEAGHRVAHTIVHVHGGVGVDTDHPVHRYFLAAKQTEFA  353
             A+RE         A A FWAAEAG RV  +   VHGG+G+D  +P+HRYFL AKQ E +
Sbjct  301  PAAREA--------AIAKFWAAEAGARVVASAQQVHGGMGIDVTYPLHRYFLWAKQIELS  352

Query  354  LGGATGQLRRIGRELAE  370
            LG A  QL R+G   +E
Sbjct  353  LGSAPQQLARLGAAYSE  369


>gi|296170096|ref|ZP_06851696.1| acyl-CoA dehydrogenase domain protein [Mycobacterium parascrofulaceum 
ATCC BAA-614]
 gi|295895238|gb|EFG74950.1| acyl-CoA dehydrogenase domain protein [Mycobacterium parascrofulaceum 
ATCC BAA-614]
Length=389

 Score =  228 bits (582),  Expect = 9e-58, Method: Compositional matrix adjust.
 Identities = 159/371 (43%), Positives = 211/371 (57%), Gaps = 12/371 (3%)

Query  1    MDFTTTEAAQDLGGLVDTIVDAVCTPEHQRELDKLEQRFDRELWRKLIDAGILSSAAPES  60
            MDF  TE  + +  L   + +   TPE   EL+  + RFD  LWR+L  A +L +A PE 
Sbjct  1    MDFAFTEEQETISKLARDLFEHRATPERLTELEAGDVRFDDALWRELAAADLLGTALPEP  60

Query  61   LGGDGFGVLEQVAVLVALGHQLAAVPYLESVVLAAGALARFGSPELQQGWGVSAVSGDRI  120
            +GG+G G +E   +L  +G  +A VP   ++ L A  +AR G+ E +Q +     +GDRI
Sbjct  61   VGGNGGGFVELGVLLAEVGRAVAPVPAYATLALGADPIARHGNDEQRQRFLPGVATGDRI  120

Query  121  LTVALDGEMGEGPVQAAGT-----GHGYRLTGTRTQVGYGPVADAFLVPAETDSG-AAVF  174
            LT  L  E G   + A  T     G  +RL G +  V    +AD  L+PA  + G   +F
Sbjct  121  LTAGL-AEPGRSGLTAPATTARRDGGQWRLDGAKELVPAAQLADTVLIPASMEDGEVGLF  179

Query  175  LVAAGDPGVAVTALATTGLGSVGHLELNGAKVDAARRVGGTDVAVWLGTLSTLSRTAFQL  234
            L+AA   GV +   ATT       + L+GA V  A R+ G D+A  L T + ++  A QL
Sbjct  180  LLAADARGVEIRPAATTNREPHADVYLDGAAVSDADRLIGPDLAESLHTRALVALCAVQL  239

Query  235  GVLERGLQMTAEYARTREQFDRPIGSFQAVGQRLADGYIDVKGLRLTLTQAAWRVAEDSL  294
            GV ER L++ AEY   REQF RPIGSFQAV QR+AD YIDV+ +R T   AAW +A    
Sbjct  240  GVAERALRIAAEYTTGREQFGRPIGSFQAVQQRMADAYIDVEAIRWTTWHAAWLIAHGRP  299

Query  295  ASRECPQPADIDVATAGFWAAEAGHRVAHTIVHVHGGVGVDTDHPVHRYFLAAKQTEFAL  354
             + E  + A I    A FWAAEAG RVA T  HVHGG+G+DT +P+HRYFL AK  E  L
Sbjct  300  LT-EAGRAARI----AKFWAAEAGARVAATAQHVHGGIGIDTTYPLHRYFLWAKHNELTL  354

Query  355  GGATGQLRRIG  365
            G AT QL ++G
Sbjct  355  GPATVQLAQLG  365



Lambda     K      H
   0.318    0.135    0.397 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 712818967600


  Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
    Posted date:  Sep 5, 2011  4:36 AM
  Number of letters in database: 5,219,829,388
  Number of sequences in database:  15,229,318



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40