BLAST Search Results


BLASTP 2.2.25+


Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.



Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
           15,229,318 sequences; 5,219,829,388 total letters



Query= Rv3517

Length=279
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

gi|15610653|ref|NP_218034.1|  hypothetical protein Rv3517 [Mycoba...   553    8e-156
gi|289755646|ref|ZP_06515024.1|  conserved hypothetical protein [...   550    7e-155
gi|289445109|ref|ZP_06434853.1|  conserved hypothetical protein [...   550    1e-154
gi|289763695|ref|ZP_06523073.1|  conserved hypothetical protein [...   529    2e-148
gi|289572169|ref|ZP_06452396.1|  conserved hypothetical protein [...   499    2e-139
gi|15843127|ref|NP_338164.1|  hypothetical protein MT3618 [Mycoba...   427    1e-117
gi|254822601|ref|ZP_05227602.1|  hypothetical protein MintA_21909...   381    7e-104
gi|240172349|ref|ZP_04751008.1|  hypothetical protein MkanA1_2374...   376    3e-102
gi|254773599|ref|ZP_05215115.1|  hypothetical protein MaviaA2_028...   372    3e-101
gi|118463860|ref|YP_879922.1|  hypothetical protein MAV_0642 [Myc...   370    1e-100
gi|108801592|ref|YP_641789.1|  hypothetical protein Mmcs_4629 [My...   367    1e-99 
gi|126437575|ref|YP_001073266.1|  hypothetical protein Mjls_5011 ...   367    1e-99 
gi|41406646|ref|NP_959482.1|  hypothetical protein MAP0548c [Myco...   353    2e-95 
gi|118470374|ref|YP_890143.1|  hypothetical protein MSMEG_5917 [M...   333    1e-89 
gi|108797077|ref|YP_637274.1|  hypothetical protein Mmcs_0096 [My...   324    7e-87 
gi|315445583|ref|YP_004078462.1|  hypothetical protein Mspyr1_404...   311    5e-83 
gi|145225286|ref|YP_001135964.1|  hypothetical protein Mflv_4708 ...   310    1e-82 
gi|296166568|ref|ZP_06848998.1|  conserved hypothetical protein [...   308    4e-82 
gi|15840943|ref|NP_335980.1|  hypothetical protein MT1529 [Mycoba...   302    4e-80 
gi|31792677|ref|NP_855170.1|  hypothetical protein Mb1518c [Mycob...   302    5e-80 
gi|254775741|ref|ZP_05217257.1|  hypothetical protein MaviaA2_138...   301    5e-80 
gi|340626497|ref|YP_004744949.1|  hypothetical protein MCAN_14991...   301    7e-80 
gi|326903108|gb|EGE50041.1|  hypothetical protein TBPG_00972 [Myc...   301    8e-80 
gi|118462694|ref|YP_882478.1|  hypothetical protein MAV_3296 [Myc...   300    1e-79 
gi|289447085|ref|ZP_06436829.1|  conserved hypothetical protein [...   300    2e-79 
gi|118471729|ref|YP_889877.1|  hypothetical protein MSMEG_5643 [M...   299    3e-79 
gi|254231713|ref|ZP_04925040.1|  conserved hypothetical protein [...   296    2e-78 
gi|126432699|ref|YP_001068390.1|  hypothetical protein Mjls_0086 ...   296    3e-78 
gi|296170707|ref|ZP_06852282.1|  conserved hypothetical protein [...   294    9e-78 
gi|118467074|ref|YP_882533.1|  hypothetical protein MAV_3351 [Myc...   294    1e-77 
gi|336457984|gb|EGO36971.1|  hypothetical protein MAPs_16820 [Myc...   293    2e-77 
gi|169628660|ref|YP_001702309.1|  hypothetical protein MAB_1570 [...   292    4e-77 
gi|333991682|ref|YP_004524296.1|  hypothetical protein JDM601_304...   292    4e-77 
gi|254775793|ref|ZP_05217309.1|  hypothetical protein MaviaA2_141...   291    9e-77 
gi|2183264|gb|AAC46200.1|  MAV346 [Mycobacterium avium]                286    2e-75 
gi|254773579|ref|ZP_05215095.1|  hypothetical protein MaviaA2_027...   277    1e-72 
gi|240172475|ref|ZP_04751134.1|  hypothetical protein MkanA1_2438...   275    6e-72 
gi|41406626|ref|NP_959462.1|  hypothetical protein MAP0528 [Mycob...   275    8e-72 
gi|336458416|gb|EGO37390.1|  hypothetical protein MAPs_13110 [Myc...   272    4e-71 
gi|342862365|ref|ZP_08719005.1|  hypothetical protein MCOL_25858 ...   269    3e-70 
gi|108801239|ref|YP_641436.1|  hypothetical protein Mmcs_4275 [My...   266    2e-69 
gi|308231722|ref|ZP_07413558.2|  hypothetical protein TMAG_03890 ...   264    1e-68 
gi|15840508|ref|NP_335545.1|  hypothetical protein MT1103 [Mycoba...   263    2e-68 
gi|15608213|ref|NP_215589.1|  hypothetical protein Rv1073 [Mycoba...   263    2e-68 
gi|289744813|ref|ZP_06504191.1|  conserved hypothetical protein [...   263    3e-68 
gi|340626084|ref|YP_004744536.1|  hypothetical protein MCAN_10791...   262    4e-68 
gi|126437298|ref|YP_001072989.1|  hypothetical protein Mjls_4733 ...   261    1e-67 
gi|108801117|ref|YP_641314.1|  hypothetical protein Mmcs_4153 [My...   259    3e-67 
gi|126437219|ref|YP_001072910.1|  hypothetical protein Mjls_4654 ...   259    4e-67 
gi|336458035|gb|EGO37022.1|  hypothetical protein MAPs_17330 [Myc...   259    4e-67 


>gi|15610653|ref|NP_218034.1| hypothetical protein Rv3517 [Mycobacterium tuberculosis H37Rv]
 gi|31794692|ref|NP_857185.1| hypothetical protein Mb3546 [Mycobacterium bovis AF2122/97]
 gi|121639435|ref|YP_979659.1| hypothetical protein BCG_3580 [Mycobacterium bovis BCG str. Pasteur 
1173P2]
 66 more sequence titles
 gi|148663380|ref|YP_001284903.1| hypothetical protein MRA_3556 [Mycobacterium tuberculosis H37Ra]
 gi|148824723|ref|YP_001289477.1| hypothetical protein TBFG_13550 [Mycobacterium tuberculosis F11]
 gi|167969127|ref|ZP_02551404.1| hypothetical protein MtubH3_14285 [Mycobacterium tuberculosis 
H37Ra]
 gi|224991932|ref|YP_002646621.1| hypothetical protein JTY_3581 [Mycobacterium bovis BCG str. Tokyo 
172]
 gi|253800558|ref|YP_003033559.1| hypothetical protein TBMG_03556 [Mycobacterium tuberculosis KZN 
1435]
 gi|254366084|ref|ZP_04982128.1| conserved hypothetical protein [Mycobacterium tuberculosis str. 
Haarlem]
 gi|254552622|ref|ZP_05143069.1| hypothetical protein Mtube_19610 [Mycobacterium tuberculosis 
'98-R604 INH-RIF-EM']
 gi|289555782|ref|ZP_06444992.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 
605]
 gi|289571756|ref|ZP_06451983.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
 gi|289747354|ref|ZP_06506732.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
 gi|289752230|ref|ZP_06511608.1| conserved hypothetical protein [Mycobacterium tuberculosis T92]
 gi|289759673|ref|ZP_06519051.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
 gi|294993635|ref|ZP_06799326.1| hypothetical protein Mtub2_03781 [Mycobacterium tuberculosis 
210]
 gi|297636187|ref|ZP_06953967.1| hypothetical protein MtubK4_18775 [Mycobacterium tuberculosis 
KZN 4207]
 gi|297733181|ref|ZP_06962299.1| hypothetical protein MtubKR_18915 [Mycobacterium tuberculosis 
KZN R506]
 gi|298526994|ref|ZP_07014403.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A]
 gi|306777867|ref|ZP_07416204.1| hypothetical protein TMAG_00007 [Mycobacterium tuberculosis SUMu001]
 gi|306778398|ref|ZP_07416735.1| hypothetical protein TMBG_02052 [Mycobacterium tuberculosis SUMu002]
 gi|306786421|ref|ZP_07424743.1| hypothetical protein TMCG_03640 [Mycobacterium tuberculosis SUMu003]
 gi|306790785|ref|ZP_07429107.1| hypothetical protein TMDG_01247 [Mycobacterium tuberculosis SUMu004]
 gi|306791108|ref|ZP_07429410.1| hypothetical protein TMEG_00005 [Mycobacterium tuberculosis SUMu005]
 gi|306795895|ref|ZP_07434197.1| hypothetical protein TMFG_01451 [Mycobacterium tuberculosis SUMu006]
 gi|306801141|ref|ZP_07437809.1| hypothetical protein TMHG_02575 [Mycobacterium tuberculosis SUMu008]
 gi|306805353|ref|ZP_07442021.1| hypothetical protein TMGG_01053 [Mycobacterium tuberculosis SUMu007]
 gi|306969646|ref|ZP_07482307.1| hypothetical protein TMIG_03139 [Mycobacterium tuberculosis SUMu009]
 gi|306973985|ref|ZP_07486646.1| hypothetical protein TMJG_00762 [Mycobacterium tuberculosis SUMu010]
 gi|307081694|ref|ZP_07490864.1| hypothetical protein TMKG_00754 [Mycobacterium tuberculosis SUMu011]
 gi|307086304|ref|ZP_07495417.1| hypothetical protein TMLG_00005 [Mycobacterium tuberculosis SUMu012]
 gi|313660511|ref|ZP_07817391.1| hypothetical protein MtubKV_18905 [Mycobacterium tuberculosis 
KZN V2475]
 gi|339633517|ref|YP_004725159.1| hypothetical protein MAF_35290 [Mycobacterium africanum GM041182]
 gi|340628481|ref|YP_004746933.1| hypothetical protein MCAN_35281 [Mycobacterium canettii CIPT 
140010059]
 gi|2924454|emb|CAA17754.1| CONSERVED HYPOTHETICAL PROTEIN [Mycobacterium tuberculosis H37Rv]
 gi|31620289|emb|CAD95732.1| CONSERVED HYPOTHETICAL PROTEIN [Mycobacterium bovis AF2122/97]
 gi|121495083|emb|CAL73569.1| Conserved hypothetical protein [Mycobacterium bovis BCG str. 
Pasteur 1173P2]
 gi|134151596|gb|EBA43641.1| conserved hypothetical protein [Mycobacterium tuberculosis str. 
Haarlem]
 gi|148507532|gb|ABQ75341.1| hypothetical protein MRA_3556 [Mycobacterium tuberculosis H37Ra]
 gi|148723250|gb|ABR07875.1| conserved hypothetical protein [Mycobacterium tuberculosis F11]
 gi|224775047|dbj|BAH27853.1| hypothetical protein JTY_3581 [Mycobacterium bovis BCG str. Tokyo 
172]
 gi|253322061|gb|ACT26664.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 
1435]
 gi|289440414|gb|EFD22907.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 
605]
 gi|289545510|gb|EFD49158.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
 gi|289687882|gb|EFD55370.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
 gi|289692817|gb|EFD60246.1| conserved hypothetical protein [Mycobacterium tuberculosis T92]
 gi|289715237|gb|EFD79249.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
 gi|298496788|gb|EFI32082.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A]
 gi|308213744|gb|EFO73143.1| hypothetical protein TMAG_00007 [Mycobacterium tuberculosis SUMu001]
 gi|308328499|gb|EFP17350.1| hypothetical protein TMBG_02052 [Mycobacterium tuberculosis SUMu002]
 gi|308328912|gb|EFP17763.1| hypothetical protein TMCG_03640 [Mycobacterium tuberculosis SUMu003]
 gi|308332809|gb|EFP21660.1| hypothetical protein TMDG_01247 [Mycobacterium tuberculosis SUMu004]
 gi|308340301|gb|EFP29152.1| hypothetical protein TMEG_00005 [Mycobacterium tuberculosis SUMu005]
 gi|308343566|gb|EFP32417.1| hypothetical protein TMFG_01451 [Mycobacterium tuberculosis SUMu006]
 gi|308348034|gb|EFP36885.1| hypothetical protein TMGG_01053 [Mycobacterium tuberculosis SUMu007]
 gi|308352030|gb|EFP40881.1| hypothetical protein TMHG_02575 [Mycobacterium tuberculosis SUMu008]
 gi|308352817|gb|EFP41668.1| hypothetical protein TMIG_03139 [Mycobacterium tuberculosis SUMu009]
 gi|308356667|gb|EFP45518.1| hypothetical protein TMJG_00762 [Mycobacterium tuberculosis SUMu010]
 gi|308360621|gb|EFP49472.1| hypothetical protein TMKG_00754 [Mycobacterium tuberculosis SUMu011]
 gi|308364236|gb|EFP53087.1| hypothetical protein TMLG_00005 [Mycobacterium tuberculosis SUMu012]
 gi|323717787|gb|EGB26984.1| hypothetical protein TMMG_00003 [Mycobacterium tuberculosis CDC1551A]
 gi|326905357|gb|EGE52290.1| hypothetical protein TBPG_03308 [Mycobacterium tuberculosis W-148]
 gi|328460289|gb|AEB05712.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 
4207]
 gi|339296336|gb|AEJ48447.1| hypothetical protein CCDC5079_3258 [Mycobacterium tuberculosis 
CCDC5079]
 gi|339299937|gb|AEJ52047.1| hypothetical protein CCDC5180_3210 [Mycobacterium tuberculosis 
CCDC5180]
 gi|339332873|emb|CCC28598.1| conserved hypothetical protein [Mycobacterium africanum GM041182]
 gi|340006671|emb|CCC45859.1| conserved hypothetical protein [Mycobacterium canettii CIPT 140010059]
 gi|341603456|emb|CCC66137.1| conserved hypothetical protein [Mycobacterium bovis BCG str. 
Moreau RDJ]
 gi|344221349|gb|AEN01980.1| hypothetical protein MTCTRI2_3581 [Mycobacterium tuberculosis 
CTRI-2]
Length=279

 Score =  553 bits (1426),  Expect = 8e-156, Method: Compositional matrix adjust.
 Identities = 278/279 (99%), Positives = 279/279 (100%), Gaps = 0/279 (0%)

Query  1    VIEPFLGSEAIASGALTRHRLRSAYATIHPDVYVSPGADLTAWSRAQAAWLWSRRRGVIA  60
            +IEPFLGSEAIASGALTRHRLRSAYATIHPDVYVSPGADLTAWSRAQAAWLWSRRRGVIA
Sbjct  1    MIEPFLGSEAIASGALTRHRLRSAYATIHPDVYVSPGADLTAWSRAQAAWLWSRRRGVIA  60

Query  61   GQSAAAMHGAKWVDARQAAELLYDHRRPPAGIHTWSDRVADDEIQPISGMNTTTPARTAL  120
            GQSAAAMHGAKWVDARQAAELLYDHRRPPAGIHTWSDRVADDEIQPISGMNTTTPARTAL
Sbjct  61   GQSAAAMHGAKWVDARQAAELLYDHRRPPAGIHTWSDRVADDEIQPISGMNTTTPARTAL  120

Query  121  DLARRYPVGKAVAAIDALARATDLKLADVEMLAERYRGSRGIRNARIALDLVDPGAESPR  180
            DLARRYPVGKAVAAIDALARATDLKLADVEMLAERYRGSRGIRNARIALDLVDPGAESPR
Sbjct  121  DLARRYPVGKAVAAIDALARATDLKLADVEMLAERYRGSRGIRNARIALDLVDPGAESPR  180

Query  181  ETWLRLLLIRAGFPRPQTQIPVYDEYGQLVAVIDMGWAGIKVGVDYEGDHHRTDRRTFNK  240
            ETWLRLLLIRAGFPRPQTQIPVYDEYGQLVAVIDMGWAGIKVGVDYEGDHHRTDRRTFNK
Sbjct  181  ETWLRLLLIRAGFPRPQTQIPVYDEYGQLVAVIDMGWAGIKVGVDYEGDHHRTDRRTFNK  240

Query  241  DIKRAEALTELGWTDVRVTVEDTEGGIIWRVSAAWQRRT  279
            DIKRAEALTELGWTDVRVTVEDTEGGIIWRVSAAWQRRT
Sbjct  241  DIKRAEALTELGWTDVRVTVEDTEGGIIWRVSAAWQRRT  279


>gi|289755646|ref|ZP_06515024.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
 gi|289696233|gb|EFD63662.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
Length=279

 Score =  550 bits (1418),  Expect = 7e-155, Method: Compositional matrix adjust.
 Identities = 277/279 (99%), Positives = 278/279 (99%), Gaps = 0/279 (0%)

Query  1    VIEPFLGSEAIASGALTRHRLRSAYATIHPDVYVSPGADLTAWSRAQAAWLWSRRRGVIA  60
            +IEPFLGSEAIASGALTRHRLRSAYATIHPDVYVSPGADLTAWSRAQAAWLWSRRRGVIA
Sbjct  1    MIEPFLGSEAIASGALTRHRLRSAYATIHPDVYVSPGADLTAWSRAQAAWLWSRRRGVIA  60

Query  61   GQSAAAMHGAKWVDARQAAELLYDHRRPPAGIHTWSDRVADDEIQPISGMNTTTPARTAL  120
            GQSAAAMHGAKWVDARQAAELLYDHRRP AGIHTWSDRVADDEIQPISGMNTTTPARTAL
Sbjct  61   GQSAAAMHGAKWVDARQAAELLYDHRRPAAGIHTWSDRVADDEIQPISGMNTTTPARTAL  120

Query  121  DLARRYPVGKAVAAIDALARATDLKLADVEMLAERYRGSRGIRNARIALDLVDPGAESPR  180
            DLARRYPVGKAVAAIDALARATDLKLADVEMLAERYRGSRGIRNARIALDLVDPGAESPR
Sbjct  121  DLARRYPVGKAVAAIDALARATDLKLADVEMLAERYRGSRGIRNARIALDLVDPGAESPR  180

Query  181  ETWLRLLLIRAGFPRPQTQIPVYDEYGQLVAVIDMGWAGIKVGVDYEGDHHRTDRRTFNK  240
            ETWLRLLLIRAGFPRPQTQIPVYDEYGQLVAVIDMGWAGIKVGVDYEGDHHRTDRRTFNK
Sbjct  181  ETWLRLLLIRAGFPRPQTQIPVYDEYGQLVAVIDMGWAGIKVGVDYEGDHHRTDRRTFNK  240

Query  241  DIKRAEALTELGWTDVRVTVEDTEGGIIWRVSAAWQRRT  279
            DIKRAEALTELGWTDVRVTVEDTEGGIIWRVSAAWQRRT
Sbjct  241  DIKRAEALTELGWTDVRVTVEDTEGGIIWRVSAAWQRRT  279


>gi|289445109|ref|ZP_06434853.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A]
 gi|289418067|gb|EFD15268.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A]
Length=279

 Score =  550 bits (1416),  Expect = 1e-154, Method: Compositional matrix adjust.
 Identities = 277/279 (99%), Positives = 278/279 (99%), Gaps = 0/279 (0%)

Query  1    VIEPFLGSEAIASGALTRHRLRSAYATIHPDVYVSPGADLTAWSRAQAAWLWSRRRGVIA  60
            +IEPFLGSEAIASGALTRHRLRSAYATIHPDVYVSPGADLTAWSRAQAAWLWSRRRGVIA
Sbjct  1    MIEPFLGSEAIASGALTRHRLRSAYATIHPDVYVSPGADLTAWSRAQAAWLWSRRRGVIA  60

Query  61   GQSAAAMHGAKWVDARQAAELLYDHRRPPAGIHTWSDRVADDEIQPISGMNTTTPARTAL  120
            GQSAAAMHGAKWVDAR AAELLYDHRRPPAGIHTWSDRVADDEIQPISGMNTTTPARTAL
Sbjct  61   GQSAAAMHGAKWVDARPAAELLYDHRRPPAGIHTWSDRVADDEIQPISGMNTTTPARTAL  120

Query  121  DLARRYPVGKAVAAIDALARATDLKLADVEMLAERYRGSRGIRNARIALDLVDPGAESPR  180
            DLARRYPVGKAVAAIDALARATDLKLADVEMLAERYRGSRGIRNARIALDLVDPGAESPR
Sbjct  121  DLARRYPVGKAVAAIDALARATDLKLADVEMLAERYRGSRGIRNARIALDLVDPGAESPR  180

Query  181  ETWLRLLLIRAGFPRPQTQIPVYDEYGQLVAVIDMGWAGIKVGVDYEGDHHRTDRRTFNK  240
            ETWLRLLLIRAGFPRPQTQIPVYDEYGQLVAVIDMGWAGIKVGVDYEGDHHRTDRRTFNK
Sbjct  181  ETWLRLLLIRAGFPRPQTQIPVYDEYGQLVAVIDMGWAGIKVGVDYEGDHHRTDRRTFNK  240

Query  241  DIKRAEALTELGWTDVRVTVEDTEGGIIWRVSAAWQRRT  279
            DIKRAEALTELGWTDVRVTVEDTEGGIIWRVSAAWQRRT
Sbjct  241  DIKRAEALTELGWTDVRVTVEDTEGGIIWRVSAAWQRRT  279


>gi|289763695|ref|ZP_06523073.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 
1503]
 gi|289711201|gb|EFD75217.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 
1503]
Length=280

 Score =  529 bits (1362),  Expect = 2e-148, Method: Compositional matrix adjust.
 Identities = 269/280 (97%), Positives = 272/280 (98%), Gaps = 1/280 (0%)

Query  1    VIEPFLGSEAIASGALTRHRLRSAYATIHPDVYVSPGADLTAWSRA-QAAWLWSRRRGVI  59
            +IEPFLGSEAIASGALTRHRLRSAYATIHPDVYVSPGADLTAW  A Q AWLWSR  GVI
Sbjct  1    MIEPFLGSEAIASGALTRHRLRSAYATIHPDVYVSPGADLTAWKSAPQPAWLWSRGGGVI  60

Query  60   AGQSAAAMHGAKWVDARQAAELLYDHRRPPAGIHTWSDRVADDEIQPISGMNTTTPARTA  119
            AG+SAAAMHGAKWVDAR+ AELLYDHRR PAGIHTWSDRVADDEIQPISGMNTTTPARTA
Sbjct  61   AGKSAAAMHGAKWVDARKGAELLYDHRRRPAGIHTWSDRVADDEIQPISGMNTTTPARTA  120

Query  120  LDLARRYPVGKAVAAIDALARATDLKLADVEMLAERYRGSRGIRNARIALDLVDPGAESP  179
            LDLARRYPVGKAVAAIDALARATDLKLADVEMLAERYRGSRGIRNARIALDLVDPGAESP
Sbjct  121  LDLARRYPVGKAVAAIDALARATDLKLADVEMLAERYRGSRGIRNARIALDLVDPGAESP  180

Query  180  RETWLRLLLIRAGFPRPQTQIPVYDEYGQLVAVIDMGWAGIKVGVDYEGDHHRTDRRTFN  239
            RETWLRLLLIRAGFPRPQTQIPVYDEYGQLVAVIDMGWAGIKVGVDYEGDHHRTDRRTFN
Sbjct  181  RETWLRLLLIRAGFPRPQTQIPVYDEYGQLVAVIDMGWAGIKVGVDYEGDHHRTDRRTFN  240

Query  240  KDIKRAEALTELGWTDVRVTVEDTEGGIIWRVSAAWQRRT  279
            KDIKRAEALTELGWTDVRVTVEDTEGGIIWRVSAAWQRRT
Sbjct  241  KDIKRAEALTELGWTDVRVTVEDTEGGIIWRVSAAWQRRT  280


>gi|289572169|ref|ZP_06452396.1| conserved hypothetical protein [Mycobacterium tuberculosis K85]
 gi|289536600|gb|EFD41178.1| conserved hypothetical protein [Mycobacterium tuberculosis K85]
Length=281

 Score =  499 bits (1284),  Expect = 2e-139, Method: Compositional matrix adjust.
 Identities = 250/250 (100%), Positives = 250/250 (100%), Gaps = 0/250 (0%)

Query  30   PDVYVSPGADLTAWSRAQAAWLWSRRRGVIAGQSAAAMHGAKWVDARQAAELLYDHRRPP  89
            PDVYVSPGADLTAWSRAQAAWLWSRRRGVIAGQSAAAMHGAKWVDARQAAELLYDHRRPP
Sbjct  32   PDVYVSPGADLTAWSRAQAAWLWSRRRGVIAGQSAAAMHGAKWVDARQAAELLYDHRRPP  91

Query  90   AGIHTWSDRVADDEIQPISGMNTTTPARTALDLARRYPVGKAVAAIDALARATDLKLADV  149
            AGIHTWSDRVADDEIQPISGMNTTTPARTALDLARRYPVGKAVAAIDALARATDLKLADV
Sbjct  92   AGIHTWSDRVADDEIQPISGMNTTTPARTALDLARRYPVGKAVAAIDALARATDLKLADV  151

Query  150  EMLAERYRGSRGIRNARIALDLVDPGAESPRETWLRLLLIRAGFPRPQTQIPVYDEYGQL  209
            EMLAERYRGSRGIRNARIALDLVDPGAESPRETWLRLLLIRAGFPRPQTQIPVYDEYGQL
Sbjct  152  EMLAERYRGSRGIRNARIALDLVDPGAESPRETWLRLLLIRAGFPRPQTQIPVYDEYGQL  211

Query  210  VAVIDMGWAGIKVGVDYEGDHHRTDRRTFNKDIKRAEALTELGWTDVRVTVEDTEGGIIW  269
            VAVIDMGWAGIKVGVDYEGDHHRTDRRTFNKDIKRAEALTELGWTDVRVTVEDTEGGIIW
Sbjct  212  VAVIDMGWAGIKVGVDYEGDHHRTDRRTFNKDIKRAEALTELGWTDVRVTVEDTEGGIIW  271

Query  270  RVSAAWQRRT  279
            RVSAAWQRRT
Sbjct  272  RVSAAWQRRT  281


>gi|15843127|ref|NP_338164.1| hypothetical protein MT3618 [Mycobacterium tuberculosis CDC1551]
 gi|13883476|gb|AAK47978.1| conserved hypothetical protein [Mycobacterium tuberculosis CDC1551]
Length=213

 Score =  427 bits (1097),  Expect = 1e-117, Method: Compositional matrix adjust.
 Identities = 213/213 (100%), Positives = 213/213 (100%), Gaps = 0/213 (0%)

Query  67   MHGAKWVDARQAAELLYDHRRPPAGIHTWSDRVADDEIQPISGMNTTTPARTALDLARRY  126
            MHGAKWVDARQAAELLYDHRRPPAGIHTWSDRVADDEIQPISGMNTTTPARTALDLARRY
Sbjct  1    MHGAKWVDARQAAELLYDHRRPPAGIHTWSDRVADDEIQPISGMNTTTPARTALDLARRY  60

Query  127  PVGKAVAAIDALARATDLKLADVEMLAERYRGSRGIRNARIALDLVDPGAESPRETWLRL  186
            PVGKAVAAIDALARATDLKLADVEMLAERYRGSRGIRNARIALDLVDPGAESPRETWLRL
Sbjct  61   PVGKAVAAIDALARATDLKLADVEMLAERYRGSRGIRNARIALDLVDPGAESPRETWLRL  120

Query  187  LLIRAGFPRPQTQIPVYDEYGQLVAVIDMGWAGIKVGVDYEGDHHRTDRRTFNKDIKRAE  246
            LLIRAGFPRPQTQIPVYDEYGQLVAVIDMGWAGIKVGVDYEGDHHRTDRRTFNKDIKRAE
Sbjct  121  LLIRAGFPRPQTQIPVYDEYGQLVAVIDMGWAGIKVGVDYEGDHHRTDRRTFNKDIKRAE  180

Query  247  ALTELGWTDVRVTVEDTEGGIIWRVSAAWQRRT  279
            ALTELGWTDVRVTVEDTEGGIIWRVSAAWQRRT
Sbjct  181  ALTELGWTDVRVTVEDTEGGIIWRVSAAWQRRT  213


>gi|254822601|ref|ZP_05227602.1| hypothetical protein MintA_21909 [Mycobacterium intracellulare 
ATCC 13950]
Length=278

 Score =  381 bits (978),  Expect = 7e-104, Method: Compositional matrix adjust.
 Identities = 192/266 (73%), Positives = 227/266 (86%), Gaps = 1/266 (0%)

Query  3    EPFLGSEAIASGALTRHRLRSAYATIHPDVYVSPGADLTAWSRAQAAWLWSRRRGVIAGQ  62
            EPF+GSEA+A+G LTR+RLRS +  +HPDVYV P  +LTA  RA AAWLWSRRRG++AG+
Sbjct  3    EPFIGSEALAAGTLTRYRLRSRFVALHPDVYVDPATELTATRRACAAWLWSRRRGIVAGR  62

Query  63   SAAAMHGAKWVDARQAAELLYDHRRPPAGIHTWSDRVADDEIQPISGMNTTTPARTALDL  122
            SA+A+HGAKWVD R  A+L+Y HRRPPAGI+TWSD +++DEIQ I+G+  TTPARTALDL
Sbjct  63   SASALHGAKWVDHRAPAQLVYQHRRPPAGINTWSDSLSEDEIQTIAGLRVTTPARTALDL  122

Query  123  ARRYPVGKAVAAIDALARATDLKLADVEMLAERYRGSRGIRNARIALDLVDPGAESPRET  182
            A RYPV +AVAAIDALARATDLK+++V+ L ERYRG RGI  AR+AL LVD GAESPRET
Sbjct  123  ACRYPVDRAVAAIDALARATDLKVSEVDSLGERYRGRRGIARARVALPLVDKGAESPRET  182

Query  183  WLRLLLIRAGFPRPQTQIPVYDEYGQLVAVIDMGWAGIKVGVDYEGDHHRTDRRTFNKDI  242
            WLRLLLIRAGFPRPQTQIPVYD YG L+A +DMGW  IK+ V+YEGDHHR D+R FNKDI
Sbjct  183  WLRLLLIRAGFPRPQTQIPVYD-YGALIACLDMGWQDIKLAVEYEGDHHRADQRQFNKDI  241

Query  243  KRAEALTELGWTDVRVTVEDTEGGII  268
            +RAE L E+GWT VRVT+EDT GG+I
Sbjct  242  RRAETLAEIGWTVVRVTIEDTPGGVI  267


>gi|240172349|ref|ZP_04751008.1| hypothetical protein MkanA1_23743 [Mycobacterium kansasii ATCC 
12478]
Length=279

 Score =  376 bits (965),  Expect = 3e-102, Method: Compositional matrix adjust.
 Identities = 193/265 (73%), Positives = 220/265 (84%), Gaps = 0/265 (0%)

Query  4    PFLGSEAIASGALTRHRLRSAYATIHPDVYVSPGADLTAWSRAQAAWLWSRRRGVIAGQS  63
            PF+GSEAIA+GALT +RLRS Y  +HPDVYV PG DLTA +RA AAWLWSRRRGV+ G S
Sbjct  4    PFIGSEAIATGALTPYRLRSRYVAVHPDVYVPPGTDLTATTRAHAAWLWSRRRGVVGGHS  63

Query  64   AAAMHGAKWVDARQAAELLYDHRRPPAGIHTWSDRVADDEIQPISGMNTTTPARTALDLA  123
            A+A+ GAKWVD R  A+LLYDHRRPP GI TWS RVADDEIQ + GM  TTPARTA DLA
Sbjct  64   ASALLGAKWVDHRAPAQLLYDHRRPPRGILTWSSRVADDEIQLVRGMPATTPARTAFDLA  123

Query  124  RRYPVGKAVAAIDALARATDLKLADVEMLAERYRGSRGIRNARIALDLVDPGAESPRETW  183
             R+PVGKAVAAIDALARAT+L++ D E+LAERY+G R IR AR AL LVD GAESPRETW
Sbjct  124  CRHPVGKAVAAIDALARATNLQVGDAELLAERYKGRRSIRRARSALKLVDAGAESPRETW  183

Query  184  LRLLLIRAGFPRPQTQIPVYDEYGQLVAVIDMGWAGIKVGVDYEGDHHRTDRRTFNKDIK  243
            LRLLLI AG+P PQTQ+ VY +YG++VA++DMGW  IKV V+YEGDHHRTDRR FNKDI 
Sbjct  184  LRLLLIDAGYPAPQTQMAVYGDYGEIVALLDMGWEHIKVAVEYEGDHHRTDRRQFNKDIA  243

Query  244  RAEALTELGWTDVRVTVEDTEGGII  268
            R EAL++LGW  VRVTVED  GGI+
Sbjct  244  RFEALSDLGWMVVRVTVEDVPGGIL  268


>gi|254773599|ref|ZP_05215115.1| hypothetical protein MaviaA2_02830 [Mycobacterium avium subsp. 
avium ATCC 25291]
Length=290

 Score =  372 bits (955),  Expect = 3e-101, Method: Compositional matrix adjust.
 Identities = 187/276 (68%), Positives = 221/276 (81%), Gaps = 1/276 (0%)

Query  3    EPFLGSEAIASGALTRHRLRSAYATIHPDVYVSPGADLTAWSRAQAAWLWSRRRGVIAGQ  62
            EPF+GSEA+ASG +T + LRS +  +HPDVYV  G  L+A  RA++AWLWSRRRGV+AG+
Sbjct  3    EPFIGSEAVASGLVTPYALRSRFVRVHPDVYVPAGTALSAGLRARSAWLWSRRRGVVAGR  62

Query  63   SAAAMHGAKWVDARQAAELLYDHRRPPAGIHTWSDRVADDEIQPISGMNTTTPARTALDL  122
            SAAA++G KW+D R  A+LLY +RRPP GI TWSDR+  DEIQ I GM  TTPARTALD+
Sbjct  63   SAAALYGTKWIDDRAPAQLLYPYRRPPDGIQTWSDRLVGDEIQTIGGMPVTTPARTALDI  122

Query  123  ARRYPVGKAVAAIDALARATDLKLADVEMLAERYRGSRGIRNARIALDLVDPGAESPRET  182
            A R PV KAVAAIDALARAT+LK+ ++E+LA+RYRG RGI  AR  L LVD GAESPRET
Sbjct  123  ACRSPVDKAVAAIDALARATELKVLEIELLADRYRGRRGITRARSVLPLVDAGAESPRET  182

Query  183  WLRLLLIRAGFPRPQTQIPVYDEYGQLVAVIDMGWAGIKVGVDYEGDHHRTDRRTFNKDI  242
            WLRLLL+RAGFPRP+TQ+PV  +YG L+A +DMGW  IK+ V+Y+GD HRTDRR F KDI
Sbjct  183  WLRLLLLRAGFPRPRTQLPVR-QYGALIACLDMGWEDIKLAVEYDGDQHRTDRRQFTKDI  241

Query  243  KRAEALTELGWTDVRVTVEDTEGGIIWRVSAAWQRR  278
            +RAE L ELGWT VRVT EDT  GII RVS AW RR
Sbjct  242  RRAEVLAELGWTVVRVTAEDTPAGIIARVSTAWTRR  277


>gi|118463860|ref|YP_879922.1| hypothetical protein MAV_0642 [Mycobacterium avium 104]
 gi|118165147|gb|ABK66044.1| conserved hypothetical protein [Mycobacterium avium 104]
Length=290

 Score =  370 bits (950),  Expect = 1e-100, Method: Compositional matrix adjust.
 Identities = 186/276 (68%), Positives = 220/276 (80%), Gaps = 1/276 (0%)

Query  3    EPFLGSEAIASGALTRHRLRSAYATIHPDVYVSPGADLTAWSRAQAAWLWSRRRGVIAGQ  62
            EPF+GSEA+ASG +T + LRS +  +HPDVYV  G  L+A  RA++AWLWSRRRGV+AG+
Sbjct  3    EPFIGSEAVASGLVTPYALRSRFVRVHPDVYVPAGTALSAGLRARSAWLWSRRRGVVAGR  62

Query  63   SAAAMHGAKWVDARQAAELLYDHRRPPAGIHTWSDRVADDEIQPISGMNTTTPARTALDL  122
            SAAA++G KW+D R  A+LLY +RRPP GI TWSDR+  DEIQ I GM  TTPARTALD+
Sbjct  63   SAAALYGTKWIDDRAPAQLLYPYRRPPDGIQTWSDRLVGDEIQTIGGMPVTTPARTALDI  122

Query  123  ARRYPVGKAVAAIDALARATDLKLADVEMLAERYRGSRGIRNARIALDLVDPGAESPRET  182
            A R PV KAVAAIDALARAT+LK+ ++E+LA+RYRG RGI  AR  L LVD GAESPRET
Sbjct  123  ACRSPVDKAVAAIDALARATELKVLEIELLADRYRGRRGITRARNVLPLVDAGAESPRET  182

Query  183  WLRLLLIRAGFPRPQTQIPVYDEYGQLVAVIDMGWAGIKVGVDYEGDHHRTDRRTFNKDI  242
            WLRLLL+RAGFPRP+TQ+PV  +YG L+A +DMGW  IK+ V+Y+GD HRTDRR F KDI
Sbjct  183  WLRLLLLRAGFPRPRTQLPVR-QYGALIACLDMGWEDIKLAVEYDGDQHRTDRRQFTKDI  241

Query  243  KRAEALTELGWTDVRVTVEDTEGGIIWRVSAAWQRR  278
            +RAE L ELGWT VRVT EDT  GII RV  AW RR
Sbjct  242  RRAEVLAELGWTVVRVTAEDTPAGIIARVPTAWTRR  277


>gi|108801592|ref|YP_641789.1| hypothetical protein Mmcs_4629 [Mycobacterium sp. MCS]
 gi|119870746|ref|YP_940698.1| hypothetical protein Mkms_4717 [Mycobacterium sp. KMS]
 gi|108772011|gb|ABG10733.1| conserved hypothetical protein [Mycobacterium sp. MCS]
 gi|119696835|gb|ABL93908.1| conserved hypothetical protein [Mycobacterium sp. KMS]
Length=277

 Score =  367 bits (942),  Expect = 1e-99, Method: Compositional matrix adjust.
 Identities = 190/277 (69%), Positives = 219/277 (80%), Gaps = 2/277 (0%)

Query  3    EPFLGSEAIASGALTRHRLRSAYATIHPDVYVSPGADLTAWSRAQAAWLWSRRRGVIAGQ  62
            EPF+GSEA+ SGALT + LRS +  +HPDVYV   A++TA  RA+AAWLWSRR GV+AGQ
Sbjct  3    EPFIGSEAVTSGALTPYALRSRFRAVHPDVYVPTHAEMTATQRAKAAWLWSRRHGVVAGQ  62

Query  63   SAAAMHGAKWVDARQAAELLYDHRRPPAGIHTWSDRVADDEIQPISGMNTTTPARTALDL  122
            SAAA+HGAKWVDA   AE+L+ +RRPP G+ TWSDR ADDE+Q + G+  TTPARTALD 
Sbjct  63   SAAALHGAKWVDA-STAEVLWSNRRPPPGVRTWSDRFADDEVQILGGIRVTTPARTALDP  121

Query  123  ARRYPVGKAVAAIDALARATDLKLADVEMLAERYRGSRGIRNARIALDLVDPGAESPRET  182
            A RYP+ +AVAAIDALARAT LK+ADV  LAERY G RGIRNA   L LVDPGAESPRET
Sbjct  122  AARYPLDRAVAAIDALARATHLKVADVTQLAERYPGRRGIRNAHNVLPLVDPGAESPRET  181

Query  183  WLRLLLIRAGFPRPQTQIPVYDEYGQLVAVIDMGWAGIKVGVDYEGDHHRTDRRTFNKDI  242
            WLRLL IR GFP P TQIPVYD YG LVAV+DMGW  IKV +DYEG HHR   R F+KDI
Sbjct  182  WLRLLAIRNGFPPPTTQIPVYDGYGVLVAVLDMGWEDIKVALDYEGAHHRGPDR-FHKDI  240

Query  243  KRAEALTELGWTDVRVTVEDTEGGIIWRVSAAWQRRT  279
             R + +TELGW D+RV+  DTEGGI+ R+ AAW RRT
Sbjct  241  HRHDDVTELGWIDIRVSSRDTEGGIVRRLQAAWARRT  277


>gi|126437575|ref|YP_001073266.1| hypothetical protein Mjls_5011 [Mycobacterium sp. JLS]
 gi|126237375|gb|ABO00776.1| conserved hypothetical protein [Mycobacterium sp. JLS]
Length=277

 Score =  367 bits (942),  Expect = 1e-99, Method: Compositional matrix adjust.
 Identities = 189/277 (69%), Positives = 220/277 (80%), Gaps = 2/277 (0%)

Query  3    EPFLGSEAIASGALTRHRLRSAYATIHPDVYVSPGADLTAWSRAQAAWLWSRRRGVIAGQ  62
            EPF+GSEA+ SGALT + LRS +  +HPDVY    A++TA  RA+AAWLWSRR+GV+AGQ
Sbjct  3    EPFIGSEAVTSGALTPYALRSRFRAVHPDVYEPTHAEMTATQRAKAAWLWSRRQGVVAGQ  62

Query  63   SAAAMHGAKWVDARQAAELLYDHRRPPAGIHTWSDRVADDEIQPISGMNTTTPARTALDL  122
            SAAA+HGAKWVDA   AE+L+ +RRPP G+ TWSDR  DDE+Q + G+  TTPARTALDL
Sbjct  63   SAAALHGAKWVDA-STAEVLWSNRRPPPGVRTWSDRFVDDEVQILGGIRVTTPARTALDL  121

Query  123  ARRYPVGKAVAAIDALARATDLKLADVEMLAERYRGSRGIRNARIALDLVDPGAESPRET  182
            A RYP+ +AVAAIDALARAT LK+ADV  LAERY G RGIRNA   L LVDPGAESPRET
Sbjct  122  AARYPLDRAVAAIDALARATHLKVADVTPLAERYPGRRGIRNAHNVLTLVDPGAESPRET  181

Query  183  WLRLLLIRAGFPRPQTQIPVYDEYGQLVAVIDMGWAGIKVGVDYEGDHHRTDRRTFNKDI  242
            WLRLL+IR GFP P TQIPVYD YG LVAV+DMGW  IKV +DYEG HHR   R F+KDI
Sbjct  182  WLRLLVIRNGFPPPTTQIPVYDGYGVLVAVLDMGWEDIKVALDYEGAHHRGPDR-FHKDI  240

Query  243  KRAEALTELGWTDVRVTVEDTEGGIIWRVSAAWQRRT  279
             R + +TELGW D+RV+  DTEGGI+ R+ AAW RRT
Sbjct  241  HRHDDVTELGWIDIRVSSRDTEGGIVRRLQAAWARRT  277


>gi|41406646|ref|NP_959482.1| hypothetical protein MAP0548c [Mycobacterium avium subsp. paratuberculosis 
K-10]
 gi|41394995|gb|AAS02865.1| hypothetical protein MAP_0548c [Mycobacterium avium subsp. paratuberculosis 
K-10]
 gi|336458435|gb|EGO37409.1| hypothetical protein MAPs_13300 [Mycobacterium avium subsp. paratuberculosis 
S397]
Length=290

 Score =  353 bits (905),  Expect = 2e-95, Method: Compositional matrix adjust.
 Identities = 187/277 (68%), Positives = 221/277 (80%), Gaps = 1/277 (0%)

Query  3    EPFLGSEAIASGALTRHRLRSAYATIHPDVYVSPGADLTAWSRAQAAWLWSRRRGVIAGQ  62
            EPF+GSEA+ASG +T + LRS +  +HPDVYV  G  L+A  RA++AWLWSRRRGV+AG+
Sbjct  3    EPFIGSEAVASGLVTPYALRSRFVRVHPDVYVPAGTALSAGLRARSAWLWSRRRGVVAGR  62

Query  63   SAAAMHGAKWVDARQAAELLYDHRRPPAGIHTWSDRVADDEIQPISGMNTTTPARTALDL  122
            SAAA++G KW+D R  A+LLY +RRPP GI TWSDR+  DEIQ I GM  TTPARTALD+
Sbjct  63   SAAALYGTKWIDDRAPAQLLYPYRRPPDGIQTWSDRLVGDEIQTIGGMPVTTPARTALDI  122

Query  123  ARRYPVGKAVAAIDALARATDLKLADVEMLAERYRGSRGIRNARIALDLVDPGAESPRET  182
            A R PV KAVAAIDALARAT+LK+ ++E+LA+RYRG RGI   R  L LVD GAESPRET
Sbjct  123  ACRSPVDKAVAAIDALARATELKVLEIELLADRYRGRRGITRGRSVLPLVDAGAESPRET  182

Query  183  WLRLLLIRAGFPRPQTQIPVYDEYGQLVAVIDMGWAGIKVGVDYEGDHHRTDRRTFNKDI  242
            WLRLLL+RAGFPRP+TQ+PV  +YG L+A +DMGW  IK+ V+Y+GD HRTDRR F KDI
Sbjct  183  WLRLLLLRAGFPRPRTQLPVR-QYGALIACLDMGWEDIKLAVEYDGDQHRTDRRQFTKDI  241

Query  243  KRAEALTELGWTDVRVTVEDTEGGIIWRVSAAWQRRT  279
            +RAE L ELGWT VRVT EDT  GII RVS AW RRT
Sbjct  242  RRAEVLAELGWTVVRVTAEDTPAGIIARVSTAWTRRT  278


>gi|118470374|ref|YP_890143.1| hypothetical protein MSMEG_5917 [Mycobacterium smegmatis str. 
MC2 155]
 gi|118171661|gb|ABK72557.1| conserved hypothetical protein [Mycobacterium smegmatis str. 
MC2 155]
Length=282

 Score =  333 bits (855),  Expect = 1e-89, Method: Compositional matrix adjust.
 Identities = 165/272 (61%), Positives = 205/272 (76%), Gaps = 0/272 (0%)

Query  3    EPFLGSEAIASGALTRHRLRSAYATIHPDVYVSPGADLTAWSRAQAAWLWSRRRGVIAGQ  62
            +P +G+EA+A+G  T ++LRS Y  ++P +YV      TA  RA+AAWLWS RR V+AG+
Sbjct  3    DPVIGTEAVAAGFATPYQLRSRYWPVYPGIYVPKDTQPTAALRAKAAWLWSDRRAVLAGR  62

Query  63   SAAAMHGAKWVDARQAAELLYDHRRPPAGIHTWSDRVADDEIQPISGMNTTTPARTALDL  122
            SA+A+H ++W+D R  AEL++D+RRPP GI TW DR  DDEI  + G+  TTPARTA+DL
Sbjct  63   SASALHRSRWLDPRAPAELIHDNRRPPCGIKTWLDRFEDDEITVVDGIRVTTPARTAVDL  122

Query  123  ARRYPVGKAVAAIDALARATDLKLADVEMLAERYRGSRGIRNARIALDLVDPGAESPRET  182
            A RYP+  AV  IDAL  AT LK+ADVE+L +RYRG RGI+NAR  LDLVD GAESPRET
Sbjct  123  ACRYPLDTAVTLIDALGNATRLKMADVELLVDRYRGRRGIKNARHVLDLVDGGAESPRET  182

Query  183  WLRLLLIRAGFPRPQTQIPVYDEYGQLVAVIDMGWAGIKVGVDYEGDHHRTDRRTFNKDI  242
            WLRL +IR GFPRPQTQIPV+DEYG LV V DMGW    VG+DYEGD HRTDRR FN+DI
Sbjct  183  WLRLEVIRGGFPRPQTQIPVHDEYGVLVGVFDMGWEDAMVGLDYEGDQHRTDRRRFNRDI  242

Query  243  KRAEALTELGWTDVRVTVEDTEGGIIWRVSAA  274
             ++E +  LGWT +RVT +D E  I+ R+ AA
Sbjct  243  HKSEDVRRLGWTHIRVTAQDGEADILKRIEAA  274


>gi|108797077|ref|YP_637274.1| hypothetical protein Mmcs_0096 [Mycobacterium sp. MCS]
 gi|119866162|ref|YP_936114.1| hypothetical protein Mkms_0105 [Mycobacterium sp. KMS]
 gi|108767496|gb|ABG06218.1| conserved hypothetical protein [Mycobacterium sp. MCS]
 gi|119692251|gb|ABL89324.1| conserved hypothetical protein [Mycobacterium sp. KMS]
Length=286

 Score =  324 bits (831),  Expect = 7e-87, Method: Compositional matrix adjust.
 Identities = 158/272 (59%), Positives = 206/272 (76%), Gaps = 1/272 (0%)

Query  4    PFLGSEAIASGALTRHRLRSAYATIHPDVYVSPGADLTAWSRAQAAWLWSRRRGVIAGQS  63
            PFLGS A+A+G +TRH LR+ Y  +H DVYV+   ++TA  RA+A WL SR  GV+AG S
Sbjct  12   PFLGSGALAAG-MTRHALRTRYVAVHKDVYVAENTEMTAIVRARACWLRSRGHGVLAGFS  70

Query  64   AAAMHGAKWVDARQAAELLYDHRRPPAGIHTWSDRVADDEIQPISGMNTTTPARTALDLA  123
            A+A+HG++W+D R+ A ++ ++RR   G+  W+D + DDEI  I+GM  TTP RTA+DLA
Sbjct  71   ASALHGSRWIDGRRPATVIGNNRRREPGVTVWADAIGDDEICLINGMRVTTPLRTAIDLA  130

Query  124  RRYPVGKAVAAIDALARATDLKLADVEMLAERYRGSRGIRNARIALDLVDPGAESPRETW  183
            RRYPV K+V AIDALARAT L + D+    +RY G +GI+ AR A+ LVDPGAESP+ETW
Sbjct  131  RRYPVDKSVPAIDALARATRLSVTDLRQALDRYAGWKGIKQARTAIGLVDPGAESPKETW  190

Query  184  LRLLLIRAGFPRPQTQIPVYDEYGQLVAVIDMGWAGIKVGVDYEGDHHRTDRRTFNKDIK  243
            LRLL++RAGFPRP+TQ+PVYDEYG L+  +D+GW   K+  +YEGDHHRT+R  F KDI+
Sbjct  191  LRLLIVRAGFPRPETQLPVYDEYGMLIGEVDLGWRDHKIAAEYEGDHHRTNRVVFRKDIR  250

Query  244  RAEALTELGWTDVRVTVEDTEGGIIWRVSAAW  275
            R EALTE GW  +RVT  DTEGGII R+ +A+
Sbjct  251  RIEALTEQGWLVIRVTALDTEGGIIRRLESAF  282


>gi|315445583|ref|YP_004078462.1| hypothetical protein Mspyr1_40410 [Mycobacterium sp. Spyr1]
 gi|315263886|gb|ADU00628.1| hypothetical protein Mspyr1_40410 [Mycobacterium sp. Spyr1]
Length=301

 Score =  311 bits (798),  Expect = 5e-83, Method: Compositional matrix adjust.
 Identities = 173/276 (63%), Positives = 220/276 (80%), Gaps = 1/276 (0%)

Query  3    EPFLGSEAIASGALTRHRLRSAYATIHPDVYVSPGADLTAWSRAQAAWLWSRRRGVIAGQ  62
            EPF+GSEA+ +G LTRH+LR+A+  ++PDVYV     LTA ++A+AA LW+ R G+IAGQ
Sbjct  3    EPFIGSEALRAGRLTRHQLRTAHIAVYPDVYVPVATTLTAVAKAKAASLWTGREGIIAGQ  62

Query  63   SAAAMHGAKWVDARQAAELLYDHRRPPAGIHTWSDRVADDEIQPISGMNTTTPARTALDL  122
            SAAA+HGA+WVDAR+ AE+L+ +RR P G+  WSDRVADDE+  + G+  TTP RTALD+
Sbjct  63   SAAALHGARWVDARRPAEVLWHNRRAPRGVLVWSDRVADDEVTTVRGVRVTTPERTALDI  122

Query  123  ARRYPVGKAVAAIDALARATDLKLADVEMLAERYRGSRGIRNARIALDLVDPGAESPRET  182
            A RYP  +AVAAIDALARA  +KLADVE+L +R++G RGIR AR AL+LVDPGAESP+ET
Sbjct  123  ACRYPQRRAVAAIDALARAAHMKLADVELLVDRHKGRRGIRAARAALNLVDPGAESPQET  182

Query  183  WLRLLLIRAGFPRPQTQIPVYDEYGQLVAVIDMGWAGIKVGVDYEGDHHRTDRRTFNKDI  242
            +LRL +I   FP PQTQIPV+D  G LVA +DMGW  + +G+DYEGDHHRT R  FNK I
Sbjct  183  YLRLTVIGNHFPPPQTQIPVWD-CGALVAELDMGWEHMMIGLDYEGDHHRTTREAFNKGI  241

Query  243  KRAEALTELGWTDVRVTVEDTEGGIIWRVSAAWQRR  278
            +R +A+TELGWTD+RVT  DTEG II R++ AW++R
Sbjct  242  RRHDAVTELGWTDIRVTCNDTEGAIIARLTTAWRQR  277


>gi|145225286|ref|YP_001135964.1| hypothetical protein Mflv_4708 [Mycobacterium gilvum PYR-GCK]
 gi|145217772|gb|ABP47176.1| conserved hypothetical protein [Mycobacterium gilvum PYR-GCK]
Length=301

 Score =  310 bits (794),  Expect = 1e-82, Method: Compositional matrix adjust.
 Identities = 173/276 (63%), Positives = 219/276 (80%), Gaps = 1/276 (0%)

Query  3    EPFLGSEAIASGALTRHRLRSAYATIHPDVYVSPGADLTAWSRAQAAWLWSRRRGVIAGQ  62
            EPF+GSEA+ +G LTRH+LR+A+  ++PDVYV     LTA ++A+AA LW+ R G+IAGQ
Sbjct  3    EPFIGSEALRAGRLTRHQLRTAHIAVYPDVYVPVATTLTAVAKAKAASLWTGREGIIAGQ  62

Query  63   SAAAMHGAKWVDARQAAELLYDHRRPPAGIHTWSDRVADDEIQPISGMNTTTPARTALDL  122
            SAAA+HGA+WVDAR+ AE+L+ +RR P G+  WSDRVADDE+  + G+  TTP RTALD+
Sbjct  63   SAAAIHGARWVDARRPAEVLWHNRRAPRGVLVWSDRVADDEVTTVRGVRVTTPERTALDI  122

Query  123  ARRYPVGKAVAAIDALARATDLKLADVEMLAERYRGSRGIRNARIALDLVDPGAESPRET  182
            A RYP  +AVAAIDALARA  +KLADVE+L +R+ G RGIR AR AL+LVDPGAESP+ET
Sbjct  123  ACRYPQRRAVAAIDALARAAHMKLADVELLVDRHTGRRGIRAARAALNLVDPGAESPQET  182

Query  183  WLRLLLIRAGFPRPQTQIPVYDEYGQLVAVIDMGWAGIKVGVDYEGDHHRTDRRTFNKDI  242
            +LRL +I   FP PQTQIPV+D  G LVA +DMGW  + +G+DYEGDHHRT R  FNK I
Sbjct  183  YLRLTVIGNHFPPPQTQIPVWD-CGALVAELDMGWEHMMIGLDYEGDHHRTTREAFNKGI  241

Query  243  KRAEALTELGWTDVRVTVEDTEGGIIWRVSAAWQRR  278
            +R +A+TELGWTD+RVT  DTEG II R++ AW++R
Sbjct  242  RRHDAVTELGWTDIRVTCNDTEGAIIARLTTAWRQR  277


>gi|296166568|ref|ZP_06848998.1| conserved hypothetical protein [Mycobacterium parascrofulaceum 
ATCC BAA-614]
 gi|295898054|gb|EFG77630.1| conserved hypothetical protein [Mycobacterium parascrofulaceum 
ATCC BAA-614]
Length=281

 Score =  308 bits (790),  Expect = 4e-82, Method: Compositional matrix adjust.
 Identities = 152/277 (55%), Positives = 198/277 (72%), Gaps = 0/277 (0%)

Query  3    EPFLGSEAIASGALTRHRLRSAYATIHPDVYVSPGADLTAWSRAQAAWLWSRRRGVIAGQ  62
            +PF+GSEA+A+GALT+ +L +    + PDVY      + A SRA+A WLW+ RRGVIAG 
Sbjct  3    QPFIGSEAVAAGALTKTQLATRCRRVFPDVYTGRDVAMNAESRARAGWLWAHRRGVIAGF  62

Query  63   SAAAMHGAKWVDARQAAELLYDHRRPPAGIHTWSDRVADDEIQPISGMNTTTPARTALDL  122
            SAAA+HG+KWVD  Q  ELL+D+RR P GI T  DR+ DDEI  ++G+  T+PARTALDL
Sbjct  63   SAAALHGSKWVDDGQVVELLHDNRRSPPGIKTHRDRIEDDEISLVAGLPVTSPARTALDL  122

Query  123  ARRYPVGKAVAAIDALARATDLKLADVEMLAERYRGSRGIRNARIALDLVDPGAESPRET  182
            A  YP   AVA IDALAR T+LK  D+++LA RY   RGI  AR A+DL DPGA+SP+E+
Sbjct  123  ACWYPTTTAVAGIDALARVTELKAVDIDLLARRYAKRRGIMRARRAVDLFDPGAQSPKES  182

Query  183  WLRLLLIRAGFPRPQTQIPVYDEYGQLVAVIDMGWAGIKVGVDYEGDHHRTDRRTFNKDI  242
            WLR++L+ AG PRPQTQIPV+DE+G + A +DMGW  +KV V+Y+G+ HR DRR ++ D+
Sbjct  183  WLRIVLVEAGLPRPQTQIPVFDEFGSVFAYLDMGWDDVKVAVEYDGEQHRNDRRQYSWDV  242

Query  243  KRAEALTELGWTDVRVTVEDTEGGIIWRVSAAWQRRT  279
            +R E L  LGW  +RV   D    I+ RV  A+ RR 
Sbjct  243  RRLETLERLGWIVIRVVAGDRPAEIVRRVRVAFDRRV  279


>gi|15840943|ref|NP_335980.1| hypothetical protein MT1529 [Mycobacterium tuberculosis CDC1551]
 gi|13881149|gb|AAK45794.1| conserved hypothetical protein [Mycobacterium tuberculosis CDC1551]
 gi|339294457|gb|AEJ46568.1| hypothetical protein CCDC5079_1378 [Mycobacterium tuberculosis 
CCDC5079]
 gi|339298097|gb|AEJ50207.1| hypothetical protein CCDC5180_1370 [Mycobacterium tuberculosis 
CCDC5180]
Length=292

 Score =  302 bits (774),  Expect = 4e-80, Method: Compositional matrix adjust.
 Identities = 161/275 (59%), Positives = 194/275 (71%), Gaps = 1/275 (0%)

Query  1    VIEPFLGSEAIASGALTRHRLRSAYATIHPDVYVSPGADLTAWSRAQAAWLWSRRRGVIA  60
            + +PFLGSEA+A+G LT + LRS Y  +H DVYV  G +LTA  RA+A WL SRRRGV+A
Sbjct  13   MTDPFLGSEALAAGVLTPYELRSRYVALHKDVYVPQGVELTAQLRAKALWLRSRRRGVLA  72

Query  61   GQSAAAMHGAKWVDARQAAELLYDHRRPPAGIHTWSDRVADDEIQPISGMNTTTPARTAL  120
            G SA+A HGAKW+DA   A ++  +RR   G+  W +R+  DEI  I GM  TTP RTAL
Sbjct  73   GYSASAFHGAKWIDADLPAAIIDTNRRRAPGLQVWEERIEPDEICVIEGMRVTTPERTAL  132

Query  121  DLARRYPVGKAVAAIDALARATDLKLADVEMLAERYRGSRGIRNARIALDLVDPGAESPR  180
            DL  R+P+  AVAA+DAL +ATDLK+ADVE L ERYRG RG++ AR ALDLVD GA+SP+
Sbjct  133  DLTSRFPLDPAVAAVDALIQATDLKVADVEPLIERYRGRRGMKAARAALDLVDGGAQSPK  192

Query  181  ETWLRLLLIRAGFPRPQTQIPVYDEYGQLVAVIDMGWAGIKVGVDYEGDHHRTDRRTFNK  240
            ETWLRLLLIRAGFPRPQTQI V +E+G   A +DMGW  IKV  +Y+GDHH T R  + K
Sbjct  193  ETWLRLLLIRAGFPRPQTQIAVRNEWGWAEAHLDMGWQDIKVAAEYDGDHHLTSRYHYRK  252

Query  241  DIKRAEALTE-LGWTDVRVTVEDTEGGIIWRVSAA  274
            DI R E +    GW  VRV  ED    II RV  A
Sbjct  253  DILRHEKVQHRYGWIVVRVVAEDHPADIIRRVGEA  287


>gi|31792677|ref|NP_855170.1| hypothetical protein Mb1518c [Mycobacterium bovis AF2122/97]
 gi|57116873|ref|NP_215998.2| hypothetical protein Rv1482c [Mycobacterium tuberculosis H37Rv]
 gi|121637413|ref|YP_977636.1| hypothetical protein BCG_1544c [Mycobacterium bovis BCG str. 
Pasteur 1173P2]
 67 more sequence titles
 gi|148661275|ref|YP_001282798.1| hypothetical protein MRA_1492 [Mycobacterium tuberculosis H37Ra]
 gi|148822702|ref|YP_001287456.1| hypothetical protein TBFG_11511 [Mycobacterium tuberculosis F11]
 gi|167968027|ref|ZP_02550304.1| hypothetical protein MtubH3_08298 [Mycobacterium tuberculosis 
H37Ra]
 gi|224989888|ref|YP_002644575.1| hypothetical protein JTY_1519 [Mycobacterium bovis BCG str. Tokyo 
172]
 gi|253799468|ref|YP_003032469.1| hypothetical protein TBMG_02499 [Mycobacterium tuberculosis KZN 
1435]
 gi|254364353|ref|ZP_04980399.1| conserved hypothetical protein [Mycobacterium tuberculosis str. 
Haarlem]
 gi|254550499|ref|ZP_05140946.1| hypothetical protein Mtube_08562 [Mycobacterium tuberculosis 
'98-R604 INH-RIF-EM']
 gi|289442930|ref|ZP_06432674.1| conserved hypothetical protein [Mycobacterium tuberculosis T46]
 gi|289554728|ref|ZP_06443938.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 
605]
 gi|289569507|ref|ZP_06449734.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
 gi|289574163|ref|ZP_06454390.1| conserved hypothetical protein [Mycobacterium tuberculosis K85]
 gi|289745233|ref|ZP_06504611.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
 gi|289753565|ref|ZP_06512943.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
 gi|289757594|ref|ZP_06516972.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
 gi|289761640|ref|ZP_06521018.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 
1503]
 gi|294993226|ref|ZP_06798917.1| hypothetical protein Mtub2_01642 [Mycobacterium tuberculosis 
210]
 gi|297634048|ref|ZP_06951828.1| hypothetical protein MtubK4_07992 [Mycobacterium tuberculosis 
KZN 4207]
 gi|297731034|ref|ZP_06960152.1| hypothetical protein MtubKR_08077 [Mycobacterium tuberculosis 
KZN R506]
 gi|298524991|ref|ZP_07012400.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A]
 gi|306775671|ref|ZP_07414008.1| hypothetical protein TMAG_02811 [Mycobacterium tuberculosis SUMu001]
 gi|306779491|ref|ZP_07417828.1| hypothetical protein TMBG_00035 [Mycobacterium tuberculosis SUMu002]
 gi|306784221|ref|ZP_07422543.1| hypothetical protein TMCG_03595 [Mycobacterium tuberculosis SUMu003]
 gi|306788588|ref|ZP_07426910.1| hypothetical protein TMDG_03692 [Mycobacterium tuberculosis SUMu004]
 gi|306792931|ref|ZP_07431233.1| hypothetical protein TMEG_01386 [Mycobacterium tuberculosis SUMu005]
 gi|306797309|ref|ZP_07435611.1| hypothetical protein TMFG_00576 [Mycobacterium tuberculosis SUMu006]
 gi|306803190|ref|ZP_07439858.1| hypothetical protein TMHG_00672 [Mycobacterium tuberculosis SUMu008]
 gi|306807769|ref|ZP_07444437.1| hypothetical protein TMGG_00035 [Mycobacterium tuberculosis SUMu007]
 gi|306967589|ref|ZP_07480250.1| hypothetical protein TMIG_01743 [Mycobacterium tuberculosis SUMu009]
 gi|306971780|ref|ZP_07484441.1| hypothetical protein TMJG_02917 [Mycobacterium tuberculosis SUMu010]
 gi|307079499|ref|ZP_07488669.1| hypothetical protein TMKG_01990 [Mycobacterium tuberculosis SUMu011]
 gi|307084058|ref|ZP_07493171.1| hypothetical protein TMLG_00465 [Mycobacterium tuberculosis SUMu012]
 gi|313658367|ref|ZP_07815247.1| hypothetical protein MtubKV_08097 [Mycobacterium tuberculosis 
KZN V2475]
 gi|339631550|ref|YP_004723192.1| hypothetical protein MAF_15050 [Mycobacterium africanum GM041182]
 gi|31618267|emb|CAD96185.1| CONSERVED HYPOTHETICAL PROTEIN [Mycobacterium bovis AF2122/97]
 gi|38490279|emb|CAB02032.2| CONSERVED HYPOTHETICAL PROTEIN [Mycobacterium tuberculosis H37Rv]
 gi|121493060|emb|CAL71531.1| Conserved hypothetical protein [Mycobacterium bovis BCG str. 
Pasteur 1173P2]
 gi|134149867|gb|EBA41912.1| conserved hypothetical protein [Mycobacterium tuberculosis str. 
Haarlem]
 gi|148505427|gb|ABQ73236.1| hypothetical protein MRA_1492 [Mycobacterium tuberculosis H37Ra]
 gi|148721229|gb|ABR05854.1| conserved hypothetical protein [Mycobacterium tuberculosis F11]
 gi|224773001|dbj|BAH25807.1| hypothetical protein JTY_1519 [Mycobacterium bovis BCG str. Tokyo 
172]
 gi|253320971|gb|ACT25574.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 
1435]
 gi|289415849|gb|EFD13089.1| conserved hypothetical protein [Mycobacterium tuberculosis T46]
 gi|289439360|gb|EFD21853.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 
605]
 gi|289538594|gb|EFD43172.1| conserved hypothetical protein [Mycobacterium tuberculosis K85]
 gi|289543261|gb|EFD46909.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
 gi|289685761|gb|EFD53249.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
 gi|289694152|gb|EFD61581.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
 gi|289709146|gb|EFD73162.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 
1503]
 gi|289713158|gb|EFD77170.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
 gi|298494785|gb|EFI30079.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A]
 gi|308215768|gb|EFO75167.1| hypothetical protein TMAG_02811 [Mycobacterium tuberculosis SUMu001]
 gi|308327532|gb|EFP16383.1| hypothetical protein TMBG_00035 [Mycobacterium tuberculosis SUMu002]
 gi|308330995|gb|EFP19846.1| hypothetical protein TMCG_03595 [Mycobacterium tuberculosis SUMu003]
 gi|308334817|gb|EFP23668.1| hypothetical protein TMDG_03692 [Mycobacterium tuberculosis SUMu004]
 gi|308338605|gb|EFP27456.1| hypothetical protein TMEG_01386 [Mycobacterium tuberculosis SUMu005]
 gi|308342307|gb|EFP31158.1| hypothetical protein TMFG_00576 [Mycobacterium tuberculosis SUMu006]
 gi|308345801|gb|EFP34652.1| hypothetical protein TMGG_00035 [Mycobacterium tuberculosis SUMu007]
 gi|308350101|gb|EFP38952.1| hypothetical protein TMHG_00672 [Mycobacterium tuberculosis SUMu008]
 gi|308354738|gb|EFP43589.1| hypothetical protein TMIG_01743 [Mycobacterium tuberculosis SUMu009]
 gi|308358645|gb|EFP47496.1| hypothetical protein TMJG_02917 [Mycobacterium tuberculosis SUMu010]
 gi|308362623|gb|EFP51474.1| hypothetical protein TMKG_01990 [Mycobacterium tuberculosis SUMu011]
 gi|308366305|gb|EFP55156.1| hypothetical protein TMLG_00465 [Mycobacterium tuberculosis SUMu012]
 gi|323719930|gb|EGB29042.1| hypothetical protein TMMG_00742 [Mycobacterium tuberculosis CDC1551A]
 gi|328459216|gb|AEB04639.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 
4207]
 gi|339330906|emb|CCC26577.1| conserved hypothetical protein [Mycobacterium africanum GM041182]
 gi|341601432|emb|CCC64105.1| conserved hypothetical protein [Mycobacterium bovis BCG str. 
Moreau RDJ]
 gi|344219313|gb|AEM99943.1| hypothetical protein MTCTRI2_1520 [Mycobacterium tuberculosis 
CTRI-2]
Length=280

 Score =  302 bits (773),  Expect = 5e-80, Method: Compositional matrix adjust.
 Identities = 161/275 (59%), Positives = 194/275 (71%), Gaps = 1/275 (0%)

Query  1    VIEPFLGSEAIASGALTRHRLRSAYATIHPDVYVSPGADLTAWSRAQAAWLWSRRRGVIA  60
            + +PFLGSEA+A+G LT + LRS Y  +H DVYV  G +LTA  RA+A WL SRRRGV+A
Sbjct  1    MTDPFLGSEALAAGVLTPYELRSRYVALHKDVYVPQGVELTAQLRAKALWLRSRRRGVLA  60

Query  61   GQSAAAMHGAKWVDARQAAELLYDHRRPPAGIHTWSDRVADDEIQPISGMNTTTPARTAL  120
            G SA+A HGAKW+DA   A ++  +RR   G+  W +R+  DEI  I GM  TTP RTAL
Sbjct  61   GYSASAFHGAKWIDADLPAAIIDTNRRRAPGLQVWEERIEPDEICVIEGMRVTTPERTAL  120

Query  121  DLARRYPVGKAVAAIDALARATDLKLADVEMLAERYRGSRGIRNARIALDLVDPGAESPR  180
            DL  R+P+  AVAA+DAL +ATDLK+ADVE L ERYRG RG++ AR ALDLVD GA+SP+
Sbjct  121  DLTSRFPLDPAVAAVDALIQATDLKVADVEPLIERYRGRRGMKAARAALDLVDGGAQSPK  180

Query  181  ETWLRLLLIRAGFPRPQTQIPVYDEYGQLVAVIDMGWAGIKVGVDYEGDHHRTDRRTFNK  240
            ETWLRLLLIRAGFPRPQTQI V +E+G   A +DMGW  IKV  +Y+GDHH T R  + K
Sbjct  181  ETWLRLLLIRAGFPRPQTQIAVRNEWGWAEAHLDMGWQDIKVAAEYDGDHHLTSRYHYRK  240

Query  241  DIKRAEALTE-LGWTDVRVTVEDTEGGIIWRVSAA  274
            DI R E +    GW  VRV  ED    II RV  A
Sbjct  241  DILRHEKVQHRYGWIVVRVVAEDHPADIIRRVGEA  275


>gi|254775741|ref|ZP_05217257.1| hypothetical protein MaviaA2_13885 [Mycobacterium avium subsp. 
avium ATCC 25291]
Length=279

 Score =  301 bits (772),  Expect = 5e-80, Method: Compositional matrix adjust.
 Identities = 156/268 (59%), Positives = 195/268 (73%), Gaps = 0/268 (0%)

Query  1    VIEPFLGSEAIASGALTRHRLRSAYATIHPDVYVSPGADLTAWSRAQAAWLWSRRRGVIA  60
            + +PFLGSEA+A+  L+RH LRS Y  +H DVYV+  A+LTA  RA+AAWL SRRRGV+A
Sbjct  1    MTDPFLGSEALAARLLSRHELRSRYVALHRDVYVARDAELTAVVRAKAAWLRSRRRGVLA  60

Query  61   GQSAAAMHGAKWVDARQAAELLYDHRRPPAGIHTWSDRVADDEIQPISGMNTTTPARTAL  120
            G SAAA+HG+KW+DA + AE++  +RR   G+  W +R+  DEI  + G   TTP RTAL
Sbjct  61   GFSAAALHGSKWIDAARPAEIIDTNRRHARGVRVWEERIESDEITVVDGTAVTTPVRTAL  120

Query  121  DLARRYPVGKAVAAIDALARATDLKLADVEMLAERYRGSRGIRNARIALDLVDPGAESPR  180
            DLARR+P G AVAAIDAL +AT+LK+ADVE+L +RYRG   I+ AR AL LVD GA+SP+
Sbjct  121  DLARRHPRGVAVAAIDALVQATELKMADVELLVDRYRGRHDIKAARAALALVDGGAQSPK  180

Query  181  ETWLRLLLIRAGFPRPQTQIPVYDEYGQLVAVIDMGWAGIKVGVDYEGDHHRTDRRTFNK  240
            E+WLR+LLI AGFPRPQTQIPV +E+G   A +DMGW  IKV  +Y+GD HR  R  + K
Sbjct  181  ESWLRVLLIDAGFPRPQTQIPVRNEWGWAEAYLDMGWEEIKVAAEYDGDQHRASRYQYVK  240

Query  241  DIKRAEALTELGWTDVRVTVEDTEGGII  268
            DI+R E L   GW  VRV  ED    II
Sbjct  241  DIRRLEMLERYGWIVVRVIAEDRPDEII  268


>gi|340626497|ref|YP_004744949.1| hypothetical protein MCAN_14991 [Mycobacterium canettii CIPT 
140010059]
 gi|340004687|emb|CCC43831.1| conserved hypothetical protein [Mycobacterium canettii CIPT 140010059]
Length=280

 Score =  301 bits (771),  Expect = 7e-80, Method: Compositional matrix adjust.
 Identities = 161/275 (59%), Positives = 194/275 (71%), Gaps = 1/275 (0%)

Query  1    VIEPFLGSEAIASGALTRHRLRSAYATIHPDVYVSPGADLTAWSRAQAAWLWSRRRGVIA  60
            + +PFLGSEA+A+G LT + LRS Y  +H DVYV  G +LTA  RA+A WL SRRRGV+A
Sbjct  1    MTDPFLGSEALAAGLLTPYELRSRYVALHKDVYVPQGVELTAQLRAKALWLRSRRRGVLA  60

Query  61   GQSAAAMHGAKWVDARQAAELLYDHRRPPAGIHTWSDRVADDEIQPISGMNTTTPARTAL  120
            G SA+A HGAKW+DA   A ++  +RR   G+  W +R+  DEI  I GM  TTP RTAL
Sbjct  61   GYSASAFHGAKWIDADLPAAIIDTNRRRAPGLQVWEERIEPDEICVIEGMRVTTPERTAL  120

Query  121  DLARRYPVGKAVAAIDALARATDLKLADVEMLAERYRGSRGIRNARIALDLVDPGAESPR  180
            DL  R+P+  AVAA+DAL +ATDLK+ADVE L ERYRG RG++ AR ALDLVD GA+SP+
Sbjct  121  DLTSRFPLDPAVAAVDALIQATDLKVADVEPLIERYRGRRGMKAARAALDLVDGGAQSPK  180

Query  181  ETWLRLLLIRAGFPRPQTQIPVYDEYGQLVAVIDMGWAGIKVGVDYEGDHHRTDRRTFNK  240
            ETWLRLLLIRAGFPRPQTQI V +E+G   A +DMGW  IKV  +Y+GDHH T R  + K
Sbjct  181  ETWLRLLLIRAGFPRPQTQIAVRNEWGWAEAHLDMGWQDIKVAAEYDGDHHLTSRYHYRK  240

Query  241  DIKRAEALTE-LGWTDVRVTVEDTEGGIIWRVSAA  274
            DI R E +    GW  VRV  ED    II RV  A
Sbjct  241  DILRHEKVQHRYGWIVVRVVAEDHPADIIRRVGEA  275


>gi|326903108|gb|EGE50041.1| hypothetical protein TBPG_00972 [Mycobacterium tuberculosis W-148]
Length=280

 Score =  301 bits (771),  Expect = 8e-80, Method: Compositional matrix adjust.
 Identities = 160/275 (59%), Positives = 194/275 (71%), Gaps = 1/275 (0%)

Query  1    VIEPFLGSEAIASGALTRHRLRSAYATIHPDVYVSPGADLTAWSRAQAAWLWSRRRGVIA  60
            + +PFLGSEA+A+G LT + LRS Y  +H DVYV  G +LTA  RA+A WL SRRRGV+A
Sbjct  1    MTDPFLGSEALAAGVLTPYELRSRYVALHKDVYVPQGVELTAQLRAKALWLRSRRRGVLA  60

Query  61   GQSAAAMHGAKWVDARQAAELLYDHRRPPAGIHTWSDRVADDEIQPISGMNTTTPARTAL  120
            G SA+A HGAKW+DA   A ++  +RR   G+  W +R+  DEI  I GM  TTP RTAL
Sbjct  61   GYSASAFHGAKWIDADLPAAIIDTNRRRAPGLQVWEERIEPDEICVIEGMRVTTPERTAL  120

Query  121  DLARRYPVGKAVAAIDALARATDLKLADVEMLAERYRGSRGIRNARIALDLVDPGAESPR  180
            DL  R+P+  AVAA+DAL +ATDLK+ADVE L ERYRG RG++ AR ALDLVD GA+SP+
Sbjct  121  DLTSRFPLDPAVAAVDALIQATDLKVADVEPLIERYRGRRGMKAARAALDLVDGGAQSPK  180

Query  181  ETWLRLLLIRAGFPRPQTQIPVYDEYGQLVAVIDMGWAGIKVGVDYEGDHHRTDRRTFNK  240
            ETWLRLLLIRAGFPRPQTQ+ V +E+G   A +DMGW  IKV  +Y+GDHH T R  + K
Sbjct  181  ETWLRLLLIRAGFPRPQTQVAVRNEWGWAEAHLDMGWQDIKVAAEYDGDHHLTSRYHYRK  240

Query  241  DIKRAEALTE-LGWTDVRVTVEDTEGGIIWRVSAA  274
            DI R E +    GW  VRV  ED    II RV  A
Sbjct  241  DILRHEKVQHRYGWIVVRVVAEDHPADIIRRVGEA  275


>gi|118462694|ref|YP_882478.1| hypothetical protein MAV_3296 [Mycobacterium avium 104]
 gi|118163981|gb|ABK64878.1| conserved hypothetical protein [Mycobacterium avium 104]
Length=292

 Score =  300 bits (769),  Expect = 1e-79, Method: Compositional matrix adjust.
 Identities = 156/268 (59%), Positives = 195/268 (73%), Gaps = 0/268 (0%)

Query  1    VIEPFLGSEAIASGALTRHRLRSAYATIHPDVYVSPGADLTAWSRAQAAWLWSRRRGVIA  60
            + +PFLGSEA+A+  L+RH LRS Y  +H DVYV+  A+LTA  RA+AAWL SRRRGV+A
Sbjct  14   MTDPFLGSEALAARLLSRHELRSRYVALHRDVYVARDAELTAVVRAKAAWLRSRRRGVLA  73

Query  61   GQSAAAMHGAKWVDARQAAELLYDHRRPPAGIHTWSDRVADDEIQPISGMNTTTPARTAL  120
            G SAAA+HG+KW+DA + AE++  +RR   G+  W +R+  DEI  + G   TTPARTAL
Sbjct  74   GFSAAALHGSKWIDAARPAEIIDTNRRHARGVRVWEERIESDEITVVDGTAVTTPARTAL  133

Query  121  DLARRYPVGKAVAAIDALARATDLKLADVEMLAERYRGSRGIRNARIALDLVDPGAESPR  180
            DLARR+P G AVAAIDAL +AT+LK+ADVE+L +RYRG   I+ AR AL LVD GA+SP+
Sbjct  134  DLARRHPRGVAVAAIDALVQATELKMADVELLVDRYRGRHDIKAARAALALVDGGAQSPK  193

Query  181  ETWLRLLLIRAGFPRPQTQIPVYDEYGQLVAVIDMGWAGIKVGVDYEGDHHRTDRRTFNK  240
            E+WLR+LLI AGFPRPQTQI V +E+G   A +DMGW  IKV  +Y+GD HR  R  + K
Sbjct  194  ESWLRVLLIDAGFPRPQTQIAVRNEWGWAEAYLDMGWEEIKVAAEYDGDQHRASRYQYVK  253

Query  241  DIKRAEALTELGWTDVRVTVEDTEGGII  268
            DI+R E L   GW  VRV  ED    II
Sbjct  254  DIRRLEMLERYGWIVVRVIAEDRPDEII  281


>gi|289447085|ref|ZP_06436829.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A]
 gi|289420043|gb|EFD17244.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A]
Length=280

 Score =  300 bits (767),  Expect = 2e-79, Method: Compositional matrix adjust.
 Identities = 160/275 (59%), Positives = 193/275 (71%), Gaps = 1/275 (0%)

Query  1    VIEPFLGSEAIASGALTRHRLRSAYATIHPDVYVSPGADLTAWSRAQAAWLWSRRRGVIA  60
            + +PFLGSEA+A+G LT + LRS Y  +H DVYV  G +LTA  RA+A WL SRRRGV+A
Sbjct  1    MTDPFLGSEALAAGVLTPYELRSRYVALHKDVYVPQGVELTAQLRAKALWLRSRRRGVLA  60

Query  61   GQSAAAMHGAKWVDARQAAELLYDHRRPPAGIHTWSDRVADDEIQPISGMNTTTPARTAL  120
            G SA+A HGAKW+DA   A ++  +RR   G+  W +R+  DEI  I GM  TTP RTAL
Sbjct  61   GYSASAFHGAKWIDADLPAAIIDTNRRRAPGLQVWEERIEPDEICVIEGMRVTTPERTAL  120

Query  121  DLARRYPVGKAVAAIDALARATDLKLADVEMLAERYRGSRGIRNARIALDLVDPGAESPR  180
            DL  R+P+  AVAA+DAL +ATDLK+ADVE L ERYRG RG++ AR ALDLVD GA+SP+
Sbjct  121  DLTSRFPLDPAVAAVDALIQATDLKVADVEPLIERYRGRRGMKAARAALDLVDGGAQSPK  180

Query  181  ETWLRLLLIRAGFPRPQTQIPVYDEYGQLVAVIDMGWAGIKVGVDYEGDHHRTDRRTFNK  240
            ETWLRLLLIRAGFPRPQ QI V +E+G   A +DMGW  IKV  +Y+GDHH T R  + K
Sbjct  181  ETWLRLLLIRAGFPRPQMQIAVRNEWGWAEAHLDMGWQDIKVAAEYDGDHHLTSRYHYRK  240

Query  241  DIKRAEALTE-LGWTDVRVTVEDTEGGIIWRVSAA  274
            DI R E +    GW  VRV  ED    II RV  A
Sbjct  241  DILRHEKVQHRYGWIVVRVVAEDHPADIIRRVGEA  275


>gi|118471729|ref|YP_889877.1| hypothetical protein MSMEG_5643 [Mycobacterium smegmatis str. 
MC2 155]
 gi|118173016|gb|ABK73912.1| conserved hypothetical protein [Mycobacterium smegmatis str. 
MC2 155]
Length=278

 Score =  299 bits (766),  Expect = 3e-79, Method: Compositional matrix adjust.
 Identities = 151/277 (55%), Positives = 195/277 (71%), Gaps = 1/277 (0%)

Query  3    EPFLGSEAIASGALTRHRLRSAYATIHPDVYVSPGADLTAWSRAQAAWLWSRRRGVIAGQ  62
            EPF+GSEA+A+G LTRH+LRS +  ++ D+YV  G   TA  RA+A WL SRRRGV+AG 
Sbjct  3    EPFIGSEALAAGTLTRHQLRSRFIAVYQDIYVEKGTLPTAILRAKACWLRSRRRGVLAGY  62

Query  63   SAAAMHGAKWVDARQAAELLYDHRRPPAGIHTWSDRVADDEIQPISGMNTTTPARTALDL  122
            SAAA+HGA+W+D    A +L  +RRP  G+  WSD + DDEI  I  M  TTP RTALDL
Sbjct  63   SAAALHGARWIDPGLPAYILDTNRRPARGVVVWSDAIEDDEICLIGDMRVTTPVRTALDL  122

Query  123  ARRYPVGKAVAAIDALARATDLKLADVEMLAERYRGSRGIRNARIALDLVDPGAESPRET  182
            A ++P   AV AID+LARA  LK+AD+E+ AE +   RGIR AR  + LVDPGAESPRET
Sbjct  123  ACKFPEDVAVPAIDSLARAAKLKVADIELAAEHHAARRGIRQARTIIALVDPGAESPRET  182

Query  183  WLRLLLIRAGFPRPQTQIPVYDEYGQLVAVIDMGWAGIKVGVDYEGDHHRTDRRTFNKDI  242
            WLRL+++RAG+P PQTQ  V +EYG L+  +DM W  +K+ ++YEG HH TD  T  KDI
Sbjct  183  WLRLVVVRAGYPPPQTQYAVLNEYGALIGEVDMAWPELKIALEYEGQHH-TDPVTLRKDI  241

Query  243  KRAEALTELGWTDVRVTVEDTEGGIIWRVSAAWQRRT  279
            +RA+ + E GW  +RVT  D E  ++ RV+ AW  R+
Sbjct  242  QRADEMMENGWIVIRVTARDGEATVLKRVAKAWASRS  278


>gi|254231713|ref|ZP_04925040.1| conserved hypothetical protein [Mycobacterium tuberculosis C]
 gi|124600772|gb|EAY59782.1| conserved hypothetical protein [Mycobacterium tuberculosis C]
Length=280

 Score =  296 bits (758),  Expect = 2e-78, Method: Compositional matrix adjust.
 Identities = 159/275 (58%), Positives = 192/275 (70%), Gaps = 1/275 (0%)

Query  1    VIEPFLGSEAIASGALTRHRLRSAYATIHPDVYVSPGADLTAWSRAQAAWLWSRRRGVIA  60
            + +PFL SEA+A+G LT + LRS Y  +H DVYV  G +LTA  RA+A WL SRRRGV+A
Sbjct  1    MTDPFLDSEALAAGVLTPYELRSRYVALHKDVYVPQGVELTAQLRAKALWLRSRRRGVLA  60

Query  61   GQSAAAMHGAKWVDARQAAELLYDHRRPPAGIHTWSDRVADDEIQPISGMNTTTPARTAL  120
            G SA+A HGAKW+DA   A ++  +RR   G+  W +R+  DEI  I GM  TTP RTAL
Sbjct  61   GYSASAFHGAKWIDADLPAAIIDTNRRRAPGLQVWEERIEPDEICVIEGMRVTTPERTAL  120

Query  121  DLARRYPVGKAVAAIDALARATDLKLADVEMLAERYRGSRGIRNARIALDLVDPGAESPR  180
            DL  R+P+  AVAA+DA  +ATDLK+ADVE L ERYRG RG++ AR ALDLVD GA+SP+
Sbjct  121  DLTSRFPLDPAVAAVDAHIQATDLKVADVEPLIERYRGRRGMKAARAALDLVDGGAQSPK  180

Query  181  ETWLRLLLIRAGFPRPQTQIPVYDEYGQLVAVIDMGWAGIKVGVDYEGDHHRTDRRTFNK  240
            ETWLRLLLIRAGFPRPQTQI V +E+G   A +DMGW  IKV  +Y+GDHH T R  + K
Sbjct  181  ETWLRLLLIRAGFPRPQTQIAVRNEWGWAEAHLDMGWQDIKVAAEYDGDHHLTSRYHYRK  240

Query  241  DIKRAEALTE-LGWTDVRVTVEDTEGGIIWRVSAA  274
            DI R E +    GW  VRV  ED    II RV  A
Sbjct  241  DILRHEKVQHRYGWIVVRVVAEDHPADIIRRVGEA  275


>gi|126432699|ref|YP_001068390.1| hypothetical protein Mjls_0086 [Mycobacterium sp. JLS]
 gi|126232499|gb|ABN95899.1| conserved hypothetical protein [Mycobacterium sp. JLS]
Length=278

 Score =  296 bits (757),  Expect = 3e-78, Method: Compositional matrix adjust.
 Identities = 146/275 (54%), Positives = 199/275 (73%), Gaps = 1/275 (0%)

Query  3    EPFLGSEAIASGALTRHRLRSAYATIHPDVYVSPGADLTAWSRAQAAWLWSRRRGVIAGQ  62
            EPF+GS A+ +GALTRH LR+ +  +H DVY+   A++TA  RA+AAWL +R  GV+AG 
Sbjct  3    EPFIGSAALEAGALTRHALRTRFVAVHHDVYLPRDAEVTAVVRAKAAWLRTRGHGVLAGF  62

Query  63   SAAAMHGAKWVDARQAAELLYDHRRPPAGIHTWSDRVADDEIQPISGMNTTTPARTALDL  122
            SA+A+HGA+W+D  + A ++  +RR    +  W+DR+ DDEI  + G+  TTP RTA+DL
Sbjct  63   SASALHGARWIDPGRPATVIDANRRRTRALEVWADRLEDDEIGEVDGIRVTTPVRTAVDL  122

Query  123  ARRYPVGKAVAAIDALARATDLKLADVEMLAERYRGSRGIRNARIALDLVDPGAESPRET  182
            ARRYP+  AVAAIDALARAT + + DV M A    G  G+  AR A++LVD GAESP+ET
Sbjct  123  ARRYPLNTAVAAIDALARATRISVDDV-MAATFRPGRHGMSRARKAIELVDAGAESPKET  181

Query  183  WLRLLLIRAGFPRPQTQIPVYDEYGQLVAVIDMGWAGIKVGVDYEGDHHRTDRRTFNKDI  242
            WLRL++IRAGFPRP+TQ+PVY+EYG L+ V+D+GW   ++ V+YEG HHR  R  F+KDI
Sbjct  182  WLRLVIIRAGFPRPETQVPVYNEYGVLIGVVDIGWQDRRLAVEYEGKHHRMTRSAFDKDI  241

Query  243  KRAEALTELGWTDVRVTVEDTEGGIIWRVSAAWQR  277
            +R E + E GW+ VR+T  D+E  ++ R+  AW R
Sbjct  242  RRLEEMIECGWSVVRITAADSEATVVRRLRVAWDR  276


>gi|296170707|ref|ZP_06852282.1| conserved hypothetical protein [Mycobacterium parascrofulaceum 
ATCC BAA-614]
 gi|295894696|gb|EFG74430.1| conserved hypothetical protein [Mycobacterium parascrofulaceum 
ATCC BAA-614]
Length=281

 Score =  294 bits (753),  Expect = 9e-78, Method: Compositional matrix adjust.
 Identities = 149/266 (57%), Positives = 190/266 (72%), Gaps = 0/266 (0%)

Query  3    EPFLGSEAIASGALTRHRLRSAYATIHPDVYVSPGADLTAWSRAQAAWLWSRRRGVIAGQ  62
            EPF+GSEA+A+G L +  LR+ Y  +  DVYV PGA+LT   RA+AAWLWSRRRG++AG 
Sbjct  3    EPFIGSEAVANGELVKSALRTRYRKLFRDVYVDPGAELTPLIRARAAWLWSRRRGIVAGL  62

Query  63   SAAAMHGAKWVDARQAAELLYDHRRPPAGIHTWSDRVADDEIQPISGMNTTTPARTALDL  122
            SAAA+HGA+WVDA    E+L+ +R P  G+   SDR+ DDE   I G+  TTPARTA+D+
Sbjct  63   SAAAVHGAQWVDAAAPVEMLHSNRNPLPGLRIHSDRLEDDEFTLIDGVPVTTPARTAVDV  122

Query  123  ARRYPVGKAVAAIDALARATDLKLADVEMLAERYRGSRGIRNARIALDLVDPGAESPRET  182
               +P   AVAAID L RATD K+A+++MLAER+ G RGI++AR A++L D GA+SP+ET
Sbjct  123  GCWHPTNDAVAAIDDLLRATDSKVAELQMLAERHPGRRGIQSARDAINLADAGAQSPKET  182

Query  183  WLRLLLIRAGFPRPQTQIPVYDEYGQLVAVIDMGWAGIKVGVDYEGDHHRTDRRTFNKDI  242
            W+RLLLIRAG PRPQTQIPV DE G L   +DMGW   KV  +Y+G+ HR DR  +  DI
Sbjct  183  WVRLLLIRAGLPRPQTQIPVSDECGDLTYYLDMGWEDCKVAAEYDGEQHRRDRWQYTWDI  242

Query  243  KRAEALTELGWTDVRVTVEDTEGGII  268
            +R E L  LGW  +RV V D    I+
Sbjct  243  RRRETLERLGWIVIRVVVNDRPADIV  268


>gi|118467074|ref|YP_882533.1| hypothetical protein MAV_3351 [Mycobacterium avium 104]
 gi|118168361|gb|ABK69258.1| conserved hypothetical protein [Mycobacterium avium 104]
Length=283

 Score =  294 bits (752),  Expect = 1e-77, Method: Compositional matrix adjust.
 Identities = 149/278 (54%), Positives = 195/278 (71%), Gaps = 0/278 (0%)

Query  1    VIEPFLGSEAIASGALTRHRLRSAYATIHPDVYVSPGADLTAWSRAQAAWLWSRRRGVIA  60
            ++EPF+GSEA+A G + +  LR+ Y  +  DVY+ PGA+L+A +RA+A WLWSRRRGVIA
Sbjct  1    MVEPFIGSEAVADGEVVKSALRTRYKRLFRDVYIHPGAELSALTRARAGWLWSRRRGVIA  60

Query  61   GQSAAAMHGAKWVDARQAAELLYDHRRPPAGIHTWSDRVADDEIQPISGMNTTTPARTAL  120
            G SAAA+HGA+WVDA    E+L+ +R P  G+   SDR+  DE   + G+  TTPARTA+
Sbjct  61   GLSAAAVHGARWVDATAPLEILHSNRNPLPGLRIHSDRLESDEYALVDGVPVTTPARTAV  120

Query  121  DLARRYPVGKAVAAIDALARATDLKLADVEMLAERYRGSRGIRNARIALDLVDPGAESPR  180
            DL   +PV  AVA ID L RATD K+A+ ++LA+RY G RG+++AR A+ L D GA+SP+
Sbjct  121  DLGCWHPVNDAVAVIDDLLRATDCKVAECQLLADRYPGRRGMQSARAAIGLADAGAQSPK  180

Query  181  ETWLRLLLIRAGFPRPQTQIPVYDEYGQLVAVIDMGWAGIKVGVDYEGDHHRTDRRTFNK  240
            ETWLRLLLIRAG PRPQTQIPV DE+G +   +DMGW    V  +Y+G+ HR DR  +  
Sbjct  181  ETWLRLLLIRAGLPRPQTQIPVSDEFGGVTYYLDMGWEDFMVAAEYDGEQHRRDRWQYTW  240

Query  241  DIKRAEALTELGWTDVRVTVEDTEGGIIWRVSAAWQRR  278
            DI+R E L  LGW  ++V   D    I+ RVSAA  RR
Sbjct  241  DIRRRETLERLGWIVIQVVAGDRPADIVSRVSAALARR  278


>gi|336457984|gb|EGO36971.1| hypothetical protein MAPs_16820 [Mycobacterium avium subsp. paratuberculosis 
S397]
Length=293

 Score =  293 bits (750),  Expect = 2e-77, Method: Compositional matrix adjust.
 Identities = 149/278 (54%), Positives = 195/278 (71%), Gaps = 0/278 (0%)

Query  1    VIEPFLGSEAIASGALTRHRLRSAYATIHPDVYVSPGADLTAWSRAQAAWLWSRRRGVIA  60
            ++EPF+GSEA+A G + +  LR+ Y  +  DVY+ PGA+L+A +RA+A WLWSRRRGVIA
Sbjct  1    MVEPFIGSEAVADGEVVKSALRTRYKRLFRDVYIHPGAELSALTRARAGWLWSRRRGVIA  60

Query  61   GQSAAAMHGAKWVDARQAAELLYDHRRPPAGIHTWSDRVADDEIQPISGMNTTTPARTAL  120
            G SAAA+HGA+WVDA    E+L+ +R P  G+   SDR+  DE   I G+  TTPARTA+
Sbjct  61   GLSAAAVHGARWVDATAPLEILHSNRNPLPGLRIHSDRLESDEYALIDGVPVTTPARTAV  120

Query  121  DLARRYPVGKAVAAIDALARATDLKLADVEMLAERYRGSRGIRNARIALDLVDPGAESPR  180
            DL   +PV  AVA ID L RATD K+A+ ++LA+RY G RG+++AR A+ L D GA+SP+
Sbjct  121  DLGCWHPVNDAVAVIDDLLRATDCKVAECQLLADRYPGRRGMQSARAAIGLADAGAQSPK  180

Query  181  ETWLRLLLIRAGFPRPQTQIPVYDEYGQLVAVIDMGWAGIKVGVDYEGDHHRTDRRTFNK  240
            ETWLRLLLIRAG PRPQTQIPV +E+G +   +DMGW    V  +Y+G+ HR DR  +  
Sbjct  181  ETWLRLLLIRAGLPRPQTQIPVSEEFGGVTYYLDMGWEDFMVAAEYDGEQHRRDRWQYTW  240

Query  241  DIKRAEALTELGWTDVRVTVEDTEGGIIWRVSAAWQRR  278
            DI+R E L  LGW  ++V   D    I+ RVSAA  RR
Sbjct  241  DIRRRETLERLGWIVIQVVAGDRPADIVSRVSAALARR  278


>gi|169628660|ref|YP_001702309.1| hypothetical protein MAB_1570 [Mycobacterium abscessus ATCC 19977]
 gi|169240627|emb|CAM61655.1| Conserved hypothetical protein [Mycobacterium abscessus]
Length=279

 Score =  292 bits (747),  Expect = 4e-77, Method: Compositional matrix adjust.
 Identities = 153/277 (56%), Positives = 194/277 (71%), Gaps = 0/277 (0%)

Query  3    EPFLGSEAIASGALTRHRLRSAYATIHPDVYVSPGADLTAWSRAQAAWLWSRRRGVIAGQ  62
            EPF+GSEA+ SG LT + LR+ Y  IHPDVY+  GA LT   RAQA+WLW+ RRG++AG 
Sbjct  3    EPFVGSEAVRSGRLTAYALRTRYVAIHPDVYLPRGAQLTPLVRAQASWLWTGRRGILAGH  62

Query  63   SAAAMHGAKWVDARQAAELLYDHRRPPAGIHTWSDRVADDEIQPISGMNTTTPARTALDL  122
            SA+A+HGA+W+DA + AE+++D+R    GI  WS  +A DEI  + GM  TT ARTALDL
Sbjct  63   SASALHGARWIDAARNAEIVHDNRHRQPGITVWSGEIAPDEICVVRGMRATTAARTALDL  122

Query  123  ARRYPVGKAVAAIDALARATDLKLADVEMLAERYRGSRGIRNARIALDLVDPGAESPRET  182
            A R P G+AVAAIDAL RAT+L++++   LA R+ G RGIR AR A +LVD GA+SP+ET
Sbjct  123  ACRCPRGRAVAAIDALCRATELQISEALELASRHAGMRGIRRARTAFELVDAGAQSPKET  182

Query  183  WLRLLLIRAGFPRPQTQIPVYDEYGQLVAVIDMGWAGIKVGVDYEGDHHRTDRRTFNKDI  242
            WLRLLL  AG P   TQI V++     +A IDMGW  + VG++Y+GD HR+DRR + KDI
Sbjct  183  WLRLLLRDAGLPPVSTQILVHNGDFVALAYIDMGWEDVMVGIEYDGDQHRSDRRQYLKDI  242

Query  243  KRAEALTELGWTDVRVTVEDTEGGIIWRVSAAWQRRT  279
            +R E L  +GW  VRV  ED    II RV  A  RR 
Sbjct  243  RRLEMLEGMGWLIVRVVAEDHPHDIIRRVREALARRV  279


>gi|333991682|ref|YP_004524296.1| hypothetical protein JDM601_3042 [Mycobacterium sp. JDM601]
 gi|333487650|gb|AEF37042.1| conserved hypothetical protein [Mycobacterium sp. JDM601]
Length=222

 Score =  292 bits (747),  Expect = 4e-77, Method: Compositional matrix adjust.
 Identities = 146/220 (67%), Positives = 174/220 (80%), Gaps = 0/220 (0%)

Query  60   AGQSAAAMHGAKWVDARQAAELLYDHRRPPAGIHTWSDRVADDEIQPISGMNTTTPARTA  119
            AGQSAAA+HGAKW+DA   AEL + +RRPP GI TW+D +A+DE++ + G+  TTP RTA
Sbjct  3    AGQSAAALHGAKWIDAGSPAELHHVNRRPPPGIRTWADELAEDEVEVVRGIPVTTPLRTA  62

Query  120  LDLARRYPVGKAVAAIDALARATDLKLADVEMLAERYRGSRGIRNARIALDLVDPGAESP  179
             DLA RY +  AVAAIDALAR+T LK+ D+E+ A+RY G RGIR AR A+DLVDPGAESP
Sbjct  63   FDLASRYRLEPAVAAIDALARSTRLKVPDIELFAQRYPGHRGIRKARRAIDLVDPGAESP  122

Query  180  RETWLRLLLIRAGFPRPQTQIPVYDEYGQLVAVIDMGWAGIKVGVDYEGDHHRTDRRTFN  239
            RETWLRLLLIRAGFPRP TQIPVY +YG+L+AV+DMGW  IKVGVDYEGDHHR   R F 
Sbjct  123  RETWLRLLLIRAGFPRPTTQIPVYGDYGELIAVLDMGWEEIKVGVDYEGDHHRLSARQFG  182

Query  240  KDIKRAEALTELGWTDVRVTVEDTEGGIIWRVSAAWQRRT  279
             DI+RAEA+ + GW DVR+T +DT GGII RV+ A   R 
Sbjct  183  HDIRRAEAVAKRGWIDVRITKDDTIGGIIGRVADARAHRV  222


>gi|254775793|ref|ZP_05217309.1| hypothetical protein MaviaA2_14145 [Mycobacterium avium subsp. 
avium ATCC 25291]
Length=283

 Score =  291 bits (744),  Expect = 9e-77, Method: Compositional matrix adjust.
 Identities = 149/278 (54%), Positives = 195/278 (71%), Gaps = 0/278 (0%)

Query  1    VIEPFLGSEAIASGALTRHRLRSAYATIHPDVYVSPGADLTAWSRAQAAWLWSRRRGVIA  60
            ++EPF+GSEA+A G + +  LR+ Y  +  DVY+ PGA+L+A +RA+A WLWSRRRGVIA
Sbjct  1    MVEPFIGSEAVADGEVVKSALRTRYKRLFRDVYIHPGAELSALTRARAGWLWSRRRGVIA  60

Query  61   GQSAAAMHGAKWVDARQAAELLYDHRRPPAGIHTWSDRVADDEIQPISGMNTTTPARTAL  120
            G SAAA+HGA+WVDA    E+L+ +R P  G+   SDR+  DE   I G+  TTPARTA+
Sbjct  61   GLSAAAVHGARWVDATAPLEILHSNRNPLPGLRIHSDRLESDEYALIDGVPVTTPARTAV  120

Query  121  DLARRYPVGKAVAAIDALARATDLKLADVEMLAERYRGSRGIRNARIALDLVDPGAESPR  180
            DL   + V  AVA ID L RATD K+A+ ++LA+RY G RG+++AR A+ L D GA+SP+
Sbjct  121  DLGCWHRVNDAVAVIDDLLRATDCKVAECQLLADRYPGRRGMQSARAAIGLADAGAQSPK  180

Query  181  ETWLRLLLIRAGFPRPQTQIPVYDEYGQLVAVIDMGWAGIKVGVDYEGDHHRTDRRTFNK  240
            ETWLRLLLIRAG PRPQTQIPV DE+G +   +DMGW  + V  +Y+G+ HR DR  +  
Sbjct  181  ETWLRLLLIRAGLPRPQTQIPVSDEFGGVTYYLDMGWEDLMVAAEYDGEQHRRDRWQYTW  240

Query  241  DIKRAEALTELGWTDVRVTVEDTEGGIIWRVSAAWQRR  278
            DI+R E L  LGW  ++V   D    I+ RVSAA  RR
Sbjct  241  DIRRRETLERLGWIVIQVVAGDRPADIVSRVSAALARR  278


>gi|2183264|gb|AAC46200.1| MAV346 [Mycobacterium avium]
Length=346

 Score =  286 bits (733),  Expect = 2e-75, Method: Compositional matrix adjust.
 Identities = 155/269 (58%), Positives = 194/269 (73%), Gaps = 2/269 (0%)

Query  1    VIEPFLGSEAIASGALTRHRLRSAYATIHPDVYVSPGADLTAWSRAQAAWLWSRRRGVIA  60
            + +PFLGSEA+A+  L+RH LRS Y  +H DVYV+  A+LTA  RA+AAWL SRRRGV+A
Sbjct  68   MTDPFLGSEALAARLLSRHELRSRYVALHRDVYVARDAELTAVVRAKAAWLRSRRRGVLA  127

Query  61   GQSAAAMHGAKWVDARQAAELLYDHRRPPAGIHTWSDRVADDEIQPISGMNTTTPARTAL  120
            G SAAA+HG+KW+DA + AE++  +RR   G+  W +R+  DEI  + GM  TTPARTAL
Sbjct  128  GFSAAALHGSKWIDAARPAEIIDTNRRHARGVPLWEERIECDEITVVDGMAVTTPARTAL  187

Query  121  DLARRYPVGKAVAAID-ALARATDLKLADVEMLAERYRGSRGIRNARIALDLVDPGAESP  179
            DLARR+P+G AVAAID    +AT+LK+ADVE+L   YRG   I+ AR AL LVD GA+SP
Sbjct  188  DLARRHPMGVAVAAIDRPWVQATELKMADVELLVS-YRGRHDIKAARAALALVDGGAQSP  246

Query  180  RETWLRLLLIRAGFPRPQTQIPVYDEYGQLVAVIDMGWAGIKVGVDYEGDHHRTDRRTFN  239
            +E+WLR+LLI AGFPRPQTQIPV +E+G   A +DMGW  IKV  +Y+GD HR  R  + 
Sbjct  247  KESWLRVLLIDAGFPRPQTQIPVRNEWGWAEAYLDMGWEEIKVAAEYDGDQHRASRYQYV  306

Query  240  KDIKRAEALTELGWTDVRVTVEDTEGGII  268
            KDI+R E L   GW  VRV  ED    II
Sbjct  307  KDIRRLEMLDGYGWIVVRVIAEDRPDEII  335


>gi|254773579|ref|ZP_05215095.1| hypothetical protein MaviaA2_02730 [Mycobacterium avium subsp. 
avium ATCC 25291]
Length=279

 Score =  277 bits (709),  Expect = 1e-72, Method: Compositional matrix adjust.
 Identities = 145/266 (55%), Positives = 184/266 (70%), Gaps = 0/266 (0%)

Query  3    EPFLGSEAIASGALTRHRLRSAYATIHPDVYVSPGADLTAWSRAQAAWLWSRRRGVIAGQ  62
            EPFLGSEA+A G LTR RL + Y  +  DVYVS   ++TA  RA+A WLWS RRGV+AG 
Sbjct  3    EPFLGSEAVARGVLTRSRLSTGYTRLFRDVYVSRDHEVTAVLRARAGWLWSGRRGVVAGF  62

Query  63   SAAAMHGAKWVDARQAAELLYDHRRPPAGIHTWSDRVADDEIQPISGMNTTTPARTALDL  122
            SAAA+HG+KWVDA    +L++ +R    GI    +R+ +DEI  + G+  T+ +RTALDL
Sbjct  63   SAAALHGSKWVDAMTVVDLIHHNRHRQPGIRVHEERIEEDEIAVVEGILVTSASRTALDL  122

Query  123  ARRYPVGKAVAAIDALARATDLKLADVEMLAERYRGSRGIRNARIALDLVDPGAESPRET  182
               YP   AVA IDALAR T +K ADVE+LA+RY G RGI  AR A+ L D G++SP+E+
Sbjct  123  GCWYPTTAAVAGIDALARETRIKAADVELLAQRYPGRRGIVRAREAIALFDGGSQSPKES  182

Query  183  WLRLLLIRAGFPRPQTQIPVYDEYGQLVAVIDMGWAGIKVGVDYEGDHHRTDRRTFNKDI  242
            WLR++L RAG P PQTQI V D+ G  VA +DMGW  +KV V+Y+GDHHR+DRR +  DI
Sbjct  183  WLRVVLTRAGLPPPQTQIRVVDDLGDAVAYLDMGWEDLKVAVEYDGDHHRSDRRQYGWDI  242

Query  243  KRAEALTELGWTDVRVTVEDTEGGII  268
            +R+E L  LGW  VRV   D    II
Sbjct  243  RRSEMLQRLGWIVVRVVAGDRPADII  268


>gi|240172475|ref|ZP_04751134.1| hypothetical protein MkanA1_24385 [Mycobacterium kansasii ATCC 
12478]
Length=285

 Score =  275 bits (703),  Expect = 6e-72, Method: Compositional matrix adjust.
 Identities = 141/276 (52%), Positives = 190/276 (69%), Gaps = 0/276 (0%)

Query  3    EPFLGSEAIASGALTRHRLRSAYATIHPDVYVSPGADLTAWSRAQAAWLWSRRRGVIAGQ  62
            EPF+GSEA+ SG L  H+LRS +  ++PDVYV     LT   RA AAWLWS RRGV+AG 
Sbjct  5    EPFVGSEAVRSGTLRPHQLRSRFRAVYPDVYVRRDQQLTLHQRAVAAWLWSHRRGVLAGL  64

Query  63   SAAAMHGAKWVDARQAAELLYDHRRPPAGIHTWSDRVADDEIQPISGMNTTTPARTALDL  122
            +AAA HG+KWVD     EL++ + RPP G+ T+  R+  +E   + G+  TTP RTA D+
Sbjct  65   TAAAWHGSKWVDELLPVELVWSNARPPRGLRTYDVRLRPEEHDVVGGIPVTTPQRTAYDI  124

Query  123  ARRYPVGKAVAAIDALARATDLKLADVEMLAERYRGSRGIRNARIALDLVDPGAESPRET  182
             RR P+G A+A +DAL  ATD+K+A+V  +A+R+RG+RG+R    AL+LVD G++SP+E+
Sbjct  125  GRRKPMGTAIAHLDALLGATDVKVAEVAEVADRHRGARGLRQLESALELVDTGSQSPKES  184

Query  183  WLRLLLIRAGFPRPQTQIPVYDEYGQLVAVIDMGWAGIKVGVDYEGDHHRTDRRTFNKDI  242
            WLRLL+I AG PRP TQIPV    G  +  +DMGW  + V V+Y+G+HHR DR  + +DI
Sbjct  185  WLRLLIIGAGLPRPTTQIPVAPSDGTRMYYLDMGWPDLMVAVEYDGEHHRLDRWQYTRDI  244

Query  243  KRAEALTELGWTDVRVTVEDTEGGIIWRVSAAWQRR  278
            +R+EAL  LGW  VRV   D+   II R+ AA + R
Sbjct  245  RRSEALERLGWLVVRVVATDSPADIIRRIRAALEFR  280


>gi|41406626|ref|NP_959462.1| hypothetical protein MAP0528 [Mycobacterium avium subsp. paratuberculosis 
K-10]
 gi|41394975|gb|AAS02845.1| hypothetical protein MAP_0528 [Mycobacterium avium subsp. paratuberculosis 
K-10]
Length=279

 Score =  275 bits (702),  Expect = 8e-72, Method: Compositional matrix adjust.
 Identities = 145/266 (55%), Positives = 183/266 (69%), Gaps = 0/266 (0%)

Query  3    EPFLGSEAIASGALTRHRLRSAYATIHPDVYVSPGADLTAWSRAQAAWLWSRRRGVIAGQ  62
            EPFLGSEA+A G LTR RL + Y  +  DVYVS   ++TA  RA+A WLWS RR V+AG 
Sbjct  3    EPFLGSEAVARGVLTRSRLSTGYTRLFRDVYVSRDDEVTAVLRARAGWLWSGRRAVVAGF  62

Query  63   SAAAMHGAKWVDARQAAELLYDHRRPPAGIHTWSDRVADDEIQPISGMNTTTPARTALDL  122
            SAAA+HG+KWVDA    +L++ +R    GI    DR+ +DEI  + G+  T+ ARTALDL
Sbjct  63   SAAALHGSKWVDAMTVVDLIHHNRYRQPGIRVHGDRIEEDEITVVDGILVTSAARTALDL  122

Query  123  ARRYPVGKAVAAIDALARATDLKLADVEMLAERYRGSRGIRNARIALDLVDPGAESPRET  182
               YP   AVA IDALAR T +K ADVE+LA+RY G RGI  AR A+ L D G++SP+E+
Sbjct  123  GCWYPTTAAVAGIDALARETRIKAADVELLAQRYPGRRGIVRAREAIALFDGGSQSPKES  182

Query  183  WLRLLLIRAGFPRPQTQIPVYDEYGQLVAVIDMGWAGIKVGVDYEGDHHRTDRRTFNKDI  242
            WLR++L +AG P PQTQI V D+ G  VA +DMGW  +KV V+Y+GDHHR+DRR +  DI
Sbjct  183  WLRVVLTQAGLPPPQTQIRVVDDLGDPVAYLDMGWEDLKVAVEYDGDHHRSDRRQYGWDI  242

Query  243  KRAEALTELGWTDVRVTVEDTEGGII  268
            +R+E L  LGW  VRV   D    II
Sbjct  243  RRSEMLQRLGWIVVRVVAGDRPADII  268


>gi|336458416|gb|EGO37390.1| hypothetical protein MAPs_13110 [Mycobacterium avium subsp. paratuberculosis 
S397]
Length=279

 Score =  272 bits (695),  Expect = 4e-71, Method: Compositional matrix adjust.
 Identities = 144/266 (55%), Positives = 182/266 (69%), Gaps = 0/266 (0%)

Query  3    EPFLGSEAIASGALTRHRLRSAYATIHPDVYVSPGADLTAWSRAQAAWLWSRRRGVIAGQ  62
            EPFLGSEA+A G LTR RL + Y  +  DVYVS   ++TA  RA+A WLWS RR V+AG 
Sbjct  3    EPFLGSEAVARGVLTRSRLSTGYTRLFRDVYVSRDDEVTAVLRARAGWLWSGRRAVVAGF  62

Query  63   SAAAMHGAKWVDARQAAELLYDHRRPPAGIHTWSDRVADDEIQPISGMNTTTPARTALDL  122
            SAAA+HG+KWVDA    +L++ +R    GI    DR+ +DEI  + G+  T+ ARTALDL
Sbjct  63   SAAALHGSKWVDAMTVVDLIHHNRYRQPGIRVHGDRIEEDEITVVDGILVTSAARTALDL  122

Query  123  ARRYPVGKAVAAIDALARATDLKLADVEMLAERYRGSRGIRNARIALDLVDPGAESPRET  182
               YP   AVA IDALAR T +K ADVE+LA+RY G RGI  AR A+ L D G++SP+E+
Sbjct  123  GCWYPTTAAVAGIDALARETRIKAADVELLAQRYPGRRGIVRAREAIALFDGGSQSPKES  182

Query  183  WLRLLLIRAGFPRPQTQIPVYDEYGQLVAVIDMGWAGIKVGVDYEGDHHRTDRRTFNKDI  242
            WLR++L + G P PQTQI V D+ G  VA +DMGW  +KV V+Y+GDHHR+DRR +  DI
Sbjct  183  WLRVVLPQGGLPPPQTQIRVVDDLGDPVAYLDMGWEDLKVAVEYDGDHHRSDRRQYGWDI  242

Query  243  KRAEALTELGWTDVRVTVEDTEGGII  268
            +R+E L  LGW  VRV   D    II
Sbjct  243  RRSEMLQRLGWIVVRVVAGDRPADII  268


>gi|342862365|ref|ZP_08719005.1| hypothetical protein MCOL_25858 [Mycobacterium colombiense CECT 
3035]
 gi|342130036|gb|EGT83370.1| hypothetical protein MCOL_25858 [Mycobacterium colombiense CECT 
3035]
Length=287

 Score =  269 bits (688),  Expect = 3e-70, Method: Compositional matrix adjust.
 Identities = 139/278 (50%), Positives = 193/278 (70%), Gaps = 0/278 (0%)

Query  1    VIEPFLGSEAIASGALTRHRLRSAYATIHPDVYVSPGADLTAWSRAQAAWLWSRRRGVIA  60
            ++ PF+GSEAIA+G LT+  L + +  + PD+YV     +TA  R +A WLW+  RGV+A
Sbjct  7    MVGPFIGSEAIAAGMLTKSELATRFRRLFPDIYVERDVAITAELRTKAGWLWTGYRGVVA  66

Query  61   GQSAAAMHGAKWVDARQAAELLYDHRRPPAGIHTWSDRVADDEIQPISGMNTTTPARTAL  120
            G +AAA++G+KW D     +L++D+RR P G+ T  DR+  DEI+ ++GM  T+P RTAL
Sbjct  67   GFAAAALYGSKWADDAPVVDLIHDNRRSPLGLRTHRDRIEQDEIELVAGMPVTSPVRTAL  126

Query  121  DLARRYPVGKAVAAIDALARATDLKLADVEMLAERYRGSRGIRNARIALDLVDPGAESPR  180
            D+   YP+  AVAAIDALAR T++K  D+E+LA RY G RG+  AR A+ L D GA+SP+
Sbjct  127  DIGCWYPLMTAVAAIDALARVTEIKAVDIELLARRYLGRRGVARARQAVGLFDSGAQSPK  186

Query  181  ETWLRLLLIRAGFPRPQTQIPVYDEYGQLVAVIDMGWAGIKVGVDYEGDHHRTDRRTFNK  240
            E+WLR++LI+AG PRPQTQIPV +E+G ++A +DMGW  +KV V+Y+G+ HRTDR  +  
Sbjct  187  ESWLRVVLIQAGLPRPQTQIPVLNEFGTVIAYLDMGWEELKVAVEYDGEQHRTDRNQYTW  246

Query  241  DIKRAEALTELGWTDVRVTVEDTEGGIIWRVSAAWQRR  278
            D++R E L  LGW  VRV   D    I+ RV  A  RR
Sbjct  247  DLRRLETLERLGWIVVRVVAGDRPAEIVSRVRGALARR  284


>gi|108801239|ref|YP_641436.1| hypothetical protein Mmcs_4275 [Mycobacterium sp. MCS]
 gi|119870390|ref|YP_940342.1| hypothetical protein Mkms_4361 [Mycobacterium sp. KMS]
 gi|108771658|gb|ABG10380.1| conserved hypothetical protein [Mycobacterium sp. MCS]
 gi|119696479|gb|ABL93552.1| conserved hypothetical protein [Mycobacterium sp. KMS]
Length=289

 Score =  266 bits (681),  Expect = 2e-69, Method: Compositional matrix adjust.
 Identities = 142/274 (52%), Positives = 180/274 (66%), Gaps = 0/274 (0%)

Query  5    FLGSEAIASGALTRHRLRSAYATIHPDVYVSPGADLTAWSRAQAAWLWSRRRGVIAGQSA  64
             LGSEAI  G ++R  LRSAY TI PDVY+   A+ + ++    AWLWS+RR VI G++A
Sbjct  5    ILGSEAIDRGEVSRQGLRSAYRTIFPDVYIPAVAEPSLYANTVGAWLWSKRRAVITGKAA  64

Query  65   AAMHGAKWVDARQAAELLYDHRRPPAGIHTWSDRVADDEIQPISGMNTTTPARTALDLAR  124
            AA+HGA+WVD     EL++ + RPP GI T +DR   DE+  I G+   +  RTA DL R
Sbjct  65   AALHGAEWVDENSPVELIWRNNRPPHGIVTRNDRFTCDEVVEIYGLAVASIQRTAFDLGR  124

Query  125  RYPVGKAVAAIDALARATDLKLADVEMLAERYRGSRGIRNARIALDLVDPGAESPRETWL  184
              P G+AVA +DALARAT L +  V  LAE+YRG+RG+R  R AL L+D GA+SPRETWL
Sbjct  125  FLPRGEAVAHLDALARATGLAVDHVLPLAEQYRGARGVRRCREALGLMDGGAQSPRETWL  184

Query  185  RLLLIRAGFPRPQTQIPVYDEYGQLVAVIDMGWAGIKVGVDYEGDHHRTDRRTFNKDIKR  244
            RLLLI AGFPRP TQIPV D+YG   A +DMGW  + + V+Y+G  H+ DR  +  D KR
Sbjct  185  RLLLIDAGFPRPTTQIPVLDDYGDPFAHLDMGWERLMIAVEYDGKQHQIDRSRYVWDHKR  244

Query  245  AEALTELGWTDVRVTVEDTEGGIIWRVSAAWQRR  278
               L   GW  +RV  ED    I+ RV  AW +R
Sbjct  245  LTMLRRRGWLHIRVISEDRPYDILRRVREAWTQR  278


>gi|308231722|ref|ZP_07413558.2| hypothetical protein TMAG_03890 [Mycobacterium tuberculosis SUMu001]
 gi|308378818|ref|ZP_07483985.2| hypothetical protein TMJG_02752 [Mycobacterium tuberculosis SUMu010]
 gi|308379960|ref|ZP_07488222.2| hypothetical protein TMKG_01568 [Mycobacterium tuberculosis SUMu011]
 gi|308216248|gb|EFO75647.1| hypothetical protein TMAG_03890 [Mycobacterium tuberculosis SUMu001]
 gi|308359137|gb|EFP47988.1| hypothetical protein TMJG_02752 [Mycobacterium tuberculosis SUMu010]
 gi|308363052|gb|EFP51903.1| hypothetical protein TMKG_01568 [Mycobacterium tuberculosis SUMu011]
Length=286

 Score =  264 bits (674),  Expect = 1e-68, Method: Compositional matrix adjust.
 Identities = 133/277 (49%), Positives = 178/277 (65%), Gaps = 0/277 (0%)

Query  3    EPFLGSEAIASGALTRHRLRSAYATIHPDVYVSPGADLTAWSRAQAAWLWSRRRGVIAGQ  62
            +PF+GSEA+A+G ++ H L   Y  I P+VY+      +   R  AAWLWS R+GVIAG 
Sbjct  7    QPFIGSEALAAGLISWHELGKYYTAIMPNVYLDKRLKPSLRQRVIAAWLWSGRKGVIAGA  66

Query  63   SAAAMHGAKWVDARQAAELLYDHRRPPAGIHTWSDRVADDEIQPISGMNTTTPARTALDL  122
            SA+A+HGAKWVD     EL++ + R P G+ T  + + D E+Q + G+  TT  RTA DL
Sbjct  67   SASALHGAKWVDDHALVELIWSNARAPNGVRTKDELLLDGEVQRLCGLTVTTVERTAFDL  126

Query  123  ARRYPVGKAVAAIDALARATDLKLADVEMLAERYRGSRGIRNARIALDLVDPGAESPRET  182
             RR P+G+A+  +DALA ATD K+ DV  LA ++  +RG+R    ALDLVDPGA+SP+ET
Sbjct  127  GRRPPLGQAITRLDALANATDFKINDVRELARKHPHTRGLRQLDKALDLVDPGAQSPKET  186

Query  183  WLRLLLIRAGFPRPQTQIPVYDEYGQLVAVIDMGWAGIKVGVDYEGDHHRTDRRTFNKDI  242
            WLRLLLI AGFPRP TQIP+   YG     +DMGW  I + V+Y+G+ HR  R  F KD+
Sbjct  187  WLRLLLINAGFPRPSTQIPLLGVYGHPKYFLDMGWEDIMLAVEYDGEQHRLSRDQFVKDV  246

Query  243  KRAEALTELGWTDVRVTVEDTEGGIIWRVSAAWQRRT  279
            +R E +   GWT +RV  +     ++ RV  AW   T
Sbjct  247  ERLEYIRRAGWTHIRVLADHKGPDVVRRVRQAWDTLT  283


>gi|15840508|ref|NP_335545.1| hypothetical protein MT1103 [Mycobacterium tuberculosis CDC1551]
 gi|254231360|ref|ZP_04924687.1| conserved hypothetical protein [Mycobacterium tuberculosis C]
 gi|254363984|ref|ZP_04980030.1| conserved hypothetical protein [Mycobacterium tuberculosis str. 
Haarlem]
 22 more sequence titles
 gi|308370073|ref|ZP_07420201.2| hypothetical protein TMBG_01537 [Mycobacterium tuberculosis SUMu002]
 gi|308371851|ref|ZP_07426458.2| hypothetical protein TMDG_03893 [Mycobacterium tuberculosis SUMu004]
 gi|308373023|ref|ZP_07430771.2| hypothetical protein TMEG_00965 [Mycobacterium tuberculosis SUMu005]
 gi|308374192|ref|ZP_07435167.2| hypothetical protein TMFG_02895 [Mycobacterium tuberculosis SUMu006]
 gi|308375347|ref|ZP_07443603.2| hypothetical protein TMGG_03153 [Mycobacterium tuberculosis SUMu007]
 gi|308376609|ref|ZP_07439421.2| hypothetical protein TMHG_00250 [Mycobacterium tuberculosis SUMu008]
 gi|308377608|ref|ZP_07479797.2| hypothetical protein TMIG_03820 [Mycobacterium tuberculosis SUMu009]
 gi|308398515|ref|ZP_07492728.2| hypothetical protein TMLG_03949 [Mycobacterium tuberculosis SUMu012]
 gi|13880683|gb|AAK45359.1| conserved hypothetical protein [Mycobacterium tuberculosis CDC1551]
 gi|124600419|gb|EAY59429.1| conserved hypothetical protein [Mycobacterium tuberculosis C]
 gi|134149498|gb|EBA41543.1| conserved hypothetical protein [Mycobacterium tuberculosis str. 
Haarlem]
 gi|308325411|gb|EFP14262.1| hypothetical protein TMBG_01537 [Mycobacterium tuberculosis SUMu002]
 gi|308335249|gb|EFP24100.1| hypothetical protein TMDG_03893 [Mycobacterium tuberculosis SUMu004]
 gi|308339055|gb|EFP27906.1| hypothetical protein TMEG_00965 [Mycobacterium tuberculosis SUMu005]
 gi|308342733|gb|EFP31584.1| hypothetical protein TMFG_02895 [Mycobacterium tuberculosis SUMu006]
 gi|308346608|gb|EFP35459.1| hypothetical protein TMGG_03153 [Mycobacterium tuberculosis SUMu007]
 gi|308350533|gb|EFP39384.1| hypothetical protein TMHG_00250 [Mycobacterium tuberculosis SUMu008]
 gi|308355181|gb|EFP44032.1| hypothetical protein TMIG_03820 [Mycobacterium tuberculosis SUMu009]
 gi|308366705|gb|EFP55556.1| hypothetical protein TMLG_03949 [Mycobacterium tuberculosis SUMu012]
 gi|323720464|gb|EGB29550.1| hypothetical protein TMMG_03073 [Mycobacterium tuberculosis CDC1551A]
 gi|339294070|gb|AEJ46181.1| hypothetical protein CCDC5079_0991 [Mycobacterium tuberculosis 
CCDC5079]
 gi|339297710|gb|AEJ49820.1| hypothetical protein CCDC5180_0983 [Mycobacterium tuberculosis 
CCDC5180]
Length=286

 Score =  263 bits (672),  Expect = 2e-68, Method: Compositional matrix adjust.
 Identities = 133/277 (49%), Positives = 178/277 (65%), Gaps = 0/277 (0%)

Query  3    EPFLGSEAIASGALTRHRLRSAYATIHPDVYVSPGADLTAWSRAQAAWLWSRRRGVIAGQ  62
            +PF+GSEA+A+G ++ H L   Y  I P+VY+      +   R  AAWLWS R+GVIAG 
Sbjct  7    QPFIGSEALAAGLISWHELGKYYTAIMPNVYLDKRLKPSLRQRVIAAWLWSGRKGVIAGA  66

Query  63   SAAAMHGAKWVDARQAAELLYDHRRPPAGIHTWSDRVADDEIQPISGMNTTTPARTALDL  122
            SA+A+HGAKWVD     EL++ + R P G+ T  + + D E+Q + G+  TT  RTA DL
Sbjct  67   SASALHGAKWVDDHALVELIWRNARAPNGVRTKDELLLDGEVQRLCGLTVTTVERTAFDL  126

Query  123  ARRYPVGKAVAAIDALARATDLKLADVEMLAERYRGSRGIRNARIALDLVDPGAESPRET  182
             RR P+G+A+  +DALA ATD K+ DV  LA ++  +RG+R    ALDLVDPGA+SP+ET
Sbjct  127  GRRPPLGQAITRLDALANATDFKINDVRELARKHPHTRGLRQLDKALDLVDPGAQSPKET  186

Query  183  WLRLLLIRAGFPRPQTQIPVYDEYGQLVAVIDMGWAGIKVGVDYEGDHHRTDRRTFNKDI  242
            WLRLLLI AGFPRP TQIP+   YG     +DMGW  I + V+Y+G+ HR  R  F KD+
Sbjct  187  WLRLLLINAGFPRPSTQIPLLGVYGHPKYFLDMGWEDIMLAVEYDGEQHRLSRDQFVKDV  246

Query  243  KRAEALTELGWTDVRVTVEDTEGGIIWRVSAAWQRRT  279
            +R E +   GWT +RV  +     ++ RV  AW   T
Sbjct  247  ERLEYIRRAGWTHIRVLADHKGPDVVRRVRQAWDTLT  283


>gi|15608213|ref|NP_215589.1| hypothetical protein Rv1073 [Mycobacterium tuberculosis H37Rv]
 gi|31792264|ref|NP_854757.1| hypothetical protein Mb1102 [Mycobacterium bovis AF2122/97]
 gi|121637002|ref|YP_977225.1| hypothetical protein BCG_1131 [Mycobacterium bovis BCG str. Pasteur 
1173P2]
 34 more sequence titles
 gi|148660858|ref|YP_001282381.1| hypothetical protein MRA_1083 [Mycobacterium tuberculosis H37Ra]
 gi|148822282|ref|YP_001287036.1| hypothetical protein TBFG_11091 [Mycobacterium tuberculosis F11]
 gi|167967367|ref|ZP_02549644.1| hypothetical protein MtubH3_04737 [Mycobacterium tuberculosis 
H37Ra]
 gi|224989475|ref|YP_002644162.1| hypothetical protein JTY_1104 [Mycobacterium bovis BCG str. Tokyo 
172]
 gi|254550064|ref|ZP_05140511.1| hypothetical protein Mtube_06339 [Mycobacterium tuberculosis 
'98-R604 INH-RIF-EM']
 gi|289442500|ref|ZP_06432244.1| conserved hypothetical protein [Mycobacterium tuberculosis T46]
 gi|289446659|ref|ZP_06436403.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A]
 gi|289569061|ref|ZP_06449288.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
 gi|289573716|ref|ZP_06453943.1| conserved hypothetical protein [Mycobacterium tuberculosis K85]
 gi|289749605|ref|ZP_06508983.1| conserved hypothetical protein [Mycobacterium tuberculosis T92]
 gi|289753136|ref|ZP_06512514.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
 gi|289757158|ref|ZP_06516536.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
 gi|289761211|ref|ZP_06520589.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 
1503]
 gi|298524571|ref|ZP_07011980.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A]
 gi|339631137|ref|YP_004722779.1| hypothetical protein MAF_10860 [Mycobacterium africanum GM041182]
 gi|2896710|emb|CAA17189.1| CONSERVED HYPOTHETICAL PROTEIN [Mycobacterium tuberculosis H37Rv]
 gi|31617852|emb|CAD93962.1| CONSERVED HYPOTHETICAL PROTEIN [Mycobacterium bovis AF2122/97]
 gi|121492649|emb|CAL71118.1| Conserved hypothetical protein [Mycobacterium bovis BCG str. 
Pasteur 1173P2]
 gi|148505010|gb|ABQ72819.1| hypothetical protein MRA_1083 [Mycobacterium tuberculosis H37Ra]
 gi|148720809|gb|ABR05434.1| conserved hypothetical protein [Mycobacterium tuberculosis F11]
 gi|224772588|dbj|BAH25394.1| hypothetical protein JTY_1104 [Mycobacterium bovis BCG str. Tokyo 
172]
 gi|289415419|gb|EFD12659.1| conserved hypothetical protein [Mycobacterium tuberculosis T46]
 gi|289419617|gb|EFD16818.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A]
 gi|289538147|gb|EFD42725.1| conserved hypothetical protein [Mycobacterium tuberculosis K85]
 gi|289542815|gb|EFD46463.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
 gi|289690192|gb|EFD57621.1| conserved hypothetical protein [Mycobacterium tuberculosis T92]
 gi|289693723|gb|EFD61152.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
 gi|289708717|gb|EFD72733.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 
1503]
 gi|289712722|gb|EFD76734.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
 gi|298494365|gb|EFI29659.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A]
 gi|326904702|gb|EGE51635.1| hypothetical protein TBPG_02613 [Mycobacterium tuberculosis W-148]
 gi|339330493|emb|CCC26158.1| conserved hypothetical protein [Mycobacterium africanum GM041182]
 gi|341601018|emb|CCC63690.1| conserved hypothetical protein [Mycobacterium bovis BCG str. 
Moreau RDJ]
 gi|344218900|gb|AEM99530.1| hypothetical protein MTCTRI2_1101 [Mycobacterium tuberculosis 
CTRI-2]
Length=283

 Score =  263 bits (672),  Expect = 2e-68, Method: Compositional matrix adjust.
 Identities = 133/277 (49%), Positives = 178/277 (65%), Gaps = 0/277 (0%)

Query  3    EPFLGSEAIASGALTRHRLRSAYATIHPDVYVSPGADLTAWSRAQAAWLWSRRRGVIAGQ  62
            +PF+GSEA+A+G ++ H L   Y  I P+VY+      +   R  AAWLWS R+GVIAG 
Sbjct  4    QPFIGSEALAAGLISWHELGKYYTAIMPNVYLDKRLKPSLRQRVIAAWLWSGRKGVIAGA  63

Query  63   SAAAMHGAKWVDARQAAELLYDHRRPPAGIHTWSDRVADDEIQPISGMNTTTPARTALDL  122
            SA+A+HGAKWVD     EL++ + R P G+ T  + + D E+Q + G+  TT  RTA DL
Sbjct  64   SASALHGAKWVDDHALVELIWRNARAPNGVRTKDELLLDGEVQRLCGLTVTTVERTAFDL  123

Query  123  ARRYPVGKAVAAIDALARATDLKLADVEMLAERYRGSRGIRNARIALDLVDPGAESPRET  182
             RR P+G+A+  +DALA ATD K+ DV  LA ++  +RG+R    ALDLVDPGA+SP+ET
Sbjct  124  GRRPPLGQAITRLDALANATDFKINDVRELARKHPHTRGLRQLDKALDLVDPGAQSPKET  183

Query  183  WLRLLLIRAGFPRPQTQIPVYDEYGQLVAVIDMGWAGIKVGVDYEGDHHRTDRRTFNKDI  242
            WLRLLLI AGFPRP TQIP+   YG     +DMGW  I + V+Y+G+ HR  R  F KD+
Sbjct  184  WLRLLLINAGFPRPSTQIPLLGVYGHPKYFLDMGWEDIMLAVEYDGEQHRLSRDQFVKDV  243

Query  243  KRAEALTELGWTDVRVTVEDTEGGIIWRVSAAWQRRT  279
            +R E +   GWT +RV  +     ++ RV  AW   T
Sbjct  244  ERLEYIRRAGWTHIRVLADHKGPDVVRRVRQAWDTLT  280


>gi|289744813|ref|ZP_06504191.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
 gi|289685341|gb|EFD52829.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
Length=283

 Score =  263 bits (671),  Expect = 3e-68, Method: Compositional matrix adjust.
 Identities = 133/277 (49%), Positives = 178/277 (65%), Gaps = 0/277 (0%)

Query  3    EPFLGSEAIASGALTRHRLRSAYATIHPDVYVSPGADLTAWSRAQAAWLWSRRRGVIAGQ  62
            +PF+GSEA+A+G ++ H L   Y  I P+VY+      +   R  AAWLWS R+GVIAG 
Sbjct  4    QPFIGSEALAAGLISWHELGKYYTAIMPNVYLDKRLKPSLRQRVIAAWLWSGRKGVIAGA  63

Query  63   SAAAMHGAKWVDARQAAELLYDHRRPPAGIHTWSDRVADDEIQPISGMNTTTPARTALDL  122
            SA+A+HGAKWVD     EL++ + R P G+ T  + + D E+Q + G+  TT  RTA DL
Sbjct  64   SASALHGAKWVDDHALVELIWRNARAPNGVRTKDELLLDGEVQRLCGLTLTTVERTAFDL  123

Query  123  ARRYPVGKAVAAIDALARATDLKLADVEMLAERYRGSRGIRNARIALDLVDPGAESPRET  182
             RR P+G+A+  +DALA ATD K+ DV  LA ++  +RG+R    ALDLVDPGA+SP+ET
Sbjct  124  GRRPPLGQAITRLDALANATDFKINDVRELARKHPHTRGLRQLDKALDLVDPGAQSPKET  183

Query  183  WLRLLLIRAGFPRPQTQIPVYDEYGQLVAVIDMGWAGIKVGVDYEGDHHRTDRRTFNKDI  242
            WLRLLLI AGFPRP TQIP+   YG     +DMGW  I + V+Y+G+ HR  R  F KD+
Sbjct  184  WLRLLLINAGFPRPSTQIPLLGVYGHPKYFLDMGWEDIMLAVEYDGEQHRLSRDQFVKDV  243

Query  243  KRAEALTELGWTDVRVTVEDTEGGIIWRVSAAWQRRT  279
            +R E +   GWT +RV  +     ++ RV  AW   T
Sbjct  244  ERLEYIRRAGWTHIRVLADHKGPDVVRRVRQAWDTLT  280


>gi|340626084|ref|YP_004744536.1| hypothetical protein MCAN_10791 [Mycobacterium canettii CIPT 
140010059]
 gi|340004274|emb|CCC43415.1| conserved hypothetical protein [Mycobacterium canettii CIPT 140010059]
Length=283

 Score =  262 bits (670),  Expect = 4e-68, Method: Compositional matrix adjust.
 Identities = 133/277 (49%), Positives = 178/277 (65%), Gaps = 0/277 (0%)

Query  3    EPFLGSEAIASGALTRHRLRSAYATIHPDVYVSPGADLTAWSRAQAAWLWSRRRGVIAGQ  62
            +PF+GSEA+A+G ++ H L   Y  I P+VY+      +   R  AAWLWS R+GVIAG 
Sbjct  4    QPFIGSEALAAGLISWHELGKYYTAIMPNVYLDKRLKPSLRQRVIAAWLWSGRKGVIAGA  63

Query  63   SAAAMHGAKWVDARQAAELLYDHRRPPAGIHTWSDRVADDEIQPISGMNTTTPARTALDL  122
            SA+A+HGAKWVD     EL++ + R P G+ T  + + D E+Q + G+  TT  RTA DL
Sbjct  64   SASALHGAKWVDDHALVELIWRNARAPNGVRTKDELLLDGEVQRLCGLTVTTVERTAFDL  123

Query  123  ARRYPVGKAVAAIDALARATDLKLADVEMLAERYRGSRGIRNARIALDLVDPGAESPRET  182
             RR P+G+A+  +DALA ATD K+ DV  LA ++  +RG+R    ALDLVDPGA+SP+ET
Sbjct  124  GRRPPLGQAITRLDALANATDFKINDVRELARKHPHTRGLRQLDKALDLVDPGAQSPKET  183

Query  183  WLRLLLIRAGFPRPQTQIPVYDEYGQLVAVIDMGWAGIKVGVDYEGDHHRTDRRTFNKDI  242
            WLRLLLI AGFPRP TQIP+   YG     +DMGW  I + V+Y+G+ HR  R  F KD+
Sbjct  184  WLRLLLINAGFPRPSTQIPLLGVYGYPKYFLDMGWEDIMLAVEYDGEQHRLSRDQFVKDV  243

Query  243  KRAEALTELGWTDVRVTVEDTEGGIIWRVSAAWQRRT  279
            +R E +   GWT +RV  +     ++ RV  AW   T
Sbjct  244  ERLEYIRRAGWTHIRVLADHKGPDVVRRVRQAWDTLT  280


>gi|126437298|ref|YP_001072989.1| hypothetical protein Mjls_4733 [Mycobacterium sp. JLS]
 gi|126237098|gb|ABO00499.1| conserved hypothetical protein [Mycobacterium sp. JLS]
Length=284

 Score =  261 bits (666),  Expect = 1e-67, Method: Compositional matrix adjust.
 Identities = 145/276 (53%), Positives = 180/276 (66%), Gaps = 2/276 (0%)

Query  3    EPFLGSEAIASGALTRHRLRSAYATIHPDVYVSPGADLTAWSRAQAAWLWSRRRGVIAGQ  62
            EPF+G EAI  G LTR +LR+ Y  +HP VY   GA  T  +RA AAWLW+ R GVI+G+
Sbjct  3    EPFIGREAITRGKLTRGQLRARYVAVHPGVYFPKGARPTLAARASAAWLWTGRHGVISGR  62

Query  63   SAAAMHGAKWVDARQAAELLYDHRRPPAGIHTWSDRVADDEIQPISGMNTTTPARTALDL  122
            +AAA+HGAKWVDA    E++ +H R   G+    +RV DDE+  I  +  T+PARTA DL
Sbjct  63   AAAALHGAKWVDATTPIEIITEHGRRRDGVIVREERVGDDEVVVIGDLPVTSPARTAFDL  122

Query  123  ARRYPVGKAVAAIDALARATDLKLADVEMLAERYRGSRGIRNARIALDLVDPGAESPRET  182
            AR  P   AV  +DALA AT +  AD   LA RYRG+RG+R+A +ALDL+D GA SP+ET
Sbjct  123  ARHLPRDAAVVHLDALAAATGVSAADTAPLARRYRGARGVRSADVALDLMDAGAASPQET  182

Query  183  WLRLLLIRAGFPRPQTQIPVYDEYGQLVAVIDMGWAGIKVGVDYEGDHHRTDRRTFNKDI  242
             LRL LI  G PRP+TQI V D Y +  A IDMG+   KVG+DYEG HH T R  +  DI
Sbjct  183  RLRLTLIDGGLPRPRTQIRVTDGYSE--AFIDMGYDEPKVGLDYEGAHHATSRGQYVHDI  240

Query  243  KRAEALTELGWTDVRVTVEDTEGGIIWRVSAAWQRR  278
             RAE L   GW D+RV  E +   I+ RV  A+ RR
Sbjct  241  GRAELLDREGWIDLRVVAEHSRRFILHRVREAFARR  276


>gi|108801117|ref|YP_641314.1| hypothetical protein Mmcs_4153 [Mycobacterium sp. MCS]
 gi|119870258|ref|YP_940210.1| hypothetical protein Mkms_4228 [Mycobacterium sp. KMS]
 gi|108771536|gb|ABG10258.1| conserved hypothetical protein [Mycobacterium sp. MCS]
 gi|119696347|gb|ABL93420.1| conserved hypothetical protein [Mycobacterium sp. KMS]
Length=281

 Score =  259 bits (662),  Expect = 3e-67, Method: Compositional matrix adjust.
 Identities = 139/276 (51%), Positives = 181/276 (66%), Gaps = 0/276 (0%)

Query  4    PFLGSEAIASGALTRHRLRSAYATIHPDVYVSPGADLTAWSRAQAAWLWSRRRGVIAGQS  63
            PF+GSEA+A G LTR+ LR  +  I PDVYV   A+ +   R  +AWLW+RR GV+AG  
Sbjct  5    PFIGSEALADGRLTRYELRRYHRAIMPDVYVDRRAEPSLRQRTVSAWLWTRREGVVAGLP  64

Query  64   AAAMHGAKWVDARQAAELLYDHRRPPAGIHTWSDRVADDEIQPISGMNTTTPARTALDLA  123
            AAA+HGAKW+D     EL++ + R P G+ T +D + D E+  + G+  TT  RTA DL 
Sbjct  65   AAALHGAKWIDDDVPVELIWRNARTPPGVVTRADALLDGEVATLDGLPVTTADRTAFDLG  124

Query  124  RRYPVGKAVAAIDALARATDLKLADVEMLAERYRGSRGIRNARIALDLVDPGAESPRETW  183
            RR P+  AVA +DAL RATDL + D+E LA  +  +RG+R    ALDLVD GAESP+ETW
Sbjct  125  RRGPLTAAVARLDALIRATDLGVGDIEALAAGHPHTRGLRQLEKALDLVDVGAESPKETW  184

Query  184  LRLLLIRAGFPRPQTQIPVYDEYGQLVAVIDMGWAGIKVGVDYEGDHHRTDRRTFNKDIK  243
            LRLLLIR  FPRP+TQIPV    G     +DMGW  +++ V+Y+GDHHRT +  F  +I+
Sbjct  185  LRLLLIRHDFPRPRTQIPVPAPDGHTTYYLDMGWEDLELAVEYDGDHHRTTKDRFAYEIQ  244

Query  244  RAEALTELGWTDVRVTVEDTEGGIIWRVSAAWQRRT  279
            RAE +   GW  VRV     E  +I RV+ AW+ RT
Sbjct  245  RAEDIAAAGWHVVRVAARSREADVIRRVTRAWRLRT  280


>gi|126437219|ref|YP_001072910.1| hypothetical protein Mjls_4654 [Mycobacterium sp. JLS]
 gi|126237019|gb|ABO00420.1| conserved hypothetical protein [Mycobacterium sp. JLS]
Length=289

 Score =  259 bits (661),  Expect = 4e-67, Method: Compositional matrix adjust.
 Identities = 137/274 (50%), Positives = 178/274 (65%), Gaps = 0/274 (0%)

Query  5    FLGSEAIASGALTRHRLRSAYATIHPDVYVSPGADLTAWSRAQAAWLWSRRRGVIAGQSA  64
             LGSEAI  G ++R  LRSAY  I PDVY+   A+ + ++    AWLWS+RR VI G++A
Sbjct  5    ILGSEAIDRGEVSRQGLRSAYRAIFPDVYMPKVAEPSLYANTVGAWLWSKRRAVITGKAA  64

Query  65   AAMHGAKWVDARQAAELLYDHRRPPAGIHTWSDRVADDEIQPISGMNTTTPARTALDLAR  124
            AA+HGA+WVD     EL++ + RPP GI T +DR   +E+  I G+   +  RTA DL R
Sbjct  65   AALHGAEWVDDDSPVELIWQNNRPPHGIVTRNDRFTCEEVVEIYGLAVASIQRTAFDLGR  124

Query  125  RYPVGKAVAAIDALARATDLKLADVEMLAERYRGSRGIRNARIALDLVDPGAESPRETWL  184
              P G+AVA +DALARAT L +  V  L E+YRG+RG++  R AL L+D GA+SP+ETWL
Sbjct  125  FLPRGEAVAHLDALARATGLAVEHVLPLVEQYRGARGVQRCREALRLMDAGAQSPKETWL  184

Query  185  RLLLIRAGFPRPQTQIPVYDEYGQLVAVIDMGWAGIKVGVDYEGDHHRTDRRTFNKDIKR  244
            RLLLI AGFPRP TQIPV D+YG   A +DMGW  + + V+Y+G  H+ DR  +  D KR
Sbjct  185  RLLLIDAGFPRPTTQIPVLDDYGDPFAHLDMGWERLMIAVEYDGKEHQNDRSRYVWDHKR  244

Query  245  AEALTELGWTDVRVTVEDTEGGIIWRVSAAWQRR  278
               L   GW  +RV  ED    I+ RV  AW +R
Sbjct  245  LTMLRRRGWLHIRVINEDRPYEILRRVREAWTQR  278


>gi|336458035|gb|EGO37022.1| hypothetical protein MAPs_17330 [Mycobacterium avium subsp. paratuberculosis 
S397]
Length=237

 Score =  259 bits (661),  Expect = 4e-67, Method: Compositional matrix adjust.
 Identities = 133/224 (60%), Positives = 165/224 (74%), Gaps = 0/224 (0%)

Query  45   RAQAAWLWSRRRGVIAGQSAAAMHGAKWVDARQAAELLYDHRRPPAGIHTWSDRVADDEI  104
            RA+AAWL SRRRGV+AG SAAA+HG+KW+D  + AE++  +RR   G+  W +R+  DEI
Sbjct  3    RAKAAWLRSRRRGVLAGFSAAALHGSKWIDTARPAEIIDTNRRHARGVRVWEERIESDEI  62

Query  105  QPISGMNTTTPARTALDLARRYPVGKAVAAIDALARATDLKLADVEMLAERYRGSRGIRN  164
              ++GM  TTPARTALDLARR+P G AVAAIDAL +AT+LK+ADVE+L +RYRG   I+ 
Sbjct  63   TVVAGMAVTTPARTALDLARRHPRGVAVAAIDALVQATELKMADVELLVDRYRGRHDIKA  122

Query  165  ARIALDLVDPGAESPRETWLRLLLIRAGFPRPQTQIPVYDEYGQLVAVIDMGWAGIKVGV  224
            AR AL LVD GA+SP+E+WLR+LLI AGFPRPQTQIPV +E+G   A +DMGW  IKV  
Sbjct  123  ARAALALVDGGAQSPKESWLRVLLIDAGFPRPQTQIPVRNEWGWAEAYLDMGWEEIKVAA  182

Query  225  DYEGDHHRTDRRTFNKDIKRAEALTELGWTDVRVTVEDTEGGII  268
            +Y+GD HR  R  + KDI+R E L   GW  VRV  ED    II
Sbjct  183  EYDGDQHRASRYQYVKDIRRLETLERYGWIVVRVIAEDRPDEII  226



Lambda     K      H
   0.320    0.134    0.416 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 439663874064


  Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
    Posted date:  Sep 5, 2011  4:36 AM
  Number of letters in database: 5,219,829,388
  Number of sequences in database:  15,229,318



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40