BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv3519
Length=236
Score E
Sequences producing significant alignments: (Bits) Value
gi|15610655|ref|NP_218036.1| hypothetical protein Rv3519 [Mycoba... 484 4e-135
gi|254234098|ref|ZP_04927422.1| hypothetical protein TBCG_03449 ... 484 5e-135
gi|183984972|ref|YP_001853263.1| hypothetical protein MMAR_5004 ... 425 2e-117
gi|118619266|ref|YP_907598.1| hypothetical protein MUL_4078 [Myc... 422 2e-116
gi|240172351|ref|ZP_04751010.1| hypothetical protein MkanA1_2375... 417 8e-115
gi|126437578|ref|YP_001073269.1| hypothetical protein Mjls_5014 ... 363 1e-98
gi|108801595|ref|YP_641792.1| hypothetical protein Mmcs_4632 [My... 360 1e-97
gi|254822603|ref|ZP_05227604.1| hypothetical protein MintA_21919... 345 3e-93
gi|41406644|ref|NP_959480.1| hypothetical protein MAP0546c [Myco... 342 4e-92
gi|254773597|ref|ZP_05215113.1| hypothetical protein MaviaA2_028... 340 1e-91
gi|342862253|ref|ZP_08718895.1| hypothetical protein MCOL_25306 ... 338 3e-91
gi|289759675|ref|ZP_06519053.1| conserved hypothetical protein [... 338 5e-91
gi|296166549|ref|ZP_06848980.1| conserved hypothetical protein [... 332 2e-89
gi|118462851|ref|YP_879920.1| hypothetical protein MAV_0640 [Myc... 323 2e-86
gi|118470481|ref|YP_890145.1| hypothetical protein MSMEG_5919 [M... 318 3e-85
gi|120406166|ref|YP_955995.1| hypothetical protein Mvan_5218 [My... 303 1e-80
gi|315442571|ref|YP_004075450.1| acetoacetate decarboxylase (ADC... 298 6e-79
gi|145222132|ref|YP_001132810.1| hypothetical protein Mflv_1540 ... 296 1e-78
gi|333992293|ref|YP_004524907.1| hypothetical protein JDM601_365... 284 6e-75
gi|226363941|ref|YP_002781723.1| hypothetical protein ROP_45310 ... 216 1e-54
gi|111021558|ref|YP_704530.1| acetoacetate decarboxylase [Rhodoc... 216 2e-54
gi|325674943|ref|ZP_08154630.1| acetoacetate decarboxylase [Rhod... 215 5e-54
gi|312138152|ref|YP_004005488.1| hypothetical protein REQ_06860 ... 208 6e-52
gi|269128299|ref|YP_003301669.1| hypothetical protein Tcur_4103 ... 205 5e-51
gi|226304254|ref|YP_002764212.1| hypothetical protein RER_07650 ... 201 9e-50
gi|271962902|ref|YP_003337098.1| hypothetical protein Sros_1360 ... 198 4e-49
gi|54026109|ref|YP_120351.1| hypothetical protein nfa41380 [Noca... 195 4e-48
gi|343927752|ref|ZP_08767220.1| hypothetical protein GOALK_097_0... 177 8e-43
gi|296270576|ref|YP_003653208.1| hypothetical protein Tbis_2613 ... 171 8e-41
gi|326383180|ref|ZP_08204868.1| hypothetical protein SCNU_09599 ... 170 1e-40
gi|262203594|ref|YP_003274802.1| hypothetical protein Gbro_3725 ... 168 7e-40
gi|323717789|gb|EGB26986.1| hypothetical protein TMMG_00005 [Myc... 105 6e-21
gi|15843129|ref|NP_338166.1| hypothetical protein MT3620 [Mycoba... 90.1 2e-16
gi|331694425|ref|YP_004330664.1| acetoacetate decarboxylase [Pse... 90.1 2e-16
gi|288916350|ref|ZP_06410729.1| hypothetical protein FrEUN1fDRAF... 82.4 5e-14
gi|296165657|ref|ZP_06848178.1| conserved hypothetical protein [... 72.4 5e-11
gi|108763161|ref|YP_633096.1| hypothetical protein MXAN_4940 [My... 66.6 3e-09
gi|319950328|ref|ZP_08024247.1| hypothetical protein ES5_12160 [... 65.1 7e-09
gi|257053591|ref|YP_003131424.1| Acetoacetate decarboxylase [Hal... 59.3 4e-07
gi|343087021|ref|YP_004776316.1| hypothetical protein Cycma_4383... 57.4 2e-06
gi|171058551|ref|YP_001790900.1| hypothetical protein Lcho_1868 ... 57.0 2e-06
gi|335433572|ref|ZP_08558392.1| Acetoacetate decarboxylase [Halo... 57.0 2e-06
gi|186682617|ref|YP_001865813.1| hypothetical protein Npun_F2282... 56.6 3e-06
gi|167590414|ref|ZP_02382802.1| hypothetical protein BuboB_34072... 55.5 7e-06
gi|344210374|ref|YP_004794694.1| putative acetoacetate decarboxy... 54.3 1e-05
gi|343928529|ref|ZP_08767976.1| hypothetical protein GOALK_118_0... 53.5 3e-05
gi|83643854|ref|YP_432289.1| hypothetical protein HCH_00977 [Hah... 53.1 3e-05
gi|115372588|ref|ZP_01459895.1| conserved hypothetical protein [... 52.8 4e-05
gi|332669810|ref|YP_004452818.1| hypothetical protein Celf_1296 ... 52.8 5e-05
gi|304310458|ref|YP_003810056.1| hypothetical protein HDN1F_0814... 51.6 8e-05
>gi|15610655|ref|NP_218036.1| hypothetical protein Rv3519 [Mycobacterium tuberculosis H37Rv]
gi|31794695|ref|NP_857188.1| hypothetical protein Mb3549 [Mycobacterium bovis AF2122/97]
gi|121639438|ref|YP_979662.1| hypothetical protein BCG_3583 [Mycobacterium bovis BCG str. Pasteur
1173P2]
69 more sequence titles
Length=236
Score = 484 bits (1246), Expect = 4e-135, Method: Compositional matrix adjust.
Identities = 236/236 (100%), Positives = 236/236 (100%), Gaps = 0/236 (0%)
Query 1 MPVSQHTIAGTVLTMPVRIRTANLHSAMFSVPADPAQRLIDYSGLRVCEYLPGKAIVMQM 60
MPVSQHTIAGTVLTMPVRIRTANLHSAMFSVPADPAQRLIDYSGLRVCEYLPGKAIVMQM
Sbjct 1 MPVSQHTIAGTVLTMPVRIRTANLHSAMFSVPADPAQRLIDYSGLRVCEYLPGKAIVMQM 60
Query 61 LVRYVDGDLGRYHEYGTAIMVNPPGTQRRGPRALTRAAAFIHHLPVDQVFTLEAGRTIWG 120
LVRYVDGDLGRYHEYGTAIMVNPPGTQRRGPRALTRAAAFIHHLPVDQVFTLEAGRTIWG
Sbjct 61 LVRYVDGDLGRYHEYGTAIMVNPPGTQRRGPRALTRAAAFIHHLPVDQVFTLEAGRTIWG 120
Query 121 FPKIMADFNVTDGRRFGFDVSADGRLIAGIEFSTGLPVPTLGWQMLKTYSHHDGVTREIP 180
FPKIMADFNVTDGRRFGFDVSADGRLIAGIEFSTGLPVPTLGWQMLKTYSHHDGVTREIP
Sbjct 121 FPKIMADFNVTDGRRFGFDVSADGRLIAGIEFSTGLPVPTLGWQMLKTYSHHDGVTREIP 180
Query 181 WEMKVSGLRARLGGARLRLGDHPYAKELASLGLPKRALLSQSAANVEMTFGDGHPI 236
WEMKVSGLRARLGGARLRLGDHPYAKELASLGLPKRALLSQSAANVEMTFGDGHPI
Sbjct 181 WEMKVSGLRARLGGARLRLGDHPYAKELASLGLPKRALLSQSAANVEMTFGDGHPI 236
>gi|254234098|ref|ZP_04927422.1| hypothetical protein TBCG_03449 [Mycobacterium tuberculosis C]
gi|308371377|ref|ZP_07424745.2| hypothetical protein TMCG_03642 [Mycobacterium tuberculosis SUMu003]
gi|124603766|gb|EAY61729.1| hypothetical protein TBCG_03449 [Mycobacterium tuberculosis C]
gi|308328914|gb|EFP17765.1| hypothetical protein TMCG_03642 [Mycobacterium tuberculosis SUMu003]
gi|339296338|gb|AEJ48449.1| hypothetical protein CCDC5079_3260 [Mycobacterium tuberculosis
CCDC5079]
gi|339299939|gb|AEJ52049.1| hypothetical protein CCDC5180_3212 [Mycobacterium tuberculosis
CCDC5180]
Length=239
Score = 484 bits (1246), Expect = 5e-135, Method: Compositional matrix adjust.
Identities = 236/236 (100%), Positives = 236/236 (100%), Gaps = 0/236 (0%)
Query 1 MPVSQHTIAGTVLTMPVRIRTANLHSAMFSVPADPAQRLIDYSGLRVCEYLPGKAIVMQM 60
MPVSQHTIAGTVLTMPVRIRTANLHSAMFSVPADPAQRLIDYSGLRVCEYLPGKAIVMQM
Sbjct 4 MPVSQHTIAGTVLTMPVRIRTANLHSAMFSVPADPAQRLIDYSGLRVCEYLPGKAIVMQM 63
Query 61 LVRYVDGDLGRYHEYGTAIMVNPPGTQRRGPRALTRAAAFIHHLPVDQVFTLEAGRTIWG 120
LVRYVDGDLGRYHEYGTAIMVNPPGTQRRGPRALTRAAAFIHHLPVDQVFTLEAGRTIWG
Sbjct 64 LVRYVDGDLGRYHEYGTAIMVNPPGTQRRGPRALTRAAAFIHHLPVDQVFTLEAGRTIWG 123
Query 121 FPKIMADFNVTDGRRFGFDVSADGRLIAGIEFSTGLPVPTLGWQMLKTYSHHDGVTREIP 180
FPKIMADFNVTDGRRFGFDVSADGRLIAGIEFSTGLPVPTLGWQMLKTYSHHDGVTREIP
Sbjct 124 FPKIMADFNVTDGRRFGFDVSADGRLIAGIEFSTGLPVPTLGWQMLKTYSHHDGVTREIP 183
Query 181 WEMKVSGLRARLGGARLRLGDHPYAKELASLGLPKRALLSQSAANVEMTFGDGHPI 236
WEMKVSGLRARLGGARLRLGDHPYAKELASLGLPKRALLSQSAANVEMTFGDGHPI
Sbjct 184 WEMKVSGLRARLGGARLRLGDHPYAKELASLGLPKRALLSQSAANVEMTFGDGHPI 239
>gi|183984972|ref|YP_001853263.1| hypothetical protein MMAR_5004 [Mycobacterium marinum M]
gi|183178298|gb|ACC43408.1| conserved hypothetical protein [Mycobacterium marinum M]
Length=236
Score = 425 bits (1093), Expect = 2e-117, Method: Compositional matrix adjust.
Identities = 202/236 (86%), Positives = 219/236 (93%), Gaps = 0/236 (0%)
Query 1 MPVSQHTIAGTVLTMPVRIRTANLHSAMFSVPADPAQRLIDYSGLRVCEYLPGKAIVMQM 60
MPVSQHTIAGTVLTMPVRIRTANLHSAMFSVPA AQ+LIDYSGLRVCEYLPGKA+VMQM
Sbjct 1 MPVSQHTIAGTVLTMPVRIRTANLHSAMFSVPAVAAQQLIDYSGLRVCEYLPGKAMVMQM 60
Query 61 LVRYVDGDLGRYHEYGTAIMVNPPGTQRRGPRALTRAAAFIHHLPVDQVFTLEAGRTIWG 120
LVRYVDGDLGRYHEYGTA+MVNPPG Q RGPRAL +AAAFIHHLPVDQ FTLEAGRTIWG
Sbjct 61 LVRYVDGDLGRYHEYGTAVMVNPPGVQTRGPRALAKAAAFIHHLPVDQSFTLEAGRTIWG 120
Query 121 FPKIMADFNVTDGRRFGFDVSADGRLIAGIEFSTGLPVPTLGWQMLKTYSHHDGVTREIP 180
FPKIMADFNV +G++F FDVSADG+LIAGIEF G+ VPT G Q+L+TYSH DGVTREIP
Sbjct 121 FPKIMADFNVREGKKFSFDVSADGQLIAGIEFGNGVAVPTRGAQVLQTYSHQDGVTREIP 180
Query 181 WEMKVSGLRARLGGARLRLGDHPYAKELASLGLPKRALLSQSAANVEMTFGDGHPI 236
WEM+++G+RARLGGARL LGDHPYA+ELASLGLPKRAL+SQSAANVEMTFGD H I
Sbjct 181 WEMRITGMRARLGGARLHLGDHPYARELASLGLPKRALVSQSAANVEMTFGDAHAI 236
>gi|118619266|ref|YP_907598.1| hypothetical protein MUL_4078 [Mycobacterium ulcerans Agy99]
gi|118571376|gb|ABL06127.1| conserved hypothetical protein [Mycobacterium ulcerans Agy99]
Length=236
Score = 422 bits (1086), Expect = 2e-116, Method: Compositional matrix adjust.
Identities = 200/236 (85%), Positives = 218/236 (93%), Gaps = 0/236 (0%)
Query 1 MPVSQHTIAGTVLTMPVRIRTANLHSAMFSVPADPAQRLIDYSGLRVCEYLPGKAIVMQM 60
MPVSQH IAGTVLTMPVRIRTANLHSAMFSVPA AQ+LIDYSGLRVCEYLPGKA+VMQM
Sbjct 1 MPVSQHIIAGTVLTMPVRIRTANLHSAMFSVPAVAAQQLIDYSGLRVCEYLPGKAMVMQM 60
Query 61 LVRYVDGDLGRYHEYGTAIMVNPPGTQRRGPRALTRAAAFIHHLPVDQVFTLEAGRTIWG 120
LVRYVDGDLGRYHEYGTA+MVNPPG Q RGPRAL +AAAFIHHLPVDQ FTLEAGRTIWG
Sbjct 61 LVRYVDGDLGRYHEYGTAVMVNPPGVQTRGPRALAKAAAFIHHLPVDQSFTLEAGRTIWG 120
Query 121 FPKIMADFNVTDGRRFGFDVSADGRLIAGIEFSTGLPVPTLGWQMLKTYSHHDGVTREIP 180
FPKIMADFNV +G++F FDVSADG+LIAGIEFS G+ VPT G Q+L+TYSH DGVTREIP
Sbjct 121 FPKIMADFNVREGKKFSFDVSADGQLIAGIEFSNGVAVPTRGAQVLQTYSHQDGVTREIP 180
Query 181 WEMKVSGLRARLGGARLRLGDHPYAKELASLGLPKRALLSQSAANVEMTFGDGHPI 236
WEM+++G+RARLGGARL LG+HPYA+ELASLGLPKRAL+SQS ANVEMTFGD H I
Sbjct 181 WEMRITGMRARLGGARLHLGEHPYARELASLGLPKRALVSQSTANVEMTFGDAHAI 236
>gi|240172351|ref|ZP_04751010.1| hypothetical protein MkanA1_23753 [Mycobacterium kansasii ATCC
12478]
Length=239
Score = 417 bits (1071), Expect = 8e-115, Method: Compositional matrix adjust.
Identities = 203/239 (85%), Positives = 216/239 (91%), Gaps = 3/239 (1%)
Query 1 MPVSQHTIAGTVLTMPVRIRTANLHSAMFSVPADPAQRLIDYSGLRVCEYLPGKAIVMQM 60
M VSQHTIAGTVLTMPVRIR A++HSAMFSVPA P Q+LIDYSGL VCEYLPGKAIVMQM
Sbjct 1 MAVSQHTIAGTVLTMPVRIRKADMHSAMFSVPAAPTQKLIDYSGLSVCEYLPGKAIVMQM 60
Query 61 LVRYVDGDLGRYHEYGTAIMVNPPGTQRR---GPRALTRAAAFIHHLPVDQVFTLEAGRT 117
LVRYVDGDLG+YHEYGTA+MVNPPG+Q R GPRAL RAAAFIHHLPVDQ FTLEAGRT
Sbjct 61 LVRYVDGDLGQYHEYGTAVMVNPPGSQARRARGPRALGRAAAFIHHLPVDQSFTLEAGRT 120
Query 118 IWGFPKIMADFNVTDGRRFGFDVSADGRLIAGIEFSTGLPVPTLGWQMLKTYSHHDGVTR 177
IWGFPKIMADFNV +G +FGFDVSADG+LIAGIEF GL +PT G Q LKTYSH DGVTR
Sbjct 121 IWGFPKIMADFNVREGPKFGFDVSADGQLIAGIEFGNGLRLPTRGTQTLKTYSHQDGVTR 180
Query 178 EIPWEMKVSGLRARLGGARLRLGDHPYAKELASLGLPKRALLSQSAANVEMTFGDGHPI 236
EIPWEMK+SGLRARLGGAR+RLGDHPYAKELASLGLPKRAL SQSAANVEMTFGD H +
Sbjct 181 EIPWEMKISGLRARLGGARMRLGDHPYAKELASLGLPKRALASQSAANVEMTFGDAHAL 239
>gi|126437578|ref|YP_001073269.1| hypothetical protein Mjls_5014 [Mycobacterium sp. JLS]
gi|126237378|gb|ABO00779.1| conserved hypothetical protein [Mycobacterium sp. JLS]
Length=242
Score = 363 bits (931), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 176/237 (75%), Positives = 198/237 (84%), Gaps = 3/237 (1%)
Query 3 VSQHTIAGTVLTMPVRIRTANLHSAMFSVPADPAQRLIDYSGLRVCEYLPGKAIVMQMLV 62
VSQHTIAGTVLTMPVRIR AN H AMFSV A AQR+IDY+GLRVCEYLPG+A+VM MLV
Sbjct 5 VSQHTIAGTVLTMPVRIRKANTHVAMFSVAAPAAQRMIDYTGLRVCEYLPGRAVVMLMLV 64
Query 63 RYVDGDLGRYHEYGTAIMVNPPGTQRRGPRALTRAAAFIHHLPVDQVFTLEAGRTIWGFP 122
RYVDGDLG+YHE+GTA+MVNPPG+ +GP AL AAAFIHHLPVDQ FTLEAGR IWGFP
Sbjct 65 RYVDGDLGKYHEFGTAVMVNPPGSTAKGPGALASAAAFIHHLPVDQSFTLEAGRRIWGFP 124
Query 123 KIMADFNVTDGRRFGFDVSADGRLIAGIEFSTGLPVP---TLGWQMLKTYSHHDGVTREI 179
KIMADF V + RF F+VS +G IAGIEF+ G+P+P T Q+LKTYSH DGV REI
Sbjct 125 KIMADFTVRETPRFDFEVSENGTFIAGIEFARGVPIPSAVTARPQVLKTYSHTDGVLREI 184
Query 180 PWEMKVSGLRARLGGARLRLGDHPYAKELASLGLPKRALLSQSAANVEMTFGDGHPI 236
PWEM+ SG+ RLGGARLRLGDHPYA+ELA+LGLPKRA SQ++ANVEMTFGD I
Sbjct 185 PWEMRNSGMSVRLGGARLRLGDHPYARELAALGLPKRAFASQASANVEMTFGDAQEI 241
>gi|108801595|ref|YP_641792.1| hypothetical protein Mmcs_4632 [Mycobacterium sp. MCS]
gi|119870749|ref|YP_940701.1| hypothetical protein Mkms_4720 [Mycobacterium sp. KMS]
gi|108772014|gb|ABG10736.1| conserved hypothetical protein [Mycobacterium sp. MCS]
gi|119696838|gb|ABL93911.1| conserved hypothetical protein [Mycobacterium sp. KMS]
Length=242
Score = 360 bits (924), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 175/237 (74%), Positives = 197/237 (84%), Gaps = 3/237 (1%)
Query 3 VSQHTIAGTVLTMPVRIRTANLHSAMFSVPADPAQRLIDYSGLRVCEYLPGKAIVMQMLV 62
VSQHTIAGTVLTMPVRIR AN H AMFSV A AQR+IDY+GLRVCEYLPG+A+VM MLV
Sbjct 5 VSQHTIAGTVLTMPVRIRKANTHVAMFSVAAPAAQRMIDYTGLRVCEYLPGRAVVMLMLV 64
Query 63 RYVDGDLGRYHEYGTAIMVNPPGTQRRGPRALTRAAAFIHHLPVDQVFTLEAGRTIWGFP 122
RYVDGDLG+YHE+GTA+MVNPPG+ +GP AL AAAFIH LPVDQ FTLEAGR IWGFP
Sbjct 65 RYVDGDLGKYHEFGTAVMVNPPGSTAKGPGALASAAAFIHRLPVDQSFTLEAGRRIWGFP 124
Query 123 KIMADFNVTDGRRFGFDVSADGRLIAGIEFSTGLPVP---TLGWQMLKTYSHHDGVTREI 179
KIMADF V + RF F+VS +G IAGIEF+ G+P+P T Q+LKTYSH DGV REI
Sbjct 125 KIMADFTVRETPRFDFEVSENGTFIAGIEFARGVPIPSAVTARPQVLKTYSHTDGVLREI 184
Query 180 PWEMKVSGLRARLGGARLRLGDHPYAKELASLGLPKRALLSQSAANVEMTFGDGHPI 236
PWEM+ SG+ RLGGARLRLGDHPYA+ELA+LGLPKRA SQ++ANVEMTFGD I
Sbjct 185 PWEMRNSGMSVRLGGARLRLGDHPYARELAALGLPKRAFASQASANVEMTFGDAQEI 241
>gi|254822603|ref|ZP_05227604.1| hypothetical protein MintA_21919 [Mycobacterium intracellulare
ATCC 13950]
Length=240
Score = 345 bits (885), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 167/239 (70%), Positives = 197/239 (83%), Gaps = 3/239 (1%)
Query 1 MPVSQHTIAGTVLTMPVRIRTANLHSAMFSVPADPAQRLIDYSGLRVCEYLPGKAIVMQM 60
M SQH +AGTVLTMPVRIR A++H+AMFSV A AQRLIDYSGL+VC++ PG+A+V M
Sbjct 1 MAESQHIVAGTVLTMPVRIRKADVHTAMFSVDAQAAQRLIDYSGLKVCQHRPGRAVVNLM 60
Query 61 LVRYVDGDLGRYHEYGTAIMVNPPGTQRRGPRALTRAAAFIHHLPVDQVFTLEAGRTIWG 120
L RY+DGDLG+YHE+GT +MVNPPG+ G RAL AAAFIHHLPVDQ FTLEAGR+IWG
Sbjct 61 LARYIDGDLGQYHEFGTCVMVNPPGSTASGWRALGDAAAFIHHLPVDQSFTLEAGRSIWG 120
Query 121 FPKIMADFNVTDGRRFGFDVSADGRLIAGIEFSTGLPVPTLGW---QMLKTYSHHDGVTR 177
FPKIMADF V + RFGFDVSADG IAGI+F+ LPVP++ Q+LKTY++ DG TR
Sbjct 121 FPKIMADFTVREQGRFGFDVSADGAHIAGIDFARALPVPSVFTSRPQVLKTYTYADGTTR 180
Query 178 EIPWEMKVSGLRARLGGARLRLGDHPYAKELASLGLPKRALLSQSAANVEMTFGDGHPI 236
E+PWEM+V GLR +LGGA LRLGDH YAKELASLGLPKRA++S S +VEMTFGD HP+
Sbjct 181 EVPWEMRVRGLRGQLGGATLRLGDHAYAKELASLGLPKRAMISGSVGHVEMTFGDAHPL 239
>gi|41406644|ref|NP_959480.1| hypothetical protein MAP0546c [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|41394993|gb|AAS02863.1| hypothetical protein MAP_0546c [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|336458433|gb|EGO37407.1| Acetoacetate decarboxylase (ADC) [Mycobacterium avium subsp.
paratuberculosis S397]
Length=240
Score = 342 bits (876), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 167/239 (70%), Positives = 196/239 (83%), Gaps = 3/239 (1%)
Query 1 MPVSQHTIAGTVLTMPVRIRTANLHSAMFSVPADPAQRLIDYSGLRVCEYLPGKAIVMQM 60
M SQH +AGTVLTMPVRIR A++H+AMFSV A AQRLIDYSGL+VC++ PG+A+V M
Sbjct 1 MTESQHIVAGTVLTMPVRIRKADVHTAMFSVDAQAAQRLIDYSGLKVCQHRPGRAVVNLM 60
Query 61 LVRYVDGDLGRYHEYGTAIMVNPPGTQRRGPRALTRAAAFIHHLPVDQVFTLEAGRTIWG 120
L RY+DGDLG+YHE+GT +MVNPPG+ RG RAL AAAFIHHLPVDQ FTLEAGR+IWG
Sbjct 61 LARYIDGDLGQYHEFGTCVMVNPPGSTARGWRALGEAAAFIHHLPVDQSFTLEAGRSIWG 120
Query 121 FPKIMADFNVTDGRRFGFDVSADGRLIAGIEFSTGLPVPTLGW---QMLKTYSHHDGVTR 177
FPKIMADF V + RFGFDVSADG IAGI+F+ GLPVP+L Q+LKTY+ +G TR
Sbjct 121 FPKIMADFTVREQGRFGFDVSADGAHIAGIDFAPGLPVPSLFTSRPQVLKTYTFAEGTTR 180
Query 178 EIPWEMKVSGLRARLGGARLRLGDHPYAKELASLGLPKRALLSQSAANVEMTFGDGHPI 236
E+PWEM+V GLR R GGA LRLG HPYA+ELASLGLP RA++S S +VEMTFGD HP+
Sbjct 181 EVPWEMRVRGLRGRPGGATLRLGTHPYAQELASLGLPTRAMISGSVGHVEMTFGDAHPL 239
>gi|254773597|ref|ZP_05215113.1| hypothetical protein MaviaA2_02820 [Mycobacterium avium subsp.
avium ATCC 25291]
Length=240
Score = 340 bits (872), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 166/239 (70%), Positives = 195/239 (82%), Gaps = 3/239 (1%)
Query 1 MPVSQHTIAGTVLTMPVRIRTANLHSAMFSVPADPAQRLIDYSGLRVCEYLPGKAIVMQM 60
M SQH +AGTVLTMPVRIR A++H+AMFSV A AQRLIDYSGL+VC++ PG+A+V M
Sbjct 1 MTESQHIVAGTVLTMPVRIRKADVHTAMFSVDAQAAQRLIDYSGLKVCQHRPGRAVVNLM 60
Query 61 LVRYVDGDLGRYHEYGTAIMVNPPGTQRRGPRALTRAAAFIHHLPVDQVFTLEAGRTIWG 120
L RY+DGDLG+YHE+GT +MVNPPG+ RG RAL AAAFIHHLPVDQ FTLEAGR+IWG
Sbjct 61 LARYIDGDLGQYHEFGTCVMVNPPGSTARGWRALGEAAAFIHHLPVDQSFTLEAGRSIWG 120
Query 121 FPKIMADFNVTDGRRFGFDVSADGRLIAGIEFSTGLPVPTLGW---QMLKTYSHHDGVTR 177
FPKIMADF V + RFGFDVSADG IAGI+F+ GLPVP+L Q+LKTY+ +G TR
Sbjct 121 FPKIMADFTVREQGRFGFDVSADGAHIAGIDFAPGLPVPSLFTSRPQVLKTYTFAEGTTR 180
Query 178 EIPWEMKVSGLRARLGGARLRLGDHPYAKELASLGLPKRALLSQSAANVEMTFGDGHPI 236
E+PWEM+V GLR R GGA LRLG HPY +ELASLGLP RA++S S +VEMTFGD HP+
Sbjct 181 EVPWEMRVRGLRGRPGGATLRLGTHPYVQELASLGLPTRAMISGSVGHVEMTFGDAHPL 239
>gi|342862253|ref|ZP_08718895.1| hypothetical protein MCOL_25306 [Mycobacterium colombiense CECT
3035]
gi|342130331|gb|EGT83651.1| hypothetical protein MCOL_25306 [Mycobacterium colombiense CECT
3035]
Length=240
Score = 338 bits (868), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 166/239 (70%), Positives = 196/239 (83%), Gaps = 3/239 (1%)
Query 1 MPVSQHTIAGTVLTMPVRIRTANLHSAMFSVPADPAQRLIDYSGLRVCEYLPGKAIVMQM 60
MP SQH +AGTVLTMPVRIR A++H+AMFSV A AQRLIDYSGL+VC+ PG+A+V M
Sbjct 1 MPESQHVVAGTVLTMPVRIRKADVHTAMFSVDAQAAQRLIDYSGLQVCQPRPGRAVVNLM 60
Query 61 LVRYVDGDLGRYHEYGTAIMVNPPGTQRRGPRALTRAAAFIHHLPVDQVFTLEAGRTIWG 120
L RY+DGDLG+YHE+GT +MVNPPG+ RG RAL AAAFIHHLPVDQ FTLEAGR+IWG
Sbjct 61 LARYIDGDLGQYHEFGTCVMVNPPGSTARGWRALGDAAAFIHHLPVDQSFTLEAGRSIWG 120
Query 121 FPKIMADFNVTDGRRFGFDVSADGRLIAGIEFSTGLPVPTLGW---QMLKTYSHHDGVTR 177
FPKIMADF V + RFGFDVSADG IAGI+F+ G+PVP++ Q+LKTY+ +G TR
Sbjct 121 FPKIMADFTVREHGRFGFDVSADGAHIAGIDFARGVPVPSMFTSRPQVLKTYTFAEGTTR 180
Query 178 EIPWEMKVSGLRARLGGARLRLGDHPYAKELASLGLPKRALLSQSAANVEMTFGDGHPI 236
E+PWEM+V GLR R GGA LRLGDH YA+ELASLGLPKRA++S S +VEMTFGD P+
Sbjct 181 EVPWEMRVRGLRGRPGGATLRLGDHAYAEELASLGLPKRAMVSGSVGHVEMTFGDAQPL 239
>gi|289759675|ref|ZP_06519053.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
gi|289715239|gb|EFD79251.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
Length=175
Score = 338 bits (866), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 164/167 (99%), Positives = 166/167 (99%), Gaps = 0/167 (0%)
Query 1 MPVSQHTIAGTVLTMPVRIRTANLHSAMFSVPADPAQRLIDYSGLRVCEYLPGKAIVMQM 60
MPVSQHTIAGTVLTMPVRIRTANLHSAMFSVPADPAQRLIDYSGLRVCEYLPGKAIVMQM
Sbjct 4 MPVSQHTIAGTVLTMPVRIRTANLHSAMFSVPADPAQRLIDYSGLRVCEYLPGKAIVMQM 63
Query 61 LVRYVDGDLGRYHEYGTAIMVNPPGTQRRGPRALTRAAAFIHHLPVDQVFTLEAGRTIWG 120
LVRYVDGDLGRYHEYGTAIMVNPPGTQRRGPRALTRAAAFIHHLPVDQVFTLEAGRTIWG
Sbjct 64 LVRYVDGDLGRYHEYGTAIMVNPPGTQRRGPRALTRAAAFIHHLPVDQVFTLEAGRTIWG 123
Query 121 FPKIMADFNVTDGRRFGFDVSADGRLIAGIEFSTGLPVPTLGWQMLK 167
FPKIMADFNVTDGRRFGFDVSADGRLIAGIEFSTGLPVPTLGWQ ++
Sbjct 124 FPKIMADFNVTDGRRFGFDVSADGRLIAGIEFSTGLPVPTLGWQNVE 170
>gi|296166549|ref|ZP_06848980.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295898161|gb|EFG77736.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length=238
Score = 332 bits (851), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 158/237 (67%), Positives = 189/237 (80%), Gaps = 1/237 (0%)
Query 1 MPVSQHTIAGTVLTMPVRIRTANLHSAMFSVPADPAQRLIDYSGLRVCEYLPGKAIVMQM 60
M SQHTIAGTVLTMPV+IR AN H AMFSV AD AQ++IDYSGL+VC YLPG+AIV+ M
Sbjct 1 MTASQHTIAGTVLTMPVKIRKANQHMAMFSVDADAAQQMIDYSGLQVCRYLPGRAIVVLM 60
Query 61 LVRYVDGDLGRYHEYGTAIMVNPPGTQRRGPRALTRAAAFIHHLPVDQVFTLEAGRTIWG 120
L+ Y+DGDLGRYHE+GT++MVNPPG++ GPRAL A AFIHHLPVDQ FTLEAG IWG
Sbjct 61 LMHYLDGDLGRYHEFGTSVMVNPPGSRAGGPRALQSAGAFIHHLPVDQAFTLEAGTKIWG 120
Query 121 FPKIMADFNVTDGRRFGFDVSADGRLIAGIEFSTGLPVPTL-GWQMLKTYSHHDGVTREI 179
+PK+M DF V +GR FGFD+S DG+ + G++F GLP+ + Q ++YSH DG+TRE
Sbjct 121 YPKVMGDFTVAEGREFGFDLSIDGQHVIGMDFRPGLPIRLMPRQQAQRSYSHRDGITRET 180
Query 180 PWEMKVSGLRARLGGARLRLGDHPYAKELASLGLPKRALLSQSAANVEMTFGDGHPI 236
+E + G+R RLGG R+RLGDHPYAKELASLGLPKRALLS SA V+MTFGD I
Sbjct 181 AFEHTLDGVRTRLGGVRVRLGDHPYAKELASLGLPKRALLSSSADQVQMTFGDAQEI 237
>gi|118462851|ref|YP_879920.1| hypothetical protein MAV_0640 [Mycobacterium avium 104]
gi|118164138|gb|ABK65035.1| conserved hypothetical protein [Mycobacterium avium 104]
Length=226
Score = 323 bits (827), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 157/225 (70%), Positives = 185/225 (83%), Gaps = 3/225 (1%)
Query 15 MPVRIRTANLHSAMFSVPADPAQRLIDYSGLRVCEYLPGKAIVMQMLVRYVDGDLGRYHE 74
MPVRIR A++H+AMFSV A AQRLIDYSGL+VC++ PG+A+V ML RY+DGDLG+YHE
Sbjct 1 MPVRIRKADVHTAMFSVDAQAAQRLIDYSGLKVCQHRPGRAVVNLMLARYIDGDLGQYHE 60
Query 75 YGTAIMVNPPGTQRRGPRALTRAAAFIHHLPVDQVFTLEAGRTIWGFPKIMADFNVTDGR 134
+GT +MVNPPG+ RG RAL AAAFIHHLPVDQ FTLEAGR+IWGFPKIMADF V +
Sbjct 61 FGTCVMVNPPGSTARGWRALGEAAAFIHHLPVDQSFTLEAGRSIWGFPKIMADFTVREQG 120
Query 135 RFGFDVSADGRLIAGIEFSTGLPVPTLGW---QMLKTYSHHDGVTREIPWEMKVSGLRAR 191
RFGFDVSADG IAGI+F+ GLPVP+L Q+LKTY+ +G TRE+PWEM+V GLR R
Sbjct 121 RFGFDVSADGAHIAGIDFAPGLPVPSLFTSRPQVLKTYTFAEGTTREVPWEMRVRGLRGR 180
Query 192 LGGARLRLGDHPYAKELASLGLPKRALLSQSAANVEMTFGDGHPI 236
GGA LRLG HPYA+ELASLGLP RA++S S +VEMTFGD HP+
Sbjct 181 PGGATLRLGTHPYAQELASLGLPTRAMISGSVGHVEMTFGDAHPL 225
>gi|118470481|ref|YP_890145.1| hypothetical protein MSMEG_5919 [Mycobacterium smegmatis str.
MC2 155]
gi|118171768|gb|ABK72664.1| conserved hypothetical protein [Mycobacterium smegmatis str.
MC2 155]
Length=238
Score = 318 bits (816), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 157/237 (67%), Positives = 186/237 (79%), Gaps = 3/237 (1%)
Query 3 VSQHTIAGTVLTMPVRIRTANLHSAMFSVPADPAQRLIDYSGLRVCEYLPGKAIVMQMLV 62
++QHTIAG +TMPVRIRTA+ H AMFSV AD AQR+ID+SGL+VC Y PG+A+V+ ML+
Sbjct 1 MTQHTIAGNTVTMPVRIRTADQHMAMFSVDADAAQRMIDHSGLQVCRYRPGRAMVILMLM 60
Query 63 RYVDGDLGRYHEYGTAIMVNPPGTQRRGPRALTRAAAFIHHLPVDQVFTLEAGRTIWGFP 122
RYVDGDLG Y EYGT +MVNPPG+ G RAL A A+IHHLPVDQ FTLEAGRTIWG+P
Sbjct 61 RYVDGDLGEYLEYGTNVMVNPPGSTATGLRALQSAGAYIHHLPVDQSFTLEAGRTIWGYP 120
Query 123 KIMADFNVTDGRRFGFDVSADGRLIAGIEFSTGLPVP---TLGWQMLKTYSHHDGVTREI 179
K+MADF V + R+FGFDVS G+ G+EF G+PVP T Q+ TYSH DGVTR
Sbjct 121 KVMADFTVREARQFGFDVSIGGKFAVGMEFRPGIPVPPVFTSRPQVHPTYSHLDGVTRRT 180
Query 180 PWEMKVSGLRARLGGARLRLGDHPYAKELASLGLPKRALLSQSAANVEMTFGDGHPI 236
+M++SG+R R GG RLRLGDHPYA ELASLGLPKRAL+S SAANV+MTFG+ I
Sbjct 181 EGQMRLSGVRYRFGGVRLRLGDHPYAAELASLGLPKRALVSSSAANVQMTFGEAEVI 237
>gi|120406166|ref|YP_955995.1| hypothetical protein Mvan_5218 [Mycobacterium vanbaalenii PYR-1]
gi|119958984|gb|ABM15989.1| conserved hypothetical protein [Mycobacterium vanbaalenii PYR-1]
Length=246
Score = 303 bits (776), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 151/238 (64%), Positives = 182/238 (77%), Gaps = 5/238 (2%)
Query 4 SQHTIAGTVLTMPVRIRTANLHSAMFSVPADPAQRLIDYSGLRVCEYLPG--KAIVMQML 61
SQHTIAGTVLTMPVR+RTA+ H+AMF V AD AQR+IDYSGLRVC + G KA+V+ ML
Sbjct 6 SQHTIAGTVLTMPVRVRTAHQHTAMFVVDADAAQRMIDYSGLRVCRFGRGHRKAMVVLML 65
Query 62 VRYVDGDLGRYHEYGTAIMVNPPGTQRRGPRALTRAAAFIHHLPVDQVFTLEAGRTIWGF 121
+RY D DLG+Y+EYGT +MVNPPG+ G +AL A AF+HHLPVDQ FTLEAGRTIWG+
Sbjct 66 MRYEDTDLGQYYEYGTNVMVNPPGSNATGMKALQSAGAFVHHLPVDQSFTLEAGRTIWGY 125
Query 122 PKIMADFNVTDGRRFGFDVSADGRLIAGIEFSTGLPVPTLGW---QMLKTYSHHDGVTRE 178
PK+MADF + +GR FGFDVS DG ++F+ G+PVP Q+ TYSH DGVTRE
Sbjct 126 PKVMADFTIRNGRHFGFDVSIDGLHAVSMDFAPGIPVPAAFASKPQVHSTYSHLDGVTRE 185
Query 179 IPWEMKVSGLRARLGGARLRLGDHPYAKELASLGLPKRALLSQSAANVEMTFGDGHPI 236
M +SG+R R GG LRLG+HPYA EL++LGLPKRAL+S SAANV+MTF D +
Sbjct 186 TEGRMVLSGVRYRPGGVSLRLGEHPYAAELSALGLPKRALVSSSAANVDMTFADSRTV 243
>gi|315442571|ref|YP_004075450.1| acetoacetate decarboxylase (ADC) [Mycobacterium sp. Spyr1]
gi|315260874|gb|ADT97615.1| Acetoacetate decarboxylase (ADC) [Mycobacterium sp. Spyr1]
Length=244
Score = 298 bits (762), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 152/238 (64%), Positives = 183/238 (77%), Gaps = 8/238 (3%)
Query 3 VSQHTIAGTVLTMPVRIRTANLHSAMFSVPADPAQRLIDYSGLRVCEYLPG--KAIVMQM 60
++QHTIAGTVLTMPVR+R A+ H+AMF V A AQR+IDYSGLRVC + G +A+ + M
Sbjct 1 MTQHTIAGTVLTMPVRVRRAHQHTAMFVVDAAAAQRMIDYSGLRVCRFGRGNRRALAVLM 60
Query 61 LVRYVDGDLGRYHEYGTAIMVNPPGT---QRRGPRALTRAAAFIHHLPVDQVFTLEAGRT 117
L+RY D DLG+Y+EYGT IMVNPPGT Q G RAL A AF+HHLPVDQ FTLEAGRT
Sbjct 61 LMRYEDTDLGQYYEYGTNIMVNPPGTSPSQATGLRALQSAGAFVHHLPVDQSFTLEAGRT 120
Query 118 IWGFPKIMADFNVTDGRRFGFDVSADGRLIAGIEFSTGLPVPTLGW---QMLKTYSHHDG 174
IWG+PK+MADF + GR+FGFDVS DGR ++F+ G+PVP+ Q+ TYSH DG
Sbjct 121 IWGYPKVMADFTIRHGRQFGFDVSIDGRHAVSMDFAPGIPVPSAFGSRPQVHSTYSHLDG 180
Query 175 VTREIPWEMKVSGLRARLGGARLRLGDHPYAKELASLGLPKRALLSQSAANVEMTFGD 232
VTRE +M +SG+R R GG LRLG+HPYA EL+SLGLPKRAL+S SAANV+MTF D
Sbjct 181 VTRETEGQMVLSGVRYRPGGVSLRLGEHPYAAELSSLGLPKRALVSSSAANVDMTFAD 238
>gi|145222132|ref|YP_001132810.1| hypothetical protein Mflv_1540 [Mycobacterium gilvum PYR-GCK]
gi|145214618|gb|ABP44022.1| conserved hypothetical protein [Mycobacterium gilvum PYR-GCK]
Length=254
Score = 296 bits (759), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 153/238 (65%), Positives = 182/238 (77%), Gaps = 8/238 (3%)
Query 3 VSQHTIAGTVLTMPVRIRTANLHSAMFSVPADPAQRLIDYSGLRVCEYLPG--KAIVMQM 60
V+QHTIAGTVLTMPVR+R A H+AMF V A AQR+IDYSGLRVC + G + + + M
Sbjct 11 VTQHTIAGTVLTMPVRVRRAYQHTAMFVVDAAAAQRMIDYSGLRVCRFGRGNRRVLAVLM 70
Query 61 LVRYVDGDLGRYHEYGTAIMVNPPGT---QRRGPRALTRAAAFIHHLPVDQVFTLEAGRT 117
L+RY D DLG+Y+EYGT IMVNPPGT Q G RAL A AF+HHLPVDQ FTLEAGRT
Sbjct 71 LMRYEDTDLGQYYEYGTNIMVNPPGTAPSQATGLRALQSAGAFVHHLPVDQSFTLEAGRT 130
Query 118 IWGFPKIMADFNVTDGRRFGFDVSADGRLIAGIEFSTGLPVPT-LGW--QMLKTYSHHDG 174
IWG+PK+MADF + GR+FGFDVS DGR ++F+ G+PVP+ G Q+ TYSH DG
Sbjct 131 IWGYPKVMADFTIRHGRQFGFDVSIDGRHAVSMDFAPGIPVPSAFGSRPQVHSTYSHLDG 190
Query 175 VTREIPWEMKVSGLRARLGGARLRLGDHPYAKELASLGLPKRALLSQSAANVEMTFGD 232
VTRE +M +SG+R R GG LRLG+HPYA EL+SLGLPKRAL+S SAANV+MTF D
Sbjct 191 VTRETEGQMVLSGVRYRPGGVSLRLGEHPYAAELSSLGLPKRALVSSSAANVDMTFAD 248
>gi|333992293|ref|YP_004524907.1| hypothetical protein JDM601_3653 [Mycobacterium sp. JDM601]
gi|333488261|gb|AEF37653.1| conserved hypothetical protein [Mycobacterium sp. JDM601]
Length=214
Score = 284 bits (727), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 137/208 (66%), Positives = 165/208 (80%), Gaps = 3/208 (1%)
Query 28 MFSVPADPAQRLIDYSGLRVCEYLPGKAIVMQMLVRYVDGDLGRYHEYGTAIMVNPPGTQ 87
MFSV AD AQ +IDYSGL+V ++ PG+A+V ML RY+DGDLG+YHE+GTA+MVNPPG+
Sbjct 1 MFSVSADAAQAMIDYSGLQVFQHRPGQAVVNLMLARYIDGDLGKYHEFGTAVMVNPPGSS 60
Query 88 RRGPRALTRAAAFIHHLPVDQVFTLEAGRTIWGFPKIMADFNVTDGRRFGFDVSADGRLI 147
RG RAL A AFIHHLPVDQ FTLEAGRTIWGFPK+MADF V DG+R GFDV+A G I
Sbjct 61 ARGWRALGSAGAFIHHLPVDQEFTLEAGRTIWGFPKVMADFTVRDGKRLGFDVAAGGEHI 120
Query 148 AGIEFSTGLPVPTLGW---QMLKTYSHHDGVTREIPWEMKVSGLRARLGGARLRLGDHPY 204
A +EF GLPVP L + L+ +SH DGVT ++PWEMKVSG+R +GG LRLG HPY
Sbjct 121 ATMEFGRGLPVPGLFTSRPRTLQAFSHLDGVTHQVPWEMKVSGVRGTVGGTTLRLGTHPY 180
Query 205 AKELASLGLPKRALLSQSAANVEMTFGD 232
A+ELA+LGLPKR ++S + +VEMTFGD
Sbjct 181 AQELAALGLPKRPMMSSTVGHVEMTFGD 208
>gi|226363941|ref|YP_002781723.1| hypothetical protein ROP_45310 [Rhodococcus opacus B4]
gi|226242430|dbj|BAH52778.1| hypothetical protein [Rhodococcus opacus B4]
Length=242
Score = 216 bits (551), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 120/242 (50%), Positives = 155/242 (65%), Gaps = 8/242 (3%)
Query 3 VSQHTIAGTVLTMPVRIRTANLHSAMFSVPADPAQRLIDYSGLRVCEYLPGKAIVMQMLV 62
++ H + G + MPV IR A+ +AMFSVP AQ LID++GL + ++ PG+ + + + V
Sbjct 1 MTSHQVLGKQVEMPVEIRAASAFTAMFSVPTAVAQSLIDHTGLEILQFRPGRGVCVLVFV 60
Query 63 RYVDGDLGRYHEYGTAIMVN---PPGTQR-RGPRALT--RAAAFIHHLPVDQVFTLEAGR 116
YVDGDLG Y+E+G + +V GT R +AL RA A IHHLPVD FTL AGR
Sbjct 61 DYVDGDLGPYNEFGVSFLVRDHRAAGTSVPRDLKALAQGRAGALIHHLPVDGDFTLAAGR 120
Query 117 TIWGFPKIMADFNVT-DGRRFGFDVSADGRLIAGIEFSTGLPVPTLGWQM-LKTYSHHDG 174
IWGFPK++A F V G VS GRLIA + G+PVP G L YSH DG
Sbjct 121 GIWGFPKVLAHFEVDHSGSVKRGSVSQGGRLIAQLSVKQGIPVPGSGASASLAAYSHLDG 180
Query 175 VTREIPWEMKVSGLRARLGGARLRLGDHPYAKELASLGLPKRALLSQSAANVEMTFGDGH 234
+TR W+MK SG+R+R GGA L+LG HP A EL SLGLPKRAL++ S +++MTFGD
Sbjct 181 LTRFTTWDMKPSGVRSRPGGAELKLGSHPIADELRSLGLPKRALVTSSIPDLKMTFGDAQ 240
Query 235 PI 236
P+
Sbjct 241 PV 242
>gi|111021558|ref|YP_704530.1| acetoacetate decarboxylase [Rhodococcus jostii RHA1]
gi|110821088|gb|ABG96372.1| possible acetoacetate decarboxylase [Rhodococcus jostii RHA1]
Length=242
Score = 216 bits (551), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 121/243 (50%), Positives = 154/243 (64%), Gaps = 10/243 (4%)
Query 3 VSQHTIAGTVLTMPVRIRTANLHSAMFSVPADPAQRLIDYSGLRVCEYLPGKAIVMQMLV 62
++ H + G + MPV IR A+ AM+SVP AQ LIDY+GL + ++ PG+ I + + V
Sbjct 1 MTSHQVLGKQVDMPVEIRAASAFMAMYSVPTRAAQSLIDYTGLEILQFRPGRGICVLVFV 60
Query 63 RYVDGDLGRYHEYGTAIMV-NPPGTQRRGPRALT-----RAAAFIHHLPVDQVFTLEAGR 116
YVDGDLG Y+E+G A +V + PR L RA A IHHLPVD FTL AGR
Sbjct 61 DYVDGDLGPYNEFGVAFLVRDHRADSTSVPRDLKALARGRAGALIHHLPVDGDFTLAAGR 120
Query 117 TIWGFPKIMADFNV--TDGRRFGFDVSADGRLIAGIEFSTGLPVPTLGW-QMLKTYSHHD 173
IWGFPK++ADF+V T R G VS DGRLIA + G+ VP G L YSH D
Sbjct 121 GIWGFPKVLADFDVDHTGSVRRG-SVSRDGRLIAQLSVKPGIAVPGSGAGTSLAAYSHLD 179
Query 174 GVTREIPWEMKVSGLRARLGGARLRLGDHPYAKELASLGLPKRALLSQSAANVEMTFGDG 233
G+TR W+M +G+R+R GGA L+LG HP A EL SLGLPKRAL++ S ++MTFGD
Sbjct 180 GLTRFTTWDMHPTGIRSRPGGAELKLGSHPIADELRSLGLPKRALVTSSIPELKMTFGDA 239
Query 234 HPI 236
P+
Sbjct 240 QPV 242
>gi|325674943|ref|ZP_08154630.1| acetoacetate decarboxylase [Rhodococcus equi ATCC 33707]
gi|325554529|gb|EGD24204.1| acetoacetate decarboxylase [Rhodococcus equi ATCC 33707]
Length=243
Score = 215 bits (547), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 121/245 (50%), Positives = 153/245 (63%), Gaps = 13/245 (5%)
Query 3 VSQHTIAGTVLTMPVRIRTANLHSAMFSVPADPAQRLIDYSGLRVCEYLPGKAIVMQMLV 62
+S H + G + MPV IRTA+ AM+SVP AQRL+D++GL + ++ G+ + + V
Sbjct 1 MSSHQVLGKQVDMPVEIRTASAFMAMYSVPTKAAQRLVDHTGLEILQWRGGRGLCGLVFV 60
Query 63 RYVDGDLGRYHEYGTAIMVNPPGTQ-----RRGPRALTR--AAAFIHHLPVDQVFTLEAG 115
Y+DGDLG Y+E+G MV + RR R+L R A A IH LPVD FTL AG
Sbjct 61 DYIDGDLGPYNEFGVTFMVRDHEQRGFNHVRRDLRSLARGKAGALIHQLPVDGEFTLAAG 120
Query 116 RTIWGFPKIMADF---NVTDGRRFGFDVSADGRLIAGIEFSTGLPVPTLGWQM-LKTYSH 171
R IWGFPKIMADF +V+D RR VS DGRLIA + G+P+P G L YSH
Sbjct 121 RGIWGFPKIMADFEADHVSDVRRG--RVSQDGRLIAELTVKQGIPMPGRGTNTSLDAYSH 178
Query 172 HDGVTREIPWEMKVSGLRARLGGARLRLGDHPYAKELASLGLPKRALLSQSAANVEMTFG 231
DGVTR W+M G+R RLGGA L LGDHP A EL SLGLP+RAL + + ++ MTFG
Sbjct 179 LDGVTRRTSWDMNPRGVRTRLGGAELTLGDHPIADELRSLGLPRRALATTTIPDLRMTFG 238
Query 232 DGHPI 236
D +
Sbjct 239 DASAV 243
>gi|312138152|ref|YP_004005488.1| hypothetical protein REQ_06860 [Rhodococcus equi 103S]
gi|311887491|emb|CBH46803.1| conserved hypothetical protein [Rhodococcus equi 103S]
Length=238
Score = 208 bits (529), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 118/241 (49%), Positives = 147/241 (61%), Gaps = 19/241 (7%)
Query 10 GTVLTMPVRIRTANLHSAMFSVPADPAQRLIDYSGLRVCEYLPGKAIVMQMLVRYVDGDL 69
G + MPV IRTA+ AM+SVP AQRL+D++GL + ++ G+ + + V Y+DGDL
Sbjct 3 GKQVDMPVEIRTASAFMAMYSVPTKAAQRLVDHTGLEILQWRGGRGLCGLVFVDYIDGDL 62
Query 70 GRYHEYGTAIMVNPPGTQR-----RGPRALTR--AAAFIHHLPVDQVFTLEAGRTIWGFP 122
G Y+E+G MV +R R R+L R A A IH LPVD FTL AGR IWGFP
Sbjct 63 GPYNEFGVTFMVRDHEQRRFNHVRRDLRSLARGKAGALIHQLPVDGEFTLAAGRGIWGFP 122
Query 123 KIMADF------NVTDGRRFGFDVSADGRLIAGIEFSTGLPVPTLGWQM-LKTYSHHDGV 175
KIMADF +V GR VS DGRLIA + G+P+P G L YSH DGV
Sbjct 123 KIMADFEADHVSDVRSGR-----VSQDGRLIAELTVKQGIPMPGRGTNTSLDAYSHLDGV 177
Query 176 TREIPWEMKVSGLRARLGGARLRLGDHPYAKELASLGLPKRALLSQSAANVEMTFGDGHP 235
TR W+M G+R RLGGA L LGDHP A EL SLGLP+RAL + + ++ MTFGD
Sbjct 178 TRRTSWDMNPRGVRTRLGGAELTLGDHPIADELRSLGLPRRALATTTIPDLRMTFGDASA 237
Query 236 I 236
+
Sbjct 238 V 238
>gi|269128299|ref|YP_003301669.1| hypothetical protein Tcur_4103 [Thermomonospora curvata DSM 43183]
gi|268313257|gb|ACY99631.1| hypothetical protein Tcur_4103 [Thermomonospora curvata DSM 43183]
Length=238
Score = 205 bits (521), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 122/240 (51%), Positives = 151/240 (63%), Gaps = 9/240 (3%)
Query 3 VSQHTIAGTVLTMPVRIRTANLHSAMFSVPADPAQRLIDYSGLRVCEYLPGKAIVMQMLV 62
+S H I G + MPV+IR A + SAMF+VPA AQ++IDYSGL+V LPG+AI V
Sbjct 1 MSTHLIQGRKVAMPVQIRRAAVASAMFAVPAGTAQQIIDYSGLQVLRPLPGRAICSLAFV 60
Query 63 RYVDGDLGRYHEYGTAIMVNPPGTQRRGPRALTRAAAFIHHLPVDQVFTLEAGRTIWGFP 122
RYVDGDLG YHE+ A +V P GP FIH LPVDQ FTLEAGR+IWGFP
Sbjct 61 RYVDGDLGPYHEFAVAFLVRDP-LGGSGPG--RNVGVFIHWLPVDQGFTLEAGRSIWGFP 117
Query 123 KIMADFNVT-DGRRFGFDVSADGRLIAGIEFSTGLPVPTLGWQ-MLKTYSHHDGVTREIP 180
K+MA+ + DG V DG+L+A + GLPVPT G + +S DGVTR +P
Sbjct 118 KLMAELPLDLDGAVRRCAVRVDGQLVAAVAIRPGLPVPTRGAAPEVVAFSCLDGVTRRVP 177
Query 181 WEMKVSGLRARLGGARLRLGD---HPYAKELASLGLPK-RALLSQSAANVEMTFGDGHPI 236
W ++ G+R R GGA +R+GD HP A EL LGL + RAL S +AA V MTF D P+
Sbjct 178 WSVRPEGVRFRPGGAVVRVGDPAGHPVADELHRLGLHRARALSSTTAAQVRMTFHDAQPL 237
>gi|226304254|ref|YP_002764212.1| hypothetical protein RER_07650 [Rhodococcus erythropolis PR4]
gi|229494470|ref|ZP_04388233.1| putative acetoacetate decarboxylase [Rhodococcus erythropolis
SK121]
gi|226183369|dbj|BAH31473.1| conserved hypothetical protein [Rhodococcus erythropolis PR4]
gi|229318832|gb|EEN84690.1| putative acetoacetate decarboxylase [Rhodococcus erythropolis
SK121]
Length=242
Score = 201 bits (510), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 111/241 (47%), Positives = 149/241 (62%), Gaps = 9/241 (3%)
Query 5 QHTIAGTVLTMPVRIRTANLHSAMFSVPADPAQRLIDYSGLRVCEYLPGKAIVMQMLVRY 64
+TI G + MPV +RTA+ A++SVP+ AQ +IDY+GL V +Y PG+A+ + V Y
Sbjct 2 SYTILGKKVEMPVEVRTASAFMALYSVPSTTAQSIIDYTGLTVLQYRPGRALCGLVFVDY 61
Query 65 VDGDLGRYHEYGTAIMVN----PPGTQRRGP-RALT--RAAAFIHHLPVDQVFTLEAGRT 117
+DGDLG Y+E+G MV PP T G R+L A A IH LPVD FT AGR
Sbjct 62 IDGDLGPYNEFGVTYMVRSHTAPPETSVLGDLRSLAAGTAGALIHELPVDGEFTKAAGRE 121
Query 118 IWGFPKIMADFNVTD-GRRFGFDVSADGRLIAGIEFSTGLPVPTLGWQM-LKTYSHHDGV 175
IWGFPK++A+F+ G VS DG+LI + +G+ VP G M L YSH DG
Sbjct 122 IWGFPKVLAEFDTEHVGSVKRGSVSRDGKLITQLSVKSGVSVPGGGANMSLAAYSHLDGA 181
Query 176 TREIPWEMKVSGLRARLGGARLRLGDHPYAKELASLGLPKRALLSQSAANVEMTFGDGHP 235
TR W+M +G+++R GGA ++LG HP A EL LGLP+RAL++ + N+ MTFG+
Sbjct 182 TRCTSWDMAPTGVKSRPGGAEVQLGSHPMAAELRKLGLPRRALMTTTIKNLAMTFGEATT 241
Query 236 I 236
I
Sbjct 242 I 242
>gi|271962902|ref|YP_003337098.1| hypothetical protein Sros_1360 [Streptosporangium roseum DSM
43021]
gi|270506077|gb|ACZ84355.1| hypothetical protein Sros_1360 [Streptosporangium roseum DSM
43021]
Length=245
Score = 198 bits (504), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 117/245 (48%), Positives = 150/245 (62%), Gaps = 11/245 (4%)
Query 3 VSQHTIAGTVLTMPVRIRTANLHSAMFSVPADPAQRLIDYSGLRVCEYLPGKAIVMQMLV 62
+++H I G + MPVRIR A++ SA + V AD A+ +I YSGL V E LPGKA+ + V
Sbjct 1 MARHLIQGREIAMPVRIRDASVCSASYLVRADAARAVIAYSGLDVAEVLPGKALCTLVFV 60
Query 63 RYVDGDLGRYHEYGTAIMVNPPGTQ-------RRGPRALTR--AAAFIHHLPVDQVFTLE 113
Y DGDL Y E+G A +V PP R G L R A AFIH LPVDQ FTLE
Sbjct 61 DYADGDLDAYREFGVAFLVRPPDGGRPPPRGLRAGLSELRRAGAGAFIHWLPVDQGFTLE 120
Query 114 AGRTIWGFPKIMADFNVTDGRRFGFDV-SADGRLIAGIEFSTGLPVPTLGWQM-LKTYSH 171
AGR IWGFPK +AD ++ + + DGRL+ + G PVP G + YSH
Sbjct 121 AGRRIWGFPKELADIDLRLSSPYKRCILRKDGRLVLDLLIKPGAPVPGGGTMAPVDAYSH 180
Query 172 HDGVTREIPWEMKVSGLRARLGGARLRLGDHPYAKELASLGLPKRALLSQSAANVEMTFG 231
DGVTR PW M G+R R GGA +RLG+HP AKEL+ LGLPKRAL++ + +++ MTFG
Sbjct 181 LDGVTRRTPWSMSPRGVRMRPGGALIRLGNHPVAKELSELGLPKRALMTSTVSHLTMTFG 240
Query 232 DGHPI 236
+ +
Sbjct 241 EAKEL 245
>gi|54026109|ref|YP_120351.1| hypothetical protein nfa41380 [Nocardia farcinica IFM 10152]
gi|54017617|dbj|BAD58987.1| hypothetical protein [Nocardia farcinica IFM 10152]
Length=251
Score = 195 bits (496), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 118/236 (50%), Positives = 140/236 (60%), Gaps = 10/236 (4%)
Query 6 HTIAGTVLTMPVRIRTANLHSAMFSVPADPAQRLIDYSGLRVCEYLPGKAIVMQMLVRYV 65
H + G + MPVRIRTA+ A + VP AQRLIDYSGLRV G+A+ + V YV
Sbjct 13 HLVLGQEIRMPVRIRTAHAFMASYLVPVAAAQRLIDYSGLRVLGLPGGRAMCTMVFVEYV 72
Query 66 DGDLGRYHEYGTAIMVNPPGTQRRGPRALTR------AAAFIHHLPVDQVFTLEAGRTIW 119
DGDLG YHE+G + MV G A R A FIH LPVD FTL AGR IW
Sbjct 73 DGDLGPYHEFGVSFMVRHHTATGGGTLADLRGLLGGSAGVFIHRLPVDGEFTLAAGRGIW 132
Query 120 GFPKIMADFNVT-DGRRFGFDVSADGRLIAGIEFSTGLPVPTL--GWQMLKTYSHHDGVT 176
GFPK +ADF+VT G R G + +G LIA + GLP P YSH DGVT
Sbjct 133 GFPKELADFDVTHHGVRRG-ALRQNGALIAELTVRPGLPTPLRRGAGASFDAYSHIDGVT 191
Query 177 REIPWEMKVSGLRARLGGARLRLGDHPYAKELASLGLPKRALLSQSAANVEMTFGD 232
R WEM +G+RAR GGA L LGDHP+A ELASLGLP+RA+ + + + M F D
Sbjct 192 RCTRWEMAPTGMRARPGGAELVLGDHPWAAELASLGLPRRAVSASTVERLAMVFED 247
>gi|343927752|ref|ZP_08767220.1| hypothetical protein GOALK_097_01740 [Gordonia alkanivorans NBRC
16433]
gi|343762393|dbj|GAA14146.1| hypothetical protein GOALK_097_01740 [Gordonia alkanivorans NBRC
16433]
Length=251
Score = 177 bits (450), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 112/242 (47%), Positives = 136/242 (57%), Gaps = 16/242 (6%)
Query 4 SQHTIAGTVLTMPVRIRTANLHSAMFSVPADPAQRLIDYSG-----LRVCEYLPGKAIVM 58
S H I GT +TMPV IR A A F+ A QR ID LR PG+A+ M
Sbjct 5 SSHDILGTTVTMPVEIRHAQCFVAGFTADAAAVQRAIDSESARPGTLRPLRVRPGRAMCM 64
Query 59 QMLVRYVDGDLGRYHEYGTAIMVNPPGTQRRGP----RALTR--AAAFIHHLPVDQVFTL 112
+ V YVDGDLG Y+E+G +V+ P P R+L + A A +H LPVD FTL
Sbjct 65 LVFVDYVDGDLGPYNEFGVCFLVDDPSQPPTSPLGALRSLAKGDARALVHRLPVDGDFTL 124
Query 113 EAGRTIWGFPKIMADFNV--TDGRRFGFDVSADGRLIAGIEFSTGLPVP-TLGWQMLKTY 169
AGR IWGFPK +A+F+V T R G + ADG LIA + G+ VP T +L Y
Sbjct 125 AAGRGIWGFPKTLAEFDVDHTSSTRRG-RLEADGSLIADLRIKPGVKVPDTTADTVLHAY 183
Query 170 SHHDGVTREIPWEM-KVSGLRARLGGARLRLGDHPYAKELASLGLPKRALLSQSAANVEM 228
S DGVTR PW + VSG R RLGGA L LGDHP A EL SL L + AL++ S + M
Sbjct 184 SQLDGVTRLTPWRLTSVSGTRTRLGGASLTLGDHPIAAELRSLRLGRHALMTSSVEKITM 243
Query 229 TF 230
F
Sbjct 244 RF 245
>gi|296270576|ref|YP_003653208.1| hypothetical protein Tbis_2613 [Thermobispora bispora DSM 43833]
gi|296093363|gb|ADG89315.1| hypothetical protein Tbis_2613 [Thermobispora bispora DSM 43833]
Length=246
Score = 171 bits (433), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 100/245 (41%), Positives = 141/245 (58%), Gaps = 12/245 (4%)
Query 3 VSQHTIAGTVLTMPVRIRTANLHSAMFSVPADPAQRLIDYSGLRVCEYLPGKAIVMQMLV 62
++ H I G + PVRIR A +A++ V A+ A+ ++ YSGL E LPG+A+
Sbjct 1 MTSHLIRGRRVGTPVRIRDATACAAVYLVRAEAARAVLAYSGLDAVEVLPGRAVCTLAFA 60
Query 63 RYVDGDLGRYHEYGTAIMVNPPGTQRRGPRALT------RAAAFIHHLPVDQVFTLEAGR 116
+Y DGDLG YHE+ A + PPG AL+ A A +H +PVD+ FT EAGR
Sbjct 61 QYRDGDLGAYHEFAMAFLARPPGGGSGRRGALSVLRDLRSAGAIVHWMPVDEEFTFEAGR 120
Query 117 TIWGFPKIMADFNV-TDGRRFGFDVSADGRLIAGIEFSTGLPVPT--LGWQMLK---TYS 170
IWGFPK +A ++ G + DGRL+ + G+PVP +GW L ++
Sbjct 121 AIWGFPKELATIDLRLSGPYKRCVLKKDGRLVLDMLVRPGIPVPDPPIGWPWLTAPVAFT 180
Query 171 HHDGVTREIPWEMKVSGLRARLGGARLRLGDHPYAKELASLGLPKRALLSQSAANVEMTF 230
H DGVTR +PW +V G+R R GGA +RLG+HP AKEL+ LGLPK A L+ + + ++
Sbjct 181 HLDGVTRRVPWSFRVRGVRLRPGGALIRLGNHPIAKELSELGLPKHAFLTVTFGGLSLSI 240
Query 231 GDGHP 235
+ P
Sbjct 241 EEPLP 245
>gi|326383180|ref|ZP_08204868.1| hypothetical protein SCNU_09599 [Gordonia neofelifaecis NRRL
B-59395]
gi|326197930|gb|EGD55116.1| hypothetical protein SCNU_09599 [Gordonia neofelifaecis NRRL
B-59395]
Length=244
Score = 170 bits (431), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 106/238 (45%), Positives = 133/238 (56%), Gaps = 11/238 (4%)
Query 10 GTVLTMPVRIRTANLHSAMFSVPADPAQRLIDYS---GLRVCEYLPGKAIVMQMLVRYVD 66
GT +TMPV+IR+A A F+ + + L E G+AI M + V Y D
Sbjct 3 GTDVTMPVQIRSARCFVAGFTASTEAVAAAVRRRGAADLAPLEVRRGRAICMVVFVDYRD 62
Query 67 GDLGRYHEYGTAIMVNPPGTQRRGPRALTR-----AAAFIHHLPVDQVFTLEAGRTIWGF 121
GDLG Y+E+G ++ PPG R L A A IH LPVD FT+ AGR IWGF
Sbjct 63 GDLGPYNEFGVCFLMQPPGAAASPLRTLRSLGSGDAHALIHQLPVDGEFTMAAGRGIWGF 122
Query 122 PKIMADFNVT-DGRRFGFDVSADGRLIAGIEFSTGLPVP-TLGWQMLKTYSHHDGVTREI 179
PK++ADF+V D VS DGRLIA + GLPVP T +L+ YS DGVTR
Sbjct 123 PKVLADFDVDHDSAVKHGRVSQDGRLIADLTVGRGLPVPDTARDTVLQAYSQLDGVTRRT 182
Query 180 PWEMKVS-GLRARLGGARLRLGDHPYAKELASLGLPKRALLSQSAANVEMTFGDGHPI 236
PW + + G R R+GGARL LGDHP A EL L L + AL++ S A++ M F D I
Sbjct 183 PWRLTSTVGTRTRIGGARLTLGDHPMADELRRLDLSRTALMASSVADLSMVFDDATVI 240
>gi|262203594|ref|YP_003274802.1| hypothetical protein Gbro_3725 [Gordonia bronchialis DSM 43247]
gi|262086941|gb|ACY22909.1| hypothetical protein Gbro_3725 [Gordonia bronchialis DSM 43247]
Length=254
Score = 168 bits (425), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 105/241 (44%), Positives = 127/241 (53%), Gaps = 14/241 (5%)
Query 4 SQHTIAGTVLTMPVRIRTANLHSAMFSVPADPAQRLIDYSG-----LRVCEYLPGKAIVM 58
S H + GT +TMPV IR A A FS A QR ID + LR PG+A+ M
Sbjct 5 STHDVLGTTVTMPVEIRDARCFVAGFSADAAAVQRAIDSAAPRVGTLRPLRIRPGRAMCM 64
Query 59 QMLVRYVDGDLGRYHEYGTAIMVNPPGTQRRGPRALTR------AAAFIHHLPVDQVFTL 112
+ + YVDGDLG Y+E+G +V P P A R A A IH LPVD FTL
Sbjct 65 IVFIDYVDGDLGPYNEFGVCFLVEDPQAPPTSPVAAMRKLIRGDARALIHRLPVDGEFTL 124
Query 113 EAGRTIWGFPKIMADFNVT-DGRRFGFDVSADGRLIAGIEFSTGLPVP-TLGWQMLKTYS 170
AGR IWGFPK +A+F+V D V DGR G+ G+PVP + +L YS
Sbjct 125 AAGRGIWGFPKTLAEFDVDHDSATKHGKVRVDGRTAVGLRVRPGIPVPGSAADTVLNAYS 184
Query 171 HHDGVTREIPWEM-KVSGLRARLGGARLRLGDHPYAKELASLGLPKRALLSQSAANVEMT 229
DGV R PW + R R+GGARL LG P A EL SL L + AL+S S + MT
Sbjct 185 QLDGVLRLTPWRLTSTQDTRTRVGGARLTLGQGPIADELRSLRLSRHALMSSSVGRLTMT 244
Query 230 F 230
F
Sbjct 245 F 245
>gi|323717789|gb|EGB26986.1| hypothetical protein TMMG_00005 [Mycobacterium tuberculosis CDC1551A]
Length=62
Score = 105 bits (262), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 51/56 (92%), Positives = 53/56 (95%), Gaps = 0/56 (0%)
Query 181 WEMKVSGLRARLGGARLRLGDHPYAKELASLGLPKRALLSQSAANVEMTFGDGHPI 236
+ + SGLRARLGGARLRLGDHPYAKELASLGLPKRALLSQSAANVEMTFGDGHPI
Sbjct 7 YAARASGLRARLGGARLRLGDHPYAKELASLGLPKRALLSQSAANVEMTFGDGHPI 62
>gi|15843129|ref|NP_338166.1| hypothetical protein MT3620 [Mycobacterium tuberculosis CDC1551]
gi|13883478|gb|AAK47980.1| hypothetical protein MT3620 [Mycobacterium tuberculosis CDC1551]
Length=73
Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/49 (90%), Positives = 46/49 (94%), Gaps = 0/49 (0%)
Query 181 WEMKVSGLRARLGGARLRLGDHPYAKELASLGLPKRALLSQSAANVEMT 229
+ + SGLRARLGGARLRLGDHPYAKELASLGLPKRALLSQSAANVEMT
Sbjct 7 YAARASGLRARLGGARLRLGDHPYAKELASLGLPKRALLSQSAANVEMT 55
>gi|331694425|ref|YP_004330664.1| acetoacetate decarboxylase [Pseudonocardia dioxanivorans CB1190]
gi|326949114|gb|AEA22811.1| Acetoacetate decarboxylase [Pseudonocardia dioxanivorans CB1190]
Length=229
Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/225 (34%), Positives = 113/225 (51%), Gaps = 19/225 (8%)
Query 1 MPVSQHTIAGTVLTMPVRIRTANLHSAMFSVPADPAQRLIDYSGLRVCEYLPGKAIVMQM 60
M +H + G +T PVRIR A +A++ V AD + L+ +GL V G+ + +
Sbjct 1 MSTQEHIVEGRRVTFPVRIRDAAASAAVYPVRADRVRPLVTGTGLDVAAA-AGRTLAVLA 59
Query 61 LVRYVDGDLGRYHEYGTAIMVNPPGTQRRGPRALTRAAAFIHHLPVDQVFTLEAGRTIWG 120
VRY DLG Y E G A+ V +RRG R A + HLPV FT+ AGR +WG
Sbjct 60 FVRYRVNDLGVYDEVGLAVPV-----RRRG-----RLGAHVLHLPVTATFTMAAGRALWG 109
Query 121 FPKIM--ADFNVTDGRRFGFDVSADGRLIAGIEFSTGLPVP-TLGWQMLKTYSHHDGVTR 177
PK + A+ +V +A GR++ ++ +P TL ++ D V R
Sbjct 110 LPKWLATAELSVEPSLTTCRLDAASGRVLDAALRTSSPRLPFTLPARVTTLAPRGDVVLR 169
Query 178 EIPWEMKVSGLRARLG-GARLRLGD-HPYAKELASLGLPKRALLS 220
+ + + RLG A LR+GD HP A +L +L LP+R L++
Sbjct 170 SV---ARGTARGVRLGHSAGLRIGDGHPMAADLRALDLPRRPLVT 211
>gi|288916350|ref|ZP_06410729.1| hypothetical protein FrEUN1fDRAFT_0422 [Frankia sp. EUN1f]
gi|288352329|gb|EFC86527.1| hypothetical protein FrEUN1fDRAFT_0422 [Frankia sp. EUN1f]
Length=238
Score = 82.4 bits (202), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/221 (29%), Positives = 93/221 (43%), Gaps = 29/221 (13%)
Query 7 TIAGTVLTMPVRIRTANLHSAMFSVPADPAQRLIDYSGLRVCEYLPGKAIVMQMLVRYVD 66
TI G +T P+R+ N + +SVPA A L+ + + E PG ++ +
Sbjct 9 TIDGAEITFPMRVEAFNAATLTYSVPAREAAALLPGNSFELVETAPGVGCLVIAACDFRR 68
Query 67 GDLGRYHEYGTAIMVNPPGTQRRGPRALTRAAAFIHHLPVDQVFTLEAGRTIWGFPKIMA 126
G Y+E + P G +FI+ +PV+Q FT EAG + GFPK +
Sbjct 69 NPWGDYNELNVGFLSRPSGAGDE------TVGSFIYRMPVNQPFTCEAGNRVMGFPKTVE 122
Query 127 DFNVT-DGRRFGFDVSADGRLIAGIEFSTGLPVPTLGWQ------------MLKTYSHHD 173
+ G F F VS+ GLP TLG+ ++++YS+ D
Sbjct 123 TISAGYGGGGFTFRVSS----------PAGLPALTLGFPRRPAPLGPPVVLIVESYSYLD 172
Query 174 GVTREIPWEMKVSGLRARLGGARLRLGDHPYAKELASLGLP 214
G EM++ L LG+ P A EL LGLP
Sbjct 173 GHPYATAAEMEIGSDAVDPSEVSLELGEGPLADELRGLGLP 213
>gi|296165657|ref|ZP_06848178.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295898992|gb|EFG78477.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length=247
Score = 72.4 bits (176), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/222 (29%), Positives = 102/222 (46%), Gaps = 26/222 (11%)
Query 10 GTVLTMPVRIRTANLHSAMFSVPADPAQRLIDYSGLRVCEYLPGKAIVMQMLVRYVDGDL 69
G+V+ MP+ A +AMF++ A A L+ LR P +A+VM +++Y D +
Sbjct 21 GSVVQMPLLTYRARSFAAMFTISAAKATALLPTDALRPVRVSPRRALVMVQVMQYTDKSI 80
Query 70 GRYHEYGTAIM------VNPPGTQRRGPRALTRAAAFIHHLPVDQVFTLEAGRTIWGFPK 123
Y E+ +I+ V+ PG + L + ++I H+ VD G + GFPK
Sbjct 81 APYQEFVFSILVHRSRRVDVPGVSAALWQRLPGSGSYITHIAVDDEEGRLIGLEVLGFPK 140
Query 124 IMADFNVTDGRRFGF-DVSADGRLIAGIEFSTGLPVPTLGWQMLK------TYSHHDGVT 176
+A + + R +VSADG+ I F+ + PT + + + S D
Sbjct 141 FIAGIELAETPRERLAEVSADGQSI----FTLAISRPTKAHRQQRRDFYCYSLSPIDNTI 196
Query 177 REIPWEMK-----VSGLRARLGGARLRLGDHPYAKELASLGL 213
+P+E + + G RA ARL LG HP A EL L +
Sbjct 197 FHVPYESQADAALIWGPRA----ARLHLGSHPVADELRDLDV 234
>gi|108763161|ref|YP_633096.1| hypothetical protein MXAN_4940 [Myxococcus xanthus DK 1622]
gi|108467041|gb|ABF92226.1| hypothetical protein MXAN_4940 [Myxococcus xanthus DK 1622]
Length=293
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/234 (26%), Positives = 104/234 (45%), Gaps = 34/234 (14%)
Query 8 IAGTVLTMPVRIRTANLHSAMFSVPADPAQRLIDYSGLRVCEYLPGKAIVMQMLVRYVDG 67
+ G T+P+ +++ + A F+V A+ A RL+ + L + +++ ++ Y
Sbjct 19 VDGIPYTLPINSKSSPVLMAAFTVDAEQAARLLPGNELHPLRVSRRRGVLLVTVIDYRTT 78
Query 68 DLGRYHEYGTAIMVNPPGTQRRGPRALTRA------------AAFIHHLPVDQVFTLEAG 115
D+G Y E+ AI RGPR +R ++ LPV+ +++ G
Sbjct 79 DIGAYIEFSIAIACT------RGPRP-SRPLLPLMFQKRHGLGQYVFDLPVNTEVSVKGG 131
Query 116 RTIWGFPKIMA--DFNVTDGRRFGFDVSADGRLIAGIEFSTGLPVPTLGWQMLKTYSHHD 173
+ IWG PK +A DF + DG G+ +A IE P W L + +
Sbjct 132 KGIWGMPKHLANLDFRIQDG-TVSSRYDEGGQQVALIEIDR----PRRAWLPLYATAVNY 186
Query 174 GVTREIPWEMKVSGLRARLG-------GARLRLGDHPYAKELASLGLPKRALLS 220
R + ++ + R + G GARL +GDHP + L +LG+ +RA +
Sbjct 187 CAFRGMLFKSYIY-FRGKFGFRLGKRAGARLVMGDHPRIRPLRALGISRRAFFT 239
>gi|319950328|ref|ZP_08024247.1| hypothetical protein ES5_12160 [Dietzia cinnamea P4]
gi|319436020|gb|EFV91221.1| hypothetical protein ES5_12160 [Dietzia cinnamea P4]
Length=258
Score = 65.1 bits (157), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 77/267 (29%), Positives = 106/267 (40%), Gaps = 48/267 (17%)
Query 4 SQHTIAGTVLTMPVRIRTANLHSAMFSVPADPAQRLI---------DYSGLRVCEYLPGK 54
+ +AG +T PV + +A++ A F + +RLI + +G G+
Sbjct 5 TSRVVAGREITFPVTVVSASVSGAAFLARSAVVRRLIAGGRQSAVIEAAGAEPVSLPGGR 64
Query 55 AIVMQMLVRYVD---GDLGRYHEYGTAIMVNPPGTQRRGPRALTRAAAFIHHLPVDQVFT 111
+ + VRY D LG YHE G A + PG IH LPVDQ FT
Sbjct 65 TPAIMIHVRYHDVPGNVLGAYHEIGLAFQLAVPGAG---------TLVHIHELPVDQDFT 115
Query 112 LEAGRTIWGFPKIMADFNVTDGRRFGFDVSADGRLIAG-----------IEFSTGLPVPT 160
L AG +WGFPK D T G D RL A ++ GLP+P
Sbjct 116 LAAGNELWGFPKWKGDMVGTAGGALD-----DARLGAVGSAGAGGVDLRLDTRVGLPIPG 170
Query 161 LGWQMLKTYSHHDGVTREIPWEMKVSGLRAR-LGGARLRL--------GDHP-YAKELAS 210
+ DG + +G R R L GAR+ + GD +A+ +
Sbjct 171 RQSLAMNCVQVLDGAPVLVRARATATGGRMRPLSGARVTIAPGADDAGGDVARFAEAVRE 230
Query 211 LGLPK-RALLSQSAANVEMTFGDGHPI 236
LGL + RAL + S E F PI
Sbjct 231 LGLDRARALGTFSYEKFEAEFQAPAPI 257
>gi|257053591|ref|YP_003131424.1| Acetoacetate decarboxylase [Halorhabdus utahensis DSM 12940]
gi|256692354|gb|ACV12691.1| Acetoacetate decarboxylase [Halorhabdus utahensis DSM 12940]
Length=240
Score = 59.3 bits (142), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 73/244 (30%), Positives = 109/244 (45%), Gaps = 32/244 (13%)
Query 10 GTVLTMPVRIRTANLHSAMFSVPADPA---QRLIDYSGLRVCEYLPGKAIVMQMLVRYV- 65
G +PV + +A + A+F PAD A QRL +G+ A + ++VRY
Sbjct 10 GHTFELPVSL-SATIAGAVF--PADRAAVEQRL--PAGIAPVGMRADSAAMTVLVVRYDR 64
Query 66 --DGDLGRYHEYGTAIMVNPPGTQRRGPRALTRAAA--FIHHLPVDQVFTLEAGRTIWGF 121
+ + Y E G GT+ +L R A ++ LPV G IWG+
Sbjct 65 VGEETIPPYDEVGVLFPAVEAGTRTIPLLSLLRRAVSGYVETLPVTTEPARAFGVDIWGY 124
Query 122 PKIMADFNVTD-GRRFGFDVSADGR--LIAGIEFSTGLPVPTLGWQMLKTYSHHDGVTRE 178
PK++AD +VTD G+ V ADG L A I+ LP G+ D + RE
Sbjct 125 PKLVADIDVTDEGKTRTATVRADGETLLSAAIQRPPTLPARLSGYNFTL---KDDRLLRE 181
Query 179 IPWEMKVSGLRARLGG------ARLRLGDHPYAKELASLGLPKRALLSQSAANVEMTFGD 232
+ LR R+G A + G+HP ++L ++ + RA+L + AA+ T G
Sbjct 182 ------PTKLRGRVGAWPATSRASVSFGEHPIGRQLGAIDVGDRAIL-RLAADCTFTIGA 234
Query 233 GHPI 236
G PI
Sbjct 235 GEPI 238
>gi|343087021|ref|YP_004776316.1| hypothetical protein Cycma_4383 [Cyclobacterium marinum DSM 745]
gi|342355555|gb|AEL28085.1| hypothetical protein Cycma_4383 [Cyclobacterium marinum DSM 745]
Length=295
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/166 (28%), Positives = 69/166 (42%), Gaps = 20/166 (12%)
Query 8 IAGTVLTMPVRIRTANLHSAMFSVPADPAQRLIDYSGLRVCEYLPGKAIVMQMLVRYVDG 67
+ G TMPV + A FS + A L+ + + + G+A +M ++ Y+D
Sbjct 16 VDGIPYTMPVSSSDSPALMAGFSCDWEKANALLPGNEIHAMKLPNGRAALMITIINYLDT 75
Query 68 DLGRYHEYGTAIMVNPPGTQRRGPRALTR-------AAAFIHHLPVDQVFTLEAGRTIWG 120
+G+Y EY AI + PR L +I LPV +++ G+ IWG
Sbjct 76 SIGKYIEYSIAIACT--HGSKPAPRILNTLLLGPYGTGQYILDLPVSSEISVKGGKGIWG 133
Query 121 FPKIMA--DFNVTDGR---------RFGFDVSADGRLIAGIEFSTG 155
PK A DF VTD + +F F + D I+ G
Sbjct 134 MPKHKANLDFKVTDDQVTSQYEKDGQFAFRIEIDKPKSPSIKLKVG 179
>gi|171058551|ref|YP_001790900.1| hypothetical protein Lcho_1868 [Leptothrix cholodnii SP-6]
gi|170775996|gb|ACB34135.1| conserved hypothetical protein [Leptothrix cholodnii SP-6]
Length=294
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/224 (28%), Positives = 98/224 (44%), Gaps = 29/224 (12%)
Query 8 IAGTVLTMPVRIRTANLHSAMFSVPADPAQRLI---DYSGLRVCEYLPGKAIVMQMLVRY 64
+ G MP+ + A+FS+ AD A+RLI + LR+ + + +++ ++ Y
Sbjct 17 VDGIRFEMPINSERSPALMAVFSIDADAARRLIPGNEVHPLRLWK----RGLLVVTVIDY 72
Query 65 VDGDLGRYHEYGTAIMVNPPGTQRRGPRALTR--------AAAFIHHLPVDQVFTLEAGR 116
D+G+Y EY AI RR L ++ LPV +++ G+
Sbjct 73 RVTDIGQYIEYSIAIACT---HGRRPAPPLLPGLLMKTFGTGQYVWDLPVSSEVSVKGGK 129
Query 117 TIWGFPKIMADFNVTDGRRF-GFDVSADGRLIAGIEF----STGLPVPTLGWQMLKTYSH 171
IWG PK A + GR++ DGR++ I+ S LPV LG Y
Sbjct 130 GIWGMPKHQASLDFVIGRQWVSSQYDLDGRMMMRIDVRKPSSAWLPV-NLG---AANYCA 185
Query 172 HDG--VTREIPWEMKVSGLRARLGGARLRLGDHPYAKELASLGL 213
G + I ++ K+ R G ARL +GDHP L +L +
Sbjct 186 FRGMLMKSNIYFKGKLGLSLFRPGSARLLIGDHPRMAPLWTLDI 229
>gi|335433572|ref|ZP_08558392.1| Acetoacetate decarboxylase [Halorhabdus tiamatea SARL4B]
gi|334898578|gb|EGM36682.1| Acetoacetate decarboxylase [Halorhabdus tiamatea SARL4B]
Length=239
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 71/244 (30%), Positives = 116/244 (48%), Gaps = 32/244 (13%)
Query 10 GTVLTMPVRIRTANLHSAMFSVPADPA--QRLIDYSGLRVCEYLPGKAIVMQMLVRYVDG 67
G +PV + +A + A+F PAD A + L+ +GL +A + ++VRY
Sbjct 10 GQTFELPVSL-SATIAGAVF--PADRAAVEELLP-TGLEPVGTRADRAAMTVLVVRY--D 63
Query 68 DLGR-----YHEYGTAIMVNPPGTQRRGPRALTR--AAAFIHHLPVDQVFTLEAGRTIWG 120
+GR Y E G GT+ +L R A+ ++H LPV G +WG
Sbjct 64 RVGRETIPPYDEVGVLFPAVEAGTRTVPYVSLLRRPASGYVHTLPVTTEPARAFGVDVWG 123
Query 121 FPKIMADFNVTD-GR-RFGFDVSADGRLIAGIEFSTGLPVPTLGWQMLKTYSHHDGVTRE 178
+PK++A +VTD GR R +A+G L++ S P PT+ ++ S ++ ++
Sbjct 124 YPKLVATIDVTDEGRTRRATVTTAEGTLLS---VSIRRP-PTVPARL----SGYNFTIKD 175
Query 179 IPWEMKVSGLRARLG------GARLRLGDHPYAKELASLGLPKRALLSQSAANVEMTFGD 232
+ + LR R+G GA L G+HP ++L +G+ L + AA+ E T G
Sbjct 176 DKRLREPTTLRGRVGGWFGGKGASLSFGEHPTGRQLDDIGVGTEPLF-RLAADCEFTIGA 234
Query 233 GHPI 236
G P+
Sbjct 235 GEPL 238
>gi|186682617|ref|YP_001865813.1| hypothetical protein Npun_F2282 [Nostoc punctiforme PCC 73102]
gi|186465069|gb|ACC80870.1| conserved hypothetical protein [Nostoc punctiforme PCC 73102]
Length=302
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/225 (23%), Positives = 89/225 (40%), Gaps = 16/225 (7%)
Query 8 IAGTVLTMPVRIRTANLHSAMFSVPADPAQRLIDYSGLRVCEYLPGKAIVMQMLVRYVDG 67
+ G +PV A+F + AD A+ LI + + +++ ++ Y
Sbjct 16 VDGIPFQLPVNSEQTPALMAVFPINADRAKELILAKEVHPLRLWNNQGLLVITVINYQIT 75
Query 68 DLGRYHEYGTAIMVNPPGTQRRGPRALTR-----AAAFIHHLPVDQVFTLEAGRTIWGFP 122
D+G+Y E+ AI ++ LPV +++ G+ IWG P
Sbjct 76 DIGKYIEFSIAIACTHGAKPAPPLLPGLLMQQYGTGQYVLDLPVSTEISVKGGKGIWGMP 135
Query 123 KIMADFNVTDG-RRFGFDVSADGRLIAGIEFSTGLPVPTLGWQMLK----TYSHHDGVTR 177
K A+ + G R DG+L+ IE + P W LK Y G+
Sbjct 136 KHQANLDFVIGDRTVSSQYDLDGQLVMKIEVAK----PAKAWFPLKMGAANYCAFRGMLM 191
Query 178 E--IPWEMKVSGLRARLGGARLRLGDHPYAKELASLGLPKRALLS 220
+ I ++ K+ + G A+L +GDHP + L L + + +
Sbjct 192 KSVIYFQGKLGFSLFKPGSAKLTIGDHPRIQSLKHLEISPEPIFT 236
>gi|167590414|ref|ZP_02382802.1| hypothetical protein BuboB_34072 [Burkholderia ubonensis Bu]
Length=290
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 57/216 (27%), Positives = 92/216 (43%), Gaps = 27/216 (12%)
Query 15 MPVRIRTANLHSAMFSVPADPAQRLIDYSGLRVCEYLPGKAIVMQMLVRYVDGDLGRYHE 74
MPV T+ A+FS+ D A+R+I + + + L + +++ ++ YV ++GRY E
Sbjct 20 MPVASDTSPALMAVFSIDLDAARRVIPGNEVHPFQ-LWRRGLLVVTVIDYVVTNIGRYVE 78
Query 75 YGTAIMVNPPGTQRRGPRALTRAAAF-----IHHLPVDQVFTLEAGRTIWGFPKIMADFN 129
Y AI F + LPV +++ GR IWG PK A+ +
Sbjct 79 YSIAIACTHGRRPPPRLLPGLLMKPFGTGQYVVDLPVSTDISVKGGRGIWGMPKHQANLD 138
Query 130 VTDGRRF-GFDVSADGRLIAGIEF----STGLPVPT-------LGWQMLKTYSHHDGVTR 177
G R+ DG+++ I+ S LPV T ++K+Y + G
Sbjct 139 FVIGERWVSSQYDLDGQMMMRIDVSKPKSAWLPVSTGAVNYCCFRGMLMKSYIYFKG--- 195
Query 178 EIPWEMKVSGLRARLGGARLRLGDHPYAKELASLGL 213
K+ G ARL +GDHP L +L +
Sbjct 196 ------KLGFSLFTPGSARLFIGDHPRMAWLNTLDI 225
>gi|344210374|ref|YP_004794694.1| putative acetoacetate decarboxylase [Haloarcula hispanica ATCC
33960]
gi|343781729|gb|AEM55706.1| putative acetoacetate decarboxylase [Haloarcula hispanica ATCC
33960]
Length=247
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 68/243 (28%), Positives = 106/243 (44%), Gaps = 31/243 (12%)
Query 10 GTVLTMPVRIRTANLHSAMFSVPADPAQRLIDYSGLRVCEYLPGKAIVMQMLVRY---VD 66
G +T+P+ + A + A+ D A+ L+ GL +A V+ + V Y D
Sbjct 18 GHEVTLPL-VTEATVAGAVLPARYDVAESLLP-DGLAPVRATARRAAVVLLCVEYHRIGD 75
Query 67 GDLGRYHEYGTAIMVNPPGTQRRGPRA--LTR-AAAFIHHLPVDQVFTLEAGRTIWGFPK 123
+ Y E+ A++++ RR P LTR ++ LPV G IWG+PK
Sbjct 76 DAMAPYDEF--AVLISATADGRRPPLLPLLTRNVGGYVWSLPVTTEPACALGDEIWGYPK 133
Query 124 IMADF-NVTDGRRFGFDVSADGRLIAGIEFSTGLPVPTLGW---QMLKTYSHHDGVTREI 179
+AD + D R V DG +A + G+ P W + +++Y+ +G
Sbjct 134 TVADITHRDDATRRETTVVEDGNRVATV----GIDWPRT-WERRETVESYAVREGQLERT 188
Query 180 PWEMKVSGLRARLGGARLR------LGDHPYAKELASLGLPKRALLSQSAANVEMTFGDG 233
P E + +LG A L LGDH A L SL L R++L S +T+G G
Sbjct 189 PIEFQ-----GKLGAAPLSNRVDVDLGDHERADTLRSLDLGSRSVLRFSLEG-RITYGAG 242
Query 234 HPI 236
P+
Sbjct 243 RPV 245
>gi|343928529|ref|ZP_08767976.1| hypothetical protein GOALK_118_00200 [Gordonia alkanivorans NBRC
16433]
gi|343761540|dbj|GAA14902.1| hypothetical protein GOALK_118_00200 [Gordonia alkanivorans NBRC
16433]
Length=232
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/185 (26%), Positives = 79/185 (43%), Gaps = 24/185 (12%)
Query 52 PGKAIVMQMLVRYVDGDLGRYHEYGTAIMVNPPGTQRRGPR-----------ALTRAAAF 100
PG+A+ + ++ Y++ + Y E+ +I V RR R A +R+ +
Sbjct 5 PGRALAIIQIMEYLEKSIEPYREFTVSIPV------RRDSRVALPFYDLAGWARSRSGIY 58
Query 101 IHHLPVDQVFTLEAGRTIWGFPKIMADFNV-TDGRRFGFDVSADGRLIAGIEFSTGLPVP 159
I H+ VD GR + GFPK+++D + +V+ G + +
Sbjct 59 ITHIGVDNHQAQIVGREVLGFPKVLSDVQFHSTPTSHSAEVTVGGASVLTLSVRRAAE-R 117
Query 160 TLGWQMLKTYSHH----DGVTREIPWEMKVS-GLRARLGGARLRLGDHPYAKELASLGLP 214
L + L Y H D IP++ + S G ARL LGDHP A+E+ L +
Sbjct 118 RLASRQLDFYCHSLSPIDNKVLYIPYQSESSAGFALGTRSARLHLGDHPIAREIRDLDIA 177
Query 215 KRALL 219
AL+
Sbjct 178 NGALI 182
>gi|83643854|ref|YP_432289.1| hypothetical protein HCH_00977 [Hahella chejuensis KCTC 2396]
gi|83631897|gb|ABC27864.1| conserved hypothetical protein [Hahella chejuensis KCTC 2396]
Length=257
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/220 (26%), Positives = 87/220 (40%), Gaps = 16/220 (7%)
Query 11 TVLTMPVRIRTANLHSAMFSVPADPAQRLIDYSGLRVCEYLPGKAIVMQMLVRYVDGDLG 70
+ L+ + R + +A F V + A L+ SGL+ L +V+ + + +G
Sbjct 20 SALSASINYRDSACINAFFPVSVEAATSLLKGSGLKPAFALGSHTLVVVSIYEHKRCAIG 79
Query 71 RYHEYGTAIMVNPPGTQRRGPRALT--------RAAAFIHHLPVDQVFTLEAGRTIWGFP 122
+ E G I V P G L R F LPV L GR +WG P
Sbjct 80 AHKEAGLVIPVLPEGESLPLSNVLDLYLPINQRRIGFFPLDLPVTSESALSTGRELWGLP 139
Query 123 KIMADFNVTDGRR-FGFDVSADGRLIAGIEFST--GLPVPTLGWQMLKTYSHHDGVTREI 179
+ A+ + RR V +DG + + T G+PV + + H T+
Sbjct 140 RFPAEITLASQRRQIHAQVRSDGETLFTLTGETLPGIPVIPVNLLIYTQVERHLTKTK-- 197
Query 180 PWEMKVSGLRARLGGARLRLG--DHPYAKELASLGLPKRA 217
+K G G RL +G DHP + L LGL +++
Sbjct 198 -VRLKGFGKLYPAGTVRLTVGETDHPMTEHLTRLGLDEKS 236
>gi|115372588|ref|ZP_01459895.1| conserved hypothetical protein [Stigmatella aurantiaca DW4/3-1]
gi|310823859|ref|YP_003956217.1| hypothetical protein STAUR_6633 [Stigmatella aurantiaca DW4/3-1]
gi|115370309|gb|EAU69237.1| conserved hypothetical protein [Stigmatella aurantiaca DW4/3-1]
gi|309396931|gb|ADO74390.1| conserved uncharacterized protein [Stigmatella aurantiaca DW4/3-1]
Length=301
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/229 (25%), Positives = 84/229 (37%), Gaps = 24/229 (10%)
Query 8 IAGTVLTMPVRIRTANLHSAMFSVPADPAQRLIDYSGLRVCEYLPGKAIVMQMLVRYVDG 67
+ G +P+ R + A F++ A A + + + K ++ ++ Y D
Sbjct 18 VDGIPYELPINSRASPALMAAFTLDARKAAAWMPGNEVHPLRLWGNKGVLFITVIDYRDT 77
Query 68 DLGRYHEYGTAIMVNPPGTQRRGPRALTRAAAFIHH---------LPVDQVFTLEAGRTI 118
D+G Y E+ AI T R P F H LPV +++ G+ I
Sbjct 78 DIGPYIEFSVAIAC----THGRRPAPPLLPLLFQRHHGLGQYVVDLPVSTEISVKGGKGI 133
Query 119 WGFPKIMADFNV-TDGRRFGFDVSADGRLIAGIEFS----TGLPVPTLGWQMLKTYSHHD 173
WG PK A+ + DG DG+L IE T LP+ Y
Sbjct 134 WGMPKHQANLDFRIDGSTVSSQYDKDGQLAVRIEIDRPRRTWLPIRASA----ANYCQFR 189
Query 174 G--VTREIPWEMKVSGLRARLGGARLRLGDHPYAKELASLGLPKRALLS 220
G + I + K ARL LG HP + L LG+ + +
Sbjct 190 GMLMKSSIYFRGKFGFCFGSKASARLTLGSHPRVQPLKDLGIASKPFFT 238
>gi|332669810|ref|YP_004452818.1| hypothetical protein Celf_1296 [Cellulomonas fimi ATCC 484]
gi|332338848|gb|AEE45431.1| hypothetical protein Celf_1296 [Cellulomonas fimi ATCC 484]
Length=328
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 62/220 (29%), Positives = 90/220 (41%), Gaps = 19/220 (8%)
Query 15 MPVRIRTANLHSAMFSVPADPAQRLIDYSGLRVCEYLPGKAIVMQMLVRYVDGDLGRYHE 74
MPV + + A F + A+ ++ L G+ +++ +V Y D+G+Y E
Sbjct 40 MPVSSEDSPVLMAAFPISLAAARAVLPGRELHPVSLGFGRGVLLATVVNYRSTDIGQYIE 99
Query 75 YGTAIMVNPPGTQRRGPRALTRAAAFIH------HLPVDQVFTLEAGRTIWGFPKIMA-- 126
Y AI V G + P +H LPV +++ G+ IWG PK A
Sbjct 100 YSLAIAVT-HGPRPAPPLLPMLLMRTLHLGQYVVDLPVSTEVSVKGGKGIWGMPKHQASL 158
Query 127 DFNVTDGRRFGFDVSADGRLIAGIEFS----TGLPVPTLGWQMLKTYSHHDGVTREIPWE 182
DF VTD + DGR A +E TGLP+ Y G
Sbjct 159 DFVVTDETVSAQYDTLDGRFGALVEIERPAPTGLPLKLAA----ANYCAFRGQLMRSTIY 214
Query 183 MKVSGLRARLGGARLR--LGDHPYAKELASLGLPKRALLS 220
+ +G A GAR R LGD P + L +LG+ R L +
Sbjct 215 FEATGDVAVGPGARARIVLGDAPGVQPLHALGIGDRPLFT 254
>gi|304310458|ref|YP_003810056.1| hypothetical protein HDN1F_08140 [gamma proteobacterium HdN1]
gi|301796191|emb|CBL44397.1| conserved hypothetical protein [gamma proteobacterium HdN1]
Length=259
Score = 51.6 bits (122), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 60/220 (28%), Positives = 85/220 (39%), Gaps = 27/220 (12%)
Query 15 MPVRIRTANLHSAMFSVPADPAQRLIDYSGLRVCEYLPGKAIVMQMLVRYVDGDLGRYHE 74
+P+ A A F V RL+ +GL + +++V Y + +G Y+E
Sbjct 22 LPILYYDATAVYAFFLVNTANVDRLLAGTGLVSALRVGQRSLVAVACYEYRNTTVGVYNE 81
Query 75 YGTAIMVNPPGTQRRGP-----------RALTRAAA-----FIHHLPVDQVFTLEAGRTI 118
G A T R G R ++R ++ LPV AGR I
Sbjct 82 VGIAA-----ATARHGESLTLGGWPDMLRTISRPEVRQHGMYVLDLPVTTPKANAAGREI 136
Query 119 WGFPKIMADFNV-TDGRRFGFDVS--ADGRLIAGIEFSTGLPVPTLGWQMLKTYSHHDGV 175
WG PK + DGR F V G I ++ GL VP + + L +S H G
Sbjct 137 WGLPKFVTPIPFRLDGRDFTCQVDDPNGGSPIMCLDGQMGLSVPAMPFS-LTLFSRHQGH 195
Query 176 TREIPWEMKVSGLRARLGGARLRLGD--HPYAKELASLGL 213
+ A G RL++GD HP A+ L LGL
Sbjct 196 MLRTIVNARGKSWLAAPGSVRLQVGDSSHPMAQRLRELGL 235
Lambda K H
0.323 0.139 0.430
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 319551017258
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40