BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv3527 Length=149 Score E Sequences producing significant alignments: (Bits) Value gi|15610663|ref|NP_218044.1| hypothetical protein Rv3527 [Mycoba... 307 4e-82 gi|298527005|ref|ZP_07014414.1| conserved hypothetical protein [... 305 1e-81 gi|340628491|ref|YP_004746943.1| hypothetical protein MCAN_35381... 298 2e-79 gi|183984984|ref|YP_001853275.1| hypothetical protein MMAR_5016 ... 229 1e-58 gi|118619275|ref|YP_907607.1| hypothetical protein MUL_4090 [Myc... 228 3e-58 gi|254822611|ref|ZP_05227612.1| hypothetical protein MintA_21959... 228 3e-58 gi|240172362|ref|ZP_04751021.1| hypothetical protein MkanA1_2380... 216 1e-54 gi|118464889|ref|YP_879912.1| hypothetical protein MAV_0632 [Myc... 214 5e-54 gi|254773589|ref|ZP_05215105.1| hypothetical protein MaviaA2_027... 213 7e-54 gi|296166558|ref|ZP_06848988.1| conserved hypothetical protein [... 209 8e-53 gi|41406636|ref|NP_959472.1| hypothetical protein MAP0538c [Myco... 209 8e-53 gi|118473815|ref|YP_890152.1| hypothetical protein MSMEG_5927 [M... 185 2e-45 gi|120406174|ref|YP_956003.1| hypothetical protein Mvan_5226 [My... 181 3e-44 gi|342862261|ref|ZP_08718903.1| hypothetical protein MCOL_25346 ... 180 6e-44 gi|315442563|ref|YP_004075442.1| hypothetical protein Mspyr1_091... 177 4e-43 gi|145222124|ref|YP_001132802.1| hypothetical protein Mflv_1532 ... 177 5e-43 gi|126437587|ref|YP_001073278.1| hypothetical protein Mjls_5023 ... 163 6e-39 gi|108801604|ref|YP_641801.1| hypothetical protein Mmcs_4641 [My... 163 7e-39 gi|169631252|ref|YP_001704901.1| hypothetical protein MAB_4174 [... 150 6e-35 gi|336458425|gb|EGO37399.1| hypothetical protein MAPs_13200 [Myc... 142 2e-32 gi|333992309|ref|YP_004524923.1| hypothetical protein JDM601_366... 133 8e-30 gi|326384578|ref|ZP_08206257.1| hypothetical protein SCNU_16638 ... 108 3e-22 gi|262200915|ref|YP_003272123.1| hypothetical protein Gbro_0918 ... 107 6e-22 gi|343925869|ref|ZP_08765384.1| hypothetical protein GOALK_050_0... 94.7 4e-18 gi|312138144|ref|YP_004005480.1| hypothetical protein REQ_06780 ... 86.7 1e-15 gi|111021509|ref|YP_704481.1| hypothetical protein RHA1_ro04537 ... 85.5 2e-15 gi|226363862|ref|YP_002781644.1| hypothetical protein ROP_44520 ... 84.3 5e-15 gi|229494182|ref|ZP_04387945.1| conserved hypothetical protein [... 83.2 1e-14 gi|54022440|ref|YP_116682.1| hypothetical protein nfa4760 [Nocar... 83.2 1e-14 gi|226304242|ref|YP_002764200.1| hypothetical protein RER_07530 ... 82.0 2e-14 gi|319948617|ref|ZP_08022741.1| hypothetical protein ES5_04523 [... 74.7 4e-12 gi|302525660|ref|ZP_07278002.1| conserved hypothetical protein [... 69.3 2e-10 gi|324106152|gb|ADY18319.1| putative ferredoxin [Rhodococcus rho... 69.3 2e-10 gi|333918592|ref|YP_004492173.1| hypothetical protein AS9A_0921 ... 68.2 4e-10 gi|300784424|ref|YP_003764715.1| hypothetical protein AMED_2518 ... 61.6 4e-08 gi|325674651|ref|ZP_08154338.1| hypothetical protein HMPREF0724_... 59.3 2e-07 gi|312138357|ref|YP_004005693.1| hypothetical protein REQ_08970 ... 57.8 6e-07 gi|145595198|ref|YP_001159495.1| hypothetical protein Strop_2673... 54.7 5e-06 gi|296141521|ref|YP_003648764.1| hypothetical protein Tpau_3850 ... 53.5 1e-05 gi|159038445|ref|YP_001537698.1| hypothetical protein Sare_2881 ... 52.0 3e-05 gi|311744216|ref|ZP_07718020.1| conserved hypothetical protein [... 52.0 3e-05 gi|54024211|ref|YP_118453.1| hypothetical protein nfa22420 [Noca... 50.1 1e-04 gi|254818664|ref|ZP_05223665.1| hypothetical protein MintA_02009... 48.9 2e-04 gi|342860667|ref|ZP_08717317.1| hypothetical protein MCOL_17388 ... 47.4 7e-04 gi|343924797|ref|ZP_08764336.1| hypothetical protein GOALK_026_0... 47.0 0.001 gi|324106142|gb|ADY18311.1| putative ferredoxin [Rhodococcus rho... 46.6 0.001 gi|326331640|ref|ZP_08197928.1| hypothetical protein NBCG_03079 ... 46.6 0.001 gi|119716745|ref|YP_923710.1| hypothetical protein Noca_2519 [No... 46.6 0.001 gi|145225143|ref|YP_001135821.1| hypothetical protein Mflv_4565 ... 46.2 0.002 gi|226361623|ref|YP_002779401.1| hypothetical protein ROP_22090 ... 45.8 0.002 >gi|15610663|ref|NP_218044.1| hypothetical protein Rv3527 [Mycobacterium tuberculosis H37Rv] gi|15843137|ref|NP_338174.1| hypothetical protein MT3627 [Mycobacterium tuberculosis CDC1551] gi|31794703|ref|NP_857196.1| hypothetical protein Mb3557 [Mycobacterium bovis AF2122/97] 76 more sequence titles Length=149 Score = 307 bits (786), Expect = 4e-82, Method: Compositional matrix adjust. Identities = 149/149 (100%), Positives = 149/149 (100%), Gaps = 0/149 (0%) Query 1 MPDDQPAVPDVDRLARSMLLLHGDHHDHNDSPEQHRTCGSWSKSRDFADDPQRAAAVREA 60 MPDDQPAVPDVDRLARSMLLLHGDHHDHNDSPEQHRTCGSWSKSRDFADDPQRAAAVREA Sbjct 1 MPDDQPAVPDVDRLARSMLLLHGDHHDHNDSPEQHRTCGSWSKSRDFADDPQRAAAVREA 60 Query 61 SRAERDRYLTSGLQPVDCRFCHVTVTVKRLGPGHTAVQWNTEASRRCAYFTELRARGGDS 120 SRAERDRYLTSGLQPVDCRFCHVTVTVKRLGPGHTAVQWNTEASRRCAYFTELRARGGDS Sbjct 61 SRAERDRYLTSGLQPVDCRFCHVTVTVKRLGPGHTAVQWNTEASRRCAYFTELRARGGDS 120 Query 121 ARTRSCPRLTDSIEHAVAEGYLEHHDPNR 149 ARTRSCPRLTDSIEHAVAEGYLEHHDPNR Sbjct 121 ARTRSCPRLTDSIEHAVAEGYLEHHDPNR 149 >gi|298527005|ref|ZP_07014414.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A] gi|298496799|gb|EFI32093.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A] Length=149 Score = 305 bits (782), Expect = 1e-81, Method: Compositional matrix adjust. Identities = 148/149 (99%), Positives = 149/149 (100%), Gaps = 0/149 (0%) Query 1 MPDDQPAVPDVDRLARSMLLLHGDHHDHNDSPEQHRTCGSWSKSRDFADDPQRAAAVREA 60 MPDDQPAVPDVDRLARSMLLLHGDHHDHNDSPEQHRTCGSWSKSRDFADDPQRAAAVREA Sbjct 1 MPDDQPAVPDVDRLARSMLLLHGDHHDHNDSPEQHRTCGSWSKSRDFADDPQRAAAVREA 60 Query 61 SRAERDRYLTSGLQPVDCRFCHVTVTVKRLGPGHTAVQWNTEASRRCAYFTELRARGGDS 120 SRAERDRYLTSGLQPVDCRFCHVTVTVKRLGPGHTAVQWNTEASRRCAYFTELRARGGDS Sbjct 61 SRAERDRYLTSGLQPVDCRFCHVTVTVKRLGPGHTAVQWNTEASRRCAYFTELRARGGDS 120 Query 121 ARTRSCPRLTDSIEHAVAEGYLEHHDPNR 149 ARTRSCPRLTDSIEHAVAEGYL+HHDPNR Sbjct 121 ARTRSCPRLTDSIEHAVAEGYLKHHDPNR 149 >gi|340628491|ref|YP_004746943.1| hypothetical protein MCAN_35381 [Mycobacterium canettii CIPT 140010059] gi|340006681|emb|CCC45869.1| hypothetical protein MCAN_35381 [Mycobacterium canettii CIPT 140010059] Length=149 Score = 298 bits (762), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 145/149 (98%), Positives = 146/149 (98%), Gaps = 0/149 (0%) Query 1 MPDDQPAVPDVDRLARSMLLLHGDHHDHNDSPEQHRTCGSWSKSRDFADDPQRAAAVREA 60 MPDDQPAVPDVDRLAR MLLLHGDHHDHNDSPEQHRTCGSWSKSRDFADDPQRAAAVREA Sbjct 1 MPDDQPAVPDVDRLARLMLLLHGDHHDHNDSPEQHRTCGSWSKSRDFADDPQRAAAVREA 60 Query 61 SRAERDRYLTSGLQPVDCRFCHVTVTVKRLGPGHTAVQWNTEASRRCAYFTELRARGGDS 120 SRAERDRYLTSGLQPVDCR CHVTVTVKRLGPGHTAVQWNTEASRRCAYFTELRARGGDS Sbjct 61 SRAERDRYLTSGLQPVDCRCCHVTVTVKRLGPGHTAVQWNTEASRRCAYFTELRARGGDS 120 Query 121 ARTRSCPRLTDSIEHAVAEGYLEHHDPNR 149 ARTR+CPRL DSIEHAVAEGYLEHHDPNR Sbjct 121 ARTRACPRLADSIEHAVAEGYLEHHDPNR 149 >gi|183984984|ref|YP_001853275.1| hypothetical protein MMAR_5016 [Mycobacterium marinum M] gi|183178310|gb|ACC43420.1| conserved hypothetical protein [Mycobacterium marinum M] Length=149 Score = 229 bits (583), Expect = 1e-58, Method: Compositional matrix adjust. Identities = 108/147 (74%), Positives = 128/147 (88%), Gaps = 1/147 (0%) Query 2 PDDQPAVPDVDRLARSMLLLHGDHHDHNDSPEQHRTCGSWSKSRDFADDPQRAAAVREAS 61 PDDQ VPDVD+LARSMLLL GDHHDH +S EQH WSKSRDF +DPQR AAVR+AS Sbjct 4 PDDQ-EVPDVDQLARSMLLLLGDHHDHQESSEQHHGPQPWSKSRDFTNDPQRGAAVRQAS 62 Query 62 RAERDRYLTSGLQPVDCRFCHVTVTVKRLGPGHTAVQWNTEASRRCAYFTELRARGGDSA 121 A+R+RYLT+GLQPVDCRFCHVTVTVK+LGPGHTAVQWNTEA++RCA+F E+R GGD+A Sbjct 63 LADRERYLTAGLQPVDCRFCHVTVTVKQLGPGHTAVQWNTEAAQRCAHFAEVRRSGGDTA 122 Query 122 RTRSCPRLTDSIEHAVAEGYLEHHDPN 148 RT++CP++TDSI+HA+AEG L HDP+ Sbjct 123 RTKACPKMTDSIQHAIAEGVLVQHDPD 149 >gi|118619275|ref|YP_907607.1| hypothetical protein MUL_4090 [Mycobacterium ulcerans Agy99] gi|118571385|gb|ABL06136.1| conserved hypothetical protein [Mycobacterium ulcerans Agy99] Length=149 Score = 228 bits (580), Expect = 3e-58, Method: Compositional matrix adjust. Identities = 107/147 (73%), Positives = 128/147 (88%), Gaps = 1/147 (0%) Query 2 PDDQPAVPDVDRLARSMLLLHGDHHDHNDSPEQHRTCGSWSKSRDFADDPQRAAAVREAS 61 PDDQ VPDVD+LARSMLLL GDHHDH +S EQH WSKSRDF +DPQR AAVR+AS Sbjct 4 PDDQ-EVPDVDQLARSMLLLLGDHHDHQESSEQHHGRQPWSKSRDFTNDPQRGAAVRQAS 62 Query 62 RAERDRYLTSGLQPVDCRFCHVTVTVKRLGPGHTAVQWNTEASRRCAYFTELRARGGDSA 121 A+R+RYLT+GLQPVDCRFCHVTVTVK+LGPGHTAVQWNTEA++RCA+F E+R GGD+A Sbjct 63 LADRERYLTAGLQPVDCRFCHVTVTVKQLGPGHTAVQWNTEAAQRCAHFAEVRRSGGDTA 122 Query 122 RTRSCPRLTDSIEHAVAEGYLEHHDPN 148 RT++CP++TDSI+HA+AEG + HDP+ Sbjct 123 RTKACPKMTDSIQHAIAEGVVVQHDPD 149 >gi|254822611|ref|ZP_05227612.1| hypothetical protein MintA_21959 [Mycobacterium intracellulare ATCC 13950] Length=150 Score = 228 bits (580), Expect = 3e-58, Method: Compositional matrix adjust. Identities = 112/144 (78%), Positives = 124/144 (87%), Gaps = 1/144 (0%) Query 1 MPDDQPAVPDVDRLARSMLLLHGDHHDHNDSPEQHRTCG-SWSKSRDFADDPQRAAAVRE 59 M DDQP VPDVDRLARSML LHGDHHDH + P + SWSKSRDFA+DPQRAA V E Sbjct 1 MADDQPQVPDVDRLARSMLQLHGDHHDHEEKPAGNGGGSRSWSKSRDFANDPQRAATVAE 60 Query 60 ASRAERDRYLTSGLQPVDCRFCHVTVTVKRLGPGHTAVQWNTEASRRCAYFTELRARGGD 119 ASRA+R+RYL SGL PVDCRFCHV VTV+RLGPGHTAVQWNTEA +RCA+FTE+R GGD Sbjct 61 ASRADRERYLNSGLLPVDCRFCHVRVTVRRLGPGHTAVQWNTEAWQRCAHFTEVRESGGD 120 Query 120 SARTRSCPRLTDSIEHAVAEGYLE 143 +ARTRSCP+L+DSIEHAVAEGYLE Sbjct 121 TARTRSCPKLSDSIEHAVAEGYLE 144 >gi|240172362|ref|ZP_04751021.1| hypothetical protein MkanA1_23808 [Mycobacterium kansasii ATCC 12478] Length=149 Score = 216 bits (549), Expect = 1e-54, Method: Compositional matrix adjust. Identities = 108/147 (74%), Positives = 126/147 (86%), Gaps = 3/147 (2%) Query 2 PDDQPAVPDVDRLARSMLLLHGDHHDHNDSPEQHRTCGSWSKSRDFADDPQRAAAVREAS 61 PDDQ VPDVDRLARSMLLL G HHDH + ++H S SK+ DFA+DPQRAAAVREAS Sbjct 4 PDDQQ-VPDVDRLARSMLLLRGGHHDHRVASDEHAARRSSSKAWDFANDPQRAAAVREAS 62 Query 62 RAERDRYLTSGLQPVDCRFCHVTVTVKRLGPGHTAVQWNTEASRRCAYFTELRARGGDSA 121 RA+R+RYLT GLQPVDCRFCHVTVTVKR GPGHTAVQWNTEA +RCA+F E+RA GGD+A Sbjct 63 RADRERYLTGGLQPVDCRFCHVTVTVKRHGPGHTAVQWNTEAVQRCAHFAEVRASGGDTA 122 Query 122 RTRSCPRLTDSIEHAVAEGYL--EHHD 146 RT++CP+++DSI+HA+AEGYL EH D Sbjct 123 RTKACPKMSDSIDHAIAEGYLTEEHQD 149 >gi|118464889|ref|YP_879912.1| hypothetical protein MAV_0632 [Mycobacterium avium 104] gi|118166176|gb|ABK67073.1| conserved hypothetical protein [Mycobacterium avium 104] Length=145 Score = 214 bits (544), Expect = 5e-54, Method: Compositional matrix adjust. Identities = 113/144 (79%), Positives = 124/144 (87%), Gaps = 1/144 (0%) Query 1 MPDDQPAVPDVDRLARSMLLLHGDHHDHNDSPEQH-RTCGSWSKSRDFADDPQRAAAVRE 59 M DDQPAVPDVDRLARSMLLLHGDHHDH++ P GSWSKSRDF DDPQRAAAV E Sbjct 1 MTDDQPAVPDVDRLARSMLLLHGDHHDHDERPAASPANGGSWSKSRDFTDDPQRAAAVAE 60 Query 60 ASRAERDRYLTSGLQPVDCRFCHVTVTVKRLGPGHTAVQWNTEASRRCAYFTELRARGGD 119 ASRA+R+RYL SGL PVDCRFCH V V+RLGPGHTAVQWNTEA +RCAYFTE+R GGD Sbjct 61 ASRADRERYLNSGLLPVDCRFCHARVAVRRLGPGHTAVQWNTEAWQRCAYFTEVRQAGGD 120 Query 120 SARTRSCPRLTDSIEHAVAEGYLE 143 +ART+SCP+L DSIEHAVAEGYL+ Sbjct 121 TARTKSCPKLGDSIEHAVAEGYLD 144 >gi|254773589|ref|ZP_05215105.1| hypothetical protein MaviaA2_02780 [Mycobacterium avium subsp. avium ATCC 25291] Length=145 Score = 213 bits (542), Expect = 7e-54, Method: Compositional matrix adjust. Identities = 113/144 (79%), Positives = 124/144 (87%), Gaps = 1/144 (0%) Query 1 MPDDQPAVPDVDRLARSMLLLHGDHHDHNDSPEQH-RTCGSWSKSRDFADDPQRAAAVRE 59 M DDQPAVPDVDRLARSMLLLHGDHHDH++ P GSWSKSRDF DDPQRAAAV E Sbjct 1 MTDDQPAVPDVDRLARSMLLLHGDHHDHDERPAASPANGGSWSKSRDFTDDPQRAAAVAE 60 Query 60 ASRAERDRYLTSGLQPVDCRFCHVTVTVKRLGPGHTAVQWNTEASRRCAYFTELRARGGD 119 ASRA+R+RYL SGL PVDCRFCH V V+RLGPGHTAVQWNTEA +RCAYFTE+R GGD Sbjct 61 ASRADRERYLNSGLLPVDCRFCHARVAVRRLGPGHTAVQWNTEAWQRCAYFTEVRRAGGD 120 Query 120 SARTRSCPRLTDSIEHAVAEGYLE 143 +ART+SCP+L DSIEHAVAEGYL+ Sbjct 121 TARTKSCPKLGDSIEHAVAEGYLD 144 >gi|296166558|ref|ZP_06848988.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295898044|gb|EFG77620.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length=155 Score = 209 bits (533), Expect = 8e-53, Method: Compositional matrix adjust. Identities = 113/147 (77%), Positives = 126/147 (86%), Gaps = 5/147 (3%) Query 1 MPDDQPAVPDVDRLARSMLLLHGDHHDHNDSPEQHRTCGSW-----SKSRDFADDPQRAA 55 MPDDQPAVPDVDRLARSMLLLHGD HDH++ P G SKSRDF++DPQRAA Sbjct 1 MPDDQPAVPDVDRLARSMLLLHGDGHDHDERPSSSDGNGGARAGLASKSRDFSNDPQRAA 60 Query 56 AVREASRAERDRYLTSGLQPVDCRFCHVTVTVKRLGPGHTAVQWNTEASRRCAYFTELRA 115 AV EASRA+R+RYL+SGL PVDCRFCHVTVTV+RLGPGHTAVQWNTEA +RCA+FTE+R Sbjct 61 AVAEASRADRERYLSSGLLPVDCRFCHVTVTVRRLGPGHTAVQWNTEAWQRCAHFTEVRN 120 Query 116 RGGDSARTRSCPRLTDSIEHAVAEGYL 142 GGD+AR RSCP+LTDSIEHAVAEGYL Sbjct 121 SGGDTARIRSCPKLTDSIEHAVAEGYL 147 >gi|41406636|ref|NP_959472.1| hypothetical protein MAP0538c [Mycobacterium avium subsp. paratuberculosis K-10] gi|41394985|gb|AAS02855.1| hypothetical protein MAP_0538c [Mycobacterium avium subsp. paratuberculosis K-10] Length=145 Score = 209 bits (533), Expect = 8e-53, Method: Compositional matrix adjust. Identities = 111/144 (78%), Positives = 124/144 (87%), Gaps = 1/144 (0%) Query 1 MPDDQPAVPDVDRLARSMLLLHGDHHDHNDSPEQH-RTCGSWSKSRDFADDPQRAAAVRE 59 M DDQPAVPDVDRLARSMLLLHGDHHDH++ P GSWSKSRDF DDPQRAAAV E Sbjct 1 MTDDQPAVPDVDRLARSMLLLHGDHHDHDERPAASPANGGSWSKSRDFTDDPQRAAAVAE 60 Query 60 ASRAERDRYLTSGLQPVDCRFCHVTVTVKRLGPGHTAVQWNTEASRRCAYFTELRARGGD 119 ASRA+R+RYL SGL PVDCRFCH V V+RLGPGHTAVQW+TEA +RCAYFTE+R GG+ Sbjct 61 ASRADRERYLNSGLLPVDCRFCHARVAVRRLGPGHTAVQWSTEAWQRCAYFTEVRRAGGN 120 Query 120 SARTRSCPRLTDSIEHAVAEGYLE 143 +ART+SCP+L DSIEHAVAEGYL+ Sbjct 121 TARTKSCPKLGDSIEHAVAEGYLD 144 >gi|118473815|ref|YP_890152.1| hypothetical protein MSMEG_5927 [Mycobacterium smegmatis str. MC2 155] gi|118175102|gb|ABK75998.1| conserved hypothetical protein [Mycobacterium smegmatis str. MC2 155] Length=158 Score = 185 bits (470), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 93/136 (69%), Positives = 105/136 (78%), Gaps = 0/136 (0%) Query 8 VPDVDRLARSMLLLHGDHHDHNDSPEQHRTCGSWSKSRDFADDPQRAAAVREASRAERDR 67 PDV LARSMLLLHG H D + GSWSK+ +FA DPQRAAAVREAS +R+R Sbjct 12 TPDVGDLARSMLLLHGIHDDDDHPAGNQPGTGSWSKAPNFASDPQRAAAVREASLRDRER 71 Query 68 YLTSGLQPVDCRFCHVTVTVKRLGPGHTAVQWNTEASRRCAYFTELRARGGDSARTRSCP 127 YLTSGL VDCR CHV+V VK+LGP HTAVQWN+EA++RCA F E+RA GGD ART SCP Sbjct 72 YLTSGLVSVDCRHCHVSVQVKKLGPTHTAVQWNSEATQRCAVFNEIRAAGGDPARTPSCP 131 Query 128 RLTDSIEHAVAEGYLE 143 RL+DSI HAVAEG LE Sbjct 132 RLSDSIRHAVAEGVLE 147 >gi|120406174|ref|YP_956003.1| hypothetical protein Mvan_5226 [Mycobacterium vanbaalenii PYR-1] gi|119958992|gb|ABM15997.1| conserved hypothetical protein [Mycobacterium vanbaalenii PYR-1] Length=152 Score = 181 bits (459), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 91/141 (65%), Positives = 109/141 (78%), Gaps = 4/141 (2%) Query 8 VPDVDRLARSMLLLHG---DHHDHNDSPEQHRTCGSWSKSRDFADDPQRAAAVREASRAE 64 PDVDRLARSMLLLHG + H+H +P GSW K+ DFA DP RAAAVRE +R + Sbjct 4 APDVDRLARSMLLLHGHDDEEHEHGHTPAGDGP-GSWRKAPDFASDPDRAAAVREGTRRD 62 Query 65 RDRYLTSGLQPVDCRFCHVTVTVKRLGPGHTAVQWNTEASRRCAYFTELRARGGDSARTR 124 R+RYLT+GL VDCRFCHV+V VK+LGP HT+VQW ++A++RCA+F E+R GGD AR R Sbjct 63 RERYLTAGLASVDCRFCHVSVQVKKLGPAHTSVQWTSDATQRCAHFAEIREAGGDPARER 122 Query 125 SCPRLTDSIEHAVAEGYLEHH 145 SCPRLTDSI HAVAEG LE + Sbjct 123 SCPRLTDSIRHAVAEGCLEEY 143 >gi|342862261|ref|ZP_08718903.1| hypothetical protein MCOL_25346 [Mycobacterium colombiense CECT 3035] gi|342130339|gb|EGT83659.1| hypothetical protein MCOL_25346 [Mycobacterium colombiense CECT 3035] Length=149 Score = 180 bits (457), Expect = 6e-44, Method: Compositional matrix adjust. Identities = 115/145 (80%), Positives = 128/145 (89%), Gaps = 0/145 (0%) Query 1 MPDDQPAVPDVDRLARSMLLLHGDHHDHNDSPEQHRTCGSWSKSRDFADDPQRAAAVREA 60 M DDQP VPDVD+LARSMLLLHGDHHDH+D P GSWSKSRDFA+DPQRAAAV EA Sbjct 1 MADDQPKVPDVDQLARSMLLLHGDHHDHDDKPVAGGGSGSWSKSRDFANDPQRAAAVAEA 60 Query 61 SRAERDRYLTSGLQPVDCRFCHVTVTVKRLGPGHTAVQWNTEASRRCAYFTELRARGGDS 120 SRA+R+RYL+SGL PVDCRFCHV VTV+RLGPGHTAVQWNTEA +RCAYFTE+R GGD+ Sbjct 61 SRADRERYLSSGLLPVDCRFCHVRVTVRRLGPGHTAVQWNTEAWQRCAYFTEVRESGGDT 120 Query 121 ARTRSCPRLTDSIEHAVAEGYLEHH 145 ART+SCP+L DSIEHAVAEGYL+H Sbjct 121 ARTKSCPKLGDSIEHAVAEGYLDHQ 145 >gi|315442563|ref|YP_004075442.1| hypothetical protein Mspyr1_09160 [Mycobacterium sp. Spyr1] gi|315260866|gb|ADT97607.1| hypothetical protein Mspyr1_09160 [Mycobacterium sp. Spyr1] Length=160 Score = 177 bits (449), Expect = 4e-43, Method: Compositional matrix adjust. Identities = 90/142 (64%), Positives = 107/142 (76%), Gaps = 6/142 (4%) Query 9 PDVDRLARSMLLLHGD-----HHDHNDSPEQHRTCGSWSKSRDFADDPQRAAAVREASRA 63 PDVDRLARSMLLLHG H H +P + R GSW K+ DF DP RAAAVR +S+A Sbjct 5 PDVDRLARSMLLLHGHDDEGHEHGHTPAPAESRP-GSWRKAPDFTSDPDRAAAVRASSQA 63 Query 64 ERDRYLTSGLQPVDCRFCHVTVTVKRLGPGHTAVQWNTEASRRCAYFTELRARGGDSART 123 +R+RYL SGL VDCRFCHV+V VK+LGP HT+VQW +A++RCA+FTE+R GGD AR+ Sbjct 64 DRERYLNSGLASVDCRFCHVSVKVKKLGPAHTSVQWTRDATQRCAHFTEIRDAGGDPARS 123 Query 124 RSCPRLTDSIEHAVAEGYLEHH 145 SCPRL DSI HAVAEG LE + Sbjct 124 PSCPRLADSIRHAVAEGCLEEY 145 >gi|145222124|ref|YP_001132802.1| hypothetical protein Mflv_1532 [Mycobacterium gilvum PYR-GCK] gi|145214610|gb|ABP44014.1| conserved hypothetical protein [Mycobacterium gilvum PYR-GCK] Length=160 Score = 177 bits (449), Expect = 5e-43, Method: Compositional matrix adjust. Identities = 90/142 (64%), Positives = 107/142 (76%), Gaps = 6/142 (4%) Query 9 PDVDRLARSMLLLHGD-----HHDHNDSPEQHRTCGSWSKSRDFADDPQRAAAVREASRA 63 PDVDRLARSMLLLHG H H +P + R GSW K+ DF DP RAAAVR +S+A Sbjct 5 PDVDRLARSMLLLHGHDDEGHEHGHTPAPTESRP-GSWRKAPDFTSDPDRAAAVRASSQA 63 Query 64 ERDRYLTSGLQPVDCRFCHVTVTVKRLGPGHTAVQWNTEASRRCAYFTELRARGGDSART 123 +R+RYL SGL VDCRFCHV+V VK+LGP HT+VQW +A++RCA+FTE+R GGD AR+ Sbjct 64 DRERYLNSGLASVDCRFCHVSVKVKKLGPAHTSVQWTRDATQRCAHFTEIRDAGGDPARS 123 Query 124 RSCPRLTDSIEHAVAEGYLEHH 145 SCPRL DSI HAVAEG LE + Sbjct 124 PSCPRLADSIRHAVAEGCLEEY 145 >gi|126437587|ref|YP_001073278.1| hypothetical protein Mjls_5023 [Mycobacterium sp. JLS] gi|126237387|gb|ABO00788.1| conserved hypothetical protein [Mycobacterium sp. JLS] Length=156 Score = 163 bits (413), Expect = 6e-39, Method: Compositional matrix adjust. Identities = 93/145 (65%), Positives = 112/145 (78%), Gaps = 4/145 (2%) Query 2 PDDQPAVPDVDRLARSMLLLHGDHHDHNDSPEQHRTCG--SWSKSRDFADDPQRAAAVRE 59 P++Q A +VDRLARSMLLLHG H D T G SWSK+ FADD +RAAAVRE Sbjct 4 PEEQDA--EVDRLARSMLLLHGGHDDDGHDHPAPSTGGRKSWSKAPSFADDEERAAAVRE 61 Query 60 ASRAERDRYLTSGLQPVDCRFCHVTVTVKRLGPGHTAVQWNTEASRRCAYFTELRARGGD 119 A+R +R+RYL SGL VDCRFCHV+V VK+LG GHT+VQW++EAS+RCAYF+E+R GG Sbjct 62 ATRRDRERYLNSGLVAVDCRFCHVSVKVKKLGRGHTSVQWSSEASQRCAYFSEVREAGGQ 121 Query 120 SARTRSCPRLTDSIEHAVAEGYLEH 144 ART++CPRL DSI+HAVAEG LE Sbjct 122 PARTKACPRLADSIKHAVAEGCLEE 146 >gi|108801604|ref|YP_641801.1| hypothetical protein Mmcs_4641 [Mycobacterium sp. MCS] gi|119870758|ref|YP_940710.1| hypothetical protein Mkms_4729 [Mycobacterium sp. KMS] gi|108772023|gb|ABG10745.1| conserved hypothetical protein [Mycobacterium sp. MCS] gi|119696847|gb|ABL93920.1| conserved hypothetical protein [Mycobacterium sp. KMS] Length=155 Score = 163 bits (413), Expect = 7e-39, Method: Compositional matrix adjust. Identities = 95/145 (66%), Positives = 115/145 (80%), Gaps = 5/145 (3%) Query 2 PDDQPAVPDVDRLARSMLLLHGDHHDHNDSPEQHRTCG--SWSKSRDFADDPQRAAAVRE 59 P++Q A +VDRLARSMLLLHG H D +D P T G SWSK+ FADD +RAAAVRE Sbjct 4 PEEQDA--EVDRLARSMLLLHGGHDDDHDHPAPS-TGGRKSWSKAPSFADDEERAAAVRE 60 Query 60 ASRAERDRYLTSGLQPVDCRFCHVTVTVKRLGPGHTAVQWNTEASRRCAYFTELRARGGD 119 A+R +R+RYL SGL VDCRFCHV+V VK+LG GHT+VQW++EAS+RCAYF+E+R GG Sbjct 61 ATRRDRERYLNSGLVAVDCRFCHVSVKVKKLGRGHTSVQWSSEASQRCAYFSEVREAGGQ 120 Query 120 SARTRSCPRLTDSIEHAVAEGYLEH 144 ART++CPRL DSI+HAVAEG LE Sbjct 121 PARTKACPRLADSIKHAVAEGCLEE 145 >gi|169631252|ref|YP_001704901.1| hypothetical protein MAB_4174 [Mycobacterium abscessus ATCC 19977] gi|169243219|emb|CAM64247.1| Conserved hypothetical protein [Mycobacterium abscessus] Length=171 Score = 150 bits (379), Expect = 6e-35, Method: Compositional matrix adjust. Identities = 73/137 (54%), Positives = 96/137 (71%), Gaps = 2/137 (1%) Query 9 PDVDRLARSMLLLHGDHHDHN--DSPEQHRTCGSWSKSRDFADDPQRAAAVREASRAERD 66 P V+ LA+SML LHG H + ++ R G WSK+ F DP+RAA + A+ ++ Sbjct 24 PTVEELAQSMLSLHGAHGEDTAHEANAPGRPNGHWSKAPAFEHDPERAARLHAATEGDKQ 83 Query 67 RYLTSGLQPVDCRFCHVTVTVKRLGPGHTAVQWNTEASRRCAYFTELRARGGDSARTRSC 126 RYLTSGLQ VDCRFCH +V VK+LG HTAVQWNT A+ +CA+F ++R G ++AR R C Sbjct 84 RYLTSGLQEVDCRFCHGSVMVKKLGVNHTAVQWNTAATDKCAFFAQMREEGTNTARIRGC 143 Query 127 PRLTDSIEHAVAEGYLE 143 PRL+DSI HA+AEG L+ Sbjct 144 PRLSDSIAHAIAEGCLD 160 >gi|336458425|gb|EGO37399.1| hypothetical protein MAPs_13200 [Mycobacterium avium subsp. paratuberculosis S397] Length=95 Score = 142 bits (357), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 67/90 (75%), Positives = 78/90 (87%), Gaps = 0/90 (0%) Query 54 AAAVREASRAERDRYLTSGLQPVDCRFCHVTVTVKRLGPGHTAVQWNTEASRRCAYFTEL 113 A V EASRA+R+RYL SGL PVDCRFCH V V+RLGPGHTAVQW+TEA +RCAYFTE+ Sbjct 5 ALPVAEASRADRERYLNSGLLPVDCRFCHARVAVRRLGPGHTAVQWSTEAWQRCAYFTEV 64 Query 114 RARGGDSARTRSCPRLTDSIEHAVAEGYLE 143 R GG++ART+SCP+L DSIEHAVAEGYL+ Sbjct 65 RRAGGNTARTKSCPKLGDSIEHAVAEGYLD 94 >gi|333992309|ref|YP_004524923.1| hypothetical protein JDM601_3669 [Mycobacterium sp. JDM601] gi|333488277|gb|AEF37669.1| conserved hypothetical protein [Mycobacterium sp. JDM601] Length=158 Score = 133 bits (335), Expect = 8e-30, Method: Compositional matrix adjust. Identities = 70/145 (49%), Positives = 94/145 (65%), Gaps = 2/145 (1%) Query 1 MPDDQPAVPDVDRLARSMLLLHGDHHDHNDSPEQHRTCGSWSKSRD--FADDPQRAAAVR 58 M ++ VP V+ LARSML L+G H DH+D P+ + SR F DP R A+R Sbjct 1 MSPEERGVPAVEDLARSMLALYGPHDDHHDEPDTDDSGPDTRYSRQPLFPVDPARYEAIR 60 Query 59 EASRAERDRYLTSGLQPVDCRFCHVTVTVKRLGPGHTAVQWNTEASRRCAYFTELRARGG 118 A+ + +RYL SGL PV+CR C +V VK+LGPG+T+VQW++E+ +CA+F R G Sbjct 61 AATERDSERYLHSGLVPVECRHCRASVEVKKLGPGYTSVQWSSESLTQCAFFAAEREAGH 120 Query 119 DSARTRSCPRLTDSIEHAVAEGYLE 143 S+R+R CP L SI HAVAEG+LE Sbjct 121 ASSRSRGCPNLAKSIRHAVAEGHLE 145 >gi|326384578|ref|ZP_08206257.1| hypothetical protein SCNU_16638 [Gordonia neofelifaecis NRRL B-59395] gi|326196712|gb|EGD53907.1| hypothetical protein SCNU_16638 [Gordonia neofelifaecis NRRL B-59395] Length=127 Score = 108 bits (270), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 50/116 (44%), Positives = 75/116 (65%), Gaps = 0/116 (0%) Query 33 EQHRTCGSWSKSRDFADDPQRAAAVREASRAERDRYLTSGLQPVDCRFCHVTVTVKRLGP 92 ++ T W+K+ +ADDP R AA+ +A+ +R YLT G+ ++CR CH V VK+ Sbjct 5 DERDTASGWAKAPLWADDPDRVAAIADATARDRRHYLTGGMSEIECRTCHAHVLVKKTSA 64 Query 93 GHTAVQWNTEASRRCAYFTELRARGGDSARTRSCPRLTDSIEHAVAEGYLEHHDPN 148 HT+VQWN +A RC++ E+RA GG++A +CPRL+ SI+H VAEG + P+ Sbjct 65 HHTSVQWNDDALARCSHIGEIRAAGGNAALLPTCPRLSASIDHGVAEGIIPSESPD 120 >gi|262200915|ref|YP_003272123.1| hypothetical protein Gbro_0918 [Gordonia bronchialis DSM 43247] gi|262084262|gb|ACY20230.1| hypothetical protein Gbro_0918 [Gordonia bronchialis DSM 43247] Length=135 Score = 107 bits (267), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 48/108 (45%), Positives = 68/108 (63%), Gaps = 0/108 (0%) Query 41 WSKSRDFADDPQRAAAVREASRAERDRYLTSGLQPVDCRFCHVTVTVKRLGPGHTAVQWN 100 W+K+ DF DDP R AAV +A+ +R+ YL G+ ++CR CH V VK+ P HT+VQWN Sbjct 21 WAKAPDFGDDPGRLAAVHQATARDREHYLRGGMTEIECRSCHACVMVKKTSPFHTSVQWN 80 Query 101 TEASRRCAYFTELRARGGDSARTRSCPRLTDSIEHAVAEGYLEHHDPN 148 +A RC +R GG++A +CPRL+ SI+H V+EG + P Sbjct 81 AQARARCDELERIRREGGNTAMMPTCPRLSASIDHGVSEGIIPSESPE 128 >gi|343925869|ref|ZP_08765384.1| hypothetical protein GOALK_050_01640 [Gordonia alkanivorans NBRC 16433] gi|343764220|dbj|GAA12310.1| hypothetical protein GOALK_050_01640 [Gordonia alkanivorans NBRC 16433] Length=131 Score = 94.7 bits (234), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 48/114 (43%), Positives = 67/114 (59%), Gaps = 7/114 (6%) Query 41 WSKSRDFADDPQRAAAVREASRAERDRYLTSGLQPVDCRFCHVTVTVKRLGPGHTAVQWN 100 W+K+ DF DDP RAA V A++ +R+ YL G++ ++CR CH V VK+ HT+VQWN Sbjct 10 WAKAPDFGDDPDRAARVHAATQRDREHYLQGGMREIECRACHACVLVKKTSTHHTSVQWN 69 Query 101 TEASRRCAYFTELRARGGD-------SARTRSCPRLTDSIEHAVAEGYLEHHDP 147 +A RC ++RA G D A +C RL+ SI+H VAEG + P Sbjct 70 ADARSRCHGLEQMRAGGDDGNGPLLPGAMMPTCVRLSASIDHGVAEGIIPPESP 123 >gi|312138144|ref|YP_004005480.1| hypothetical protein REQ_06780 [Rhodococcus equi 103S] gi|325674951|ref|ZP_08154638.1| hypothetical protein HMPREF0724_12420 [Rhodococcus equi ATCC 33707] gi|311887483|emb|CBH46795.1| hypothetical protein REQ_06780 [Rhodococcus equi 103S] gi|325554537|gb|EGD24212.1| hypothetical protein HMPREF0724_12420 [Rhodococcus equi ATCC 33707] Length=117 Score = 86.7 bits (213), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 43/104 (42%), Positives = 59/104 (57%), Gaps = 3/104 (2%) Query 40 SWSKSRDFADDPQRAAAVREASRAERDRYLTSGLQPVDCRFCHVTVTVKRLGPGHTAVQW 99 +W+K+ +AD P R AVR + ++ YL GLQ V CR C V V++ HT++QW Sbjct 6 TWAKAPSYADSPARVEAVRAQTAVDQHNYLEQGLQEVQCRACGTCVLVQKNSFKHTSIQW 65 Query 100 NTEASRRCAYFTELRARGGDSARTRSCPRLTDSIEHAVAEGYLE 143 + C FT A GG + ++CPRL SI+HAV EG LE Sbjct 66 QGNPAEVCPEFT---AAGGRAGSRQTCPRLLSSIQHAVMEGILE 106 >gi|111021509|ref|YP_704481.1| hypothetical protein RHA1_ro04537 [Rhodococcus jostii RHA1] gi|110821039|gb|ABG96323.1| conserved hypothetical protein [Rhodococcus jostii RHA1] Length=115 Score = 85.5 bits (210), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 40/106 (38%), Positives = 59/106 (56%), Gaps = 0/106 (0%) Query 41 WSKSRDFADDPQRAAAVREASRAERDRYLTSGLQPVDCRFCHVTVTVKRLGPGHTAVQWN 100 W+K+ DFA P R A+ + A++ YL G+ V+CR C V V++ HT+VQW Sbjct 7 WAKAPDFAGQPARLEAIHAQTLADKANYLDDGMNEVECRTCGTCVLVRKNSLKHTSVQWT 66 Query 101 TEASRRCAYFTELRARGGDSARTRSCPRLTDSIEHAVAEGYLEHHD 146 + ++ C F + G +A CPRL DSI HAV EG+++ D Sbjct 67 DDPAKTCPTFRDAVGEGQSTALREGCPRLWDSINHAVMEGFIDVRD 112 >gi|226363862|ref|YP_002781644.1| hypothetical protein ROP_44520 [Rhodococcus opacus B4] gi|226242351|dbj|BAH52699.1| hypothetical protein [Rhodococcus opacus B4] Length=115 Score = 84.3 bits (207), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 40/106 (38%), Positives = 59/106 (56%), Gaps = 0/106 (0%) Query 41 WSKSRDFADDPQRAAAVREASRAERDRYLTSGLQPVDCRFCHVTVTVKRLGPGHTAVQWN 100 W+K+ DFA P R A+ + A++ YL G+ V+CR C V V++ HT+VQW Sbjct 7 WAKAPDFAGQPARLEAIHAQTVADKATYLDDGMNEVECRTCGTCVLVRKNSLEHTSVQWT 66 Query 101 TEASRRCAYFTELRARGGDSARTRSCPRLTDSIEHAVAEGYLEHHD 146 + ++ C F + G +A CPRL DSI HAV EG+++ D Sbjct 67 DDPAKTCPTFRDAVGEGQSTALREGCPRLWDSINHAVMEGFIDVRD 112 >gi|229494182|ref|ZP_04387945.1| conserved hypothetical protein [Rhodococcus erythropolis SK121] gi|229318544|gb|EEN84402.1| conserved hypothetical protein [Rhodococcus erythropolis SK121] Length=123 Score = 83.2 bits (204), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 43/108 (40%), Positives = 60/108 (56%), Gaps = 0/108 (0%) Query 41 WSKSRDFADDPQRAAAVREASRAERDRYLTSGLQPVDCRFCHVTVTVKRLGPGHTAVQWN 100 W+K+ DFA +R A+ + ++ YL SGLQ VDC+ C V V++ HT+VQW Sbjct 14 WAKAPDFAGQTERLEAIAAQTIEDKHEYLDSGLQEVDCKACGACVLVRKNTYKHTSVQWT 73 Query 101 TEASRRCAYFTELRARGGDSARTRSCPRLTDSIEHAVAEGYLEHHDPN 148 ++ + RC F E A G SA CP+L DSI AV +G + DP Sbjct 74 SDPALRCHTFKEAIASGQSSALKDGCPKLHDSIADAVRDGTITVRDPE 121 >gi|54022440|ref|YP_116682.1| hypothetical protein nfa4760 [Nocardia farcinica IFM 10152] gi|54013948|dbj|BAD55318.1| hypothetical protein [Nocardia farcinica IFM 10152] Length=110 Score = 83.2 bits (204), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 40/104 (39%), Positives = 57/104 (55%), Gaps = 0/104 (0%) Query 39 GSWSKSRDFADDPQRAAAVREASRAERDRYLTSGLQPVDCRFCHVTVTVKRLGPGHTAVQ 98 SW+K+ DFAD P R AAV+ + ++ RYL G+ P+ C+ CH V V++ T+V+ Sbjct 3 ASWAKAPDFADQPARRAAVQAQTALDKQRYLEDGMTPLHCQGCHSRVLVRKYSAHQTSVE 62 Query 99 WNTEASRRCAYFTELRARGGDSARTRSCPRLTDSIEHAVAEGYL 142 W + RC F L G R +CP L +I+ AV EG L Sbjct 63 WTEPPATRCPVFARLAESGAAPGRPDTCPSLEKTIKWAVDEGVL 106 >gi|226304242|ref|YP_002764200.1| hypothetical protein RER_07530 [Rhodococcus erythropolis PR4] gi|226183357|dbj|BAH31461.1| conserved hypothetical protein [Rhodococcus erythropolis PR4] Length=123 Score = 82.0 bits (201), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 42/107 (40%), Positives = 60/107 (57%), Gaps = 0/107 (0%) Query 41 WSKSRDFADDPQRAAAVREASRAERDRYLTSGLQPVDCRFCHVTVTVKRLGPGHTAVQWN 100 W+K+ DFA +R A+ + ++ YL SGLQ VDC+ C V V++ HT+VQW Sbjct 14 WAKAPDFAGQTERLEAIAAQTIEDKHEYLDSGLQEVDCKACGACVLVRKNTYKHTSVQWT 73 Query 101 TEASRRCAYFTELRARGGDSARTRSCPRLTDSIEHAVAEGYLEHHDP 147 ++ + RC F E A G +A CP+L DSI AV +G + DP Sbjct 74 SDPALRCHNFKEAIASGQSTALKDGCPKLHDSIADAVRDGTITVRDP 120 >gi|319948617|ref|ZP_08022741.1| hypothetical protein ES5_04523 [Dietzia cinnamea P4] gi|319437698|gb|EFV92694.1| hypothetical protein ES5_04523 [Dietzia cinnamea P4] Length=131 Score = 74.7 bits (182), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 36/93 (39%), Positives = 53/93 (57%), Gaps = 0/93 (0%) Query 50 DPQRAAAVREASRAERDRYLTSGLQPVDCRFCHVTVTVKRLGPGHTAVQWNTEASRRCAY 109 DP RAA + + +R+ Y +G QPV+CR C V+V++ HT++QW + R+C Sbjct 17 DPARAARLHSYTDLDRETYTRAGFQPVECRSCGTCVSVRKNSEKHTSIQWTEGSDRKCPV 76 Query 110 FTELRARGGDSARTRSCPRLTDSIEHAVAEGYL 142 T+ RA G +CPR+ SI +A AEG L Sbjct 77 LTDWRAGGERPEGEDTCPRMLASIRYAYAEGLL 109 >gi|302525660|ref|ZP_07278002.1| conserved hypothetical protein [Streptomyces sp. AA4] gi|302434555|gb|EFL06371.1| conserved hypothetical protein [Streptomyces sp. AA4] Length=88 Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 34/78 (44%), Positives = 47/78 (61%), Gaps = 0/78 (0%) Query 63 AERDRYLTSGLQPVDCRFCHVTVTVKRLGPGHTAVQWNTEASRRCAYFTELRARGGDSAR 122 AE +LTSGL+P +CR C V VK+ HT++QW T+A+ C F A GG +A Sbjct 3 AEATEFLTSGLRPHECRSCGTCVLVKKNSLKHTSIQWTTDAATSCPVFAAHAASGGTTAL 62 Query 123 TRSCPRLTDSIEHAVAEG 140 +C +L DSI+ AV +G Sbjct 63 LDTCEKLADSIDSAVRDG 80 >gi|324106152|gb|ADY18319.1| putative ferredoxin [Rhodococcus rhodochrous] Length=125 Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 41/107 (39%), Positives = 55/107 (52%), Gaps = 1/107 (0%) Query 41 WSKSRDFADDPQRAAAVREASRAERDRYLTSGLQPVDCRFCHVTVTVKRLGPGHTAVQWN 100 W+KS DF+ P+RA AV + ++ YL SG V C C V V++ HT+VQW Sbjct 10 WAKSPDFSQWPERAEAVAAQTAIDKINYLESGQHEVQCHECGTCVLVRKNSLSHTSVQWQ 69 Query 101 TEASRRCAYFTELRARGGDSARTR-SCPRLTDSIEHAVAEGYLEHHD 146 + C F E + G S R CPRL +SI+ AV +G L D Sbjct 70 DDPDTVCPTFRETASLRGSSITPREGCPRLRESIDRAVLDGTLPVPD 116 >gi|333918592|ref|YP_004492173.1| hypothetical protein AS9A_0921 [Amycolicicoccus subflavus DQS3-9A1] gi|333480813|gb|AEF39373.1| hypothetical protein AS9A_0921 [Amycolicicoccus subflavus DQS3-9A1] Length=123 Score = 68.2 bits (165), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 35/90 (39%), Positives = 48/90 (54%), Gaps = 0/90 (0%) Query 54 AAAVREASRAERDRYLTSGLQPVDCRFCHVTVTVKRLGPGHTAVQWNTEASRRCAYFTEL 113 A A R + +R +LT GL P+ C C V VK+ P HT++QW T + C + E Sbjct 27 APAGRPETLTDRAEFLTGGLVPLQCSSCGTGVLVKKHSPKHTSIQWTTSPAESCPIYAER 86 Query 114 RARGGDSARTRSCPRLTDSIEHAVAEGYLE 143 A GG +A +C RL SI AV +G L+ Sbjct 87 LAGGGRTALFDTCERLAASIAQAVTDGKLK 116 >gi|300784424|ref|YP_003764715.1| hypothetical protein AMED_2518 [Amycolatopsis mediterranei U32] gi|299793938|gb|ADJ44313.1| conserved hypothetical protein [Amycolatopsis mediterranei U32] gi|340525845|gb|AEK41050.1| hypothetical protein RAM_12800 [Amycolatopsis mediterranei S699] Length=85 Score = 61.6 bits (148), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 33/86 (39%), Positives = 46/86 (54%), Gaps = 3/86 (3%) Query 61 SRAERDRYLTSGLQPVDCRFCHVTVTVKRLGPGHTAVQWNTEASRRCAYFTELRARGGDS 120 + AE+ +L+ GL+P CR C V VK+ HT++QW + + C F + G S Sbjct 2 TTAEQTEFLSGGLRPHQCRSCGTCVLVKKNSIQHTSIQWTSRPADTCPVFAD---TDGPS 58 Query 121 ARTRSCPRLTDSIEHAVAEGYLEHHD 146 A +CP+L DSI AV EG L D Sbjct 59 ALLDTCPKLADSISDAVREGTLAVAD 84 >gi|325674651|ref|ZP_08154338.1| hypothetical protein HMPREF0724_12120 [Rhodococcus equi ATCC 33707] gi|325554237|gb|EGD23912.1| hypothetical protein HMPREF0724_12120 [Rhodococcus equi ATCC 33707] Length=90 Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 31/70 (45%), Positives = 40/70 (58%), Gaps = 0/70 (0%) Query 73 LQPVDCRFCHVTVTVKRLGPGHTAVQWNTEASRRCAYFTELRARGGDSARTRSCPRLTDS 132 +QPV+C C V V++ HT+ QW +A CA F + A G S R+C LT+S Sbjct 1 MQPVECGACGNRVLVEKYSSTHTSTQWLEDAETACAEFRDAAANGTHSMYVRTCGALTES 60 Query 133 IEHAVAEGYL 142 IE AVAEG L Sbjct 61 IEEAVAEGRL 70 >gi|312138357|ref|YP_004005693.1| hypothetical protein REQ_08970 [Rhodococcus equi 103S] gi|311887696|emb|CBH47008.1| hypothetical protein REQ_08970 [Rhodococcus equi 103S] Length=90 Score = 57.8 bits (138), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 30/70 (43%), Positives = 40/70 (58%), Gaps = 0/70 (0%) Query 73 LQPVDCRFCHVTVTVKRLGPGHTAVQWNTEASRRCAYFTELRARGGDSARTRSCPRLTDS 132 +QPV+C C V V++ HT+ QW +A CA F + A G S R+C LT+S Sbjct 1 MQPVECGACGNRVLVEKYSSTHTSTQWLEDAETACAEFRDAAANGTHSMYVRTCGALTES 60 Query 133 IEHAVAEGYL 142 I+ AVAEG L Sbjct 61 IDEAVAEGRL 70 >gi|145595198|ref|YP_001159495.1| hypothetical protein Strop_2673 [Salinispora tropica CNB-440] gi|145304535|gb|ABP55117.1| hypothetical protein Strop_2673 [Salinispora tropica CNB-440] Length=87 Score = 54.7 bits (130), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 32/82 (40%), Positives = 41/82 (50%), Gaps = 7/82 (8%) Query 64 ERDRYLTSGLQPVDCRFCHVTVTVKRLGPGHTAVQWNTEASRRCAYFTELRARGGDSART 123 ER YL G + C C V V++ P T+VQW+T A R+C T G + T Sbjct 9 ERQTYLIGGFAELSCARCAALVRVRKSSPQQTSVQWSTRAVRQCPVLT-----GNEQPHT 63 Query 124 --RSCPRLTDSIEHAVAEGYLE 143 +CP L SI+HAV G LE Sbjct 64 PVPTCPDLRTSIQHAVRTGRLE 85 >gi|296141521|ref|YP_003648764.1| hypothetical protein Tpau_3850 [Tsukamurella paurometabola DSM 20162] gi|296029655|gb|ADG80425.1| hypothetical protein Tpau_3850 [Tsukamurella paurometabola DSM 20162] Length=116 Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 32/88 (37%), Positives = 45/88 (52%), Gaps = 4/88 (4%) Query 60 ASRAERDRYLTSGLQPVDCRFCHVTVTVKRLGPGHTAVQWNTEASRRCAYFTELRARGGD 119 A+ A+R +LT G P++C C V V V++ T++QW A R CA F + G Sbjct 16 ATVADRQGFLTDGFTPLNCGTCGVAVQVRKNSREQTSIQWCGSA-RDCAVFA---SDGAG 71 Query 120 SARTRSCPRLTDSIEHAVAEGYLEHHDP 147 SA +CPRL +SI A G + P Sbjct 72 SALHATCPRLMESITRAAKLGAVPIPTP 99 >gi|159038445|ref|YP_001537698.1| hypothetical protein Sare_2881 [Salinispora arenicola CNS-205] gi|157917280|gb|ABV98707.1| conserved hypothetical protein [Salinispora arenicola CNS-205] Length=87 Score = 52.0 bits (123), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 30/80 (38%), Positives = 39/80 (49%), Gaps = 3/80 (3%) Query 64 ERDRYLTSGLQPVDCRFCHVTVTVKRLGPGHTAVQWNTEASRRCAYFTELRARGGDSART 123 ER YLT G + C C V V++ P T+VQW T ++R+C T A Sbjct 9 ERQEYLTGGFAELSCARCAALVRVRKSSPQQTSVQWTTRSARQCPTLT---ADARPHPLV 65 Query 124 RSCPRLTDSIEHAVAEGYLE 143 +CP L SI+ AV G LE Sbjct 66 PTCPDLRTSIQWAVRTGRLE 85 >gi|311744216|ref|ZP_07718020.1| conserved hypothetical protein [Aeromicrobium marinum DSM 15272] gi|311312389|gb|EFQ82302.1| conserved hypothetical protein [Aeromicrobium marinum DSM 15272] Length=99 Score = 52.0 bits (123), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 31/85 (37%), Positives = 41/85 (49%), Gaps = 0/85 (0%) Query 64 ERDRYLTSGLQPVDCRFCHVTVTVKRLGPGHTAVQWNTEASRRCAYFTELRARGGDSART 123 +R Y + L V C C V V++ HT++QW+ EA CA F L A+ G Sbjct 14 DRALYTRARLAEVACLDCTARVLVRKNSEHHTSIQWSREAVAACATFDRLAAQAGGRPVH 73 Query 124 RSCPRLTDSIEHAVAEGYLEHHDPN 148 CPRL SIE A +G L P+ Sbjct 74 AECPRLAASIEAAARDGALPVGSPD 98 >gi|54024211|ref|YP_118453.1| hypothetical protein nfa22420 [Nocardia farcinica IFM 10152] gi|54015719|dbj|BAD57089.1| hypothetical protein [Nocardia farcinica IFM 10152] Length=85 Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 27/70 (39%), Positives = 35/70 (50%), Gaps = 0/70 (0%) Query 73 LQPVDCRFCHVTVTVKRLGPGHTAVQWNTEASRRCAYFTELRARGGDSARTRSCPRLTDS 132 +Q + C C V V++ P HT+VQW EA C F A G S +C L DS Sbjct 1 MQEIRCATCANRVLVEKFSPSHTSVQWLDEAEAACPEFARRAALGESSKWIPTCGALRDS 60 Query 133 IEHAVAEGYL 142 I+ AV +G L Sbjct 61 IDRAVLDGVL 70 >gi|254818664|ref|ZP_05223665.1| hypothetical protein MintA_02009 [Mycobacterium intracellulare ATCC 13950] Length=95 Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 30/83 (37%), Positives = 41/83 (50%), Gaps = 1/83 (1%) Query 66 DRYLTSGLQPVDCRFCHVTVTVKRLGPGHTAVQWNTEASRRCAYFTEL-RARGGDSARTR 124 +R + + + PV CR C V ++ T+VQWN +A++RC E R G Sbjct 11 NRLVDTPMAPVTCRECGARVLARKSSWNQTSVQWNADAAKRCIERREAERLAGHHRGPFL 70 Query 125 SCPRLTDSIEHAVAEGYLEHHDP 147 C L DSI+ AVA G L DP Sbjct 71 VCAALRDSIQAAVATGELAVVDP 93 >gi|342860667|ref|ZP_08717317.1| hypothetical protein MCOL_17388 [Mycobacterium colombiense CECT 3035] gi|342131691|gb|EGT84948.1| hypothetical protein MCOL_17388 [Mycobacterium colombiense CECT 3035] Length=94 Score = 47.4 bits (111), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 33/90 (37%), Positives = 43/90 (48%), Gaps = 1/90 (1%) Query 59 EASRAERDRYLTSGLQPVDCRFCHVTVTVKRLGPGHTAVQWNTEASRRCAYFTEL-RARG 117 EAS E +R + + PV CR C V ++ T+VQW+ +S RC E R G Sbjct 3 EASVREDNRLEAAPMVPVTCRECRARVLARKSSWNQTSVQWDAASSARCVERREAERLAG 62 Query 118 GDSARTRSCPRLTDSIEHAVAEGYLEHHDP 147 +C L DSI+ AVA G L DP Sbjct 63 HHRGPFLACEALRDSIQVAVATGELAIVDP 92 >gi|343924797|ref|ZP_08764336.1| hypothetical protein GOALK_026_00680 [Gordonia alkanivorans NBRC 16433] gi|343765304|dbj|GAA11262.1| hypothetical protein GOALK_026_00680 [Gordonia alkanivorans NBRC 16433] Length=99 Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust. Identities = 23/69 (34%), Positives = 34/69 (50%), Gaps = 1/69 (1%) Query 73 LQPVDCRFCHVTVTVKRLGPGHTAVQWNTEASRRCAYFTELRARG-GDSARTRSCPRLTD 131 +QP+ C+ C V+V + P HT++QW +A + C A G + C L Sbjct 1 MQPLVCQTCDARVSVAKYSPAHTSIQWTADAKQSCHEMASASAVGNANCGYVLRCAALDR 60 Query 132 SIEHAVAEG 140 SI+HAV G Sbjct 61 SIDHAVTRG 69 >gi|324106142|gb|ADY18311.1| putative ferredoxin [Rhodococcus rhodochrous] Length=88 Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust. Identities = 25/74 (34%), Positives = 37/74 (50%), Gaps = 0/74 (0%) Query 73 LQPVDCRFCHVTVTVKRLGPGHTAVQWNTEASRRCAYFTELRARGGDSARTRSCPRLTDS 132 ++P+ C C V V++ HT++QWNT+A RRC + G A SC L ++ Sbjct 5 MEPLRCGECAAQVLVRKNSWEHTSIQWNTDARRRCRIEQDGGREGRPGAPRMSCSYLDET 64 Query 133 IEHAVAEGYLEHHD 146 I A G +E D Sbjct 65 ISRAATSGVIEVFD 78 >gi|326331640|ref|ZP_08197928.1| hypothetical protein NBCG_03079 [Nocardioidaceae bacterium Broad-1] gi|325950439|gb|EGD42491.1| hypothetical protein NBCG_03079 [Nocardioidaceae bacterium Broad-1] Length=101 Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust. Identities = 30/78 (39%), Positives = 39/78 (50%), Gaps = 3/78 (3%) Query 68 YLTSGLQPVDCRFCHVTVTVKRLGPGHTAVQWNTEASRRCAYFTELRARGGDSART--RS 125 Y + L V+C C V VK+ T+VQW EA +C +A D AR Sbjct 18 YTQARLVEVECLDCLARVGVKKNSEHQTSVQWTAEAQAQCPDLVRRKA-AADGARLVHAR 76 Query 126 CPRLTDSIEHAVAEGYLE 143 CPRL SIE AVA+G ++ Sbjct 77 CPRLAASIEAAVADGRIQ 94 >gi|119716745|ref|YP_923710.1| hypothetical protein Noca_2519 [Nocardioides sp. JS614] gi|119537406|gb|ABL82023.1| conserved hypothetical protein [Nocardioides sp. JS614] Length=100 Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust. Identities = 27/83 (33%), Positives = 41/83 (50%), Gaps = 0/83 (0%) Query 60 ASRAERDRYLTSGLQPVDCRFCHVTVTVKRLGPGHTAVQWNTEASRRCAYFTELRARGGD 119 A+ ++ Y + L V C C +V VK+ HT++QW+ +A C F + + G Sbjct 10 ATLEDQHLYTRARLVEVACLDCLASVGVKKNSEHHTSIQWSDQALAHCQEFARMATQPGG 69 Query 120 SARTRSCPRLTDSIEHAVAEGYL 142 CPRL SI+ AV EG + Sbjct 70 RPVHAGCPRLAASIDAAVREGRI 92 >gi|145225143|ref|YP_001135821.1| hypothetical protein Mflv_4565 [Mycobacterium gilvum PYR-GCK] gi|315445510|ref|YP_004078389.1| hypothetical protein Mspyr1_39650 [Mycobacterium sp. Spyr1] gi|145217629|gb|ABP47033.1| conserved hypothetical protein [Mycobacterium gilvum PYR-GCK] gi|315263813|gb|ADU00555.1| hypothetical protein Mspyr1_39650 [Mycobacterium sp. Spyr1] Length=89 Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust. Identities = 28/82 (35%), Positives = 38/82 (47%), Gaps = 1/82 (1%) Query 66 DRYLTSG-LQPVDCRFCHVTVTVKRLGPGHTAVQWNTEASRRCAYFTELRARGGDSARTR 124 D L G + PV C C TV V++ T+VQW+ A+ RC + R G+ Sbjct 6 DNRLADGPMAPVQCNRCAATVLVRKSSWHQTSVQWDATATARCEERHDARQLAGEGGLFL 65 Query 125 SCPRLTDSIEHAVAEGYLEHHD 146 +C L DS+ AV G L D Sbjct 66 TCSALGDSVADAVVRGTLHTVD 87 >gi|226361623|ref|YP_002779401.1| hypothetical protein ROP_22090 [Rhodococcus opacus B4] gi|226240108|dbj|BAH50456.1| hypothetical protein [Rhodococcus opacus B4] Length=84 Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust. Identities = 25/68 (37%), Positives = 34/68 (50%), Gaps = 0/68 (0%) Query 73 LQPVDCRFCHVTVTVKRLGPGHTAVQWNTEASRRCAYFTELRARGGDSARTRSCPRLTDS 132 + PV+CR C V V++ HT+VQW +A R C F G S +C L S Sbjct 1 MLPVECRRCGNAVLVEKYSEAHTSVQWLDDAERTCPEFASRAEAGEHSMFVPTCGALRGS 60 Query 133 IEHAVAEG 140 I+ AV +G Sbjct 61 IDDAVEDG 68 Lambda K H 0.319 0.132 0.421 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 130023393564 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40