BLASTP 2.2.25+


Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.



Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
           15,229,318 sequences; 5,219,829,388 total letters



Query= Rv3528c

Length=237
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

gi|15610664|ref|NP_218045.1|  hypothetical protein Rv3528c [Mycob...   490    6e-137
gi|298527006|ref|ZP_07014415.1|  conserved hypothetical protein [...   488    3e-136
gi|340628492|ref|YP_004746944.1|  hypothetical protein MCAN_35391...   484    5e-135
gi|308372669|ref|ZP_07429422.2|  LOW QUALITY PROTEIN: hypothetica...   464    3e-129
gi|308232491|ref|ZP_07416216.2|  hypothetical protein TMAG_00018 ...   405    2e-111
gi|187761548|dbj|BAG31969.1|  putative methyltransferase [Mycobac...   332    3e-89 
gi|254819585|ref|ZP_05224586.1|  hypothetical protein MintA_06659...   332    4e-89 
gi|168479938|dbj|BAG11526.1|  putative methyltransferase [Mycobac...   324    6e-87 
gi|218778897|ref|YP_002430215.1|  hypothetical protein Dalk_1044 ...   224    1e-56 
gi|196016354|ref|XP_002118030.1|  hypothetical protein TRIADDRAFT...  37.7    1.3   
gi|320161130|ref|YP_004174354.1|  putative oxidoreductase [Anaero...  37.4    1.7   
gi|341875557|gb|EGT31492.1|  hypothetical protein CAEBREN_06106 [...  37.0    2.7   
gi|296188633|ref|ZP_06857021.1|  membrane family protein [Clostri...  36.6    3.4   
gi|225320663|dbj|BAH29727.1|  UDP-glucose 4-epimerase [Dicyema ja...  36.6    3.5   
gi|255524832|ref|ZP_05391782.1|  conserved hypothetical protein [...  36.6    3.5   
gi|326528779|dbj|BAJ97411.1|  predicted protein [Hordeum vulgare ...  35.0    9.8   


>gi|15610664|ref|NP_218045.1| hypothetical protein Rv3528c [Mycobacterium tuberculosis H37Rv]
 gi|15843139|ref|NP_338176.1| hypothetical protein MT3629 [Mycobacterium tuberculosis CDC1551]
 gi|31794704|ref|NP_857197.1| hypothetical protein Mb3558c [Mycobacterium bovis AF2122/97]
 48 more sequence titles
 
gi|121639447|ref|YP_979671.1| hypothetical protein BCG_3592c [Mycobacterium bovis BCG str. 
Pasteur 1173P2]
 gi|148663391|ref|YP_001284914.1| hypothetical protein MRA_3567 [Mycobacterium tuberculosis H37Ra]
 gi|148824734|ref|YP_001289488.1| hypothetical protein TBFG_13561 [Mycobacterium tuberculosis F11]
 gi|167969140|ref|ZP_02551417.1| hypothetical protein MtubH3_14350 [Mycobacterium tuberculosis 
H37Ra]
 gi|224991944|ref|YP_002646633.1| hypothetical protein JTY_3593 [Mycobacterium bovis BCG str. Tokyo 
172]
 gi|253800569|ref|YP_003033570.1| hypothetical protein TBMG_03567 [Mycobacterium tuberculosis KZN 
1435]
 gi|254234105|ref|ZP_04927429.1| hypothetical protein TBCG_03457 [Mycobacterium tuberculosis C]
 gi|254366094|ref|ZP_04982138.1| hypothetical protein TBHG_03468 [Mycobacterium tuberculosis str. 
Haarlem]
 gi|254552634|ref|ZP_05143081.1| hypothetical protein Mtube_19670 [Mycobacterium tuberculosis 
'98-R604 INH-RIF-EM']
 gi|289440957|ref|ZP_06430701.1| hypothetical protein TBLG_01700 [Mycobacterium tuberculosis T46]
 gi|289445120|ref|ZP_06434864.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A]
 gi|289555793|ref|ZP_06445003.1| hypothetical protein TBXG_03543 [Mycobacterium tuberculosis KZN 
605]
 gi|289571767|ref|ZP_06451994.1| hypothetical protein TBJG_02655 [Mycobacterium tuberculosis T17]
 gi|289572180|ref|ZP_06452407.1| conserved hypothetical protein [Mycobacterium tuberculosis K85]
 gi|289747365|ref|ZP_06506743.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
 gi|289752241|ref|ZP_06511619.1| hypothetical protein TBDG_03486 [Mycobacterium tuberculosis T92]
 gi|289755657|ref|ZP_06515035.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
 gi|289759684|ref|ZP_06519062.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
 gi|289763706|ref|ZP_06523084.1| hypothetical protein TBIG_00015 [Mycobacterium tuberculosis GM 
1503]
 gi|297636199|ref|ZP_06953979.1| hypothetical protein MtubK4_18835 [Mycobacterium tuberculosis 
KZN 4207]
 gi|297733193|ref|ZP_06962311.1| hypothetical protein MtubKR_18975 [Mycobacterium tuberculosis 
KZN R506]
 gi|307086316|ref|ZP_07495429.1| hypothetical protein TMLG_00016 [Mycobacterium tuberculosis SUMu012]
 gi|313660523|ref|ZP_07817403.1| hypothetical protein MtubKV_18965 [Mycobacterium tuberculosis 
KZN V2475]
 gi|1666132|emb|CAB05049.1| HYPOTHETICAL PROTEIN Rv3528c [Mycobacterium tuberculosis H37Rv]
 gi|13883488|gb|AAK47990.1| hypothetical protein MT3629 [Mycobacterium tuberculosis CDC1551]
 gi|31620301|emb|CAD95744.1| HYPOTHETICAL PROTEIN Mb3558c [Mycobacterium bovis AF2122/97]
 gi|121495095|emb|CAL73581.1| Hypothetical protein BCG_3592c [Mycobacterium bovis BCG str. 
Pasteur 1173P2]
 gi|124603773|gb|EAY61736.1| hypothetical protein TBCG_03457 [Mycobacterium tuberculosis C]
 gi|134151606|gb|EBA43651.1| hypothetical protein TBHG_03468 [Mycobacterium tuberculosis str. 
Haarlem]
 gi|148507543|gb|ABQ75352.1| hypothetical protein MRA_3567 [Mycobacterium tuberculosis H37Ra]
 gi|148723261|gb|ABR07886.1| hypothetical protein TBFG_13561 [Mycobacterium tuberculosis F11]
 gi|224775059|dbj|BAH27865.1| hypothetical protein JTY_3593 [Mycobacterium bovis BCG str. Tokyo 
172]
 gi|253322072|gb|ACT26675.1| hypothetical protein TBMG_03567 [Mycobacterium tuberculosis KZN 
1435]
 gi|289413876|gb|EFD11116.1| hypothetical protein TBLG_01700 [Mycobacterium tuberculosis T46]
 gi|289418078|gb|EFD15279.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A]
 gi|289440425|gb|EFD22918.1| hypothetical protein TBXG_03543 [Mycobacterium tuberculosis KZN 
605]
 gi|289536611|gb|EFD41189.1| conserved hypothetical protein [Mycobacterium tuberculosis K85]
 gi|289545521|gb|EFD49169.1| hypothetical protein TBJG_02655 [Mycobacterium tuberculosis T17]
 gi|289687893|gb|EFD55381.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
 gi|289692828|gb|EFD60257.1| hypothetical protein TBDG_03486 [Mycobacterium tuberculosis T92]
 gi|289696244|gb|EFD63673.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
 gi|289711212|gb|EFD75228.1| hypothetical protein TBIG_00015 [Mycobacterium tuberculosis GM 
1503]
 gi|289715248|gb|EFD79260.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
 gi|308364247|gb|EFP53098.1| hypothetical protein TMLG_00016 [Mycobacterium tuberculosis SUMu012]
 gi|326905368|gb|EGE52301.1| hypothetical protein TBPG_03319 [Mycobacterium tuberculosis W-148]
 gi|328460300|gb|AEB05723.1| hypothetical protein TBSG_03594 [Mycobacterium tuberculosis KZN 
4207]
 gi|341603468|emb|CCC66149.1| hypothetical protein BCGM_3556c [Mycobacterium bovis BCG str. 
Moreau RDJ]
 gi|344221360|gb|AEN01991.1| hypothetical protein MTCTRI2_3592 [Mycobacterium tuberculosis 
CTRI-2]
Length=237

 Score =  490 bits (1262),  Expect = 6e-137, Method: Compositional matrix adjust.
 Identities = 237/237 (100%), Positives = 237/237 (100%), Gaps = 0/237 (0%)

Query  1    MMLDRLRQGGYWLVRGKINLIDRAFTSCRIESFADLGAVWGVEGAYTFRALDKYPVKEAV  60
            MMLDRLRQGGYWLVRGKINLIDRAFTSCRIESFADLGAVWGVEGAYTFRALDKYPVKEAV
Sbjct  1    MMLDRLRQGGYWLVRGKINLIDRAFTSCRIESFADLGAVWGVEGAYTFRALDKYPVKEAV  60

Query  61   LVDGRITPTVAARANSYPQLRVIEGNFGDQEIADKVGNVDALFLFDVLLHQVSPDWDTIL  120
            LVDGRITPTVAARANSYPQLRVIEGNFGDQEIADKVGNVDALFLFDVLLHQVSPDWDTIL
Sbjct  61   LVDGRITPTVAARANSYPQLRVIEGNFGDQEIADKVGNVDALFLFDVLLHQVSPDWDTIL  120

Query  121  DMYAKNVRCLLIYNQQWIGSTTTVRLLDLGEKHYFRNVPHSKLNKAYRDLFQKLDKKHPD  180
            DMYAKNVRCLLIYNQQWIGSTTTVRLLDLGEKHYFRNVPHSKLNKAYRDLFQKLDKKHPD
Sbjct  121  DMYAKNVRCLLIYNQQWIGSTTTVRLLDLGEKHYFRNVPHSKLNKAYRDLFQKLDKKHPD  180

Query  181  HDKPWRDIPDIWQWGITDADLESKASELGFKLLYKEDCRGFGWLPNIQNRAFLFARQ  237
            HDKPWRDIPDIWQWGITDADLESKASELGFKLLYKEDCRGFGWLPNIQNRAFLFARQ
Sbjct  181  HDKPWRDIPDIWQWGITDADLESKASELGFKLLYKEDCRGFGWLPNIQNRAFLFARQ  237


>gi|298527006|ref|ZP_07014415.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A]
 gi|308369154|ref|ZP_07416747.2| hypothetical protein TMBG_02063 [Mycobacterium tuberculosis SUMu002]
 gi|308371379|ref|ZP_07424755.2| hypothetical protein TMCG_03651 [Mycobacterium tuberculosis SUMu003]
 7 more sequence titles
 
gi|308373941|ref|ZP_07434209.2| hypothetical protein TMFG_01462 [Mycobacterium tuberculosis SUMu006]
 gi|308374909|ref|ZP_07442033.2| hypothetical protein TMGG_01064 [Mycobacterium tuberculosis SUMu007]
 gi|298496800|gb|EFI32094.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A]
 gi|308328510|gb|EFP17361.1| hypothetical protein TMBG_02063 [Mycobacterium tuberculosis SUMu002]
 gi|308328923|gb|EFP17774.1| hypothetical protein TMCG_03651 [Mycobacterium tuberculosis SUMu003]
 gi|308343577|gb|EFP32428.1| hypothetical protein TMFG_01462 [Mycobacterium tuberculosis SUMu006]
 gi|308348045|gb|EFP36896.1| hypothetical protein TMGG_01064 [Mycobacterium tuberculosis SUMu007]
Length=236

 Score =  488 bits (1256),  Expect = 3e-136, Method: Compositional matrix adjust.
 Identities = 236/236 (100%), Positives = 236/236 (100%), Gaps = 0/236 (0%)

Query  2    MLDRLRQGGYWLVRGKINLIDRAFTSCRIESFADLGAVWGVEGAYTFRALDKYPVKEAVL  61
            MLDRLRQGGYWLVRGKINLIDRAFTSCRIESFADLGAVWGVEGAYTFRALDKYPVKEAVL
Sbjct  1    MLDRLRQGGYWLVRGKINLIDRAFTSCRIESFADLGAVWGVEGAYTFRALDKYPVKEAVL  60

Query  62   VDGRITPTVAARANSYPQLRVIEGNFGDQEIADKVGNVDALFLFDVLLHQVSPDWDTILD  121
            VDGRITPTVAARANSYPQLRVIEGNFGDQEIADKVGNVDALFLFDVLLHQVSPDWDTILD
Sbjct  61   VDGRITPTVAARANSYPQLRVIEGNFGDQEIADKVGNVDALFLFDVLLHQVSPDWDTILD  120

Query  122  MYAKNVRCLLIYNQQWIGSTTTVRLLDLGEKHYFRNVPHSKLNKAYRDLFQKLDKKHPDH  181
            MYAKNVRCLLIYNQQWIGSTTTVRLLDLGEKHYFRNVPHSKLNKAYRDLFQKLDKKHPDH
Sbjct  121  MYAKNVRCLLIYNQQWIGSTTTVRLLDLGEKHYFRNVPHSKLNKAYRDLFQKLDKKHPDH  180

Query  182  DKPWRDIPDIWQWGITDADLESKASELGFKLLYKEDCRGFGWLPNIQNRAFLFARQ  237
            DKPWRDIPDIWQWGITDADLESKASELGFKLLYKEDCRGFGWLPNIQNRAFLFARQ
Sbjct  181  DKPWRDIPDIWQWGITDADLESKASELGFKLLYKEDCRGFGWLPNIQNRAFLFARQ  236


>gi|340628492|ref|YP_004746944.1| hypothetical protein MCAN_35391 [Mycobacterium canettii CIPT 
140010059]
 gi|340006682|emb|CCC45870.1| hypothetical protein MCAN_35391 [Mycobacterium canettii CIPT 
140010059]
Length=237

 Score =  484 bits (1246),  Expect = 5e-135, Method: Compositional matrix adjust.
 Identities = 233/237 (99%), Positives = 235/237 (99%), Gaps = 0/237 (0%)

Query  1    MMLDRLRQGGYWLVRGKINLIDRAFTSCRIESFADLGAVWGVEGAYTFRALDKYPVKEAV  60
            MMLDRLRQGGYWLVRGKINLIDRAFTSCRIESFADLGAVWGVEGAYTFRALDKYPVKEAV
Sbjct  1    MMLDRLRQGGYWLVRGKINLIDRAFTSCRIESFADLGAVWGVEGAYTFRALDKYPVKEAV  60

Query  61   LVDGRITPTVAARANSYPQLRVIEGNFGDQEIADKVGNVDALFLFDVLLHQVSPDWDTIL  120
            LVDGRITPTVAARA SYPQLRVIEGNFGD+EIADKVGNVDALFLFDVLLHQVSPDWDTIL
Sbjct  61   LVDGRITPTVAARAKSYPQLRVIEGNFGDEEIADKVGNVDALFLFDVLLHQVSPDWDTIL  120

Query  121  DMYAKNVRCLLIYNQQWIGSTTTVRLLDLGEKHYFRNVPHSKLNKAYRDLFQKLDKKHPD  180
            DMYAKNVRCLLIYNQQW GSTTTVRLLDLGEKHYFRNVPHSKLNKAYRDLF+KLDKKHPD
Sbjct  121  DMYAKNVRCLLIYNQQWTGSTTTVRLLDLGEKHYFRNVPHSKLNKAYRDLFEKLDKKHPD  180

Query  181  HDKPWRDIPDIWQWGITDADLESKASELGFKLLYKEDCRGFGWLPNIQNRAFLFARQ  237
            HDKPWRDIPDIWQWGITDADLESKASELGFKLLYKEDCRGFGWLPNIQNRAFLFARQ
Sbjct  181  HDKPWRDIPDIWQWGITDADLESKASELGFKLLYKEDCRGFGWLPNIQNRAFLFARQ  237


>gi|308372669|ref|ZP_07429422.2| LOW QUALITY PROTEIN: hypothetical protein TMEG_00016 [Mycobacterium 
tuberculosis SUMu005]
 gi|308340312|gb|EFP29163.1| LOW QUALITY PROTEIN: hypothetical protein TMEG_00016 [Mycobacterium 
tuberculosis SUMu005]
Length=225

 Score =  464 bits (1195),  Expect = 3e-129, Method: Compositional matrix adjust.
 Identities = 225/225 (100%), Positives = 225/225 (100%), Gaps = 0/225 (0%)

Query  13   LVRGKINLIDRAFTSCRIESFADLGAVWGVEGAYTFRALDKYPVKEAVLVDGRITPTVAA  72
            LVRGKINLIDRAFTSCRIESFADLGAVWGVEGAYTFRALDKYPVKEAVLVDGRITPTVAA
Sbjct  1    LVRGKINLIDRAFTSCRIESFADLGAVWGVEGAYTFRALDKYPVKEAVLVDGRITPTVAA  60

Query  73   RANSYPQLRVIEGNFGDQEIADKVGNVDALFLFDVLLHQVSPDWDTILDMYAKNVRCLLI  132
            RANSYPQLRVIEGNFGDQEIADKVGNVDALFLFDVLLHQVSPDWDTILDMYAKNVRCLLI
Sbjct  61   RANSYPQLRVIEGNFGDQEIADKVGNVDALFLFDVLLHQVSPDWDTILDMYAKNVRCLLI  120

Query  133  YNQQWIGSTTTVRLLDLGEKHYFRNVPHSKLNKAYRDLFQKLDKKHPDHDKPWRDIPDIW  192
            YNQQWIGSTTTVRLLDLGEKHYFRNVPHSKLNKAYRDLFQKLDKKHPDHDKPWRDIPDIW
Sbjct  121  YNQQWIGSTTTVRLLDLGEKHYFRNVPHSKLNKAYRDLFQKLDKKHPDHDKPWRDIPDIW  180

Query  193  QWGITDADLESKASELGFKLLYKEDCRGFGWLPNIQNRAFLFARQ  237
            QWGITDADLESKASELGFKLLYKEDCRGFGWLPNIQNRAFLFARQ
Sbjct  181  QWGITDADLESKASELGFKLLYKEDCRGFGWLPNIQNRAFLFARQ  225


>gi|308232491|ref|ZP_07416216.2| hypothetical protein TMAG_00018 [Mycobacterium tuberculosis SUMu001]
 gi|308372573|ref|ZP_07429119.2| hypothetical protein TMDG_01258 [Mycobacterium tuberculosis SUMu004]
 gi|308376156|ref|ZP_07437821.2| hypothetical protein TMHG_02586 [Mycobacterium tuberculosis SUMu008]
 12 more sequence titles
 
gi|308378361|ref|ZP_07482319.2| hypothetical protein TMIG_03150 [Mycobacterium tuberculosis SUMu009]
 gi|308379538|ref|ZP_07486658.2| hypothetical protein TMJG_00773 [Mycobacterium tuberculosis SUMu010]
 gi|308380725|ref|ZP_07490876.2| hypothetical protein TMKG_00765 [Mycobacterium tuberculosis SUMu011]
 gi|308213755|gb|EFO73154.1| hypothetical protein TMAG_00018 [Mycobacterium tuberculosis SUMu001]
 gi|308332820|gb|EFP21671.1| hypothetical protein TMDG_01258 [Mycobacterium tuberculosis SUMu004]
 gi|308352041|gb|EFP40892.1| hypothetical protein TMHG_02586 [Mycobacterium tuberculosis SUMu008]
 gi|308352828|gb|EFP41679.1| hypothetical protein TMIG_03150 [Mycobacterium tuberculosis SUMu009]
 gi|308356678|gb|EFP45529.1| hypothetical protein TMJG_00773 [Mycobacterium tuberculosis SUMu010]
 gi|308360632|gb|EFP49483.1| hypothetical protein TMKG_00765 [Mycobacterium tuberculosis SUMu011]
 gi|323717798|gb|EGB26995.1| hypothetical protein TMMG_00014 [Mycobacterium tuberculosis CDC1551A]
 gi|339296347|gb|AEJ48458.1| hypothetical protein CCDC5079_3269 [Mycobacterium tuberculosis 
CCDC5079]
 gi|339299948|gb|AEJ52058.1| hypothetical protein CCDC5180_3221 [Mycobacterium tuberculosis 
CCDC5180]
Length=196

 Score =  405 bits (1042),  Expect = 2e-111, Method: Compositional matrix adjust.
 Identities = 195/196 (99%), Positives = 196/196 (100%), Gaps = 0/196 (0%)

Query  42   VEGAYTFRALDKYPVKEAVLVDGRITPTVAARANSYPQLRVIEGNFGDQEIADKVGNVDA  101
            +EGAYTFRALDKYPVKEAVLVDGRITPTVAARANSYPQLRVIEGNFGDQEIADKVGNVDA
Sbjct  1    MEGAYTFRALDKYPVKEAVLVDGRITPTVAARANSYPQLRVIEGNFGDQEIADKVGNVDA  60

Query  102  LFLFDVLLHQVSPDWDTILDMYAKNVRCLLIYNQQWIGSTTTVRLLDLGEKHYFRNVPHS  161
            LFLFDVLLHQVSPDWDTILDMYAKNVRCLLIYNQQWIGSTTTVRLLDLGEKHYFRNVPHS
Sbjct  61   LFLFDVLLHQVSPDWDTILDMYAKNVRCLLIYNQQWIGSTTTVRLLDLGEKHYFRNVPHS  120

Query  162  KLNKAYRDLFQKLDKKHPDHDKPWRDIPDIWQWGITDADLESKASELGFKLLYKEDCRGF  221
            KLNKAYRDLFQKLDKKHPDHDKPWRDIPDIWQWGITDADLESKASELGFKLLYKEDCRGF
Sbjct  121  KLNKAYRDLFQKLDKKHPDHDKPWRDIPDIWQWGITDADLESKASELGFKLLYKEDCRGF  180

Query  222  GWLPNIQNRAFLFARQ  237
            GWLPNIQNRAFLFARQ
Sbjct  181  GWLPNIQNRAFLFARQ  196


>gi|187761548|dbj|BAG31969.1| putative methyltransferase [Mycobacterium intracellulare]
Length=233

 Score =  332 bits (851),  Expect = 3e-89, Method: Compositional matrix adjust.
 Identities = 155/223 (70%), Positives = 185/223 (83%), Gaps = 0/223 (0%)

Query  15   RGKINLIDRAFTSCRIESFADLGAVWGVEGAYTFRALDKYPVKEAVLVDGRITPTVAARA  74
            + KI LIDRAFTS  I+SFADLGAVW VEGAYTF AL+ + +K+A LVD  +TPTV+ARA
Sbjct  11   KDKIELIDRAFTSLGIQSFADLGAVWRVEGAYTFHALETHQIKDAALVDLNVTPTVSARA  70

Query  75   NSYPQLRVIEGNFGDQEIADKVGNVDALFLFDVLLHQVSPDWDTILDMYAKNVRCLLIYN  134
             S+PQLR+I GNFGDQ +AD+VGNVDA+FLFDVLLHQVSPDWD IL+MYAK    LLIYN
Sbjct  71   QSHPQLRLIGGNFGDQAVADQVGNVDAVFLFDVLLHQVSPDWDAILEMYAKQTNSLLIYN  130

Query  135  QQWIGSTTTVRLLDLGEKHYFRNVPHSKLNKAYRDLFQKLDKKHPDHDKPWRDIPDIWQW  194
            QQW GS  TVRLLDLGEK YFRNVPHS+  + Y +LF+KL++KHPD D+ WRD P +WQW
Sbjct  131  QQWTGSEETVRLLDLGEKEYFRNVPHSRRVEEYENLFEKLNEKHPDMDRTWRDFPGVWQW  190

Query  195  GITDADLESKASELGFKLLYKEDCRGFGWLPNIQNRAFLFARQ  237
            GITDADLE+K S+LGFKL+YK+DC  FG L N +N+AF+F R+
Sbjct  191  GITDADLEAKVSQLGFKLVYKKDCGRFGRLRNFRNQAFIFTRE  233


>gi|254819585|ref|ZP_05224586.1| hypothetical protein MintA_06659 [Mycobacterium intracellulare 
ATCC 13950]
Length=226

 Score =  332 bits (850),  Expect = 4e-89, Method: Compositional matrix adjust.
 Identities = 155/223 (70%), Positives = 185/223 (83%), Gaps = 0/223 (0%)

Query  15   RGKINLIDRAFTSCRIESFADLGAVWGVEGAYTFRALDKYPVKEAVLVDGRITPTVAARA  74
            + KI LIDRAFTS  I+SFADLGAVW VEGAYTF AL+ + +K+A LVD  +TPTV+ARA
Sbjct  4    KDKIELIDRAFTSLGIQSFADLGAVWRVEGAYTFHALETHQIKDAALVDLNVTPTVSARA  63

Query  75   NSYPQLRVIEGNFGDQEIADKVGNVDALFLFDVLLHQVSPDWDTILDMYAKNVRCLLIYN  134
             S+PQLR+I GNFGDQ +AD+VGNVDA+FLFDVLLHQVSPDWD IL+MYAK    LLIYN
Sbjct  64   QSHPQLRLIGGNFGDQAVADQVGNVDAVFLFDVLLHQVSPDWDAILEMYAKQTNSLLIYN  123

Query  135  QQWIGSTTTVRLLDLGEKHYFRNVPHSKLNKAYRDLFQKLDKKHPDHDKPWRDIPDIWQW  194
            QQW GS  TVRLLDLGEK YFRNVPHS+  + Y +LF+KL++KHPD D+ WRD P +WQW
Sbjct  124  QQWTGSEETVRLLDLGEKEYFRNVPHSRRVEEYENLFEKLNEKHPDMDRTWRDFPGVWQW  183

Query  195  GITDADLESKASELGFKLLYKEDCRGFGWLPNIQNRAFLFARQ  237
            GITDADLE+K S+LGFKL+YK+DC  FG L N +N+AF+F R+
Sbjct  184  GITDADLEAKVSQLGFKLVYKKDCGRFGRLRNFRNQAFIFTRE  226


>gi|168479938|dbj|BAG11526.1| putative methyltransferase [Mycobacterium intracellulare]
Length=251

 Score =  324 bits (831),  Expect = 6e-87, Method: Compositional matrix adjust.
 Identities = 149/224 (67%), Positives = 182/224 (82%), Gaps = 0/224 (0%)

Query  13   LVRGKINLIDRAFTSCRIESFADLGAVWGVEGAYTFRALDKYPVKEAVLVDGRITPTVAA  72
            ++R K+++ID AF+S  +ESFADLG VWGVEGAYTF ALDK+ +K A LVD  +TPTV  
Sbjct  28   ILRDKLDMIDHAFSSLGVESFADLGGVWGVEGAYTFHALDKHEIKAAALVDTHLTPTVVD  87

Query  73   RANSYPQLRVIEGNFGDQEIADKVGNVDALFLFDVLLHQVSPDWDTILDMYAKNVRCLLI  132
            RA SYPQLR+I GNFGDQ +AD+VG+VDA+FLFDVLLHQVSP+WD++L MYAKN R L++
Sbjct  88   RAKSYPQLRLINGNFGDQNVADEVGDVDAIFLFDVLLHQVSPNWDSVLKMYAKNARVLVV  147

Query  133  YNQQWIGSTTTVRLLDLGEKHYFRNVPHSKLNKAYRDLFQKLDKKHPDHDKPWRDIPDIW  192
            YNQQW GS  TVRLLDLGE+ YFRNVPH +  K YR+LF+KLD+KHPDHD+ WRD+  IW
Sbjct  148  YNQQWTGSDGTVRLLDLGEEEYFRNVPHPRYRKPYRNLFEKLDEKHPDHDRAWRDVHHIW  207

Query  193  QWGITDADLESKASELGFKLLYKEDCRGFGWLPNIQNRAFLFAR  236
            QWGITD DLE+  + LGF L YK++C  FG L N  NRAF+F+R
Sbjct  208  QWGITDDDLEAAVARLGFDLKYKKECGRFGRLANFTNRAFIFSR  251


>gi|218778897|ref|YP_002430215.1| hypothetical protein Dalk_1044 [Desulfatibacillum alkenivorans 
AK-01]
 gi|218760281|gb|ACL02747.1| conserved hypothetical protein [Desulfatibacillum alkenivorans 
AK-01]
Length=242

 Score =  224 bits (570),  Expect = 1e-56, Method: Compositional matrix adjust.
 Identities = 113/239 (48%), Positives = 152/239 (64%), Gaps = 2/239 (0%)

Query  1    MMLDRLRQGGYWLVRGKINLIDRAF--TSCRIESFADLGAVWGVEGAYTFRALDKYPVKE  58
            M L +  +  +  V  K  +ID A    S    SFADLG +W V+G YTF A + + V++
Sbjct  1    MSLYKNLKPAHLTVLDKKEIIDYALGRLSPSPCSFADLGGIWDVDGEYTFHAFENHDVEK  60

Query  59   AVLVDGRITPTVAARANSYPQLRVIEGNFGDQEIADKVGNVDALFLFDVLLHQVSPDWDT  118
            A LVD   T    A+A   P L++I+ NFG  E+ +K+G VDA+F+FDVLLHQVSPDWD 
Sbjct  61   AFLVDTDFTDKALAKAEKRPALQIIQDNFGRPEVVEKIGPVDAVFMFDVLLHQVSPDWDR  120

Query  119  ILDMYAKNVRCLLIYNQQWIGSTTTVRLLDLGEKHYFRNVPHSKLNKAYRDLFQKLDKKH  178
            IL+MY++   C +I+NQQW     TVRLLDLGEK YF NVPH   +  Y+ LF +LD  H
Sbjct  121  ILEMYSRICSCFVIFNQQWTRGDHTVRLLDLGEKEYFANVPHDPEHPNYKGLFDRLDDMH  180

Query  179  PDHDKPWRDIPDIWQWGITDADLESKASELGFKLLYKEDCRGFGWLPNIQNRAFLFARQ  237
            P H +  RDI +IWQWGI+D DL +K   +GF L Y ++C  F  L +  N AF+F+++
Sbjct  181  PQHRRRIRDIHNIWQWGISDKDLIAKMEAMGFGLQYYKNCGQFQKLEHFYNHAFVFSKR  239


>gi|196016354|ref|XP_002118030.1| hypothetical protein TRIADDRAFT_62058 [Trichoplax adhaerens]
 gi|190579417|gb|EDV19513.1| hypothetical protein TRIADDRAFT_62058 [Trichoplax adhaerens]
Length=1314

 Score = 37.7 bits (86),  Expect = 1.3, Method: Composition-based stats.
 Identities = 28/108 (26%), Positives = 52/108 (49%), Gaps = 13/108 (12%)

Query  90   QEIADKVGNVDALFLFDVL-----LHQVSPDWDTILDMYAKNV----RCLLIYNQQWIGS  140
            +EIA+K+   D + + + L     + QV  DW+  L+ Y K+V    RC++ YN     S
Sbjct  46   REIAEKLK--DEMMIAESLHRYGDIKQVERDWNEALNSYMKSVDIKLRCIVEYNPSIANS  103

Query  141  TTTVRLLDLGEKHYFRNVPHSKLNKAYRDLFQKLDKKHPDHDKPWRDI  188
               + ++   + +Y   +  S L K+       LD+ HPD  + + ++
Sbjct  104  YNEIGIIYYDQGNYKEAI--SMLEKSLNIRLSILDRHHPDITRSYNNV  149


>gi|320161130|ref|YP_004174354.1| putative oxidoreductase [Anaerolinea thermophila UNI-1]
 gi|319994983|dbj|BAJ63754.1| putative oxidoreductase [Anaerolinea thermophila UNI-1]
Length=261

 Score = 37.4 bits (85),  Expect = 1.7, Method: Compositional matrix adjust.
 Identities = 36/128 (29%), Positives = 60/128 (47%), Gaps = 15/128 (11%)

Query  120  LDMYAKNVRCLLIYNQQWIGSTTTVRLLDLGEK---HYFRN-VPHSKLNKAYRDLFQKLD  175
            L    KN+  L+  + + IG    +R  +LG     +Y RN  P  ++    R++ +K+ 
Sbjct  8    LPFLEKNI--LVTGSGRGIGRAIALRFAELGANVVINYHRNETPAQEVANQIREMGRKVL  65

Query  176  KKHPDHDKPWRDIPDIW-----QWGITDADLESKASELGF-KLLYKEDCRGFGWLPNIQN  229
                +  KP  DI  ++     +WG  D  + + AS  GF +   ++   G+ W  N+  
Sbjct  66   VIRANLAKP-EDIDLLFDSIEQEWGSLDGFISNAAS--GFNRPALQQKVTGWDWTMNVNA  122

Query  230  RAFLFARQ  237
            RAFLFA Q
Sbjct  123  RAFLFATQ  130


>gi|341875557|gb|EGT31492.1| hypothetical protein CAEBREN_06106 [Caenorhabditis brenneri]
Length=1115

 Score = 37.0 bits (84),  Expect = 2.7, Method: Compositional matrix adjust.
 Identities = 19/66 (29%), Positives = 39/66 (60%), Gaps = 3/66 (4%)

Query  146   LLDLGEKHYFRNVPHSKLNKAYRDLFQKLDKKHPDH-DKPWRDIPDIWQWGITDADLESK  204
             +L+  ++ YF  + H K  +  ++++++L K  P   +K  R++ D+ Q G T  DL+++
Sbjct  972   ILENSQQSYF--IDHEKFEELKKEIWKELAKNAPKQLEKKKREVQDVGQNGFTKKDLKNQ  1029

Query  205   ASELGF  210
               +LGF
Sbjct  1030  LHQLGF  1035


>gi|296188633|ref|ZP_06857021.1| membrane family protein [Clostridium carboxidivorans P7]
 gi|296046897|gb|EFG86343.1| membrane family protein [Clostridium carboxidivorans P7]
Length=291

 Score = 36.6 bits (83),  Expect = 3.4, Method: Compositional matrix adjust.
 Identities = 27/75 (36%), Positives = 31/75 (42%), Gaps = 16/75 (21%)

Query  4   DRLRQGGYWLVRGKINLIDRAFTSCRIESFADLGAVWGVEGAYTFRALDKYPVKEAVLVD  63
            RL +GG WLV G + LI   F +  I SFA   AV+                K   LVD
Sbjct  32  GRLEEGGNWLVYGIVGLIANFFDTLGIGSFAPTTAVY----------------KFLKLVD  75

Query  64  GRITPTVAARANSYP  78
            RI P     AN  P
Sbjct  76  DRIIPGTLNVANCVP  90


>gi|225320663|dbj|BAH29727.1| UDP-glucose 4-epimerase [Dicyema japonicum]
Length=341

 Score = 36.6 bits (83),  Expect = 3.5, Method: Compositional matrix adjust.
 Identities = 29/98 (30%), Positives = 47/98 (48%), Gaps = 12/98 (12%)

Query  83   IEGNFGDQEIADKVGNVDALFLFDVLLHQVSPDWDTILDMYAKNVRCLLIYNQQWIGSTT  142
            IEG+  DQEI +K+ + +++F    ++H              ++VR  L Y Q  +G   
Sbjct  56   IEGDINDQEILNKIFSENSIF---SVIHLAGS------KAVGESVRMPLKYYQNNVGGAM  106

Query  143  TVRLLDLGEKHYFRNVPHSKLNKAYRD-LFQKLDKKHP  179
            T  LL + + H  RN   S     Y D ++  +D+KHP
Sbjct  107  T--LLKVMDDHGVRNFIFSSSATVYGDPVYLPIDEKHP  142


>gi|255524832|ref|ZP_05391782.1| conserved hypothetical protein [Clostridium carboxidivorans P7]
 gi|255511499|gb|EET87789.1| conserved hypothetical protein [Clostridium carboxidivorans P7]
Length=266

 Score = 36.6 bits (83),  Expect = 3.5, Method: Compositional matrix adjust.
 Identities = 27/75 (36%), Positives = 31/75 (42%), Gaps = 16/75 (21%)

Query  4   DRLRQGGYWLVRGKINLIDRAFTSCRIESFADLGAVWGVEGAYTFRALDKYPVKEAVLVD  63
            RL +GG WLV G + LI   F +  I SFA   AV+                K   LVD
Sbjct  7   GRLEEGGNWLVYGIVGLIANFFDTLGIGSFAPTTAVY----------------KFLKLVD  50

Query  64  GRITPTVAARANSYP  78
            RI P     AN  P
Sbjct  51  DRIIPGTLNVANCVP  65


>gi|326528779|dbj|BAJ97411.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326534194|dbj|BAJ89447.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length=390

 Score = 35.0 bits (79),  Expect = 9.8, Method: Compositional matrix adjust.
 Identities = 24/92 (27%), Positives = 48/92 (53%), Gaps = 14/92 (15%)

Query  100  DALFLFDVLLHQV-SPDWDTILDMYAKNVRCLLIYNQQWIGSTTTVRLLDLGEKHYFRNV  158
            D+ F F V+ H   + D+DT L +Y +      I  + WI   +T+++L  G        
Sbjct  308  DSNFYFTVIFHLCKAGDFDTALSVYNE------IAPRNWIPCFSTMKMLVNGL------A  355

Query  159  PHSKLNKAYRDLFQKLDKKHPDHDKPWRDIPD  190
              S++++A + + +K+ +K PD D  W+++ +
Sbjct  356  GSSRIDEA-KGIIEKMKEKFPDRDAGWKEVEE  386



Lambda     K      H
   0.324    0.141    0.453 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 322714888716


  Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
    Posted date:  Sep 5, 2011  4:36 AM
  Number of letters in database: 5,219,829,388
  Number of sequences in database:  15,229,318



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40