BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv3531c Length=375 Score E Sequences producing significant alignments: (Bits) Value gi|15610667|ref|NP_218048.1| hypothetical protein Rv3531c [Mycob... 771 0.0 gi|289440960|ref|ZP_06430704.1| hypothetical protein TBLG_01703 ... 769 0.0 gi|289759687|ref|ZP_06519065.1| conserved hypothetical protein [... 769 0.0 gi|240172365|ref|ZP_04751024.1| hypothetical protein MkanA1_2382... 703 0.0 gi|296166561|ref|ZP_06848991.1| conserved hypothetical protein [... 700 0.0 gi|41406633|ref|NP_959469.1| hypothetical protein MAP0535 [Mycob... 692 0.0 gi|254773586|ref|ZP_05215102.1| hypothetical protein MaviaA2_027... 691 0.0 gi|183984987|ref|YP_001853278.1| hypothetical protein MMAR_5019 ... 688 0.0 gi|118619278|ref|YP_907610.1| hypothetical protein MUL_4093 [Myc... 683 0.0 gi|342862264|ref|ZP_08718906.1| hypothetical protein MCOL_25361 ... 667 0.0 gi|254822614|ref|ZP_05227615.1| hypothetical protein MintA_21974... 657 0.0 gi|333992312|ref|YP_004524926.1| hypothetical protein JDM601_367... 653 0.0 gi|118472718|ref|YP_890158.1| hypothetical protein MSMEG_5932 [M... 647 0.0 gi|167969145|ref|ZP_02551422.1| hypothetical protein MtubH3_1437... 634 6e-180 gi|120406177|ref|YP_956006.1| hypothetical protein Mvan_5229 [My... 630 1e-178 gi|108801610|ref|YP_641807.1| hypothetical protein Mmcs_4647 [My... 628 5e-178 gi|126437594|ref|YP_001073285.1| hypothetical protein Mjls_5030 ... 625 4e-177 gi|145222121|ref|YP_001132799.1| hypothetical protein Mflv_1529 ... 620 1e-175 gi|120405779|ref|YP_955608.1| hypothetical protein Mvan_4829 [My... 584 6e-165 gi|169631257|ref|YP_001704906.1| hypothetical protein MAB_4179c ... 560 1e-157 gi|325673548|ref|ZP_08153239.1| hypothetical protein HMPREF0724_... 515 4e-144 gi|312139147|ref|YP_004006483.1| hypothetical protein REQ_17300 ... 514 1e-143 gi|296141273|ref|YP_003648516.1| hypothetical protein Tpau_3599 ... 508 7e-142 gi|111018521|ref|YP_701493.1| hypothetical protein RHA1_ro01521 ... 505 4e-141 gi|226360640|ref|YP_002778418.1| hypothetical protein ROP_12260 ... 502 4e-140 gi|229489992|ref|ZP_04383845.1| conserved hypothetical protein [... 499 4e-139 gi|226307426|ref|YP_002767386.1| hypothetical protein RER_39390 ... 497 1e-138 gi|169631048|ref|YP_001704697.1| hypothetical protein MAB_3969 [... 494 1e-137 gi|54024426|ref|YP_118668.1| hypothetical protein nfa24570 [Noca... 491 6e-137 gi|269126970|ref|YP_003300340.1| hypothetical protein Tcur_2756 ... 463 2e-128 gi|302527705|ref|ZP_07280047.1| conserved hypothetical protein [... 446 3e-123 gi|326382884|ref|ZP_08204574.1| hypothetical protein SCNU_08093 ... 442 3e-122 gi|343925874|ref|ZP_08765389.1| hypothetical protein GOALK_050_0... 430 2e-118 gi|300784753|ref|YP_003765044.1| hypothetical protein AMED_2848 ... 426 3e-117 gi|159038407|ref|YP_001537660.1| hypothetical protein Sare_2834 ... 425 7e-117 gi|145595162|ref|YP_001159459.1| hypothetical protein Strop_2637... 414 2e-113 gi|262200920|ref|YP_003272128.1| hypothetical protein Gbro_0923 ... 413 2e-113 gi|326384573|ref|ZP_08206252.1| hypothetical protein SCNU_16613 ... 405 7e-111 gi|319948612|ref|ZP_08022736.1| hypothetical protein ES5_04498 [... 375 7e-102 gi|326331631|ref|ZP_08197919.1| hypothetical protein NBCG_03070 ... 350 2e-94 gi|119718590|ref|YP_925555.1| hypothetical protein Noca_4371 [No... 350 2e-94 gi|329895450|ref|ZP_08271031.1| hypothetical protein IMCC3088_14... 157 3e-36 gi|148556194|ref|YP_001263776.1| hypothetical protein Swit_3292 ... 150 5e-34 gi|312197133|ref|YP_004017194.1| hypothetical protein FraEuI1c_3... 137 4e-30 gi|183980927|ref|YP_001849218.1| hypothetical protein MMAR_0906 ... 135 1e-29 gi|240170323|ref|ZP_04748982.1| hypothetical protein MkanA1_1350... 134 3e-29 gi|118616462|ref|YP_904794.1| hypothetical protein MUL_0659 [Myc... 131 2e-28 gi|329894123|ref|ZP_08270108.1| hypothetical protein IMCC3088_23... 129 6e-28 gi|342859772|ref|ZP_08716425.1| hypothetical protein MCOL_12873 ... 128 1e-27 gi|296165150|ref|ZP_06847699.1| conserved hypothetical protein [... 128 2e-27 >gi|15610667|ref|NP_218048.1| hypothetical protein Rv3531c [Mycobacterium tuberculosis H37Rv] gi|15843144|ref|NP_338181.1| hypothetical protein MT3634 [Mycobacterium tuberculosis CDC1551] gi|31794707|ref|NP_857200.1| hypothetical protein Mb3561c [Mycobacterium bovis AF2122/97] 68 more sequence titles Length=375 Score = 771 bits (1992), Expect = 0.0, Method: Compositional matrix adjust. Identities = 374/375 (99%), Positives = 375/375 (100%), Gaps = 0/375 (0%) Query 1 VYSDPLREAIAEAEQLVAAAPHIETEADLLEGLQYLAGCIAGCMHLAFDYERDHPFLQSG 60 +YSDPLREAIAEAEQLVAAAPHIETEADLLEGLQYLAGCIAGCMHLAFDYERDHPFLQSG Sbjct 1 MYSDPLREAIAEAEQLVAAAPHIETEADLLEGLQYLAGCIAGCMHLAFDYERDHPFLQSG 60 Query 61 TGPFTKMGLDNPDTLYFGTRLQANRDYVVSGRRGTTTDLSFQLLGGEYTDYNVPASQAAF 120 TGPFTKMGLDNPDTLYFGTRLQANRDYVVSGRRGTTTDLSFQLLGGEYTDYNVPASQAAF Sbjct 61 TGPFTKMGLDNPDTLYFGTRLQANRDYVVSGRRGTTTDLSFQLLGGEYTDYNVPASQAAF 120 Query 121 DDRELDIAADGSFEWRLRPSAPGQLVIREVYGDWSQQRGTLAIARLDTVGTAPPPLTREL 180 DDRELDIAADGSFEWRLRPSAPGQLVIREVYGDWSQQRGTLAIARLDTVGTAPPPLTREL Sbjct 121 DDRELDIAADGSFEWRLRPSAPGQLVIREVYGDWSQQRGTLAIARLDTVGTAPPPLTREL 180 Query 181 MEKRYATAGSQLVNRVKTWLQFPQWFYLNIPVNTMVAPRLTPGGLATQYSSAGHFELRPG 240 MEKRYATAGSQLVNRVKTWLQFPQWFYLNIPVNTMVAPRLTPGGLATQYSSAGHFELRPG Sbjct 181 MEKRYATAGSQLVNRVKTWLQFPQWFYLNIPVNTMVAPRLTPGGLATQYSSAGHFELRPG 240 Query 241 QALVITVPVSDAPYLGFQLGSMWYISLDYINHQTSLNASQAQADPDGKVRIVVAEQNPGV 300 QALVITVPVSDAPYLGFQLGSMWYISLDYINHQTSLNASQAQADPDGKVRIVVAEQNPGV Sbjct 241 QALVITVPVSDAPYLGFQLGSMWYISLDYINHQTSLNASQAQADPDGKVRIVVAEQNPGV 300 Query 301 TNWVETLGHRRGFLQFRWQRVSRELTEADGPTVELVDFDAIPAALPHYQHNKISEDDWRA 360 TNWVETLGHRRGFLQFRWQRVSRELTEADGPTVELVDFDAIPAALPHYQHNKISEDDWRA Sbjct 301 TNWVETLGHRRGFLQFRWQRVSRELTEADGPTVELVDFDAIPAALPHYQHNKISEDDWRA 360 Query 361 RIALRQRQIATRMLG 375 RIALRQRQIATRMLG Sbjct 361 RIALRQRQIATRMLG 375 >gi|289440960|ref|ZP_06430704.1| hypothetical protein TBLG_01703 [Mycobacterium tuberculosis T46] gi|289571772|ref|ZP_06451999.1| hypothetical protein TBJG_02660 [Mycobacterium tuberculosis T17] gi|289752244|ref|ZP_06511622.1| hypothetical protein TBDG_03489 [Mycobacterium tuberculosis T92] gi|289413879|gb|EFD11119.1| hypothetical protein TBLG_01703 [Mycobacterium tuberculosis T46] gi|289545526|gb|EFD49174.1| hypothetical protein TBJG_02660 [Mycobacterium tuberculosis T17] gi|289692831|gb|EFD60260.1| hypothetical protein TBDG_03489 [Mycobacterium tuberculosis T92] Length=375 Score = 769 bits (1986), Expect = 0.0, Method: Compositional matrix adjust. Identities = 373/375 (99%), Positives = 374/375 (99%), Gaps = 0/375 (0%) Query 1 VYSDPLREAIAEAEQLVAAAPHIETEADLLEGLQYLAGCIAGCMHLAFDYERDHPFLQSG 60 +YSDPLREAIAEAEQLVAAAPHIETEADLLEGLQYLAGCIAGCMHLAFDYERDHPFL SG Sbjct 1 MYSDPLREAIAEAEQLVAAAPHIETEADLLEGLQYLAGCIAGCMHLAFDYERDHPFLHSG 60 Query 61 TGPFTKMGLDNPDTLYFGTRLQANRDYVVSGRRGTTTDLSFQLLGGEYTDYNVPASQAAF 120 TGPFTKMGLDNPDTLYFGTRLQANRDYVVSGRRGTTTDLSFQLLGGEYTDYNVPASQAAF Sbjct 61 TGPFTKMGLDNPDTLYFGTRLQANRDYVVSGRRGTTTDLSFQLLGGEYTDYNVPASQAAF 120 Query 121 DDRELDIAADGSFEWRLRPSAPGQLVIREVYGDWSQQRGTLAIARLDTVGTAPPPLTREL 180 DDRELDIAADGSFEWRLRPSAPGQLVIREVYGDWSQQRGTLAIARLDTVGTAPPPLTREL Sbjct 121 DDRELDIAADGSFEWRLRPSAPGQLVIREVYGDWSQQRGTLAIARLDTVGTAPPPLTREL 180 Query 181 MEKRYATAGSQLVNRVKTWLQFPQWFYLNIPVNTMVAPRLTPGGLATQYSSAGHFELRPG 240 MEKRYATAGSQLVNRVKTWLQFPQWFYLNIPVNTMVAPRLTPGGLATQYSSAGHFELRPG Sbjct 181 MEKRYATAGSQLVNRVKTWLQFPQWFYLNIPVNTMVAPRLTPGGLATQYSSAGHFELRPG 240 Query 241 QALVITVPVSDAPYLGFQLGSMWYISLDYINHQTSLNASQAQADPDGKVRIVVAEQNPGV 300 QALVITVPVSDAPYLGFQLGSMWYISLDYINHQTSLNASQAQADPDGKVRIVVAEQNPGV Sbjct 241 QALVITVPVSDAPYLGFQLGSMWYISLDYINHQTSLNASQAQADPDGKVRIVVAEQNPGV 300 Query 301 TNWVETLGHRRGFLQFRWQRVSRELTEADGPTVELVDFDAIPAALPHYQHNKISEDDWRA 360 TNWVETLGHRRGFLQFRWQRVSRELTEADGPTVELVDFDAIPAALPHYQHNKISEDDWRA Sbjct 301 TNWVETLGHRRGFLQFRWQRVSRELTEADGPTVELVDFDAIPAALPHYQHNKISEDDWRA 360 Query 361 RIALRQRQIATRMLG 375 RIALRQRQIATRMLG Sbjct 361 RIALRQRQIATRMLG 375 >gi|289759687|ref|ZP_06519065.1| conserved hypothetical protein [Mycobacterium tuberculosis T85] gi|294993649|ref|ZP_06799340.1| hypothetical protein Mtub2_03851 [Mycobacterium tuberculosis 210] gi|289715251|gb|EFD79263.1| conserved hypothetical protein [Mycobacterium tuberculosis T85] gi|326905371|gb|EGE52304.1| hypothetical protein TBPG_03322 [Mycobacterium tuberculosis W-148] gi|339296350|gb|AEJ48461.1| hypothetical protein CCDC5079_3272 [Mycobacterium tuberculosis CCDC5079] gi|339299951|gb|AEJ52061.1| hypothetical protein CCDC5180_3224 [Mycobacterium tuberculosis CCDC5180] Length=375 Score = 769 bits (1985), Expect = 0.0, Method: Compositional matrix adjust. Identities = 373/375 (99%), Positives = 374/375 (99%), Gaps = 0/375 (0%) Query 1 VYSDPLREAIAEAEQLVAAAPHIETEADLLEGLQYLAGCIAGCMHLAFDYERDHPFLQSG 60 +YSDPLREAIAEAEQLVAAAPHIETEADLLEGLQYLAGCIAGCMHLAFDYERDHPFLQSG Sbjct 1 MYSDPLREAIAEAEQLVAAAPHIETEADLLEGLQYLAGCIAGCMHLAFDYERDHPFLQSG 60 Query 61 TGPFTKMGLDNPDTLYFGTRLQANRDYVVSGRRGTTTDLSFQLLGGEYTDYNVPASQAAF 120 TGPFTKMGLDNPDTLYFGTRLQANRDYVVSGRRGTTTDLSFQLLGGEYTDYNVPASQAAF Sbjct 61 TGPFTKMGLDNPDTLYFGTRLQANRDYVVSGRRGTTTDLSFQLLGGEYTDYNVPASQAAF 120 Query 121 DDRELDIAADGSFEWRLRPSAPGQLVIREVYGDWSQQRGTLAIARLDTVGTAPPPLTREL 180 DDRELDIAADGSFEWRLRPSAPGQLVIREVYGDWSQQRGTLAIARLDTVGTAPPPLTREL Sbjct 121 DDRELDIAADGSFEWRLRPSAPGQLVIREVYGDWSQQRGTLAIARLDTVGTAPPPLTREL 180 Query 181 MEKRYATAGSQLVNRVKTWLQFPQWFYLNIPVNTMVAPRLTPGGLATQYSSAGHFELRPG 240 MEKRYATAGSQLVNRVKTWLQFPQWFYLNIPVNTMVAPRLTPGGLATQYSSAGHFELRPG Sbjct 181 MEKRYATAGSQLVNRVKTWLQFPQWFYLNIPVNTMVAPRLTPGGLATQYSSAGHFELRPG 240 Query 241 QALVITVPVSDAPYLGFQLGSMWYISLDYINHQTSLNASQAQADPDGKVRIVVAEQNPGV 300 QALVITVPVSDAPYLGFQLGSMWYISLDYINHQTSLNASQAQADPDGKVRIVVAEQNPGV Sbjct 241 QALVITVPVSDAPYLGFQLGSMWYISLDYINHQTSLNASQAQADPDGKVRIVVAEQNPGV 300 Query 301 TNWVETLGHRRGFLQFRWQRVSRELTEADGPTVELVDFDAIPAALPHYQHNKISEDDWRA 360 TNWVETLGHRRG LQFRWQRVSRELTEADGPTVELVDFDAIPAALPHYQHNKISEDDWRA Sbjct 301 TNWVETLGHRRGLLQFRWQRVSRELTEADGPTVELVDFDAIPAALPHYQHNKISEDDWRA 360 Query 361 RIALRQRQIATRMLG 375 RIALRQRQIATRMLG Sbjct 361 RIALRQRQIATRMLG 375 >gi|240172365|ref|ZP_04751024.1| hypothetical protein MkanA1_23823 [Mycobacterium kansasii ATCC 12478] Length=379 Score = 703 bits (1814), Expect = 0.0, Method: Compositional matrix adjust. Identities = 334/374 (90%), Positives = 357/374 (96%), Gaps = 0/374 (0%) Query 2 YSDPLREAIAEAEQLVAAAPHIETEADLLEGLQYLAGCIAGCMHLAFDYERDHPFLQSGT 61 +S PL EAIAEAE+LV AAPHIETEADLLEGLQYLAGC+A CMHLAFDYERDHPFLQSGT Sbjct 6 FSGPLTEAIAEAEKLVEAAPHIETEADLLEGLQYLAGCVASCMHLAFDYERDHPFLQSGT 65 Query 62 GPFTKMGLDNPDTLYFGTRLQANRDYVVSGRRGTTTDLSFQLLGGEYTDYNVPASQAAFD 121 GPFTKMGLDNPDTLYFGTR+Q +RDYVV+GRRGTTTDLSFQ+LGGEYTD NVPASQ AFD Sbjct 66 GPFTKMGLDNPDTLYFGTRVQPDRDYVVTGRRGTTTDLSFQVLGGEYTDDNVPASQIAFD 125 Query 122 DRELDIAADGSFEWRLRPSAPGQLVIREVYGDWSQQRGTLAIARLDTVGTAPPPLTRELM 181 DRELDIA DG+F W+LRP++PGQLVIREVYGDWSQQRGTLA++RLDT GTAPPPL+R+ + Sbjct 126 DRELDIAPDGTFHWQLRPTSPGQLVIREVYGDWSQQRGTLAVSRLDTAGTAPPPLSRQTI 185 Query 182 EKRYATAGSQLVNRVKTWLQFPQWFYLNIPVNTMVAPRLTPGGLATQYSSAGHFELRPGQ 241 EKRYATAG QLVNRVKTWLQFPQWFYLNIPVNTMVAPRLTPGGLATQYSSAGHFELRP Q Sbjct 186 EKRYATAGKQLVNRVKTWLQFPQWFYLNIPVNTMVAPRLTPGGLATQYSSAGHFELRPDQ 245 Query 242 ALVITVPVSDAPYLGFQLGSMWYISLDYINHQTSLNASQAQADPDGKVRIVVAEQNPGVT 301 ALVITVPVSDAPYLGFQLGSMWYISLDYINHQTSLN SQAQADPDGKVRIVVA+QNPGVT Sbjct 246 ALVITVPVSDAPYLGFQLGSMWYISLDYINHQTSLNNSQAQADPDGKVRIVVADQNPGVT 305 Query 302 NWVETLGHRRGFLQFRWQRVSRELTEADGPTVELVDFDAIPAALPHYQHNKISEDDWRAR 361 NWVET+GHRRGFLQFRWQRVSR+LTEADGPTVELV+FDAIPA LP+ +HNKISEDDWR+R Sbjct 306 NWVETVGHRRGFLQFRWQRVSRQLTEADGPTVELVNFDAIPAKLPYLEHNKISEDDWRSR 365 Query 362 IALRQRQIATRMLG 375 IALRQRQIA RMLG Sbjct 366 IALRQRQIAARMLG 379 >gi|296166561|ref|ZP_06848991.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295898047|gb|EFG77623.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length=375 Score = 700 bits (1807), Expect = 0.0, Method: Compositional matrix adjust. Identities = 331/375 (89%), Positives = 358/375 (96%), Gaps = 0/375 (0%) Query 1 VYSDPLREAIAEAEQLVAAAPHIETEADLLEGLQYLAGCIAGCMHLAFDYERDHPFLQSG 60 +++DPL AIAEAE+LVA AP IETEADLLEG+QYLAGCIAGCMHLAFDY+RDHPFLQSG Sbjct 1 MFTDPLTSAIAEAEKLVADAPFIETEADLLEGMQYLAGCIAGCMHLAFDYDRDHPFLQSG 60 Query 61 TGPFTKMGLDNPDTLYFGTRLQANRDYVVSGRRGTTTDLSFQLLGGEYTDYNVPASQAAF 120 TGPFTKMGLDNPDTLYFGTR+ AN DYVV+GRRGTTTDLSFQLLGGEYTD NVPASQAAF Sbjct 61 TGPFTKMGLDNPDTLYFGTRVHANHDYVVTGRRGTTTDLSFQLLGGEYTDDNVPASQAAF 120 Query 121 DDRELDIAADGSFEWRLRPSAPGQLVIREVYGDWSQQRGTLAIARLDTVGTAPPPLTREL 180 DDREL+IAADGSFEWR+RP++PGQLVIREVYGDWS QRGTLAI+RLDT GTAPPPLTRE Sbjct 121 DDRELEIAADGSFEWRVRPTSPGQLVIREVYGDWSAQRGTLAISRLDTAGTAPPPLTRET 180 Query 181 MEKRYATAGSQLVNRVKTWLQFPQWFYLNIPVNTMVAPRLTPGGLATQYSSAGHFELRPG 240 +EKRYATAG QLVNRVKTWLQFPQWFYL++PVNTMVAPRLTPGGLATQYSS GH++LRP Sbjct 181 IEKRYATAGKQLVNRVKTWLQFPQWFYLDLPVNTMVAPRLTPGGLATQYSSVGHYDLRPD 240 Query 241 QALVITVPVSDAPYLGFQLGSMWYISLDYINHQTSLNASQAQADPDGKVRIVVAEQNPGV 300 QALVIT+PVSDAPYLGFQLGS+WYISLDYINHQTSLN +QAQADPDGKVRIVVA++NPGV Sbjct 241 QALVITIPVSDAPYLGFQLGSLWYISLDYINHQTSLNNTQAQADPDGKVRIVVADRNPGV 300 Query 301 TNWVETLGHRRGFLQFRWQRVSRELTEADGPTVELVDFDAIPAALPHYQHNKISEDDWRA 360 TNWVETLGHRRG LQFRWQRVSRELTEADGPTVELVDFDAIPA LPHY+HNKIS+D+WRA Sbjct 301 TNWVETLGHRRGILQFRWQRVSRELTEADGPTVELVDFDAIPAKLPHYEHNKISDDEWRA 360 Query 361 RIALRQRQIATRMLG 375 RIALRQ+QIA RMLG Sbjct 361 RIALRQQQIAARMLG 375 >gi|41406633|ref|NP_959469.1| hypothetical protein MAP0535 [Mycobacterium avium subsp. paratuberculosis K-10] gi|118466162|ref|YP_879909.1| hypothetical protein MAV_0629 [Mycobacterium avium 104] gi|41394982|gb|AAS02852.1| hypothetical protein MAP_0535 [Mycobacterium avium subsp. paratuberculosis K-10] gi|118167449|gb|ABK68346.1| conserved hypothetical protein [Mycobacterium avium 104] gi|336458422|gb|EGO37396.1| hypothetical protein MAPs_13170 [Mycobacterium avium subsp. paratuberculosis S397] Length=375 Score = 692 bits (1786), Expect = 0.0, Method: Compositional matrix adjust. Identities = 328/375 (88%), Positives = 354/375 (95%), Gaps = 0/375 (0%) Query 1 VYSDPLREAIAEAEQLVAAAPHIETEADLLEGLQYLAGCIAGCMHLAFDYERDHPFLQSG 60 ++SDPL AIAEAE LVAAAPHIETEADLLEGLQYLAGCI+ C+HLA DYERDHPFLQSG Sbjct 1 MFSDPLTSAIAEAENLVAAAPHIETEADLLEGLQYLAGCISACIHLAVDYERDHPFLQSG 60 Query 61 TGPFTKMGLDNPDTLYFGTRLQANRDYVVSGRRGTTTDLSFQLLGGEYTDYNVPASQAAF 120 TGPFTKMGLDNPDTLYFGTR+ A DYVV+GRRGTTTDLSFQLLGGEYTD NVPASQAAF Sbjct 61 TGPFTKMGLDNPDTLYFGTRVHAGYDYVVTGRRGTTTDLSFQLLGGEYTDDNVPASQAAF 120 Query 121 DDRELDIAADGSFEWRLRPSAPGQLVIREVYGDWSQQRGTLAIARLDTVGTAPPPLTREL 180 DDRELDIA DGSFEWR+RP++ GQLVIREVYGDW+ QRGTLAIAR DT GTAPPPLTRE Sbjct 121 DDRELDIAPDGSFEWRVRPTSNGQLVIREVYGDWAAQRGTLAIAREDTAGTAPPPLTRET 180 Query 181 MEKRYATAGSQLVNRVKTWLQFPQWFYLNIPVNTMVAPRLTPGGLATQYSSAGHFELRPG 240 +EKRYATAG QLVNRVKTWLQFPQWFY NIPVNTMVAPRLTPGGLATQYSSAGH+ELRP Sbjct 181 IEKRYATAGKQLVNRVKTWLQFPQWFYFNIPVNTMVAPRLTPGGLATQYSSAGHYELRPD 240 Query 241 QALVITVPVSDAPYLGFQLGSMWYISLDYINHQTSLNASQAQADPDGKVRIVVAEQNPGV 300 QAL+IT+PV+DAPYLGFQLGS+WYISLDYINHQTSLN +QAQADPDGKVRIVVAEQNPGV Sbjct 241 QALLITIPVTDAPYLGFQLGSLWYISLDYINHQTSLNNTQAQADPDGKVRIVVAEQNPGV 300 Query 301 TNWVETLGHRRGFLQFRWQRVSRELTEADGPTVELVDFDAIPAALPHYQHNKISEDDWRA 360 TNWVET+GHR+GFLQFRWQRVSR+LTEADGPTVELVDFDA+PA LP+Y+HNKIS+D+WRA Sbjct 301 TNWVETVGHRKGFLQFRWQRVSRQLTEADGPTVELVDFDAVPAKLPYYEHNKISDDEWRA 360 Query 361 RIALRQRQIATRMLG 375 RIALRQ+QIA RMLG Sbjct 361 RIALRQQQIAARMLG 375 >gi|254773586|ref|ZP_05215102.1| hypothetical protein MaviaA2_02765 [Mycobacterium avium subsp. avium ATCC 25291] Length=375 Score = 691 bits (1782), Expect = 0.0, Method: Compositional matrix adjust. Identities = 326/375 (87%), Positives = 354/375 (95%), Gaps = 0/375 (0%) Query 1 VYSDPLREAIAEAEQLVAAAPHIETEADLLEGLQYLAGCIAGCMHLAFDYERDHPFLQSG 60 ++SDPL AIAEAE LVAAAPHIETEADLLEGLQYLAGCI+ C+HLA DYERDHPFLQSG Sbjct 1 MFSDPLTSAIAEAENLVAAAPHIETEADLLEGLQYLAGCISACIHLAVDYERDHPFLQSG 60 Query 61 TGPFTKMGLDNPDTLYFGTRLQANRDYVVSGRRGTTTDLSFQLLGGEYTDYNVPASQAAF 120 TGPFTKMGLDNPDTLYFGTR+ A DYVV+GRRGTTTDLSFQLLGGEYTD NVPASQAAF Sbjct 61 TGPFTKMGLDNPDTLYFGTRVHAGYDYVVTGRRGTTTDLSFQLLGGEYTDDNVPASQAAF 120 Query 121 DDRELDIAADGSFEWRLRPSAPGQLVIREVYGDWSQQRGTLAIARLDTVGTAPPPLTREL 180 DDRELDIA DGSFEWR+RP++ GQLVIREVYGDW+ QRGTLAIAR DT GTAPPPLTRE Sbjct 121 DDRELDIAPDGSFEWRVRPTSNGQLVIREVYGDWAAQRGTLAIAREDTAGTAPPPLTRET 180 Query 181 MEKRYATAGSQLVNRVKTWLQFPQWFYLNIPVNTMVAPRLTPGGLATQYSSAGHFELRPG 240 +EKRYATAG QLVNRVKTWLQFPQWFY NIPVNTMVAPRLTPGGLATQYSSAGH+EL+P Sbjct 181 IEKRYATAGKQLVNRVKTWLQFPQWFYFNIPVNTMVAPRLTPGGLATQYSSAGHYELQPD 240 Query 241 QALVITVPVSDAPYLGFQLGSMWYISLDYINHQTSLNASQAQADPDGKVRIVVAEQNPGV 300 QAL+IT+PV+DAPYLGFQLGS+WYISLDYINHQTSLN +QAQADPDGKVRIVVAEQNPGV Sbjct 241 QALLITIPVTDAPYLGFQLGSLWYISLDYINHQTSLNNTQAQADPDGKVRIVVAEQNPGV 300 Query 301 TNWVETLGHRRGFLQFRWQRVSRELTEADGPTVELVDFDAIPAALPHYQHNKISEDDWRA 360 TNWVET+GHR+GFLQFRWQRVSR+LTEADGPTVELVDFDA+PA LP+Y+HNKIS+D+WRA Sbjct 301 TNWVETVGHRKGFLQFRWQRVSRQLTEADGPTVELVDFDAVPAKLPYYEHNKISDDEWRA 360 Query 361 RIALRQRQIATRMLG 375 RIALRQ+Q+A RMLG Sbjct 361 RIALRQQQVAARMLG 375 >gi|183984987|ref|YP_001853278.1| hypothetical protein MMAR_5019 [Mycobacterium marinum M] gi|183178313|gb|ACC43423.1| conserved hypothetical protein [Mycobacterium marinum M] Length=377 Score = 688 bits (1775), Expect = 0.0, Method: Compositional matrix adjust. Identities = 327/373 (88%), Positives = 351/373 (95%), Gaps = 0/373 (0%) Query 3 SDPLREAIAEAEQLVAAAPHIETEADLLEGLQYLAGCIAGCMHLAFDYERDHPFLQSGTG 62 S PL EAIAEAE+LV AAPHIETEADLLEGLQYLAGCIAGC+HLAFDYERDHPFLQSGTG Sbjct 5 SQPLTEAIAEAEKLVTAAPHIETEADLLEGLQYLAGCIAGCLHLAFDYERDHPFLQSGTG 64 Query 63 PFTKMGLDNPDTLYFGTRLQANRDYVVSGRRGTTTDLSFQLLGGEYTDYNVPASQAAFDD 122 PFTKMGLDNPDTLYFGTR+ A+RDYVV G RGTTTDLSFQLLGGEYTD NVP SQAAFDD Sbjct 65 PFTKMGLDNPDTLYFGTRVHADRDYVVIGNRGTTTDLSFQLLGGEYTDNNVPVSQAAFDD 124 Query 123 RELDIAADGSFEWRLRPSAPGQLVIREVYGDWSQQRGTLAIARLDTVGTAPPPLTRELME 182 REL+IA+DGSF+WRLRP++ GQLVIREVY DWS QRGTLAI+RLDT GTAPPPLTRE M+ Sbjct 125 RELEIASDGSFQWRLRPTSNGQLVIREVYADWSAQRGTLAISRLDTAGTAPPPLTRETMQ 184 Query 183 KRYATAGSQLVNRVKTWLQFPQWFYLNIPVNTMVAPRLTPGGLATQYSSAGHFELRPGQA 242 KRY AG QLV+RVKTWLQFPQWFYLNIPVNTMVAPRLTPGGLATQYSSAGHF+LRP QA Sbjct 185 KRYTVAGKQLVDRVKTWLQFPQWFYLNIPVNTMVAPRLTPGGLATQYSSAGHFDLRPDQA 244 Query 243 LVITVPVSDAPYLGFQLGSMWYISLDYINHQTSLNASQAQADPDGKVRIVVAEQNPGVTN 302 LVITVPVSDAPYLGFQLGSMWYISLDYINHQTSLN SQAQADPDGKVRIVVA++NPGVTN Sbjct 245 LVITVPVSDAPYLGFQLGSMWYISLDYINHQTSLNNSQAQADPDGKVRIVVADRNPGVTN 304 Query 303 WVETLGHRRGFLQFRWQRVSRELTEADGPTVELVDFDAIPAALPHYQHNKISEDDWRARI 362 WVETLGHRRGFLQFRWQRVSR+LT+ADGP+VELVDFDA+ + LP+ +HNKISE+DWRARI Sbjct 305 WVETLGHRRGFLQFRWQRVSRQLTDADGPSVELVDFDAVGSVLPYLEHNKISEEDWRARI 364 Query 363 ALRQRQIATRMLG 375 ALRQ+QIA RMLG Sbjct 365 ALRQKQIAARMLG 377 >gi|118619278|ref|YP_907610.1| hypothetical protein MUL_4093 [Mycobacterium ulcerans Agy99] gi|118571388|gb|ABL06139.1| conserved hypothetical protein [Mycobacterium ulcerans Agy99] Length=377 Score = 683 bits (1762), Expect = 0.0, Method: Compositional matrix adjust. Identities = 325/373 (88%), Positives = 349/373 (94%), Gaps = 0/373 (0%) Query 3 SDPLREAIAEAEQLVAAAPHIETEADLLEGLQYLAGCIAGCMHLAFDYERDHPFLQSGTG 62 S PL AIAEAE+LV AAPHIETEADLLEGLQYLAGCIAGC+HLAFDYERDHPFLQSGTG Sbjct 5 SQPLTVAIAEAEKLVTAAPHIETEADLLEGLQYLAGCIAGCLHLAFDYERDHPFLQSGTG 64 Query 63 PFTKMGLDNPDTLYFGTRLQANRDYVVSGRRGTTTDLSFQLLGGEYTDYNVPASQAAFDD 122 PFTKMGLDNPDTLYFGTR+ A+RDYVV G RGTTTDLSFQLLGGEYTD NVP SQAAFDD Sbjct 65 PFTKMGLDNPDTLYFGTRVHADRDYVVIGNRGTTTDLSFQLLGGEYTDDNVPVSQAAFDD 124 Query 123 RELDIAADGSFEWRLRPSAPGQLVIREVYGDWSQQRGTLAIARLDTVGTAPPPLTRELME 182 REL+IA+DGSF+WRLRP++ GQLVIREVY DWS QRGTLAI+RLDT GTAPPPLTRE M+ Sbjct 125 RELEIASDGSFQWRLRPTSNGQLVIREVYADWSAQRGTLAISRLDTAGTAPPPLTRETMQ 184 Query 183 KRYATAGSQLVNRVKTWLQFPQWFYLNIPVNTMVAPRLTPGGLATQYSSAGHFELRPGQA 242 KRY AG QLV+RVKTWLQFPQWFYLNIPVNTMV PRLTPGGLATQYSSAGHF+LRP QA Sbjct 185 KRYTVAGKQLVDRVKTWLQFPQWFYLNIPVNTMVVPRLTPGGLATQYSSAGHFDLRPDQA 244 Query 243 LVITVPVSDAPYLGFQLGSMWYISLDYINHQTSLNASQAQADPDGKVRIVVAEQNPGVTN 302 LVITVPVSDAPYLGFQLGSMWYISLDYINHQTSLN SQAQADPDGKVRIVVA++NPGVTN Sbjct 245 LVITVPVSDAPYLGFQLGSMWYISLDYINHQTSLNNSQAQADPDGKVRIVVADRNPGVTN 304 Query 303 WVETLGHRRGFLQFRWQRVSRELTEADGPTVELVDFDAIPAALPHYQHNKISEDDWRARI 362 WVETLGHRRGFLQFRWQRVSR+LT+ADGP+VELVDFDA+ + LP+ +HNKISE+DWRARI Sbjct 305 WVETLGHRRGFLQFRWQRVSRQLTDADGPSVELVDFDAVGSVLPYLEHNKISEEDWRARI 364 Query 363 ALRQRQIATRMLG 375 ALRQ+QIA RMLG Sbjct 365 ALRQKQIAARMLG 377 >gi|342862264|ref|ZP_08718906.1| hypothetical protein MCOL_25361 [Mycobacterium colombiense CECT 3035] gi|342130342|gb|EGT83662.1| hypothetical protein MCOL_25361 [Mycobacterium colombiense CECT 3035] Length=375 Score = 667 bits (1721), Expect = 0.0, Method: Compositional matrix adjust. Identities = 317/375 (85%), Positives = 345/375 (92%), Gaps = 0/375 (0%) Query 1 VYSDPLREAIAEAEQLVAAAPHIETEADLLEGLQYLAGCIAGCMHLAFDYERDHPFLQSG 60 + SDPL AIAEAEQLVA AP IETEADLLEG+QYLAGCI+GC+HLA DY+RDHPFLQSG Sbjct 1 MISDPLTAAIAEAEQLVADAPFIETEADLLEGMQYLAGCISGCIHLAVDYDRDHPFLQSG 60 Query 61 TGPFTKMGLDNPDTLYFGTRLQANRDYVVSGRRGTTTDLSFQLLGGEYTDYNVPASQAAF 120 TGPFTKMGLDNPDTLYFGTR+ A +YVV+GRRGTTTDLSFQLLGGEYTD VP SQAAF Sbjct 61 TGPFTKMGLDNPDTLYFGTRVHAGHEYVVTGRRGTTTDLSFQLLGGEYTDDFVPVSQAAF 120 Query 121 DDRELDIAADGSFEWRLRPSAPGQLVIREVYGDWSQQRGTLAIARLDTVGTAPPPLTREL 180 DDREL+IA DGSFEWR+RP++PGQLVIREVYGDWS QRGTLAIAR DT GTAPPPLTR+L Sbjct 121 DDRELEIAPDGSFEWRVRPTSPGQLVIREVYGDWSAQRGTLAIARTDTAGTAPPPLTRQL 180 Query 181 MEKRYATAGSQLVNRVKTWLQFPQWFYLNIPVNTMVAPRLTPGGLATQYSSAGHFELRPG 240 +EKRYATA QLV RVKTWLQFPQWFYL++PVNTMV PRLTPGGLATQYSS GHF+LRP Sbjct 181 IEKRYATAAKQLVQRVKTWLQFPQWFYLDLPVNTMVPPRLTPGGLATQYSSVGHFDLRPD 240 Query 241 QALVITVPVSDAPYLGFQLGSMWYISLDYINHQTSLNASQAQADPDGKVRIVVAEQNPGV 300 QA+VIT+PVSDAPYLGFQLGS+WYISLDYINHQTSLN +QAQADPDGKVRIVVA+QNPGV Sbjct 241 QAMVITIPVSDAPYLGFQLGSLWYISLDYINHQTSLNNTQAQADPDGKVRIVVADQNPGV 300 Query 301 TNWVETLGHRRGFLQFRWQRVSRELTEADGPTVELVDFDAIPAALPHYQHNKISEDDWRA 360 TNWVETLGHRRGFLQFRWQRVSRELT+ADGPTVE+VD D +PAALP++ NKISEDDWRA Sbjct 301 TNWVETLGHRRGFLQFRWQRVSRELTDADGPTVEVVDIDKVPAALPYFDQNKISEDDWRA 360 Query 361 RIALRQRQIATRMLG 375 RIALR +QI RMLG Sbjct 361 RIALRHQQIQARMLG 375 >gi|254822614|ref|ZP_05227615.1| hypothetical protein MintA_21974 [Mycobacterium intracellulare ATCC 13950] Length=379 Score = 657 bits (1694), Expect = 0.0, Method: Compositional matrix adjust. Identities = 320/374 (86%), Positives = 346/374 (93%), Gaps = 0/374 (0%) Query 2 YSDPLREAIAEAEQLVAAAPHIETEADLLEGLQYLAGCIAGCMHLAFDYERDHPFLQSGT 61 +S PL AIAEAE+LVAAAPHIE+EADLLEGLQYLAGCIA C HLAFDY+RDHPFLQSGT Sbjct 6 FSGPLTHAIAEAEELVAAAPHIESEADLLEGLQYLAGCIAACTHLAFDYDRDHPFLQSGT 65 Query 62 GPFTKMGLDNPDTLYFGTRLQANRDYVVSGRRGTTTDLSFQLLGGEYTDYNVPASQAAFD 121 GPFTKMGLDNPDTLYFGTR+ AN DYVV+GRRGTTTDLSFQLLGGEYTD NVP SQAAFD Sbjct 66 GPFTKMGLDNPDTLYFGTRVHANHDYVVTGRRGTTTDLSFQLLGGEYTDDNVPVSQAAFD 125 Query 122 DRELDIAADGSFEWRLRPSAPGQLVIREVYGDWSQQRGTLAIARLDTVGTAPPPLTRELM 181 DREL IA DGSFEWR RP+ PGQLVIREVYGDW+ QRGTLAI+RLDT GTAPPPL+RE + Sbjct 126 DRELQIAPDGSFEWRFRPTDPGQLVIREVYGDWAAQRGTLAISRLDTAGTAPPPLSRETI 185 Query 182 EKRYATAGSQLVNRVKTWLQFPQWFYLNIPVNTMVAPRLTPGGLATQYSSAGHFELRPGQ 241 EKR+ATAG QLVNRVKTWLQFPQWFY NIPVNTMVAPRLTPGGLATQYSS GH+ELRP Q Sbjct 186 EKRFATAGKQLVNRVKTWLQFPQWFYFNIPVNTMVAPRLTPGGLATQYSSVGHYELRPDQ 245 Query 242 ALVITVPVSDAPYLGFQLGSMWYISLDYINHQTSLNASQAQADPDGKVRIVVAEQNPGVT 301 ALVI +PV+DAPYLGFQLGS+WYISLDYINHQTSLN +QAQADPDGKVRIVVA+QNPGVT Sbjct 246 ALVINIPVTDAPYLGFQLGSLWYISLDYINHQTSLNNTQAQADPDGKVRIVVADQNPGVT 305 Query 302 NWVETLGHRRGFLQFRWQRVSRELTEADGPTVELVDFDAIPAALPHYQHNKISEDDWRAR 361 NWVETLGHR+G LQFRWQRVSR+LT+ DGPTVELVD DA+PAALP+++HNKISEDDWRAR Sbjct 306 NWVETLGHRKGILQFRWQRVSRQLTDVDGPTVELVDIDAVPAALPYFEHNKISEDDWRAR 365 Query 362 IALRQRQIATRMLG 375 IALR +QI RMLG Sbjct 366 IALRHQQIQARMLG 379 >gi|333992312|ref|YP_004524926.1| hypothetical protein JDM601_3672 [Mycobacterium sp. JDM601] gi|333488280|gb|AEF37672.1| conserved hypothetical protein [Mycobacterium sp. JDM601] Length=376 Score = 653 bits (1685), Expect = 0.0, Method: Compositional matrix adjust. Identities = 312/376 (83%), Positives = 342/376 (91%), Gaps = 1/376 (0%) Query 1 VYSDPLREAIAEAEQLVAAAPHIETEADLLEGLQYLAGCIAGCMHLAFDYERDHPFLQSG 60 +YS+PL AIAEAE+LVAAAPHIETEADLLEGLQYLAG I C+H AF+ ERDHPFL SG Sbjct 1 MYSEPLTAAIAEAEKLVAAAPHIETEADLLEGLQYLAGGIEACVHAAFNSERDHPFLLSG 60 Query 61 TGPFTKMGLDNPDTLYFGTRLQANRDYVVSGRRGTTTDLSFQLLGGEYTDYNVPASQAAF 120 TGPFTKMGLDNPDTLYFGT ++ DYVV G RGTTTDLSFQLLGGEYTD NVPAS+AAF Sbjct 61 TGPFTKMGLDNPDTLYFGTVVRPGNDYVVRGVRGTTTDLSFQLLGGEYTDDNVPASEAAF 120 Query 121 DDRELDI-AADGSFEWRLRPSAPGQLVIREVYGDWSQQRGTLAIARLDTVGTAPPPLTRE 179 DDRELDI AADGSFEWR RP P QLVIREVY DWS +RGTL+I+R DT GTAPPPLTR Sbjct 121 DDRELDISAADGSFEWRFRPKTPAQLVIREVYNDWSARRGTLSISRTDTAGTAPPPLTRG 180 Query 180 LMEKRYATAGSQLVNRVKTWLQFPQWFYLNIPVNTMVAPRLTPGGLATQYSSAGHFELRP 239 L+EKRYA AG QL+NR+KTWL FPQWFYLN+PVNTMVAPRLTPGGLATQYSSAGH+ELRP Sbjct 181 LIEKRYAAAGKQLINRIKTWLAFPQWFYLNLPVNTMVAPRLTPGGLATQYSSAGHYELRP 240 Query 240 GQALVITVPVSDAPYLGFQLGSMWYISLDYINHQTSLNASQAQADPDGKVRIVVAEQNPG 299 +AL+IT+PVSDAPYLGFQLGS+WYISLDYINHQTSLNA+QAQADPDGK+RIVV++ NPG Sbjct 241 EEALLITLPVSDAPYLGFQLGSLWYISLDYINHQTSLNATQAQADPDGKIRIVVSDTNPG 300 Query 300 VTNWVETLGHRRGFLQFRWQRVSRELTEADGPTVELVDFDAIPAALPHYQHNKISEDDWR 359 +TNWVETLGHRRGFLQFRWQRVSR+LTEADGPTVELVD DAIPAALP Y+HNKI ++DWR Sbjct 301 ITNWVETLGHRRGFLQFRWQRVSRQLTEADGPTVELVDVDAIPAALPFYEHNKIEQEDWR 360 Query 360 ARIALRQRQIATRMLG 375 ARIALRQ+QIA RMLG Sbjct 361 ARIALRQQQIANRMLG 376 >gi|118472718|ref|YP_890158.1| hypothetical protein MSMEG_5932 [Mycobacterium smegmatis str. MC2 155] gi|118174005|gb|ABK74901.1| conserved hypothetical protein [Mycobacterium smegmatis str. MC2 155] Length=375 Score = 647 bits (1668), Expect = 0.0, Method: Compositional matrix adjust. Identities = 301/375 (81%), Positives = 340/375 (91%), Gaps = 0/375 (0%) Query 1 VYSDPLREAIAEAEQLVAAAPHIETEADLLEGLQYLAGCIAGCMHLAFDYERDHPFLQSG 60 +YS PL +AIAEAE+LVAAAP IE+EADL EGLQYLAGC++GC+HLAFDY+RDHPFLQSG Sbjct 1 MYSQPLVDAIAEAERLVAAAPFIESEADLTEGLQYLAGCVSGCLHLAFDYDRDHPFLQSG 60 Query 61 TGPFTKMGLDNPDTLYFGTRLQANRDYVVSGRRGTTTDLSFQLLGGEYTDYNVPASQAAF 120 TGPFTKMGLDNPDTLYFGTR+Q +YVV+G+RGTTTDLSFQ+LGGEYTD NVPASQAAF Sbjct 61 TGPFTKMGLDNPDTLYFGTRVQPGHEYVVTGKRGTTTDLSFQVLGGEYTDDNVPASQAAF 120 Query 121 DDRELDIAADGSFEWRLRPSAPGQLVIREVYGDWSQQRGTLAIARLDTVGTAPPPLTREL 180 DDRELDIA DG+FEWR+ P++P QLVIREVY DWS QRG LAIAR DT GTAPPPLT+EL Sbjct 121 DDRELDIAEDGTFEWRITPTSPSQLVIREVYNDWSAQRGHLAIARTDTAGTAPPPLTKEL 180 Query 181 MEKRYATAGSQLVNRVKTWLQFPQWFYLNIPVNTMVAPRLTPGGLATQYSSAGHFELRPG 240 +EKRYA AG QLV RVKTWLQFPQWFY N+PVNTMVAPRLTPGGLATQYSS GHF+LRP Sbjct 181 IEKRYAVAGKQLVQRVKTWLQFPQWFYNNLPVNTMVAPRLTPGGLATQYSSVGHFDLRPD 240 Query 241 QALVITVPVSDAPYLGFQLGSMWYISLDYINHQTSLNASQAQADPDGKVRIVVAEQNPGV 300 QA+VIT+PV+DAPYLGFQLGS+WYISLDYINHQTSLN +QAQ DPDGK+RIVV++ NPGV Sbjct 241 QAMVITLPVTDAPYLGFQLGSLWYISLDYINHQTSLNGTQAQEDPDGKIRIVVSDANPGV 300 Query 301 TNWVETLGHRRGFLQFRWQRVSRELTEADGPTVELVDFDAIPAALPHYQHNKISEDDWRA 360 TNW ETLGHR+G+LQFRWQR+SR LTEADGPTVE+VD D +P LP+++ NKISE DWRA Sbjct 301 TNWCETLGHRKGYLQFRWQRLSRALTEADGPTVEVVDIDQVPEKLPYHESNKISEADWRA 360 Query 361 RIALRQRQIATRMLG 375 RIALRQ+QI RM+G Sbjct 361 RIALRQQQIQNRMVG 375 >gi|167969145|ref|ZP_02551422.1| hypothetical protein MtubH3_14375 [Mycobacterium tuberculosis H37Ra] Length=309 Score = 634 bits (1636), Expect = 6e-180, Method: Compositional matrix adjust. Identities = 309/309 (100%), Positives = 309/309 (100%), Gaps = 0/309 (0%) Query 67 MGLDNPDTLYFGTRLQANRDYVVSGRRGTTTDLSFQLLGGEYTDYNVPASQAAFDDRELD 126 MGLDNPDTLYFGTRLQANRDYVVSGRRGTTTDLSFQLLGGEYTDYNVPASQAAFDDRELD Sbjct 1 MGLDNPDTLYFGTRLQANRDYVVSGRRGTTTDLSFQLLGGEYTDYNVPASQAAFDDRELD 60 Query 127 IAADGSFEWRLRPSAPGQLVIREVYGDWSQQRGTLAIARLDTVGTAPPPLTRELMEKRYA 186 IAADGSFEWRLRPSAPGQLVIREVYGDWSQQRGTLAIARLDTVGTAPPPLTRELMEKRYA Sbjct 61 IAADGSFEWRLRPSAPGQLVIREVYGDWSQQRGTLAIARLDTVGTAPPPLTRELMEKRYA 120 Query 187 TAGSQLVNRVKTWLQFPQWFYLNIPVNTMVAPRLTPGGLATQYSSAGHFELRPGQALVIT 246 TAGSQLVNRVKTWLQFPQWFYLNIPVNTMVAPRLTPGGLATQYSSAGHFELRPGQALVIT Sbjct 121 TAGSQLVNRVKTWLQFPQWFYLNIPVNTMVAPRLTPGGLATQYSSAGHFELRPGQALVIT 180 Query 247 VPVSDAPYLGFQLGSMWYISLDYINHQTSLNASQAQADPDGKVRIVVAEQNPGVTNWVET 306 VPVSDAPYLGFQLGSMWYISLDYINHQTSLNASQAQADPDGKVRIVVAEQNPGVTNWVET Sbjct 181 VPVSDAPYLGFQLGSMWYISLDYINHQTSLNASQAQADPDGKVRIVVAEQNPGVTNWVET 240 Query 307 LGHRRGFLQFRWQRVSRELTEADGPTVELVDFDAIPAALPHYQHNKISEDDWRARIALRQ 366 LGHRRGFLQFRWQRVSRELTEADGPTVELVDFDAIPAALPHYQHNKISEDDWRARIALRQ Sbjct 241 LGHRRGFLQFRWQRVSRELTEADGPTVELVDFDAIPAALPHYQHNKISEDDWRARIALRQ 300 Query 367 RQIATRMLG 375 RQIATRMLG Sbjct 301 RQIATRMLG 309 >gi|120406177|ref|YP_956006.1| hypothetical protein Mvan_5229 [Mycobacterium vanbaalenii PYR-1] gi|119958995|gb|ABM16000.1| conserved hypothetical protein [Mycobacterium vanbaalenii PYR-1] Length=387 Score = 630 bits (1624), Expect = 1e-178, Method: Compositional matrix adjust. Identities = 297/375 (80%), Positives = 330/375 (88%), Gaps = 0/375 (0%) Query 1 VYSDPLREAIAEAEQLVAAAPHIETEADLLEGLQYLAGCIAGCMHLAFDYERDHPFLQSG 60 V++ PL EAIAEAE+LVAAAP IE+EADLLEGLQYLAGC+A C H+AFDY+RDHPFL SG Sbjct 13 VFTQPLAEAIAEAEKLVAAAPFIESEADLLEGLQYLAGCVAACTHVAFDYDRDHPFLHSG 72 Query 61 TGPFTKMGLDNPDTLYFGTRLQANRDYVVSGRRGTTTDLSFQLLGGEYTDYNVPASQAAF 120 TGPFTKMGLDNPDT+YFGTR+Q +YVV+GRRGTTTD+SFQLLGGEYTD VP S+ AF Sbjct 73 TGPFTKMGLDNPDTMYFGTRVQPGHEYVVTGRRGTTTDVSFQLLGGEYTDEVVPDSETAF 132 Query 121 DDRELDIAADGSFEWRLRPSAPGQLVIREVYGDWSQQRGTLAIARLDTVGTAPPPLTREL 180 DDR+LDIAADG+FEWR P P QLVIREVY DWS QRGT AIAR DT GTAPPPLTREL Sbjct 133 DDRKLDIAADGTFEWRFTPKVPSQLVIREVYNDWSAQRGTFAIARTDTAGTAPPPLTREL 192 Query 181 MEKRYATAGSQLVNRVKTWLQFPQWFYLNIPVNTMVAPRLTPGGLATQYSSAGHFELRPG 240 +EKRYA AG QLV RVKTWLQFPQWFY + N+MVAPRLTPGGLATQYSSAG F+L Sbjct 193 IEKRYAVAGKQLVQRVKTWLQFPQWFYNDTQPNSMVAPRLTPGGLATQYSSAGQFDLAED 252 Query 241 QALVITVPVSDAPYLGFQLGSMWYISLDYINHQTSLNASQAQADPDGKVRIVVAEQNPGV 300 QAL+IT+PV+DAPYLGFQLGS+WYISLDYINHQTSLN +QAQADPDG +RIVVA++NPGV Sbjct 253 QALIITLPVTDAPYLGFQLGSLWYISLDYINHQTSLNGTQAQADPDGMIRIVVADRNPGV 312 Query 301 TNWVETLGHRRGFLQFRWQRVSRELTEADGPTVELVDFDAIPAALPHYQHNKISEDDWRA 360 TNWVETLGHR+GFLQFRWQRVSRELT ADGPTVELVD D + AALP+Y+ N ISE DWRA Sbjct 313 TNWVETLGHRKGFLQFRWQRVSRELTPADGPTVELVDIDKVAAALPYYESNTISEQDWRA 372 Query 361 RIALRQRQIATRMLG 375 RIALRQ+QI RM+G Sbjct 373 RIALRQKQIGERMVG 387 >gi|108801610|ref|YP_641807.1| hypothetical protein Mmcs_4647 [Mycobacterium sp. MCS] gi|119870764|ref|YP_940716.1| hypothetical protein Mkms_4735 [Mycobacterium sp. KMS] gi|108772029|gb|ABG10751.1| conserved hypothetical protein [Mycobacterium sp. MCS] gi|119696853|gb|ABL93926.1| conserved hypothetical protein [Mycobacterium sp. KMS] Length=375 Score = 628 bits (1619), Expect = 5e-178, Method: Compositional matrix adjust. Identities = 299/375 (80%), Positives = 328/375 (88%), Gaps = 0/375 (0%) Query 1 VYSDPLREAIAEAEQLVAAAPHIETEADLLEGLQYLAGCIAGCMHLAFDYERDHPFLQSG 60 +Y+ PL +AIAEAE+LVAAAP I++EADLLEGLQYLAGCIA C H+AFDY+RDHPFL SG Sbjct 1 MYTQPLADAIAEAEKLVAAAPFIDSEADLLEGLQYLAGCIAACTHVAFDYDRDHPFLHSG 60 Query 61 TGPFTKMGLDNPDTLYFGTRLQANRDYVVSGRRGTTTDLSFQLLGGEYTDYNVPASQAAF 120 TGPFTKMGLDNPDTLYFGTR+Q DYVV+GRRGTTTD+SFQLLGGEYTD VP S AF Sbjct 61 TGPFTKMGLDNPDTLYFGTRVQPGYDYVVTGRRGTTTDVSFQLLGGEYTDEVVPDSATAF 120 Query 121 DDRELDIAADGSFEWRLRPSAPGQLVIREVYGDWSQQRGTLAIARLDTVGTAPPPLTREL 180 DDR LDIAADGSFEWR P P QLVIREVY DWS QRGT AIAR DT GTAPPPLTREL Sbjct 121 DDRRLDIAADGSFEWRFTPEVPSQLVIREVYNDWSAQRGTFAIARTDTAGTAPPPLTREL 180 Query 181 MEKRYATAGSQLVNRVKTWLQFPQWFYLNIPVNTMVAPRLTPGGLATQYSSAGHFELRPG 240 +EKRYA AG QLV RVKTWLQFPQWFY + P NTMVAPRLTPGGLATQYSSAG F+L Sbjct 181 IEKRYAVAGKQLVQRVKTWLQFPQWFYNDSPPNTMVAPRLTPGGLATQYSSAGQFDLAED 240 Query 241 QALVITVPVSDAPYLGFQLGSMWYISLDYINHQTSLNASQAQADPDGKVRIVVAEQNPGV 300 QAL+IT+PV+DAPYLGFQLGS+WYISLDYINHQTSLN +QAQADPDGK+RIVV+EQNPGV Sbjct 241 QALIITLPVTDAPYLGFQLGSLWYISLDYINHQTSLNGTQAQADPDGKIRIVVSEQNPGV 300 Query 301 TNWVETLGHRRGFLQFRWQRVSRELTEADGPTVELVDFDAIPAALPHYQHNKISEDDWRA 360 TNW ETLGHR+GFLQFRWQRVSRELT ADGP+VE+VD + AALP+Y NKIS +DWRA Sbjct 301 TNWCETLGHRKGFLQFRWQRVSRELTPADGPSVEVVDIGDVSAALPYYASNKISGEDWRA 360 Query 361 RIALRQRQIATRMLG 375 RIALRQ+QI RM+G Sbjct 361 RIALRQKQIGERMVG 375 >gi|126437594|ref|YP_001073285.1| hypothetical protein Mjls_5030 [Mycobacterium sp. JLS] gi|126237394|gb|ABO00795.1| conserved hypothetical protein [Mycobacterium sp. JLS] Length=375 Score = 625 bits (1612), Expect = 4e-177, Method: Compositional matrix adjust. Identities = 298/375 (80%), Positives = 327/375 (88%), Gaps = 0/375 (0%) Query 1 VYSDPLREAIAEAEQLVAAAPHIETEADLLEGLQYLAGCIAGCMHLAFDYERDHPFLQSG 60 +Y+ PL +AIAEAE+LVAAAP I++ ADLLEGLQYLAGCIA C H+AFDY+RDHPFL SG Sbjct 1 MYTQPLADAIAEAEKLVAAAPFIDSGADLLEGLQYLAGCIAACTHVAFDYDRDHPFLHSG 60 Query 61 TGPFTKMGLDNPDTLYFGTRLQANRDYVVSGRRGTTTDLSFQLLGGEYTDYNVPASQAAF 120 TGPFTKMGLDNPDTLYFGTR+Q DYVV+GRRGTTTD+SFQLLGGEYTD VP S AF Sbjct 61 TGPFTKMGLDNPDTLYFGTRVQPGYDYVVTGRRGTTTDVSFQLLGGEYTDEVVPDSATAF 120 Query 121 DDRELDIAADGSFEWRLRPSAPGQLVIREVYGDWSQQRGTLAIARLDTVGTAPPPLTREL 180 DDR LDIAADGSFEWR P P QLVIREVY DWS QRGT AIAR DT GTAPPPLTREL Sbjct 121 DDRRLDIAADGSFEWRFTPEVPSQLVIREVYNDWSAQRGTFAIARTDTAGTAPPPLTREL 180 Query 181 MEKRYATAGSQLVNRVKTWLQFPQWFYLNIPVNTMVAPRLTPGGLATQYSSAGHFELRPG 240 +EKRYA AG QLV RVKTWLQFPQWFY + P NTMVAPRLTPGGLATQYSSAG F+L Sbjct 181 IEKRYAVAGKQLVQRVKTWLQFPQWFYNDSPPNTMVAPRLTPGGLATQYSSAGQFDLAED 240 Query 241 QALVITVPVSDAPYLGFQLGSMWYISLDYINHQTSLNASQAQADPDGKVRIVVAEQNPGV 300 QAL+IT+PV+DAPYLGFQLGS+WYISLDYINHQTSLN +QAQADPDGK+RIVV+EQNPGV Sbjct 241 QALIITLPVTDAPYLGFQLGSLWYISLDYINHQTSLNGTQAQADPDGKIRIVVSEQNPGV 300 Query 301 TNWVETLGHRRGFLQFRWQRVSRELTEADGPTVELVDFDAIPAALPHYQHNKISEDDWRA 360 TNW ETLGHR+GFLQFRWQRVSRELT ADGP+VE+VD + AALP+Y NKIS +DWRA Sbjct 301 TNWCETLGHRKGFLQFRWQRVSRELTPADGPSVEVVDIGDVSAALPYYASNKISGEDWRA 360 Query 361 RIALRQRQIATRMLG 375 RIALRQ+QI RM+G Sbjct 361 RIALRQKQIGERMVG 375 >gi|145222121|ref|YP_001132799.1| hypothetical protein Mflv_1529 [Mycobacterium gilvum PYR-GCK] gi|315442560|ref|YP_004075439.1| hypothetical protein Mspyr1_09130 [Mycobacterium sp. Spyr1] gi|145214607|gb|ABP44011.1| conserved hypothetical protein [Mycobacterium gilvum PYR-GCK] gi|315260863|gb|ADT97604.1| hypothetical protein Mspyr1_09130 [Mycobacterium sp. Spyr1] Length=375 Score = 620 bits (1598), Expect = 1e-175, Method: Compositional matrix adjust. Identities = 291/375 (78%), Positives = 329/375 (88%), Gaps = 0/375 (0%) Query 1 VYSDPLREAIAEAEQLVAAAPHIETEADLLEGLQYLAGCIAGCMHLAFDYERDHPFLQSG 60 +++ PL +AIAEAE+LV+AAP IE+EADLLEGLQYLAGCIA C H+AFDY+RDHPFL SG Sbjct 1 MFAQPLADAIAEAEELVSAAPFIESEADLLEGLQYLAGCIAACTHVAFDYDRDHPFLHSG 60 Query 61 TGPFTKMGLDNPDTLYFGTRLQANRDYVVSGRRGTTTDLSFQLLGGEYTDYNVPASQAAF 120 TGPFTKMGLDNPDT+YFGTR+Q +YVV+GRRGTTTD+SFQLLGGEYTD VP S AF Sbjct 61 TGPFTKMGLDNPDTMYFGTRVQPGHEYVVTGRRGTTTDVSFQLLGGEYTDEVVPDSDTAF 120 Query 121 DDRELDIAADGSFEWRLRPSAPGQLVIREVYGDWSQQRGTLAIARLDTVGTAPPPLTREL 180 DDR+LDIAADG+FEWR P+ P QLVIREVY DWS QRGT AIAR DT GTAPPPLTREL Sbjct 121 DDRKLDIAADGTFEWRFTPAVPSQLVIREVYNDWSAQRGTFAIARTDTAGTAPPPLTREL 180 Query 181 MEKRYATAGSQLVNRVKTWLQFPQWFYLNIPVNTMVAPRLTPGGLATQYSSAGHFELRPG 240 +EKRY AG QLV RVKTWLQFPQWFY + P NTMVAPRLTPGGLATQYSSAG F+L Sbjct 181 IEKRYTVAGKQLVQRVKTWLQFPQWFYNDSPPNTMVAPRLTPGGLATQYSSAGQFDLAED 240 Query 241 QALVITVPVSDAPYLGFQLGSMWYISLDYINHQTSLNASQAQADPDGKVRIVVAEQNPGV 300 QAL+IT+PV+DAPYLGFQLGS+WYISLDYINHQTSLN +QAQADPD K+RIVV+++NPGV Sbjct 241 QALIITLPVTDAPYLGFQLGSLWYISLDYINHQTSLNGTQAQADPDDKIRIVVSDRNPGV 300 Query 301 TNWVETLGHRRGFLQFRWQRVSRELTEADGPTVELVDFDAIPAALPHYQHNKISEDDWRA 360 TNWVETLGHR+GFLQFRWQRVSRE+T ADGPTVELV D + +ALP++ N ISE+DWRA Sbjct 301 TNWVETLGHRKGFLQFRWQRVSREMTAADGPTVELVHVDDVASALPYHDSNTISEEDWRA 360 Query 361 RIALRQRQIATRMLG 375 RIALRQ+QI RM+G Sbjct 361 RIALRQKQIGERMVG 375 >gi|120405779|ref|YP_955608.1| hypothetical protein Mvan_4829 [Mycobacterium vanbaalenii PYR-1] gi|119958597|gb|ABM15602.1| conserved hypothetical protein [Mycobacterium vanbaalenii PYR-1] Length=397 Score = 584 bits (1506), Expect = 6e-165, Method: Compositional matrix adjust. Identities = 272/375 (73%), Positives = 313/375 (84%), Gaps = 0/375 (0%) Query 1 VYSDPLREAIAEAEQLVAAAPHIETEADLLEGLQYLAGCIAGCMHLAFDYERDHPFLQSG 60 +Y + IA AE+LV APH+E+EADLLEGLQYLAGCIA C LAFDY+RDHPFL SG Sbjct 23 MYVQEFLDRIAAAERLVREAPHVESEADLLEGLQYLAGCIAACTRLAFDYDRDHPFLHSG 82 Query 61 TGPFTKMGLDNPDTLYFGTRLQANRDYVVSGRRGTTTDLSFQLLGGEYTDYNVPASQAAF 120 TGPFTKM LDNPDTLYFGT LQ +YV++GRRGTTTDLSFQLLGGEYT+ NVP +Q AF Sbjct 83 TGPFTKMALDNPDTLYFGTWLQGGHEYVLTGRRGTTTDLSFQLLGGEYTEDNVPDNQFAF 142 Query 121 DDRELDIAADGSFEWRLRPSAPGQLVIREVYGDWSQQRGTLAIARLDTVGTAPPPLTREL 180 DDRELD+A DGSFEWR P++ QLV+REVY DWS QRGT+AIAR D+ GTAP LT EL Sbjct 143 DDRELDLAVDGSFEWRFTPNSDAQLVVREVYNDWSAQRGTIAIARTDSTGTAPRTLTPEL 202 Query 181 MEKRYATAGSQLVNRVKTWLQFPQWFYLNIPVNTMVAPRLTPGGLATQYSSAGHFELRPG 240 + RYA AG L R++TWL FPQWFYLN+PVNT+ APR+TPGGLATQYSS GHF+L PG Sbjct 203 IAIRYAAAGKHLTRRIRTWLSFPQWFYLNVPVNTLTAPRITPGGLATQYSSVGHFDLGPG 262 Query 241 QALVITVPVSDAPYLGFQLGSMWYISLDYINHQTSLNASQAQADPDGKVRIVVAEQNPGV 300 +A+VIT+P SDAPYLGFQLGSMWYISLDYINHQTSLN +QAQ DPDG +RIVVA ++PG+ Sbjct 263 RAMVITLPASDAPYLGFQLGSMWYISLDYINHQTSLNGTQAQVDPDGMIRIVVAHESPGI 322 Query 301 TNWVETLGHRRGFLQFRWQRVSRELTEADGPTVELVDFDAIPAALPHYQHNKISEDDWRA 360 NWVETLGHRRG+LQFRWQR SR+LT A+GP E+VDFDAIP+ LP++ HN IS DD+R Sbjct 323 ANWVETLGHRRGYLQFRWQRTSRKLTAAEGPIAEVVDFDAIPSRLPYFGHNTISNDDFRT 382 Query 361 RIALRQRQIATRMLG 375 RIALRQ QIA RM+ Sbjct 383 RIALRQNQIANRMVA 397 >gi|169631257|ref|YP_001704906.1| hypothetical protein MAB_4179c [Mycobacterium abscessus ATCC 19977] gi|169243224|emb|CAM64252.1| Conserved hypothetical protein [Mycobacterium abscessus] Length=390 Score = 560 bits (1444), Expect = 1e-157, Method: Compositional matrix adjust. Identities = 269/390 (69%), Positives = 310/390 (80%), Gaps = 15/390 (3%) Query 1 VYSDPLREAIAEAEQLVAAAPHIETEADLLEGLQYLAGCIAGCMHLAFDYERDHPFLQSG 60 +YS+ AI EAE+L+ AAPHIETEADLLEGLQYLA IA C H+AF +RDHPFL SG Sbjct 1 MYSEAFTAAIVEAEELIVAAPHIETEADLLEGLQYLAQGIAACTHMAFHTDRDHPFLLSG 60 Query 61 TGPFTKMGLDNPDTLYFGTRLQANRDYVVSGRRGTTTDLSFQLLGG-EYTDYNVPASQAA 119 TGPFTKMGLDNPDTLYFG R+ +YVV+G+RGTTTDLSFQ+LGG +YTD NVP S A Sbjct 61 TGPFTKMGLDNPDTLYFGARVSGEYEYVVTGKRGTTTDLSFQVLGGGDYTDKNVPGSAIA 120 Query 120 FDDRELDIAADGSFEWRLRPS--------------APGQLVIREVYGDWSQQRGTLAIAR 165 FDDRE+ I +DGSFE R P+ P QLV+REVY DW +QRG+LAIAR Sbjct 121 FDDREIHIDSDGSFEVRFGPAPADDSRPNYFTLGPGPAQLVMREVYSDWREQRGSLAIAR 180 Query 166 LDTVGTAPPPLTRELMEKRYATAGSQLVNRVKTWLQFPQWFYLNIPVNTMVAPRLTPGGL 225 +DT GTAP PLT+E +EKRYA+AG QLVNRVKTWLQFP+WFY N+PVNTM PRLTPGGL Sbjct 181 VDTAGTAPAPLTKEQIEKRYASAGKQLVNRVKTWLQFPKWFYDNLPVNTMTEPRLTPGGL 240 Query 226 ATQYSSAGHFELRPGQALVITVPVSDAPYLGFQLGSMWYISLDYINHQTSLNASQAQADP 285 ATQ+SS GH++L QA++ITVP SDAPY GFQLGS+WYISLDYINHQTSLN+SQAQ DP Sbjct 241 ATQFSSVGHYDLADDQAMIITVPKSDAPYQGFQLGSLWYISLDYINHQTSLNSSQAQIDP 300 Query 286 DGKVRIVVAEQNPGVTNWVETLGHRRGFLQFRWQRVSRELTEADGPTVELVDFDAIPAAL 345 DG +R+VV+ NPGVTNW+ETLGHRR +LQFRWQR R+LT ADGPTVE+V IPA L Sbjct 301 DGNIRMVVSNTNPGVTNWIETLGHRRAYLQFRWQRADRQLTPADGPTVEVVAVGDIPAKL 360 Query 346 PHYQHNKISEDDWRARIALRQRQIATRMLG 375 PHY N+ISE+ WR+RIA RQ I RMLG Sbjct 361 PHYSQNQISEEGWRSRIAERQTAIGARMLG 390 >gi|325673548|ref|ZP_08153239.1| hypothetical protein HMPREF0724_11021 [Rhodococcus equi ATCC 33707] gi|325555569|gb|EGD25240.1| hypothetical protein HMPREF0724_11021 [Rhodococcus equi ATCC 33707] Length=388 Score = 515 bits (1327), Expect = 4e-144, Method: Compositional matrix adjust. Identities = 250/388 (65%), Positives = 297/388 (77%), Gaps = 13/388 (3%) Query 1 VYSDPLREAIAEAEQLVAAAPHIETEADLLEGLQYLAGCIAGCMHLAFDYERDHPFLQSG 60 + +DPL EAIAEAE+LV +APHI +E DLLEG+QYLAG I +H A+ E+ HP G Sbjct 1 MLTDPLAEAIAEAEKLVESAPHIRSEQDLLEGMQYLAGGILATVHAAWATEKTHPSFIQG 60 Query 61 TGPFTKMGLDNPDTLYFGTRLQANRDYVVSGRRGTTTDLSFQLLGGEYTDYNVPASQAAF 120 TGPFTKMGLDNPDTLYFG R+ + +Y+V+G RGTT DLSFQ+L G YT+ NVP S+ AF Sbjct 61 TGPFTKMGLDNPDTLYFGARVNDDAEYIVTGTRGTTADLSFQVLSGNYTNANVPGSEIAF 120 Query 121 DDRELDIAADGSFEWRLRPS-----------APG--QLVIREVYGDWSQQRGTLAIARLD 167 DDREL I DG+F P APG QLV+REVY DWSQQRGT+ I R D Sbjct 121 DDRELHIEDDGTFVATFGPGPADGRRNHFTLAPGSSQLVVREVYSDWSQQRGTIRIERAD 180 Query 168 TVGTAPPPLTRELMEKRYATAGSQLVNRVKTWLQFPQWFYLNIPVNTMVAPRLTPGGLAT 227 +G PPLTRE EKR+A AG LV+RVKTWLQFPQWFY N+PVNTM APRLTPGGLAT Sbjct 181 RIGVPVPPLTREETEKRFARAGKALVSRVKTWLQFPQWFYDNLPVNTMTAPRLTPGGLAT 240 Query 228 QYSSAGHFELRPGQALVITVPVSDAPYLGFQLGSMWYISLDYINHQTSLNASQAQADPDG 287 QYSS GH++L +A++ITVP SDAPY GFQLGS+WYISLDYI+HQTSLN +QAQ DPDG Sbjct 241 QYSSVGHYDLADDEAMIITVPKSDAPYQGFQLGSLWYISLDYISHQTSLNNAQAQVDPDG 300 Query 288 KVRIVVAEQNPGVTNWVETLGHRRGFLQFRWQRVSRELTEADGPTVELVDFDAIPAALPH 347 +R+V++E+NPGVTNW+E LGH RG+LQFRWQR SRE T DGPTVE+V FD + A LP Sbjct 301 MIRMVLSERNPGVTNWLEALGHPRGYLQFRWQRTSREFTAEDGPTVEVVKFDEVSAKLPF 360 Query 348 YQHNKISEDDWRARIALRQRQIATRMLG 375 ++HNKI+ +D+ ARIA RQ +A RMLG Sbjct 361 HEHNKITPEDFAARIAERQAAVADRMLG 388 >gi|312139147|ref|YP_004006483.1| hypothetical protein REQ_17300 [Rhodococcus equi 103S] gi|311888486|emb|CBH47798.1| conserved hypothetical protein [Rhodococcus equi 103S] Length=388 Score = 514 bits (1323), Expect = 1e-143, Method: Compositional matrix adjust. Identities = 249/388 (65%), Positives = 297/388 (77%), Gaps = 13/388 (3%) Query 1 VYSDPLREAIAEAEQLVAAAPHIETEADLLEGLQYLAGCIAGCMHLAFDYERDHPFLQSG 60 + +DPL EAIAEAE+LV +APHI +E DLLEG+QYLAG I +H A+ E+ HP G Sbjct 1 MLTDPLAEAIAEAEKLVESAPHIRSEQDLLEGMQYLAGGILATVHAAWATEKTHPSFIQG 60 Query 61 TGPFTKMGLDNPDTLYFGTRLQANRDYVVSGRRGTTTDLSFQLLGGEYTDYNVPASQAAF 120 TGPFTKMGLDNPDTLYFG R+ + +Y+V+G RGTT DLSFQ+L G YT+ NVP S+ AF Sbjct 61 TGPFTKMGLDNPDTLYFGARINDDAEYIVTGTRGTTADLSFQVLSGNYTNANVPGSEIAF 120 Query 121 DDRELDIAADGSFEWRLRPS-----------APG--QLVIREVYGDWSQQRGTLAIARLD 167 DDREL I DG+F P APG QLV+REVY DWSQQRGT+ I R D Sbjct 121 DDRELHIEDDGTFVATFGPGPADGRRNHFTLAPGSSQLVVREVYSDWSQQRGTIRIERAD 180 Query 168 TVGTAPPPLTRELMEKRYATAGSQLVNRVKTWLQFPQWFYLNIPVNTMVAPRLTPGGLAT 227 +G PPLTRE EKR+A AG LV+RV+TWLQFPQWFY N+PVNTM APRLTPGGLAT Sbjct 181 RIGVPVPPLTREETEKRFARAGKALVSRVQTWLQFPQWFYDNLPVNTMTAPRLTPGGLAT 240 Query 228 QYSSAGHFELRPGQALVITVPVSDAPYLGFQLGSMWYISLDYINHQTSLNASQAQADPDG 287 QYSS GH++L +A++ITVP SDAPY GFQLGS+WYISLDYI+HQTSLN +QAQ DPDG Sbjct 241 QYSSVGHYDLADDEAMIITVPKSDAPYQGFQLGSLWYISLDYISHQTSLNNAQAQVDPDG 300 Query 288 KVRIVVAEQNPGVTNWVETLGHRRGFLQFRWQRVSRELTEADGPTVELVDFDAIPAALPH 347 +R+V++E+NPGVTNW+E LGH RG+LQFRWQR SRE T DGPTVE+V FD + A LP Sbjct 301 MIRMVLSERNPGVTNWLEALGHPRGYLQFRWQRTSREFTAEDGPTVEVVKFDEVSAKLPF 360 Query 348 YQHNKISEDDWRARIALRQRQIATRMLG 375 ++HNKI+ +D+ ARIA RQ +A RMLG Sbjct 361 HEHNKITPEDFAARIAERQAAVADRMLG 388 >gi|296141273|ref|YP_003648516.1| hypothetical protein Tpau_3599 [Tsukamurella paurometabola DSM 20162] gi|296029407|gb|ADG80177.1| conserved hypothetical protein [Tsukamurella paurometabola DSM 20162] Length=385 Score = 508 bits (1308), Expect = 7e-142, Method: Compositional matrix adjust. Identities = 262/387 (68%), Positives = 299/387 (78%), Gaps = 14/387 (3%) Query 1 VYSDPLREAIAEAEQLVAAAPHIETEADLLEGLQYLAGCIAGCMHLAFDYERDHPFLQSG 60 +YS+PL AIAEAE LVAAA HIE+EADLLEGLQYLA +A C+H AF +++DHPFL SG Sbjct 1 MYSEPLTSAIAEAEALVAAAAHIESEADLLEGLQYLAQGVAACIHGAFHFDKDHPFLLSG 60 Query 61 TGPFTKMGLDNPDTLYFGTRLQANRDYVVSGRRGTTTDLSFQLLGG-EYTDYNVPASQAA 119 TGPFTKMGLDNPDTLYFG R+ + +Y+V+GRRGTT D+SFQ+LGG EYTD NVPAS A Sbjct 61 TGPFTKMGLDNPDTLYFGARVDGSHEYLVTGRRGTTADISFQVLGGGEYTDENVPASTVA 120 Query 120 FDDRELDIAADGSFEWRLRPSAPG-----------QLVIREVYGDWSQQRGTLAIARLDT 168 FDDREL I ADG F R P G QLVIREV+ DWS QR T AI R DT Sbjct 121 FDDRELTIGADGRFAVRFGPGRAGPDYYHLPPGKAQLVIREVFDDWSAQRSTFAITRTDT 180 Query 169 VGTAPPPLTRELMEKRYATAGSQLVNRVKTWLQFPQWFYLNIPVNTMVAPRLTPGGLATQ 228 GTAPPPLT EL+ KRYA AG+QLVNRVKTWLQFP+WFY +PVNT+ APRLTPGGLATQ Sbjct 181 TGTAPPPLTDELIRKRYAAAGTQLVNRVKTWLQFPRWFYDPLPVNTLSAPRLTPGGLATQ 240 Query 229 YSSAGHFELRPGQALVITVPVSDAPYLGFQLGSMWYISLDYINHQTSLNASQAQADPDGK 288 YSS GH+ L QAL+ITVP DAPY+GFQLGS+WYISLDYINHQTSLN SQAQ DPDG Sbjct 241 YSSVGHYHLADDQALIITVPRGDAPYVGFQLGSLWYISLDYINHQTSLNGSQAQVDPDGN 300 Query 289 VRIVVAEQNPGVTNWVETLGHRRGFLQFRWQRVSRELTEADGPTVELVDFDAIPAALPHY 348 +RIVV+ +NPG+TNW+ET+GHRRG+LQFRWQR S +TE GPT +V D + LP + Sbjct 301 IRIVVSGKNPGITNWIETVGHRRGYLQFRWQRTSGPVTE--GPTAHVVPLDDVARHLPFH 358 Query 349 QHNKISEDDWRARIALRQRQIATRMLG 375 N I E WRARIA RQR I RM+G Sbjct 359 AQNTIDEHRWRARIAERQRLIGERMVG 385 >gi|111018521|ref|YP_701493.1| hypothetical protein RHA1_ro01521 [Rhodococcus jostii RHA1] gi|110818051|gb|ABG93335.1| conserved hypothetical protein [Rhodococcus jostii RHA1] Length=388 Score = 505 bits (1301), Expect = 4e-141, Method: Compositional matrix adjust. Identities = 255/386 (67%), Positives = 296/386 (77%), Gaps = 13/386 (3%) Query 3 SDPLREAIAEAEQLVAAAPHIETEADLLEGLQYLAGCIAGCMHLAFDYERDHPFLQSGTG 62 +DP +A+AEAE+L+ APHI TE DLLEG QYLAG I H A+ E+ HP SGTG Sbjct 3 TDPFADAMAEAEKLIEGAPHIRTEQDLLEGYQYLAGGILATTHAAWATEQSHPTFISGTG 62 Query 63 PFTKMGLDNPDTLYFGTRLQANRDYVVSGRRGTTTDLSFQLLGGEYTDYNVPASQAAFDD 122 P+ KMGLDNPDTLYFG R+ + +YVV+GRRGTT DLSFQ+L G YT +VP S AFDD Sbjct 63 PYMKMGLDNPDTLYFGARINDDVEYVVTGRRGTTADLSFQVLSGNYTAAHVPGSVTAFDD 122 Query 123 RELDIAADGSFEWRLRPS-----------APG--QLVIREVYGDWSQQRGTLAIARLDTV 169 RE+DIA DGSFE R P APG QLV+REVY DWSQQRGT+ IAR DT Sbjct 123 REIDIAPDGSFEVRFGPDESSGRRNYFTLAPGSSQLVVREVYSDWSQQRGTIRIARADTT 182 Query 170 GTAPPPLTRELMEKRYATAGSQLVNRVKTWLQFPQWFYLNIPVNTMVAPRLTPGGLATQY 229 GT P PLTRE +EKRYA AG LV+RVKTWLQFP+WFYLN+PVNTM PRLTPGGLATQY Sbjct 183 GTPPGPLTREAVEKRYARAGRALVSRVKTWLQFPEWFYLNLPVNTMTEPRLTPGGLATQY 242 Query 230 SSAGHFELRPGQALVITVPVSDAPYLGFQLGSMWYISLDYINHQTSLNASQAQADPDGKV 289 SS GH+EL +A+VITVP +D PY GFQLGSMWYISLDY+NHQTSLN +Q+Q DPD + Sbjct 243 SSVGHYELADDEAIVITVPKADVPYQGFQLGSMWYISLDYVNHQTSLNVAQSQVDPDDHI 302 Query 290 RIVVAEQNPGVTNWVETLGHRRGFLQFRWQRVSRELTEADGPTVELVDFDAIPAALPHYQ 349 R+VV+E+NPGV NW+ T+GH RG+LQFRWQRVSRELT ADGP +E+V FD I ALP+Y Sbjct 303 RLVVSERNPGVANWIATVGHLRGYLQFRWQRVSRELTPADGPRIEVVKFDEIHRALPYYD 362 Query 350 HNKISEDDWRARIALRQRQIATRMLG 375 NKIS +D+ ARIA RQ +A RMLG Sbjct 363 SNKISPEDFAARIAARQAAVADRMLG 388 >gi|226360640|ref|YP_002778418.1| hypothetical protein ROP_12260 [Rhodococcus opacus B4] gi|226239125|dbj|BAH49473.1| hypothetical protein [Rhodococcus opacus B4] Length=388 Score = 502 bits (1292), Expect = 4e-140, Method: Compositional matrix adjust. Identities = 252/386 (66%), Positives = 296/386 (77%), Gaps = 13/386 (3%) Query 3 SDPLREAIAEAEQLVAAAPHIETEADLLEGLQYLAGCIAGCMHLAFDYERDHPFLQSGTG 62 +DP +A+AEAE+L+ +APHI TE DLLEG QYLAG I H A+ ER HP SGTG Sbjct 3 TDPFADAMAEAEKLIESAPHIRTEQDLLEGYQYLAGGILATTHAAWATERSHPTFISGTG 62 Query 63 PFTKMGLDNPDTLYFGTRLQANRDYVVSGRRGTTTDLSFQLLGGEYTDYNVPASQAAFDD 122 P+ KMGLDNPDTLYFG R+ + +YVV+GRRGTT DLSFQ+L G YT +VP S AFDD Sbjct 63 PYMKMGLDNPDTLYFGARIDDDVEYVVTGRRGTTADLSFQVLNGNYTAAHVPGSVTAFDD 122 Query 123 RELDIAADGSFEWRLRPS-----------AP--GQLVIREVYGDWSQQRGTLAIARLDTV 169 RE+DIA DGSFE R P AP QLV+REVY DW Q+RGT+ IAR DTV Sbjct 123 REIDIAPDGSFEVRFGPGDSAGRRNYFTLAPDSSQLVVREVYSDWHQRRGTIRIARADTV 182 Query 170 GTAPPPLTRELMEKRYATAGSQLVNRVKTWLQFPQWFYLNIPVNTMVAPRLTPGGLATQY 229 GTAP PLTRE +EKRYA AG LV+RVKTWLQFP+WFYLN+PVNTM PRLTPGGLATQY Sbjct 183 GTAPGPLTREAVEKRYARAGKALVSRVKTWLQFPEWFYLNLPVNTMTEPRLTPGGLATQY 242 Query 230 SSAGHFELRPGQALVITVPVSDAPYLGFQLGSMWYISLDYINHQTSLNASQAQADPDGKV 289 SS GH+EL +A+VITVP +D PY GFQLGSMWYISLDY+NHQTSLN +Q+Q DPD ++ Sbjct 243 SSVGHYELAEDEAIVITVPKADVPYQGFQLGSMWYISLDYVNHQTSLNVAQSQVDPDDRI 302 Query 290 RIVVAEQNPGVTNWVETLGHRRGFLQFRWQRVSRELTEADGPTVELVDFDAIPAALPHYQ 349 R+VV+E+NPGV NW+ T+GH RG+LQFRWQRVSRELT DGP +E+V FD + LP+Y Sbjct 303 RLVVSERNPGVANWIATVGHLRGYLQFRWQRVSRELTPDDGPRIEVVKFDDVHRQLPYYD 362 Query 350 HNKISEDDWRARIALRQRQIATRMLG 375 NKIS +D+ ARIA RQ +A RMLG Sbjct 363 SNKISPEDFAARIAARQAAVADRMLG 388 >gi|229489992|ref|ZP_04383845.1| conserved hypothetical protein [Rhodococcus erythropolis SK121] gi|229323093|gb|EEN88861.1| conserved hypothetical protein [Rhodococcus erythropolis SK121] Length=388 Score = 499 bits (1284), Expect = 4e-139, Method: Compositional matrix adjust. Identities = 251/386 (66%), Positives = 288/386 (75%), Gaps = 13/386 (3%) Query 3 SDPLREAIAEAEQLVAAAPHIETEADLLEGLQYLAGCIAGCMHLAFDYERDHPFLQSGTG 62 +DP EAIAEAE+L+ APHI +E DLLEG QYLAG I H A+ E+ HP GTG Sbjct 3 TDPFAEAIAEAEKLIETAPHIRSEQDLLEGYQYLAGGIIATTHAAWAGEKTHPSFIQGTG 62 Query 63 PFTKMGLDNPDTLYFGTRLQANRDYVVSGRRGTTTDLSFQLLGGEYTDYNVPASQAAFDD 122 PFTKMGLDNPDTLYFG R+ +++Y V+G+RGTT DLSFQ+L G YT+ NVP S+ AFDD Sbjct 63 PFTKMGLDNPDTLYFGARINDDKEYKVTGKRGTTADLSFQVLSGNYTNSNVPGSEIAFDD 122 Query 123 RELDIAADGSFEWRLRPS-----------APG--QLVIREVYGDWSQQRGTLAIARLDTV 169 REL+I DG+F P APG QLV+REVY DWSQQRG + I R D++ Sbjct 123 RELEIDDDGNFVAWFGPGPADGRANYYTLAPGSSQLVVREVYSDWSQQRGVIRIERTDSI 182 Query 170 GTAPPPLTRELMEKRYATAGSQLVNRVKTWLQFPQWFYLNIPVNTMVAPRLTPGGLATQY 229 G APPPLT E EKRYA AG LV RVKTWLQFP+WFYL + VNTM PRLTPGGLATQY Sbjct 183 GIAPPPLTAEETEKRYARAGKALVTRVKTWLQFPEWFYLKLAVNTMTEPRLTPGGLATQY 242 Query 230 SSAGHFELRPGQALVITVPVSDAPYLGFQLGSMWYISLDYINHQTSLNASQAQADPDGKV 289 SS GH+EL QA++ITVP SDAPYLGFQLGS+WYISLDY+NHQTSLN QAQ DPDG V Sbjct 243 SSVGHYELTDEQAMIITVPASDAPYLGFQLGSLWYISLDYVNHQTSLNNGQAQVDPDGMV 302 Query 290 RIVVAEQNPGVTNWVETLGHRRGFLQFRWQRVSRELTEADGPTVELVDFDAIPAALPHYQ 349 R+VV+E+NPGVTNW+ET+GH RG LQFRWQRVSRELT DGPTVE+V I LPH+ Sbjct 303 RMVVSEKNPGVTNWIETVGHPRGILQFRWQRVSRELTPQDGPTVEIVAVADIAKHLPHFD 362 Query 350 HNKISEDDWRARIALRQRQIATRMLG 375 N I+ +DW ARIA RQ I RMLG Sbjct 363 TNTITAEDWAARIAQRQAAIDNRMLG 388 >gi|226307426|ref|YP_002767386.1| hypothetical protein RER_39390 [Rhodococcus erythropolis PR4] gi|226186543|dbj|BAH34647.1| conserved hypothetical protein [Rhodococcus erythropolis PR4] Length=388 Score = 497 bits (1280), Expect = 1e-138, Method: Compositional matrix adjust. Identities = 250/386 (65%), Positives = 287/386 (75%), Gaps = 13/386 (3%) Query 3 SDPLREAIAEAEQLVAAAPHIETEADLLEGLQYLAGCIAGCMHLAFDYERDHPFLQSGTG 62 +DP EAIAEAE+L+ APHI +E DLLEG QYLAG I H A+ E+ HP GTG Sbjct 3 TDPFAEAIAEAEKLIETAPHIRSEQDLLEGYQYLAGGIIATTHAAWASEKTHPSFIQGTG 62 Query 63 PFTKMGLDNPDTLYFGTRLQANRDYVVSGRRGTTTDLSFQLLGGEYTDYNVPASQAAFDD 122 PFTKMGLDNPDTLYFG R+ +++Y V+G+RGTT DLSFQ+L G YT+ NVP S+ AFDD Sbjct 63 PFTKMGLDNPDTLYFGARINDDKEYKVTGKRGTTADLSFQVLSGNYTNSNVPGSEIAFDD 122 Query 123 RELDIAADGSFEWRLRPS-----------APG--QLVIREVYGDWSQQRGTLAIARLDTV 169 REL+I DG+F P APG QLV+REVY DWSQQRG + I R D++ Sbjct 123 RELEIDDDGNFVAWFGPGPADGRANYYTLAPGSSQLVVREVYSDWSQQRGVIRIERTDSI 182 Query 170 GTAPPPLTRELMEKRYATAGSQLVNRVKTWLQFPQWFYLNIPVNTMVAPRLTPGGLATQY 229 G APPPLT E EKRYA AG LV RVKTWLQFP+WFYL + VNTM PRLTPGGLATQY Sbjct 183 GIAPPPLTAEETEKRYARAGKALVTRVKTWLQFPEWFYLKLTVNTMTEPRLTPGGLATQY 242 Query 230 SSAGHFELRPGQALVITVPVSDAPYLGFQLGSMWYISLDYINHQTSLNASQAQADPDGKV 289 SS GH+EL QA++ITVP SDAPYLGFQLGS+WYISLDY+NHQTSLN QAQ DPDG V Sbjct 243 SSVGHYELTDEQAMIITVPASDAPYLGFQLGSLWYISLDYVNHQTSLNNGQAQVDPDGMV 302 Query 290 RIVVAEQNPGVTNWVETLGHRRGFLQFRWQRVSRELTEADGPTVELVDFDAIPAALPHYQ 349 R+VV+E+NPGVTNW+ET+GH RG LQFRWQRVSRELT DGP VE+V I LPH+ Sbjct 303 RMVVSEKNPGVTNWIETVGHPRGILQFRWQRVSRELTPQDGPAVEIVAVADIAKHLPHFD 362 Query 350 HNKISEDDWRARIALRQRQIATRMLG 375 N I+ +DW ARIA RQ I RMLG Sbjct 363 TNAITAEDWAARIAQRQAAIDNRMLG 388 >gi|169631048|ref|YP_001704697.1| hypothetical protein MAB_3969 [Mycobacterium abscessus ATCC 19977] gi|169243015|emb|CAM64043.1| Conserved hypothetical protein [Mycobacterium abscessus] Length=393 Score = 494 bits (1272), Expect = 1e-137, Method: Compositional matrix adjust. Identities = 228/386 (60%), Positives = 289/386 (75%), Gaps = 13/386 (3%) Query 3 SDPLREAIAEAEQLVAAAPHIETEADLLEGLQYLAGCIAGCMHLAFDYERDHPFLQSGTG 62 + P +AIAEAE+LVA+APHIE+EADLLEGL+YLAG IA +HL +++ +HP L SGTG Sbjct 8 TQPFTDAIAEAEKLVASAPHIESEADLLEGLEYLAGSIAASLHLVYNFSTEHPVLLSGTG 67 Query 63 PFTKMGLDNPDTLYFGTRLQANRDYVVSGRRGTTTDLSFQLLGGEYTDYNVPASQAAFDD 122 PFTKMGLDNPD LYF T++ + DYV+SG RG+T DL+FQLL YTD +VP S AFDD Sbjct 68 PFTKMGLDNPDFLYFATQIDGHHDYVLSGTRGSTVDLNFQLLDSAYTDRDVPESVTAFDD 127 Query 123 RELDIAADGSFEWRLRPSA-------------PGQLVIREVYGDWSQQRGTLAIARLDTV 169 R L I DGS+ + + P QL++RE Y DW++ RGT+AI+R DT+ Sbjct 128 RNLAIHEDGSYRVSIGAAPVTGCDTHIPIAPRPAQLIVREAYNDWTENRGTVAISRADTL 187 Query 170 GTAPPPLTRELMEKRYATAGSQLVNRVKTWLQFPQWFYLNIPVNTMVAPRLTPGGLATQY 229 G PLT+E + RY AG L+NRVKTWLQFPQWFY+N P N PR+TPGGL++Q+ Sbjct 188 GIGAAPLTKEFVLGRYIGAGHHLINRVKTWLQFPQWFYMNNPPNVFEPPRITPGGLSSQF 247 Query 230 SSAGHFELRPGQALVITVPVSDAPYLGFQLGSMWYISLDYINHQTSLNASQAQADPDGKV 289 SS G+FEL PGQAL++TVP SDAPY GFQLGSMWY+SLDYINHQTSLN+ Q+ DPDGK+ Sbjct 248 SSVGYFELEPGQALMVTVPKSDAPYQGFQLGSMWYVSLDYINHQTSLNSHQSHVDPDGKI 307 Query 290 RIVVAEQNPGVTNWVETLGHRRGFLQFRWQRVSRELTEADGPTVELVDFDAIPAALPHYQ 349 R+V+++QNPGV NW+ET+GHRRGFL+FRWQR +R + + DGP E+VDFD I +LP + Sbjct 308 RLVISDQNPGVVNWIETVGHRRGFLKFRWQRTNRPILDEDGPRAEVVDFDRIKVSLPFHA 367 Query 350 HNKISEDDWRARIALRQRQIATRMLG 375 + ++ WR+RIA RQ +ATRMLG Sbjct 368 DHIVTAQQWRSRIAARQTAVATRMLG 393 >gi|54024426|ref|YP_118668.1| hypothetical protein nfa24570 [Nocardia farcinica IFM 10152] gi|54015934|dbj|BAD57304.1| hypothetical protein [Nocardia farcinica IFM 10152] Length=386 Score = 491 bits (1265), Expect = 6e-137, Method: Compositional matrix adjust. Identities = 234/385 (61%), Positives = 293/385 (77%), Gaps = 13/385 (3%) Query 3 SDPLREAIAEAEQLVAAAPHIETEADLLEGLQYLAGCIAGCMHLAFDYERDHPFLQSGTG 62 + P +A+A AEQ++ APHI TE DL+EG YLAG I CM LA+ Y+RD PF T Sbjct 3 TQPFADAMAAAEQIITEAPHIRTEQDLVEGYDYLAGSIRACMQLAWAYDRDFPFFARSTA 62 Query 63 PFTKMGLDNPDTLYFGTRLQANRDYVVSGRRGTTTDLSFQLLGGEYTDYNVPASQAAFDD 122 +TKMGLDNPDTLYF T L+ + +YVV+GRRGTT DLSFQ+L G Y+ +VP S+ AFDD Sbjct 63 QYTKMGLDNPDTLYFHTFLRPDAEYVVTGRRGTTRDLSFQVLNGNYSPVDVPDSETAFDD 122 Query 123 RELDIAADGSFEWRLRPSAPGQ------------LVIREVYGDWSQQRGTLAIARLDTVG 170 RELDIA DGS+E RL P PG+ LV+REV+GDWS+Q G+L I R+DT+G Sbjct 123 RELDIAPDGSYELRLGP-GPGRRGYVHLAEDSAMLVVREVFGDWSEQPGSLRIQRVDTIG 181 Query 171 TAPPPLTRELMEKRYATAGSQLVNRVKTWLQFPQWFYLNIPVNTMVAPRLTPGGLATQYS 230 APP +R+L+ KRY AG LV+R++T+L FP+WFYLN+PVNTM PR TPGGLATQ+S Sbjct 182 VAPPAPSRDLLAKRYEIAGKMLVSRLRTFLTFPEWFYLNLPVNTMTEPRPTPGGLATQFS 241 Query 231 SAGHFELRPGQALVITVPVSDAPYLGFQLGSMWYISLDYINHQTSLNASQAQADPDGKVR 290 S GH++L QA++ITVP SDAPY GFQLGSMWYISLDYINHQTSLNA QA+ DPDG +R Sbjct 242 SVGHYDLTDDQAMIITVPKSDAPYQGFQLGSMWYISLDYINHQTSLNADQARVDPDGMIR 301 Query 291 IVVAEQNPGVTNWVETLGHRRGFLQFRWQRVSRELTEADGPTVELVDFDAIPAALPHYQH 350 +VVAE++PG+ NW+E GH RG+LQFRWQR+SREL DGPTVE+V D +PA LP+Y+ Sbjct 302 LVVAERDPGLVNWIERTGHARGYLQFRWQRLSRELKPEDGPTVEIVPMDELPARLPYYED 361 Query 351 NKISEDDWRARIALRQRQIATRMLG 375 +++ ++W+ARIA RQ +A RMLG Sbjct 362 ARVTPEEWKARIAARQVAVAERMLG 386 >gi|269126970|ref|YP_003300340.1| hypothetical protein Tcur_2756 [Thermomonospora curvata DSM 43183] gi|268311928|gb|ACY98302.1| hypothetical protein Tcur_2756 [Thermomonospora curvata DSM 43183] Length=392 Score = 463 bits (1191), Expect = 2e-128, Method: Compositional matrix adjust. Identities = 223/384 (59%), Positives = 277/384 (73%), Gaps = 17/384 (4%) Query 9 AIAEAEQLVAAAPHIETEADLLEGLQYLAGCIAGCMHLAFDYERDHPFLQSGTGPFTKMG 68 AIAEAEQ++ +APH++TE DL EGL YLAG I C+H+A+ Y+RD PF TGP+TK+G Sbjct 9 AIAEAEQIIRSAPHVQTEQDLAEGLDYLAGSIKACLHMAWAYQRDFPFFARSTGPYTKLG 68 Query 69 LDNPDTLYFGTRLQANRDYVVSGRRGTTTDLSFQLLGGEYTDYNVPASQAAFDDRELDIA 128 LDNPDTLYF L+ + +YVV+GRRGTT DLSFQ++ G+Y+ P S AFDDRE+ IA Sbjct 69 LDNPDTLYFHAYLRDDAEYVVTGRRGTTADLSFQVMNGDYSPARSPDSLTAFDDREIQIA 128 Query 129 ADGSFEWRLR-------------PSAPGQLVIREVYGDWSQQR-GTLAIARLDTVGTAPP 174 DGSFE R P L++REV+ DW +R G + I R DT+G+APP Sbjct 129 PDGSFELRFGPPKPNPGPNYFALPPGSAMLIVREVFSDWDTERPGEIRIHRADTLGSAPP 188 Query 175 PLTRELMEKRYATAGSQLVNRVKTWLQFPQWFYLNIPVNTMVAPRLTPGGLATQYSSAGH 234 P T E + KRY AG LV R++T+L FPQW YLN+PVNTM PR TPGGLATQYSS GH Sbjct 189 PPTAEQIAKRYEVAGRMLVARLRTFLAFPQWHYLNLPVNTMTEPRPTPGGLATQYSSVGH 248 Query 235 FELRPGQALVITVPV---SDAPYLGFQLGSMWYISLDYINHQTSLNASQAQADPDGKVRI 291 ++L + +VITVP SDAPY GFQLGSMWYISLDYINHQTSL A QA+ DPDG +R Sbjct 249 YDLDDEEVMVITVPAAAKSDAPYQGFQLGSMWYISLDYINHQTSLTADQARIDPDGMIRY 308 Query 292 VVAEQNPGVTNWVETLGHRRGFLQFRWQRVSRELTEADGPTVELVDFDAIPAALPHYQHN 351 VV+E++PG+ NW+E GHRRGFLQ RWQR+SREL DGPTVE++ FD +P LP+Y+ Sbjct 309 VVSERDPGLANWIERTGHRRGFLQIRWQRLSRELKADDGPTVEIMPFDELPRRLPYYEQQ 368 Query 352 KISEDDWRARIALRQRQIATRMLG 375 +++ +W ARIA RQ +A RMLG Sbjct 369 RVTPQEWAARIAARQSAVARRMLG 392 >gi|302527705|ref|ZP_07280047.1| conserved hypothetical protein [Streptomyces sp. AA4] gi|302436600|gb|EFL08416.1| conserved hypothetical protein [Streptomyces sp. AA4] Length=388 Score = 446 bits (1147), Expect = 3e-123, Method: Compositional matrix adjust. Identities = 218/387 (57%), Positives = 282/387 (73%), Gaps = 14/387 (3%) Query 3 SDPLREAIAEAEQLVAAAPHIETEADLLEGLQYLAGCIAGCMHLAFDYERDHPFLQSGTG 62 ++PL AIAEAE+++A APH+ TE DL+EG YLAG I + A+ Y+RD P+ TG Sbjct 2 TEPLAGAIAEAEKIIAEAPHVRTEQDLIEGYDYLAGSIRASVQTAWAYDRDFPYFTLSTG 61 Query 63 PFTKMGLDNPDTLYFGTRLQANRDYVVSGRRGTTTDLSFQLLGGEYTDYNVPASQAAFDD 122 P+TKMGLDNPDTLYF ++ +R+YVV+G RGTT DLSFQ+L G+YT VP S AFDD Sbjct 62 PYTKMGLDNPDTLYFNANIREDREYVVTGTRGTTADLSFQVLNGDYTPVEVPDSVTAFDD 121 Query 123 RELDIAADGSFEWRLRPSAP-------------GQLVIREVYGDW-SQQRGTLAIARLDT 168 R++ +AADGSFE R P+ P LV+REVY DW +++RGT+ + DT Sbjct 122 RDIPVAADGSFEIRFGPAKPDPGPGYFVLGPGSSMLVVREVYSDWATERRGTIQLRCADT 181 Query 169 VGTAPPPLTRELMEKRYATAGSQLVNRVKTWLQFPQWFYLNIPVNTMVAPRLTPGGLATQ 228 G APP LTR MEKRY G L++R++T+L FP+WFYLN+PVNTM PR TPGGL TQ Sbjct 182 TGQAPPALTRTAMEKRYGVTGKILLSRLRTFLAFPKWFYLNLPVNTMTEPRSTPGGLPTQ 241 Query 229 YSSAGHFELRPGQALVITVPVSDAPYLGFQLGSMWYISLDYINHQTSLNASQAQADPDGK 288 YSSAGH+EL + +++TVP SDAPY G QLGS WY+SLDY++HQTSL A QA+ADPDGK Sbjct 242 YSSAGHYELADDEVMIVTVPRSDAPYQGIQLGSTWYVSLDYVHHQTSLTADQARADPDGK 301 Query 289 VRIVVAEQNPGVTNWVETLGHRRGFLQFRWQRVSRELTEADGPTVELVDFDAIPAALPHY 348 +R V++E++PGV NW+E GH RG++Q RWQR+SRELT ADGP VE+V FD +P LP++ Sbjct 302 LRFVISERDPGVANWLERTGHDRGYVQIRWQRLSRELTAADGPEVEVVKFDELPGRLPYH 361 Query 349 QHNKISEDDWRARIALRQRQIATRMLG 375 +++ ++W RIA RQ +A RMLG Sbjct 362 SEARVTPEEWAQRIAARQAAVAARMLG 388 >gi|326382884|ref|ZP_08204574.1| hypothetical protein SCNU_08093 [Gordonia neofelifaecis NRRL B-59395] gi|326198474|gb|EGD55658.1| hypothetical protein SCNU_08093 [Gordonia neofelifaecis NRRL B-59395] Length=387 Score = 442 bits (1138), Expect = 3e-122, Method: Compositional matrix adjust. Identities = 220/387 (57%), Positives = 276/387 (72%), Gaps = 12/387 (3%) Query 1 VYSDPLREAIAEAEQLVAAAPHIETEADLLEGLQYLAGCIAGCMHLAFDYERDHPFLQSG 60 + +D ++AEAE+L++ APHI T DL +G QYLA CI +H + E PF G Sbjct 1 MLTDDFATSLAEAEKLISTAPHIRTPQDLHDGYQYLAACIQAVLHNEWSTELAAPFFIHG 60 Query 61 TGPFTKMGLDNPDTLYFGTRLQANRDYVVSGRRGTTTDLSFQLLGGEYTDYNVPASQAAF 120 GPFTK GLDNPDT+YF T + + +Y+V G+RGTT DLSFQLL G +TD VPAS AAF Sbjct 61 AGPFTKQGLDNPDTMYFNTDISDDAEYLVVGKRGTTADLSFQLLAGSHTDSEVPASVAAF 120 Query 121 DDRELDIAADGSFEWRLRPS---APG---------QLVIREVYGDWSQQRGTLAIARLDT 168 DDR+LDI DG+F RL P APG L++REVY DW++QRG + + RLDT Sbjct 121 DDRDLDIDEDGNFTLRLGPDPTPAPGYLPLPKGTTMLLVREVYSDWTEQRGQIRVERLDT 180 Query 169 VGTAPPPLTRELMEKRYATAGSQLVNRVKTWLQFPQWFYLNIPVNTMVAPRLTPGGLATQ 228 G P LT E EK + AG L+ R+KTWLQFP+WFYLN+PVNT+ PR+TPGGL TQ Sbjct 181 AGQPLPALTAERAEKHFDKAGRDLIMRIKTWLQFPEWFYLNLPVNTLTEPRITPGGLTTQ 240 Query 229 YSSAGHFELRPGQALVITVPVSDAPYLGFQLGSMWYISLDYINHQTSLNASQAQADPDGK 288 YSS GH++L +A++ITVP SDAPY G QLGS+WYISLDYIN QTSLN +Q+Q DPDG Sbjct 241 YSSVGHYDLAADEAMIITVPESDAPYQGLQLGSLWYISLDYINRQTSLNTTQSQTDPDGM 300 Query 289 VRIVVAEQNPGVTNWVETLGHRRGFLQFRWQRVSRELTEADGPTVELVDFDAIPAALPHY 348 +RIVV+EQNPG+ NW++T+GH RG+LQFRWQR+SR LTEADGPT E+V +P LP+Y Sbjct 301 IRIVVSEQNPGIVNWLDTIGHARGYLQFRWQRLSRPLTEADGPTCEIVKISEVPGKLPYY 360 Query 349 QHNKISEDDWRARIALRQRQIATRMLG 375 N+I+ D + RIA R+ + RMLG Sbjct 361 ADNQITPDAFAERIADRKAGFSNRMLG 387 >gi|343925874|ref|ZP_08765389.1| hypothetical protein GOALK_050_01690 [Gordonia alkanivorans NBRC 16433] gi|343764225|dbj|GAA12315.1| hypothetical protein GOALK_050_01690 [Gordonia alkanivorans NBRC 16433] Length=398 Score = 430 bits (1105), Expect = 2e-118, Method: Compositional matrix adjust. Identities = 210/386 (55%), Positives = 258/386 (67%), Gaps = 13/386 (3%) Query 3 SDPLREAIAEAEQLVAAAPHIETEADLLEGLQYLAGCIAGCMHLAFDYERDHPFLQSGTG 62 + PL +AIAEAE+LVA+A ETE DL EG YLAG IA + L HP + TG Sbjct 13 TKPLTDAIAEAEKLVASAEFAETEQDLAEGYDYLAGSIAAIIQLVRGRSLSHPNFVTSTG 72 Query 63 PFTKMGLDNPDTLYFGTRLQANRDYVVSGRRGTTTDLSFQLLGGEYTDYNVPASQAAFDD 122 P TKMGLDNPDTLY+ ++ YVV GRRGTTTDLSFQ+L G+YT VP + AFDD Sbjct 73 PSTKMGLDNPDTLYYHADVEPTGTYVVRGRRGTTTDLSFQVLRGDYTPSAVPGGEDAFDD 132 Query 123 RELDIAADGSFEWRLRP-------------SAPGQLVIREVYGDWSQQRGTLAIARLDTV 169 R L IA DG+FE P L +REVY DW++++G++ + R+DTV Sbjct 133 RRLTIADDGTFELTFGPGIADPPDNYFALGEGASMLAVREVYSDWTERKGSITVERVDTV 192 Query 170 GTAPPPLTRELMEKRYATAGSQLVNRVKTWLQFPQWFYLNIPVNTMVAPRLTPGGLATQY 229 GTAP + +RYATAG L R+ TW FP+WFYL+ PVNT PR TPGGL+TQ+ Sbjct 193 GTAPEEADLARVARRYATAGKMLTARINTWFNFPKWFYLDEPVNTFTPPRQTPGGLSTQF 252 Query 230 SSAGHFELRPGQALVITVPVSDAPYLGFQLGSMWYISLDYINHQTSLNASQAQADPDGKV 289 SS GH+ L P +A+VIT+P SDAPY GFQLGSMWYISLDY+NHQTSLN++QAQ DPDG + Sbjct 253 SSVGHYRLGPDEAMVITIPKSDAPYQGFQLGSMWYISLDYVNHQTSLNSAQAQVDPDGMI 312 Query 290 RIVVAEQNPGVTNWVETLGHRRGFLQFRWQRVSRELTEADGPTVELVDFDAIPAALPHYQ 349 R+VV+ ++PGV NW+ET G +G LQFRWQR + GPT +V D + A LPH++ Sbjct 313 RMVVSHRDPGVANWIETTGREKGILQFRWQRSDSPIGPELGPTATVVGLDDVAAHLPHFE 372 Query 350 HNKISEDDWRARIALRQRQIATRMLG 375 HNKI W RIA RQR A RMLG Sbjct 373 HNKIDAAGWSDRIAARQRAFAERMLG 398 >gi|300784753|ref|YP_003765044.1| hypothetical protein AMED_2848 [Amycolatopsis mediterranei U32] gi|299794267|gb|ADJ44642.1| conserved hypothetical protein [Amycolatopsis mediterranei U32] gi|340526177|gb|AEK41382.1| hypothetical protein RAM_14470 [Amycolatopsis mediterranei S699] Length=396 Score = 426 bits (1095), Expect = 3e-117, Method: Compositional matrix adjust. Identities = 206/383 (54%), Positives = 273/383 (72%), Gaps = 15/383 (3%) Query 8 EAIAEAEQLVAAAPHIETEADLLEGLQYLAGCIAGCMHLAFDYERDHPFLQSGTGPFTKM 67 +AI EAE+L+A AP +TE LLEG YLAG I + +A+ Y+RD P+ + TGP+TKM Sbjct 14 DAIVEAEKLIAEAPPAQTEQGLLEGYDYLAGSIRASLQMAWAYQRDFPYFTASTGPYTKM 73 Query 68 GLDNPDTLYFGTRLQANRDYVVSGRRGTTTDLSFQLLGGEYTDYNVPASQAAFDDRELDI 127 GLDNPDTLYF ++A+R+Y+V+G RGTT DLSFQ+L G+Y+ VP S AAFDDR ++I Sbjct 74 GLDNPDTLYFNANIRADREYLVTGVRGTTADLSFQVLNGDYSPVEVPDSLAAFDDRAIEI 133 Query 128 AADGSFEWRLRPS--APG-----------QLVIREVYGDW-SQQRGTLAIARLDTVGTAP 173 DG FE R P+ PG LV+REVY DW +++RG + I +DT G AP Sbjct 134 GPDGRFELRFGPARENPGPNYFVLGEGSSMLVVREVYSDWATERRGEIRIRCVDTAGQAP 193 Query 174 PPLTRELMEKRYATAGSQLVNRVKTWLQFPQWFYLNIPVNTMVAPRLTPGGLATQYSSAG 233 P R + KRY G L++R+KT+L FP+WFY ++PVNT+ PR TPGGL TQ+SSAG Sbjct 194 PVPDRSALAKRYGVTGKILLSRLKTFLAFPKWFYDDLPVNTLTEPRSTPGGLTTQFSSAG 253 Query 234 HFELRPGQALVITVP-VSDAPYLGFQLGSMWYISLDYINHQTSLNASQAQADPDGKVRIV 292 H+EL P +A+++TVP +DAPY G QLGS+WY+SLDYINHQTSL A QA+ DPDGK+R V Sbjct 254 HYELGPEEAMIVTVPRCADAPYQGIQLGSLWYVSLDYINHQTSLTADQARVDPDGKIRFV 313 Query 293 VAEQNPGVTNWVETLGHRRGFLQFRWQRVSRELTEADGPTVELVDFDAIPAALPHYQHNK 352 +AE++PG+ NW+E GH RG+LQ RWQR++R+L DGP VE+V D +P LP++ + Sbjct 314 LAERDPGLANWLELTGHERGYLQIRWQRLARDLGPDDGPVVEVVKADELPDRLPYHADAR 373 Query 353 ISEDDWRARIALRQRQIATRMLG 375 ++ + W ARIA RQ +A RMLG Sbjct 374 VTPEQWTARIAARQDAVAARMLG 396 >gi|159038407|ref|YP_001537660.1| hypothetical protein Sare_2834 [Salinispora arenicola CNS-205] gi|157917242|gb|ABV98669.1| conserved hypothetical protein [Salinispora arenicola CNS-205] Length=385 Score = 425 bits (1092), Expect = 7e-117, Method: Compositional matrix adjust. Identities = 214/380 (57%), Positives = 271/380 (72%), Gaps = 14/380 (3%) Query 8 EAIAEAEQLVAAAPHIETEADLLEGLQYLAGCIAGCMHLAFDYERDHPFLQSGTGPFTKM 67 A+AEAE+++ A H+ E DL+EG YLAG + + +A+ Y+RDHP+ TGP+TKM Sbjct 8 NAVAEAERVIVGAAHVRGEQDLVEGYDYLAGGVRASIQMAWAYDRDHPYFVRSTGPYTKM 67 Query 68 GLDNPDTLYFGTRLQANRDYVVSGRRGTTTDLSFQLLGGEYTDYNVPASQAAFDDRELDI 127 GLDNPDTLYF L+ + +YVV+GRRG+T DLSFQ+L G Y+ NVP S AFDDRE+++ Sbjct 68 GLDNPDTLYFHAWLRDDAEYVVTGRRGSTADLSFQILDGSYSPVNVPDSLTAFDDREIEV 127 Query 128 AADGSFEWRLRPS---------APGQ--LVIREVYGDWSQQR-GTLAIARLDTVGTAPPP 175 ADG+FE R P APG LV+REV+ DW+ +R GTL I R DT+G APPP Sbjct 128 GADGAFEIRFGPGLSGRNAFPLAPGSAMLVVREVFSDWAAERPGTLRIHRADTLGAAPPP 187 Query 176 LTRELMEKRYATAGSQLVNRVKTWLQFPQWFYLNIPVNTMVAPRLTPGGLATQYSSAGHF 235 LT + KRY AG L R++T+L F + FYLN+PVNT+ PRLTPGGLATQYSS GH+ Sbjct 188 LTEATLAKRYTVAGKILTGRIRTFLAFAERFYLNLPVNTLTPPRLTPGGLATQYSSVGHY 247 Query 236 ELRPGQALVITVPVSDAPYLGFQLGSMWYISLDYINHQTSLNASQAQADPDGKVRIVVAE 295 +L GQA+V+TVP SDAPY G QLGSMWY+SLDY NHQTSL QA+ DPDG +R V++E Sbjct 248 QLTDGQAMVVTVPASDAPYQGIQLGSMWYVSLDYSNHQTSLTVPQARVDPDGMIRYVISE 307 Query 296 QNPGVTNWVETLGHRRGFLQFRWQRVSRELTEADGPTVELVDFDAIPAALPHYQHNKISE 355 ++PGV NW+E GH RG++Q RWQR+SRELT ADGP V++V+ D +P +P+ H I Sbjct 308 RDPGVANWLECTGHDRGYVQLRWQRLSRELTAADGPRVDVVEVDDLPKQVPY--HEPIGP 365 Query 356 DDWRARIALRQRQIATRMLG 375 WR RIA RQ A RMLG Sbjct 366 TAWRERIAARQAATAARMLG 385 >gi|145595162|ref|YP_001159459.1| hypothetical protein Strop_2637 [Salinispora tropica CNB-440] gi|145304499|gb|ABP55081.1| hypothetical protein Strop_2637 [Salinispora tropica CNB-440] Length=385 Score = 414 bits (1063), Expect = 2e-113, Method: Compositional matrix adjust. Identities = 215/385 (56%), Positives = 268/385 (70%), Gaps = 14/385 (3%) Query 3 SDPLREAIAEAEQLVAAAPHIETEADLLEGLQYLAGCIAGCMHLAFDYERDHPFLQSGTG 62 + P AIAEAE+++A A H+ DL+EG YLAG + + +A+ Y+R+ P+ TG Sbjct 3 TQPFVNAIAEAERVIAEAAHVRGRQDLVEGYDYLAGGVRSSIQMAWSYDREFPYFVRSTG 62 Query 63 PFTKMGLDNPDTLYFGTRLQANRDYVVSGRRGTTTDLSFQLLGGEYTDYNVPASQAAFDD 122 P+TKMGLDNPDTLYF L+ + +YVV+GRRG+T DLSFQ+L G Y+ NVP S AFDD Sbjct 63 PYTKMGLDNPDTLYFHAWLRDDAEYVVTGRRGSTADLSFQILDGSYSPVNVPGSLTAFDD 122 Query 123 RELDIAADGSFEWRLRPS---------APGQ--LVIREVYGDWSQQR-GTLAIARLDTVG 170 RE+DI DG+FE R P APG LV+REV+ DW+ +R G L I R DT G Sbjct 123 REVDIGPDGTFEIRFGPGLSGPNAFPLAPGSAMLVVREVFSDWAAERPGMLRIHRADTSG 182 Query 171 TAPPPLTRELMEKRYATAGSQLVNRVKTWLQFPQWFYLNIPVNTMVAPRLTPGGLATQYS 230 APPPLT E + +RYA A L R+ T+L F + FYLN+PVNT+ PRLTPGGLATQYS Sbjct 183 VAPPPLTEETLARRYAVASKILTGRIHTFLAFAERFYLNLPVNTLTPPRLTPGGLATQYS 242 Query 231 SAGHFELRPGQALVITVPVSDAPYLGFQLGSMWYISLDYINHQTSLNASQAQADPDGKVR 290 S GH++L QA+VITVPVSDAPY G QLGSMWYISLDY NHQTSL QA+ DPDG +R Sbjct 243 SVGHYQLAEDQAMVITVPVSDAPYQGIQLGSMWYISLDYSNHQTSLTVPQARIDPDGMIR 302 Query 291 IVVAEQNPGVTNWVETLGHRRGFLQFRWQRVSRELTEADGPTVELVDFDAIPAALPHYQH 350 VV+E++PGV NW+E GH RG++Q RWQR+S LT ADGP VE+V D +P +P+Y+ Sbjct 303 YVVSERDPGVANWLERTGHDRGYVQLRWQRLSHALTGADGPRVEVVAVDDLPKQVPYYE- 361 Query 351 NKISEDDWRARIALRQRQIATRMLG 375 +I W+ RIA RQ A RMLG Sbjct 362 -RIGRAAWQERIAARQAATAARMLG 385 >gi|262200920|ref|YP_003272128.1| hypothetical protein Gbro_0923 [Gordonia bronchialis DSM 43247] gi|262084267|gb|ACY20235.1| hypothetical protein Gbro_0923 [Gordonia bronchialis DSM 43247] Length=403 Score = 413 bits (1062), Expect = 2e-113, Method: Compositional matrix adjust. Identities = 212/388 (55%), Positives = 262/388 (68%), Gaps = 17/388 (4%) Query 3 SDPLREAIAEAEQLVAAAPHIETEADLLEGLQYLAGCIAGCMHLAFDYERDHPFLQSGTG 62 + PL +AIA AE L+A+A +E+E DL EG YLAG IA + L + HP + TG Sbjct 18 TKPLTDAIAAAEALIASAEFVESEQDLAEGYDYLAGSIAAVVQLVRSRQPSHPNFITSTG 77 Query 63 PFTKMGLDNPDTLYFGTRLQANRDYVVSGRRGTTTDLSFQLLGGEYTDYNVPASQAAFDD 122 P TKM LDNPDTLY+ +++ Y+V G RG T DLSFQ+L G+YT VP AFDD Sbjct 78 PSTKMALDNPDTLYYHADIESGGTYLVRGHRGNTADLSFQVLRGDYTPSEVPGGDDAFDD 137 Query 123 RELDIAADGSFEWRLRP-------------SAPGQLVIREVYGDWSQQRGTLAIARLDTV 169 R + I ADG+FE P L +REVY DW+ Q+G+++I R+DT+ Sbjct 138 RRIPIDADGNFEITFGPPVDSPADGYFVLGEGASMLAVREVYSDWAAQKGSISIERVDTI 197 Query 170 GTAP--PPLTRELMEKRYATAGSQLVNRVKTWLQFPQWFYLNIPVNTMVAPRLTPGGLAT 227 GTAP P L R + KRYATAG L R+ TW FP+WFYL+ PVNT APRLTPGGLAT Sbjct 198 GTAPDEPDLARVM--KRYATAGKMLTARINTWFNFPKWFYLDEPVNTFTAPRLTPGGLAT 255 Query 228 QYSSAGHFELRPGQALVITVPVSDAPYLGFQLGSMWYISLDYINHQTSLNASQAQADPDG 287 Q+SS GHF L +A++ITVP SDAPY GFQLGSMWYISLDY+NHQTSLN++QAQ DPDG Sbjct 256 QFSSVGHFRLADDEAMIITVPKSDAPYQGFQLGSMWYISLDYVNHQTSLNSAQAQVDPDG 315 Query 288 KVRIVVAEQNPGVTNWVETLGHRRGFLQFRWQRVSRELTEADGPTVELVDFDAIPAALPH 347 +R+VV+ +NPGV NW+ET G G LQFRWQRV + DGPT ++V D +PA LP+ Sbjct 316 MIRMVVSRRNPGVANWIETTGRTTGILQFRWQRVDAPVRPEDGPTAQVVGVDDVPAHLPY 375 Query 348 YQHNKISEDDWRARIALRQRQIATRMLG 375 +HN+I + WR RIA RQR A RMLG Sbjct 376 LEHNRIDDAGWRERIAARQRAFAERMLG 403 >gi|326384573|ref|ZP_08206252.1| hypothetical protein SCNU_16613 [Gordonia neofelifaecis NRRL B-59395] gi|326196707|gb|EGD53902.1| hypothetical protein SCNU_16613 [Gordonia neofelifaecis NRRL B-59395] Length=396 Score = 405 bits (1041), Expect = 7e-111, Method: Compositional matrix adjust. Identities = 200/367 (55%), Positives = 248/367 (68%), Gaps = 15/367 (4%) Query 24 ETEADLLEGLQYLAGCIAGCMHLAFDYERDHPFLQSGTGPFTKMGLDNPDTLYFGTRLQA 83 ET+A+ EGL YLAG I+ + +A E+ HP+ + TGP++KMGLDNPDTLY+ ++ Sbjct 30 ETDAERAEGLDYLAGGISSILQVARAGEKSHPYFVTSTGPYSKMGLDNPDTLYYHATVEP 89 Query 84 NRDYVVSGRRGTTTDLSFQLLGGEYTDYNVPASQAAFDDRELDIAADGSFEWRLRP---- 139 + YVV G RGTT DL+FQ+L G YT +VP + AFDDR + IA DGSFE P Sbjct 90 DATYVVRGVRGTTADLAFQVLRGNYTADDVPGGEVAFDDRVIPIADDGSFEITFGPERPD 149 Query 140 SAPG----------QLVIREVYGDWSQQ-RGTLAIARLDTVGTAPPPLTRELMEKRYATA 188 +APG L +REVY DW+ + +G++ I R+D VG P LT + KRYA A Sbjct 150 AAPGTHFVLGEGATMLSVREVYSDWATEVKGSITIERVDAVGVPPVELTTARIAKRYAIA 209 Query 189 GSQLVNRVKTWLQFPQWFYLNIPVNTMVAPRLTPGGLATQYSSAGHFELRPGQALVITVP 248 L RV TW FP+WFYL PVNT PR TPGGL+TQYSS GHF+L G+++V+TVP Sbjct 210 AKMLTARVNTWFNFPKWFYLGEPVNTFTEPRTTPGGLSTQYSSVGHFDLPAGKSMVVTVP 269 Query 249 VSDAPYLGFQLGSMWYISLDYINHQTSLNASQAQADPDGKVRIVVAEQNPGVTNWVETLG 308 SDAPY GFQLGSMWYISLDY+NHQTSLN++QAQ DPDG +R+V+A ++PGV NWVET Sbjct 270 QSDAPYQGFQLGSMWYISLDYVNHQTSLNSAQAQVDPDGMIRMVIAAEDPGVANWVETTH 329 Query 309 HRRGFLQFRWQRVSRELTEADGPTVELVDFDAIPAALPHYQHNKISEDDWRARIALRQRQ 368 RRG LQFRWQR +T GPT +VD +PA LP Y+ NKI W RIA+RQR Sbjct 330 RRRGILQFRWQRTDAPITAEQGPTAVVVDDADVPAHLPFYETNKIDAAGWAERIAVRQRA 389 Query 369 IATRMLG 375 A RMLG Sbjct 390 FARRMLG 396 >gi|319948612|ref|ZP_08022736.1| hypothetical protein ES5_04498 [Dietzia cinnamea P4] gi|319437693|gb|EFV92689.1| hypothetical protein ES5_04498 [Dietzia cinnamea P4] Length=394 Score = 375 bits (963), Expect = 7e-102, Method: Compositional matrix adjust. Identities = 192/389 (50%), Positives = 252/389 (65%), Gaps = 17/389 (4%) Query 3 SDPLREAIAEAEQLVAAAPHIETEADLLEGLQYLAGCIAGCMHLAFDYERDHPFLQSGTG 62 + PL +A+AEAE+++ +APH+ T+ D+ EGL+YL G I G + R HP L TG Sbjct 5 TGPLAKALAEAEEIIRSAPHVRTDEDVAEGLEYLLGTIRGAIETGQHRGRTHPQLFEATG 64 Query 63 PFTKMGLDNPDTLYFGTRLQANRDYVVSGRRGTTTDLSFQLLGGEYTDYNVPASQAAFDD 122 P+TKMGLDNPDTLYF L +Y + GRRGTT DLSFQ++ G Y+ AS AAFDD Sbjct 65 PYTKMGLDNPDTLYFYANLADGAEYEIEGRRGTTADLSFQVMAGTYSADERAASHAAFDD 124 Query 123 RELDIAADGSFEWRLRPSA-------PGQLV---------IREVYGDWSQQR-GTLAIAR 165 R L+I G + +RL P+ PG +V +REV+ DWS++ G+ I R Sbjct 125 RRLEIDERGRYSFRLGPARYDDDEGDPGYVVLHPGSSMIAVREVFSDWSREEAGSAIIRR 184 Query 166 LDTVGTAPPPLTRELMEKRYATAGSQLVNRVKTWLQFPQWFYLNIPVNTMVAPRLTPGGL 225 LDTVGTAP P++ EK YA LV R++TWL FP WF+ P NT+ PR TPGGL Sbjct 185 LDTVGTAPEPVSLAGQEKFYAKLAEALVGRLRTWLAFPGWFFGEQPRNTLNVPRQTPGGL 244 Query 226 ATQYSSAGHFELRPGQALVITVPVSDAPYLGFQLGSMWYISLDYINHQTSLNASQAQADP 285 TQ+SSAG FEL P +A+VI+VPV+ PY GFQLGSMWY SL+Y++HQTSL A QA Sbjct 245 TTQFSSAGIFELGPDEAIVISVPVAGVPYQGFQLGSMWYASLEYVHHQTSLTADQAHVTS 304 Query 286 DGKVRIVVAEQNPGVTNWVETLGHRRGFLQFRWQRVSRELTEADGPTVELVDFDAIPAAL 345 DG + +VV+E++PG+ NWV TLG R G +QFRWQR + GPTV++V FD +P + Sbjct 305 DGLIHLVVSERDPGLANWVGTLGRREGIMQFRWQRTDGLIGPELGPTVKVVPFDQLPDEV 364 Query 346 PHYQHNKISEDDWRARIALRQRQIATRML 374 P ++ +++ + WR RIA RQ A R L Sbjct 365 PCHEELRVTGEQWRERIAARQDAFARRGL 393 >gi|326331631|ref|ZP_08197919.1| hypothetical protein NBCG_03070 [Nocardioidaceae bacterium Broad-1] gi|325950430|gb|EGD42482.1| hypothetical protein NBCG_03070 [Nocardioidaceae bacterium Broad-1] Length=390 Score = 350 bits (898), Expect = 2e-94, Method: Compositional matrix adjust. Identities = 184/380 (49%), Positives = 240/380 (64%), Gaps = 11/380 (2%) Query 3 SDPLREAIAEAEQLVAAAPHIETEADLLEGLQYLAGCIAGCMHLAFDYERDHPFLQSGTG 62 ++PL+ AIAEAE+L+A AP I TEAD LEG +YL+G I M AFDY+ + P + T Sbjct 13 TEPLQRAIAEAEELIANAPFIRTEADRLEGYEYLSGRIRMAMQTAFDYDLEQPLFVNPTH 72 Query 63 PFTKMGLDNPDTLYFGTRLQANRDYVVSGRRGTTTDLSFQLLGGEYTDYNVPASQAAFDD 122 F+K GLDNPD +Y L+ +YVV GRRGT+ DLSFQ++GG YT S AFDD Sbjct 73 QFSKQGLDNPDAIYLNAYLREGVEYVVRGRRGTSADLSFQVMGGAYTADAAATSLMAFDD 132 Query 123 RELDIAADGSFEWRLRPSAPG--QLVIREVYGDW-SQQRGTLAIARLDTVGTAPPPLTRE 179 R+L + DGSFE+ + PG L++REV+ DW ++ RGT+ I R DT+G PLTRE Sbjct 133 RKLQLDDDGSFEFTY-TAEPGAKTLIVREVFNDWDTETRGTITIERPDTLGRPRRPLTRE 191 Query 180 LMEKRYATAGSQLVNRVKTWLQFPQWFYLNIPVNTMVAPRLTPGGLATQYSSAGHFELRP 239 L+ K+Y A L ++TW FPQ+F PVNT+ P TPGGL +Q+SS GH+EL Sbjct 192 LLRKKYEVAARSLTGSIQTWFAFPQFFQYKEPVNTLTVPARTPGGLESQFSSIGHYELAE 251 Query 240 GQALVITVP-VSDAPYLGFQLGSMWYISLDYINHQTSLNASQAQADPDGKVRIVVAEQNP 298 +ALV+ VP D Y GFQ+GS WY S DY HQTSL +QA DPDG +R V++E+ P Sbjct 252 DEALVVEVPRCDDCSYQGFQIGSDWYASTDYETHQTSLTKAQAVTDPDGVMRFVISERPP 311 Query 299 ----GVTNWVETLGHRRGFLQFRWQRVSRELTEADGPTVELVDFDAIPAALPHYQHNKIS 354 + NW+ET GHR G + RWQR+ R+LT ADGP V V + LPH + ++ Sbjct 312 LDGKPIANWLETTGHRTGSVMLRWQRLERDLTAADGPVVHKVSLGDVRDLLPHTE--TLN 369 Query 355 EDDWRARIALRQRQIATRML 374 + RI RQR +A RML Sbjct 370 PGGYAERITARQRAVARRML 389 >gi|119718590|ref|YP_925555.1| hypothetical protein Noca_4371 [Nocardioides sp. JS614] gi|119539251|gb|ABL83868.1| conserved hypothetical protein [Nocardioides sp. JS614] Length=383 Score = 350 bits (898), Expect = 2e-94, Method: Compositional matrix adjust. Identities = 181/380 (48%), Positives = 243/380 (64%), Gaps = 12/380 (3%) Query 5 PLREAIAEAEQLVAAAPHIETEADLLEGLQYLAGCIAGCMHLAFDYERDHPFLQSGTGPF 64 PL++AIAEAE+L+ +AP I TE DLLEG YL+G I + +AFD++ P + T F Sbjct 7 PLQDAIAEAEKLIESAPFIRTEQDLLEGYDYLSGRIRMALQMAFDHDLARPLFINPTHQF 66 Query 65 TKMGLDNPDTLYFGTRLQANRDYVVSGRRGTTTDLSFQLLGGEYTDYNVPASQAAFDDRE 124 ++ GLDNPD +YF L+ +YVV G RG+T DLSFQ++GG YT + S AFDDRE Sbjct 67 SRQGLDNPDAIYFNAYLEEGVEYVVRGVRGSTADLSFQVMGGAYTADSAATSMLAFDDRE 126 Query 125 LDIAADGSFEWRLRPSAPG--QLVIREVYGDW-SQQRGTLAIARLDTVGTAPPPLTRELM 181 LD+A DGSFE+ + PG +++REV+ DW +++RG + I R DT+G PLTR + Sbjct 127 LDLAEDGSFEFSY-VAEPGAKTMIVREVFNDWDTEERGRIWIERTDTLGLPAAPLTRARL 185 Query 182 EKRYATAGSQLVNRVKTWLQFPQWFYLNIPVNTMVAPRLTPGGLATQYSSAGHFELRPGQ 241 E++Y A L ++TWL FPQ+F P N PR TPGGL++Q SS GH+EL Q Sbjct 186 ERKYEVAAKLLTGSIRTWLAFPQFFERQEPANQPTPPRSTPGGLSSQRSSIGHYELDDDQ 245 Query 242 ALVITVP-VSDAPYLGFQLGSMWYISLDYINHQTSLNASQAQADPDGKVRIVVAEQNPG- 299 AL+ITVP +D Y Q+GS WY+S DY HQTSL +QA DPDG +R V++E++P Sbjct 246 ALIITVPECTDCAYQAIQIGSDWYVSTDYETHQTSLTKAQAVVDPDGLMRFVISERSPAG 305 Query 300 ----VTNWVETLGHRRGFLQFRWQRVSRELTEADGPTVELVDFDAIPAALPHYQHNKISE 355 + NW+E GHR G L RWQR+ R+L ADGP E+V +P LPH+ I+ Sbjct 306 PDARLANWLECTGHRTGSLMLRWQRLERDLGPADGPVAEVVALADVPDRLPHF--TPITT 363 Query 356 DDWRARIALRQRQIATRMLG 375 + + RIA RQR +A RML Sbjct 364 EQYAERIAARQRSVARRMLS 383 >gi|329895450|ref|ZP_08271031.1| hypothetical protein IMCC3088_1491 [gamma proteobacterium IMCC3088] gi|328922333|gb|EGG29679.1| hypothetical protein IMCC3088_1491 [gamma proteobacterium IMCC3088] Length=426 Score = 157 bits (397), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 113/383 (30%), Positives = 178/383 (47%), Gaps = 21/383 (5%) Query 9 AIAEAEQLVAAAPHIETEADLLEGLQYLAGCIAGCMHLAFDYERDHPFLQSGTGPFTKMG 68 A+ +AE V + ++E D L+ + + + D P + P K G Sbjct 45 AMQQAESEVRDFEYFDSEQDQARAYLLLSRALLKGIEEQLLNDPDFPLFRI-MDPRMKEG 103 Query 69 LDNPDTLYFGTRLQANRDYVVSGRRGTTTDLSFQLLGGE-YTDYNVPASQAAFDDRELDI 127 DNPD Y ++ N DYV+ G G+ L QL G + + AF+D ELD Sbjct 104 GDNPDQRYSFAEIKGNTDYVIRGELGSAARLEVQLYAGRPWANDGESLDYLAFEDIELD- 162 Query 128 AADGSFEWR-LRPSAPGQL------------VIREVYGDWSQQ-RGTLAIARLDTVGTAP 173 +G FE R L+ GQ+ ++R++Y DW+ Q G L I R+ G Sbjct 163 -REGQFEIRVLKQCGQGQMNCVTNPENTTTVMVRQIYADWNTQPAGELHIDRIGFEGRPK 221 Query 174 PPLTRELMEKRYATAGSQLVNRVKTWLQFPQWFYLNIPVNTMVAPRLTP---GGLATQYS 230 T E + +R + TW Q + Y + +V+P + GG+ ++ Sbjct 222 AAPTPESVAQRIEAMAYTMHQSAVTWPQMVKERYTDRRPPNVVSPLMDTFKFGGVRGRWM 281 Query 231 SAGHFELRPGQALVITVPVSDAPYLGFQLGSMWYISLDYINHQTSLNASQAQADPDGKVR 290 ++GHF+L+PGQALVI APY G QL +W+ SL+Y N TSL Q+ PDG + Sbjct 282 ASGHFKLQPGQALVIKSWPVGAPYQGIQLTDLWFASLEYANRVTSLTQRQSVLAPDGAIY 341 Query 291 IVVAEQNPGVTNWVETLGHRRGFLQFRWQRVSRELTEADGPTVELVDFDAIPAALPHYQH 350 V+ + G NW++T+G RG R+ V + + P+ +LVD D + A +P ++ Sbjct 342 YVITSEETGYPNWLDTMGLERGAFIMRYDGVGGAIEPSRWPSAQLVDIDDLNAVIPGFED 401 Query 351 NKISEDDWRARIALRQRQIATRM 373 K++ D + ALR+ + R Sbjct 402 TKLTPDGRDQQRALRRAHVQQRF 424 >gi|148556194|ref|YP_001263776.1| hypothetical protein Swit_3292 [Sphingomonas wittichii RW1] gi|148501384|gb|ABQ69638.1| hypothetical protein Swit_3292 [Sphingomonas wittichii RW1] Length=362 Score = 150 bits (378), Expect = 5e-34, Method: Compositional matrix adjust. Identities = 110/348 (32%), Positives = 160/348 (46%), Gaps = 22/348 (6%) Query 10 IAEAEQLVAAAPHIETEADLLEGLQYLAGC--IAGCMHLAFDYERDHPFLQSGTGPFTKM 67 + +A LV A T D +EG +YL+ IA MH+ + + D P + P K+ Sbjct 20 LEKAGDLVFDAEVAGTPIDQVEGYRYLSRLLRIALDMHME-NADPDFPGFYQASHPTAKI 78 Query 68 GLDNPDTLYFGTRLQANRDYVVSGRRGTTTDLSFQLLGGEYTDYNVPASQAAFDDRELDI 127 G DNPD LY + R Y ++GRRG+ LSF Y AS D ++ Sbjct 79 GADNPDNLYLNASISGARRYRITGRRGSVPILSFGSKANRYAVDGTMASTGELDAADIRF 138 Query 128 AADGSFE-----------WRLRPSAPGQLVIREVYGDW-SQQRGTLAIARLDTVGTAPPP 175 DGSFE W L++R+ + D S+ T+ I +D P P Sbjct 139 EPDGSFEIIASKERANGNWLPLADDSSMLLVRQTFLDRDSEVPATVRIEAIDAPRATPEP 198 Query 176 LTRELMEKRYATAGSQLVNRVKTWLQFPQWFY---LNIPVNTMVAPRLTPGGLATQYSSA 232 LT +E+ + A + + +T+L + F LN T GG T + Sbjct 199 LTLGKLEQGFDRAVAFVEGTARTFLHWADLFKAEQLNRLATTDQTMFFKAGGDPTIHYLH 258 Query 233 GHFELRPGQALVITVPVSDAPYLGFQLGSMWYISLDYINHQTSLNASQAQADPDGKVRIV 292 G+++L PG+ALVI PV D + FQL ++W SLDY H+ +N A+ + DG V IV Sbjct 259 GYWKLAPGEALVIETPVPDCTFWNFQLDNIWMESLDYRFHRIHVNKHGARTNADGSVTIV 318 Query 293 VAEQNPGVTNWVETLGHRRGFLQFRWQRVSRELTEADGPTVELVDFDA 340 VA ++PG NW++T GH G + RW TE P ++V D Sbjct 319 VAARDPGYGNWIDTAGHDHGTMLLRWTGA----TEHPVPQTKVVKIDG 362 >gi|312197133|ref|YP_004017194.1| hypothetical protein FraEuI1c_3312 [Frankia sp. EuI1c] gi|311228469|gb|ADP81324.1| hypothetical protein FraEuI1c_3312 [Frankia sp. EuI1c] Length=412 Score = 137 bits (344), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 102/304 (34%), Positives = 146/304 (49%), Gaps = 40/304 (13%) Query 66 KMGLDNPDTLYFGTRLQANRDYVVSGRRGTTTDLSFQLLGGEYTDYNVPASQAAFDDREL 125 K GLD PD Y ++ + DY V G GT L FQ++GG T N+ + EL Sbjct 97 KWGLDCPDCAYLNATIRGDLDYRVWGNVGTVGYLGFQVMGGLATYGNI-------RNDEL 149 Query 126 DIAADGSFEWRLRP---------SAP--GQLVIREVYGDW-SQQRGTLAIARLDTVGTAP 173 + A+G+FE + P S P LV+R+ +GDW ++QR L I + V P Sbjct 150 ETDAEGNFELWVGPTKREGNYLASTPETNTLVVRQFFGDWDTEQRARLDI---ELVSPVP 206 Query 174 PPLTRELMEKRYATAGSQLVNRVKTWLQFPQWFYLNIPVNTMVAPR--LTP-------GG 224 + + + A +Q + R+ WL+ F+ +I R P GG Sbjct 207 ADASADRLVATPARVAAQ-IERIGGWLEANIKFWHDIEAMGQANRRNAFDPATVKSDMGG 265 Query 225 LATQYSSAGHFELRPGQALVITVPVSDAPYLGFQLGSMWYISLDYINHQTSLNASQAQAD 284 + GHF+L P +AL+I + A Y +G+ W+ SLDY TSLN QA D Sbjct 266 AQENINGWGHFDLAPDEALIIEATPAQARYWSLHIGNFWWESLDYATRHTSLNFRQAVLD 325 Query 285 PDGKVRIVVAEQNPGVTNWVETLGHRRGFLQFRWQRVSRELTEADGP--TVELVDFDAIP 342 DG R VVA ++PGV NW++T+GH +G L FRW + GP ++V FD+I Sbjct 326 DDGVFRAVVAHRDPGVPNWLDTMGHTKGPLLFRW------VVADHGPDAITKVVPFDSIR 379 Query 343 AALP 346 LP Sbjct 380 DHLP 383 >gi|183980927|ref|YP_001849218.1| hypothetical protein MMAR_0906 [Mycobacterium marinum M] gi|183174253|gb|ACC39363.1| conserved hypothetical protein [Mycobacterium marinum M] Length=435 Score = 135 bits (339), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 116/416 (28%), Positives = 183/416 (44%), Gaps = 59/416 (14%) Query 7 REAIAEAEQLVAAAPHIETEADLLEGLQYLAGCIAGCMHLAFDYERDHPFLQSGTGPFTK 66 R+A+ AE AP + T A L +G YL G + + AF D P+ + P K Sbjct 25 RDAVDSAE---LHAPPV-TAAGLADGYGYLLGFVFSGIERAFGENPDFPYFRRAIQPLDK 80 Query 67 MGLDNPDTLYFGTRLQANRDYVVSGRRGTTTDLSFQLLGGEYTDYN---------VPASQ 117 +DN D LY + + Y V+GR + L+ +TDY +P + Sbjct 81 ATIDNADALYLSAPIDGAQSYRVTGRFVGPKPPQY-LIFEAHTDYAGDTGGLAELMPGGR 139 Query 118 ---AAFDDRELDIAADGSFEWRLRPSAPGQ-------------------LVIREVYGDWS 155 A D +L + DG FE L P PG+ L+ R ++ DW Sbjct 140 VVTGALDTADLAVGEDGRFEILLGPRRPGEHTGNFIATRTPDGTATARFLIARILFHDWE 199 Query 156 QQRG-TLAIARLDTVGTAPPPLTRELMEKRYATAGSQLVNRVKTWLQFPQWF-------- 206 + L I ++ G P P ++ + G+ + N+++ W +F Sbjct 200 HEMSPDLHIVQIGKQGAQPEPADPAVVAQNMRRLGTIVENQMRFWNEFYDVVLEAHGDKN 259 Query 207 ---YLNIPVNTMVAPRLTP----GGLATQYSSAGHFELRPGQALVITVPVSDA-PYLGFQ 258 + +P N++ P L GG +T G ++LR +AL++ V V Y+GF Sbjct 260 GDGFTLMPRNSLNEPALANLAMGGGQSTNVYCGGVYDLRADEALLVEVVVPVPPAYMGFH 319 Query 259 LGSMWYISLDYINHQTSLNASQAQADPDGKVRIVVAEQNPGVTNWVETLGHRRGFLQFRW 318 L ++W SLDY NH SLN Q++ D D ++R V+A+ +PGV NW++T G GFL RW Sbjct 320 LSNLWGESLDYANHACSLNGFQSEPDADARIRYVIADTDPGVPNWLDTAGRLGGFLTLRW 379 Query 319 QRVS--RELTEADGPTVELVDFDAIPAALPHYQHNKISEDDWRARIALRQRQIATR 372 EL +A V L ++ LP +S ++ R +I++RQ + R Sbjct 380 TYCDPPSELPKASAVKVPLA---SVRQHLP-ADTRTVSVEERRRQISVRQEHVQRR 431 >gi|240170323|ref|ZP_04748982.1| hypothetical protein MkanA1_13503 [Mycobacterium kansasii ATCC 12478] Length=452 Score = 134 bits (336), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 122/417 (30%), Positives = 174/417 (42%), Gaps = 66/417 (15%) Query 20 APHIETEADLLEGLQYLAGCIAGCMHLAFDYERDHPFLQSGTGPFTKMGLDNPDTLYFGT 79 AP +L EG +YL G + + AF + P+ + G K +DN D +Y T Sbjct 34 APPQSGPRELAEGYRYLLGFVHSAVERAFFGDPAFPYFRRAIGVLDKATIDNADAMYLST 93 Query 80 RLQANRDYVVSGR-------RGT----TTDLSFQLLGGE-YTDY------------NVPA 115 + +Y ++G+ RG + ++ Q L E +T Y V Sbjct 94 PIDGRYEYRITGQVPDSRHWRGEPPAPSGAIAPQYLIVEAHTGYAGDTGDLAELRPGVRG 153 Query 116 SQAAFDDRELDIAADGSFEWRLRPSAPG-----------------------QLVIREVYG 152 + D EL I DG FE L P P + +R +Y Sbjct 154 NTGKLDSAELTIGQDGRFEIILAPERPAGYEGNFISTQRISKGSDVHYFAEYVTVRALYH 213 Query 153 DWSQQRG-TLAIARLDTVGTAPPPLTRELMEKRYATAGSQLVNRVKTWLQFPQWFY---- 207 DW ++ L I RLD VG PP L G + N+ + W +F Sbjct 214 DWEREEAPELLIHRLDKVGEHPPALDAPAAAAAMRRVGEIVDNQTRFWNKFYDVVLEAHG 273 Query 208 -------LNIPVNTMVAPR----LTPGGLATQYSSAGHFELRPGQALVITVPVSDAP-YL 255 +P N AP T GG +T S G ++L + L+I V + P Y+ Sbjct 274 DRNGDGLTFMPRNGFNAPAGASLATGGGQSTNVYSGGMYDLAEDEVLLIDTEVFEPPAYM 333 Query 256 GFQLGSMWYISLDYINHQTSLNASQAQADPDGKVRIVVAEQNPGVTNWVETLGHRRGFLQ 315 GF L ++W S DY NH +SLN +QA+ D DG R VVA ++PGV NW++T G RRGF+ Sbjct 334 GFHLANVWGESHDYANHVSSLNGTQARRDDDGHYRYVVAHRDPGVPNWLDTTGLRRGFMT 393 Query 316 FRWQRVSRELTEADGPTVELVDFDAIPAALPHYQHNKISEDDWRARIALRQRQIATR 372 RW S+ T V FD I LP + S +D R +I +RQ + R Sbjct 394 MRWT-YSQPTERLPVVTARKVVFDEIDDHLP-ASTPRFSPEDRREQIRVRQEHVQRR 448 >gi|118616462|ref|YP_904794.1| hypothetical protein MUL_0659 [Mycobacterium ulcerans Agy99] gi|118568572|gb|ABL03323.1| conserved hypothetical protein [Mycobacterium ulcerans Agy99] Length=435 Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 115/422 (28%), Positives = 179/422 (43%), Gaps = 71/422 (16%) Query 7 REAIAEAEQLVAAAPHIETEADLLEGLQYLAGCIAGCMHLAFDYERDHPFLQSGTGPFTK 66 R+A+ AE AP + T A L +G YL G + + A D P+ + P K Sbjct 25 RDAVDSAE---LHAPPV-TAAGLADGYGYLLGFVFSGIERALGENPDFPYFRRAIQPLDK 80 Query 67 MGLDNPDTLYFGTRLQANRDYVVSGR------------------RGTTTDLSFQLLGGEY 108 +DN D LY + + Y V+GR G T L+ + GG Sbjct 81 ATIDNADALYLSAPIDGAQSYRVTGRFVGPKPPQYLIFEAHIDYAGDTGGLAELMPGGRV 140 Query 109 TDYNVPASQAAFDDRELDIAADGSFEWRLRPSAPGQ-------------------LVIRE 149 A D +L + DG FE L P PG+ L+ R Sbjct 141 V-------TGALDTADLAVGEDGRFEILLGPRRPGEHTGNFIATRTPDGTATARFLIARI 193 Query 150 VYGDWSQQRG-TLAIARLDTVGTAPPPLTRELMEKRYATAGSQLVNRVKTWLQFPQWF-- 206 ++ DW + L I ++ G P P ++ + G+ + N+++ W +F Sbjct 194 LFHDWEHEMSPDLHIVQIGKQGAQPEPADPAVVAQNMRRLGTIVENQMRFWNEFYDVVLE 253 Query 207 ---------YLNIPVNTMVAPRLTP----GGLATQYSSAGHFELRPGQALVITVPVSDA- 252 + +P N++ P L GG +T G ++LR +AL++ V V Sbjct 254 AHGDKNGDGFTLMPRNSLNEPALANLAMGGGQSTNVYCGGVYDLRADEALLVEVVVPVPP 313 Query 253 PYLGFQLGSMWYISLDYINHQTSLNASQAQADPDGKVRIVVAEQNPGVTNWVETLGHRRG 312 Y+GF L ++W SLDY NH SLN Q++ D D ++R V+A+ +PGV NW++T G G Sbjct 314 AYMGFHLSNLWGESLDYANHACSLNGFQSEPDADARMRYVIADTDPGVPNWLDTAGRLGG 373 Query 313 FLQFRWQRVS--RELTEADGPTVELVDFDAIPAALPHYQHNKISEDDWRARIALRQRQIA 370 FL RW EL +A V L ++ LP +S ++ R +I++RQ + Sbjct 374 FLTLRWTYCDPPSELPKASAVKVPLA---SVRQHLP-ADTRTVSVEERRRQISVRQEHVQ 429 Query 371 TR 372 R Sbjct 430 RR 431 >gi|329894123|ref|ZP_08270108.1| hypothetical protein IMCC3088_239 [gamma proteobacterium IMCC3088] gi|328923295|gb|EGG30615.1| hypothetical protein IMCC3088_239 [gamma proteobacterium IMCC3088] Length=410 Score = 129 bits (325), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 106/358 (30%), Positives = 160/358 (45%), Gaps = 32/358 (8%) Query 28 DLLEGLQYLAGCIAGCMHLAFD-YERDHPFLQSGTGPFTKMGLDNPDTLYFGTRLQANRD 86 D E YL ++ + FD Y D P L+ G K GLD+ + Y G ++++ Sbjct 58 DAAEANLYLVQQLSAAIAQEFDEYRIDTPLLRVGATTIHKWGLDSSEAKYQGAAIESSGL 117 Query 87 YVVSGRRGTTTDLSFQLLGGEYTDYNVPASQAAFDDRELDIAADGSFEWRLRPSAP---- 142 Y +SG G+ S Q + S A+ D +L A G FE + S P Sbjct 118 YRLSGTLGSAQITSIQ----SVMSADTFKSYASIDQTQLQTNASGEFELVIGLSKPEEWQ 173 Query 143 ----------GQLVIREVYGDWSQQR-GTLAIARLDTVGTAPPPLTRELMEKRYATAGSQ 191 +L+IRE +GDW + T + RLDT PPP+T E + + Sbjct 174 GPFLQLQPTSNRLLIREYFGDWPNEAPSTFLLERLDT-AHPPPPMTMEKSAELMQAIAKR 232 Query 192 LVNRVKTWLQFPQWFYLNIPVNTMVAPRLTPG---GLATQYSSAGHFELRPGQALVITVP 248 R W + Q N RL G GL+ G F++ +AL+I + Sbjct 233 FERRAPFWNGWVQ----NSRSQLKNQLRLLVGNQQGLSNNAYGDGWFDIADDEALLIELE 288 Query 249 VSDAPYLGFQLGSMWYISLDYINHQTSLNASQAQADPDGKVRIVVAEQNPGVTNWVETLG 308 A FQLG+ W+ S++YI S+N+ QA D DG +R+V+A+Q+PG+ NW++T G Sbjct 289 PPKAQMWSFQLGNYWWESIEYITGFGSINSFQAHTDSDGIIRLVIAKQDPGILNWLDTGG 348 Query 309 HRRGFLQFRWQRVSRELTEADGPTVELVDFDAIPAALPHYQHNKISEDDWRARIALRQ 366 H G + +R+Q + T T LV + + A LP ++D +AR RQ Sbjct 349 HNEGSVMYRFQNTTSSPTP----TATLVKLNELTALLPEDTALATAQDREQARTKRRQ 402 >gi|342859772|ref|ZP_08716425.1| hypothetical protein MCOL_12873 [Mycobacterium colombiense CECT 3035] gi|342132904|gb|EGT86124.1| hypothetical protein MCOL_12873 [Mycobacterium colombiense CECT 3035] Length=412 Score = 128 bits (322), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 110/362 (31%), Positives = 163/362 (46%), Gaps = 44/362 (12%) Query 10 IAEAEQLVAAAPHIETEADLLEGLQYLAGCIAGCMHLAFDYERDHPFLQ---SGTGPFTK 66 + +A Q V + P D G+++L +A + A ++ +P L+ + T Sbjct 42 LNDAAQTVESEPASRNRIDAAAGIRHLLVLLAAGVDEALRFD-PNPALRVQRTSTDDIVT 100 Query 67 MGLDNPDTLYFGTRLQANRDYVVSGRRGTTTDLSFQLLGGEYTDYNVPASQAAFDDRELD 126 G++ PD LY L+ Y + G RGT + Q + G + A+ D EL+ Sbjct 101 WGMECPDCLYTRAALRGGESYRLYGNRGTARYVGLQTMNG------ITATANELVD-ELE 153 Query 127 IAADGSFEWRLRPSA-PGQ-------------LVIREVYGDW-SQQRGTLAIARL-DTVG 170 DG+FE L S PG+ L +R + DW ++ +L I RL D V Sbjct 154 TDPDGNFEVVLSASKQPGRAGNWMRIDGEHPTLTVRHFFYDWDTEVASSLRIERLGDPVR 213 Query 171 TAPPPLTRELMEKRYATA-GSQLVNRVKTWLQF-----PQWFYLNIPVNTMVAPRLTPGG 224 P P+ R TA G + + + +LQF P F I M G Sbjct 214 ATPRPVDPYSAVTRQLTALGDFVADNLAFFLQFGAAAPPNGFLPAIDRTDM-------GA 266 Query 225 LATQYSSAGHFELRPGQALVITVPVSDAPYLGFQLGSMWYISLDYINHQTSLNASQAQAD 284 A G +EL+PGQALV+ V Y F +G+ W+ ++ Y HQ+SLNA QA D Sbjct 267 AAENRPVIGRWELQPGQALVVEVEPPRGVYWSFSIGNPWWETIHYGRHQSSLNAHQAAVD 326 Query 285 PDGKVRIVVAEQNPGVTNWVETLGHRRGFLQFRWQRVSRELTEADGPTVELVDFDAIPAA 344 DG VR+V+ +++PG+ NW++T GH G + R R T P +V FDAI Sbjct 327 SDGLVRVVLCDRDPGIANWLDTAGHSNGPIILRCVRTETAPT----PRTRVVPFDAIRTE 382 Query 345 LP 346 LP Sbjct 383 LP 384 >gi|296165150|ref|ZP_06847699.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295899494|gb|EFG78951.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length=388 Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 115/388 (30%), Positives = 174/388 (45%), Gaps = 46/388 (11%) Query 10 IAEAEQLVAAAPHIETEADLLEGLQYLAGCIAGCMH--LAFDYERDHPFL---QSGTGPF 64 + EA + V + P DL G+++L +A + L FD HP L ++ T Sbjct 21 LREAARTVESDPVNRNRIDLAAGIRHLLVLLAAGIDEVLLFD---PHPVLSVRRTSTDDL 77 Query 65 TKMGLDNPDTLYFGTRLQANRDYVVSGRRGTTTDLSFQLLGGEYTDYNVPASQAAFDDRE 124 G++ PD LY L+ Y + G RGT + Q + G + A+ A D E Sbjct 78 VTWGMECPDCLYTRAVLRGGESYRLFGNRGTARYVGLQTMNG------IAATANALVD-E 130 Query 125 LDIAADGSFEWRLRPS-APGQ----------LVIREVYGDW-SQQRGTLAIARL-DTVGT 171 LD+ ADG+FE L PG L +R + DW ++ +L I R+ + V T Sbjct 131 LDVDADGNFEVVLSADDRPGNWMRIEGDRPTLTVRHFFYDWDTEVASSLRIERVGEAVET 190 Query 172 APPPLTRELMEKRYATA-GSQLVNRVKTWLQF-----PQWFYLNIPVNTMVAPRLTPGGL 225 P + + + R TA G + + + +LQF P F I M G Sbjct 191 TGPSVDPDTLVSRQITALGDFVADNLAFFLQFGVAASPNGFLPPIDRTDM-------GAA 243 Query 226 ATQYSSAGHFELRPGQALVITVPVSDAPYLGFQLGSMWYISLDYINHQTSLNASQAQADP 285 A G +EL P +AL++ V Y +G+ W+ ++ Y HQ+SLNA QA D Sbjct 244 AENRPVIGRWELGPDEALIVEVEPPQGLYWSLSIGNPWWETIHYGRHQSSLNAHQAVVDT 303 Query 286 DGKVRIVVAEQNPGVTNWVETLGHRRGFLQFRWQRVSRELTEADGPTVELVDFDAIPAAL 345 DG VR+V+ +PGV NW++T GH G + R R A P +V AI A L Sbjct 304 DGLVRVVLCPDDPGVANWLDTTGHSNGPIILRCVRTE----TAPTPAARVVPVGAIRAEL 359 Query 346 PHYQHNKISEDDWRARIALRQRQIATRM 373 P +++ + R+ +A R+R + R Sbjct 360 PP-DTTEVTPEQRRSVLAARRRAVQNRF 386 Lambda K H 0.320 0.136 0.417 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 718963958700 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40