BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv3532 Length=406 Score E Sequences producing significant alignments: (Bits) Value gi|31794708|ref|NP_857201.1| PPE family protein [Mycobacterium b... 795 0.0 gi|339633530|ref|YP_004725172.1| PPE family protein [Mycobacteri... 795 0.0 gi|289572184|ref|ZP_06452411.1| PPE family protein [Mycobacteriu... 794 0.0 gi|289440961|ref|ZP_06430705.1| PPE family protein [Mycobacteriu... 793 0.0 gi|308232493|ref|ZP_07416221.2| PPE family protein [Mycobacteriu... 791 0.0 gi|298527010|ref|ZP_07014419.1| ppe family protein [Mycobacteriu... 714 0.0 gi|289755661|ref|ZP_06515039.1| PPE family protein [Mycobacteriu... 712 0.0 gi|289445124|ref|ZP_06434868.1| PPE family protein [Mycobacteriu... 529 4e-148 gi|323717805|gb|EGB27002.1| hypothetical protein TMMG_00021 [Myc... 514 1e-143 gi|240173322|ref|ZP_04751980.1| PPE family protein [Mycobacteriu... 452 5e-125 gi|183983433|ref|YP_001851724.1| PPE family protein, PPE61 [Myco... 429 3e-118 gi|183983432|ref|YP_001851723.1| PPE family protein, PPE61_1 [My... 426 3e-117 gi|240169296|ref|ZP_04747955.1| PPE family protein [Mycobacteriu... 412 4e-113 gi|118618170|ref|YP_906502.1| PPE family protein [Mycobacterium ... 399 6e-109 gi|183980225|ref|YP_001848516.1| PPE family protein, PPE51_2 [My... 366 3e-99 gi|240168615|ref|ZP_04747274.1| PPE family protein [Mycobacteriu... 316 5e-84 gi|31794311|ref|NP_856804.1| PPE family protein [Mycobacterium b... 309 6e-82 gi|121639018|ref|YP_979242.1| PPE family protein [Mycobacterium ... 308 1e-81 gi|340628111|ref|YP_004746563.1| ppe family protein [Mycobacteri... 307 2e-81 gi|183981528|ref|YP_001849819.1| PPE family protein, PPE51 [Myco... 306 5e-81 gi|224991510|ref|YP_002646199.1| PPE family protein [Mycobacteri... 306 6e-81 gi|118617919|ref|YP_906251.1| PPE family protein [Mycobacterium ... 303 5e-80 gi|340628112|ref|YP_004746564.1| PPE family protein [Mycobacteri... 298 8e-79 gi|15842710|ref|NP_337747.1| PPE family protein [Mycobacterium t... 298 9e-79 gi|306782177|ref|ZP_07420514.1| PPE family protein [Mycobacteriu... 298 1e-78 gi|183981529|ref|YP_001849820.1| PPE family protein, PPE51_1 [My... 292 6e-77 gi|240168614|ref|ZP_04747273.1| PPE family protein, PPE51_2 [Myc... 285 1e-74 gi|118618187|ref|YP_906519.1| PPE family protein [Mycobacterium ... 282 8e-74 gi|167970194|ref|ZP_02552471.1| PPE family protein [Mycobacteriu... 281 1e-73 gi|118617918|ref|YP_906250.1| PPE family protein [Mycobacterium ... 279 6e-73 gi|323717804|gb|EGB27001.1| hypothetical protein TMMG_00020 [Myc... 276 4e-72 gi|183983449|ref|YP_001851740.1| PPE family protein, PPE51_3 [My... 268 1e-69 gi|289448814|ref|ZP_06438558.1| PPE family protein [Mycobacteriu... 260 3e-67 gi|289575846|ref|ZP_06456073.1| PPE family protein [Mycobacteriu... 250 3e-64 gi|240172861|ref|ZP_04751520.1| PPE family protein, PPE31 [Mycob... 227 2e-57 gi|41409283|ref|NP_962119.1| hypothetical protein MAP3185 [Mycob... 224 2e-56 gi|118466535|ref|YP_883168.1| PPE family protein [Mycobacterium ... 224 3e-56 gi|212596159|gb|ACJ35556.1| PPE33 [Mycobacterium avium subsp. av... 220 4e-55 gi|183982688|ref|YP_001850979.1| PPE family protein, PPE31_1 [My... 214 2e-53 gi|183982689|ref|YP_001850980.1| PPE family protein [Mycobacteri... 205 1e-50 gi|183981114|ref|YP_001849405.1| PPE family protein [Mycobacteri... 199 8e-49 gi|296167733|ref|ZP_06849950.1| PPE family protein [Mycobacteriu... 198 1e-48 gi|342861033|ref|ZP_08717682.1| PPE family protein [Mycobacteriu... 196 5e-48 gi|240169314|ref|ZP_04747973.1| PPE family protein [Mycobacteriu... 192 7e-47 gi|212596661|gb|ACJ35596.1| PPE32 [Mycobacterium intracellulare ... 192 1e-46 gi|118618459|ref|YP_906791.1| PPE family protein [Mycobacterium ... 192 1e-46 gi|57116920|ref|YP_177653.1| PPE family protein [Mycobacterium t... 192 1e-46 gi|148661613|ref|YP_001283136.1| PPE family protein [Mycobacteri... 191 1e-46 gi|289574372|ref|ZP_06454599.1| PPE family protein [Mycobacteriu... 191 3e-46 gi|289759264|ref|ZP_06518642.1| PPE family protein [Mycobacteriu... 190 3e-46 >gi|31794708|ref|NP_857201.1| PPE family protein [Mycobacterium bovis AF2122/97] gi|57117120|ref|YP_177984.1| PPE family protein [Mycobacterium tuberculosis H37Rv] gi|121639451|ref|YP_979675.1| PPE family protein [Mycobacterium bovis BCG str. Pasteur 1173P2] 50 more sequence titles Length=406 Score = 795 bits (2054), Expect = 0.0, Method: Compositional matrix adjust. Identities = 406/406 (100%), Positives = 406/406 (100%), Gaps = 0/406 (0%) Query 1 MFMDFAMLPPEVNSTRMYSGPGAGSLWAAAAAWDQVSAELQSAAETYRSVIASLTGWQWL 60 MFMDFAMLPPEVNSTRMYSGPGAGSLWAAAAAWDQVSAELQSAAETYRSVIASLTGWQWL Sbjct 1 MFMDFAMLPPEVNSTRMYSGPGAGSLWAAAAAWDQVSAELQSAAETYRSVIASLTGWQWL 60 Query 61 GPSSVRMGAAVTPYVEWLTTTAAQARQTATQITAAATGFEQAFAMTVPPPAIMANRAQVL 120 GPSSVRMGAAVTPYVEWLTTTAAQARQTATQITAAATGFEQAFAMTVPPPAIMANRAQVL Sbjct 61 GPSSVRMGAAVTPYVEWLTTTAAQARQTATQITAAATGFEQAFAMTVPPPAIMANRAQVL 120 Query 121 SLIATNFFGQNTAAIAALETQYAEMWEQDATAMYDYAATSAAARTLTPFTSPQQDTNSAG 180 SLIATNFFGQNTAAIAALETQYAEMWEQDATAMYDYAATSAAARTLTPFTSPQQDTNSAG Sbjct 121 SLIATNFFGQNTAAIAALETQYAEMWEQDATAMYDYAATSAAARTLTPFTSPQQDTNSAG 180 Query 181 LPAQSAEVSRATANAGAADGNWLGNLLEEIGILLLPIAPELTPFFLEAGEIVNAIPFPSI 240 LPAQSAEVSRATANAGAADGNWLGNLLEEIGILLLPIAPELTPFFLEAGEIVNAIPFPSI Sbjct 181 LPAQSAEVSRATANAGAADGNWLGNLLEEIGILLLPIAPELTPFFLEAGEIVNAIPFPSI 240 Query 241 VGDEFCLLDGLLAWYATIGSINNINSMGTGIIGAEKNLGILPELGSAAAAAAPPPADIAP 300 VGDEFCLLDGLLAWYATIGSINNINSMGTGIIGAEKNLGILPELGSAAAAAAPPPADIAP Sbjct 241 VGDEFCLLDGLLAWYATIGSINNINSMGTGIIGAEKNLGILPELGSAAAAAAPPPADIAP 300 Query 301 AFLAPLTSMAKSLSDGALRGPGEVSAAMRGAGTIGQMSVPPAWKAPAVTTVRAFDATPMT 360 AFLAPLTSMAKSLSDGALRGPGEVSAAMRGAGTIGQMSVPPAWKAPAVTTVRAFDATPMT Sbjct 301 AFLAPLTSMAKSLSDGALRGPGEVSAAMRGAGTIGQMSVPPAWKAPAVTTVRAFDATPMT 360 Query 361 TLPGGDAPAAGVPGLPGMPASGAGRAGVVPRYGVRLTVMTRPLSGG 406 TLPGGDAPAAGVPGLPGMPASGAGRAGVVPRYGVRLTVMTRPLSGG Sbjct 361 TLPGGDAPAAGVPGLPGMPASGAGRAGVVPRYGVRLTVMTRPLSGG 406 >gi|339633530|ref|YP_004725172.1| PPE family protein [Mycobacterium africanum GM041182] gi|339332886|emb|CCC28613.1| PPE family protein [Mycobacterium africanum GM041182] Length=406 Score = 795 bits (2052), Expect = 0.0, Method: Compositional matrix adjust. Identities = 405/406 (99%), Positives = 406/406 (100%), Gaps = 0/406 (0%) Query 1 MFMDFAMLPPEVNSTRMYSGPGAGSLWAAAAAWDQVSAELQSAAETYRSVIASLTGWQWL 60 MFMDFAMLPPEVNSTRMYSGPGAGSLWAAAAAWDQVSAELQSAAETYRS+IASLTGWQWL Sbjct 1 MFMDFAMLPPEVNSTRMYSGPGAGSLWAAAAAWDQVSAELQSAAETYRSMIASLTGWQWL 60 Query 61 GPSSVRMGAAVTPYVEWLTTTAAQARQTATQITAAATGFEQAFAMTVPPPAIMANRAQVL 120 GPSSVRMGAAVTPYVEWLTTTAAQARQTATQITAAATGFEQAFAMTVPPPAIMANRAQVL Sbjct 61 GPSSVRMGAAVTPYVEWLTTTAAQARQTATQITAAATGFEQAFAMTVPPPAIMANRAQVL 120 Query 121 SLIATNFFGQNTAAIAALETQYAEMWEQDATAMYDYAATSAAARTLTPFTSPQQDTNSAG 180 SLIATNFFGQNTAAIAALETQYAEMWEQDATAMYDYAATSAAARTLTPFTSPQQDTNSAG Sbjct 121 SLIATNFFGQNTAAIAALETQYAEMWEQDATAMYDYAATSAAARTLTPFTSPQQDTNSAG 180 Query 181 LPAQSAEVSRATANAGAADGNWLGNLLEEIGILLLPIAPELTPFFLEAGEIVNAIPFPSI 240 LPAQSAEVSRATANAGAADGNWLGNLLEEIGILLLPIAPELTPFFLEAGEIVNAIPFPSI Sbjct 181 LPAQSAEVSRATANAGAADGNWLGNLLEEIGILLLPIAPELTPFFLEAGEIVNAIPFPSI 240 Query 241 VGDEFCLLDGLLAWYATIGSINNINSMGTGIIGAEKNLGILPELGSAAAAAAPPPADIAP 300 VGDEFCLLDGLLAWYATIGSINNINSMGTGIIGAEKNLGILPELGSAAAAAAPPPADIAP Sbjct 241 VGDEFCLLDGLLAWYATIGSINNINSMGTGIIGAEKNLGILPELGSAAAAAAPPPADIAP 300 Query 301 AFLAPLTSMAKSLSDGALRGPGEVSAAMRGAGTIGQMSVPPAWKAPAVTTVRAFDATPMT 360 AFLAPLTSMAKSLSDGALRGPGEVSAAMRGAGTIGQMSVPPAWKAPAVTTVRAFDATPMT Sbjct 301 AFLAPLTSMAKSLSDGALRGPGEVSAAMRGAGTIGQMSVPPAWKAPAVTTVRAFDATPMT 360 Query 361 TLPGGDAPAAGVPGLPGMPASGAGRAGVVPRYGVRLTVMTRPLSGG 406 TLPGGDAPAAGVPGLPGMPASGAGRAGVVPRYGVRLTVMTRPLSGG Sbjct 361 TLPGGDAPAAGVPGLPGMPASGAGRAGVVPRYGVRLTVMTRPLSGG 406 >gi|289572184|ref|ZP_06452411.1| PPE family protein [Mycobacterium tuberculosis K85] gi|289536615|gb|EFD41193.1| PPE family protein [Mycobacterium tuberculosis K85] Length=406 Score = 794 bits (2050), Expect = 0.0, Method: Compositional matrix adjust. Identities = 405/406 (99%), Positives = 405/406 (99%), Gaps = 0/406 (0%) Query 1 MFMDFAMLPPEVNSTRMYSGPGAGSLWAAAAAWDQVSAELQSAAETYRSVIASLTGWQWL 60 MFMDFAMLPPEVNSTRMYSGPGAGSLWAAAAAWDQVSAELQSAAETYRSVIASLTGWQWL Sbjct 1 MFMDFAMLPPEVNSTRMYSGPGAGSLWAAAAAWDQVSAELQSAAETYRSVIASLTGWQWL 60 Query 61 GPSSVRMGAAVTPYVEWLTTTAAQARQTATQITAAATGFEQAFAMTVPPPAIMANRAQVL 120 GPSSVRMGAAVTPYVEWLTTTAAQARQTATQITAAATGFEQAFAMTVPPPAIMANRAQVL Sbjct 61 GPSSVRMGAAVTPYVEWLTTTAAQARQTATQITAAATGFEQAFAMTVPPPAIMANRAQVL 120 Query 121 SLIATNFFGQNTAAIAALETQYAEMWEQDATAMYDYAATSAAARTLTPFTSPQQDTNSAG 180 SLIATNFFGQNTAAIAALETQYAEMWEQDATAMYDYAATSAAARTLTPFTSPQQDTNSAG Sbjct 121 SLIATNFFGQNTAAIAALETQYAEMWEQDATAMYDYAATSAAARTLTPFTSPQQDTNSAG 180 Query 181 LPAQSAEVSRATANAGAADGNWLGNLLEEIGILLLPIAPELTPFFLEAGEIVNAIPFPSI 240 LPAQSAEVSRATANAGAADGNWLGNLLEEIGILLLPIAPELTPFFLEAGEIVNAIPFPSI Sbjct 181 LPAQSAEVSRATANAGAADGNWLGNLLEEIGILLLPIAPELTPFFLEAGEIVNAIPFPSI 240 Query 241 VGDEFCLLDGLLAWYATIGSINNINSMGTGIIGAEKNLGILPELGSAAAAAAPPPADIAP 300 VGDEFCLLDGLLAWYATIGSINNINSMGTGIIGAEKNLGILPELGSAAAAAAPPPADIAP Sbjct 241 VGDEFCLLDGLLAWYATIGSINNINSMGTGIIGAEKNLGILPELGSAAAAAAPPPADIAP 300 Query 301 AFLAPLTSMAKSLSDGALRGPGEVSAAMRGAGTIGQMSVPPAWKAPAVTTVRAFDATPMT 360 AFLAPLTSMAKSLSDGALRGPGEVSAAMRGAGTIGQMSVPPAWKAPAVTTVRAFDATPMT Sbjct 301 AFLAPLTSMAKSLSDGALRGPGEVSAAMRGAGTIGQMSVPPAWKAPAVTTVRAFDATPMT 360 Query 361 TLPGGDAPAAGVPGLPGMPASGAGRAGVVPRYGVRLTVMTRPLSGG 406 TLPGGD PAAGVPGLPGMPASGAGRAGVVPRYGVRLTVMTRPLSGG Sbjct 361 TLPGGDVPAAGVPGLPGMPASGAGRAGVVPRYGVRLTVMTRPLSGG 406 >gi|289440961|ref|ZP_06430705.1| PPE family protein [Mycobacterium tuberculosis T46] gi|289571773|ref|ZP_06452000.1| PPE family protein [Mycobacterium tuberculosis T17] gi|289752245|ref|ZP_06511623.1| PPE family protein [Mycobacterium tuberculosis T92] gi|289413880|gb|EFD11120.1| PPE family protein [Mycobacterium tuberculosis T46] gi|289545527|gb|EFD49175.1| PPE family protein [Mycobacterium tuberculosis T17] gi|289692832|gb|EFD60261.1| PPE family protein [Mycobacterium tuberculosis T92] Length=406 Score = 793 bits (2049), Expect = 0.0, Method: Compositional matrix adjust. Identities = 405/406 (99%), Positives = 405/406 (99%), Gaps = 0/406 (0%) Query 1 MFMDFAMLPPEVNSTRMYSGPGAGSLWAAAAAWDQVSAELQSAAETYRSVIASLTGWQWL 60 MFMDFAMLPPEVNSTRMYSGPGAGSLWAAAAAWDQVSAELQSAAETYRSVIASLTGWQWL Sbjct 1 MFMDFAMLPPEVNSTRMYSGPGAGSLWAAAAAWDQVSAELQSAAETYRSVIASLTGWQWL 60 Query 61 GPSSVRMGAAVTPYVEWLTTTAAQARQTATQITAAATGFEQAFAMTVPPPAIMANRAQVL 120 GPSSVRMGAAVTPYVEWLTTTAAQARQTATQITAAATGFEQAFAMTVPPPAIMANRAQVL Sbjct 61 GPSSVRMGAAVTPYVEWLTTTAAQARQTATQITAAATGFEQAFAMTVPPPAIMANRAQVL 120 Query 121 SLIATNFFGQNTAAIAALETQYAEMWEQDATAMYDYAATSAAARTLTPFTSPQQDTNSAG 180 SLIATNFFGQNTAAIAALETQYAEMWEQDATAMYDYAATSAAARTLTPFTSPQQDTNSAG Sbjct 121 SLIATNFFGQNTAAIAALETQYAEMWEQDATAMYDYAATSAAARTLTPFTSPQQDTNSAG 180 Query 181 LPAQSAEVSRATANAGAADGNWLGNLLEEIGILLLPIAPELTPFFLEAGEIVNAIPFPSI 240 LPAQSAEVSRATANAGAADGNWLGNLLEEIGILLLPIAPELTPFFLEAGEIVNAIPFPSI Sbjct 181 LPAQSAEVSRATANAGAADGNWLGNLLEEIGILLLPIAPELTPFFLEAGEIVNAIPFPSI 240 Query 241 VGDEFCLLDGLLAWYATIGSINNINSMGTGIIGAEKNLGILPELGSAAAAAAPPPADIAP 300 VGDEFCLLDGLLAWYA IGSINNINSMGTGIIGAEKNLGILPELGSAAAAAAPPPADIAP Sbjct 241 VGDEFCLLDGLLAWYAMIGSINNINSMGTGIIGAEKNLGILPELGSAAAAAAPPPADIAP 300 Query 301 AFLAPLTSMAKSLSDGALRGPGEVSAAMRGAGTIGQMSVPPAWKAPAVTTVRAFDATPMT 360 AFLAPLTSMAKSLSDGALRGPGEVSAAMRGAGTIGQMSVPPAWKAPAVTTVRAFDATPMT Sbjct 301 AFLAPLTSMAKSLSDGALRGPGEVSAAMRGAGTIGQMSVPPAWKAPAVTTVRAFDATPMT 360 Query 361 TLPGGDAPAAGVPGLPGMPASGAGRAGVVPRYGVRLTVMTRPLSGG 406 TLPGGDAPAAGVPGLPGMPASGAGRAGVVPRYGVRLTVMTRPLSGG Sbjct 361 TLPGGDAPAAGVPGLPGMPASGAGRAGVVPRYGVRLTVMTRPLSGG 406 >gi|308232493|ref|ZP_07416221.2| PPE family protein [Mycobacterium tuberculosis SUMu001] gi|308369156|ref|ZP_07416751.2| PPE family protein [Mycobacterium tuberculosis SUMu002] gi|308371381|ref|ZP_07424759.2| PPE family protein [Mycobacterium tuberculosis SUMu003] 9 more sequence titles Length=404 Score = 791 bits (2042), Expect = 0.0, Method: Compositional matrix adjust. Identities = 404/404 (100%), Positives = 404/404 (100%), Gaps = 0/404 (0%) Query 3 MDFAMLPPEVNSTRMYSGPGAGSLWAAAAAWDQVSAELQSAAETYRSVIASLTGWQWLGP 62 MDFAMLPPEVNSTRMYSGPGAGSLWAAAAAWDQVSAELQSAAETYRSVIASLTGWQWLGP Sbjct 1 MDFAMLPPEVNSTRMYSGPGAGSLWAAAAAWDQVSAELQSAAETYRSVIASLTGWQWLGP 60 Query 63 SSVRMGAAVTPYVEWLTTTAAQARQTATQITAAATGFEQAFAMTVPPPAIMANRAQVLSL 122 SSVRMGAAVTPYVEWLTTTAAQARQTATQITAAATGFEQAFAMTVPPPAIMANRAQVLSL Sbjct 61 SSVRMGAAVTPYVEWLTTTAAQARQTATQITAAATGFEQAFAMTVPPPAIMANRAQVLSL 120 Query 123 IATNFFGQNTAAIAALETQYAEMWEQDATAMYDYAATSAAARTLTPFTSPQQDTNSAGLP 182 IATNFFGQNTAAIAALETQYAEMWEQDATAMYDYAATSAAARTLTPFTSPQQDTNSAGLP Sbjct 121 IATNFFGQNTAAIAALETQYAEMWEQDATAMYDYAATSAAARTLTPFTSPQQDTNSAGLP 180 Query 183 AQSAEVSRATANAGAADGNWLGNLLEEIGILLLPIAPELTPFFLEAGEIVNAIPFPSIVG 242 AQSAEVSRATANAGAADGNWLGNLLEEIGILLLPIAPELTPFFLEAGEIVNAIPFPSIVG Sbjct 181 AQSAEVSRATANAGAADGNWLGNLLEEIGILLLPIAPELTPFFLEAGEIVNAIPFPSIVG 240 Query 243 DEFCLLDGLLAWYATIGSINNINSMGTGIIGAEKNLGILPELGSAAAAAAPPPADIAPAF 302 DEFCLLDGLLAWYATIGSINNINSMGTGIIGAEKNLGILPELGSAAAAAAPPPADIAPAF Sbjct 241 DEFCLLDGLLAWYATIGSINNINSMGTGIIGAEKNLGILPELGSAAAAAAPPPADIAPAF 300 Query 303 LAPLTSMAKSLSDGALRGPGEVSAAMRGAGTIGQMSVPPAWKAPAVTTVRAFDATPMTTL 362 LAPLTSMAKSLSDGALRGPGEVSAAMRGAGTIGQMSVPPAWKAPAVTTVRAFDATPMTTL Sbjct 301 LAPLTSMAKSLSDGALRGPGEVSAAMRGAGTIGQMSVPPAWKAPAVTTVRAFDATPMTTL 360 Query 363 PGGDAPAAGVPGLPGMPASGAGRAGVVPRYGVRLTVMTRPLSGG 406 PGGDAPAAGVPGLPGMPASGAGRAGVVPRYGVRLTVMTRPLSGG Sbjct 361 PGGDAPAAGVPGLPGMPASGAGRAGVVPRYGVRLTVMTRPLSGG 404 >gi|298527010|ref|ZP_07014419.1| ppe family protein [Mycobacterium tuberculosis 94_M4241A] gi|298496804|gb|EFI32098.1| ppe family protein [Mycobacterium tuberculosis 94_M4241A] Length=405 Score = 714 bits (1843), Expect = 0.0, Method: Compositional matrix adjust. Identities = 405/406 (99%), Positives = 405/406 (99%), Gaps = 1/406 (0%) Query 1 MFMDFAMLPPEVNSTRMYSGPGAGSLWAAAAAWDQVSAELQSAAETYRSVIASLTGWQWL 60 MFMDFAMLPPEVNSTRMYSGPGAGSLWAAAA WDQVSAELQSAAETYRSVIASLTGWQWL Sbjct 1 MFMDFAMLPPEVNSTRMYSGPGAGSLWAAAA-WDQVSAELQSAAETYRSVIASLTGWQWL 59 Query 61 GPSSVRMGAAVTPYVEWLTTTAAQARQTATQITAAATGFEQAFAMTVPPPAIMANRAQVL 120 GPSSVRMGAAVTPYVEWLTTTAAQARQTATQITAAATGFEQAFAMTVPPPAIMANRAQVL Sbjct 60 GPSSVRMGAAVTPYVEWLTTTAAQARQTATQITAAATGFEQAFAMTVPPPAIMANRAQVL 119 Query 121 SLIATNFFGQNTAAIAALETQYAEMWEQDATAMYDYAATSAAARTLTPFTSPQQDTNSAG 180 SLIATNFFGQNTAAIAALETQYAEMWEQDATAMYDYAATSAAARTLTPFTSPQQDTNSAG Sbjct 120 SLIATNFFGQNTAAIAALETQYAEMWEQDATAMYDYAATSAAARTLTPFTSPQQDTNSAG 179 Query 181 LPAQSAEVSRATANAGAADGNWLGNLLEEIGILLLPIAPELTPFFLEAGEIVNAIPFPSI 240 LPAQSAEVSRATANAGAADGNWLGNLLEEIGILLLPIAPELTPFFLEAGEIVNAIPFPSI Sbjct 180 LPAQSAEVSRATANAGAADGNWLGNLLEEIGILLLPIAPELTPFFLEAGEIVNAIPFPSI 239 Query 241 VGDEFCLLDGLLAWYATIGSINNINSMGTGIIGAEKNLGILPELGSAAAAAAPPPADIAP 300 VGDEFCLLDGLLAWYATIGSINNINSMGTGIIGAEKNLGILPELGSAAAAAAPPPADIAP Sbjct 240 VGDEFCLLDGLLAWYATIGSINNINSMGTGIIGAEKNLGILPELGSAAAAAAPPPADIAP 299 Query 301 AFLAPLTSMAKSLSDGALRGPGEVSAAMRGAGTIGQMSVPPAWKAPAVTTVRAFDATPMT 360 AFLAPLTSMAKSLSDGALRGPGEVSAAMRGAGTIGQMSVPPAWKAPAVTTVRAFDATPMT Sbjct 300 AFLAPLTSMAKSLSDGALRGPGEVSAAMRGAGTIGQMSVPPAWKAPAVTTVRAFDATPMT 359 Query 361 TLPGGDAPAAGVPGLPGMPASGAGRAGVVPRYGVRLTVMTRPLSGG 406 TLPGGDAPAAGVPGLPGMPASGAGRAGVVPRYGVRLTVMTRPLSGG Sbjct 360 TLPGGDAPAAGVPGLPGMPASGAGRAGVVPRYGVRLTVMTRPLSGG 405 >gi|289755661|ref|ZP_06515039.1| PPE family protein [Mycobacterium tuberculosis EAS054] gi|289696248|gb|EFD63677.1| PPE family protein [Mycobacterium tuberculosis EAS054] Length=405 Score = 712 bits (1838), Expect = 0.0, Method: Compositional matrix adjust. Identities = 404/406 (99%), Positives = 404/406 (99%), Gaps = 1/406 (0%) Query 1 MFMDFAMLPPEVNSTRMYSGPGAGSLWAAAAAWDQVSAELQSAAETYRSVIASLTGWQWL 60 MFMDFAMLPPEVNSTRMYSGPGAGSLWAAAA WDQVSAELQSAAETYRSVIASLTGWQWL Sbjct 1 MFMDFAMLPPEVNSTRMYSGPGAGSLWAAAA-WDQVSAELQSAAETYRSVIASLTGWQWL 59 Query 61 GPSSVRMGAAVTPYVEWLTTTAAQARQTATQITAAATGFEQAFAMTVPPPAIMANRAQVL 120 GPSSVRMGAAVTPYVEWLTTTAAQARQTATQITAAATGFEQAFAMTVPPPAIMANRAQVL Sbjct 60 GPSSVRMGAAVTPYVEWLTTTAAQARQTATQITAAATGFEQAFAMTVPPPAIMANRAQVL 119 Query 121 SLIATNFFGQNTAAIAALETQYAEMWEQDATAMYDYAATSAAARTLTPFTSPQQDTNSAG 180 SLIATNFFGQNTAAIAALETQYAEMWEQDATAMYDYAATSAAARTLTPFTSPQQDTNSAG Sbjct 120 SLIATNFFGQNTAAIAALETQYAEMWEQDATAMYDYAATSAAARTLTPFTSPQQDTNSAG 179 Query 181 LPAQSAEVSRATANAGAADGNWLGNLLEEIGILLLPIAPELTPFFLEAGEIVNAIPFPSI 240 LPAQSAEVSRATANAGAADGNWLGNLLEEIGILLLPIAPELTPFFLEAGEIVNAIPFPSI Sbjct 180 LPAQSAEVSRATANAGAADGNWLGNLLEEIGILLLPIAPELTPFFLEAGEIVNAIPFPSI 239 Query 241 VGDEFCLLDGLLAWYATIGSINNINSMGTGIIGAEKNLGILPELGSAAAAAAPPPADIAP 300 VGDEFCLLDGLLAWYA IGSINNINSMGTGIIGAEKNLGILPELGSAAAAAAPPPADIAP Sbjct 240 VGDEFCLLDGLLAWYAMIGSINNINSMGTGIIGAEKNLGILPELGSAAAAAAPPPADIAP 299 Query 301 AFLAPLTSMAKSLSDGALRGPGEVSAAMRGAGTIGQMSVPPAWKAPAVTTVRAFDATPMT 360 AFLAPLTSMAKSLSDGALRGPGEVSAAMRGAGTIGQMSVPPAWKAPAVTTVRAFDATPMT Sbjct 300 AFLAPLTSMAKSLSDGALRGPGEVSAAMRGAGTIGQMSVPPAWKAPAVTTVRAFDATPMT 359 Query 361 TLPGGDAPAAGVPGLPGMPASGAGRAGVVPRYGVRLTVMTRPLSGG 406 TLPGGDAPAAGVPGLPGMPASGAGRAGVVPRYGVRLTVMTRPLSGG Sbjct 360 TLPGGDAPAAGVPGLPGMPASGAGRAGVVPRYGVRLTVMTRPLSGG 405 >gi|289445124|ref|ZP_06434868.1| PPE family protein [Mycobacterium tuberculosis CPHL_A] gi|289418082|gb|EFD15283.1| PPE family protein [Mycobacterium tuberculosis CPHL_A] Length=285 Score = 529 bits (1362), Expect = 4e-148, Method: Compositional matrix adjust. Identities = 266/267 (99%), Positives = 267/267 (100%), Gaps = 0/267 (0%) Query 1 MFMDFAMLPPEVNSTRMYSGPGAGSLWAAAAAWDQVSAELQSAAETYRSVIASLTGWQWL 60 MFMDFAMLPPEVNSTRMYSGPGAGSLWAAAAAWDQVSAELQSAAETYRSVIASLTGWQWL Sbjct 1 MFMDFAMLPPEVNSTRMYSGPGAGSLWAAAAAWDQVSAELQSAAETYRSVIASLTGWQWL 60 Query 61 GPSSVRMGAAVTPYVEWLTTTAAQARQTATQITAAATGFEQAFAMTVPPPAIMANRAQVL 120 GPSSVRMGAAVTPYVEWLTTTAAQARQTATQITAAATGFEQAFAMTVPPPAIMANRAQVL Sbjct 61 GPSSVRMGAAVTPYVEWLTTTAAQARQTATQITAAATGFEQAFAMTVPPPAIMANRAQVL 120 Query 121 SLIATNFFGQNTAAIAALETQYAEMWEQDATAMYDYAATSAAARTLTPFTSPQQDTNSAG 180 SLIATNFFGQNTAAIAALETQYAEMWEQDATAMYDYAATSAAARTLTPFTSPQQDTNSAG Sbjct 121 SLIATNFFGQNTAAIAALETQYAEMWEQDATAMYDYAATSAAARTLTPFTSPQQDTNSAG 180 Query 181 LPAQSAEVSRATANAGAADGNWLGNLLEEIGILLLPIAPELTPFFLEAGEIVNAIPFPSI 240 LPAQSAEVSRATANAGAADGNWLGNLLEEIGILLLPIAPELTPFFLEAGEIVNAIPFPSI Sbjct 181 LPAQSAEVSRATANAGAADGNWLGNLLEEIGILLLPIAPELTPFFLEAGEIVNAIPFPSI 240 Query 241 VGDEFCLLDGLLAWYATIGSINNINSM 267 VGDEFCLLDGLLAWYATIGSINNINS+ Sbjct 241 VGDEFCLLDGLLAWYATIGSINNINSI 267 >gi|323717805|gb|EGB27002.1| hypothetical protein TMMG_00021 [Mycobacterium tuberculosis CDC1551A] Length=262 Score = 514 bits (1323), Expect = 1e-143, Method: Compositional matrix adjust. Identities = 262/262 (100%), Positives = 262/262 (100%), Gaps = 0/262 (0%) Query 145 MWEQDATAMYDYAATSAAARTLTPFTSPQQDTNSAGLPAQSAEVSRATANAGAADGNWLG 204 MWEQDATAMYDYAATSAAARTLTPFTSPQQDTNSAGLPAQSAEVSRATANAGAADGNWLG Sbjct 1 MWEQDATAMYDYAATSAAARTLTPFTSPQQDTNSAGLPAQSAEVSRATANAGAADGNWLG 60 Query 205 NLLEEIGILLLPIAPELTPFFLEAGEIVNAIPFPSIVGDEFCLLDGLLAWYATIGSINNI 264 NLLEEIGILLLPIAPELTPFFLEAGEIVNAIPFPSIVGDEFCLLDGLLAWYATIGSINNI Sbjct 61 NLLEEIGILLLPIAPELTPFFLEAGEIVNAIPFPSIVGDEFCLLDGLLAWYATIGSINNI 120 Query 265 NSMGTGIIGAEKNLGILPELGSAAAAAAPPPADIAPAFLAPLTSMAKSLSDGALRGPGEV 324 NSMGTGIIGAEKNLGILPELGSAAAAAAPPPADIAPAFLAPLTSMAKSLSDGALRGPGEV Sbjct 121 NSMGTGIIGAEKNLGILPELGSAAAAAAPPPADIAPAFLAPLTSMAKSLSDGALRGPGEV 180 Query 325 SAAMRGAGTIGQMSVPPAWKAPAVTTVRAFDATPMTTLPGGDAPAAGVPGLPGMPASGAG 384 SAAMRGAGTIGQMSVPPAWKAPAVTTVRAFDATPMTTLPGGDAPAAGVPGLPGMPASGAG Sbjct 181 SAAMRGAGTIGQMSVPPAWKAPAVTTVRAFDATPMTTLPGGDAPAAGVPGLPGMPASGAG 240 Query 385 RAGVVPRYGVRLTVMTRPLSGG 406 RAGVVPRYGVRLTVMTRPLSGG Sbjct 241 RAGVVPRYGVRLTVMTRPLSGG 262 >gi|240173322|ref|ZP_04751980.1| PPE family protein [Mycobacterium kansasii ATCC 12478] Length=402 Score = 452 bits (1163), Expect = 5e-125, Method: Compositional matrix adjust. Identities = 264/409 (65%), Positives = 312/409 (77%), Gaps = 10/409 (2%) Query 1 MFMDFAMLPPEVNSTRMYSGPGAGSLWAAAAAWDQVSAELQSAAETYRSVIASLTGWQWL 60 MF DFA LPPEV STRMYSGPG+GSL AAA W Q+SAEL ++A+TYRSV++ L W W+ Sbjct 1 MFTDFAFLPPEVISTRMYSGPGSGSLQAAAEGWQQLSAELHASAQTYRSVVSDLIAWHWV 60 Query 61 GPSSVRMGAAVTPYVEWLTTTAAQARQTATQITAAATGFEQAFAMTVPPPAIMANRAQVL 120 GPSS M AA T Y EWL TA Q QTA Q AA+ F++AFAMTVPP + ANR Q+L Sbjct 61 GPSSAAMAAAATSYAEWLEATAIQTGQTARQAATAASAFDEAFAMTVPPSIVFANREQLL 120 Query 121 SLIATNFFGQNTAAIAALETQYAEMWEQDATAMYDYAATSAAARTLTPFTSPQQDTNSAG 180 LIATNFFGQNT+AIAALE YAEMW +++ M DY+ TSAAA LTPF SPQQ TN AG Sbjct 121 LLIATNFFGQNTSAIAALELAYAEMWVTNSSVMQDYSVTSAAATKLTPFASPQQATNPAG 180 Query 181 LPAQSAEVSRATANAGAADGNWLGNLLEEIGILLLPIAPELTPFFLEAGEIVNAIPFPSI 240 LP Q+A V++ATA A A GNWLGNLLE+IG+ LLP APELTPFFLEAGE++NAIPFPSI Sbjct 181 LPGQAAAVAQATAGAAADGGNWLGNLLEQIGMALLPFAPELTPFFLEAGELINAIPFPSI 240 Query 241 VGDEFCLLDGLLAWYATIGSINNINSMGTGIIGAEKNLGILPELGSAAAAAAPPPADIAP 300 V D+F LDG++AWYAT+ SINNI+S+GTGIIGAEKNLGILP L A P A++ P Sbjct 241 VADDFTFLDGVMAWYATVSSINNISSLGTGIIGAEKNLGILPSL-------AAPAAEVVP 293 Query 301 AFLAPLTSMAKSLSDGALR---GPGEVSAAMRGAGTIGQMSVPPAWKAPAVTTVRAFDAT 357 + LAPL + K+++D + G GEV+AA RGAG+IG MSVPP W APAVTTV+ F T Sbjct 294 SELAPLVNSVKNVADAVAKGGPGIGEVTAAFRGAGSIGPMSVPPTWTAPAVTTVKTFQGT 353 Query 358 PMTTLPGGDAPAAGVPGLPGMPASGAGRAGVVPRYGVRLTVMTRPLSGG 406 P+TTLP GDA AG+PG+PG+ +G R GVVPRYG+ VMTRPLSGG Sbjct 354 PLTTLPAGDAGGAGMPGMPGIAPAGTRRGGVVPRYGLTPRVMTRPLSGG 402 >gi|183983433|ref|YP_001851724.1| PPE family protein, PPE61 [Mycobacterium marinum M] gi|183176759|gb|ACC41869.1| PPE family protein, PPE61 [Mycobacterium marinum M] Length=391 Score = 429 bits (1104), Expect = 3e-118, Method: Compositional matrix adjust. Identities = 246/406 (61%), Positives = 294/406 (73%), Gaps = 17/406 (4%) Query 3 MDFAMLPPEVNSTRMYSGPGAGSLWAAAAAWDQVSAELQSAAETYRSVIASLTGWQWLGP 62 M F MLPPE+NSTRMY+GPG+ SL AA+A+W+ VS L SAAE+YR++IA LT +QWLGP Sbjct 1 MSFMMLPPEINSTRMYTGPGSASLRAASASWNSVSVGLHSAAESYRAMIADLTSFQWLGP 60 Query 63 SSVRMGAAVTPYVEWLTTTAAQARQTATQITAAATGFEQAFAMTVPPPAIMANRAQVLSL 122 SS M A+V PYV WL TA QA +A Q +AAA +EQAFAMTVPPPAI NRA++ +L Sbjct 61 SSAAMIASVLPYVGWLEATAVQAGHSAMQASAAAAAYEQAFAMTVPPPAIAVNRAELAAL 120 Query 123 IATNFFGQNTAAIAALETQYAEMWEQDATAMYDYAATSAAARTLTPFTSPQQDTNSAGLP 182 IATNFFGQNTAAIAA E +YAEMW DATAM Y++TSAAAR LTPFTSPQQ TN AGL Sbjct 121 IATNFFGQNTAAIAANEAEYAEMWATDATAMTSYSSTSAAARALTPFTSPQQTTNPAGLG 180 Query 183 AQSAEVSRATANAGAADGNWLGNLLEEIGILLLPIAPELTPFFLEAGEIVNAIPFPSIVG 242 AQSA V+ +TAN A GNWLGNL++ IG+ LLPIAPEL+ + GE++N IPFPS Sbjct 181 AQSAAVANSTANVAADSGNWLGNLIDAIGVALLPIAPELSAILIPLGELINMIPFPSFFA 240 Query 243 DEFCLLDGLLAWYATIGSINNINSMGTGIIGAEKNLGILPELGSAAAAAAPPPADIA--P 300 D+F +LDGLLA+YATIGSI NI SMG+GIIG E LG++P +A AAA A + P Sbjct 241 DDFTILDGLLAFYATIGSIKNIQSMGSGIIGTENTLGLIPHAAAATAAAPNALAALGGEP 300 Query 301 AFLAPLTSMAKSLSDGALRGPGEVSAAMRGAGTIGQMSVPPAWKAPAVTTVRAFDATPMT 360 A A L +A L+ G IGQMSVPP+W P VTT++A ATP+T Sbjct 301 ALGAELGPIAAELTSG---------------NRIGQMSVPPSWTEPKVTTIKALQATPLT 345 Query 361 TLPGGDAPAAGVPGLPGMPASGAGRAGVVPRYGVRLTVMTRPLSGG 406 TLP + PA+G+PG+PGM +G GR GV PRYGVRLTVM RP SGG Sbjct 346 TLPTDEVPASGIPGIPGMAMTGTGRGGVTPRYGVRLTVMPRPFSGG 391 >gi|183983432|ref|YP_001851723.1| PPE family protein, PPE61_1 [Mycobacterium marinum M] gi|183176758|gb|ACC41868.1| PPE family protein, PPE61_1 [Mycobacterium marinum M] Length=391 Score = 426 bits (1096), Expect = 3e-117, Method: Compositional matrix adjust. Identities = 242/404 (60%), Positives = 294/404 (73%), Gaps = 13/404 (3%) Query 3 MDFAMLPPEVNSTRMYSGPGAGSLWAAAAAWDQVSAELQSAAETYRSVIASLTGWQWLGP 62 M F MLPPE+NSTRMYSGPG+ SL AA+A+W+ VS L SAAE+YR++IA LT +QWLGP Sbjct 1 MSFMMLPPEINSTRMYSGPGSASLRAASASWNSVSVGLHSAAESYRAMIADLTSFQWLGP 60 Query 63 SSVRMGAAVTPYVEWLTTTAAQARQTATQITAAATGFEQAFAMTVPPPAIMANRAQVLSL 122 SS M A+V PYV WL TA QA +A Q +AAA +EQAFAMTVPPPAI NRA++ +L Sbjct 61 SSAAMVASVLPYVGWLEATAVQAGHSAMQASAAAAAYEQAFAMTVPPPAIAVNRAELAAL 120 Query 123 IATNFFGQNTAAIAALETQYAEMWEQDATAMYDYAATSAAARTLTPFTSPQQDTNSAGLP 182 IATNFFGQNTAAIAA E +YAEMW DATAM Y++TSAAAR LTPFTSP Q TN AGL Sbjct 121 IATNFFGQNTAAIAANEAEYAEMWATDATAMTSYSSTSAAARALTPFTSPHQTTNPAGLG 180 Query 183 AQSAEVSRATANAGAADGNWLGNLLEEIGILLLPIAPELTPFFLEAGEIVNAIPFPSIVG 242 AQSA V+ +TAN A GNWLGNL++ IG+ LLPIAPEL+ + GE++N IPFPS + Sbjct 181 AQSAAVANSTANVAADSGNWLGNLIDAIGVALLPIAPELSAILIPLGELINMIPFPSFLA 240 Query 243 DEFCLLDGLLAWYATIGSINNINSMGTGIIGAEKNLGILPELGSAAAAAAPPPADIAPAF 302 D+F +LDGLLA+YATIGS+ NI SM +GIIG + LG++P +AAA A Sbjct 241 DDFTILDGLLAFYATIGSMQNIQSMASGIIGTDDTLGLIPHAAAAAADAP---------- 290 Query 303 LAPLTSMAKSLSDGALRGPGEVSAAMRGAGTIGQMSVPPAWKAPAVTTVRAFDATPMTTL 362 L ++ GA GP ++A + IGQMSVPP+W P VTT++A ATP+TTL Sbjct 291 -NALAALGGEPGLGAELGP--IAAELTSGNRIGQMSVPPSWTEPKVTTIKALQATPLTTL 347 Query 363 PGGDAPAAGVPGLPGMPASGAGRAGVVPRYGVRLTVMTRPLSGG 406 P + PA+G+PG+PGM +G GR GV PRYGVRLTVMTRP SGG Sbjct 348 PTDEVPASGIPGMPGMAMTGTGRGGVAPRYGVRLTVMTRPFSGG 391 >gi|240169296|ref|ZP_04747955.1| PPE family protein [Mycobacterium kansasii ATCC 12478] Length=409 Score = 412 bits (1060), Expect = 4e-113, Method: Compositional matrix adjust. Identities = 240/413 (59%), Positives = 286/413 (70%), Gaps = 11/413 (2%) Query 1 MFMDFAMLPPEVNSTRMYSGPGAGSLWAAAAAWDQVSAELQSAAETYRSVIASLTGWQWL 60 MF DFA+LPPEVNS RMY+GPG+ SL AAA+W ++ EL SAA YRSV+ LT QW Sbjct 1 MF-DFALLPPEVNSARMYTGPGSASLRTAAASWQLLAVELHSAASMYRSVVMDLTSMQWT 59 Query 61 GPSSVRMGAAVTPYVEWLTTTAAQARQTATQITAAATGFEQAFAMTVPPPAIMANRAQVL 120 G SS+ M AAV PYV+WLT TA QA TA Q TAAAT FEQAFAMTVPPP I ANRA++L Sbjct 60 GSSSMSMAAAVIPYVDWLTVTAEQAGHTAAQATAAATAFEQAFAMTVPPPLIAANRAELL 119 Query 121 SLIATNFFGQNTAAIAALETQYAEMWEQDATAMYDYAATSAAARTLTPFTSPQQDTNSAG 180 +LIATNFFGQNTAAIA E QY +MW QDATAM DY SAAA LTPF SPQ DTN AG Sbjct 120 ALIATNFFGQNTAAIATTEAQYMQMWAQDATAMDDYTVASAAAWKLTPFASPQPDTNPAG 179 Query 181 LPAQSAEVSRATANAGAADGNWLGNLLEEIGILLLPIA-PELTPFFLEAGEIVNAIPFPS 239 AQ A V+RA A GNW+GNLL++IG L + PE+ GE VN + P Sbjct 180 RSAQHAAVTRAITKAPDNKGNWIGNLLKDIGAALTAVGLPEVGVPLYALGEFVNTLKLPK 239 Query 240 IVGDEFCLLDGLLAWYATIGSINNINSMGTGIIGAEKNLGILPELGSAAAAAAPPPADIA 299 I+ D+F LD L AWY+T+GS+ ++ M GII EK+LG++ + A P +A Sbjct 240 ILKDDFTALDALFAWYSTMGSVTGVSGMTNGIINTEKSLGLISGVTQPVAETVP---KVA 296 Query 300 PAFLAPLTSMAKSLSDGALRG----PGEVSAAMRGAGTIGQMSVPPAWKAP-AVTTVRAF 354 PA LAPL S+AKSLS +R G+VSAA R AG+IGQ+SVPP+W P A + F Sbjct 297 PALLAPLNSIAKSLSGATMRAGGVLGGQVSAAARSAGSIGQLSVPPSWATPQAAVAAKTF 356 Query 355 D-ATPMTTLPGGDAPAAGVPGLPGMPASGAGRAGVVPRYGVRLTVMTRPLSGG 406 ATP+TTLP DA A +PGLPGMP++ GRAGVVPRYG+R+TVM+RPLSGG Sbjct 357 QAATPLTTLPTSDAAPAAMPGLPGMPSAATGRAGVVPRYGLRMTVMSRPLSGG 409 >gi|118618170|ref|YP_906502.1| PPE family protein [Mycobacterium ulcerans Agy99] gi|118570280|gb|ABL05031.1| PPE family protein [Mycobacterium ulcerans Agy99] Length=377 Score = 399 bits (1024), Expect = 6e-109, Method: Compositional matrix adjust. Identities = 227/390 (59%), Positives = 282/390 (73%), Gaps = 13/390 (3%) Query 17 MYSGPGAGSLWAAAAAWDQVSAELQSAAETYRSVIASLTGWQWLGPSSVRMGAAVTPYVE 76 MY+GPG+ SL AA+A+W+ VS L SAAE+YR++IA LT +QWLGPSS M A+V PYV Sbjct 1 MYTGPGSASLRAASASWNGVSVGLHSAAESYRAMIADLTSFQWLGPSSAAMVASVLPYVG 60 Query 77 WLTTTAAQARQTATQITAAATGFEQAFAMTVPPPAIMANRAQVLSLIATNFFGQNTAAIA 136 WL TA QA +A Q +AAA +EQAFAMTVPPPAI NRA++ +LIAT+FFGQNTAAIA Sbjct 61 WLEATAVQAGHSAMQASAAAAAYEQAFAMTVPPPAIAVNRAELAALIATDFFGQNTAAIA 120 Query 137 ALETQYAEMWEQDATAMYDYAATSAAARTLTPFTSPQQDTNSAGLPAQSAEVSRATANAG 196 A E +YAEMW DATAM Y++TSAAAR LTPF+SP Q TN AGL AQSA V+ +TAN Sbjct 121 ANEAEYAEMWATDATAMTSYSSTSAAARALTPFSSPHQTTNPAGLGAQSAAVAHSTANVA 180 Query 197 AADGNWLGNLLEEIGILLLPIAPELTPFFLEAGEIVNAIPFPSIVGDEFCLLDGLLAWYA 256 A GNWLGNL++ IG+ LLPIAPEL+ + GE++N IPFPS + D+F +LDGLLA+YA Sbjct 181 ADSGNWLGNLIDAIGVALLPIAPELSAILIPLGELINMIPFPSFLADDFTVLDGLLAFYA 240 Query 257 TIGSINNINSMGTGIIGAEKNLGILPELGSAAAAAAPPPADIAPAFLAPLTSMAKSLSDG 316 TIGS+ NI SMG+GIIG + LG++P +A A A L ++ + G Sbjct 241 TIGSMQNIQSMGSGIIGTDDTLGLIPHAAAATADAP-----------NALAALGGEPALG 289 Query 317 ALRGPGEVSAAMRGAGTIGQMSVPPAWKAPAVTTVRAFDATPMTTLPGGDAPAAGVPGLP 376 A GP ++A + IGQMSVPP+W P VTT++A ATP+TTLP + PA+G+PG+P Sbjct 290 AELGP--IAAELTSGNRIGQMSVPPSWTDPKVTTIKALQATPLTTLPTDEVPASGIPGMP 347 Query 377 GMPASGAGRAGVVPRYGVRLTVMTRPLSGG 406 GM +G GR GV PRYGVRLTVM RP SGG Sbjct 348 GMAMTGTGRGGVAPRYGVRLTVMPRPFSGG 377 >gi|183980225|ref|YP_001848516.1| PPE family protein, PPE51_2 [Mycobacterium marinum M] gi|183173551|gb|ACC38661.1| PPE family protein, PPE51_2 [Mycobacterium marinum M] Length=381 Score = 366 bits (940), Expect = 3e-99, Method: Compositional matrix adjust. Identities = 213/406 (53%), Positives = 271/406 (67%), Gaps = 27/406 (6%) Query 3 MDFAMLPPEVNSTRMYSGPGAGSLWAAAAAWDQVSAELQSAAETYRSVIASLTGWQWLGP 62 MDFAMLPPEVNS MY+GPGAGSL AAA +WD+++ EL + A+TY SV++ LT W GP Sbjct 1 MDFAMLPPEVNSGLMYTGPGAGSLLAAANSWDELAIELGTTAQTYESVLSGLTSMYWAGP 60 Query 63 SSVRMGAAVTPYVEWLTTTAAQARQTATQITAAATGFEQAFAMTVPPPAIMANRAQVLSL 122 +S M A PYV WL +TA Q +QTATQ AAA FEQA+AMTVPPP I+ANR Q++SL Sbjct 61 ASESMAAKAAPYVWWLHSTAEQTQQTATQCRAAAMAFEQAYAMTVPPPVILANRMQLMSL 120 Query 123 IATNFFGQNTAAIAALETQYAEMWEQDATAMYDYAATSAAARTLTPFTSPQQDTNSAGLP 182 +ATNFFGQNTAAIAALE QYAEMWEQDA AMY YA ++A A L PF+SPQQ TN AGL Sbjct 121 VATNFFGQNTAAIAALEAQYAEMWEQDAAAMYGYATSAAMAAQLVPFSSPQQTTNPAGLS 180 Query 183 AQSAEVSRATANAGAADGNWLGNLLEEIGILLLPIAPELTPFFLEAGEIVNAIPFPSIVG 242 AQSA V++A A A AA N L +L+ ++ G A FP+++ Sbjct 181 AQSAAVNQADATAAAA--NPLSDLIA----------------LVQKGLAALAGAFPNLLP 222 Query 243 DEFCLLDGLLAWYATIGSINNINSMGTGIIGAEKNLGILPELGSAAAAAAPPPADIAPAF 302 D+F +LDG+ A YAT+G + S+ GIIGAE NLG+L AA+ PA++AP Sbjct 223 DDFSILDGIFAGYATVGVSQDCESIIAGIIGAESNLGML-------GAASENPAELAPGD 275 Query 303 LAPLTSMAKSLS-DGALRGPGEVSAAMRGAGTIGQMSVPPAWKAPAVTTVRAFDATPMTT 361 + + ++ + S GA+ GPG V ++ AG+IGQ+SVP +W APA V A + +TT Sbjct 276 IGIGSVLSSAPSVGGAVSGPGAVLVSVGRAGSIGQLSVPASWAAPATRQVAALSSAGLTT 335 Query 362 LPGGDAPAAGVPGLPGMPASGAGRA-GVVPRYGVRLTVMTRPLSGG 406 +PG + A G+PG+PGMP + RA VVPRYGVRLTVM P + G Sbjct 336 IPGTEEAAHGIPGMPGMPVGSSSRASSVVPRYGVRLTVMAHPPAAG 381 >gi|240168615|ref|ZP_04747274.1| PPE family protein [Mycobacterium kansasii ATCC 12478] Length=379 Score = 316 bits (809), Expect = 5e-84, Method: Compositional matrix adjust. Identities = 203/411 (50%), Positives = 258/411 (63%), Gaps = 39/411 (9%) Query 3 MDFAMLPPEVNSTRMYSGPGAGSLWAAAAAWDQVSAELQSAAETYRSVIASLTGWQWLGP 62 MD+A LPPE+NS R+YSGPG GSL AAA WD V+ EL SAA YRSVI+SLT W GP Sbjct 1 MDYAFLPPEINSARIYSGPGPGSLLAAARGWDAVATELTSAAVGYRSVISSLTAMYWWGP 60 Query 63 SSVRMGAAVTPYVEWLTTTAAQARQTATQITAAATGFEQAFAMTVPPPAIMANRAQVLSL 122 +SV M A P+VEWL TTAAQA+++A Q AAA FEQA AMTVPP + ANR Q+ +L Sbjct 61 ASVSMLATAGPFVEWLETTAAQAKESADQSRAAAAAFEQAHAMTVPPAVVAANRTQLKAL 120 Query 123 IATNFFGQNTAAIAALETQYAEMWEQDATAMYDYAATSAAARTLTPFTSPQQDTNSAGLP 182 IA+NFFGQNTAAIAA E QYAEMW QDA AMY YA+ SAAA LTPF+SP+ + G Sbjct 121 IASNFFGQNTAAIAATEAQYAEMWAQDAAAMYGYASNSAAATALTPFSSPELSVDPDG-- 178 Query 183 AQSAEVSRATANAGAADGN------WLGNLLEEIGILLLPIAPELTPFFLEAGEIVNAIP 236 + + + A G + GN WL +L APE L+A + Sbjct 179 VVAQSAAVSQAAGGGSAGNTATVLSWLASL-----------APEA----LQAVQ-----D 218 Query 237 FPSIVGDEFCLLDGLLAWYATIGSINNINSMGTGIIGAEKNLGILPELGSAAAAAAPPPA 296 +P+I+ D+F +LD + A YAT+G ++ S GIIGAE NLG+ PA Sbjct 219 WPNILPDDFTILDAIFAVYATVGVSQDVESFAAGIIGAEDNLGLF--------GTTENPA 270 Query 297 DIAPAFLAPLTSMAKSLSDGALRGPGEVSAAMRGAGTIGQMSVPPAWKAPAVTTVRAFDA 356 ++ PA L+P+ S A+S + L V+A+M AG+IG +SVP +W AP+ V A Sbjct 271 ELLPAGLSPVFSAAESSTGAGLS--SVVTASMSRAGSIGPLSVPASWTAPSTGPVTALSG 328 Query 357 TPMTTLPGGDAPAAGVPGLPGMPASGAGRA-GVVPRYGVRLTVMTRPLSGG 406 + +TT+PG + P G+PG+PGMPA RA VVPRYGVRLTVM+RP + G Sbjct 329 SGLTTIPGTEVPDHGLPGVPGMPAGTLKRASSVVPRYGVRLTVMSRPPAAG 379 >gi|31794311|ref|NP_856804.1| PPE family protein [Mycobacterium bovis AF2122/97] gi|31619907|emb|CAD95251.1| PPE FAMILY PROTEIN [Mycobacterium bovis AF2122/97] gi|341603057|emb|CCC65735.1| PPE family protein [Mycobacterium bovis BCG str. Moreau RDJ] Length=381 Score = 309 bits (791), Expect = 6e-82, Method: Compositional matrix adjust. Identities = 217/412 (53%), Positives = 263/412 (64%), Gaps = 39/412 (9%) Query 3 MDFAMLPPEVNSTRMYSGPGAGSLWAAAAAWDQVSAELQSAAETYRSVIASLTGWQWLGP 62 MD+A LPPE+NS RMYSGPG S+ AAA+WD ++AEL SAAE Y SVIA LTG W GP Sbjct 1 MDYAFLPPEINSARMYSGPGPNSMLVAAASWDALAAELASAAENYGSVIARLTGMHWWGP 60 Query 63 SSVRMGAAVTPYVEWLTTTAAQARQTATQITAAATGFEQAFAMTVPPPAIMANRAQVLSL 122 +S M A PYVEWL TAAQ +QTATQ AAA FEQA AMTVPP + ANRA++ +L Sbjct 61 ASTSMLAMSAPYVEWLERTAAQTKQTATQARAAAAAFEQAHAMTVPPALVTANRAELKAL 120 Query 123 IATNFFGQNTAAIAALETQYAEMWEQDATAMYDYAATSAAARTLTPFTSPQQDTNSAGLP 182 IA+N GQNTAAIAA+E QYAEMW QDA AMY YA TSAAAR LTPF+SPQQ TN AGL Sbjct 121 IASNLLGQNTAAIAAIEAQYAEMWAQDAAAMYGYATTSAAARQLTPFSSPQQTTNPAGLA 180 Query 183 AQSAEVSRATANAGAADGNWLGNLLEEIGILLLPIAPELTPFFLEAGEIVNAIPFPSIVG 242 AQ+A V++A N+ GN + +L+ F +A E +P+I+ Sbjct 181 AQNAAVTQAATNSA-------GNTPTALS--------QLSSFLSQAVEAPTG--WPNILP 223 Query 243 DEFCLLDGLLAWYATIGSINNINSMGTGIIGAEKNLGILPELGSAAAAAAPPPADIAPAF 302 D+F +LDG+LA YAT+G +I S+ GIIGAE NLG+L AA+ PA++AP Sbjct 224 DDFTILDGILAAYATVGVTQDIESICAGIIGAENNLGLL-------GAASENPAELAPGA 276 Query 303 L---APLTSMAK----SLSDGALRGPGEVSAAMRGAGTIGQMSVPPAWKAPAVTTVRAFD 355 A L+S K S+ D L G AG+IG MSVPP+W P+ T V A Sbjct 277 FGIDAALSSAEKGAAASMHDAVLASAGR-------AGSIGPMSVPPSWATPSSTPVSALS 329 Query 356 ATPMTTLPGGDAPAAGVPGLPGMPASGAGRA-GVVPRYGVRLTVMTRPLSGG 406 +TTL G D G PGLPG+PA RA GV+PRYGVRLTVM+RP + G Sbjct 330 GAGLTTLDGTDVAEHGTPGLPGVPAGTDKRASGVIPRYGVRLTVMSRPPAAG 381 >gi|121639018|ref|YP_979242.1| PPE family protein [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|121494666|emb|CAL73147.1| PPE family protein [Mycobacterium bovis BCG str. Pasteur 1173P2] Length=381 Score = 308 bits (789), Expect = 1e-81, Method: Compositional matrix adjust. Identities = 216/412 (53%), Positives = 263/412 (64%), Gaps = 39/412 (9%) Query 3 MDFAMLPPEVNSTRMYSGPGAGSLWAAAAAWDQVSAELQSAAETYRSVIASLTGWQWLGP 62 MD+A LPPE+NS RMYSGPG S+ AAA+WD ++AEL SAAE Y SVIA LTG W GP Sbjct 1 MDYAFLPPEINSARMYSGPGPNSMLVAAASWDALAAELASAAENYGSVIARLTGMHWWGP 60 Query 63 SSVRMGAAVTPYVEWLTTTAAQARQTATQITAAATGFEQAFAMTVPPPAIMANRAQVLSL 122 +S M A PYVEWL TAAQ +QTATQ AAA FEQA AMTVPP + ANRA++ +L Sbjct 61 ASTSMLAMSAPYVEWLERTAAQTKQTATQARAAAAAFEQAHAMTVPPALVTANRAELKAL 120 Query 123 IATNFFGQNTAAIAALETQYAEMWEQDATAMYDYAATSAAARTLTPFTSPQQDTNSAGLP 182 IA+N GQNTAAIAA+E QYAEMW QDA AMY YA TSAAAR LTPF+SPQQ TN AGL Sbjct 121 IASNLLGQNTAAIAAIEAQYAEMWAQDAAAMYGYATTSAAARQLTPFSSPQQTTNPAGLA 180 Query 183 AQSAEVSRATANAGAADGNWLGNLLEEIGILLLPIAPELTPFFLEAGEIVNAIPFPSIVG 242 AQ+A V++A N+ GN + +L+ F +A + +P+I+ Sbjct 181 AQNAAVTQAATNSA-------GNTPTALS--------QLSSFLSQA--VKAPTGWPNILP 223 Query 243 DEFCLLDGLLAWYATIGSINNINSMGTGIIGAEKNLGILPELGSAAAAAAPPPADIAPAF 302 D+F +LDG+LA YAT+G +I S+ GIIGAE NLG+L AA+ PA++AP Sbjct 224 DDFTILDGILAAYATVGVTQDIESICAGIIGAENNLGLL-------GAASENPAELAPGA 276 Query 303 L---APLTSMAK----SLSDGALRGPGEVSAAMRGAGTIGQMSVPPAWKAPAVTTVRAFD 355 A L+S K S+ D L G AG+IG MSVPP+W P+ T V A Sbjct 277 FGIDAALSSAEKGAAASMHDAVLASAGR-------AGSIGPMSVPPSWATPSSTPVSALS 329 Query 356 ATPMTTLPGGDAPAAGVPGLPGMPASGAGRA-GVVPRYGVRLTVMTRPLSGG 406 +TTL G D G PGLPG+PA RA GV+PRYGVRLTVM+RP + G Sbjct 330 GAGLTTLDGTDVAEHGTPGLPGVPAGTDKRASGVIPRYGVRLTVMSRPPAAG 381 >gi|340628111|ref|YP_004746563.1| ppe family protein [Mycobacterium canettii CIPT 140010059] gi|340006301|emb|CCC45480.1| ppe family protein [Mycobacterium canettii CIPT 140010059] Length=381 Score = 307 bits (787), Expect = 2e-81, Method: Compositional matrix adjust. Identities = 216/412 (53%), Positives = 262/412 (64%), Gaps = 39/412 (9%) Query 3 MDFAMLPPEVNSTRMYSGPGAGSLWAAAAAWDQVSAELQSAAETYRSVIASLTGWQWLGP 62 MD+A LPPE+NS RMYSGPG S+ AAA+WD ++AEL SAAE Y SVIA LTG W GP Sbjct 1 MDYAFLPPEINSARMYSGPGPNSMLVAAASWDALAAELASAAENYGSVIARLTGMHWWGP 60 Query 63 SSVRMGAAVTPYVEWLTTTAAQARQTATQITAAATGFEQAFAMTVPPPAIMANRAQVLSL 122 +S M A PYVEWL TAAQ +QTATQ AAA FEQA AMTVPP + ANRA++ +L Sbjct 61 ASTSMLAMSAPYVEWLERTAAQTKQTATQARAAAAAFEQAHAMTVPPALVTANRAELKAL 120 Query 123 IATNFFGQNTAAIAALETQYAEMWEQDATAMYDYAATSAAARTLTPFTSPQQDTNSAGLP 182 IA+N GQNTAAIAA+E QYAEMW QDA AMY YA TSAAAR LTPF+SPQQ TN AGL Sbjct 121 IASNLLGQNTAAIAAIEAQYAEMWAQDAAAMYGYATTSAAARQLTPFSSPQQTTNPAGLA 180 Query 183 AQSAEVSRATANAGAADGNWLGNLLEEIGILLLPIAPELTPFFLEAGEIVNAIPFPSIVG 242 AQ+A V++A N+ GN + +L+ F +A E +P+I+ Sbjct 181 AQNAAVTQAATNSA-------GNTPTALS--------QLSSFLSQAVEAPTG--WPNILP 223 Query 243 DEFCLLDGLLAWYATIGSINNINSMGTGIIGAEKNLGILPELGSAAAAAAPPPADIAPAF 302 D+F +LDG+ A YAT+G +I S+ GIIGAE NLG+L AA+ PA++AP Sbjct 224 DDFTILDGIFAAYATVGVTQDIESICAGIIGAENNLGLL-------GAASENPAELAPGA 276 Query 303 L---APLTSMAK----SLSDGALRGPGEVSAAMRGAGTIGQMSVPPAWKAPAVTTVRAFD 355 A L+S K S+ D L G AG+IG MSVPP+W P+ T V A Sbjct 277 FGIDAALSSAEKGAAASMHDAVLASAGR-------AGSIGPMSVPPSWATPSSTPVSALS 329 Query 356 ATPMTTLPGGDAPAAGVPGLPGMPASGAGRA-GVVPRYGVRLTVMTRPLSGG 406 +TTL G D G PGLPG+PA RA GV+PRYGVRLTVM+RP + G Sbjct 330 GAGLTTLDGTDVAEHGTPGLPGVPAGTDKRASGVIPRYGVRLTVMSRPPAAG 381 >gi|183981528|ref|YP_001849819.1| PPE family protein, PPE51 [Mycobacterium marinum M] gi|183174854|gb|ACC39964.1| PPE family protein, PPE51 [Mycobacterium marinum M] Length=382 Score = 306 bits (783), Expect = 5e-81, Method: Compositional matrix adjust. Identities = 209/406 (52%), Positives = 262/406 (65%), Gaps = 26/406 (6%) Query 3 MDFAMLPPEVNSTRMYSGPGAGSLWAAAAAWDQVSAELQSAAETYRSVIASLTGWQWLGP 62 MDF++LPPEVNS RMY+GPG+GSL AAAA+WD ++AEL + AET S++ LT W GP Sbjct 1 MDFSLLPPEVNSARMYTGPGSGSLLAAAASWDALAAELGTTAETCGSILTGLTDLSWRGP 60 Query 63 SSVRMGAAVTPYVEWLTTTAAQARQTATQITAAATGFEQAFAMTVPPPAIMANRAQVLSL 122 +S M A+ PYV WL TA Q +Q A Q AA FEQA+AMTVPPP + ANRAQ+L L Sbjct 61 ASESMAASAAPYVGWLYRTAEQTQQAAIQARTAALAFEQAYAMTVPPPLVAANRAQLLVL 120 Query 123 IATNFFGQNTAAIAALETQYAEMWEQDATAMYDYAATSAAARTLTPFTSPQQDTNSAGLP 182 IATNFFGQNT+AIAA E QYAEMW QDA AMY YA TSAAA LTPF+SP Q T+ AGL Sbjct 121 IATNFFGQNTSAIAANEAQYAEMWAQDAAAMYGYATTSAAAGMLTPFSSPNQATSPAGLA 180 Query 183 AQSAEVSRATANAGAADGNWLGNLLEEIGILLLPIAPELTPFFLEAGEIVNAIPFPSIVG 242 AQS V++A A A A D PI +L ++ + AI PSI+ Sbjct 181 AQSTAVTQANATAAATD----------------PIT-QLVSSLTQSLGAIQAI--PSILP 221 Query 243 DEFCLLDGLLAWYATIGSINNINSMGTGIIGAEKNLGILPELGSAAAAAAPPPADIAPAF 302 D+F +LDG+ + YAT+G +I S G+IGAE NLG+ +GS+ A P+D Sbjct 222 DDFTILDGVFSAYATVGVTQDIESFCAGVIGAENNLGL---IGSSENPAEVTPSDFGLGS 278 Query 303 LAPLTSMAKSLSDGALRGPGEVSAAMRGAGTIGQMSVPPAWKAPAVTTVRAFDATPMTTL 362 L T+ A + S G L V+A++ +G+IGQ+SVPP+W AP+ V A + +TT+ Sbjct 279 LISSTAPASAASGGGLG--SAVAASVGRSGSIGQLSVPPSWSAPSARMVSALSPSGLTTI 336 Query 363 PGG-DAPAAGVPGLPGMPASGAGRA-GVVPRYGVRLTVMTRPLSGG 406 PG +A AAG PG PGM A A RA GV+PRYGVRLTVM P + G Sbjct 337 PGTEEAAAAGSPGFPGMVAPPATRASGVLPRYGVRLTVMAHPPAAG 382 >gi|224991510|ref|YP_002646199.1| PPE family protein [Mycobacterium bovis BCG str. Tokyo 172] gi|224774625|dbj|BAH27431.1| PPE family protein [Mycobacterium bovis BCG str. Tokyo 172] Length=381 Score = 306 bits (783), Expect = 6e-81, Method: Compositional matrix adjust. Identities = 216/412 (53%), Positives = 262/412 (64%), Gaps = 39/412 (9%) Query 3 MDFAMLPPEVNSTRMYSGPGAGSLWAAAAAWDQVSAELQSAAETYRSVIASLTGWQWLGP 62 MD+A LPPE+NS RMYSGPG S+ AAA+WD ++AEL SAAE Y SVIA LTG W GP Sbjct 1 MDYAFLPPEINSARMYSGPGPNSMLVAAASWDALAAELASAAENYGSVIARLTGMHWWGP 60 Query 63 SSVRMGAAVTPYVEWLTTTAAQARQTATQITAAATGFEQAFAMTVPPPAIMANRAQVLSL 122 +S M A PYVEWL TAAQ +QTATQ AAA FEQA AMTVPP + ANRA++ +L Sbjct 61 ASTSMLAMSAPYVEWLERTAAQTKQTATQARAAAAAFEQAHAMTVPPALVTANRAELKAL 120 Query 123 IATNFFGQNTAAIAALETQYAEMWEQDATAMYDYAATSAAARTLTPFTSPQQDTNSAGLP 182 IA+N GQNTAAIAA+E QYAEMW QDA AMY YA TSAAAR LTPF+SPQQ TN AGL Sbjct 121 IASNLLGQNTAAIAAIEAQYAEMWAQDAAAMYGYATTSAAARQLTPFSSPQQTTNPAGLA 180 Query 183 AQSAEVSRATANAGAADGNWLGNLLEEIGILLLPIAPELTPFFLEAGEIVNAIPFPSIVG 242 AQ+A V++A N+ GN + +L+ F +A E +P+I+ Sbjct 181 AQNAAVTQAATNSA-------GNTPTALS--------QLSSFLSQAVEAPTG--WPNILP 223 Query 243 DEFCLLDGLLAWYATIGSINNINSMGTGIIGAEKNLGILPELGSAAAAAAPPPADIAPAF 302 D+F +LDG+LA YAT+G +I S+ GIIGA NLG+L AA+ PA++AP Sbjct 224 DDFTILDGILAAYATVGVTQDIESICAGIIGAGNNLGLL-------GAASENPAELAPGA 276 Query 303 L---APLTSMAK----SLSDGALRGPGEVSAAMRGAGTIGQMSVPPAWKAPAVTTVRAFD 355 A L+S K S+ D L G AG+IG MSVPP+W P+ T V A Sbjct 277 FGIDAALSSAEKGAAASMHDAVLASAGR-------AGSIGPMSVPPSWATPSSTPVSALS 329 Query 356 ATPMTTLPGGDAPAAGVPGLPGMPASGAGRA-GVVPRYGVRLTVMTRPLSGG 406 +TTL G D G PGLPG+PA RA GV+PRYGVRLTVM+RP + G Sbjct 330 GAGLTTLDGTDVAEHGTPGLPGVPAGTDKRASGVIPRYGVRLTVMSRPPAAG 381 >gi|118617919|ref|YP_906251.1| PPE family protein [Mycobacterium ulcerans Agy99] gi|118570029|gb|ABL04780.1| PPE family protein [Mycobacterium ulcerans Agy99] Length=382 Score = 303 bits (775), Expect = 5e-80, Method: Compositional matrix adjust. Identities = 208/406 (52%), Positives = 261/406 (65%), Gaps = 26/406 (6%) Query 3 MDFAMLPPEVNSTRMYSGPGAGSLWAAAAAWDQVSAELQSAAETYRSVIASLTGWQWLGP 62 MDF++LPPEVNS RMY+GPG+GSL AAAA+WD ++AEL + AET S++ LT W GP Sbjct 1 MDFSLLPPEVNSARMYTGPGSGSLLAAAASWDALAAELGTTAETCGSILTGLTDLSWRGP 60 Query 63 SSVRMGAAVTPYVEWLTTTAAQARQTATQITAAATGFEQAFAMTVPPPAIMANRAQVLSL 122 +S M A+ P V WL TA Q +Q A Q AA FEQA+AMTVPPP + ANRAQ+L L Sbjct 61 ASESMAASAAPCVGWLYRTAEQTQQAAIQARTAALAFEQAYAMTVPPPLVAANRAQLLVL 120 Query 123 IATNFFGQNTAAIAALETQYAEMWEQDATAMYDYAATSAAARTLTPFTSPQQDTNSAGLP 182 IATNFFGQNT+AIAA E QYAEMW QDA AMY YA TSAAA LTPF+SP Q T+ AGL Sbjct 121 IATNFFGQNTSAIAANEAQYAEMWAQDAAAMYGYATTSAAAGMLTPFSSPNQATSPAGLA 180 Query 183 AQSAEVSRATANAGAADGNWLGNLLEEIGILLLPIAPELTPFFLEAGEIVNAIPFPSIVG 242 AQS V++A A A A D PI +L ++ + AI PSI+ Sbjct 181 AQSTAVTQANATAAATD----------------PIT-QLVSSLTQSLGAIQAI--PSILP 221 Query 243 DEFCLLDGLLAWYATIGSINNINSMGTGIIGAEKNLGILPELGSAAAAAAPPPADIAPAF 302 D+F +LDG+ + YAT+G +I S G+IGAE NLG+ +GS+ A P+D Sbjct 222 DDFTILDGVFSAYATVGVTQDIESFCAGVIGAENNLGL---IGSSENPAEVTPSDFGLGS 278 Query 303 LAPLTSMAKSLSDGALRGPGEVSAAMRGAGTIGQMSVPPAWKAPAVTTVRAFDATPMTTL 362 L T+ A + S G L V+A++ +G+IGQ+SVPP+W AP+ V A + +TT+ Sbjct 279 LISSTAPASAASGGGLG--SAVAASVGRSGSIGQLSVPPSWSAPSARMVSALSPSGLTTI 336 Query 363 PGG-DAPAAGVPGLPGMPASGAGRA-GVVPRYGVRLTVMTRPLSGG 406 PG +A AAG PG PGM A A RA GV+PRYGVRLTVM P + G Sbjct 337 PGTEEAAAAGSPGFPGMVAPPATRASGVLPRYGVRLTVMAHPPAAG 382 >gi|340628112|ref|YP_004746564.1| PPE family protein [Mycobacterium canettii CIPT 140010059] gi|340006302|emb|CCC45481.1| PPE family protein [Mycobacterium canettii CIPT 140010059] Length=380 Score = 298 bits (764), Expect = 8e-79, Method: Compositional matrix adjust. Identities = 194/413 (47%), Positives = 250/413 (61%), Gaps = 42/413 (10%) Query 3 MDFAMLPPEVNSTRMYSGPGAGSLWAAAAAWDQVSAELQSAAETYRSVIASLTGWQWLGP 62 MDFA+LPPEVNS RMY+GPGAGSLWAAA WD ++AEL + AE Y SV++ L W GP Sbjct 1 MDFALLPPEVNSARMYTGPGAGSLWAAAGGWDSLAAELATTAEAYGSVLSGLAALHWRGP 60 Query 63 SSVRMGAAVTPYVEWLTTTAAQARQTATQITAAATGFEQAFAMTVPPPAIMANRAQVLSL 122 ++ M Y+ WL TTA + +QTA Q AAA FEQA+AMT+PPP + ANR Q+L+L Sbjct 61 AAESMAVTAAAYIGWLYTTAEKTQQTAIQARAAALAFEQAYAMTLPPPLVAANRIQLLAL 120 Query 123 IATNFFGQNTAAIAALETQYAEMWEQDATAMYDYAATSAAARTLTPFTSPQQDTNSAGLP 182 IATNFFGQNTAAIAA E QYAEMW QDA AMY YA SAAA LTPF+ P+Q TN AGL Sbjct 121 IATNFFGQNTAAIAATEAQYAEMWAQDAAAMYGYATASAAAALLTPFSPPRQTTNPAGLT 180 Query 183 AQSAEVSRATANAGAADGNWLGNLLEEIGILLLPIAPELTPFFLEAGEIVNAIPFPSIVG 242 AQ+A VS+AT + L L+E + + + A+ PS + Sbjct 181 AQAAAVSQAT--------DPLSLLIETV------------------TQALQALTIPSFIP 214 Query 243 DEFCLLDGLLAWYATIGSINNINSMGTGIIGAEKNLGILPELGSAAAAAAPPPADIAPAF 302 ++F LD + A YAT+G ++ S G IGAE NLG+L +G PA++ P Sbjct 215 EDFTFLDAIFAGYATVGVTQDVESFVAGTIGAESNLGLL-NVGDEN------PAEVTPGD 267 Query 303 L---------APLTSMAKSLSDGALRGPGEVSAAMRGAGTIGQMSVPPAWKAPAVTTVRA 353 +P ++ S + GA V A++ A +IGQ+SVPP+W AP+ V A Sbjct 268 FGIGELVSATSPGGGVSASGAGGAASVGNTVLASVGRANSIGQLSVPPSWAAPSTRPVSA 327 Query 354 FDATPMTTLPGGDAPAAGVPGLPGMPASGAGRAGVVPRYGVRLTVMTRPLSGG 406 +TTLPG D G+PG+PG+P + +GV+PRYGVRLTVM P + G Sbjct 328 LSPAGLTTLPGTDVAEHGMPGVPGVPVAAGRASGVLPRYGVRLTVMAHPPAAG 380 >gi|15842710|ref|NP_337747.1| PPE family protein [Mycobacterium tuberculosis CDC1551] gi|31794312|ref|NP_856805.1| PPE family protein [Mycobacterium bovis AF2122/97] gi|57117065|ref|YP_177935.1| PPE family protein [Mycobacterium tuberculosis H37Rv] 69 more sequence titles Length=380 Score = 298 bits (764), Expect = 9e-79, Method: Compositional matrix adjust. Identities = 194/413 (47%), Positives = 250/413 (61%), Gaps = 42/413 (10%) Query 3 MDFAMLPPEVNSTRMYSGPGAGSLWAAAAAWDQVSAELQSAAETYRSVIASLTGWQWLGP 62 MDFA+LPPEVNS RMY+GPGAGSL AAA WD ++AEL + AE Y SV++ L W GP Sbjct 1 MDFALLPPEVNSARMYTGPGAGSLLAAAGGWDSLAAELATTAEAYGSVLSGLAALHWRGP 60 Query 63 SSVRMGAAVTPYVEWLTTTAAQARQTATQITAAATGFEQAFAMTVPPPAIMANRAQVLSL 122 ++ M PY+ WL TTA + +QTA Q AAA FEQA+AMT+PPP + ANR Q+L+L Sbjct 61 AAESMAVTAAPYIGWLYTTAEKTQQTAIQARAAALAFEQAYAMTLPPPVVAANRIQLLAL 120 Query 123 IATNFFGQNTAAIAALETQYAEMWEQDATAMYDYAATSAAARTLTPFTSPQQDTNSAGLP 182 IATNFFGQNTAAIAA E QYAEMW QDA AMY YA SAAA LTPF+ P+Q TN AGL Sbjct 121 IATNFFGQNTAAIAATEAQYAEMWAQDAAAMYGYATASAAAALLTPFSPPRQTTNPAGLT 180 Query 183 AQSAEVSRATANAGAADGNWLGNLLEEIGILLLPIAPELTPFFLEAGEIVNAIPFPSIVG 242 AQ+A VS+AT + L L+E + + + A+ PS + Sbjct 181 AQAAAVSQAT--------DPLSLLIETV------------------TQALQALTIPSFIP 214 Query 243 DEFCLLDGLLAWYATIGSINNINSMGTGIIGAEKNLGILPELGSAAAAAAPPPADIAPAF 302 ++F LD + A YAT+G ++ S G IGAE NLG+L +G PA++ P Sbjct 215 EDFTFLDAIFAGYATVGVTQDVESFVAGTIGAESNLGLL-NVGDEN------PAEVTPGD 267 Query 303 L---------APLTSMAKSLSDGALRGPGEVSAAMRGAGTIGQMSVPPAWKAPAVTTVRA 353 +P ++ S + GA V A++ A +IGQ+SVPP+W AP+ V A Sbjct 268 FGIGELVSATSPGGGVSASGAGGAASVGNTVLASVGRANSIGQLSVPPSWAAPSTRPVSA 327 Query 354 FDATPMTTLPGGDAPAAGVPGLPGMPASGAGRAGVVPRYGVRLTVMTRPLSGG 406 +TTLPG D G+PG+PG+P + +GV+PRYGVRLTVM P + G Sbjct 328 LSPAGLTTLPGTDVAEHGMPGVPGVPVAAGRASGVLPRYGVRLTVMAHPPAAG 380 >gi|306782177|ref|ZP_07420514.1| PPE family protein [Mycobacterium tuberculosis SUMu002] gi|306790362|ref|ZP_07428684.1| PPE family protein [Mycobacterium tuberculosis SUMu004] gi|306794889|ref|ZP_07433191.1| PPE family protein [Mycobacterium tuberculosis SUMu005] gi|308325139|gb|EFP13990.1| PPE family protein [Mycobacterium tuberculosis SUMu002] gi|308333218|gb|EFP22069.1| PPE family protein [Mycobacterium tuberculosis SUMu004] gi|308336675|gb|EFP25526.1| PPE family protein [Mycobacterium tuberculosis SUMu005] Length=380 Score = 298 bits (763), Expect = 1e-78, Method: Compositional matrix adjust. Identities = 195/413 (48%), Positives = 250/413 (61%), Gaps = 42/413 (10%) Query 3 MDFAMLPPEVNSTRMYSGPGAGSLWAAAAAWDQVSAELQSAAETYRSVIASLTGWQWLGP 62 MDFA+LPPEVNS RMY+GPGAGSL AAA WD ++AEL + AE Y SV++ L W GP Sbjct 1 MDFALLPPEVNSARMYTGPGAGSLLAAAGGWDSLAAELATTAEAYGSVLSGLAALHWRGP 60 Query 63 SSVRMGAAVTPYVEWLTTTAAQARQTATQITAAATGFEQAFAMTVPPPAIMANRAQVLSL 122 ++ M PY+ WL TTA + +QTA Q AAA FEQA+AMT+PPP + ANR Q+L+L Sbjct 61 AAESMAVTAAPYIGWLYTTAEKTQQTAIQARAAALAFEQAYAMTLPPPVVAANRIQLLAL 120 Query 123 IATNFFGQNTAAIAALETQYAEMWEQDATAMYDYAATSAAARTLTPFTSPQQDTNSAGLP 182 IATNFFGQNTAAIAA E QYAEMW QDA AMY YA SAAA LTPF+ P+Q TN AGL Sbjct 121 IATNFFGQNTAAIAATEAQYAEMWAQDAAAMYGYATASAAAALLTPFSPPRQTTNPAGLT 180 Query 183 AQSAEVSRATANAGAADGNWLGNLLEEIGILLLPIAPELTPFFLEAGEIVNAIPFPSIVG 242 AQ+A VS+AT + L L+E A + + A+ PS + Sbjct 181 AQAAAVSQAT--------DPLSLLIE------------------TATQALQALTIPSFIP 214 Query 243 DEFCLLDGLLAWYATIGSINNINSMGTGIIGAEKNLGILPELGSAAAAAAPPPADIAPAF 302 ++F LD + A YAT+G ++ S G IGAE NLG+L +G PA++ P Sbjct 215 EDFTFLDAIFAGYATVGVTQDVESFVAGTIGAESNLGLL-NVGDEN------PAEVTPGD 267 Query 303 L---------APLTSMAKSLSDGALRGPGEVSAAMRGAGTIGQMSVPPAWKAPAVTTVRA 353 +P ++ S + GA V A++ A +IGQ+SVPP+W AP+ V A Sbjct 268 FGIGELVSATSPGGGVSASGAGGAASVGNTVLASVGRANSIGQLSVPPSWAAPSTRPVSA 327 Query 354 FDATPMTTLPGGDAPAAGVPGLPGMPASGAGRAGVVPRYGVRLTVMTRPLSGG 406 +TTLPG D G+PG+PG+P + +GV+PRYGVRLTVM P + G Sbjct 328 LSPAGLTTLPGTDVAEHGMPGVPGVPVAAGRASGVLPRYGVRLTVMAHPPAAG 380 >gi|183981529|ref|YP_001849820.1| PPE family protein, PPE51_1 [Mycobacterium marinum M] gi|183174855|gb|ACC39965.1| PPE family protein, PPE51_1 [Mycobacterium marinum M] Length=381 Score = 292 bits (748), Expect = 6e-77, Method: Compositional matrix adjust. Identities = 203/406 (50%), Positives = 262/406 (65%), Gaps = 27/406 (6%) Query 3 MDFAMLPPEVNSTRMYSGPGAGSLWAAAAAWDQVSAELQSAAETYRSVIASLTGWQWLGP 62 M++A LPPEVNS RMYSGPG+ SL AAAA+WD V+ EL SAAE YRSVI++L+G W GP Sbjct 1 MNYAFLPPEVNSARMYSGPGSASLLAAAASWDMVAIELASAAEGYRSVISTLSGMYWWGP 60 Query 63 SSVRMGAAVTPYVEWLTTTAAQARQTATQITAAATGFEQAFAMTVPPPAIMANRAQVLSL 122 +S M AA P+++WL T A A +TA Q AAA +EQA+AMTVPP + ANRA +++L Sbjct 61 ASAAMLAATGPFIDWLEITGALASETANQAAAAAAAYEQAYAMTVPPIVVAANRALLVAL 120 Query 123 IATNFFGQNTAAIAALETQYAEMWEQDATAMYDYAATSAAARTLTPFTSPQQDTNSAGLP 182 +A+NFFGQNTAAI A E +YAEMW QDA AMYDYAATSA A L PF++P QDTN AGL Sbjct 121 VASNFFGQNTAAIEATEAEYAEMWAQDAGAMYDYAATSAMATALVPFSAPGQDTNPAGLA 180 Query 183 AQSAEVSRATANAGAADGNWLGNLLEEIGILLLPIAPELTPFFLEAGEIVNAIPFPSIVG 242 AQSA VS+A NA A+ + + L + P+ P +P+I+ Sbjct 181 AQSAAVSQAAGNAPAS--------AQSVWSQLTSLVPDALPSLSN---------WPNILP 223 Query 243 DEFCLLDGLLAWYATIGSINNINSMGTGIIGAEKNLGILPELGSAAAAAAPPPADIAPAF 302 D+F +LDG+ A YAT+G ++ S GIIGAE NLG+L AA+ PA++ P Sbjct 224 DDFSILDGIFAMYATVGVTQDVESFCAGIIGAENNLGLL-------GAASENPAEVTPGA 276 Query 303 LAPLTSMAKSLSDGALRG-PGEVSAAMRGAGTIGQMSVPPAWKAPAVTTVRAFDATPMTT 361 L L +M S A+ G V+ +M AG+IGQ+SVPP+W AP+ + A + +TT Sbjct 277 LG-LGAMFSSAERSAVGGATNAVTVSMSRAGSIGQLSVPPSWAAPSSGSASALSVSGLTT 335 Query 362 LPGGDAPAAGVPGLPGMPASGAGRA-GVVPRYGVRLTVMTRPLSGG 406 +PG + G PG+PGMP RA V+PRYGVRLTVM RP + G Sbjct 336 IPGTEVAEQGAPGMPGMPVGTGKRATSVIPRYGVRLTVMARPPAAG 381 >gi|240168614|ref|ZP_04747273.1| PPE family protein, PPE51_2 [Mycobacterium kansasii ATCC 12478] Length=378 Score = 285 bits (729), Expect = 1e-74, Method: Compositional matrix adjust. Identities = 201/405 (50%), Positives = 256/405 (64%), Gaps = 28/405 (6%) Query 3 MDFAMLPPEVNSTRMYSGPGAGSLWAAAAAWDQVSAELQSAAETYRSVIASLTGWQWLGP 62 MDFA+LPPEVNS R+Y+GPG GSL AAA +WD ++ EL + A+TY SV++ LT W GP Sbjct 1 MDFALLPPEVNSGRIYTGPGPGSLLAAAGSWDALATELDTTAQTYESVVSGLTTLDWYGP 60 Query 63 SSVRMGAAVTPYVEWLTTTAAQARQTATQITAAATGFEQAFAMTVPPPAIMANRAQVLSL 122 +S M A V PYV WL TTA Q +QTA Q AAA F+QAFAMTVPPPAI ANR Q+++L Sbjct 61 ASESMAAKVAPYVSWLYTTATQTKQTAMQARAAAAAFDQAFAMTVPPPAIAANRIQLMAL 120 Query 123 IATNFFGQNTAAIAALETQYAEMWEQDATAMYDYAATSAAARTLTPFTSPQQDTNSAGLP 182 IATNFFGQNTAAIAA E QYAEMW QDA AMY YA +S AA L PF SP Q T+ AGL Sbjct 121 IATNFFGQNTAAIAATEAQYAEMWAQDAAAMYGYATSSTAAAQLMPFPSPSQTTDPAGLS 180 Query 183 AQSAEVSRATANAGAADGNWLGNLLEEIGILLLPIAPELTPFFLEAGEIVNAIPFPSIVG 242 AQSA V++A A+A A D PI+ +L ++ ++ + P+ + Sbjct 181 AQSAAVAQANASAAATD----------------PIS-QLVAAVSQSLGALSGLQIPNFLP 223 Query 243 DEFCLLDGLLAWYATIGSINNINSMGTGIIGAEKNLGILPELGSAAAAAAPPPADIAPAF 302 ++ +LDG+ A YAT +I+++ S+ GIIG E L +P L SA A PA Sbjct 224 ADYAVLDGIFAIYATFSAIDSVESIADGIIGDEAAL--VPALTSATEA--------MPAE 273 Query 303 LAPLTSMAKSLSDGALRGPGEVSAAMRGAGTIGQMSVPPAWKAPAVTTVRAFDATPMTTL 362 + L + + + G+ GP V A+ AG+IGQ+SVP +W APA TV A +TT+ Sbjct 274 ASTLVAAQQPVGAGSGLGPNAVLASAGRAGSIGQLSVPASWAAPATRTVSALSPAGLTTI 333 Query 363 PGGDAPAAGVPGLPGMPASGAGRA-GVVPRYGVRLTVMTRPLSGG 406 PG + AG PG+PGM RA GV+PRYGVRLTVM P + G Sbjct 334 PGTEEAGAGAPGVPGMAVPAQSRASGVLPRYGVRLTVMAHPPAAG 378 >gi|118618187|ref|YP_906519.1| PPE family protein [Mycobacterium ulcerans Agy99] gi|118570297|gb|ABL05048.1| PPE family protein [Mycobacterium ulcerans Agy99] Length=381 Score = 282 bits (721), Expect = 8e-74, Method: Compositional matrix adjust. Identities = 200/406 (50%), Positives = 258/406 (64%), Gaps = 27/406 (6%) Query 3 MDFAMLPPEVNSTRMYSGPGAGSLWAAAAAWDQVSAELQSAAETYRSVIASLTGWQWLGP 62 M++A LPPEVNS RMYSGPG+ SL AAAA+WD V+ EL SAAE YRSVI++L+G W GP Sbjct 1 MNYAFLPPEVNSARMYSGPGSASLLAAAASWDMVAIELASAAEGYRSVISTLSGMYWWGP 60 Query 63 SSVRMGAAVTPYVEWLTTTAAQARQTATQITAAATGFEQAFAMTVPPPAIMANRAQVLSL 122 +S M AA P++ WL T A A +TA Q AAA +EQA+AMTVPP + ANRA +++L Sbjct 61 ASAAMLAATGPFIGWLEITGALASETANQAAAAAAAYEQAYAMTVPPIVVAANRALLVAL 120 Query 123 IATNFFGQNTAAIAALETQYAEMWEQDATAMYDYAATSAAARTLTPFTSPQQDTNSAGLP 182 +A+N FGQNTAAI A E +YAEMW QDA AMYDYAATSA A L PF++P QDTN AGL Sbjct 121 VASNIFGQNTAAIEATEAEYAEMWAQDAGAMYDYAATSAMATALVPFSAPGQDTNPAGLA 180 Query 183 AQSAEVSRATANAGAADGNWLGNLLEEIGILLLPIAPELTPFFLEAGEIVNAIPFPSIVG 242 AQSA VS+A NA A+ + + L + P+ P +P+I+ Sbjct 181 AQSAAVSQAAGNAPASA--------QSVWSQLTSLVPDALPSLSN---------WPNILP 223 Query 243 DEFCLLDGLLAWYATIGSINNINSMGTGIIGAEKNLGILPELGSAAAAAAPPPADIAPAF 302 D+F +LDG+ A YAT+G ++ S GIIGA NLG+L AA+ A++ P Sbjct 224 DDFSMLDGIFAMYATVGVTQDVESFCAGIIGAGNNLGLL-------GAASENSAEVTPGA 276 Query 303 LAPLTSMAKSLSDGALRG-PGEVSAAMRGAGTIGQMSVPPAWKAPAVTTVRAFDATPMTT 361 L L +M S A+ G V+ +M AG+IGQ+SVPP+W AP+ + A + +TT Sbjct 277 LG-LGAMFSSAERSAVGGATNAVTVSMSRAGSIGQLSVPPSWAAPSSGSASALSVSGLTT 335 Query 362 LPGGDAPAAGVPGLPGMPASGAGRA-GVVPRYGVRLTVMTRPLSGG 406 +PG + G PG+PGMP RA V+PRYGVRLTVM RP + G Sbjct 336 IPGTEVAEQGAPGMPGMPVGTGKRATSVIPRYGVRLTVMARPPAAG 381 >gi|167970194|ref|ZP_02552471.1| PPE family protein [Mycobacterium tuberculosis H37Ra] Length=480 Score = 281 bits (719), Expect = 1e-73, Method: Compositional matrix adjust. Identities = 185/399 (47%), Positives = 240/399 (61%), Gaps = 42/399 (10%) Query 3 MDFAMLPPEVNSTRMYSGPGAGSLWAAAAAWDQVSAELQSAAETYRSVIASLTGWQWLGP 62 MDFA+LPPEVNS RMY+GPGAGSL AAA WD ++AEL + AE Y SV++ L W GP Sbjct 1 MDFALLPPEVNSARMYTGPGAGSLLAAAGGWDSLAAELATTAEAYGSVLSGLAALHWRGP 60 Query 63 SSVRMGAAVTPYVEWLTTTAAQARQTATQITAAATGFEQAFAMTVPPPAIMANRAQVLSL 122 ++ M PY+ WL TTA + +QTA Q AAA FEQA+AMT+PPP + ANR Q+L+L Sbjct 61 AAESMAVTAAPYIGWLYTTAEKTQQTAIQARAAALAFEQAYAMTLPPPVVAANRIQLLAL 120 Query 123 IATNFFGQNTAAIAALETQYAEMWEQDATAMYDYAATSAAARTLTPFTSPQQDTNSAGLP 182 IATNFFGQNTAAIAA E QYAEMW QDA AMY YA SAAA LTPF+ P+Q TN AGL Sbjct 121 IATNFFGQNTAAIAATEAQYAEMWAQDAAAMYGYATASAAAALLTPFSPPRQTTNPAGLT 180 Query 183 AQSAEVSRATANAGAADGNWLGNLLEEIGILLLPIAPELTPFFLEAGEIVNAIPFPSIVG 242 AQ+A VS+AT + L L+E + + + A+ PS + Sbjct 181 AQAAAVSQAT--------DPLSLLIETV------------------TQALQALTIPSFIP 214 Query 243 DEFCLLDGLLAWYATIGSINNINSMGTGIIGAEKNLGILPELGSAAAAAAPPPADIAPAF 302 ++F LD + A YAT+G ++ S G IGAE NLG+L +G PA++ P Sbjct 215 EDFTFLDAIFAGYATVGVTQDVESFVAGTIGAESNLGLL-NVGDEN------PAEVTPGD 267 Query 303 L---------APLTSMAKSLSDGALRGPGEVSAAMRGAGTIGQMSVPPAWKAPAVTTVRA 353 +P ++ S + GA V A++ A +IGQ+SVPP+W AP+ V A Sbjct 268 FGIGELVSATSPGGGVSASGAGGAASVGNTVLASVGRANSIGQLSVPPSWAAPSTRPVSA 327 Query 354 FDATPMTTLPGGDAPAAGVPGLPGMPASGAGRAGVVPRY 392 +TTLPG D G+PG+PG+P + +GV+PRY Sbjct 328 LSPAGLTTLPGTDVAEHGMPGVPGVPVAAGRASGVLPRY 366 >gi|118617918|ref|YP_906250.1| PPE family protein [Mycobacterium ulcerans Agy99] gi|118570028|gb|ABL04779.1| PPE family protein [Mycobacterium ulcerans Agy99] Length=381 Score = 279 bits (713), Expect = 6e-73, Method: Compositional matrix adjust. Identities = 199/406 (50%), Positives = 257/406 (64%), Gaps = 27/406 (6%) Query 3 MDFAMLPPEVNSTRMYSGPGAGSLWAAAAAWDQVSAELQSAAETYRSVIASLTGWQWLGP 62 M++A LPPEVNS RMYSGPG+ SL AAAA+WD V+ EL SAAE YRSVI++L+G W GP Sbjct 1 MNYAFLPPEVNSARMYSGPGSASLLAAAASWDMVAIELASAAEGYRSVISTLSGMYWWGP 60 Query 63 SSVRMGAAVTPYVEWLTTTAAQARQTATQITAAATGFEQAFAMTVPPPAIMANRAQVLSL 122 +S M AA P++ WL T A A +TA Q AAA +EQA+AMTVPP + ANRA +++L Sbjct 61 ASAAMLAATGPFIGWLEITGALASETANQAAAAAAAYEQAYAMTVPPIVVAANRALLVAL 120 Query 123 IATNFFGQNTAAIAALETQYAEMWEQDATAMYDYAATSAAARTLTPFTSPQQDTNSAGLP 182 +A+N FGQNTAAI A E +YAEMW QDA AMYDYAATSA A L PF++P QDTN AGL Sbjct 121 VASNIFGQNTAAIEATEAEYAEMWAQDAGAMYDYAATSAMATALVPFSAPGQDTNPAGLA 180 Query 183 AQSAEVSRATANAGAADGNWLGNLLEEIGILLLPIAPELTPFFLEAGEIVNAIPFPSIVG 242 AQSA VS+A NA A+ + + L + P+ P +P+I+ Sbjct 181 AQSAAVSQAAGNAPASA--------QSVWSQLTSLVPDALPSLSN---------WPNILP 223 Query 243 DEFCLLDGLLAWYATIGSINNINSMGTGIIGAEKNLGILPELGSAAAAAAPPPADIAPAF 302 D+F +LDG+ A YAT+G ++ S GIIGA NLG+L AA+ A++ P Sbjct 224 DDFSMLDGIFAMYATVGVTQDVESFCAGIIGAGNNLGLL-------GAASENSAEVTPGA 276 Query 303 LAPLTSMAKSLSDGALRG-PGEVSAAMRGAGTIGQMSVPPAWKAPAVTTVRAFDATPMTT 361 L L +M S A+ G V+ +M AG+IGQ+SVPP+W AP+ + A + +TT Sbjct 277 LG-LGAMFSSAERSAVGGATNAVTVSMSRAGSIGQLSVPPSWAAPSSGSASALSVSGLTT 335 Query 362 LPGGDAPAAGVPGLPGMPASGAGRA-GVVPRYGVRLTVMTRPLSGG 406 +PG + G PG+PGMP RA V+ RYGVRLTVM RP + G Sbjct 336 IPGTEVAEQGAPGMPGMPVGTGKRATSVILRYGVRLTVMARPPAAG 381 >gi|323717804|gb|EGB27001.1| hypothetical protein TMMG_00020 [Mycobacterium tuberculosis CDC1551A] Length=140 Score = 276 bits (706), Expect = 4e-72, Method: Compositional matrix adjust. Identities = 140/140 (100%), Positives = 140/140 (100%), Gaps = 0/140 (0%) Query 1 MFMDFAMLPPEVNSTRMYSGPGAGSLWAAAAAWDQVSAELQSAAETYRSVIASLTGWQWL 60 MFMDFAMLPPEVNSTRMYSGPGAGSLWAAAAAWDQVSAELQSAAETYRSVIASLTGWQWL Sbjct 1 MFMDFAMLPPEVNSTRMYSGPGAGSLWAAAAAWDQVSAELQSAAETYRSVIASLTGWQWL 60 Query 61 GPSSVRMGAAVTPYVEWLTTTAAQARQTATQITAAATGFEQAFAMTVPPPAIMANRAQVL 120 GPSSVRMGAAVTPYVEWLTTTAAQARQTATQITAAATGFEQAFAMTVPPPAIMANRAQVL Sbjct 61 GPSSVRMGAAVTPYVEWLTTTAAQARQTATQITAAATGFEQAFAMTVPPPAIMANRAQVL 120 Query 121 SLIATNFFGQNTAAIAALET 140 SLIATNFFGQNTAAIAALET Sbjct 121 SLIATNFFGQNTAAIAALET 140 >gi|183983449|ref|YP_001851740.1| PPE family protein, PPE51_3 [Mycobacterium marinum M] gi|183176775|gb|ACC41885.1| PPE family protein, PPE51_3 [Mycobacterium marinum M] Length=380 Score = 268 bits (685), Expect = 1e-69, Method: Compositional matrix adjust. Identities = 201/406 (50%), Positives = 257/406 (64%), Gaps = 28/406 (6%) Query 3 MDFAMLPPEVNSTRMYSGPGAGSLWAAAAAWDQVSAELQSAAETYRSVIASLTGWQWLGP 62 M++A LPPEVNS RMYSGPG SL AAAA+WD V+ EL S AE YRSVI++L+G W GP Sbjct 1 MNYAFLPPEVNSARMYSGPGPESLLAAAASWDMVAIELASTAEGYRSVISTLSGMYWWGP 60 Query 63 SSVRMGAAVTPYVEWLTTTAAQARQTATQITAAATGFEQAFAMTVPPPAIMANRAQVLSL 122 +S M AA P+++WL T A A +TA Q TAAA +EQA+AMTVPP + ANRA + +L Sbjct 61 ASAAMLAATGPFIDWLEITGALASETANQATAAAAAYEQAYAMTVPPIVVAANRALLAAL 120 Query 123 IATNFFGQNTAAIAALETQYAEMWEQDATAMYDYAATSAAARTLTPFTSPQQDTNSAGLP 182 IA+N FGQNTAAI A E +YAEMW QDA AMYDYAATSA A L PF PQQ TN AGLP Sbjct 121 IASNIFGQNTAAIEATEAEYAEMWAQDAGAMYDYAATSAMATALEPFPGPQQHTNPAGLP 180 Query 183 AQSAEVSRATANAGAADGNWLGNLLEEIGILLLPIAPELTPFFLEAGEIVNAIPFPSIVG 242 AQ A VS+A A++ + L L I L+P +A +++ P I+ Sbjct 181 AQGAAVSKAAASSEEGSQSLLSQL-----IALVP----------QALQVLGIWP---ILP 222 Query 243 DEFCLLDGLLAWYATIGSINNINSMGTGIIGAEKNLGILPELGSAAAAAAPPPADIAPAF 302 +EF LLD + A YAT+G + ++ II A+ NLG+L AA+ PA++AP Sbjct 223 EEFTLLDAIFAMYATVGMTADAVTIPVAIIAADNNLGLL-------GAASENPAELAPGA 275 Query 303 LAPLTSMAKSLSDGALRGPGE-VSAAMRGAGTIGQMSVPPAWKAPAVTTVRAFDATPMTT 361 L + + S GA RG V+ +M AG+IGQ+SVPP+W AP+ + A + +TT Sbjct 276 LG-VGAKLSSAEMGAARGAANAVTVSMSRAGSIGQLSVPPSWAAPSSGSASALSVSGLTT 334 Query 362 LPGGDAPAAGVPGLPGMPASGAGRA-GVVPRYGVRLTVMTRPLSGG 406 +PG + G PG+PGMP RA V+PRYGVRLTVM RP + G Sbjct 335 IPGTEVAEQGAPGVPGMPVGTGKRATSVIPRYGVRLTVMARPPAAG 380 >gi|289448814|ref|ZP_06438558.1| PPE family protein [Mycobacterium tuberculosis CPHL_A] gi|289421772|gb|EFD18973.1| PPE family protein [Mycobacterium tuberculosis CPHL_A] Length=387 Score = 260 bits (665), Expect = 3e-67, Method: Compositional matrix adjust. Identities = 190/369 (52%), Positives = 232/369 (63%), Gaps = 38/369 (10%) Query 3 MDFAMLPPEVNSTRMYSGPGAGSLWAAAAAWDQVSAELQSAAETYRSVIASLTGWQWLGP 62 MD+A LPPE+NS RMYSGPG S+ AAA+WD ++AEL SAAE Y SVIA LTG W GP Sbjct 1 MDYAFLPPEINSARMYSGPGPNSMLVAAASWDALAAELASAAENYGSVIARLTGMHWWGP 60 Query 63 SSVRMGAAVTPYVEWLTTTAAQARQTATQITAAATGFEQAFAMTVPPPAIMANRAQVLSL 122 +S M A PYVEWL TAAQ +QTATQ AAA FEQA AMTVPP + ANRA++ +L Sbjct 61 ASTSMLAMSAPYVEWLERTAAQTKQTATQARAAAAAFEQAHAMTVPPALVTANRAELKAL 120 Query 123 IATNFFGQNTAAIAALETQYAEMWEQDATAMYDYAATSAAARTLTPFTSPQQDTNSAGLP 182 IA+N GQNTAAIAA+E QYAEMW QDA AMY YA TSAAAR LTPF+SPQQ TN AGL Sbjct 121 IASNLLGQNTAAIAAIEAQYAEMWAQDAAAMYGYATTSAAARQLTPFSSPQQTTNPAGLA 180 Query 183 AQSAEVSRATANAGAADGNWLGNLLEEIGILLLPIAPELTPFFLEAGEIVNAIPFPSIVG 242 AQ+A V++A N+ GN + +L+ F +A E +P+I+ Sbjct 181 AQNAAVTQAATNSA-------GNTPTALS--------QLSSFLSQAVEAPTG--WPNILP 223 Query 243 DEFCLLDGLLAWYATIGSINNINSMGTGIIGAEKNLGILPELGSAAAAAAPPPADIAPAF 302 D+F +LDG+ A YAT+G +I S+ GIIGAE NLG+L AA+ PA++AP Sbjct 224 DDFTILDGIFAAYATVGVTQDIESICAGIIGAENNLGLL-------GAASENPAELAPGA 276 Query 303 L---APLTSMAK----SLSDGALRGPGEVSAAMRGAGTIGQMSVPPAWKAPAVTTVRAFD 355 A L+S K S+ D L G AG+IG MSVPP+W P+ T V A Sbjct 277 FGIDAALSSAEKGAAASMHDAVLASAGR-------AGSIGPMSVPPSWATPSSTPVSALS 329 Query 356 ATPMTTLPG 364 +TTL G Sbjct 330 GAGLTTLDG 338 >gi|289575846|ref|ZP_06456073.1| PPE family protein [Mycobacterium tuberculosis K85] gi|339633142|ref|YP_004724784.1| PPE family protein [Mycobacterium africanum GM041182] gi|289540277|gb|EFD44855.1| PPE family protein [Mycobacterium tuberculosis K85] gi|339332498|emb|CCC28213.1| PPE family protein [Mycobacterium africanum GM041182] Length=345 Score = 250 bits (639), Expect = 3e-64, Method: Compositional matrix adjust. Identities = 182/348 (53%), Positives = 222/348 (64%), Gaps = 38/348 (10%) Query 3 MDFAMLPPEVNSTRMYSGPGAGSLWAAAAAWDQVSAELQSAAETYRSVIASLTGWQWLGP 62 MD+A LPPE+NS RMYSGPG S+ AAA+WD ++AEL SAAE Y SVIA LTG W GP Sbjct 1 MDYAFLPPEINSARMYSGPGPNSMLVAAASWDALAAELASAAENYGSVIARLTGMHWWGP 60 Query 63 SSVRMGAAVTPYVEWLTTTAAQARQTATQITAAATGFEQAFAMTVPPPAIMANRAQVLSL 122 +S M A PYVEWL TAAQ +QTATQ AAA FEQA AMTVPP + ANRA++ +L Sbjct 61 ASTSMLAMSAPYVEWLERTAAQTKQTATQARAAAAAFEQAHAMTVPPALVTANRAELKAL 120 Query 123 IATNFFGQNTAAIAALETQYAEMWEQDATAMYDYAATSAAARTLTPFTSPQQDTNSAGLP 182 IA+N GQNTAAIAA+E QYAEMW QDA AMY YA TSAAAR LTPF+SPQQ TN AGL Sbjct 121 IASNLLGQNTAAIAAIEAQYAEMWAQDAAAMYGYATTSAAARQLTPFSSPQQTTNPAGLA 180 Query 183 AQSAEVSRATANAGAADGNWLGNLLEEIGILLLPIAPELTPFFLEAGEIVNAIPFPSIVG 242 AQ+A V++A N+ GN + +L+ F +A E +P+I+ Sbjct 181 AQNAAVTQAATNSA-------GNTPTALS--------QLSSFLSQAVEAPTG--WPNILP 223 Query 243 DEFCLLDGLLAWYATIGSINNINSMGTGIIGAEKNLGILPELGSAAAAAAPPPADIAPAF 302 D+F +LDG+ A YAT+G +I S+ GIIGAE NLG+L AA+ PA++AP Sbjct 224 DDFTILDGIFAAYATVGVTQDIESICAGIIGAENNLGLL-------GAASENPAELAPGA 276 Query 303 L---APLTSMAK----SLSDGALRGPGEVSAAMRGAGTIGQMSVPPAW 343 A L+S K S+ D L G AG+IG MSVPP+W Sbjct 277 FGIDAALSSAEKGAAASMHDAVLASAGR-------AGSIGPMSVPPSW 317 >gi|240172861|ref|ZP_04751520.1| PPE family protein, PPE31 [Mycobacterium kansasii ATCC 12478] Length=401 Score = 227 bits (579), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 185/421 (44%), Positives = 237/421 (57%), Gaps = 41/421 (9%) Query 3 MDFAMLPPEVNSTRMYSGPGAGSLWAAAAAWDQVSAELQSAAETYRSVIASLTGWQWLGP 62 +DFAMLPPE+NS RMYSGPG+G + AAA+AW ++AEL++ A +Y SV+A+LTG +W GP Sbjct 5 LDFAMLPPEINSARMYSGPGSGPMLAAASAWKSLAAELRATALSYHSVLAALTGEEWYGP 64 Query 63 SSVRMGAAVTPYVEWLTTTAAQARQTATQITAAATGFEQAFAMTVPPPAIMANRAQVLSL 122 +S M AA PYV WL TTA QA QTA Q AAA +E AF TVPPP I ANRAQ+++L Sbjct 65 ASASMAAAAAPYVAWLNTTAVQAEQTAVQAEAAAGAYEAAFGATVPPPVIAANRAQLMAL 124 Query 123 IATNFFGQNTAAIAALETQYAEMWEQDATAMYDYAATSAAARTLTPFTSPQQDTNSAGLP 182 IATN GQNT AIAA E QY EMW QDA AMY YA +SAAA L+PF PQQ TN +GL Sbjct 125 IATNILGQNTPAIAATEAQYTEMWAQDAMAMYGYAGSSAAATQLSPFVEPQQATNPSGLA 184 Query 183 AQSAEVSRATANAGAADGNWLGNLLEEIGILLLPIAPELTPFFLEAGEIVNAIPFPSIVG 242 AQ+A V+ A+AN+ + L L+ + P L+ N+ + ++ Sbjct 185 AQAAAVTEASANSAGNQSSTLSGLI------------SMVPSALQGLSGPNSTSWLQVIW 232 Query 243 DEFCLLDGL-LAWYATIGSI--------NNINSMGTGIIG---AEKNLGILPELGSAAAA 290 D LL G AW+ T+ ++ N I S G + G A +L +A AA Sbjct 233 D---LLTGSGPAWWQTLWNVWGPNANVWNTITSTGLFVPGSTFAPFMASVLAGAVAADAA 289 Query 291 AAPPPADIAPAFLAPLTSMAKSLSDGALRGPGEVSAAMRGAGTIGQMSVPPAWKAPAVTT 350 A +A + S G+ VSA + AG +G++SVPPAW A A Sbjct 290 QDASAAAAGVGSGLAAGPLASTGSVGS-----AVSAGLGNAGIVGKLSVPPAWTAAAPLH 344 Query 351 V---RAFDATPMTTLPGGDAPAAGVPGLP--GMPASGAGRAGVVPRYGVRLTVMTRPLSG 405 A TPM P A AAG+PG+P M GRA VP+YG R T + RP + Sbjct 345 SPLGSALGGTPMVAPP--PAVAAGMPGMPFGNMAGQPFGRA--VPQYGFRPTFVARPPAA 400 Query 406 G 406 G Sbjct 401 G 401 >gi|41409283|ref|NP_962119.1| hypothetical protein MAP3185 [Mycobacterium avium subsp. paratuberculosis K-10] gi|41398103|gb|AAS05733.1| hypothetical protein MAP_3185 [Mycobacterium avium subsp. paratuberculosis K-10] gi|336459363|gb|EGO38306.1| PPE family protein [Mycobacterium avium subsp. paratuberculosis S397] Length=362 Score = 224 bits (571), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 184/406 (46%), Positives = 226/406 (56%), Gaps = 46/406 (11%) Query 3 MDFAMLPPEVNSTRMYSGPGAGSLWAAAAAWDQVSAELQSAAETYRSVIASLTGWQWLGP 62 MDF LPPEVNS RMY+GPG+GSL AAA +WD ++AEL A Y SV+A LTG W GP Sbjct 1 MDFGFLPPEVNSARMYAGPGSGSLLAAAGSWDSLAAELSITAAVYESVLAGLTGLYWHGP 60 Query 63 SSVRMGAAVTPYVEWLTTTAAQARQTATQITAAATGFEQAFAMTVPPPAIMANRAQVLSL 122 +S M A PYV WL TTA +A+QTATQ AAA +E A AMTVPP A+ ANR Q+ +L Sbjct 61 ASRAMAAGAAPYVGWLHTTAERAQQTATQARAAAAAYELAHAMTVPPAAVAANRTQLAAL 120 Query 123 IATNFFGQNTAAIAALETQYAEMWEQDATAMYDYAATSAAARTLTPFTSPQQDTNSAGLP 182 +ATNFFGQNTAAIAA E QYAE W QDA AMY Y+A+SAAA +PF SP++ T+ G+ Sbjct 121 VATNFFGQNTAAIAATEAQYAEYWAQDAAAMYAYSASSAAAAQFSPFPSPRRTTDPGGV- 179 Query 183 AQSAEVSRATANAGAADGNWLGNLLEEIGILLLPIAPELTPFFLEAGEIVNAIPFPSIVG 242 TA A G+ + G ++P AG + IP Sbjct 180 ---------TAQQAAVAAAETGSTGTDSGAQVIPP---------TAG--ASEIPL----- 214 Query 243 DEFCLLDGLLAWYATIGSINNINSMGTGIIGAEKNLGILPELGSAAAAAAPPPADIAPAF 302 +F +LD +L T SI + GII A+KNLGILP L + PA Sbjct 215 -DFRILDTILGAQTTFRSIFTTEGIPAGIIQADKNLGILPNLAT------------VPAA 261 Query 303 LAPLTSMAKSLSDGALRGPGEVSAAMRGAGTIGQMSVPPAWKAPAVTTVRAFDATPMTTL 362 L +++ S S G G + A + A IG MSVP W A V A T + Sbjct 262 LPRTPALSASPS-----GLGRIDAVLARAARIGPMSVPAGWTAATGNPVAAAPVTGWSEP 316 Query 363 PGGDA-PAAGVPGLPGMPASGAGRAG-VVPRYGVRLTVMTRPLSGG 406 DA P PGLPG+P + RA VVPRYGVR+TVM RP + G Sbjct 317 SAADARPGVTAPGLPGIPGATLRRAALVVPRYGVRITVMARPPAAG 362 >gi|118466535|ref|YP_883168.1| PPE family protein [Mycobacterium avium 104] gi|118167822|gb|ABK68719.1| PPE family protein [Mycobacterium avium 104] Length=362 Score = 224 bits (570), Expect = 3e-56, Method: Compositional matrix adjust. Identities = 184/406 (46%), Positives = 225/406 (56%), Gaps = 46/406 (11%) Query 3 MDFAMLPPEVNSTRMYSGPGAGSLWAAAAAWDQVSAELQSAAETYRSVIASLTGWQWLGP 62 MDF LPPEVNS RMY+GPG+GSL AAA +WD ++AEL A Y SV+A LTG W GP Sbjct 1 MDFGFLPPEVNSARMYAGPGSGSLLAAAGSWDSLAAELSITAAVYESVLAGLTGLYWHGP 60 Query 63 SSVRMGAAVTPYVEWLTTTAAQARQTATQITAAATGFEQAFAMTVPPPAIMANRAQVLSL 122 +S M A PYV WL TTA +A+QTATQ AAA +E A AMTVPP A+ ANR Q+ +L Sbjct 61 ASRAMAAGAAPYVGWLHTTAERAQQTATQARAAAAAYELAHAMTVPPAAVAANRTQLAAL 120 Query 123 IATNFFGQNTAAIAALETQYAEMWEQDATAMYDYAATSAAARTLTPFTSPQQDTNSAGLP 182 +ATNFFGQNTAAIAA E QYAE W QDA AMY Y+A+SAAA +PF SP++ T+ G+ Sbjct 121 VATNFFGQNTAAIAATEAQYAEYWAQDAAAMYAYSASSAAAAQFSPFASPRRTTDPGGV- 179 Query 183 AQSAEVSRATANAGAADGNWLGNLLEEIGILLLPIAPELTPFFLEAGEIVNAIPFPSIVG 242 TA A G+ + G ++P AG + IP Sbjct 180 ---------TAQQAAVAAAETGSTGTDSGTQVIPP---------TAG--ASEIPL----- 214 Query 243 DEFCLLDGLLAWYATIGSINNINSMGTGIIGAEKNLGILPELGSAAAAAAPPPADIAPAF 302 +F +LD +L T SI + GII A+KNLGILP L + AA PA Sbjct 215 -DFRILDTILGAQTTFRSIFTTEGIPAGIIQADKNLGILPNLATIPAALPRTPA------ 267 Query 303 LAPLTSMAKSLSDGALRGPGEVSAAMRGAGTIGQMSVPPAWKAPAVTTVRAFDATPMTTL 362 L++ L G + A + A IG MSVP W A V A T + Sbjct 268 ---LSASPTGL--------GRIDAVLARAARIGPMSVPAGWTAATGNPVAAAPVTGWSEP 316 Query 363 PGGDA-PAAGVPGLPGMPASGAGRAG-VVPRYGVRLTVMTRPLSGG 406 DA P PGLPG+P + RA VVPRYGVR+TVM RP + G Sbjct 317 SAADARPGVTAPGLPGIPGATLRRAALVVPRYGVRITVMARPPAAG 362 >gi|212596159|gb|ACJ35556.1| PPE33 [Mycobacterium avium subsp. avium] Length=362 Score = 220 bits (560), Expect = 4e-55, Method: Compositional matrix adjust. Identities = 182/406 (45%), Positives = 224/406 (56%), Gaps = 46/406 (11%) Query 3 MDFAMLPPEVNSTRMYSGPGAGSLWAAAAAWDQVSAELQSAAETYRSVIASLTGWQWLGP 62 MDF LPPEVNS RMY+GPG+GSL AAA +WD ++AEL A Y SV+ LTG W GP Sbjct 1 MDFGFLPPEVNSARMYAGPGSGSLLAAAGSWDSLAAELSITAAVYESVLGGLTGLYWHGP 60 Query 63 SSVRMGAAVTPYVEWLTTTAAQARQTATQITAAATGFEQAFAMTVPPPAIMANRAQVLSL 122 +S M A PYV WL TTA +A+QTATQ AAA +E A AMTVPP A+ ANR Q+ +L Sbjct 61 ASRAMAAGAAPYVGWLHTTAERAQQTATQARAAAAAYELAHAMTVPPAAVAANRTQLAAL 120 Query 123 IATNFFGQNTAAIAALETQYAEMWEQDATAMYDYAATSAAARTLTPFTSPQQDTNSAGLP 182 +ATNFFGQNTAAIAA E QYAE W QDA AMY Y+A+SAAA +PF SP++ T+ G+ Sbjct 121 VATNFFGQNTAAIAATEAQYAEYWAQDAAAMYAYSASSAAAAQFSPFASPRRTTDPGGV- 179 Query 183 AQSAEVSRATANAGAADGNWLGNLLEEIGILLLPIAPELTPFFLEAGEIVNAIPFPSIVG 242 TA A G+ + G ++P AG + IP Sbjct 180 ---------TAQQAAVAAAETGSTGTDSGAQVIPP---------TAGG--SEIPL----- 214 Query 243 DEFCLLDGLLAWYATIGSINNINSMGTGIIGAEKNLGILPELGSAAAAAAPPPADIAPAF 302 +F +LD +L T SI + GII A++NLGILP L + AA PA Sbjct 215 -DFRILDTILGAQTTFRSIFTTEGIPAGIIQADENLGILPNLATVPAALPRTPA------ 267 Query 303 LAPLTSMAKSLSDGALRGPGEVSAAMRGAGTIGQMSVPPAWKAPAVTTVRAFDATPMTTL 362 L++ L G + A + A IG MSVP W A V A T + Sbjct 268 ---LSASPTGL--------GRIDAVLARAARIGPMSVPAGWTAATGNPVAAAPVTGWSEP 316 Query 363 PGGDA-PAAGVPGLPGMPASGAGRAG-VVPRYGVRLTVMTRPLSGG 406 DA P PGLPG+P + RA VVPRYGVR+TVM RP + G Sbjct 317 SAADARPGVTAPGLPGIPGATLRRAALVVPRYGVRITVMARPPAAG 362 >gi|183982688|ref|YP_001850979.1| PPE family protein, PPE31_1 [Mycobacterium marinum M] gi|183176014|gb|ACC41124.1| PPE family protein, PPE31_1 [Mycobacterium marinum M] Length=422 Score = 214 bits (546), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 182/435 (42%), Positives = 235/435 (55%), Gaps = 44/435 (10%) Query 3 MDFAMLPPEVNSTRMYSGPGAGSLWAAAAAWDQVSAELQSAAETYRSVIASLTGWQWLGP 62 MDFA LPPE+NS RMYSGPG+ + AA AWD ++AEL+S A Y +VIA LTG WLGP Sbjct 1 MDFAALPPEINSIRMYSGPGSAPMLAAVTAWDGLAAELRSTAAAYETVIAVLTGDGWLGP 60 Query 63 SSVRMGAAVTPYVEWLTTTAAQARQTATQITAAATGFEQAFAMTVPPPAIMANRAQVLSL 122 +S M AAV PY+ W+ T QA QTA Q AAA FE AFAMTVPP + ANR Q+ +L Sbjct 61 ASESMEAAVFPYLAWMNITGMQAEQTARQAAAAAGAFEAAFAMTVPPAQVAANRTQLQTL 120 Query 123 IATNFFGQNTAAIAALETQYAEMWEQDATAMYDYAATSAAARTLTPFTSPQQDTNSAGLP 182 +ATN GQNT AIAA E Y EMW QDA AMY YA SAAA TLT FT P Q T+ +GL Sbjct 121 VATNLLGQNTPAIAATEAAYGEMWAQDAAAMYGYAVGSAAASTLTQFTQPAQTTDPSGLA 180 Query 183 AQSAEVSRATANAGAADGNWLGNLLE-EIGILLLPIAPELTPFFL-EAGEIVNAIPFPSI 240 +QSA V++A G+ +GNL + E+ L+ + L A ++AIP + Sbjct 181 SQSAAVTQAV-------GSTVGNLTQTELPQLMSAVPASLQGLASPAAASPIDAIPGSGL 233 Query 241 VGDEFCLLDG-------------LLAWYATIGSINNINSMGTGIIGAEKNLGILPELGSA 287 + LDG L+ + + G ++ +G I A ++ + LG+ Sbjct 234 LAALLNFLDGNDGNPYGVFLNSSLVNGFVSAGYVSPA-VVGPAIWAAMADINAV-ALGAQ 291 Query 288 AAAAAPP--PADIAPAFLAPLTSMAKSLS-------DGALRGPGEVSAAMRGAGTIGQMS 338 +AA PP + P+++ P S A S A G G +SA M A +G+MS Sbjct 292 ESAAVPPMGSGEGNPSWI-PAASPASPESLPVLGEETAATLGTGGISAGMNQAELVGRMS 350 Query 339 VPPAWKAPAVTTVRAFDA------TPMTTLPGGDAPAAGVPGLPGMPASGAGRA-GVVPR 391 VP +W A A T +P A G+PG+PGMPA G G PR Sbjct 351 VPQSWGVATAVANHAGAAAPGGGWTSTAVVPEA---AVGMPGIPGMPAGIYGHNLGNAPR 407 Query 392 YGVRLTVMTRPLSGG 406 YG R T+M RP + G Sbjct 408 YGFRPTIMGRPPAAG 422 >gi|183982689|ref|YP_001850980.1| PPE family protein [Mycobacterium marinum M] gi|183176015|gb|ACC41125.1| PPE family protein [Mycobacterium marinum M] Length=409 Score = 205 bits (521), Expect = 1e-50, Method: Compositional matrix adjust. Identities = 180/420 (43%), Positives = 229/420 (55%), Gaps = 32/420 (7%) Query 3 MDFAMLPPEVNSTRMYSGPGAGSLWAAAAAWDQVSAELQSAAETYRSVIASLTGWQWLGP 62 MDF LPPEVNS RMYSGPG+ + AA AAWD VSAE+ A Y SV+++L WLGP Sbjct 6 MDFGALPPEVNSLRMYSGPGSAPMLAAMAAWDDVSAEMLLTAAAYESVLSALLSDGWLGP 65 Query 63 SSVRMGAAVTPYVEWLTTTAAQARQTATQITAAATGFEQAFAMTVPPPAIMANRAQVLSL 122 +S M AA PYV WL+ T QA QTA Q AAA FE AFAMTVPP + ANR Q+L+L Sbjct 66 ASAAMAAAAAPYVTWLSATGLQAAQTAGQAAAAAAAFEAAFAMTVPPSVVAANRVQLLTL 125 Query 123 IATNFFGQNTAAIAALETQYAEMWEQDATAMYDYAATSAAARTLTPFTSPQQDTNSAGLP 182 +ATNF G NT AIAA E +YAEMW QDATAMY YAA SA A TL PF+ P + +GL Sbjct 126 VATNFLGINTPAIAATEAEYAEMWAQDATAMYGYAAGSAVASTLEPFSEPAHTASRSGLA 185 Query 183 AQSAEVSRATANAGAADGNWLGNLLE-EIGILLLPIAPELTPFFLEAGEIVNAIPFPSIV 241 Q+A V++A + A +G L + E+ L+ + L A ++ I ++ Sbjct 186 GQTAAVAQAASTA-------MGGLTQTELPQLMSAVPASLQGLAAPAAAPLDTIAGSGLL 238 Query 242 GDEFCLLDGLLAWYATIGSINNI---NSMGTGIIGAEKNLG--ILPELGSAAAAAAPPPA 296 D LDG G+ I +S+ G+I A ++P + SA A Sbjct 239 ADILNFLDG------NDGNAFGIFLNSSLANGVISAGYTAPGIVVPAVTSAMADVNALAL 292 Query 297 DIAPAFLAPLTSMAKSLSDGAL--------RGPGEVSAAMRGAGTIGQMSVPPAWKAPAV 348 D P P+T S S A+ G G V+A A +G++SVPP+W Sbjct 293 DGLPGIALPITG---SDSGDAVWTRMTVPQSGLGGVAAGTNQATMVGRLSVPPSWAGTTE 349 Query 349 TTVRAFDATPMTTLPGGDAPAAGVPGLPGMPASGA-GRA-GVVPRYGVRLTVMTRPLSGG 406 T A P +A +PG+PG+PA GA R+ G PRYG RLT+M RPLSGG Sbjct 350 VTDHVATALPGAGTATAPEASAAMPGVPGVPAPGAYARSYGTGPRYGFRLTIMPRPLSGG 409 >gi|183981114|ref|YP_001849405.1| PPE family protein [Mycobacterium marinum M] gi|183174440|gb|ACC39550.1| PPE family protein [Mycobacterium marinum M] Length=380 Score = 199 bits (506), Expect = 8e-49, Method: Compositional matrix adjust. Identities = 163/411 (40%), Positives = 211/411 (52%), Gaps = 38/411 (9%) Query 3 MDFAMLPPEVNSTRMYSGPGAGSLWAAAAAWDQVSAELQSAAETYRSVIASLTGWQWLGP 62 MDF +LPPE+NS RMYSGPG+ L A+AW ++AEL + A Y +VI+ L W+GP Sbjct 1 MDFGILPPEINSARMYSGPGSSPLLTVASAWSGLAAELSATANDYETVISGLQSQGWVGP 60 Query 63 SSVRMGAAVTPYVEWLTTTAAQARQTATQITAAATGFEQAFAMTVPPPAIMANRAQVLSL 122 SS M ++ PYV WL TAA Q+A++ AA+ +E AFA TVPPP I ANRA++ L Sbjct 61 SSEAMANSIWPYVAWLRATAAATEQSASKARIAASAYEAAFAATVPPPQIAANRAELTGL 120 Query 123 IATNFFGQNTAAIAALETQYAEMWEQDATAMYDYAATSAAARTLTPFTSPQQDTNSAGLP 182 I+TN GQN+AAIAA E QY EMW QDA MY YAA+ A A +LTPF SP Q TN Sbjct 121 ISTNVVGQNSAAIAAAEAQYGEMWSQDAATMYAYAASCATATSLTPFVSPPQTTNPTAAA 180 Query 183 AQSAEVSRATANAGAADGNWLGNLLEEI-GILLLPIAPELTPFFLEAGEIVNAIPFPSIV 241 Q+ +SRA A + L L+ E+ G+L +P + AG I Sbjct 181 TQAGTLSRAAATTTGTAQSTLSRLISEVPGVLQALTSPLASAASSTAGPI---------- 230 Query 242 GDEFCLLDGLLAWYATIGSINNINSMGTGIIGAEKNLGILPELGSAAAAAAPPPADIAPA 301 + L WYA + +++G GA GI + A A Sbjct 231 -------ERFLEWYAPFANF-FYDTLGLPFFGA----GITSFFAATAKTAG-----AIGP 273 Query 302 FLAPLTSMAKSLSDGALRGPGEVSAAMRGAGTIGQMSVPPAWK----APAVTTVRAF--D 355 A + + G G VSA++ A T+G++SVP W+ A + TT F D Sbjct 274 AAAAPAATVAATGAAEAVGAGPVSASLAQASTVGKLSVPHTWEGATPATSPTTASKFISD 333 Query 356 ATPMTTLPGGDAPAAGVPGLPGMPASGAGRAGVVPRYGVRLTVMTRPLSGG 406 ++ G GVP MP G G AG PRYGVRLTVM P S G Sbjct 334 VIEPESVEAGGNVIGGVP----MPGPGKGSAGAGPRYGVRLTVMPHPPSAG 380 >gi|296167733|ref|ZP_06849950.1| PPE family protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295897076|gb|EFG76691.1| PPE family protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length=406 Score = 198 bits (503), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 167/427 (40%), Positives = 214/427 (51%), Gaps = 43/427 (10%) Query 2 FMDFAMLPPEVNSTRMYSGPGAGSLWAAAAAWDQVSAELQSAAETYRSVIASLTGWQWLG 61 +DF PPE NS RMY+GPG +L AAA+AW+ ++AEL S A Y VI +L+G +WLG Sbjct 1 MIDFGAAPPEYNSARMYTGPGPEALTAAASAWNGLAAELNSTALGYDKVITALSGEEWLG 60 Query 62 PSSVRMGAAVTPYVEWLTTTAAQARQTATQITAAATGFEQAFAMTVPPPAIMANRAQVLS 121 P+S M AV PYV W+ TTAAQA QTA Q+ AAAT +E A A TVPPP + ANRAQ Sbjct 61 PASASMAQAVAPYVAWMRTTAAQAEQTANQMHAAATAYETALAATVPPPLVAANRAQTAQ 120 Query 122 LIATNFFGQNTAAIAALETQYAEMWEQDATAMYDYAATSAAARTLTPFTSPQQDTNSAGL 181 L+ATN G NT AIA LE QY EMW QDA+ MY YA SAAA + PFT+ Q N + Sbjct 121 LLATNVLGLNTPAIAQLEAQYGEMWAQDASTMYSYAGQSAAATKVAPFTAAPQIANPSAQ 180 Query 182 PAQSAEVSRATANAGAAD-----GNWLGNLLEEIGILLLPIAPELT----PF----FLEA 228 Q V+ AT N+ A+ + + + + L P A + + PF +L Sbjct 181 ATQGTAVANATGNSAASSTQSVLSHAVSSTPNTLQALAAPAATQSSTTSAPFSEIWYLLT 240 Query 229 GEIVNAIPFPSIVG--DEFCLLDGLLAWYATIGSINNINSMGTGIIGAEKNLGILPELGS 286 G+ S V + F L WY T G MG + K G+L Sbjct 241 GQTTLPTSLGSFVNGYNPFSAL-----WYNTEGLPYFSVGMGNFGVQIAKTTGLL----- 290 Query 287 AAAAAAPPPADIAPAFLAPLTSMAKSLSDGALRGPGEVSAAMRGAGTI-GQMSVPPAWKA 345 APA A G +AA+ A ++ G++SVP +W A Sbjct 291 ---------NGAAPAVKALPGLGGLGGLLGGGATAAHPAAALGNAASVGGRLSVPVSWSA 341 Query 346 PAVTTVRAFDATPMTTLPGG-DAPAAGVPG-----LPGMPASGAGRAGVVPRYGVRLTVM 399 + A P++T+ DA AA PG +P A G AGV P+YG R TVM Sbjct 342 ASTPAPVLGQAIPVSTVSAAPDATAA--PGNLLGGMPLAGAGAGGHAGVGPKYGFRPTVM 399 Query 400 TRPLSGG 406 RP GG Sbjct 400 ARPPFGG 406 >gi|342861033|ref|ZP_08717682.1| PPE family protein [Mycobacterium colombiense CECT 3035] gi|342131477|gb|EGT84747.1| PPE family protein [Mycobacterium colombiense CECT 3035] Length=376 Score = 196 bits (499), Expect = 5e-48, Method: Compositional matrix adjust. Identities = 165/398 (42%), Positives = 213/398 (54%), Gaps = 30/398 (7%) Query 17 MYSGPGAGSLWAAAAAWDQVSAELQSAAETYRSVIASLTGWQWLGPSSVRMGAAVTPYVE 76 MY+GPG SL AAA +WD +SAEL S AE+Y SV+ L G QW GP++ M + Y+ Sbjct 1 MYTGPGLASLLAAAGSWDALSAELASTAESYESVLVGL-GLQWRGPAAESMAYSAARYMG 59 Query 77 WLTTTAAQARQTATQITAAATGFEQAFAMTVPPPAIMANRAQVLSLIATNFFGQNTAAIA 136 WL TA Q +QTA Q AA +EQA++MTVPPP I ANR + SL+ATN GQNTAAIA Sbjct 60 WLEATAEQTKQTAMQARTAAAAYEQAYSMTVPPPVIAANRTLLASLVATNIVGQNTAAIA 119 Query 137 ALETQYAEMWEQDATAMYDYAATSAAARTLTP-FTSPQQDTNSAGLPAQSAEVSRATANA 195 E QY++ W QDA AM Y+A+S A P F + + T +G+ AQ+A V+ A NA Sbjct 120 DTEAQYSDFWAQDAAAMAGYSASSTVATAQLPRFATANKSTTESGVSAQNAAVATANTNA 179 Query 196 GAADGNWLGNLLEEIGILLLPIAPELTP---FFLEAGEIVNAIPFPSIVGDEFCLLDGLL 252 GA + P P TP ++L+A + + F +LD + Sbjct 180 GAT--KVAAQTFSPLDT--SPTGPGSTPGDIYYLDASTTSSGT-------NAFRVLDAIQ 228 Query 253 AWYATIGSINNINSMGTGIIGAEKNLGILPELGSAAAAAAPPPADIAPAFLAPLTSMAKS 312 + N+ +GIIGAE NLGIL A P A A A + Sbjct 229 GTSLGFTAPYNMEQFVSGIIGAENNLGIL----------AKPGAAAANLAPAIAAPALRG 278 Query 313 LSDGALRGPGEVSAAMRGAGTIGQMSVPPAWKAPAVTTVRAFDATPMTTLPGGDAPAAG- 371 + G G G V+A + AGTIG MSVP +W AP T + + TT+PG + P A Sbjct 279 ATAGLGGGLGNVTATLSHAGTIGPMSVPASWAAPTSTHISPLEPAGFTTIPGTEEPVASG 338 Query 372 ---VPGLPGMPASGAGRAGVVPRYGVRLTVMTRPLSGG 406 PGLPG A+ + AGV PRYGVRLTVM RP + G Sbjct 339 YPGYPGLPGGGAARSAGAGVPPRYGVRLTVMPRPPAAG 376 >gi|240169314|ref|ZP_04747973.1| PPE family protein [Mycobacterium kansasii ATCC 12478] Length=383 Score = 192 bits (489), Expect = 7e-47, Method: Compositional matrix adjust. Identities = 107/183 (59%), Positives = 128/183 (70%), Gaps = 0/183 (0%) Query 3 MDFAMLPPEVNSTRMYSGPGAGSLWAAAAAWDQVSAELQSAAETYRSVIASLTGWQWLGP 62 MDF LPPEVNS RMY+GPG GSL AAA WD ++AEL + A YRSVIA LT +WLGP Sbjct 1 MDFGALPPEVNSVRMYAGPGPGSLAAAAGMWDSLAAELHATAGHYRSVIAGLTSGRWLGP 60 Query 63 SSVRMGAAVTPYVEWLTTTAAQARQTATQITAAATGFEQAFAMTVPPPAIMANRAQVLSL 122 +S+ M +A+ PYV W AA+A +TA+Q A G+E AFAMTVPPP + ANRA + +L Sbjct 61 ASLSMASALGPYVAWTAGVAARAAETASQAVLAVEGYEAAFAMTVPPPVVAANRALLAAL 120 Query 123 IATNFFGQNTAAIAALETQYAEMWEQDATAMYDYAATSAAARTLTPFTSPQQDTNSAGLP 182 +ATNFFGQN+ AIAA E +Y MW QDA AMY+YAA SA A LT SP + N GL Sbjct 121 VATNFFGQNSTAIAATEAEYGVMWAQDAAAMYEYAANSATACELTLLISPPEVINPVGLA 180 Query 183 AQS 185 QS Sbjct 181 GQS 183 >gi|212596661|gb|ACJ35596.1| PPE32 [Mycobacterium intracellulare ATCC 13950] Length=391 Score = 192 bits (488), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 180/411 (44%), Positives = 230/411 (56%), Gaps = 27/411 (6%) Query 3 MDFAMLPPEVNSTRMYSGPGAGSLWAAAAAWDQVSAELQSAAETYRSVIASLTGWQWLGP 62 MD+A +PPE+NS RMY+GPG GSL AAA +WD +SAEL SAAE Y S ++ L QW GP Sbjct 1 MDWAFVPPEINSARMYTGPGMGSLLAAAGSWDALSAELSSAAEGYESALSGL-DLQWRGP 59 Query 63 SSVRMGAAVTPYVEWLTTTAAQARQTATQITAAATGFEQAFAMTVPPPAIMANRAQVLSL 122 ++ M A Y EWL TA Q RQTA Q AA +EQA+AMTVPPP I ANR + +L Sbjct 60 AAQAMAFAAIRYAEWLQVTAEQTRQTAMQARTAAAAYEQAYAMTVPPPVITANRTLLAAL 119 Query 123 IATNFFGQNTAAIAALETQYAEMWEQDATAMYDYAATSAAARTLTPFTSPQQDTNSAGLP 182 +A+N GQNTAAIA E QYA+ W QDA AM Y+ +SAAA L F TN +G+ Sbjct 120 VASNIVGQNTAAIADTEAQYADYWAQDAAAMSAYSVSSAAATQLPRFAPATNSTNESGVS 179 Query 183 AQSAEVSRATANAGAADGNWLGNLLEEIGILLLPIAPELT-PFFLEAGEIVNAIPFPSIV 241 AQ A V+ A +NA A + + P++ + T + G+I + + Sbjct 180 AQKAAVTAANSNAAAN---------KAVTQSYSPLSTQQTGDTYNYYGDIYDLSDTTAAA 230 Query 242 GDE--FCLLDGLLAWYATIGSINNINSMGTGIIGAEKNLGILPELGSAAAAAAPPPADIA 299 G + F LD + + N+ +GIIGAE NLGIL + +AA A A Sbjct 231 GGKPFFAALDAIQGTGVGFSAPYNMEQFVSGIIGAENNLGILAKPLAAAPALA------- 283 Query 300 PAFLAPLTSMAKSLSDGALRGPGEVSAAMRGAGTIGQMSVPPAWKAPAVTTVRAFDATPM 359 L+S SL G G G V+A + AG+IG MSVP +W AP T + + Sbjct 284 ---APALSSTTTSLGGGLGAGLGNVTATLSHAGSIGPMSVPASWAAPTSTHISPLEPAGF 340 Query 360 TTLPGGDAPAAG----VPGLPGMPASGAGRAGVVPRYGVRLTVMTRPLSGG 406 TTLPG + P A PG+PG AS + AGV PRYGVRLTVM RP + G Sbjct 341 TTLPGTEEPVASGYPGYPGMPGGGASRSVGAGVPPRYGVRLTVMPRPPAAG 391 >gi|118618459|ref|YP_906791.1| PPE family protein [Mycobacterium ulcerans Agy99] gi|118570569|gb|ABL05320.1| PPE family protein [Mycobacterium ulcerans Agy99] Length=450 Score = 192 bits (487), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 156/365 (43%), Positives = 204/365 (56%), Gaps = 34/365 (9%) Query 3 MDFAMLPPEVNSTRMYSGPGAGSLWAAAAAWDQVSAELQSAAETYRSVIASLTGWQWLGP 62 MDFA LPPE+N RMYSGPG+ + AA AWD ++AEL+S A Y +VIA LTG WLGP Sbjct 1 MDFAALPPEINPIRMYSGPGSAPMLAAVTAWDGLAAELRSTAAAYETVIAVLTGDGWLGP 60 Query 63 SSVRMGAAVTPYVEWLTTTAAQARQTATQITAAATGFEQAFAMTVPPPAIMANRAQVLSL 122 +S M AAV PY+ W+ T QA QTA Q AAA FE AFAMTVPP + ANR Q+ +L Sbjct 61 ASESMEAAVFPYLAWMNITGMQAEQTARQAAAAAGAFEAAFAMTVPPAQVAANRTQLQTL 120 Query 123 IATNFFGQNTAAIAALETQYAEMWEQDATAMYDYAATSAAARTLTPFTSPQQDTNSAGLP 182 +ATN GQNT AIAA E Y EMW QDA AMY YA SAAA TLT FT P Q T+ +GL Sbjct 121 VATNLLGQNTPAIAATEAAYGEMWAQDAAAMYGYAVGSAAASTLTQFTQPAQTTDPSGLA 180 Query 183 AQSAEVSRATANAGAADGNWLGNLLE-EIGILLLPIAPELTPFFL-EAGEIVNAIPFPSI 240 +QSA V++A G+ +GNL + E+ L+ + L A ++AIP + Sbjct 181 SQSAAVTQAV-------GSTVGNLTQTELPQLMSAVPASLQGLASPAAASPIDAIPGSGL 233 Query 241 VGDEFCLLDG-------------LLAWYATIGSINNINSMGTGIIGAEKNLGILPELGSA 287 + LDG L+ + + G ++ +G I A ++ + LG+ Sbjct 234 LAALLNFLDGNDGNPYGVFLNSSLVNGFVSAGYVSPA-VVGPAIWAAMADINAV-ALGAQ 291 Query 288 AAAAAPP--PADIAPAFLAPLTSMAKSLS-------DGALRGPGEVSAAMRGAGTIGQMS 338 +AA PP + P+++ P S A S A G G +SA M A +G+MS Sbjct 292 ESAAVPPMGSGEGNPSWI-PAASPASPESLPVLGEETAATLGTGGISAGMNQAELVGRMS 350 Query 339 VPPAW 343 VP +W Sbjct 351 VPQSW 355 >gi|57116920|ref|YP_177653.1| PPE family protein [Mycobacterium tuberculosis H37Rv] gi|38684069|emb|CAE55432.1| PPE FAMILY PROTEIN [Mycobacterium tuberculosis H37Rv] Length=399 Score = 192 bits (487), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 180/429 (42%), Positives = 228/429 (54%), Gaps = 55/429 (12%) Query 3 MDFAMLPPEVNSTRMYSGPGAGSLWAAAAAWDQVSAELQSAAETYRSVIASLTGWQWLGP 62 +DFA LPPE+NS RMYSG G+ + AAA+AW +SAEL+++A +Y SV+++LTG +W GP Sbjct 1 LDFATLPPEINSARMYSGAGSAPMLAAASAWHGLSAELRASALSYSSVLSTLTGEEWHGP 60 Query 63 SSVRMGAAVTPYVEWLTTTAAQARQTATQITAAATGFEQAFAMTVPPPAIMANRAQVLSL 122 +S M AA PYV W++ TA +A Q Q AAA +E AFA TVPPP I ANRAQ+++L Sbjct 61 ASASMTAAAAPYVAWMSVTAVRAEQAGAQAEAAAAAYEAAFAATVPPPVIEANRAQLMAL 120 Query 123 IATNFFGQNTAAIAALETQYAEMWEQDATAMYDYAATSAAARTLTPFTSPQQDTNSAGLP 182 IATN GQN AIAA E QYAEMW QDA AMY YA SAAA LTPFT P Q TN++GL Sbjct 121 IATNVLGQNAPAIAATEAQYAEMWSQDAMAMYGYAGASAAATQLTPFTEPVQTTNASGLA 180 Query 183 AQSAEVSRATANAGAADGNWLGNLLEEIGILLLPIAPELTPFFLEAGEIVNAIPFPS--- 239 AQSA ++ AT + A L L+ I P L+ A F S Sbjct 181 AQSAAIAHATGASAGAQQTTLSQLIAAI------------PSVLQGLSSSTAATFASGPS 228 Query 240 ----IVGDEFCLLDGLLAWYATIGSINNINSMGTGIIGAEKN-----LGIL--------- 281 IVG LD L W + N N++ + + N LG+L Sbjct 229 GLLGIVGSGSSWLDKL--WALLDPNSNFWNTIASSGLFLPSNTIAPFLGLLGGVAAADAA 286 Query 282 -PELGSAAAAAAPPPADIAPAFLAPLTSMAKSLSDGALRGPGEVSAAMRGAGTIGQMSVP 340 LG A + + A +APL S G L G V+A + A T+G +SVP Sbjct 287 GDVLGEATS------GGLGGALVAPLG------SAGGLG--GTVAAGLGNAATVGTLSVP 332 Query 341 PAWKAPAVTTV---RAFDATPMTTLPGGDAPAAGVPGLPGMPASGAGRAGVVPRYGVRLT 397 P+W A A A TPM P A AAG+PG+P G G VP+YG R Sbjct 333 PSWTAAAPLASPLGSALGGTPMVAPP--PAVAAGMPGMPFGTMGGQGFGRAVPQYGFRPN 390 Query 398 VMTRPLSGG 406 + RP + G Sbjct 391 FVARPPAAG 399 >gi|148661613|ref|YP_001283136.1| PPE family protein [Mycobacterium tuberculosis H37Ra] gi|167967398|ref|ZP_02549675.1| PPE family protein [Mycobacterium tuberculosis H37Ra] gi|307084422|ref|ZP_07493535.1| PPE family protein [Mycobacterium tuberculosis SUMu012] gi|7478807|pir||H70931 probable PPE protein - Mycobacterium tuberculosis (strain H37RV) gi|148505765|gb|ABQ73574.1| PPE family protein [Mycobacterium tuberculosis H37Ra] gi|308365982|gb|EFP54833.1| PPE family protein [Mycobacterium tuberculosis SUMu012] Length=403 Score = 191 bits (486), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 180/429 (42%), Positives = 228/429 (54%), Gaps = 55/429 (12%) Query 3 MDFAMLPPEVNSTRMYSGPGAGSLWAAAAAWDQVSAELQSAAETYRSVIASLTGWQWLGP 62 +DFA LPPE+NS RMYSG G+ + AAA+AW +SAEL+++A +Y SV+++LTG +W GP Sbjct 5 LDFATLPPEINSARMYSGAGSAPMLAAASAWHGLSAELRASALSYSSVLSTLTGEEWHGP 64 Query 63 SSVRMGAAVTPYVEWLTTTAAQARQTATQITAAATGFEQAFAMTVPPPAIMANRAQVLSL 122 +S M AA PYV W++ TA +A Q Q AAA +E AFA TVPPP I ANRAQ+++L Sbjct 65 ASASMTAAAAPYVAWMSVTAVRAEQAGAQAEAAAAAYEAAFAATVPPPVIEANRAQLMAL 124 Query 123 IATNFFGQNTAAIAALETQYAEMWEQDATAMYDYAATSAAARTLTPFTSPQQDTNSAGLP 182 IATN GQN AIAA E QYAEMW QDA AMY YA SAAA LTPFT P Q TN++GL Sbjct 125 IATNVLGQNAPAIAATEAQYAEMWSQDAMAMYGYAGASAAATQLTPFTEPVQTTNASGLA 184 Query 183 AQSAEVSRATANAGAADGNWLGNLLEEIGILLLPIAPELTPFFLEAGEIVNAIPFPS--- 239 AQSA ++ AT + A L L+ I P L+ A F S Sbjct 185 AQSAAIAHATGASAGAQQTTLSQLIAAI------------PSVLQGLSSSTAATFASGPS 232 Query 240 ----IVGDEFCLLDGLLAWYATIGSINNINSMGTGIIGAEKN-----LGIL--------- 281 IVG LD L W + N N++ + + N LG+L Sbjct 233 GLLGIVGSGSSWLDKL--WALLDPNSNFWNTIASSGLFLPSNTIAPFLGLLGGVAAADAA 290 Query 282 -PELGSAAAAAAPPPADIAPAFLAPLTSMAKSLSDGALRGPGEVSAAMRGAGTIGQMSVP 340 LG A + + A +APL S G L G V+A + A T+G +SVP Sbjct 291 GDVLGEATS------GGLGGALVAPLG------SAGGLG--GTVAAGLGNAATVGTLSVP 336 Query 341 PAWKAPAVTTV---RAFDATPMTTLPGGDAPAAGVPGLPGMPASGAGRAGVVPRYGVRLT 397 P+W A A A TPM P A AAG+PG+P G G VP+YG R Sbjct 337 PSWTAAAPLASPLGSALGGTPMVAPP--PAVAAGMPGMPFGTMGGQGFGRAVPQYGFRPN 394 Query 398 VMTRPLSGG 406 + RP + G Sbjct 395 FVARPPAAG 403 >gi|289574372|ref|ZP_06454599.1| PPE family protein [Mycobacterium tuberculosis K85] gi|289538803|gb|EFD43381.1| PPE family protein [Mycobacterium tuberculosis K85] Length=384 Score = 191 bits (484), Expect = 3e-46, Method: Compositional matrix adjust. Identities = 160/414 (39%), Positives = 212/414 (52%), Gaps = 48/414 (11%) Query 3 MDFAMLPPEVNSTRMYSGPGAGSLWAAAAAWDQVSAELQSAAETYRSVIASLTGWQWLGP 62 MDF LPPEVNS RMY GPG+ + AAA+AW+ ++AEL AA Y VI +L +WLGP Sbjct 1 MDFGALPPEVNSGRMYCGPGSAPMVAAASAWNGLAAELSVAAVGYERVITTLQTEEWLGP 60 Query 63 SSVRMGAAVTPYVEWLTTTAAQARQTATQITAAATGFEQAFAMTVPPPAIMANRAQVLSL 122 +S M AV PYV W+ TA QA Q A+Q AAA +E AFA VPPP I ANRA++ SL Sbjct 61 ASTLMVEAVAPYVAWMRATAIQAEQAASQARAAAAAYETAFAAIVPPPLIAANRARLTSL 120 Query 123 IATNFFGQNTAAIAALETQYAEMWEQDATAMYDYAATSAAARTLTPFTSPQQDTNSAGLP 182 + N FGQNTA+IAA E QYAEMW QDA AMY YA +SA A +TPF P T+ + Sbjct 121 VTHNVFGQNTASIAATEAQYAEMWAQDAMAMYGYAGSSATATKVTPFAPPPNTTSPSAAA 180 Query 183 AQSAEVSRATANAGAADGNWLGNLLEEIGILLLPIAPELTPFFLEAGEIVNAIPFPSIVG 242 Q + V++A + A + + L+ + LL + L+ A A P Sbjct 181 TQLSAVAKAAGTSAGAAQSAIAELIAHLPNTLLGLTSPLSSALTAA-----ATP------ 229 Query 243 DEFCLLDGLLAWYATIGSI--NNIN------SMGTGIIGAEKNLGILPELGSAAAAAAPP 294 L+ + WY I + N + +G +I + + LG + G + AA Sbjct 230 ---GWLEWFINWYLPISQLFYNTVGLPYFAIGIGNSLITSWRALGWIGSRGRRSCRAARR 286 Query 295 PADIAPAFLAPLTSMAKSLSDGALRGPGEVSAAMRGAGTIGQMSVPPAWK------APAV 348 P + G G VSA + A TIG++SVPP W AP V Sbjct 287 P-------------------SARVCGTGPVSAGLGNAATIGKLSVPPNWAGASPSLAPTV 327 Query 349 TTVRAFDATPMTTLPGGDAPAAGVPGLPGMPASGAGRAGVVPRYGVRLTVMTRP 402 + A + + P A + G+P + SG G G PRYG R+TVM+RP Sbjct 328 GSASAPLVSDIVEQPEAGAAGNLLGGMP-LAGSGTGTGGAGPRYGFRVTVMSRP 380 >gi|289759264|ref|ZP_06518642.1| PPE family protein [Mycobacterium tuberculosis T85] gi|289714828|gb|EFD78840.1| PPE family protein [Mycobacterium tuberculosis T85] gi|326902641|gb|EGE49574.1| PPE family protein [Mycobacterium tuberculosis W-148] gi|339295969|gb|AEJ48080.1| PPE family protein [Mycobacterium tuberculosis CCDC5079] gi|339299578|gb|AEJ51688.1| PPE family protein [Mycobacterium tuberculosis CCDC5180] Length=262 Score = 190 bits (483), Expect = 3e-46, Method: Compositional matrix adjust. Identities = 128/193 (67%), Positives = 147/193 (77%), Gaps = 0/193 (0%) Query 3 MDFAMLPPEVNSTRMYSGPGAGSLWAAAAAWDQVSAELQSAAETYRSVIASLTGWQWLGP 62 MD+A LPPE+NS RMYSGPG S+ AAA+WD ++AEL SAAE Y SVIA LTG W GP Sbjct 1 MDYAFLPPEINSARMYSGPGPNSMLVAAASWDALAAELASAAENYGSVIARLTGMHWWGP 60 Query 63 SSVRMGAAVTPYVEWLTTTAAQARQTATQITAAATGFEQAFAMTVPPPAIMANRAQVLSL 122 +S M A PYVEWL TAAQ +QTATQ AAA FEQA AMTVPP + ANRA++ +L Sbjct 61 ASTSMLAMSAPYVEWLERTAAQTKQTATQARAAAAAFEQAHAMTVPPALVTANRAELKAL 120 Query 123 IATNFFGQNTAAIAALETQYAEMWEQDATAMYDYAATSAAARTLTPFTSPQQDTNSAGLP 182 IA+N GQNTAAIAA+E QYAEMW QDA AMY YA TSAAAR LTPF+SPQQ TN AGL Sbjct 121 IASNLLGQNTAAIAAIEAQYAEMWAQDAAAMYGYATTSAAARQLTPFSSPQQTTNPAGLA 180 Query 183 AQSAEVSRATANA 195 AQ+A V++A N+ Sbjct 181 AQNAAVTQAATNS 193 Lambda K H 0.315 0.129 0.385 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 807118285248 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40