BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv3533c Length=582 Score E Sequences producing significant alignments: (Bits) Value gi|15843145|ref|NP_338182.1| PPE family protein [Mycobacterium t... 1046 0.0 gi|289440962|ref|ZP_06430706.1| PPE family protein [Mycobacteriu... 1043 0.0 gi|340628497|ref|YP_004746949.1| PPE family protein [Mycobacteri... 1036 0.0 gi|308232494|ref|ZP_07416222.2| PPE family protein [Mycobacteriu... 970 0.0 gi|306801159|ref|ZP_07437827.1| putative PPE family protein [Myc... 919 0.0 gi|167969147|ref|ZP_02551424.1| PPE family protein [Mycobacteriu... 916 0.0 gi|308378364|ref|ZP_07482324.2| putative PPE family protein [Myc... 879 0.0 gi|306778415|ref|ZP_07416752.1| PPE family protein [Mycobacteriu... 870 0.0 gi|289763711|ref|ZP_06523089.1| PPE family protein [Mycobacteriu... 870 0.0 gi|323717806|gb|EGB27003.1| PPE family protein [Mycobacterium tu... 869 0.0 gi|289555798|ref|ZP_06445008.1| PPE family protein [Mycobacteriu... 861 0.0 gi|306974002|ref|ZP_07486663.1| hypothetical protein TMJG_00778 ... 858 0.0 gi|306790802|ref|ZP_07429124.1| hypothetical protein TMDG_01263 ... 845 0.0 gi|307081712|ref|ZP_07490882.1| hypothetical protein TMKG_00770 ... 840 0.0 gi|306791127|ref|ZP_07429429.1| putative PPE family protein [Myc... 818 0.0 gi|254366098|ref|ZP_04982142.1| PPE family protein [Mycobacteriu... 814 0.0 gi|289445125|ref|ZP_06434869.1| PPE family protein [Mycobacteriu... 745 0.0 gi|289759689|ref|ZP_06519067.1| predicted protein [Mycobacterium... 742 0.0 gi|289747370|ref|ZP_06506748.1| PPE family protein [Mycobacteriu... 534 1e-149 gi|183981484|ref|YP_001849775.1| PPE family protein [Mycobacteri... 473 3e-131 gi|240171043|ref|ZP_04749702.1| PPE family protein [Mycobacteriu... 471 2e-130 gi|240170430|ref|ZP_04749089.1| PPE family protein [Mycobacteriu... 468 2e-129 gi|340625774|ref|YP_004744226.1| PPE family protein [Mycobacteri... 463 4e-128 gi|240173028|ref|ZP_04751686.1| PPE family protein [Mycobacteriu... 453 4e-125 gi|183981566|ref|YP_001849857.1| PPE family protein [Mycobacteri... 452 9e-125 gi|118616670|ref|YP_905002.1| PPE family protein [Mycobacterium ... 452 1e-124 gi|183981425|ref|YP_001849716.1| PPE family protein [Mycobacteri... 451 1e-124 gi|240169655|ref|ZP_04748314.1| PPE family protein [Mycobacteriu... 444 2e-122 gi|297634116|ref|ZP_06951896.1| PPE family protein [Mycobacteriu... 441 2e-121 gi|308378968|ref|ZP_07484506.2| PPE family protein [Mycobacteriu... 441 2e-121 gi|57116882|ref|YP_177817.1| PPE family protein [Mycobacterium t... 441 2e-121 gi|121637470|ref|YP_977693.1| PPE family protein [Mycobacterium ... 440 3e-121 gi|323719996|gb|EGB29108.1| PPE family protein [Mycobacterium tu... 440 3e-121 gi|15841015|ref|NP_336052.1| PPE family protein [Mycobacterium t... 440 3e-121 gi|254550567|ref|ZP_05141014.1| PPE family protein [Mycobacteriu... 440 3e-121 gi|306775737|ref|ZP_07414074.1| PPE family protein [Mycobacteriu... 440 3e-121 gi|183981160|ref|YP_001849451.1| PPE family protein [Mycobacteri... 440 4e-121 gi|308373181|ref|ZP_07431301.2| PPE family protein [Mycobacteriu... 439 5e-121 gi|306779561|ref|ZP_07417898.1| PPE family protein [Mycobacteriu... 439 6e-121 gi|340626569|ref|YP_004745021.1| PPE family protein [Mycobacteri... 439 8e-121 gi|183985299|ref|YP_001853590.1| PPE family protein [Mycobacteri... 438 1e-120 gi|254364419|ref|ZP_04980465.1| PPE family protein [Mycobacteriu... 436 6e-120 gi|183981319|ref|YP_001849610.1| PPE family protein [Mycobacteri... 435 1e-119 gi|183984524|ref|YP_001852815.1| PPE family protein [Mycobacteri... 433 3e-119 gi|289568706|ref|ZP_06448933.1| PPE family protein [Mycobacteriu... 429 5e-118 gi|31792734|ref|NP_855227.1| PPE family protein [Mycobacterium b... 428 2e-117 gi|289442157|ref|ZP_06431901.1| predicted protein [Mycobacterium... 427 2e-117 gi|183983645|ref|YP_001851936.1| PPE family protein [Mycobacteri... 426 7e-117 gi|298526633|ref|ZP_07014042.1| predicted protein [Mycobacterium... 424 2e-116 gi|15842735|ref|NP_337772.1| PPE family protein [Mycobacterium t... 424 2e-116 >gi|15843145|ref|NP_338182.1| PPE family protein [Mycobacterium tuberculosis CDC1551] gi|31794709|ref|NP_857202.1| PPE family protein [Mycobacterium bovis AF2122/97] gi|57117121|ref|YP_177985.1| PPE family protein [Mycobacterium tuberculosis H37Rv] 41 more sequence titles Length=582 Score = 1046 bits (2704), Expect = 0.0, Method: Compositional matrix adjust. Identities = 582/582 (100%), Positives = 582/582 (100%), Gaps = 0/582 (0%) Query 1 MNYAVLPPELNSLRMFTGAGSAPMLAAAVAWDGLAAELGSAASSFGSVTSDLASQAWQGP 60 MNYAVLPPELNSLRMFTGAGSAPMLAAAVAWDGLAAELGSAASSFGSVTSDLASQAWQGP Sbjct 1 MNYAVLPPELNSLRMFTGAGSAPMLAAAVAWDGLAAELGSAASSFGSVTSDLASQAWQGP 60 Query 61 AAAAMAAAAAPYAGWLSAAAARAAGAAAQAKAVASAFEAARAATVHPLLVAANRNAFAQL 120 AAAAMAAAAAPYAGWLSAAAARAAGAAAQAKAVASAFEAARAATVHPLLVAANRNAFAQL Sbjct 61 AAAAMAAAAAPYAGWLSAAAARAAGAAAQAKAVASAFEAARAATVHPLLVAANRNAFAQL 120 Query 121 VMSNWFGLNAPLIAAVEGAYEQMWAADVAAMVGYHSGASAAAEQLVPFQQALQQLPNLGI 180 VMSNWFGLNAPLIAAVEGAYEQMWAADVAAMVGYHSGASAAAEQLVPFQQALQQLPNLGI Sbjct 121 VMSNWFGLNAPLIAAVEGAYEQMWAADVAAMVGYHSGASAAAEQLVPFQQALQQLPNLGI 180 Query 181 GNIGNANLGGGNTGDLNTGNGNIGNTNLGSGNRGDANLGSGNIGNSNVGGGNVGNGNFGS 240 GNIGNANLGGGNTGDLNTGNGNIGNTNLGSGNRGDANLGSGNIGNSNVGGGNVGNGNFGS Sbjct 181 GNIGNANLGGGNTGDLNTGNGNIGNTNLGSGNRGDANLGSGNIGNSNVGGGNVGNGNFGS 240 Query 241 GNGRAGLPGSGNVGNGNLGNSNLGSGNTGNSNVGFGNTGNNNVGTGNAGSGNIGAGNTGS 300 GNGRAGLPGSGNVGNGNLGNSNLGSGNTGNSNVGFGNTGNNNVGTGNAGSGNIGAGNTGS Sbjct 241 GNGRAGLPGSGNVGNGNLGNSNLGSGNTGNSNVGFGNTGNNNVGTGNAGSGNIGAGNTGS 300 Query 301 SNWGFGNNGIGNIGFGNTGNGNIGFGLTGNNQVGIGGLNSGSGNIGLFNSGTNNVGFFNS 360 SNWGFGNNGIGNIGFGNTGNGNIGFGLTGNNQVGIGGLNSGSGNIGLFNSGTNNVGFFNS Sbjct 301 SNWGFGNNGIGNIGFGNTGNGNIGFGLTGNNQVGIGGLNSGSGNIGLFNSGTNNVGFFNS 360 Query 361 GNGNLGIGNSSDANVGIGNSGATVGPFVAGHNTGFGNSGSLNTGMGNAGGVNTGFGNGGA 420 GNGNLGIGNSSDANVGIGNSGATVGPFVAGHNTGFGNSGSLNTGMGNAGGVNTGFGNGGA Sbjct 361 GNGNLGIGNSSDANVGIGNSGATVGPFVAGHNTGFGNSGSLNTGMGNAGGVNTGFGNGGA 420 Query 421 INLGFGNSGQLNAGSFNAGSINTGNFNSGQGNTGDFNAGVRNTGWSNSGLTNTGAFNAGS 480 INLGFGNSGQLNAGSFNAGSINTGNFNSGQGNTGDFNAGVRNTGWSNSGLTNTGAFNAGS Sbjct 421 INLGFGNSGQLNAGSFNAGSINTGNFNSGQGNTGDFNAGVRNTGWSNSGLTNTGAFNAGS 480 Query 481 LNTGFGAVGTGSGPNSGFGNAGTNNSGFFNTGVGSSGFQNGGSNNSGLQNAVGTVIAAGF 540 LNTGFGAVGTGSGPNSGFGNAGTNNSGFFNTGVGSSGFQNGGSNNSGLQNAVGTVIAAGF Sbjct 481 LNTGFGAVGTGSGPNSGFGNAGTNNSGFFNTGVGSSGFQNGGSNNSGLQNAVGTVIAAGF 540 Query 541 GNTGAQTVGIANSGVLNSGFFNSGVHNSGGFNSENQRSGFGN 582 GNTGAQTVGIANSGVLNSGFFNSGVHNSGGFNSENQRSGFGN Sbjct 541 GNTGAQTVGIANSGVLNSGFFNSGVHNSGGFNSENQRSGFGN 582 >gi|289440962|ref|ZP_06430706.1| PPE family protein [Mycobacterium tuberculosis T46] gi|289571774|ref|ZP_06452001.1| PPE family protein [Mycobacterium tuberculosis T17] gi|289413881|gb|EFD11121.1| PPE family protein [Mycobacterium tuberculosis T46] gi|289545528|gb|EFD49176.1| PPE family protein [Mycobacterium tuberculosis T17] Length=582 Score = 1043 bits (2697), Expect = 0.0, Method: Compositional matrix adjust. Identities = 581/582 (99%), Positives = 581/582 (99%), Gaps = 0/582 (0%) Query 1 MNYAVLPPELNSLRMFTGAGSAPMLAAAVAWDGLAAELGSAASSFGSVTSDLASQAWQGP 60 MNYAVLPPELNSLRMFTGAGSAPMLAAAVAWDGLAAELGSAASSFGSVTSDLASQAWQGP Sbjct 1 MNYAVLPPELNSLRMFTGAGSAPMLAAAVAWDGLAAELGSAASSFGSVTSDLASQAWQGP 60 Query 61 AAAAMAAAAAPYAGWLSAAAARAAGAAAQAKAVASAFEAARAATVHPLLVAANRNAFAQL 120 AAAAMAAAAAPYAGWLSAAAARAAGAAAQAKAVASAFEAARAATVHPLLVAANRNAFAQL Sbjct 61 AAAAMAAAAAPYAGWLSAAAARAAGAAAQAKAVASAFEAARAATVHPLLVAANRNAFAQL 120 Query 121 VMSNWFGLNAPLIAAVEGAYEQMWAADVAAMVGYHSGASAAAEQLVPFQQALQQLPNLGI 180 VMSNWFGLNAPLIAAVEGAYEQMWAADVAAMVGYHSGASAAAEQLVPFQQALQQLPNLGI Sbjct 121 VMSNWFGLNAPLIAAVEGAYEQMWAADVAAMVGYHSGASAAAEQLVPFQQALQQLPNLGI 180 Query 181 GNIGNANLGGGNTGDLNTGNGNIGNTNLGSGNRGDANLGSGNIGNSNVGGGNVGNGNFGS 240 GNIGNANLGGGNTGDLNTGNGNIGNTNLGSGNRGDANLGSGNIGNSNVGGGNVGNGNFGS Sbjct 181 GNIGNANLGGGNTGDLNTGNGNIGNTNLGSGNRGDANLGSGNIGNSNVGGGNVGNGNFGS 240 Query 241 GNGRAGLPGSGNVGNGNLGNSNLGSGNTGNSNVGFGNTGNNNVGTGNAGSGNIGAGNTGS 300 GNGRAGLPGSGNVGNGNLGNSNLGSGNTGNSNVGFGNTGNNNVGTGNAGSGNIGAGNTGS Sbjct 241 GNGRAGLPGSGNVGNGNLGNSNLGSGNTGNSNVGFGNTGNNNVGTGNAGSGNIGAGNTGS 300 Query 301 SNWGFGNNGIGNIGFGNTGNGNIGFGLTGNNQVGIGGLNSGSGNIGLFNSGTNNVGFFNS 360 SNWGFGNNGIGNIGFGNTGNGNIGFGLTGNNQVGIGGLNSGSGNIGLFNSGTNNVGFFNS Sbjct 301 SNWGFGNNGIGNIGFGNTGNGNIGFGLTGNNQVGIGGLNSGSGNIGLFNSGTNNVGFFNS 360 Query 361 GNGNLGIGNSSDANVGIGNSGATVGPFVAGHNTGFGNSGSLNTGMGNAGGVNTGFGNGGA 420 GNGNLGIGNSSDANVGIGNSGATVGPFVAGHNTGFGNSGSLNTGMGNAGGVNTGFGNGGA Sbjct 361 GNGNLGIGNSSDANVGIGNSGATVGPFVAGHNTGFGNSGSLNTGMGNAGGVNTGFGNGGA 420 Query 421 INLGFGNSGQLNAGSFNAGSINTGNFNSGQGNTGDFNAGVRNTGWSNSGLTNTGAFNAGS 480 INLGFGNSGQLNAGSFNAGSINTGNFNSGQGNTGDFNAGVRNTGWSNSGLTNTGAFNAGS Sbjct 421 INLGFGNSGQLNAGSFNAGSINTGNFNSGQGNTGDFNAGVRNTGWSNSGLTNTGAFNAGS 480 Query 481 LNTGFGAVGTGSGPNSGFGNAGTNNSGFFNTGVGSSGFQNGGSNNSGLQNAVGTVIAAGF 540 LNTGFGAVGTGSGPNSGFGNAGTNNSGFFNTGVGSSGFQNGGSNNSGLQNAVGTVIAAGF Sbjct 481 LNTGFGAVGTGSGPNSGFGNAGTNNSGFFNTGVGSSGFQNGGSNNSGLQNAVGTVIAAGF 540 Query 541 GNTGAQTVGIANSGVLNSGFFNSGVHNSGGFNSENQRSGFGN 582 GNTGAQTVGIANSGVLNSGFFNS VHNSGGFNSENQRSGFGN Sbjct 541 GNTGAQTVGIANSGVLNSGFFNSSVHNSGGFNSENQRSGFGN 582 >gi|340628497|ref|YP_004746949.1| PPE family protein [Mycobacterium canettii CIPT 140010059] gi|340006687|emb|CCC45875.1| PPE family protein [Mycobacterium canettii CIPT 140010059] Length=582 Score = 1036 bits (2680), Expect = 0.0, Method: Compositional matrix adjust. Identities = 577/582 (99%), Positives = 579/582 (99%), Gaps = 0/582 (0%) Query 1 MNYAVLPPELNSLRMFTGAGSAPMLAAAVAWDGLAAELGSAASSFGSVTSDLASQAWQGP 60 MNYAVLPPELNSLRMFTGAGSAPMLAAAVAWDGLAAELGSAASSFGSVTS LASQAWQGP Sbjct 1 MNYAVLPPELNSLRMFTGAGSAPMLAAAVAWDGLAAELGSAASSFGSVTSSLASQAWQGP 60 Query 61 AAAAMAAAAAPYAGWLSAAAARAAGAAAQAKAVASAFEAARAATVHPLLVAANRNAFAQL 120 AAAAMAAAAAPYAGWLSAAAARAAGAAAQAKAVASAFEAARAATVHPL+VAANR+AFAQL Sbjct 61 AAAAMAAAAAPYAGWLSAAAARAAGAAAQAKAVASAFEAARAATVHPLVVAANRSAFAQL 120 Query 121 VMSNWFGLNAPLIAAVEGAYEQMWAADVAAMVGYHSGASAAAEQLVPFQQALQQLPNLGI 180 VMSNWFGLNAPLIAAVEGAYEQMWAADVAAMVGYHSGASAAAEQLVPFQQALQQLPNLGI Sbjct 121 VMSNWFGLNAPLIAAVEGAYEQMWAADVAAMVGYHSGASAAAEQLVPFQQALQQLPNLGI 180 Query 181 GNIGNANLGGGNTGDLNTGNGNIGNTNLGSGNRGDANLGSGNIGNSNVGGGNVGNGNFGS 240 GNIGNANLGGGNTGDLNTGNGNIGNTNLGSGNRGDANLGSGNIGNSNVGGGN GNGNFGS Sbjct 181 GNIGNANLGGGNTGDLNTGNGNIGNTNLGSGNRGDANLGSGNIGNSNVGGGNFGNGNFGS 240 Query 241 GNGRAGLPGSGNVGNGNLGNSNLGSGNTGNSNVGFGNTGNNNVGTGNAGSGNIGAGNTGS 300 GNGRAGLPGSGNVGNGNLGNSNLGSGNTGNSNVGFGNTGNNNVGTGNAGSGNIGAGNTGS Sbjct 241 GNGRAGLPGSGNVGNGNLGNSNLGSGNTGNSNVGFGNTGNNNVGTGNAGSGNIGAGNTGS 300 Query 301 SNWGFGNNGIGNIGFGNTGNGNIGFGLTGNNQVGIGGLNSGSGNIGLFNSGTNNVGFFNS 360 SNWGFGNNGIGNIGFGNTGNGNIGFGLTGNNQVGIGGLNSGSGNIGLFNSGTNNVGFFNS Sbjct 301 SNWGFGNNGIGNIGFGNTGNGNIGFGLTGNNQVGIGGLNSGSGNIGLFNSGTNNVGFFNS 360 Query 361 GNGNLGIGNSSDANVGIGNSGATVGPFVAGHNTGFGNSGSLNTGMGNAGGVNTGFGNGGA 420 GNGNLGIGNSSDANVGIGNSGATVGPFVAGHNTGFGNSGSLNTGMGNAGGVNTGFGNGGA Sbjct 361 GNGNLGIGNSSDANVGIGNSGATVGPFVAGHNTGFGNSGSLNTGMGNAGGVNTGFGNGGA 420 Query 421 INLGFGNSGQLNAGSFNAGSINTGNFNSGQGNTGDFNAGVRNTGWSNSGLTNTGAFNAGS 480 INLGFGNSGQLNAGSFNAGSINTGNFNSGQGNTGDFNAGVRNTGWSNSGLTNTGAFNAGS Sbjct 421 INLGFGNSGQLNAGSFNAGSINTGNFNSGQGNTGDFNAGVRNTGWSNSGLTNTGAFNAGS 480 Query 481 LNTGFGAVGTGSGPNSGFGNAGTNNSGFFNTGVGSSGFQNGGSNNSGLQNAVGTVIAAGF 540 LNTGFGAVGTG GPNSGFGNAGTNNSGFFNTGVGSSGFQNGGSNNSGLQNAVGTVIAAGF Sbjct 481 LNTGFGAVGTGPGPNSGFGNAGTNNSGFFNTGVGSSGFQNGGSNNSGLQNAVGTVIAAGF 540 Query 541 GNTGAQTVGIANSGVLNSGFFNSGVHNSGGFNSENQRSGFGN 582 GNTGAQTVGIANSGVLNSGFFNSGVHNSGGFNSENQRSGFGN Sbjct 541 GNTGAQTVGIANSGVLNSGFFNSGVHNSGGFNSENQRSGFGN 582 >gi|308232494|ref|ZP_07416222.2| PPE family protein [Mycobacterium tuberculosis SUMu001] gi|308213760|gb|EFO73159.1| PPE family protein [Mycobacterium tuberculosis SUMu001] Length=580 Score = 970 bits (2507), Expect = 0.0, Method: Compositional matrix adjust. Identities = 549/577 (96%), Positives = 551/577 (96%), Gaps = 6/577 (1%) Query 12 SLRMFTGAGSAPMLAAAVAWD------GLAAELGSAASSFGSVTSDLASQAWQGPAAAAM 65 R G + + W G LGSAASSFGSVTSDLASQAWQGPAAAAM Sbjct 4 CRRSLIRCGCSRVQVRRRCWRRRWPGTGWPQSLGSAASSFGSVTSDLASQAWQGPAAAAM 63 Query 66 AAAAAPYAGWLSAAAARAAGAAAQAKAVASAFEAARAATVHPLLVAANRNAFAQLVMSNW 125 AAAAAPYAGWLSAAAARAAGAAAQAKAVASAFEAARAATVHPLLVAANRNAFAQLVMSNW Sbjct 64 AAAAAPYAGWLSAAAARAAGAAAQAKAVASAFEAARAATVHPLLVAANRNAFAQLVMSNW 123 Query 126 FGLNAPLIAAVEGAYEQMWAADVAAMVGYHSGASAAAEQLVPFQQALQQLPNLGIGNIGN 185 FGLNAPLIAAVEGAYEQMWAADVAAMVGYHSGASAAAEQLVPFQQALQQLPNLGIGNIGN Sbjct 124 FGLNAPLIAAVEGAYEQMWAADVAAMVGYHSGASAAAEQLVPFQQALQQLPNLGIGNIGN 183 Query 186 ANLGGGNTGDLNTGNGNIGNTNLGSGNRGDANLGSGNIGNSNVGGGNVGNGNFGSGNGRA 245 ANLGGGNTGDLNTGNGNIGNTNLGSGNRGDANLGSGNIGNSNVGGGNVGNGNFGSGNGRA Sbjct 184 ANLGGGNTGDLNTGNGNIGNTNLGSGNRGDANLGSGNIGNSNVGGGNVGNGNFGSGNGRA 243 Query 246 GLPGSGNVGNGNLGNSNLGSGNTGNSNVGFGNTGNNNVGTGNAGSGNIGAGNTGSSNWGF 305 GLPGSGNVGNGNLGNSNLGSGNTGNSNVGFGNTGNNNVGTGNAGSGNIGAGNTGSSNWGF Sbjct 244 GLPGSGNVGNGNLGNSNLGSGNTGNSNVGFGNTGNNNVGTGNAGSGNIGAGNTGSSNWGF 303 Query 306 GNNGIGNIGFGNTGNGNIGFGLTGNNQVGIGGLNSGSGNIGLFNSGTNNVGFFNSGNGNL 365 GNNGIGNIGFGNTGNGNIGFGLTGNNQVGIGGLNSGSGNIGLFNSGTNNVGFFNSGNGNL Sbjct 304 GNNGIGNIGFGNTGNGNIGFGLTGNNQVGIGGLNSGSGNIGLFNSGTNNVGFFNSGNGNL 363 Query 366 GIGNSSDANVGIGNSGATVGPFVAGHNTGFGNSGSLNTGMGNAGGVNTGFGNGGAINLGF 425 GIGNSSDANVGIGNSGATVGPFVAGHNTGFGNSGSLNTGMGNAGGVNTGFGNGGAINLGF Sbjct 364 GIGNSSDANVGIGNSGATVGPFVAGHNTGFGNSGSLNTGMGNAGGVNTGFGNGGAINLGF 423 Query 426 GNSGQLNAGSFNAGSINTGNFNSGQGNTGDFNAGVRNTGWSNSGLTNTGAFNAGSLNTGF 485 GNSGQLNAGSFNAGSINTGNFNSGQGNTGDFNAGVRNTGWSNSGLTNTGAFNAGSLNTGF Sbjct 424 GNSGQLNAGSFNAGSINTGNFNSGQGNTGDFNAGVRNTGWSNSGLTNTGAFNAGSLNTGF 483 Query 486 GAVGTGSGPNSGFGNAGTNNSGFFNTGVGSSGFQNGGSNNSGLQNAVGTVIAAGFGNTGA 545 GAVGTGSGPNSGFGNAGTNNSGFFNTGVGSSGFQNGGSNNSGLQNAVGTVIAAGFGNTGA Sbjct 484 GAVGTGSGPNSGFGNAGTNNSGFFNTGVGSSGFQNGGSNNSGLQNAVGTVIAAGFGNTGA 543 Query 546 QTVGIANSGVLNSGFFNSGVHNSGGFNSENQRSGFGN 582 QTVGIANSGVLNSGFFNSGVHNSGGFNSENQRSGFGN Sbjct 544 QTVGIANSGVLNSGFFNSGVHNSGGFNSENQRSGFGN 580 >gi|306801159|ref|ZP_07437827.1| putative PPE family protein [Mycobacterium tuberculosis SUMu008] gi|308352046|gb|EFP40897.1| putative PPE family protein [Mycobacterium tuberculosis SUMu008] Length=521 Score = 919 bits (2374), Expect = 0.0, Method: Compositional matrix adjust. Identities = 520/521 (99%), Positives = 520/521 (99%), Gaps = 0/521 (0%) Query 62 AAAMAAAAAPYAGWLSAAAARAAGAAAQAKAVASAFEAARAATVHPLLVAANRNAFAQLV 121 AAAM AAAAPYAGWLSAAAARAAGAAAQAKAVASAFEAARAATVHPLLVAANRNAFAQLV Sbjct 1 AAAMVAAAAPYAGWLSAAAARAAGAAAQAKAVASAFEAARAATVHPLLVAANRNAFAQLV 60 Query 122 MSNWFGLNAPLIAAVEGAYEQMWAADVAAMVGYHSGASAAAEQLVPFQQALQQLPNLGIG 181 MSNWFGLNAPLIAAVEGAYEQMWAADVAAMVGYHSGASAAAEQLVPFQQALQQLPNLGIG Sbjct 61 MSNWFGLNAPLIAAVEGAYEQMWAADVAAMVGYHSGASAAAEQLVPFQQALQQLPNLGIG 120 Query 182 NIGNANLGGGNTGDLNTGNGNIGNTNLGSGNRGDANLGSGNIGNSNVGGGNVGNGNFGSG 241 NIGNANLGGGNTGDLNTGNGNIGNTNLGSGNRGDANLGSGNIGNSNVGGGNVGNGNFGSG Sbjct 121 NIGNANLGGGNTGDLNTGNGNIGNTNLGSGNRGDANLGSGNIGNSNVGGGNVGNGNFGSG 180 Query 242 NGRAGLPGSGNVGNGNLGNSNLGSGNTGNSNVGFGNTGNNNVGTGNAGSGNIGAGNTGSS 301 NGRAGLPGSGNVGNGNLGNSNLGSGNTGNSNVGFGNTGNNNVGTGNAGSGNIGAGNTGSS Sbjct 181 NGRAGLPGSGNVGNGNLGNSNLGSGNTGNSNVGFGNTGNNNVGTGNAGSGNIGAGNTGSS 240 Query 302 NWGFGNNGIGNIGFGNTGNGNIGFGLTGNNQVGIGGLNSGSGNIGLFNSGTNNVGFFNSG 361 NWGFGNNGIGNIGFGNTGNGNIGFGLTGNNQVGIGGLNSGSGNIGLFNSGTNNVGFFNSG Sbjct 241 NWGFGNNGIGNIGFGNTGNGNIGFGLTGNNQVGIGGLNSGSGNIGLFNSGTNNVGFFNSG 300 Query 362 NGNLGIGNSSDANVGIGNSGATVGPFVAGHNTGFGNSGSLNTGMGNAGGVNTGFGNGGAI 421 NGNLGIGNSSDANVGIGNSGATVGPFVAGHNTGFGNSGSLNTGMGNAGGVNTGFGNGGAI Sbjct 301 NGNLGIGNSSDANVGIGNSGATVGPFVAGHNTGFGNSGSLNTGMGNAGGVNTGFGNGGAI 360 Query 422 NLGFGNSGQLNAGSFNAGSINTGNFNSGQGNTGDFNAGVRNTGWSNSGLTNTGAFNAGSL 481 NLGFGNSGQLNAGSFNAGSINTGNFNSGQGNTGDFNAGVRNTGWSNSGLTNTGAFNAGSL Sbjct 361 NLGFGNSGQLNAGSFNAGSINTGNFNSGQGNTGDFNAGVRNTGWSNSGLTNTGAFNAGSL 420 Query 482 NTGFGAVGTGSGPNSGFGNAGTNNSGFFNTGVGSSGFQNGGSNNSGLQNAVGTVIAAGFG 541 NTGFGAVGTGSGPNSGFGNAGTNNSGFFNTGVGSSGFQNGGSNNSGLQNAVGTVIAAGFG Sbjct 421 NTGFGAVGTGSGPNSGFGNAGTNNSGFFNTGVGSSGFQNGGSNNSGLQNAVGTVIAAGFG 480 Query 542 NTGAQTVGIANSGVLNSGFFNSGVHNSGGFNSENQRSGFGN 582 NTGAQTVGIANSGVLNSGFFNSGVHNSGGFNSENQRSGFGN Sbjct 481 NTGAQTVGIANSGVLNSGFFNSGVHNSGGFNSENQRSGFGN 521 >gi|167969147|ref|ZP_02551424.1| PPE family protein [Mycobacterium tuberculosis H37Ra] Length=518 Score = 916 bits (2367), Expect = 0.0, Method: Compositional matrix adjust. Identities = 518/518 (100%), Positives = 518/518 (100%), Gaps = 0/518 (0%) Query 65 MAAAAAPYAGWLSAAAARAAGAAAQAKAVASAFEAARAATVHPLLVAANRNAFAQLVMSN 124 MAAAAAPYAGWLSAAAARAAGAAAQAKAVASAFEAARAATVHPLLVAANRNAFAQLVMSN Sbjct 1 MAAAAAPYAGWLSAAAARAAGAAAQAKAVASAFEAARAATVHPLLVAANRNAFAQLVMSN 60 Query 125 WFGLNAPLIAAVEGAYEQMWAADVAAMVGYHSGASAAAEQLVPFQQALQQLPNLGIGNIG 184 WFGLNAPLIAAVEGAYEQMWAADVAAMVGYHSGASAAAEQLVPFQQALQQLPNLGIGNIG Sbjct 61 WFGLNAPLIAAVEGAYEQMWAADVAAMVGYHSGASAAAEQLVPFQQALQQLPNLGIGNIG 120 Query 185 NANLGGGNTGDLNTGNGNIGNTNLGSGNRGDANLGSGNIGNSNVGGGNVGNGNFGSGNGR 244 NANLGGGNTGDLNTGNGNIGNTNLGSGNRGDANLGSGNIGNSNVGGGNVGNGNFGSGNGR Sbjct 121 NANLGGGNTGDLNTGNGNIGNTNLGSGNRGDANLGSGNIGNSNVGGGNVGNGNFGSGNGR 180 Query 245 AGLPGSGNVGNGNLGNSNLGSGNTGNSNVGFGNTGNNNVGTGNAGSGNIGAGNTGSSNWG 304 AGLPGSGNVGNGNLGNSNLGSGNTGNSNVGFGNTGNNNVGTGNAGSGNIGAGNTGSSNWG Sbjct 181 AGLPGSGNVGNGNLGNSNLGSGNTGNSNVGFGNTGNNNVGTGNAGSGNIGAGNTGSSNWG 240 Query 305 FGNNGIGNIGFGNTGNGNIGFGLTGNNQVGIGGLNSGSGNIGLFNSGTNNVGFFNSGNGN 364 FGNNGIGNIGFGNTGNGNIGFGLTGNNQVGIGGLNSGSGNIGLFNSGTNNVGFFNSGNGN Sbjct 241 FGNNGIGNIGFGNTGNGNIGFGLTGNNQVGIGGLNSGSGNIGLFNSGTNNVGFFNSGNGN 300 Query 365 LGIGNSSDANVGIGNSGATVGPFVAGHNTGFGNSGSLNTGMGNAGGVNTGFGNGGAINLG 424 LGIGNSSDANVGIGNSGATVGPFVAGHNTGFGNSGSLNTGMGNAGGVNTGFGNGGAINLG Sbjct 301 LGIGNSSDANVGIGNSGATVGPFVAGHNTGFGNSGSLNTGMGNAGGVNTGFGNGGAINLG 360 Query 425 FGNSGQLNAGSFNAGSINTGNFNSGQGNTGDFNAGVRNTGWSNSGLTNTGAFNAGSLNTG 484 FGNSGQLNAGSFNAGSINTGNFNSGQGNTGDFNAGVRNTGWSNSGLTNTGAFNAGSLNTG Sbjct 361 FGNSGQLNAGSFNAGSINTGNFNSGQGNTGDFNAGVRNTGWSNSGLTNTGAFNAGSLNTG 420 Query 485 FGAVGTGSGPNSGFGNAGTNNSGFFNTGVGSSGFQNGGSNNSGLQNAVGTVIAAGFGNTG 544 FGAVGTGSGPNSGFGNAGTNNSGFFNTGVGSSGFQNGGSNNSGLQNAVGTVIAAGFGNTG Sbjct 421 FGAVGTGSGPNSGFGNAGTNNSGFFNTGVGSSGFQNGGSNNSGLQNAVGTVIAAGFGNTG 480 Query 545 AQTVGIANSGVLNSGFFNSGVHNSGGFNSENQRSGFGN 582 AQTVGIANSGVLNSGFFNSGVHNSGGFNSENQRSGFGN Sbjct 481 AQTVGIANSGVLNSGFFNSGVHNSGGFNSENQRSGFGN 518 >gi|308378364|ref|ZP_07482324.2| putative PPE family protein [Mycobacterium tuberculosis SUMu009] gi|308352833|gb|EFP41684.1| putative PPE family protein [Mycobacterium tuberculosis SUMu009] Length=512 Score = 879 bits (2270), Expect = 0.0, Method: Compositional matrix adjust. Identities = 499/511 (98%), Positives = 500/511 (98%), Gaps = 0/511 (0%) Query 72 YAGWLSAAAARAAGAAAQAKAVASAFEAARAATVHPLLVAANRNAFAQLVMSNWFGLNAP 131 G + GAAAQAKAVASAFEAARAATVHPLLVAANRNAFAQLVMSNWFGLNAP Sbjct 2 VCGMVERCGGPGRGAAAQAKAVASAFEAARAATVHPLLVAANRNAFAQLVMSNWFGLNAP 61 Query 132 LIAAVEGAYEQMWAADVAAMVGYHSGASAAAEQLVPFQQALQQLPNLGIGNIGNANLGGG 191 LIAAVEGAYEQMWAADVAAMVGYHSGASAAAEQLVPFQQALQQLPNLGIGNIGNANLGGG Sbjct 62 LIAAVEGAYEQMWAADVAAMVGYHSGASAAAEQLVPFQQALQQLPNLGIGNIGNANLGGG 121 Query 192 NTGDLNTGNGNIGNTNLGSGNRGDANLGSGNIGNSNVGGGNVGNGNFGSGNGRAGLPGSG 251 NTGDLNTGNGNIGNTNLGSGNRGDANLGSGNIGNSNVGGGNVGNGNFGSGNGRAGLPGSG Sbjct 122 NTGDLNTGNGNIGNTNLGSGNRGDANLGSGNIGNSNVGGGNVGNGNFGSGNGRAGLPGSG 181 Query 252 NVGNGNLGNSNLGSGNTGNSNVGFGNTGNNNVGTGNAGSGNIGAGNTGSSNWGFGNNGIG 311 NVGNGNLGNSNLGSGNTGNSNVGFGNTGNNNVGTGNAGSGNIGAGNTGSSNWGFGNNGIG Sbjct 182 NVGNGNLGNSNLGSGNTGNSNVGFGNTGNNNVGTGNAGSGNIGAGNTGSSNWGFGNNGIG 241 Query 312 NIGFGNTGNGNIGFGLTGNNQVGIGGLNSGSGNIGLFNSGTNNVGFFNSGNGNLGIGNSS 371 NIGFGNTGNGNIGFGLTGNNQVGIGGLNSGSGNIGLFNSGTNNVGFFNSGNGNLGIGNSS Sbjct 242 NIGFGNTGNGNIGFGLTGNNQVGIGGLNSGSGNIGLFNSGTNNVGFFNSGNGNLGIGNSS 301 Query 372 DANVGIGNSGATVGPFVAGHNTGFGNSGSLNTGMGNAGGVNTGFGNGGAINLGFGNSGQL 431 DANVGIGNSGATVGPFVAGHNTGFGNSGSLNTGMGNAGGVNTGFGNGGAINLGFGNSGQL Sbjct 302 DANVGIGNSGATVGPFVAGHNTGFGNSGSLNTGMGNAGGVNTGFGNGGAINLGFGNSGQL 361 Query 432 NAGSFNAGSINTGNFNSGQGNTGDFNAGVRNTGWSNSGLTNTGAFNAGSLNTGFGAVGTG 491 NAGSFNAGSINTGNFNSGQGNTGDFNAGVRNTGWSNSGLTNTGAFNAGSLNTGFGAVGTG Sbjct 362 NAGSFNAGSINTGNFNSGQGNTGDFNAGVRNTGWSNSGLTNTGAFNAGSLNTGFGAVGTG 421 Query 492 SGPNSGFGNAGTNNSGFFNTGVGSSGFQNGGSNNSGLQNAVGTVIAAGFGNTGAQTVGIA 551 SGPNSGFGNAGTNNSGFFNTGVGSSGFQNGGSNNSGLQNAVGTVIAAGFGNTGAQTVGIA Sbjct 422 SGPNSGFGNAGTNNSGFFNTGVGSSGFQNGGSNNSGLQNAVGTVIAAGFGNTGAQTVGIA 481 Query 552 NSGVLNSGFFNSGVHNSGGFNSENQRSGFGN 582 NSGVLNSGFFNSGVHNSGGFNSENQRSGFGN Sbjct 482 NSGVLNSGFFNSGVHNSGGFNSENQRSGFGN 512 >gi|306778415|ref|ZP_07416752.1| PPE family protein [Mycobacterium tuberculosis SUMu002] gi|308328515|gb|EFP17366.1| PPE family protein [Mycobacterium tuberculosis SUMu002] Length=581 Score = 870 bits (2248), Expect = 0.0, Method: Compositional matrix adjust. Identities = 578/582 (99%), Positives = 578/582 (99%), Gaps = 1/582 (0%) Query 1 MNYAVLPPELNSLRMFTGAGSAPMLAAAVAWDGLAAELGSAASSFGSVTSDLASQAWQGP 60 MNYAVLPPELNSLRMFTGAGSAPMLAAAVAWDGLAAELGSAASSFGSVTSDLASQAWQGP Sbjct 1 MNYAVLPPELNSLRMFTGAGSAPMLAAAVAWDGLAAELGSAASSFGSVTSDLASQAWQGP 60 Query 61 AAAAMAAAAAPYAGWLSAAAARAAGAAAQAKAVASAFEAARAATVHPLLVAANRNAFAQL 120 AAA AAAA YAGWLSAAAARAAGAAAQAKAVASAFEAARAATVHPLLVAANRNAFAQL Sbjct 61 AAAMAAAAAP-YAGWLSAAAARAAGAAAQAKAVASAFEAARAATVHPLLVAANRNAFAQL 119 Query 121 VMSNWFGLNAPLIAAVEGAYEQMWAADVAAMVGYHSGASAAAEQLVPFQQALQQLPNLGI 180 VMSNWFGLNAPLIAAVEGAYEQMWAADVAAMVGYHSGASAAAEQLVPFQQALQQLPNLGI Sbjct 120 VMSNWFGLNAPLIAAVEGAYEQMWAADVAAMVGYHSGASAAAEQLVPFQQALQQLPNLGI 179 Query 181 GNIGNANLGGGNTGDLNTGNGNIGNTNLGSGNRGDANLGSGNIGNSNVGGGNVGNGNFGS 240 GNIGNANLGGGNTGDLNTGNGNIGNTNLGSGNRGDANLGSGNIGNSNVGGGNVGNGNFGS Sbjct 180 GNIGNANLGGGNTGDLNTGNGNIGNTNLGSGNRGDANLGSGNIGNSNVGGGNVGNGNFGS 239 Query 241 GNGRAGLPGSGNVGNGNLGNSNLGSGNTGNSNVGFGNTGNNNVGTGNAGSGNIGAGNTGS 300 GNGRAGLPGSGNVGNGNLGNSNLGSGNTGNSNVGFGNTGNNNVGTGNAGSGNIGAGNTGS Sbjct 240 GNGRAGLPGSGNVGNGNLGNSNLGSGNTGNSNVGFGNTGNNNVGTGNAGSGNIGAGNTGS 299 Query 301 SNWGFGNNGIGNIGFGNTGNGNIGFGLTGNNQVGIGGLNSGSGNIGLFNSGTNNVGFFNS 360 SNWGFGNNGIGNIGFGNTGNGNIGFGLTGNNQVGIGGLNSGSGNIGLFNSGTNNVGFFNS Sbjct 300 SNWGFGNNGIGNIGFGNTGNGNIGFGLTGNNQVGIGGLNSGSGNIGLFNSGTNNVGFFNS 359 Query 361 GNGNLGIGNSSDANVGIGNSGATVGPFVAGHNTGFGNSGSLNTGMGNAGGVNTGFGNGGA 420 GNGNLGIGNSSDANVGIGNSGATVGPFVAGHNTGFGNSGSLNTGMGNAGGVNTGFGNGGA Sbjct 360 GNGNLGIGNSSDANVGIGNSGATVGPFVAGHNTGFGNSGSLNTGMGNAGGVNTGFGNGGA 419 Query 421 INLGFGNSGQLNAGSFNAGSINTGNFNSGQGNTGDFNAGVRNTGWSNSGLTNTGAFNAGS 480 INLGFGNSGQLNAGSFNAGSINTGNFNSGQGNTGDFNAGVRNTGWSNSGLTNTGAFNAGS Sbjct 420 INLGFGNSGQLNAGSFNAGSINTGNFNSGQGNTGDFNAGVRNTGWSNSGLTNTGAFNAGS 479 Query 481 LNTGFGAVGTGSGPNSGFGNAGTNNSGFFNTGVGSSGFQNGGSNNSGLQNAVGTVIAAGF 540 LNTGFGAVGTGSGPNSGFGNAGTNNSGFFNTGVGSSGFQNGGSNNSGLQNAVGTVIAAGF Sbjct 480 LNTGFGAVGTGSGPNSGFGNAGTNNSGFFNTGVGSSGFQNGGSNNSGLQNAVGTVIAAGF 539 Query 541 GNTGAQTVGIANSGVLNSGFFNSGVHNSGGFNSENQRSGFGN 582 GNTGAQTVGIANSGVLNSGFFNSGVHNSGGFNSENQRSGFGN Sbjct 540 GNTGAQTVGIANSGVLNSGFFNSGVHNSGGFNSENQRSGFGN 581 >gi|289763711|ref|ZP_06523089.1| PPE family protein [Mycobacterium tuberculosis GM 1503] gi|289711217|gb|EFD75233.1| PPE family protein [Mycobacterium tuberculosis GM 1503] Length=581 Score = 870 bits (2248), Expect = 0.0, Method: Compositional matrix adjust. Identities = 580/582 (99%), Positives = 580/582 (99%), Gaps = 1/582 (0%) Query 1 MNYAVLPPELNSLRMFTGAGSAPMLAAAVAWDGLAAELGSAASSFGSVTSDLASQAWQGP 60 MNYAVLPPELNSLRMFTGAGSAPMLAAAVAWDGLAAELGSAASSFGSVTSDLASQAWQGP Sbjct 1 MNYAVLPPELNSLRMFTGAGSAPMLAAAVAWDGLAAELGSAASSFGSVTSDLASQAWQGP 60 Query 61 AAAAMAAAAAPYAGWLSAAAARAAGAAAQAKAVASAFEAARAATVHPLLVAANRNAFAQL 120 AAAAMAAAA YAGWLSAAAARAAGAAAQAKAVASAFEAARAATVHPLLVAANRNAFAQL Sbjct 61 AAAAMAAAAP-YAGWLSAAAARAAGAAAQAKAVASAFEAARAATVHPLLVAANRNAFAQL 119 Query 121 VMSNWFGLNAPLIAAVEGAYEQMWAADVAAMVGYHSGASAAAEQLVPFQQALQQLPNLGI 180 VMSNWFGLNAPLIAAVEGAYEQMWAADVAAMVGYHSGASAAAEQLVPFQQALQQLPNLGI Sbjct 120 VMSNWFGLNAPLIAAVEGAYEQMWAADVAAMVGYHSGASAAAEQLVPFQQALQQLPNLGI 179 Query 181 GNIGNANLGGGNTGDLNTGNGNIGNTNLGSGNRGDANLGSGNIGNSNVGGGNVGNGNFGS 240 GNIGNANLGGGNTGDLNTGNGNIGNTNLGSGNRGDANLGSGNIGNSNVGGGNVGNGNFGS Sbjct 180 GNIGNANLGGGNTGDLNTGNGNIGNTNLGSGNRGDANLGSGNIGNSNVGGGNVGNGNFGS 239 Query 241 GNGRAGLPGSGNVGNGNLGNSNLGSGNTGNSNVGFGNTGNNNVGTGNAGSGNIGAGNTGS 300 GNGRAGLPGSGNVGNGNLGNSNLGSGNTGNSNVGFGNTGNNNVGTGNAGSGNIGAGNTGS Sbjct 240 GNGRAGLPGSGNVGNGNLGNSNLGSGNTGNSNVGFGNTGNNNVGTGNAGSGNIGAGNTGS 299 Query 301 SNWGFGNNGIGNIGFGNTGNGNIGFGLTGNNQVGIGGLNSGSGNIGLFNSGTNNVGFFNS 360 SNWGFGNNGIGNIGFGNTGNGNIGFGLTGNNQVGIGGLNSGSGNIGLFNSGTNNVGFFNS Sbjct 300 SNWGFGNNGIGNIGFGNTGNGNIGFGLTGNNQVGIGGLNSGSGNIGLFNSGTNNVGFFNS 359 Query 361 GNGNLGIGNSSDANVGIGNSGATVGPFVAGHNTGFGNSGSLNTGMGNAGGVNTGFGNGGA 420 GNGNLGIGNSSDANVGIGNSGATVGPFVAGHNTGFGNSGSLNTGMGNAGGVNTGFGNGGA Sbjct 360 GNGNLGIGNSSDANVGIGNSGATVGPFVAGHNTGFGNSGSLNTGMGNAGGVNTGFGNGGA 419 Query 421 INLGFGNSGQLNAGSFNAGSINTGNFNSGQGNTGDFNAGVRNTGWSNSGLTNTGAFNAGS 480 INLGFGNSGQLNAGSFNAGSINTGNFNSGQGNTGDFNAGVRNTGWSNSGLTNTGAFNAGS Sbjct 420 INLGFGNSGQLNAGSFNAGSINTGNFNSGQGNTGDFNAGVRNTGWSNSGLTNTGAFNAGS 479 Query 481 LNTGFGAVGTGSGPNSGFGNAGTNNSGFFNTGVGSSGFQNGGSNNSGLQNAVGTVIAAGF 540 LNTGFGAVGTGSGPNSGFGNAGTNNSGFFNTGVGSSGFQNGGSNNSGLQNAVGTVIAAGF Sbjct 480 LNTGFGAVGTGSGPNSGFGNAGTNNSGFFNTGVGSSGFQNGGSNNSGLQNAVGTVIAAGF 539 Query 541 GNTGAQTVGIANSGVLNSGFFNSGVHNSGGFNSENQRSGFGN 582 GNTGAQTVGIANSGVLNSGFFNSGVHNSGGFNSENQRSGFGN Sbjct 540 GNTGAQTVGIANSGVLNSGFFNSGVHNSGGFNSENQRSGFGN 581 >gi|323717806|gb|EGB27003.1| PPE family protein [Mycobacterium tuberculosis CDC1551A] Length=494 Score = 869 bits (2246), Expect = 0.0, Method: Compositional matrix adjust. Identities = 494/494 (100%), Positives = 494/494 (100%), Gaps = 0/494 (0%) Query 89 QAKAVASAFEAARAATVHPLLVAANRNAFAQLVMSNWFGLNAPLIAAVEGAYEQMWAADV 148 QAKAVASAFEAARAATVHPLLVAANRNAFAQLVMSNWFGLNAPLIAAVEGAYEQMWAADV Sbjct 1 QAKAVASAFEAARAATVHPLLVAANRNAFAQLVMSNWFGLNAPLIAAVEGAYEQMWAADV 60 Query 149 AAMVGYHSGASAAAEQLVPFQQALQQLPNLGIGNIGNANLGGGNTGDLNTGNGNIGNTNL 208 AAMVGYHSGASAAAEQLVPFQQALQQLPNLGIGNIGNANLGGGNTGDLNTGNGNIGNTNL Sbjct 61 AAMVGYHSGASAAAEQLVPFQQALQQLPNLGIGNIGNANLGGGNTGDLNTGNGNIGNTNL 120 Query 209 GSGNRGDANLGSGNIGNSNVGGGNVGNGNFGSGNGRAGLPGSGNVGNGNLGNSNLGSGNT 268 GSGNRGDANLGSGNIGNSNVGGGNVGNGNFGSGNGRAGLPGSGNVGNGNLGNSNLGSGNT Sbjct 121 GSGNRGDANLGSGNIGNSNVGGGNVGNGNFGSGNGRAGLPGSGNVGNGNLGNSNLGSGNT 180 Query 269 GNSNVGFGNTGNNNVGTGNAGSGNIGAGNTGSSNWGFGNNGIGNIGFGNTGNGNIGFGLT 328 GNSNVGFGNTGNNNVGTGNAGSGNIGAGNTGSSNWGFGNNGIGNIGFGNTGNGNIGFGLT Sbjct 181 GNSNVGFGNTGNNNVGTGNAGSGNIGAGNTGSSNWGFGNNGIGNIGFGNTGNGNIGFGLT 240 Query 329 GNNQVGIGGLNSGSGNIGLFNSGTNNVGFFNSGNGNLGIGNSSDANVGIGNSGATVGPFV 388 GNNQVGIGGLNSGSGNIGLFNSGTNNVGFFNSGNGNLGIGNSSDANVGIGNSGATVGPFV Sbjct 241 GNNQVGIGGLNSGSGNIGLFNSGTNNVGFFNSGNGNLGIGNSSDANVGIGNSGATVGPFV 300 Query 389 AGHNTGFGNSGSLNTGMGNAGGVNTGFGNGGAINLGFGNSGQLNAGSFNAGSINTGNFNS 448 AGHNTGFGNSGSLNTGMGNAGGVNTGFGNGGAINLGFGNSGQLNAGSFNAGSINTGNFNS Sbjct 301 AGHNTGFGNSGSLNTGMGNAGGVNTGFGNGGAINLGFGNSGQLNAGSFNAGSINTGNFNS 360 Query 449 GQGNTGDFNAGVRNTGWSNSGLTNTGAFNAGSLNTGFGAVGTGSGPNSGFGNAGTNNSGF 508 GQGNTGDFNAGVRNTGWSNSGLTNTGAFNAGSLNTGFGAVGTGSGPNSGFGNAGTNNSGF Sbjct 361 GQGNTGDFNAGVRNTGWSNSGLTNTGAFNAGSLNTGFGAVGTGSGPNSGFGNAGTNNSGF 420 Query 509 FNTGVGSSGFQNGGSNNSGLQNAVGTVIAAGFGNTGAQTVGIANSGVLNSGFFNSGVHNS 568 FNTGVGSSGFQNGGSNNSGLQNAVGTVIAAGFGNTGAQTVGIANSGVLNSGFFNSGVHNS Sbjct 421 FNTGVGSSGFQNGGSNNSGLQNAVGTVIAAGFGNTGAQTVGIANSGVLNSGFFNSGVHNS 480 Query 569 GGFNSENQRSGFGN 582 GGFNSENQRSGFGN Sbjct 481 GGFNSENQRSGFGN 494 >gi|289555798|ref|ZP_06445008.1| PPE family protein [Mycobacterium tuberculosis KZN 605] gi|289440430|gb|EFD22923.1| PPE family protein [Mycobacterium tuberculosis KZN 605] Length=490 Score = 861 bits (2224), Expect = 0.0, Method: Compositional matrix adjust. Identities = 489/490 (99%), Positives = 490/490 (100%), Gaps = 0/490 (0%) Query 93 VASAFEAARAATVHPLLVAANRNAFAQLVMSNWFGLNAPLIAAVEGAYEQMWAADVAAMV 152 +ASAFEAARAATVHPLLVAANRNAFAQLVMSNWFGLNAPLIAAVEGAYEQMWAADVAAMV Sbjct 1 MASAFEAARAATVHPLLVAANRNAFAQLVMSNWFGLNAPLIAAVEGAYEQMWAADVAAMV 60 Query 153 GYHSGASAAAEQLVPFQQALQQLPNLGIGNIGNANLGGGNTGDLNTGNGNIGNTNLGSGN 212 GYHSGASAAAEQLVPFQQALQQLPNLGIGNIGNANLGGGNTGDLNTGNGNIGNTNLGSGN Sbjct 61 GYHSGASAAAEQLVPFQQALQQLPNLGIGNIGNANLGGGNTGDLNTGNGNIGNTNLGSGN 120 Query 213 RGDANLGSGNIGNSNVGGGNVGNGNFGSGNGRAGLPGSGNVGNGNLGNSNLGSGNTGNSN 272 RGDANLGSGNIGNSNVGGGNVGNGNFGSGNGRAGLPGSGNVGNGNLGNSNLGSGNTGNSN Sbjct 121 RGDANLGSGNIGNSNVGGGNVGNGNFGSGNGRAGLPGSGNVGNGNLGNSNLGSGNTGNSN 180 Query 273 VGFGNTGNNNVGTGNAGSGNIGAGNTGSSNWGFGNNGIGNIGFGNTGNGNIGFGLTGNNQ 332 VGFGNTGNNNVGTGNAGSGNIGAGNTGSSNWGFGNNGIGNIGFGNTGNGNIGFGLTGNNQ Sbjct 181 VGFGNTGNNNVGTGNAGSGNIGAGNTGSSNWGFGNNGIGNIGFGNTGNGNIGFGLTGNNQ 240 Query 333 VGIGGLNSGSGNIGLFNSGTNNVGFFNSGNGNLGIGNSSDANVGIGNSGATVGPFVAGHN 392 VGIGGLNSGSGNIGLFNSGTNNVGFFNSGNGNLGIGNSSDANVGIGNSGATVGPFVAGHN Sbjct 241 VGIGGLNSGSGNIGLFNSGTNNVGFFNSGNGNLGIGNSSDANVGIGNSGATVGPFVAGHN 300 Query 393 TGFGNSGSLNTGMGNAGGVNTGFGNGGAINLGFGNSGQLNAGSFNAGSINTGNFNSGQGN 452 TGFGNSGSLNTGMGNAGGVNTGFGNGGAINLGFGNSGQLNAGSFNAGSINTGNFNSGQGN Sbjct 301 TGFGNSGSLNTGMGNAGGVNTGFGNGGAINLGFGNSGQLNAGSFNAGSINTGNFNSGQGN 360 Query 453 TGDFNAGVRNTGWSNSGLTNTGAFNAGSLNTGFGAVGTGSGPNSGFGNAGTNNSGFFNTG 512 TGDFNAGVRNTGWSNSGLTNTGAFNAGSLNTGFGAVGTGSGPNSGFGNAGTNNSGFFNTG Sbjct 361 TGDFNAGVRNTGWSNSGLTNTGAFNAGSLNTGFGAVGTGSGPNSGFGNAGTNNSGFFNTG 420 Query 513 VGSSGFQNGGSNNSGLQNAVGTVIAAGFGNTGAQTVGIANSGVLNSGFFNSGVHNSGGFN 572 VGSSGFQNGGSNNSGLQNAVGTVIAAGFGNTGAQTVGIANSGVLNSGFFNSGVHNSGGFN Sbjct 421 VGSSGFQNGGSNNSGLQNAVGTVIAAGFGNTGAQTVGIANSGVLNSGFFNSGVHNSGGFN 480 Query 573 SENQRSGFGN 582 SENQRSGFGN Sbjct 481 SENQRSGFGN 490 >gi|306974002|ref|ZP_07486663.1| hypothetical protein TMJG_00778 [Mycobacterium tuberculosis SUMu010] gi|308356683|gb|EFP45534.1| hypothetical protein TMJG_00778 [Mycobacterium tuberculosis SUMu010] Length=488 Score = 858 bits (2218), Expect = 0.0, Method: Compositional matrix adjust. Identities = 488/488 (100%), Positives = 488/488 (100%), Gaps = 0/488 (0%) Query 95 SAFEAARAATVHPLLVAANRNAFAQLVMSNWFGLNAPLIAAVEGAYEQMWAADVAAMVGY 154 SAFEAARAATVHPLLVAANRNAFAQLVMSNWFGLNAPLIAAVEGAYEQMWAADVAAMVGY Sbjct 1 SAFEAARAATVHPLLVAANRNAFAQLVMSNWFGLNAPLIAAVEGAYEQMWAADVAAMVGY 60 Query 155 HSGASAAAEQLVPFQQALQQLPNLGIGNIGNANLGGGNTGDLNTGNGNIGNTNLGSGNRG 214 HSGASAAAEQLVPFQQALQQLPNLGIGNIGNANLGGGNTGDLNTGNGNIGNTNLGSGNRG Sbjct 61 HSGASAAAEQLVPFQQALQQLPNLGIGNIGNANLGGGNTGDLNTGNGNIGNTNLGSGNRG 120 Query 215 DANLGSGNIGNSNVGGGNVGNGNFGSGNGRAGLPGSGNVGNGNLGNSNLGSGNTGNSNVG 274 DANLGSGNIGNSNVGGGNVGNGNFGSGNGRAGLPGSGNVGNGNLGNSNLGSGNTGNSNVG Sbjct 121 DANLGSGNIGNSNVGGGNVGNGNFGSGNGRAGLPGSGNVGNGNLGNSNLGSGNTGNSNVG 180 Query 275 FGNTGNNNVGTGNAGSGNIGAGNTGSSNWGFGNNGIGNIGFGNTGNGNIGFGLTGNNQVG 334 FGNTGNNNVGTGNAGSGNIGAGNTGSSNWGFGNNGIGNIGFGNTGNGNIGFGLTGNNQVG Sbjct 181 FGNTGNNNVGTGNAGSGNIGAGNTGSSNWGFGNNGIGNIGFGNTGNGNIGFGLTGNNQVG 240 Query 335 IGGLNSGSGNIGLFNSGTNNVGFFNSGNGNLGIGNSSDANVGIGNSGATVGPFVAGHNTG 394 IGGLNSGSGNIGLFNSGTNNVGFFNSGNGNLGIGNSSDANVGIGNSGATVGPFVAGHNTG Sbjct 241 IGGLNSGSGNIGLFNSGTNNVGFFNSGNGNLGIGNSSDANVGIGNSGATVGPFVAGHNTG 300 Query 395 FGNSGSLNTGMGNAGGVNTGFGNGGAINLGFGNSGQLNAGSFNAGSINTGNFNSGQGNTG 454 FGNSGSLNTGMGNAGGVNTGFGNGGAINLGFGNSGQLNAGSFNAGSINTGNFNSGQGNTG Sbjct 301 FGNSGSLNTGMGNAGGVNTGFGNGGAINLGFGNSGQLNAGSFNAGSINTGNFNSGQGNTG 360 Query 455 DFNAGVRNTGWSNSGLTNTGAFNAGSLNTGFGAVGTGSGPNSGFGNAGTNNSGFFNTGVG 514 DFNAGVRNTGWSNSGLTNTGAFNAGSLNTGFGAVGTGSGPNSGFGNAGTNNSGFFNTGVG Sbjct 361 DFNAGVRNTGWSNSGLTNTGAFNAGSLNTGFGAVGTGSGPNSGFGNAGTNNSGFFNTGVG 420 Query 515 SSGFQNGGSNNSGLQNAVGTVIAAGFGNTGAQTVGIANSGVLNSGFFNSGVHNSGGFNSE 574 SSGFQNGGSNNSGLQNAVGTVIAAGFGNTGAQTVGIANSGVLNSGFFNSGVHNSGGFNSE Sbjct 421 SSGFQNGGSNNSGLQNAVGTVIAAGFGNTGAQTVGIANSGVLNSGFFNSGVHNSGGFNSE 480 Query 575 NQRSGFGN 582 NQRSGFGN Sbjct 481 NQRSGFGN 488 >gi|306790802|ref|ZP_07429124.1| hypothetical protein TMDG_01263 [Mycobacterium tuberculosis SUMu004] gi|308332825|gb|EFP21676.1| hypothetical protein TMDG_01263 [Mycobacterium tuberculosis SUMu004] Length=482 Score = 845 bits (2183), Expect = 0.0, Method: Compositional matrix adjust. Identities = 482/482 (100%), Positives = 482/482 (100%), Gaps = 0/482 (0%) Query 101 RAATVHPLLVAANRNAFAQLVMSNWFGLNAPLIAAVEGAYEQMWAADVAAMVGYHSGASA 160 RAATVHPLLVAANRNAFAQLVMSNWFGLNAPLIAAVEGAYEQMWAADVAAMVGYHSGASA Sbjct 1 RAATVHPLLVAANRNAFAQLVMSNWFGLNAPLIAAVEGAYEQMWAADVAAMVGYHSGASA 60 Query 161 AAEQLVPFQQALQQLPNLGIGNIGNANLGGGNTGDLNTGNGNIGNTNLGSGNRGDANLGS 220 AAEQLVPFQQALQQLPNLGIGNIGNANLGGGNTGDLNTGNGNIGNTNLGSGNRGDANLGS Sbjct 61 AAEQLVPFQQALQQLPNLGIGNIGNANLGGGNTGDLNTGNGNIGNTNLGSGNRGDANLGS 120 Query 221 GNIGNSNVGGGNVGNGNFGSGNGRAGLPGSGNVGNGNLGNSNLGSGNTGNSNVGFGNTGN 280 GNIGNSNVGGGNVGNGNFGSGNGRAGLPGSGNVGNGNLGNSNLGSGNTGNSNVGFGNTGN Sbjct 121 GNIGNSNVGGGNVGNGNFGSGNGRAGLPGSGNVGNGNLGNSNLGSGNTGNSNVGFGNTGN 180 Query 281 NNVGTGNAGSGNIGAGNTGSSNWGFGNNGIGNIGFGNTGNGNIGFGLTGNNQVGIGGLNS 340 NNVGTGNAGSGNIGAGNTGSSNWGFGNNGIGNIGFGNTGNGNIGFGLTGNNQVGIGGLNS Sbjct 181 NNVGTGNAGSGNIGAGNTGSSNWGFGNNGIGNIGFGNTGNGNIGFGLTGNNQVGIGGLNS 240 Query 341 GSGNIGLFNSGTNNVGFFNSGNGNLGIGNSSDANVGIGNSGATVGPFVAGHNTGFGNSGS 400 GSGNIGLFNSGTNNVGFFNSGNGNLGIGNSSDANVGIGNSGATVGPFVAGHNTGFGNSGS Sbjct 241 GSGNIGLFNSGTNNVGFFNSGNGNLGIGNSSDANVGIGNSGATVGPFVAGHNTGFGNSGS 300 Query 401 LNTGMGNAGGVNTGFGNGGAINLGFGNSGQLNAGSFNAGSINTGNFNSGQGNTGDFNAGV 460 LNTGMGNAGGVNTGFGNGGAINLGFGNSGQLNAGSFNAGSINTGNFNSGQGNTGDFNAGV Sbjct 301 LNTGMGNAGGVNTGFGNGGAINLGFGNSGQLNAGSFNAGSINTGNFNSGQGNTGDFNAGV 360 Query 461 RNTGWSNSGLTNTGAFNAGSLNTGFGAVGTGSGPNSGFGNAGTNNSGFFNTGVGSSGFQN 520 RNTGWSNSGLTNTGAFNAGSLNTGFGAVGTGSGPNSGFGNAGTNNSGFFNTGVGSSGFQN Sbjct 361 RNTGWSNSGLTNTGAFNAGSLNTGFGAVGTGSGPNSGFGNAGTNNSGFFNTGVGSSGFQN 420 Query 521 GGSNNSGLQNAVGTVIAAGFGNTGAQTVGIANSGVLNSGFFNSGVHNSGGFNSENQRSGF 580 GGSNNSGLQNAVGTVIAAGFGNTGAQTVGIANSGVLNSGFFNSGVHNSGGFNSENQRSGF Sbjct 421 GGSNNSGLQNAVGTVIAAGFGNTGAQTVGIANSGVLNSGFFNSGVHNSGGFNSENQRSGF 480 Query 581 GN 582 GN Sbjct 481 GN 482 >gi|307081712|ref|ZP_07490882.1| hypothetical protein TMKG_00770 [Mycobacterium tuberculosis SUMu011] gi|308360637|gb|EFP49488.1| hypothetical protein TMKG_00770 [Mycobacterium tuberculosis SUMu011] Length=480 Score = 840 bits (2171), Expect = 0.0, Method: Compositional matrix adjust. Identities = 480/480 (100%), Positives = 480/480 (100%), Gaps = 0/480 (0%) Query 103 ATVHPLLVAANRNAFAQLVMSNWFGLNAPLIAAVEGAYEQMWAADVAAMVGYHSGASAAA 162 ATVHPLLVAANRNAFAQLVMSNWFGLNAPLIAAVEGAYEQMWAADVAAMVGYHSGASAAA Sbjct 1 ATVHPLLVAANRNAFAQLVMSNWFGLNAPLIAAVEGAYEQMWAADVAAMVGYHSGASAAA 60 Query 163 EQLVPFQQALQQLPNLGIGNIGNANLGGGNTGDLNTGNGNIGNTNLGSGNRGDANLGSGN 222 EQLVPFQQALQQLPNLGIGNIGNANLGGGNTGDLNTGNGNIGNTNLGSGNRGDANLGSGN Sbjct 61 EQLVPFQQALQQLPNLGIGNIGNANLGGGNTGDLNTGNGNIGNTNLGSGNRGDANLGSGN 120 Query 223 IGNSNVGGGNVGNGNFGSGNGRAGLPGSGNVGNGNLGNSNLGSGNTGNSNVGFGNTGNNN 282 IGNSNVGGGNVGNGNFGSGNGRAGLPGSGNVGNGNLGNSNLGSGNTGNSNVGFGNTGNNN Sbjct 121 IGNSNVGGGNVGNGNFGSGNGRAGLPGSGNVGNGNLGNSNLGSGNTGNSNVGFGNTGNNN 180 Query 283 VGTGNAGSGNIGAGNTGSSNWGFGNNGIGNIGFGNTGNGNIGFGLTGNNQVGIGGLNSGS 342 VGTGNAGSGNIGAGNTGSSNWGFGNNGIGNIGFGNTGNGNIGFGLTGNNQVGIGGLNSGS Sbjct 181 VGTGNAGSGNIGAGNTGSSNWGFGNNGIGNIGFGNTGNGNIGFGLTGNNQVGIGGLNSGS 240 Query 343 GNIGLFNSGTNNVGFFNSGNGNLGIGNSSDANVGIGNSGATVGPFVAGHNTGFGNSGSLN 402 GNIGLFNSGTNNVGFFNSGNGNLGIGNSSDANVGIGNSGATVGPFVAGHNTGFGNSGSLN Sbjct 241 GNIGLFNSGTNNVGFFNSGNGNLGIGNSSDANVGIGNSGATVGPFVAGHNTGFGNSGSLN 300 Query 403 TGMGNAGGVNTGFGNGGAINLGFGNSGQLNAGSFNAGSINTGNFNSGQGNTGDFNAGVRN 462 TGMGNAGGVNTGFGNGGAINLGFGNSGQLNAGSFNAGSINTGNFNSGQGNTGDFNAGVRN Sbjct 301 TGMGNAGGVNTGFGNGGAINLGFGNSGQLNAGSFNAGSINTGNFNSGQGNTGDFNAGVRN 360 Query 463 TGWSNSGLTNTGAFNAGSLNTGFGAVGTGSGPNSGFGNAGTNNSGFFNTGVGSSGFQNGG 522 TGWSNSGLTNTGAFNAGSLNTGFGAVGTGSGPNSGFGNAGTNNSGFFNTGVGSSGFQNGG Sbjct 361 TGWSNSGLTNTGAFNAGSLNTGFGAVGTGSGPNSGFGNAGTNNSGFFNTGVGSSGFQNGG 420 Query 523 SNNSGLQNAVGTVIAAGFGNTGAQTVGIANSGVLNSGFFNSGVHNSGGFNSENQRSGFGN 582 SNNSGLQNAVGTVIAAGFGNTGAQTVGIANSGVLNSGFFNSGVHNSGGFNSENQRSGFGN Sbjct 421 SNNSGLQNAVGTVIAAGFGNTGAQTVGIANSGVLNSGFFNSGVHNSGGFNSENQRSGFGN 480 >gi|306791127|ref|ZP_07429429.1| putative PPE family protein [Mycobacterium tuberculosis SUMu005] gi|308340243|gb|EFP29094.1| putative PPE family protein [Mycobacterium tuberculosis SUMu005] Length=553 Score = 818 bits (2112), Expect = 0.0, Method: Compositional matrix adjust. Identities = 550/554 (99%), Positives = 550/554 (99%), Gaps = 1/554 (0%) Query 1 MNYAVLPPELNSLRMFTGAGSAPMLAAAVAWDGLAAELGSAASSFGSVTSDLASQAWQGP 60 MNYAVLPPELNSLRMFTGAGSAPMLAAAVAWDGLAAELGSAASSFGSVTSDLASQAWQGP Sbjct 1 MNYAVLPPELNSLRMFTGAGSAPMLAAAVAWDGLAAELGSAASSFGSVTSDLASQAWQGP 60 Query 61 AAAAMAAAAAPYAGWLSAAAARAAGAAAQAKAVASAFEAARAATVHPLLVAANRNAFAQL 120 AAA AAAA YAGWLSAAAARAAGAAAQAKAVASAFEAARAATVHPLLVAANRNAFAQL Sbjct 61 AAAMAAAAAP-YAGWLSAAAARAAGAAAQAKAVASAFEAARAATVHPLLVAANRNAFAQL 119 Query 121 VMSNWFGLNAPLIAAVEGAYEQMWAADVAAMVGYHSGASAAAEQLVPFQQALQQLPNLGI 180 VMSNWFGLNAPLIAAVEGAYEQMWAADVAAMVGYHSGASAAAEQLVPFQQALQQLPNLGI Sbjct 120 VMSNWFGLNAPLIAAVEGAYEQMWAADVAAMVGYHSGASAAAEQLVPFQQALQQLPNLGI 179 Query 181 GNIGNANLGGGNTGDLNTGNGNIGNTNLGSGNRGDANLGSGNIGNSNVGGGNVGNGNFGS 240 GNIGNANLGGGNTGDLNTGNGNIGNTNLGSGNRGDANLGSGNIGNSNVGGGNVGNGNFGS Sbjct 180 GNIGNANLGGGNTGDLNTGNGNIGNTNLGSGNRGDANLGSGNIGNSNVGGGNVGNGNFGS 239 Query 241 GNGRAGLPGSGNVGNGNLGNSNLGSGNTGNSNVGFGNTGNNNVGTGNAGSGNIGAGNTGS 300 GNGRAGLPGSGNVGNGNLGNSNLGSGNTGNSNVGFGNTGNNNVGTGNAGSGNIGAGNTGS Sbjct 240 GNGRAGLPGSGNVGNGNLGNSNLGSGNTGNSNVGFGNTGNNNVGTGNAGSGNIGAGNTGS 299 Query 301 SNWGFGNNGIGNIGFGNTGNGNIGFGLTGNNQVGIGGLNSGSGNIGLFNSGTNNVGFFNS 360 SNWGFGNNGIGNIGFGNTGNGNIGFGLTGNNQVGIGGLNSGSGNIGLFNSGTNNVGFFNS Sbjct 300 SNWGFGNNGIGNIGFGNTGNGNIGFGLTGNNQVGIGGLNSGSGNIGLFNSGTNNVGFFNS 359 Query 361 GNGNLGIGNSSDANVGIGNSGATVGPFVAGHNTGFGNSGSLNTGMGNAGGVNTGFGNGGA 420 GNGNLGIGNSSDANVGIGNSGATVGPFVAGHNTGFGNSGSLNTGMGNAGGVNTGFGNGGA Sbjct 360 GNGNLGIGNSSDANVGIGNSGATVGPFVAGHNTGFGNSGSLNTGMGNAGGVNTGFGNGGA 419 Query 421 INLGFGNSGQLNAGSFNAGSINTGNFNSGQGNTGDFNAGVRNTGWSNSGLTNTGAFNAGS 480 INLGFGNSGQLNAGSFNAGSINTGNFNSGQGNTGDFNAGVRNTGWSNSGLTNTGAFNAGS Sbjct 420 INLGFGNSGQLNAGSFNAGSINTGNFNSGQGNTGDFNAGVRNTGWSNSGLTNTGAFNAGS 479 Query 481 LNTGFGAVGTGSGPNSGFGNAGTNNSGFFNTGVGSSGFQNGGSNNSGLQNAVGTVIAAGF 540 LNTGFGAVGTGSGPNSGFGNAGTNNSGFFNTGVGSSGFQNGGSNNSGLQNAVGTVIAAGF Sbjct 480 LNTGFGAVGTGSGPNSGFGNAGTNNSGFFNTGVGSSGFQNGGSNNSGLQNAVGTVIAAGF 539 Query 541 GNTGAQTVGIANSG 554 GNTGAQTVGIANSG Sbjct 540 GNTGAQTVGIANSG 553 Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 99/235 (43%), Positives = 129/235 (55%), Gaps = 37/235 (15%) Query 350 SGTNNVGFFNSGNGNLGIGNSSDANVGIGNSGATVGPFVAGHNTGFGNSGSLNTGMGNAG 409 +G +NVGF N+GN N+G GN+ N+G GN+G++ N GFGN+G N G GN G Sbjct 267 TGNSNVGFGNTGNNNVGTGNAGSGNIGAGNTGSS--------NWGFGNNGIGNIGFGNTG 318 Query 410 GVNTGFGNGGAINLGFG--NSGQLNAGSFNAGSINTGNFNSGQGNTGDFNAGVRNTGWSN 467 N GFG G +G G NSG N G FN+G+ N G FNSG GN G N+ N G N Sbjct 319 NGNIGFGLTGNNQVGIGGLNSGSGNIGLFNSGTNNVGFFNSGNGNLGIGNSSDANVGIGN 378 Query 468 SGLTNTGAFNAGSLNTGFGAVGTGSGPNSGFGNAGTNNSGFFNTGVGSSGFQNGGSNNSG 527 SG T G F AG N+GFGN+G+ N+G N G ++GF NGG+ Sbjct 379 SGAT-VGPFVAGH--------------NTGFGNSGSLNTGMGNAGGVNTGFGNGGA---- 419 Query 528 LQNAVGTVIAAGFGNTGAQTVGIANSGVLNSGFFNSGVHNSGGFNSENQRSGFGN 582 I GFGN+G G N+G +N+G FNSG N+G FN+ + +G+ N Sbjct 420 --------INLGFGNSGQLNAGSFNAGSINTGNFNSGQGNTGDFNAGVRNTGWSN 466 Score = 45.8 bits (107), Expect = 0.023, Method: Compositional matrix adjust. Identities = 90/213 (43%), Positives = 105/213 (50%), Gaps = 32/213 (15%) Query 392 NTGFGNSGSLNTGMGNAGGVNTGFGNGGAINLGFGNSGQLNAGSFNAGSINTGNFNSGQG 451 N G GN G+ N G GN G +NTG GN G NLG GN G N GS N G+ N G N G G Sbjct 176 NLGIGNIGNANLGGGNTGDLNTGNGNIGNTNLGSGNRGDANLGSGNIGNSNVGGGNVGNG 235 Query 452 NTGDF--NAGVRN------------------TGWSNSGLTNTGAFNAGSLNTGFGAVGTG 491 N G AG+ TG SN G NTG N G+ N G G +G G Sbjct 236 NFGSGNGRAGLPGSGNVGNGNLGNSNLGSGNTGNSNVGFGNTGNNNVGTGNAGSGNIGAG 295 Query 492 S--GPNSGFGNAGTNNSGFFNTGVGSSGFQNGGSNNSGLQNAVGTVIAAGFGNTGAQTVG 549 + N GFGN G N GF NTG G+ GF G+N G+ G N+G+ +G Sbjct 296 NTGSSNWGFGNNGIGNIGFGNTGNGNIGFGLTGNNQVGI----------GGLNSGSGNIG 345 Query 550 IANSGVLNSGFFNSGVHNSGGFNSENQRSGFGN 582 + NSG N GFFNSG N G NS + G GN Sbjct 346 LFNSGTNNVGFFNSGNGNLGIGNSSDANVGIGN 378 >gi|254366098|ref|ZP_04982142.1| PPE family protein [Mycobacterium tuberculosis str. Haarlem] gi|134151610|gb|EBA43655.1| PPE family protein [Mycobacterium tuberculosis str. Haarlem] Length=527 Score = 814 bits (2103), Expect = 0.0, Method: Compositional matrix adjust. Identities = 469/482 (98%), Positives = 470/482 (98%), Gaps = 2/482 (0%) Query 101 RAATVHPLLVAANRNAFAQLVMSNWFGLNAPLIAAVEGAYEQMWAADVAAMVGYHSGASA 160 R T+ A R FAQLVMSNWFGLNAPLIAAVEGAYEQMWAADVAAMVGYHSGASA Sbjct 48 RRCTLCWWRPTAMR--FAQLVMSNWFGLNAPLIAAVEGAYEQMWAADVAAMVGYHSGASA 105 Query 161 AAEQLVPFQQALQQLPNLGIGNIGNANLGGGNTGDLNTGNGNIGNTNLGSGNRGDANLGS 220 AAEQLVPFQQALQQLPNLGIGNIGNANLGGGNTGDLNTGNGNIGNTNLGSGNRGDANLGS Sbjct 106 AAEQLVPFQQALQQLPNLGIGNIGNANLGGGNTGDLNTGNGNIGNTNLGSGNRGDANLGS 165 Query 221 GNIGNSNVGGGNVGNGNFGSGNGRAGLPGSGNVGNGNLGNSNLGSGNTGNSNVGFGNTGN 280 GNIGNSNVGGGNVGNGNFGSGNGRAGLPGSGNVGNGNLGNSNLGSGNTGNSNVGFGNTGN Sbjct 166 GNIGNSNVGGGNVGNGNFGSGNGRAGLPGSGNVGNGNLGNSNLGSGNTGNSNVGFGNTGN 225 Query 281 NNVGTGNAGSGNIGAGNTGSSNWGFGNNGIGNIGFGNTGNGNIGFGLTGNNQVGIGGLNS 340 NNVGTGNAGSGNIGAGNTGSSNWGFGNNGIGNIGFGNTGNGNIGFGLTGNNQVGIGGLNS Sbjct 226 NNVGTGNAGSGNIGAGNTGSSNWGFGNNGIGNIGFGNTGNGNIGFGLTGNNQVGIGGLNS 285 Query 341 GSGNIGLFNSGTNNVGFFNSGNGNLGIGNSSDANVGIGNSGATVGPFVAGHNTGFGNSGS 400 G GNIGLFNSGTNNVGFFNSGNGNLGIGNSSDANVGIGNSGATVGPFVAGHNTGFGNSGS Sbjct 286 GRGNIGLFNSGTNNVGFFNSGNGNLGIGNSSDANVGIGNSGATVGPFVAGHNTGFGNSGS 345 Query 401 LNTGMGNAGGVNTGFGNGGAINLGFGNSGQLNAGSFNAGSINTGNFNSGQGNTGDFNAGV 460 LNTGMGNAGGVNTGFGNGGAINLGFGNSGQLNAGSFNAGSINTGNFNSGQGNTGDFNAGV Sbjct 346 LNTGMGNAGGVNTGFGNGGAINLGFGNSGQLNAGSFNAGSINTGNFNSGQGNTGDFNAGV 405 Query 461 RNTGWSNSGLTNTGAFNAGSLNTGFGAVGTGSGPNSGFGNAGTNNSGFFNTGVGSSGFQN 520 RNTGWSNSGLTNTGAFNAGSLNTGFGAVGTGSGPNSGFGNAGTNNSGFFNTGVGSSGFQN Sbjct 406 RNTGWSNSGLTNTGAFNAGSLNTGFGAVGTGSGPNSGFGNAGTNNSGFFNTGVGSSGFQN 465 Query 521 GGSNNSGLQNAVGTVIAAGFGNTGAQTVGIANSGVLNSGFFNSGVHNSGGFNSENQRSGF 580 GGSNNSGLQNAVGTVIAAGFGNTGAQTVGIANSGVLNSGFFNSGVHNSGGFNSENQRSGF Sbjct 466 GGSNNSGLQNAVGTVIAAGFGNTGAQTVGIANSGVLNSGFFNSGVHNSGGFNSENQRSGF 525 Query 581 GN 582 GN Sbjct 526 GN 527 >gi|289445125|ref|ZP_06434869.1| PPE family protein [Mycobacterium tuberculosis CPHL_A] gi|289418083|gb|EFD15284.1| PPE family protein [Mycobacterium tuberculosis CPHL_A] Length=520 Score = 745 bits (1923), Expect = 0.0, Method: Compositional matrix adjust. Identities = 463/509 (91%), Positives = 469/509 (93%), Gaps = 30/509 (5%) Query 104 TVHPLLVAANRNAFAQLVMSNWFGLNAPLIAAVEGAYEQMWAADVAAMVGYHSGASAAAE 163 TVHPLLVAANRNAFAQLVMSNWFGLNAPLIAAVEGAYEQMWAADVAAMVGYHSGASAAAE Sbjct 12 TVHPLLVAANRNAFAQLVMSNWFGLNAPLIAAVEGAYEQMWAADVAAMVGYHSGASAAAE 71 Query 164 QLVPFQQALQQLPNLGIGNIGNANLGGGNTGDLNTGNGNIGNTNLGSGNRGDANLGSGNI 223 QLVPFQQALQQLPNLGIGNIGNANLGGGNTGDLNTGNGNIGNTNLGSGNRGDANLGSGNI Sbjct 72 QLVPFQQALQQLPNLGIGNIGNANLGGGNTGDLNTGNGNIGNTNLGSGNRGDANLGSGNI 131 Query 224 GNSNVGGGNVGNGNFGSGNGRAGLP------------------------------GSGNV 253 GNSNVGGGNVGNGNFGSGNGRAGLP G+ NV Sbjct 132 GNSNVGGGNVGNGNFGSGNGRAGLPGSGNVGNGNLGNSNLGSGNTGNSNVGFGNTGNNNV 191 Query 254 GNGNLGNSNLGSGNTGNSNVGFGNTGNNNVGTGNAGSGNIGAGNTGSSNWGFGNNGIGNI 313 G GN G+ N+G+GNTG+SN GFGN G N+G GN GSGNIGAGNTGSSNWGFGNNGIGNI Sbjct 192 GTGNAGSGNIGAGNTGSSNWGFGNNGIGNIGFGNTGSGNIGAGNTGSSNWGFGNNGIGNI 251 Query 314 GFGNTGNGNIGFGLTGNNQVGIGGLNSGSGNIGLFNSGTNNVGFFNSGNGNLGIGNSSDA 373 GFGNTGNGNIGFGLTGNNQVGIGGLNSGSGNIGLFNSGTNNVGFFNSGNGNLGIGNSSDA Sbjct 252 GFGNTGNGNIGFGLTGNNQVGIGGLNSGSGNIGLFNSGTNNVGFFNSGNGNLGIGNSSDA 311 Query 374 NVGIGNSGATVGPFVAGHNTGFGNSGSLNTGMGNAGGVNTGFGNGGAINLGFGNSGQLNA 433 NVGIGNSGATVGPFVAGHNTGFGNSGSLNTGMGNAGGVNTGFGNGGAINLGFGNSGQLNA Sbjct 312 NVGIGNSGATVGPFVAGHNTGFGNSGSLNTGMGNAGGVNTGFGNGGAINLGFGNSGQLNA 371 Query 434 GSFNAGSINTGNFNSGQGNTGDFNAGVRNTGWSNSGLTNTGAFNAGSLNTGFGAVGTGSG 493 GSFNAGSINTGNFNSGQGNTGDFNAGVRNTGWSNSGLTNTGAFNAGSLNTGFGAVGTGSG Sbjct 372 GSFNAGSINTGNFNSGQGNTGDFNAGVRNTGWSNSGLTNTGAFNAGSLNTGFGAVGTGSG 431 Query 494 PNSGFGNAGTNNSGFFNTGVGSSGFQNGGSNNSGLQNAVGTVIAAGFGNTGAQTVGIANS 553 PNSGFGNAGTNNSGFFNTGVGSSGFQNGGSNNSGLQNAVGTVIAAGFGNTGAQTVGIANS Sbjct 432 PNSGFGNAGTNNSGFFNTGVGSSGFQNGGSNNSGLQNAVGTVIAAGFGNTGAQTVGIANS 491 Query 554 GVLNSGFFNSGVHNSGGFNSENQRSGFGN 582 GVLNSGFFNSGVHNSGGFNSENQRSGFGN Sbjct 492 GVLNSGFFNSGVHNSGGFNSENQRSGFGN 520 >gi|289759689|ref|ZP_06519067.1| predicted protein [Mycobacterium tuberculosis T85] gi|289715253|gb|EFD79265.1| predicted protein [Mycobacterium tuberculosis T85] Length=435 Score = 742 bits (1915), Expect = 0.0, Method: Compositional matrix adjust. Identities = 434/435 (99%), Positives = 435/435 (100%), Gaps = 0/435 (0%) Query 148 VAAMVGYHSGASAAAEQLVPFQQALQQLPNLGIGNIGNANLGGGNTGDLNTGNGNIGNTN 207 +AAMVGYHSGASAAAEQLVPFQQALQQLPNLGIGNIGNANLGGGNTGDLNTGNGNIGNTN Sbjct 1 MAAMVGYHSGASAAAEQLVPFQQALQQLPNLGIGNIGNANLGGGNTGDLNTGNGNIGNTN 60 Query 208 LGSGNRGDANLGSGNIGNSNVGGGNVGNGNFGSGNGRAGLPGSGNVGNGNLGNSNLGSGN 267 LGSGNRGDANLGSGNIGNSNVGGGNVGNGNFGSGNGRAGLPGSGNVGNGNLGNSNLGSGN Sbjct 61 LGSGNRGDANLGSGNIGNSNVGGGNVGNGNFGSGNGRAGLPGSGNVGNGNLGNSNLGSGN 120 Query 268 TGNSNVGFGNTGNNNVGTGNAGSGNIGAGNTGSSNWGFGNNGIGNIGFGNTGNGNIGFGL 327 TGNSNVGFGNTGNNNVGTGNAGSGNIGAGNTGSSNWGFGNNGIGNIGFGNTGNGNIGFGL Sbjct 121 TGNSNVGFGNTGNNNVGTGNAGSGNIGAGNTGSSNWGFGNNGIGNIGFGNTGNGNIGFGL 180 Query 328 TGNNQVGIGGLNSGSGNIGLFNSGTNNVGFFNSGNGNLGIGNSSDANVGIGNSGATVGPF 387 TGNNQVGIGGLNSGSGNIGLFNSGTNNVGFFNSGNGNLGIGNSSDANVGIGNSGATVGPF Sbjct 181 TGNNQVGIGGLNSGSGNIGLFNSGTNNVGFFNSGNGNLGIGNSSDANVGIGNSGATVGPF 240 Query 388 VAGHNTGFGNSGSLNTGMGNAGGVNTGFGNGGAINLGFGNSGQLNAGSFNAGSINTGNFN 447 VAGHNTGFGNSGSLNTGMGNAGGVNTGFGNGGAINLGFGNSGQLNAGSFNAGSINTGNFN Sbjct 241 VAGHNTGFGNSGSLNTGMGNAGGVNTGFGNGGAINLGFGNSGQLNAGSFNAGSINTGNFN 300 Query 448 SGQGNTGDFNAGVRNTGWSNSGLTNTGAFNAGSLNTGFGAVGTGSGPNSGFGNAGTNNSG 507 SGQGNTGDFNAGVRNTGWSNSGLTNTGAFNAGSLNTGFGAVGTGSGPNSGFGNAGTNNSG Sbjct 301 SGQGNTGDFNAGVRNTGWSNSGLTNTGAFNAGSLNTGFGAVGTGSGPNSGFGNAGTNNSG 360 Query 508 FFNTGVGSSGFQNGGSNNSGLQNAVGTVIAAGFGNTGAQTVGIANSGVLNSGFFNSGVHN 567 FFNTGVGSSGFQNGGSNNSGLQNAVGTVIAAGFGNTGAQTVGIANSGVLNSGFFNSGVHN Sbjct 361 FFNTGVGSSGFQNGGSNNSGLQNAVGTVIAAGFGNTGAQTVGIANSGVLNSGFFNSGVHN 420 Query 568 SGGFNSENQRSGFGN 582 SGGFNSENQRSGFGN Sbjct 421 SGGFNSENQRSGFGN 435 >gi|289747370|ref|ZP_06506748.1| PPE family protein [Mycobacterium tuberculosis 02_1987] gi|289687898|gb|EFD55386.1| PPE family protein [Mycobacterium tuberculosis 02_1987] Length=369 Score = 534 bits (1376), Expect = 1e-149, Method: Compositional matrix adjust. Identities = 339/339 (100%), Positives = 339/339 (100%), Gaps = 0/339 (0%) Query 244 RAGLPGSGNVGNGNLGNSNLGSGNTGNSNVGFGNTGNNNVGTGNAGSGNIGAGNTGSSNW 303 RAGLPGSGNVGNGNLGNSNLGSGNTGNSNVGFGNTGNNNVGTGNAGSGNIGAGNTGSSNW Sbjct 31 RAGLPGSGNVGNGNLGNSNLGSGNTGNSNVGFGNTGNNNVGTGNAGSGNIGAGNTGSSNW 90 Query 304 GFGNNGIGNIGFGNTGNGNIGFGLTGNNQVGIGGLNSGSGNIGLFNSGTNNVGFFNSGNG 363 GFGNNGIGNIGFGNTGNGNIGFGLTGNNQVGIGGLNSGSGNIGLFNSGTNNVGFFNSGNG Sbjct 91 GFGNNGIGNIGFGNTGNGNIGFGLTGNNQVGIGGLNSGSGNIGLFNSGTNNVGFFNSGNG 150 Query 364 NLGIGNSSDANVGIGNSGATVGPFVAGHNTGFGNSGSLNTGMGNAGGVNTGFGNGGAINL 423 NLGIGNSSDANVGIGNSGATVGPFVAGHNTGFGNSGSLNTGMGNAGGVNTGFGNGGAINL Sbjct 151 NLGIGNSSDANVGIGNSGATVGPFVAGHNTGFGNSGSLNTGMGNAGGVNTGFGNGGAINL 210 Query 424 GFGNSGQLNAGSFNAGSINTGNFNSGQGNTGDFNAGVRNTGWSNSGLTNTGAFNAGSLNT 483 GFGNSGQLNAGSFNAGSINTGNFNSGQGNTGDFNAGVRNTGWSNSGLTNTGAFNAGSLNT Sbjct 211 GFGNSGQLNAGSFNAGSINTGNFNSGQGNTGDFNAGVRNTGWSNSGLTNTGAFNAGSLNT 270 Query 484 GFGAVGTGSGPNSGFGNAGTNNSGFFNTGVGSSGFQNGGSNNSGLQNAVGTVIAAGFGNT 543 GFGAVGTGSGPNSGFGNAGTNNSGFFNTGVGSSGFQNGGSNNSGLQNAVGTVIAAGFGNT Sbjct 271 GFGAVGTGSGPNSGFGNAGTNNSGFFNTGVGSSGFQNGGSNNSGLQNAVGTVIAAGFGNT 330 Query 544 GAQTVGIANSGVLNSGFFNSGVHNSGGFNSENQRSGFGN 582 GAQTVGIANSGVLNSGFFNSGVHNSGGFNSENQRSGFGN Sbjct 331 GAQTVGIANSGVLNSGFFNSGVHNSGGFNSENQRSGFGN 369 >gi|183981484|ref|YP_001849775.1| PPE family protein [Mycobacterium marinum M] gi|183174810|gb|ACC39920.1| PPE family protein [Mycobacterium marinum M] Length=627 Score = 473 bits (1218), Expect = 3e-131, Method: Compositional matrix adjust. Identities = 361/641 (57%), Positives = 420/641 (66%), Gaps = 79/641 (12%) Query 1 MNYAVLPPELNSLRMFTGAGSAPMLAAAVAWDGLAAELGSAASSFGSVTSDLASQAWQGP 60 M++ +LPPE+NS+RMF GAG+APML AAVAW GLA ELG+AA SF SVTS LA Q WQG Sbjct 2 MSFLLLPPEINSVRMFAGAGAAPMLDAAVAWGGLAEELGTAARSFESVTSGLAGQVWQGA 61 Query 61 AAAAMAAAAAPYAGWLSAAAARAAGAAAQAKAVASAFEAARAATVHPLLVAANRNAFAQL 120 AAAAMAAAAAPY GWLSAAAARA GA+AQA+AVA FEAAR+A VHP+ VAANRN F QL Sbjct 62 AAAAMAAAAAPYTGWLSAAAARAVGASAQARAVAEVFEAARSAMVHPVAVAANRNVFVQL 121 Query 121 VMSNWFGLNAPLIAAVEGAYEQMWAADVAAMVGYHSGASAAAEQLVPFQQALQQ----LP 176 VMSN FG NAP IAA EGAYEQMWAADVAAMVGYH GASAAA L ++ LQQ LP Sbjct 122 VMSNLFGQNAPAIAATEGAYEQMWAADVAAMVGYHGGASAAAAALPSWEAGLQQWISGLP 181 Query 177 ---------------NLGIGNIGNANLGGGNTGDLNTGNGNIGNTNLGSGNRGDANLGSG 221 NLG+GNIG+ NLG GNTGD N G+GNIGN NLGSGN G +N+GSG Sbjct 182 GVGQLQAAASAIPAFNLGLGNIGDFNLGNGNTGDNNLGSGNIGNLNLGSGNTGGSNVGSG 241 Query 222 NIGNSNVGGGNVGNGNFGSGNGRAGLPGSGNVGNGNLGNSNLGSGNTGNSNVGFGNTGNN 281 N G+ N+G GN GN N GSGNG GS +SN+GSGN G+ N G GNTG++ Sbjct 242 NYGDGNLGSGNYGNSNLGSGNGVLSSVGS---------DSNVGSGNLGSHNFGNGNTGSS 292 Query 282 NVGTGNAGSGNIGAGNTGSSNWGFGNNGIGNIGFGNTGNGNIGFGLTGNNQVGIGGLNSG 341 N+G+GN G N G N GS+N+GF N G GN+GF NTGN NIGFGLTG+NQ+GIG LN+G Sbjct 293 NIGSGNIGDTNRGFANLGSNNFGFANLGDGNVGFANTGNNNIGFGLTGDNQMGIGALNTG 352 Query 342 SGNIGLFNSGTNNVGFFNSGNGNLGIGNSSDANVGIGNSGATVGPFVAGHNTGFGNSGSL 401 N G NSG+NN+GFFNSG+ N+G NS + N G NSG T NTGF NSGS+ Sbjct 353 LANTGFGNSGSNNIGFFNSGDHNVGFFNSGNGNYGFLNSGDT--------NTGFENSGSV 404 Query 402 NTGMGNAGGVNTGFGNGGAINLGFGNSGQLNAGSFNAGSINTGNFNSGQGNTGDFNAGVR 461 NTG+ NAG N G N G N GFGN G N G N+G NTG+FN+G NTGDFN+G Sbjct 405 NTGVQNAGAANFGAWNAGGGNFGFGNGGGGNFGFGNSGLSNTGSFNAGDVNTGDFNSGST 464 Query 462 NTGWSNSGLTNTGAFNAGSLNTGFGAVGTGSGPNSGFGNAGTNNSGFFNTGV-------- 513 NTGW NSG NTG FN+G+LNT + T +GPNSGFGN GT SGF N+GV Sbjct 465 NTGWGNSGDINTGLFNSGNLNTSIASSATQAGPNSGFGNTGTGLSGFNNSGVDTSGIQNA 524 Query 514 ---------------------GSSGFQNGGSNNSGLQNAVGTVIAAGFGNTGAQTVGIAN 552 G+SGF N G +G+ N+ G + G N G +GIAN Sbjct 525 QYETTKTLPPPAPPIPIHFNQGTSGFFNMGPGTAGIGNSGGG-LNRGLFNNGFLNIGIAN 583 Query 553 SG-------------VLNSGFFNSGVHNSGGFNSENQRSGF 580 SG SG F+SG SG FN+ + +SGF Sbjct 584 SGDNGFVYVAPLFTISFTSGVFSSGAFTSGFFNTMDNQSGF 624 Score = 120 bits (302), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 154/340 (46%), Positives = 188/340 (56%), Gaps = 52/340 (15%) Query 262 NLGSGNTGNSNVGFGNTGNNNVGTGNAGSGNIGAGNTGSSNWGFGNNGIGNIGFGNTGNG 321 NLG GN G+ N+G GNTG+NN+G+GN G+ N+G+GNTG SN G GN G GN+G GN GN Sbjct 197 NLGLGNIGDFNLGNGNTGDNNLGSGNIGNLNLGSGNTGGSNVGSGNYGDGNLGSGNYGNS 256 Query 322 NIGFG------LTGNNQVGIGGL--------NSGSGNIGLFNSGTNNVGFFNSGNGNLGI 367 N+G G + ++ VG G L N+GS NIG N G N GF N G+ N G Sbjct 257 NLGSGNGVLSSVGSDSNVGSGNLGSHNFGNGNTGSSNIGSGNIGDTNRGFANLGSNNFGF 316 Query 368 GNSSDANVGIGNSGATVGPFVAGHNTGFGNSGSLNTGMG--NAGGVNTGFGNGGAINLGF 425 N D NVG N+G +N GFG +G G+G N G NTGFGN G+ N+GF Sbjct 317 ANLGDGNVGFANTG--------NNNIGFGLTGDNQMGIGALNTGLANTGFGNSGSNNIGF 368 Query 426 GNSGQLNAGSFNAGSINTGNFNSGQGNTGDFNAGVRNTGWSNSGLTNTGAFNAGSLNTGF 485 FN+G N G FNSG GN G N+G NTG+ NSG NTG NAG+ N F Sbjct 369 ----------FNSGDHNVGFFNSGNGNYGFLNSGDTNTGFENSGSVNTGVQNAGAAN--F 416 Query 486 GAVGTGSGPNSGFGNAGTNNSGFFNTGVGSSGFQNGGSNNSGLQNAVGTVIAAGFGNTGA 545 GA N+G GN G N G N G G+SG N GS N+G N G N+G+ Sbjct 417 GAW------NAGGGNFGFGNGGGGNFGFGNSGLSNTGSFNAGDVNT-------GDFNSGS 463 Query 546 QTVGIANSGVLNSGFFNSGVHNSGGFNSENQ---RSGFGN 582 G NSG +N+G FNSG N+ +S Q SGFGN Sbjct 464 TNTGWGNSGDINTGLFNSGNLNTSIASSATQAGPNSGFGN 503 >gi|240171043|ref|ZP_04749702.1| PPE family protein [Mycobacterium kansasii ATCC 12478] Length=600 Score = 471 bits (1211), Expect = 2e-130, Method: Compositional matrix adjust. Identities = 363/614 (60%), Positives = 420/614 (69%), Gaps = 50/614 (8%) Query 1 MNYAVLPPELNSLRMFTGAGSAPMLAAAVAWDGLAAELGSAASSFGSVTSDLASQAWQGP 60 MN+++LPPELNS R+F GAG+APML+AA AWD LA EL +AASSFGSVT++LA Q+W GP Sbjct 1 MNFSMLPPELNSARIFAGAGTAPMLSAAAAWDRLANELSAAASSFGSVTAELAGQSWHGP 60 Query 61 AAAAMAAAAAPYAGWLSAAAARAAGAAAQAKAVASAFEAARAATVHPLLVAANRNAFAQL 120 AAAAMAAAA PY WL+ AA AA AA + + A+ +EAARAATVHP+LVAANR+ L Sbjct 61 AAAAMAAAATPYTAWLTTAATAAAEAAGRGRIAAAGYEAARAATVHPMLVAANRSRLVSL 120 Query 121 VMSNWFGLNAPLIAAVEGAYEQMWAADVAAMVGYHSGASAAAEQLVPFQQALQQLPNLGI 180 V SN FG NAP IAA+E YEQMWA D AAM GYH+ ASA A QL NLG+ Sbjct 121 VWSNVFGQNAPAIAAIEACYEQMWAQDAAAMSGYHALASAVAAQLPQI--------NLGL 172 Query 181 GNIGNANLGGGNTGDLNTGNGNIGNTNLGSGNRGDANLGSGNIGNSNVGGGN-------V 233 GNIG+ N+G GNTGD N G+GNIGNTNLGSGN G+ NLGSGN GNSN+G GN Sbjct 173 GNIGSLNMGSGNTGDFNLGSGNIGNTNLGSGNFGNTNLGSGNFGNSNLGSGNGNFLDAVQ 232 Query 234 GNGNFGSGNGRAGLPGSGNVGNG-NLGNSNLGSGNTGNSNVGFGNTGNNNVGTGNAGSGN 292 N N GSGN + G GN G G + GN+N+G+GN G+ N G GN G+ NVG+GN G+ N Sbjct 233 ANFNVGSGNNGSYNVGFGNSGAGSSAGNANVGNGNLGSQNFGNGNNGSQNVGSGNNGNVN 292 Query 293 IGAGNTGSSNWGFGNNGIGNIGFGNTGNGNIGFGLTGNNQVGI---GGLNSGSGNIGLFN 349 G GNTG NWG GN+G NIGFGNTGNGNIG GLTG++Q GI G LNSGSGNIGLFN Sbjct 293 TGYGNTGDRNWGLGNSGNNNIGFGNTGNGNIGIGLTGDDQRGINLTGWLNSGSGNIGLFN 352 Query 350 SGTNNVGFFNSGNGNLGIGNSSDANVGIGNSGATVGPFVAGHNTGFGNSGSLNTGMGNA- 408 SGT N+GFFNSG+GN+GI NS +N GI NSG +TG NSG NTG+ N+ Sbjct 353 SGTGNIGFFNSGSGNVGIANSGLSNYGIANSGQV--------DTGLWNSGDTNTGIANSG 404 Query 409 ----GGVNTGFGNGGAINLGFGNSGQLNAGSFNAGSINTGNFNSGQGNTGDFNAGVRNTG 464 GGVNTGFGNGG N GF N G NAGSFN+G+ NTG FNSG NTG FN+G NTG Sbjct 405 SGAFGGVNTGFGNGGYHNTGFANGGSFNAGSFNSGNHNTGGFNSGFINTGYFNSGPLNTG 464 Query 465 WSNSGLTNTGAFNAGSLNTGFGAVGTGSGPNSGFGNAGTNNSGFFNTGVGSSGFQN--GG 522 +NSG NTG FNAG LNTG G+ GP+SGFGN+G +SGFFN GV SSG N G Sbjct 465 LANSGGINTGLFNAGELNTGLGSSADQPGPSSGFGNSGAGSSGFFNDGVNSSGIGNVSGL 524 Query 523 SNNSGLQNAVGTVIAAGFGNTGA--QTVGIAN--SGVLNSGFF-------NSGVHN---- 567 +SG N G A GF N GA G N SG L+SGFF NSG+HN Sbjct 525 GLDSGFWNRGGGGRATGFFNAGAGFGVTGFFNSGSGALSSGFFNSGDTGSNSGLHNTGGN 584 Query 568 -SGGFNSENQRSGF 580 SGGFN+ +SGF Sbjct 585 SSGGFNTGTGQSGF 598 Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust. Identities = 88/230 (39%), Positives = 107/230 (47%), Gaps = 46/230 (20%) Query 175 LPNLGIGNIGNANLGGGNTGDLNTGNGNIGNTNLGSGNRGDANLGSGNIGNSNVG---GG 231 + N G+ N G AN G +TG N+G+ N G N GSG G N G GN G N G GG Sbjct 370 IANSGLSNYGIANSGQVDTGLWNSGDTNTGIANSGSGAFGGVNTGFGNGGYHNTGFANGG 429 Query 232 NVGNGNFGSGNGRAGLPGSG--NVGNGNLGNSNLGSGNTGNSNVGFGNTGNNNVGTGNA- 288 + G+F SGN G SG N G N G N G N+G N G N G N G G++ Sbjct 430 SFNAGSFNSGNHNTGGFNSGFINTGYFNSGPLNTGLANSGGINTGLFNAGELNTGLGSSA 489 Query 289 -------GSGNIGAGNTGSSNWGFGNNGIGNI-------GFGNTG---------NGNIGF 325 G GN GAG++G N G ++GIGN+ GF N G N GF Sbjct 490 DQPGPSSGFGNSGAGSSGFFNDGVNSSGIGNVSGLGLDSGFWNRGGGGRATGFFNAGAGF 549 Query 326 GLTGNNQVGIGGLNSG---SGNIGL--------------FNSGTNNVGFF 358 G+TG G G L+SG SG+ G FN+GT GFF Sbjct 550 GVTGFFNSGSGALSSGFFNSGDTGSNSGLHNTGGNSSGGFNTGTGQSGFF 599 >gi|240170430|ref|ZP_04749089.1| PPE family protein [Mycobacterium kansasii ATCC 12478] Length=652 Score = 468 bits (1203), Expect = 2e-129, Method: Compositional matrix adjust. Identities = 374/658 (57%), Positives = 427/658 (65%), Gaps = 91/658 (13%) Query 6 LPPELNSLRMFTGAGSAPMLAAAVAWDGLAAELGSAASSFGSVTSDLASQAWQGPAAAAM 65 +PPE+NSLR+F GAGSAPML AAVAWD LAAELGSAA SFGSVT+ LA QAWQG A+ AM Sbjct 1 MPPEINSLRIFAGAGSAPMLEAAVAWDSLAAELGSAAESFGSVTAGLAGQAWQGAASRAM 60 Query 66 AAAAAPYAGWLSAAAARAAGAAAQAKAVASAFEAARAATVHPLLVAANRNAFAQLVMSNW 125 AAAAPY+GWLS AAARAA A+AQAKAVASAFE AR A VHPL VAANRNAF +LV+SN Sbjct 61 VAAAAPYSGWLSTAAARAAAASAQAKAVASAFETARVAMVHPLAVAANRNAFVRLVLSNV 120 Query 126 FGLNAPLIAAVEGAYEQMWAADVAAMVGYHSGASAAAEQLVPFQQALQQ-------LPNL 178 FG NAP IA E YEQMWAADVAAMVGYH GASAAA L +Q+ LQQ LP Sbjct 121 FGQNAPAIALAEAQYEQMWAADVAAMVGYHGGASAAAAHLQSWQRGLQQALSGVLGLPAS 180 Query 179 G--------------------------IGNIGNANLGGGNTGDLNTGNGNIGNTNLGSGN 212 +GN GN LGGGNTGD N G+GNIGN NLGSGN Sbjct 181 AAAAAAQNPAAGSAAAGAAAGAAAATPVGNNGNLQLGGGNTGDSNLGSGNIGNANLGSGN 240 Query 213 RGDANLGSGNIGNSNVGGGNVGNGNFGSGNGRAGLPGSGNVGNGNLGNSNLGSGNTGNSN 272 G+ANLG GNIGN+N+G GN GN N G+GN GS N G+GN+G N G+GN G +N Sbjct 241 TGNANLGGGNIGNANLGSGNKGNINVGNGN-----FGSANFGDGNIGIRNAGAGNNGTAN 295 Query 273 VGFGNTGNNNVG--------------------TGNAGSGNIGAGNTGSSNWGFGNNGIGN 312 +G GN G N G GN GS N+G+GN G+ N G GN G N Sbjct 296 MGAGNFGTGNFGFGNIGNGNFGGGNIGPGNVGDGNNGSTNLGSGNLGNFNLGSGNLGSNN 355 Query 313 IGFGNTGNGNIGFGLTGNNQVGIGGLNSGSGNIGLFNSGTNNVGFFNSGNGNLGIGNSSD 372 +GFGN GN N+GFGLTGNNQVGIGGLNSG+ NIG NSG NN+GFFNSGN N+G NS + Sbjct 356 VGFGNHGNNNVGFGLTGNNQVGIGGLNSGNNNIGFGNSGDNNIGFFNSGNNNVGFFNSGN 415 Query 373 ANVGIGNSGATVGPF--VAGHNTGFGNSGSLNTGMGNAGGVNTGFGNGGAINLGFGNSGQ 430 NVG GNSGAT G F G NTGFGN+G NTG GNAG NTGFGN G +N G+GN+G Sbjct 416 GNVGFGNSGATNGGFWNAGGGNTGFGNAGFTNTGFGNAGDTNTGFGNAGRLNAGYGNAGI 475 Query 431 LNAGSFNAGSI----------NTGNFNSGQGNTGDFNAGVRNTGWSNSGLTNTGAFNAGS 480 LNAG NAG++ NTG NSG NTG NAG+ NTGW NSG NTG N+ + Sbjct 476 LNAGYGNAGNVNAGFGNAGIQNTGWENSGTVNTGFGNAGMTNTGWGNSGNINTGFLNSTN 535 Query 481 LNTGFGAVGTGSGPNSGFGNAGTNNSGFFNTGVG--------------SSGFQNGGSNNS 526 L+TG G +G+ GPNSGFG+ G NNSGFFNT G +SG N G++N Sbjct 536 LSTGVGNLGS-VGPNSGFGHTGANNSGFFNTSTGGFNSGFFNAGVGGVNSGINNSGASNV 594 Query 527 GLQNAVGTVIAAGFGNTGAQTVGIANSG----VLNSGFFNSGVHNSGGFNSENQRSGF 580 G+ N+ G GNTGA+ GIANS + SG NS +SGGFN+ SGF Sbjct 595 GINNS--GFANVGIGNTGARNAGIANSAPNIVIGTSGVANSATLSSGGFNTGTSLSGF 650 Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 153/337 (46%), Positives = 189/337 (57%), Gaps = 43/337 (12%) Query 256 GNLGNSNLGSGNTGNSNVGFGNTGNNNVGTGNAGSGNIGAGNTGSSNWGFGNNGIGNIGF 315 GN GN LG GNTG+SN+G GN GN N+G+GN G+ N+G GN G++N G GN G N+G Sbjct 209 GNNGNLQLGGGNTGDSNLGSGNIGNANLGSGNTGNANLGGGNIGNANLGSGNKGNINVGN 268 Query 316 GNTGNGNIGFGLTGNNQVGIGGLNSGSGNIGLFNSGTNNVGFFNSGNGNLGIGNSSDANV 375 GN G+ N G G G G G N+G+ N+G N GT N GF N GNGN G GN NV Sbjct 269 GNFGSANFGDGNIGIRNAGAG--NNGTANMGAGNFGTGNFGFGNIGNGNFGGGNIGPGNV 326 Query 376 GIGNSGATVGPFVAGHNTGFGNSGSLNTGMGNAGGVNTGFGNGGAINLGFGNSGQLNAGS 435 G GN+G+T N G GN G+ N G GN G N GFGN G N+GFG +G G Sbjct 327 GDGNNGST--------NLGSGNLGNFNLGSGNLGSNNVGFGNHGNNNVGFGLTGNNQVG- 377 Query 436 FNAGSINTGNFNSGQGNTGDFNAGVRNTGWSNSGLTNTGAFNAGSLNTGFGAVGTGSGPN 495 G +N+GN N G GN+GD N G+ NSG N G FN+G+ N Sbjct 378 --IGGLNSGNNNIGFGNSGD-----NNIGFFNSGNNNVGFFNSGN-------------GN 417 Query 496 SGFGNAGTNNSGFFNTGVGSSGFQNGGSNNSGLQNAVGTVIAAGFGNTGAQTVGIANSGV 555 GFGN+G N GF+N G G++GF N G N+G NA T GFGN G G N+G+ Sbjct 418 VGFGNSGATNGGFWNAGGGNTGFGNAGFTNTGFGNAGDT--NTGFGNAGRLNAGYGNAGI 475 Query 556 LN----------SGFFNSGVHNSGGFNSENQRSGFGN 582 LN +GF N+G+ N+G NS +GFGN Sbjct 476 LNAGYGNAGNVNAGFGNAGIQNTGWENSGTVNTGFGN 512 Score = 107 bits (266), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 152/418 (37%), Positives = 184/418 (45%), Gaps = 147/418 (35%) Query 177 NLGIGNIGNANLGGGNTGDLNTGNGNIGNTNLGSGNRGDANLGSGNIGNSNVGGGNVGNG 236 NLG GN GNANLGGGN G+ N G+GN GN N+G+GN G AN G GNIG N G GN G Sbjct 235 NLGSGNTGNANLGGGNIGNANLGSGNKGNINVGNGNFGSANFGDGNIGIRNAGAGNNGTA 294 Query 237 NFGSGN-------------------------GRAGLPGSGNVGNGNLGNSNLGSGNTGNS 271 N G+GN G GS N+G+GNLGN NLGSGN G++ Sbjct 295 NMGAGNFGTGNFGFGNIGNGNFGGGNIGPGNVGDGNNGSTNLGSGNLGNFNLGSGNLGSN 354 Query 272 NVGFGN------------------------------------------TGNNNVGTGNAG 289 NVGFGN +GNNNVG N+G Sbjct 355 NVGFGNHGNNNVGFGLTGNNQVGIGGLNSGNNNIGFGNSGDNNIGFFNSGNNNVGFFNSG 414 Query 290 SGNIGAGNTGSSNWGFGNNGIGNIGFGNTGNGNIGFGLTGNNQVGIGG---LNSGSGNIG 346 +GN+G GN+G++N GF N G GN GFGN G N GFG G+ G G LN+G GN G Sbjct 415 NGNVGFGNSGATNGGFWNAGGGNTGFGNAGFTNTGFGNAGDTNTGFGNAGRLNAGYGNAG 474 Query 347 LFNSG---------------TNNVGFFNSGNGNLGIGNSSDANVGIGNSG---------- 381 + N+G N G+ NSG N G GN+ N G GNSG Sbjct 475 ILNAGYGNAGNVNAGFGNAGIQNTGWENSGTVNTGFGNAGMTNTGWGNSGNINTGFLNST 534 Query 382 ---------ATVGPF-----------------------------VAGHNTGFGNSGSLNT 403 +VGP V G N+G NSG+ N Sbjct 535 NLSTGVGNLGSVGPNSGFGHTGANNSGFFNTSTGGFNSGFFNAGVGGVNSGINNSGASNV 594 Query 404 GMGNAGGVNTGFGNGGAINLGFGNSG--------------QLNAGSFNAGSINTGNFN 447 G+ N+G N G GN GA N G NS L++G FN G+ +G F+ Sbjct 595 GINNSGFANVGIGNTGARNAGIANSAPNIVIGTSGVANSATLSSGGFNTGTSLSGFFH 652 >gi|340625774|ref|YP_004744226.1| PPE family protein [Mycobacterium canettii CIPT 140010059] gi|340003964|emb|CCC43099.1| PPE family protein [Mycobacterium canettii CIPT 140010059] Length=646 Score = 463 bits (1192), Expect = 4e-128, Method: Compositional matrix adjust. Identities = 350/632 (56%), Positives = 412/632 (66%), Gaps = 74/632 (11%) Query 1 MNYAVLPPELNSLRMFTGAGSAPMLAAAVAWDGLAAELGSAASSFGSVTSDLASQAWQGP 60 +++A LPPE NSLRM+ GAGS P+LAAA AWDGLA EL +AASSFGSVTS+LA AWQGP Sbjct 2 VSFAWLPPETNSLRMYLGAGSQPLLAAAGAWDGLAEELHAAASSFGSVTSELAGGAWQGP 61 Query 61 AAAAMAAAAAPYAGWLSAAAARAAGAAAQAKAVASAFEAARAATVHPLLVAANRNAFAQL 120 A+AAMA+ A PYA WL AA A+A AA QA+A A AFE A A VHP +V ANR L Sbjct 62 ASAAMASVAGPYASWLIAAGAQAELAAGQARAAAGAFEEALAGVVHPAVVQANRVRTWLL 121 Query 121 VMSNWFGLNAPLIAAVEGAYEQMWAADVAAMVGYHSGASAAAEQLVPFQQALQQLPNLGI 180 +SN FG NAP IAA+E YEQMWA DVAAM GYH+ +SA A QL +QQAL + NLG+ Sbjct 122 AVSNVFGQNAPAIAAMEATYEQMWAQDVAAMAGYHAASSAVAAQLTSWQQALPNI-NLGL 180 Query 181 GNIGNANLGGGNTGDLNTGNGNIGNTNLGSGNRGDANLGSGNIGNSNVGGGNVGNGNFGS 240 GNIGN N+G GNTGD N GNGN GN N G GN + G I + NVG GN+GN N GS Sbjct 181 GNIGNLNVGNGNTGDYNLGNGNFGNANFGGGNGSAFH---GQISSFNVGSGNIGNFNLGS 237 Query 241 GNGRAGL-PGSGNVGNGNLGNSNLGSGNTGNSNVGFGNTGNNNVGTGNAGSGNIGA---- 295 GNG AG+ P S NVG+GN+GN+N+GSGN+G++NVGFGN GN N+G GNAG N G+ Sbjct 238 GNGNAGIGPSSFNVGSGNIGNANVGSGNSGDNNVGFGNLGNGNIGIGNAGP-NTGSPATP 296 Query 296 -----------------------------GNTGSSNWGFGNNGIGNIGFGNTGNGNIGFG 326 GN G+ N GFGN+G N G GNTG NIG G Sbjct 297 TPGNGNVGVGNGGNGNFGGGNTGNANIGLGNVGNGNVGFGNSGSHNFGLGNTGTNNIGIG 356 Query 327 LTGNNQVGIGGLNSGSGNIGLFNSGTNNVGFFNSGNGNLGIGNSSDANVGIGNSGATVGP 386 LTG+NQ+G GGLNSGSGNIG NSGT N+GFFNSG+GN G+GNS N G+ NSG Sbjct 357 LTGSNQIGFGGLNSGSGNIGFGNSGTGNIGFFNSGSGNFGVGNSGVTNTGVANSGNI--- 413 Query 387 FVAGHNTGFGNSGSLNTGMGNAGGVNTGFGNGGAINLGFGNSGQLNAGSFNAGSINTGNF 446 NTGFGNSG +NTG GNA VNTGF N G N G GN+G N G+FN G INTG+F Sbjct 414 -----NTGFGNSGLINTGFGNASTVNTGFANSGGANTGIGNAGDYNTGNFNGGIINTGSF 468 Query 447 NS----------GQGNTGDFNAGVRNTGWSNSGLTNTGAFNAGSLNTGFGAVGTGSGPNS 496 NS G N+G FN+G+ NTG++NSG NTG FNAG+LNTGFG G G NS Sbjct 469 NSGAFNSGSFNGGNANSGFFNSGLTNTGFANSGNINTGGFNAGNLNTGFGNTADGPGENS 528 Query 497 GFGNAGTNNSGFFNTGVGSSGFQNGGSNNSGLQNAVGTVIAAGFGNTGAQTVGIANSGVL 556 GFGN G+ NSGF N+G G+SG N +GT+ +GFGN+G G NSG + Sbjct 529 GFGNTGSGNSGFNNSGKGNSGAYN-----------LGTLQISGFGNSGQSVSGYNNSGNI 577 Query 557 NSGFFNSGVHN------SGGFNSENQRSGFGN 582 SGF N G + SG N+ +SGFGN Sbjct 578 ISGFGNKGTGSFNLGFISGFGNTGELQSGFGN 609 >gi|240173028|ref|ZP_04751686.1| PPE family protein [Mycobacterium kansasii ATCC 12478] Length=591 Score = 453 bits (1165), Expect = 4e-125, Method: Compositional matrix adjust. Identities = 363/603 (61%), Positives = 416/603 (69%), Gaps = 36/603 (5%) Query 1 MNYAVLPPELNSLRMFTGAGSAPMLAAAVAWDGLAAELGSAASSFGSVTSDLASQAWQGP 60 MN+ +LPPE+NS R++ GAGS PMLAAA AWDGLA ELGSAA SFGSVTS L WQGP Sbjct 4 MNFVILPPEINSARVYLGAGSGPMLAAAAAWDGLAGELGSAAGSFGSVTSGLTGAVWQGP 63 Query 61 AAAAMAAAAAPYAGWLSAAAARAAGAAAQAKAVASAFEAARAATVHPLLVAANRNAFAQL 120 AA AM AAAPY GWLSAAAA A GAA QA+ SAFEAA AATVHP+ VAANRN L Sbjct 64 AATAMVEAAAPYVGWLSAAAAHAQGAAGQARTAVSAFEAAVAATVHPVAVAANRNQLVSL 123 Query 121 VMSNWFGLNAPLIAAVEGAYEQMWAADVAAMVGYHSGASAAAEQLVP----FQQALQQLP 176 V+SN FG NAP IAA E AYEQMWA DVAAMVGYH A+A QL P QQALQ LP Sbjct 124 VVSNLFGQNAPAIAAAETAYEQMWAQDVAAMVGYHGEAAAVVAQLAPMQSGLQQALQTLP 183 Query 177 ----NLGIGNIGNANLGGGNTGDLNTGNGNIGNTNLGSGNRGDANLGSGNIGNSNVGGGN 232 NLG+GN G+ NLGGGN GD N G+GN G+ N+GSGN G+ NLG+GN GNSNVG GN Sbjct 184 GMLANLGVGNAGSGNLGGGNHGDNNLGSGNNGSHNVGSGNAGNTNLGNGNSGNSNVGNGN 243 Query 233 VGNGNFGSGNGRAGLPGSGNVGNGNLGNSNLGSGNTGNSNVGFGNTGNNNVGTGNAGSGN 292 G+ NFGSGN G N GNGN+G N+GSGN GN N+G GN GN+NVG+GN G N Sbjct 244 RGDQNFGSGN-----SGGTNTGNGNIGTGNVGSGNLGNGNLGNGNLGNSNVGSGNRGDNN 298 Query 293 IGAGNTGSSNWGFGNNGIGNIGFGNTGNGNIGFGLTGNNQVGIGGLNSGSGNIGLFNSGT 352 +G GN GSSN G N G + GFGNTGN +IGFGLTG+NQVG G LNSGSGNIG NSG+ Sbjct 299 MGFGNRGSSNIGVSNTGNHDFGFGNTGNNDIGFGLTGDNQVGFGALNSGSGNIGFGNSGS 358 Query 353 NNVGFFNSGNGNLGIGNSSDANVGIGNSGA-TVGPFVAGH-NTGFGNSGSLNTGMGNAGG 410 NVGFFNSG GN+G+ NS + G NSG+ G +G NTGF N+G + G+ NAG Sbjct 359 GNVGFFNSGTGNVGLFNSGGHSFGAENSGSFNTGLTNSGQGNTGFVNAGFNSLGLANAGA 418 Query 411 VNTGFGNGGAINLGFGNSGQLNAGSFNAGSINTGNFNSGQGNTGDFNAGVRNTGWSNSGL 470 N G NGG+ N GFGNSG N GS+NAGSI NTGDFNAG NTGW+NSG Sbjct 419 NNMGVFNGGSQNFGFGNSGFQNTGSWNAGSI----------NTGDFNAGSINTGWANSGA 468 Query 471 TNTGAFNAGSLNTGFGAVGTGSG-PNSGFGNAGTNNSGFFNTGVGSSGFQNGG-SNNSGL 528 +NTG F++GSLNTGFG++ T G NSGFG G ++SGFFN+G +SGFQN G + SG Sbjct 469 SNTGGFDSGSLNTGFGSMLTPVGAKNSGFGTTGLDSSGFFNSGGDTSGFQNTGLAFESGF 528 Query 529 QNAVGTV---------IAAGFGNTGAQTVGIANSGVLNSGFFNSGVHNSGGFNSENQRSG 579 N+ AG GNTG +GIANS V NSG NSG +SG FN + +SG Sbjct 529 HNSGNGNNAGINNTGSFLAGIGNTGFDNIGIANSNVFNSGIGNSGNDDSGFFNKTDAQSG 588 Query 580 FGN 582 F N Sbjct 589 FFN 591 >gi|183981566|ref|YP_001849857.1| PPE family protein [Mycobacterium marinum M] gi|183174892|gb|ACC40002.1| PPE family protein [Mycobacterium marinum M] Length=679 Score = 452 bits (1162), Expect = 9e-125, Method: Compositional matrix adjust. Identities = 376/677 (56%), Positives = 420/677 (63%), Gaps = 119/677 (17%) Query 1 MNYAVLPPELNSLRMFTGAGSAPMLAAAVAWDGLAAELGSAASSFGSVTSDLASQAWQGP 60 MN++VLPPE+NSLR+F G GS PMLAAA AWDGLA EL +AA++F SVTS L +WQGP Sbjct 1 MNFSVLPPEINSLRIFAGTGSGPMLAAAAAWDGLADELSTAAAAFSSVTSGLTGGSWQGP 60 Query 61 AAAAMAAAAAPYAGWLSAAAARAAGAAAQAKAVASAFEAARAATVHPLLVAANRNAFAQL 120 AAAAMAAAAAPYAGWL AAARA +AQAK VA+AFEA RAATVHP+LVAANR L Sbjct 61 AAAAMAAAAAPYAGWLGLAAARAGDVSAQAKVVAAAFEAVRAATVHPMLVAANRAQLVSL 120 Query 121 VMSNWFGLNAPLIAAVEGAYEQMWAADVAAMVGYHSGASAAAEQLVPFQQALQQL----- 175 V SN GLNAP IA E YE MWAADVAAMVGYH GASAAA QL P+QQ LQ L Sbjct 121 VRSNLLGLNAPAIATTEAEYEAMWAADVAAMVGYHGGASAAAAQLAPWQQWLQSLPGLPG 180 Query 176 ---------------PNLGIGN---------IGNANLGGGNTGDLNTGNGNIGNTNLGSG 211 PNLGIGN +G NLG GNTG+ N G+GN GN NLGSG Sbjct 181 QLAGSATAAAAANGWPNLGIGNTDSNVGSGDVGTQNLGSGNTGNTNLGSGNTGNGNLGSG 240 Query 212 NRGDANLGSGNIGNSNVGGGNVGNGNFGSGN--------GRAGLPGSGNVGNGNLGNSNL 263 NRGD+N+GSGN+GNSN G GN GN N GSGN G AGL G+ GN N GN NL Sbjct 241 NRGDSNVGSGNLGNSNWGSGNTGNYNQGSGNHGDNNVGFGNAGLGGT--AGNDNFGNGNL 298 Query 264 GSGNTGNSNVGFGNTGNNNVGTGNAGSGNIGAGNTGSSNWGFGNNGIGNIGFGNTGNGNI 323 GSGNTG+ GN GN N G GN G N+G N GS N GFGN G N+GFGNTG+GNI Sbjct 299 GSGNTGS-----GNIGNQNQGWGNQGDNNVGLANRGSDNMGFGNTGNNNVGFGNTGSGNI 353 Query 324 GFGLTGNNQVGIGGLNSGSGNIGLFNSGTNNVGFFNSGNGNLGIGNSSDANVGIGNSGAT 383 G GLTGNNQ+G GGLNSGSGN+G NSGT NVGFFNSG GN GIGNS + G GNSG Sbjct 354 GIGLTGNNQMGFGGLNSGSGNLGFGNSGTGNVGFFNSGVGNWGIGNSGAIDTGFGNSG-- 411 Query 384 VGPFVAGHNTGFGNSGSLNTGMGNAG-----GVNTGFGNGGAINLGFGNSGQLNAGSFNA 438 F+ +TG GNSG+LNTG+GN+G G N GFGN G N G GNSG NAGSFN+ Sbjct 412 ---FI---DTGIGNSGALNTGIGNSGLNAGSGFNVGFGNSGINNFGVGNSGSFNAGSFNS 465 Query 439 ---------------GSINTGNFNSGQGNTGDFNAGVRNTGWSNSGLTNTGAFNAGSLNT 483 G N G+FNSG NTG FNAG NTG+ N+G NTG +N+G LNT Sbjct 466 STSNLGSFNSGNFVLGGFNVGSFNSGAHNTGAFNAGGYNTGFWNAGDINTGMWNSGDLNT 525 Query 484 GFGAVGTGSGPNSGFGNAGTNNSGFFNTGVG--SSGFQNGGS--NNSGLQNAVGTVIAAG 539 G G+ T + NSGF NAG+ +SG FN G G +SGF N GS NSG N AG Sbjct 526 GLGSAITQTVANSGFFNAGSTSSGLFNVGSGGHNSGFVNVGSGGYNSGFFNLGAGGSNAG 585 Query 540 FGNTGAQ-------------------------------------------TVGIANSGVL 556 F N+GA T+G NSGVL Sbjct 586 FFNSGAGGGNTGLLNLGNGGNNTGFFNVGNGGYNTGFVNAGSDGSNAGFFTLGGYNSGVL 645 Query 557 NSGFFNSGVHNSGGFNS 573 N G NSGV NSG NS Sbjct 646 NIGSLNSGVLNSGTANS 662 Score = 83.6 bits (205), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 109/252 (44%), Positives = 130/252 (52%), Gaps = 42/252 (16%) Query 333 VGIGGLNSGSGNIGLFNSGTNNVGFFNSGNGNLGIGNSSDANVGIGNSGATVGPFVAGHN 392 +GIG +S N+G + GT N+G N+GN NLG GN+ + N+G GN G + N Sbjct 198 LGIGNTDS---NVGSGDVGTQNLGSGNTGNTNLGSGNTGNGNLGSGNRGDS--------N 246 Query 393 TGFGNSGSLNTGMGNAGGVNTGFGNGGAINLGFGNSGQLNAGSFNAGSINTGNFNSGQGN 452 G GN G+ N G GN G N G GN G N+GFGN+G AG+ N GN N G GN Sbjct 247 VGSGNLGNSNWGSGNTGNYNQGSGNHGDNNVGFGNAGLGGT----AGNDNFGNGNLGSGN 302 Query 453 TGDFNAGVRNTGWSNSGLTNTGAFNAGSLNTGFGAVGTGSGPNSGFGNAGTNNSGFFNTG 512 TG N G +N GW N G N G N GS N GFGN G NN GF NTG Sbjct 303 TGSGNIGNQNQGWGNQGDNNVGLANRGS-------------DNMGFGNTGNNNVGFGNTG 349 Query 513 VGSSGFQNGGSNNSGLQNAVGTVIAAGFG--NTGAQTVGIANSGVLNSGFFNSGVHNSGG 570 G+ G G+N GFG N+G+ +G NSG N GFFNSGV N G Sbjct 350 SGNIGIGLTGNN------------QMGFGGLNSGSGNLGFGNSGTGNVGFFNSGVGNWGI 397 Query 571 FNSENQRSGFGN 582 NS +GFGN Sbjct 398 GNSGAIDTGFGN 409 Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 130/336 (39%), Positives = 156/336 (47%), Gaps = 85/336 (25%) Query 176 PNLGIGNIGNANLGGGNTGDLNTGNGNIGNTNLGSG--NRGDANLGSGNIGNSNVGGGNV 233 N+G GN GN N+G GNTG N G G GN +G G N G NLG GN G NVG N Sbjct 331 DNMGFGNTGNNNVGFGNTGSGNIGIGLTGNNQMGFGGLNSGSGNLGFGNSGTGNVGFFNS 390 Query 234 GNGNFGSGNGRAGLPGSGN-----VGNGNLGNSNLGSGNTGNS-----NVGFGNTGNNNV 283 G GN+G GN A G GN G GN G N G GN+G + NVGFGN+G NN Sbjct 391 GVGNWGIGNSGAIDTGFGNSGFIDTGIGNSGALNTGIGNSGLNAGSGFNVGFGNSGINNF 450 Query 284 GTGNAGSGNIGAGNTGSSNWGFGNNG--------IG-----------------NIGFGNT 318 G GN+GS N G+ N+ +SN G N+G +G N GF N Sbjct 451 GVGNSGSFNAGSFNSSTSNLGSFNSGNFVLGGFNVGSFNSGAHNTGAFNAGGYNTGFWNA 510 Query 319 GNGNIGFGLTGNNQVGIGG-----------LNSGSGNIGLFN--SGTNNVGFFNSGNG-- 363 G+ N G +G+ G+G N+GS + GLFN SG +N GF N G+G Sbjct 511 GDINTGMWNSGDLNTGLGSAITQTVANSGFFNAGSTSSGLFNVGSGGHNSGFVNVGSGGY 570 Query 364 -----NLGIGNSSDANVGIGNSGATVGPFVA------------------GHNTGFGNSGS 400 NLG G S N G NSGA G G+NTGF N+GS Sbjct 571 NSGFFNLGAGGS---NAGFFNSGAGGGNTGLLNLGNGGNNTGFFNVGNGGYNTGFVNAGS 627 Query 401 -------LNTGMGNAGGVNTGFGNGGAINLGFGNSG 429 G N+G +N G N G +N G NSG Sbjct 628 DGSNAGFFTLGGYNSGVLNIGSLNSGVLNSGTANSG 663 >gi|118616670|ref|YP_905002.1| PPE family protein [Mycobacterium ulcerans Agy99] gi|118568780|gb|ABL03531.1| PPE family protein [Mycobacterium ulcerans Agy99] Length=608 Score = 452 bits (1162), Expect = 1e-124, Method: Compositional matrix adjust. Identities = 366/621 (59%), Positives = 415/621 (67%), Gaps = 52/621 (8%) Query 1 MNYAVLPPELNSLRMFTGAGSAPMLAAAVAWDGLAAELGSAASSFGSVTSDLASQAWQGP 60 MN+ +LPPE+NS RMF GAGS PML+AA+AWDGLA ELGSAA SFGSVTS L +WQG Sbjct 1 MNFPMLPPEINSARMFAGAGSGPMLSAAMAWDGLAVELGSAAESFGSVTSGLVGSSWQGA 60 Query 61 AAAAMAAAAAPYAGWLSAAAARAAGAAAQAKAVASAFEAARAATVHPLLVAANRNAFAQL 120 AA AM+AAAAPY WL+AAA RA AA QAK V SAFEAARAA +HPL VAANRNA QL Sbjct 61 AATAMSAAAAPYVSWLNAAAVRAGEAALQAKEVVSAFEAARAAMIHPLAVAANRNALVQL 120 Query 121 VMSNWFGLNAPLIAAVEGAYEQMWAADVAAMVGYHSGASAAAEQLVPFQQALQQLP---- 176 V++N FG NAP IAA EG+YEQMWAADVAAM+GYH GASAAA L +QQALQ L Sbjct 121 VLTNLFGQNAPAIAAAEGSYEQMWAADVAAMLGYHGGASAAASGLASWQQALQGLAGPAA 180 Query 177 --------------NLGIGNIGNANLGGGNTGDLNTGNGNIGNTNLGSGNRGDANLGSGN 222 NL IGNIG NLGGGN G+LN G GN GN NLGSGN G NLGSGN Sbjct 181 SVILGLSIGNTGVGNLSIGNIGVFNLGGGNAGNLNLGGGNTGNANLGSGNNGFFNLGSGN 240 Query 223 IGNSNVGGGNVGNGNFGSGNGRAGLPGSGNVGNGN-LGNSNLGSGN-TGNSNVGFGNTGN 280 GN+N G GN GN N+GSGN G+ NVG GN LG N G GN G++N+G GN GN Sbjct 241 TGNTNFGNGNRGNLNWGSGN-----LGNANVGFGNFLGQGNFGFGNRVGDANLGSGNLGN 295 Query 281 NNVGTGNAGSGNIGAGNTGSSNWGFGNNGIGNIGFGNTGNGNIGFGLTGNNQVGI--GGL 338 N G GN G N+G+GN G SN GFGN G N+GFGN G+ NIGFGLTGNNQVGI GL Sbjct 296 ANFGNGNLGDTNLGSGNNGFSNVGFGNLGSNNLGFGNNGDNNIGFGLTGNNQVGINFAGL 355 Query 339 NSGSGNIGLFNSGTNNVGFFNSGNGNLGIGNSSDANVGIGNSGATVGPFVAGHNTGFGNS 398 N G GNI L NSG NNVGFFNSG+ N+G NS D N G NSG T NTGF N+ Sbjct 356 NGGIGNIDLGNSGDNNVGFFNSGSNNVGFFNSGDRNFGFANSGDT--------NTGFWNA 407 Query 399 GSLNTGMGNAGGVNTGFGNGGAINLGFGNSGQLNAGSFNAGSINTGNF------NSGQGN 452 G +NTG GN G N GFGNGGA N+G GN G N G N+G+ NTG+F GN Sbjct 408 GRVNTGFGNGGNFNLGFGNGGAANVGVGNGGGGNLGFGNSGTENTGSFNSGGDNGRNGGN 467 Query 453 TGDFNAGVRNTGWSNSGLTNTGAFNAGSLNTGFGAVGTGSGPNSGFGNAGTNNSGFFNTG 512 TG FN+G NTG+ NSG TNTG FNAGS+NTG G+ T G SGFGN G SGF N+G Sbjct 468 TGSFNSGYVNTGFFNSGSTNTGLFNAGSVNTGIGSPDTQPGSISGFGNTGAGVSGFNNSG 527 Query 513 VGSSGFQNGGSN---NSGLQNAVGTVIA--------AGFGNTGAQTVGIANSGVLNSGFF 561 +SGF N + SG+ N + AG N+G T GIANSG L+SG Sbjct 528 DATSGFMNVATTFGFASGINNVGDYQVGLFNTGFGNAGIANSGNATFGIANSGALSSGIS 587 Query 562 NSGVHNSGGFNSENQRSGFGN 582 NSG ++SGGFN+ + +SGF N Sbjct 588 NSGTNSSGGFNTGDDQSGFFN 608 >gi|183981425|ref|YP_001849716.1| PPE family protein [Mycobacterium marinum M] gi|183174751|gb|ACC39861.1| PPE family protein [Mycobacterium marinum M] Length=632 Score = 451 bits (1161), Expect = 1e-124, Method: Compositional matrix adjust. Identities = 359/608 (60%), Positives = 407/608 (67%), Gaps = 57/608 (9%) Query 1 MNYAVLPPELNSLRMFTGAGSAPMLAAAVAWDGLAAELGSAASSFGSVTSDLASQAWQGP 60 M++AVLPPE+NSLR+F GAGSAPML AAVAWDGL+AELG+AA SF SVTS L QAWQG Sbjct 1 MSFAVLPPEINSLRIFAGAGSAPMLEAAVAWDGLSAELGTAAESFASVTSGLTGQAWQGA 60 Query 61 AAAAMAAAAAPYAGWLSAAAARAAGAAAQAKAVASAFEAARAATVHPLLVAANRNAFAQL 120 AA AMAA AAPY+ WLSAAAARAAGAA QAK VASAFEAAR+A VHPL VAANRN F QL Sbjct 61 AAKAMAAVAAPYSSWLSAAAARAAGAAGQAKMVASAFEAARSAMVHPLAVAANRNVFVQL 120 Query 121 VMSNWFGLNAPLIAAVEGAYEQMWAADVAAMVGYHSGASAAAEQLVPFQQALQQLP---- 176 VMSN FG NAP IAA EG YE+MWAADVAAMVGYH GASAAA L +QQAL LP Sbjct 121 VMSNLFGQNAPAIAATEGTYEEMWAADVAAMVGYHGGASAAASGLPSWQQALSGLPGIGQ 180 Query 177 ---------------NLGIGNIGNANLGGGNTGDLNTGNGNIGNTNLGSGNRGDANLGSG 221 N G+GN G NLGGGN G N G+GN GN NLG GN G+ NLG G Sbjct 181 AAAAPAAALFNLPTVNTGLGNSGQWNLGGGNNGSFNLGSGNFGNLNLGGGNIGNLNLGGG 240 Query 222 NIGNSNVGGGNVGNGNFGSGNGRAGLPGSGNVGNGNLGNSNLGSGNTGNSN----VGFGN 277 N G +N+G GN+GN NFGSGN G GN+G+GN G N GSGN GN+N V F + Sbjct 241 NFGFANLGNGNIGNTNFGSGNNGNLNFGGGNLGSGNFGLGNFGSGNFGNANGMDPVSF-S 299 Query 278 TGNNNVGTGNAGSGNIGAGNTGSSNWGFGNNGIGNIGFGNTGNGNIGFGLTGNNQVGIGG 337 TG NN+G N G+ N+G+ N G SN G N G N GFGN GN NIGFGLTG+NQVGIG Sbjct 300 TG-NNIGDANLGAFNLGSANIGLSNIGLANIGNNNFGFGNVGNNNIGFGLTGDNQVGIGS 358 Query 338 LNSGSGNIGLFNSGTNNVGFFNSGNGNLGIGNSSDANVGIGNSGATVGPFVAGHNTGFGN 397 LN+G+GN G NSG NN+GFFNSG+GN+G+ NS D N G GNSG G N+GF N Sbjct 359 LNAGTGNFGFGNSGDNNIGFFNSGSGNVGVFNSGDGNTGFGNSG--------GVNSGFWN 410 Query 398 SGSLNTGMGNAGGVNTGFGNGGAINLGFGNSGQLNAGSFNAGSINTGNFNSG------QG 451 SG LNTG GNAG N GF N G+ N+G N+G N GS NAG NTG FNSG G Sbjct 411 SGGLNTGFGNAGANNLGFSNAGSSNVGDSNAGGSNMGSGNAGYSNTGFFNSGGSATFIGG 470 Query 452 NTGDFNAGVRNTGWSNSGLTNTGAFNAGSLNTGFGAVGTGSG-PNSGFGNAGTNNSGFFN 510 NTG FN+G NTG N+G NTG N+G NT G+ T +G SGF N G N SGF N Sbjct 471 NTGFFNSGDLNTGGGNAGSVNTGFLNSGDFNTTVGSADTPAGATQSGFWNTGDNVSGFNN 530 Query 511 T-----GVGSSGFQNGGSNNSGLQNAVGTVIAAGFGNTGAQTVGIANSGVLNSGFFNSGV 565 T G G SGFQN N+G + + +GFGNTG VG N+G FN+GV Sbjct 531 TNDAMFGGGVSGFQN---MNTGFFS-----VGSGFGNTGEYQVGFNNAGTG----FNTGV 578 Query 566 HNSGGFNS 573 N+G FN+ Sbjct 579 GNTGSFNT 586 Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust. Identities = 103/290 (36%), Positives = 118/290 (41%), Gaps = 107/290 (36%) Query 177 NLGIGNIGNANLGGGNTGD-------LNTGNGNIGNTNLGSGNRGDANLGSGNIGNSNVG 229 N G GN+GN N+G G TGD LN G GN G N G N G N GSGN+G N G Sbjct 333 NFGFGNVGNNNIGFGLTGDNQVGIGSLNAGTGNFGFGNSGDNNIGFFNSGSGNVGVFNSG 392 Query 230 GGNVGNGNFG-------------SGNGRAGL-------PGSGNVGNGNLGNSNLGSGNTG 269 GN G GN G +G G AG GS NVG+ N G SN+GSGN G Sbjct 393 DGNTGFGNSGGVNSGFWNSGGLNTGFGNAGANNLGFSNAGSSNVGDSNAGGSNMGSGNAG 452 Query 270 NSNVGFGNTGNN------NVGTGNAGSGNIGAGNTGSSNWGFGNNGIGNI---------- 313 SN GF N+G + N G N+G N G GN GS N GF N+G N Sbjct 453 YSNTGFFNSGGSATFIGGNTGFFNSGDLNTGGGNAGSVNTGFLNSGDFNTTVGSADTPAG 512 Query 314 ----GFGNTGNGNI------------------------------GFGLTGNNQVGIG--- 336 GF NTG+ N+ GFG TG QVG Sbjct 513 ATQSGFWNTGD-NVSGFNNTNDAMFGGGVSGFQNMNTGFFSVGSGFGNTGEYQVGFNNAG 571 Query 337 -GLNSGSGNIG-------------------------LFNSGTNNVGFFNS 360 G N+G GN G L NSG ++ G FN Sbjct 572 TGFNTGVGNTGSFNTGFNVTGSGSSGFGHSGDGSSGLANSGDSSSGAFNE 621 >gi|240169655|ref|ZP_04748314.1| PPE family protein [Mycobacterium kansasii ATCC 12478] Length=1081 Score = 444 bits (1143), Expect = 2e-122, Method: Compositional matrix adjust. Identities = 368/652 (57%), Positives = 419/652 (65%), Gaps = 86/652 (13%) Query 1 MNYAVLPPELNSLRMFTGAGSAPMLAAAVAWDGLAAELGSAASSFGSVTSDLASQAWQGP 60 MN++VLPPE+NSLRMF+GAGSAPML AA AWDGL+AELGSAASSF SVT LA QAWQGP Sbjct 1 MNFSVLPPEINSLRMFSGAGSAPMLQAATAWDGLSAELGSAASSFSSVTFGLAGQAWQGP 60 Query 61 AAAAMAAAAAPYAGWLSAAAARAAGAAAQAKAVASAFEAARAATVHPLLVAANRNAFAQL 120 AA AMAAAAAPYAGWL+ AAARAAGAA QA AVAS F+AAR A V P++VAANRN F QL Sbjct 61 AAQAMAAAAAPYAGWLNVAAARAAGAADQANAVASVFDAARTAMVRPVVVAANRNEFVQL 120 Query 121 VMSNWFGLNAPLIAAVEGAYEQMWAADVAAMVGYHSGASAAAEQLVPFQQALQQLPNLGI 180 VMSN FG NAP IAA E YE MWA+ VA M GYHSG S A QL ++ ALQ + Sbjct 121 VMSNLFGQNAPAIAAAEAEYEGMWASAVATMAGYHSGVSVIAGQLASWRGALQGVA---- 176 Query 181 GNIGNA---------------------------------NLGGGNTGDLNTGNGNIGNTN 207 G +G A N G GNTG N G GNIGN N Sbjct 177 GQVGGAVSASPIGAAAAAVGSTVAASPVAAAAASILPAINTGFGNTGAWNVGIGNIGNYN 236 Query 208 LGSGNRGDANLGSGNIGNSNVGGGNVGNGNFGSGNGRA------GLPGSGNVGNGNLGNS 261 LGSGN GD N GSGN GN+N+G GNV NGN GSGN R G GS N+GNGN G+ Sbjct 237 LGSGNHGDLNFGSGNYGNANLGSGNVANGNLGSGN-RGFFNLGNGNFGSLNLGNGNRGDL 295 Query 262 NLGSGNT----GNSNVGFGNTGN----------NNVGTGNAGSGNIGAGNTGSSNWGFGN 307 N GSGNT GN N GFGN GN NN G GN G N+G+GN GS N GFGN Sbjct 296 NFGSGNTGPVDGNRNFGFGNWGNANLGSGNHSSNNFGFGNWGPMNMGSGNHGSYNIGFGN 355 Query 308 NGIGNIGFGNTGNGNIGFGLTGNNQVGIGGLNSGSGNIGLFNSGTNNVGFFNSGNGNLGI 367 G N+GFGN GN NIGFGLTG+NQVGIGGLNSG GNIG NSG NN+G FNSG+ N G Sbjct 356 FGSKNLGFGNHGNNNIGFGLTGDNQVGIGGLNSGIGNIGFGNSGNNNIGLFNSGDNNFGF 415 Query 368 GNSSDANVGIGNSGATVGPFVAGHNTGFGNSGSLNTGMGNAGGVNTGFGNGGAINLGFGN 427 NS N G NSG NTGF N+G+ NTG GN G ++ GFGNGG ++GFGN Sbjct 416 FNSGSGNFGFANSGNI--------NTGFWNAGNWNTGAGNGGNLDFGFGNGGIKDVGFGN 467 Query 428 SGQLNAGSFNAGSINTGNFNSG-------QGNTGDFNAGVRNTGWSNSGLTNTGAFNAGS 480 G N G FN+G NTG+FNSG GN+G FN+ NTG+ NSG TNTG FNAGS Sbjct 468 GGSDNMGFFNSGDFNTGDFNSGGGTFGTSAGNSGSFNSSPNNTGFFNSGATNTGLFNAGS 527 Query 481 LNTGFGAVGTGSGPNSGFGNAGTNNSGFFNTGVGSSGFQN---GGSNNSGLQNA------ 531 +NTGFG+ G SGF N GT+ SGF NTG +SGFQN G NSG+ N+ Sbjct 528 VNTGFGSSIDQPGSVSGFNNTGTDVSGFNNTGPATSGFQNTNTGLGLNSGIGNSGDGDAG 587 Query 532 ---VGTVIAAGFGNTGAQTVGIANSGVLNSGFFNSGVHNSGGFNSENQRSGF 580 GT I +G+ N G G+A+SG L SG N+G+ +SG FN+ + +SGF Sbjct 588 WFNSGT-INSGWFNKGTNDFGLAHSGELVSGIANAGMFSSGFFNTGDNQSGF 638 Score = 283 bits (723), Expect = 8e-74, Method: Compositional matrix adjust. Identities = 240/419 (58%), Positives = 278/419 (67%), Gaps = 29/419 (6%) Query 177 NLGIGNIGNANLGGGNTGDLNTGNGNIGNTNLGSGNRGDANLGSGNIGNSNVGGGNVGNG 236 NLG+GNIG+ N G GNTGD N G+GN G N+GSGN G+ANLGSGN G N+G GN+G Sbjct 675 NLGMGNIGDFNPGSGNTGDFNFGSGNTGGFNVGSGNFGNANLGSGNRGFFNLGSGNLGTA 734 Query 237 NFGSGNGRAGLPGSGNVGNGNLGNSNLGSGNTGNSNVGFGNTGNNNVGTGNAGSGNIGAG 296 NFG GN G N+G GNL N N+G GN G NVG N G+ N G GN GS N+G+G Sbjct 735 NFGIGN-----FGDLNLGFGNLNNGNVGFGNFGAGNVGSANRGSFNFGGGNFGSSNVGSG 789 Query 297 NTGSSNWGFGNNGIGNIGFGNTGNGNIGFGLTGNNQVGIGGLNSGSGNIGLFNSGTNNVG 356 N GS N GFGN G N GFGN GN NIGFGLTG+N +GIGGLN+G+ NIG NSG NN+G Sbjct 790 NHGSHNLGFGNLGNNNFGFGNHGNNNIGFGLTGDNMIGIGGLNAGANNIGFGNSGNNNIG 849 Query 357 FFNSGNGNLGIGNSSDANVGIGNSGATVGPFVAGHNTGFGNSGSLNTGMGNAGGVNTGFG 416 FFNSG+ N+G NS +AN G NSG+ +TGF N+GS NTG GN N GFG Sbjct 850 FFNSGDNNVGFFNSGNANYGFANSGSV--------DTGFWNTGSHNTGFGNGSDSNFGFG 901 Query 417 NGGAINLGFGNSGQLNAGSFNAGSINTGNFNSGQG---NTGDFNAGVRNTGWSNSGLTNT 473 N G N+G GNSG N G N+G+ NTG+FNS G NTG FN+G NTGW NSG NT Sbjct 902 NAGRFNVGAGNSGLDNMGFGNSGTRNTGSFNSFAGDGVNTGWFNSGNENTGWFNSGDLNT 961 Query 474 GAFNAGSLNTGFGAVGTGSGPNSGFGNAGTNNSGFFNTGVGSSGFQN--GGSNNSGLQNA 531 G FNAGS+NTGFG+ G SGFGN GTN SGF+N+G +SGFQN GG+ SG+QN Sbjct 962 GLFNAGSVNTGFGSSIDQPGTVSGFGNTGTNMSGFYNSGTDTSGFQNSTGGAYVSGVQN- 1020 Query 532 VGTVIAAGFGNTGAQTVGIANS-----GVLNSGFFNSGVHN-----SGGFNSENQRSGF 580 G AGF NTG GIANS GV NSG NSGV N SGGFN+ + +SGF Sbjct 1021 TGNGALAGFFNTGIANTGIANSGSDNAGVGNSGSDNSGVQNSGTFSSGGFNTGDSQSGF 1079 Score = 120 bits (300), Expect = 9e-25, Method: Compositional matrix adjust. Identities = 136/327 (42%), Positives = 176/327 (54%), Gaps = 56/327 (17%) Query 177 NLGIGNIGNANLGGGNTGDLNTGNGNIGNTNLGSGNRGDANLGSGNIGNSNVGGGNVGNG 236 N+G GN G N+G N G N G GN G++N+GSGN G NLG GN+GN+N G GN GN Sbjct 755 NVGFGNFGAGNVGSANRGSFNFGGGNFGSSNVGSGNHGSHNLGFGNLGNNNFGFGNHGNN 814 Query 237 NFG---SGNGRAGL----PGSGNVGNGNLGNSNLGSGNTGNSNVGFGNTGNNNVGTGNAG 289 N G +G+ G+ G+ N+G GN GN+N+G N+G++NVGF N+GN N G N+G Sbjct 815 NIGFGLTGDNMIGIGGLNAGANNIGFGNSGNNNIGFFNSGDNNVGFFNSGNANYGFANSG 874 Query 290 SGNIGAGNTGSSNWGFGNNGIGNIGFGNTGNGNIGFGLTGNNQVGIGG------------ 337 S + G NTGS N GFGN N GFGN G N+G G +G + +G G Sbjct 875 SVDTGFWNTGSHNTGFGNGSDSNFGFGNAGRFNVGAGNSGLDNMGFGNSGTRNTGSFNSF 934 Query 338 ---------LNSGSGNIGLFNSGTNNVGFFNSGNGNLGIGNSSDAN---VGIGNSG---- 381 NSG+ N G FNSG N G FN+G+ N G G+S D G GN+G Sbjct 935 AGDGVNTGWFNSGNENTGWFNSGDLNTGLFNAGSVNTGFGSSIDQPGTVSGFGNTGTNMS 994 Query 382 --------------ATVGPFVAG-HNTG------FGNSGSLNTGMGNAGGVNTGFGNGGA 420 +T G +V+G NTG F N+G NTG+ N+G N G GN G+ Sbjct 995 GFYNSGTDTSGFQNSTGGAYVSGVQNTGNGALAGFFNTGIANTGIANSGSDNAGVGNSGS 1054 Query 421 INLGFGNSGQLNAGSFNAGSINTGNFN 447 N G NSG ++G FN G +G F+ Sbjct 1055 DNSGVQNSGTFSSGGFNTGDSQSGFFH 1081 Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 114/256 (45%), Positives = 136/256 (54%), Gaps = 31/256 (12%) Query 344 NIGLFNSGTNNVGFFNSGNGNLGIGNSSDANVGIGNSGATVGPFVAGHNTGFGNSGSLNT 403 N G N+G NVG N GN NLG GN D N G GN G N G GN + N Sbjct 216 NTGFGNTGAWNVGIGNIGNYNLGSGNHGDLNFGSGNYGNA--------NLGSGNVANGNL 267 Query 404 GMGNAGGVNTGFGNGGAINLGFGNSGQLNAGSFNAGSINTGNFNSGQGNTGDFNAGV--- 460 G GN G N G GN G++NLG GN G LN GS N G ++ GN N G GN G+ N G Sbjct 268 GSGNRGFFNLGNGNFGSLNLGNGNRGDLNFGSGNTGPVD-GNRNFGFGNWGNANLGSGNH 326 Query 461 --RNTGWSNSGLTNTGAFNAGSLNTGFGAVGTGSGPNSGFGNAGTNNSGF---------- 508 N G+ N G N G+ N GS N GFG G+ N GFGN G NN GF Sbjct 327 SSNNFGFGNWGPMNMGSGNHGSYNIGFGNFGS---KNLGFGNHGNNNIGFGLTGDNQVGI 383 Query 509 --FNTGVGSSGFQNGGSNNSGLQNAVGTVIAAGFGNTGAQTVGIANSGVLNSGFFNSGVH 566 N+G+G+ GF N G+NN GL N+ GF N+G+ G ANSG +N+GF+N+G Sbjct 384 GGLNSGIGNIGFGNSGNNNIGLFNSGDNNF--GFFNSGSGNFGFANSGNINTGFWNAGNW 441 Query 567 NSGGFNSENQRSGFGN 582 N+G N N GFGN Sbjct 442 NTGAGNGGNLDFGFGN 457 >gi|297634116|ref|ZP_06951896.1| PPE family protein [Mycobacterium tuberculosis KZN 4207] Length=687 Score = 441 bits (1134), Expect = 2e-121, Method: Compositional matrix adjust. Identities = 343/678 (51%), Positives = 408/678 (61%), Gaps = 106/678 (15%) Query 1 MNYAVLPPELNSLRMFTGAGSAPMLAAAVAWDGLAAELGSAASSFGSVTSDLASQAWQGP 60 MN++VLPPE+NS MF GAG PMLAAA AW GLA +LGSAA+SF +VTS LA+ +WQGP Sbjct 10 MNFSVLPPEINSALMFAGAGPGPMLAAASAWTGLAGDLGSAAASFSAVTSQLATGSWQGP 69 Query 61 AAAAMAAAAAPYAGWLSAAAARAAGAAAQAKAVASAFEAARAATVHPLLVAANRNAFAQL 120 A+AAM AA YA WL+ AAA+A AA QA+A SAFEAA AATVHP V+ANR L Sbjct 70 ASAAMTGVAASYARWLTTAAAQAEQAAGQAQAAVSAFEAALAATVHPGAVSANRGRLRSL 129 Query 121 VMSNWFGLNAPLIAAVEGAYEQMWAADVAAMVGYHSGASAAAEQLVPFQQA--------- 171 V SN G NAP IAAVE YEQMWAADVAAM+GYH ASA A L PF + Sbjct 130 VASNLLGQNAPAIAAVEAVYEQMWAADVAAMLGYHGEASAVALSLTPFTPSPSAAATPGG 189 Query 172 ---LQQLP-----------------NLGIGNIGNANLGGGNTGDLNTGNGNIGNTNLGSG 211 + P NLG+GN+G+ N G NTG +N GN NIG+ NLGSG Sbjct 190 AVIIAGFPFLDLGNVTIGGFNLASGNLGLGNLGSFNPGSANTGSVNLGNANIGDLNLGSG 249 Query 212 NRGDANL--------------------GSGNIGNSNVGGGNVGNGNFGSGNGRAGLPGSG 251 N G NL GSGNIG+ N+GGGN+G+ N GSGN G Sbjct 250 NIGSYNLGGGNTGDLNPGSGNTGTLNWGSGNIGSYNLGGGNLGSYNLGSGN-----TGDT 304 Query 252 NVGNGNLGNSNLGSGNTGNSNVGFGNTGNNNVGTGNAGSGNIGAGNTGSSNWGFGNNGIG 311 N G GN GN N+G GNTGNSN GFGNTGN N G GN G N G+GN GS N GFGN G Sbjct 305 NFGGGNTGNLNVGGGNTGNSNFGFGNTGNVNFGNGNTGDTNFGSGNLGSGNIGFGNKGSH 364 Query 312 NIGFGNTGNGNIGFGLTGNNQVGIGGLNSGSGNIGLFNSGTNNVGFFNSGNGNLGIGNSS 371 NIGFGN+GN NIGFGLTG+NQ+G G LNSGSGN+G NSG N+GFFNSGN N+G+GNS Sbjct 365 NIGFGNSGNNNIGFGLTGDNQIGFGALNSGSGNLGFGNSGNGNIGFFNSGNNNIGMGNSG 424 Query 372 DANVGIGNSGATVGPFVAGHNTGFGNSGSLNTGMGNAGGVNTGFGNGGAINLGFGNSGQL 431 + G+G G A ++GFGNSG L+TG+GN+G ++TG+ N + G+ NSG Sbjct 425 N---GVGALSVEFGS-SAERSSGFGNSGELSTGIGNSGQLSTGWFNSATTSTGWFNSGTT 480 Query 432 NAGSFNAGSINTGN--------------FNSGQGNTGDFNAGVRNTGWSNSGLTNTGAFN 477 N G FN+G+ NTG FNSG NTG FNAG NTG NSG NTG FN Sbjct 481 NTGWFNSGTTNTGIGNSGGNLVTGSMGLFNSGHTNTGSFNAGSMNTGDFNSGNVNTGYFN 540 Query 478 AGSLNTGF---GAVGTG-------SGPNSGFGNAGTNNSGFFNTGVGSSGFQNGGSN--- 524 +G++NTGF G + TG NSG+ + GTNNSG+ N G +SGF N + Sbjct 541 SGNINTGFFNSGDLNTGLFNSVNQPVQNSGWLHTGTNNSGYANAGTFNSGFDNNARDEHA 600 Query 525 -----NSGLQNA---------VGTVIAAGFGNTGAQTVGIAN-SGVLN-----SGFFNSG 564 NSGL N VG + +GF N+ G AN SG +N SGFFN G Sbjct 601 EFVTGNSGLANVGNYNAGIINVGDHL-SGFRNSVPTITGTANISGFVNAGTSISGFFNFG 659 Query 565 VHNSGGFNSENQRSGFGN 582 SG N +++ SG+ N Sbjct 660 SLMSGFANFDDEVSGYLN 677 >gi|308378968|ref|ZP_07484506.2| PPE family protein [Mycobacterium tuberculosis SUMu010] gi|308358702|gb|EFP47553.1| PPE family protein [Mycobacterium tuberculosis SUMu010] Length=679 Score = 441 bits (1133), Expect = 2e-121, Method: Compositional matrix adjust. Identities = 343/678 (51%), Positives = 408/678 (61%), Gaps = 106/678 (15%) Query 1 MNYAVLPPELNSLRMFTGAGSAPMLAAAVAWDGLAAELGSAASSFGSVTSDLASQAWQGP 60 MN++VLPPE+NS MF GAG PMLAAA AW GLA +LGSAA+SF +VTS LA+ +WQGP Sbjct 2 MNFSVLPPEINSALMFAGAGPGPMLAAASAWTGLAGDLGSAAASFSAVTSQLATGSWQGP 61 Query 61 AAAAMAAAAAPYAGWLSAAAARAAGAAAQAKAVASAFEAARAATVHPLLVAANRNAFAQL 120 A+AAM AA YA WL+ AAA+A AA QA+A SAFEAA AATVHP V+ANR L Sbjct 62 ASAAMTGVAASYARWLTTAAAQAEQAAGQAQAAVSAFEAALAATVHPGAVSANRGRLRSL 121 Query 121 VMSNWFGLNAPLIAAVEGAYEQMWAADVAAMVGYHSGASAAAEQLVPFQQA--------- 171 V SN G NAP IAAVE YEQMWAADVAAM+GYH ASA A L PF + Sbjct 122 VASNLLGQNAPAIAAVEAVYEQMWAADVAAMLGYHGEASAVALSLTPFTPSPSAAATPGG 181 Query 172 ---LQQLP-----------------NLGIGNIGNANLGGGNTGDLNTGNGNIGNTNLGSG 211 + P NLG+GN+G+ N G NTG +N GN NIG+ NLGSG Sbjct 182 AVIIAGFPFLDLGNVTIGGFNLASGNLGLGNLGSFNPGSANTGSVNLGNANIGDLNLGSG 241 Query 212 NRGDANL--------------------GSGNIGNSNVGGGNVGNGNFGSGNGRAGLPGSG 251 N G NL GSGNIG+ N+GGGN+G+ N GSGN G Sbjct 242 NIGSYNLGGGNTGDLNPDSGNTGTLNWGSGNIGSYNLGGGNLGSYNLGSGN-----TGDT 296 Query 252 NVGNGNLGNSNLGSGNTGNSNVGFGNTGNNNVGTGNAGSGNIGAGNTGSSNWGFGNNGIG 311 N G GN GN N+G GNTGNSN GFGNTGN N G GN G N G+GN GS N GFGN G Sbjct 297 NFGGGNTGNLNVGGGNTGNSNFGFGNTGNVNFGNGNTGDTNFGSGNLGSGNIGFGNKGSH 356 Query 312 NIGFGNTGNGNIGFGLTGNNQVGIGGLNSGSGNIGLFNSGTNNVGFFNSGNGNLGIGNSS 371 NIGFGN+GN NIGFGLTG+NQ+G G LNSGSGN+G NSG N+GFFNSGN N+G+GNS Sbjct 357 NIGFGNSGNNNIGFGLTGDNQIGFGALNSGSGNLGFGNSGNGNIGFFNSGNNNIGMGNSG 416 Query 372 DANVGIGNSGATVGPFVAGHNTGFGNSGSLNTGMGNAGGVNTGFGNGGAINLGFGNSGQL 431 + G+G G A ++GFGNSG L+TG+GN+G ++TG+ N + G+ NSG Sbjct 417 N---GVGALSVEFGS-SAERSSGFGNSGELSTGIGNSGQLSTGWFNSATTSTGWFNSGTT 472 Query 432 NAGSFNAGSINTGN--------------FNSGQGNTGDFNAGVRNTGWSNSGLTNTGAFN 477 N G FN+G+ NTG FNSG NTG FNAG NTG NSG NTG FN Sbjct 473 NTGWFNSGTTNTGIGNSGGNLVTGSMGLFNSGHTNTGSFNAGSMNTGDFNSGNVNTGYFN 532 Query 478 AGSLNTGF---GAVGTG-------SGPNSGFGNAGTNNSGFFNTGVGSSGFQNGGSN--- 524 +G++NTGF G + TG NSG+ + GTNNSG+ N G +SGF N + Sbjct 533 SGNINTGFFNSGDLNTGLFNSVNQPVQNSGWLHTGTNNSGYANAGTFNSGFDNNARDEHA 592 Query 525 -----NSGLQNA---------VGTVIAAGFGNTGAQTVGIAN-SGVLN-----SGFFNSG 564 NSGL N VG + +GF N+ G AN SG +N SGFFN G Sbjct 593 EFVTGNSGLANVGNYNAGIINVGDHL-SGFRNSVPTITGTANISGFVNAGTSISGFFNFG 651 Query 565 VHNSGGFNSENQRSGFGN 582 SG N +++ SG+ N Sbjct 652 SLMSGFANFDDEVSGYLN 669 >gi|57116882|ref|YP_177817.1| PPE family protein [Mycobacterium tuberculosis H37Rv] gi|148661344|ref|YP_001282867.1| PPE family protein [Mycobacterium tuberculosis H37Ra] gi|6136475|sp|Q10778.2|PPE21_MYCTU RecName: Full=Uncharacterized PPE family protein PPE21 gi|38684031|emb|CAE55401.1| PPE FAMILY PROTEIN [Mycobacterium tuberculosis H37Rv] gi|148505496|gb|ABQ73305.1| PPE family protein [Mycobacterium tuberculosis H37Ra] Length=678 Score = 441 bits (1133), Expect = 2e-121, Method: Compositional matrix adjust. Identities = 343/678 (51%), Positives = 408/678 (61%), Gaps = 106/678 (15%) Query 1 MNYAVLPPELNSLRMFTGAGSAPMLAAAVAWDGLAAELGSAASSFGSVTSDLASQAWQGP 60 MN++VLPPE+NS MF GAG PMLAAA AW GLA +LGSAA+SF +VTS LA+ +WQGP Sbjct 1 MNFSVLPPEINSALMFAGAGPGPMLAAASAWTGLAGDLGSAAASFSAVTSQLATGSWQGP 60 Query 61 AAAAMAAAAAPYAGWLSAAAARAAGAAAQAKAVASAFEAARAATVHPLLVAANRNAFAQL 120 A+AAM AA YA WL+ AAA+A AA QA+A SAFEAA AATVHP V+ANR L Sbjct 61 ASAAMTGVAASYARWLTTAAAQAEQAAGQAQAAVSAFEAALAATVHPGAVSANRGRLRSL 120 Query 121 VMSNWFGLNAPLIAAVEGAYEQMWAADVAAMVGYHSGASAAAEQLVPFQQA--------- 171 V SN G NAP IAAVE YEQMWAADVAAM+GYH ASA A L PF + Sbjct 121 VASNLLGQNAPAIAAVEAVYEQMWAADVAAMLGYHGEASAVALSLTPFTPSPSAAATPGG 180 Query 172 ---LQQLP-----------------NLGIGNIGNANLGGGNTGDLNTGNGNIGNTNLGSG 211 + P NLG+GN+G+ N G NTG +N GN NIG+ NLGSG Sbjct 181 AVIIAGFPFLDLGNVTIGGFNLASGNLGLGNLGSFNPGSANTGSVNLGNANIGDLNLGSG 240 Query 212 NRGDANL--------------------GSGNIGNSNVGGGNVGNGNFGSGNGRAGLPGSG 251 N G NL GSGNIG+ N+GGGN+G+ N GSGN G Sbjct 241 NIGSYNLGGGNTGDLNPDSGNTGTLNWGSGNIGSYNLGGGNLGSYNLGSGN-----TGDT 295 Query 252 NVGNGNLGNSNLGSGNTGNSNVGFGNTGNNNVGTGNAGSGNIGAGNTGSSNWGFGNNGIG 311 N G GN GN N+G GNTGNSN GFGNTGN N G GN G N G+GN GS N GFGN G Sbjct 296 NFGGGNTGNLNVGGGNTGNSNFGFGNTGNVNFGNGNTGDTNFGSGNLGSGNIGFGNKGSH 355 Query 312 NIGFGNTGNGNIGFGLTGNNQVGIGGLNSGSGNIGLFNSGTNNVGFFNSGNGNLGIGNSS 371 NIGFGN+GN NIGFGLTG+NQ+G G LNSGSGN+G NSG N+GFFNSGN N+G+GNS Sbjct 356 NIGFGNSGNNNIGFGLTGDNQIGFGALNSGSGNLGFGNSGNGNIGFFNSGNNNIGMGNSG 415 Query 372 DANVGIGNSGATVGPFVAGHNTGFGNSGSLNTGMGNAGGVNTGFGNGGAINLGFGNSGQL 431 + G+G G A ++GFGNSG L+TG+GN+G ++TG+ N + G+ NSG Sbjct 416 N---GVGALSVEFGS-SAERSSGFGNSGELSTGIGNSGQLSTGWFNSATTSTGWFNSGTT 471 Query 432 NAGSFNAGSINTGN--------------FNSGQGNTGDFNAGVRNTGWSNSGLTNTGAFN 477 N G FN+G+ NTG FNSG NTG FNAG NTG NSG NTG FN Sbjct 472 NTGWFNSGTTNTGIGNSGGNLVTGSMGLFNSGHTNTGSFNAGSMNTGDFNSGNVNTGYFN 531 Query 478 AGSLNTGF---GAVGTG-------SGPNSGFGNAGTNNSGFFNTGVGSSGFQNGGSN--- 524 +G++NTGF G + TG NSG+ + GTNNSG+ N G +SGF N + Sbjct 532 SGNINTGFFNSGDLNTGLFNSVNQPVQNSGWLHTGTNNSGYANAGTFNSGFDNNARDEHA 591 Query 525 -----NSGLQNA---------VGTVIAAGFGNTGAQTVGIAN-SGVLN-----SGFFNSG 564 NSGL N VG + +GF N+ G AN SG +N SGFFN G Sbjct 592 EFVTGNSGLANVGNYNAGIINVGDHL-SGFRNSVPTITGTANISGFVNAGTSISGFFNFG 650 Query 565 VHNSGGFNSENQRSGFGN 582 SG N +++ SG+ N Sbjct 651 SLMSGFANFDDEVSGYLN 668 >gi|121637470|ref|YP_977693.1| PPE family protein [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224989944|ref|YP_002644631.1| PPE family protein [Mycobacterium bovis BCG str. Tokyo 172] gi|253799397|ref|YP_003032398.1| PPE family protein [Mycobacterium tuberculosis KZN 1435] 23 more sequence titles Length=678 Score = 440 bits (1132), Expect = 3e-121, Method: Compositional matrix adjust. Identities = 343/678 (51%), Positives = 408/678 (61%), Gaps = 106/678 (15%) Query 1 MNYAVLPPELNSLRMFTGAGSAPMLAAAVAWDGLAAELGSAASSFGSVTSDLASQAWQGP 60 MN++VLPPE+NS MF GAG PMLAAA AW GLA +LGSAA+SF +VTS LA+ +WQGP Sbjct 1 MNFSVLPPEINSALMFAGAGPGPMLAAASAWTGLAGDLGSAAASFSAVTSQLATGSWQGP 60 Query 61 AAAAMAAAAAPYAGWLSAAAARAAGAAAQAKAVASAFEAARAATVHPLLVAANRNAFAQL 120 A+AAM AA YA WL+ AAA+A AA QA+A SAFEAA AATVHP V+ANR L Sbjct 61 ASAAMTGVAASYARWLTTAAAQAEQAAGQAQAAVSAFEAALAATVHPGAVSANRGRLRSL 120 Query 121 VMSNWFGLNAPLIAAVEGAYEQMWAADVAAMVGYHSGASAAAEQLVPFQQA--------- 171 V SN G NAP IAAVE YEQMWAADVAAM+GYH ASA A L PF + Sbjct 121 VASNLLGQNAPAIAAVEAVYEQMWAADVAAMLGYHGEASAVALSLTPFTPSPSAAATPGG 180 Query 172 ---LQQLP-----------------NLGIGNIGNANLGGGNTGDLNTGNGNIGNTNLGSG 211 + P NLG+GN+G+ N G NTG +N GN NIG+ NLGSG Sbjct 181 AVIIAGFPFLDLGNVTIGGFNLASGNLGLGNLGSFNPGSANTGSVNLGNANIGDLNLGSG 240 Query 212 NRGDANL--------------------GSGNIGNSNVGGGNVGNGNFGSGNGRAGLPGSG 251 N G NL GSGNIG+ N+GGGN+G+ N GSGN G Sbjct 241 NIGSYNLGGGNTGDLNPGSGNTGTLNWGSGNIGSYNLGGGNLGSYNLGSGN-----TGDT 295 Query 252 NVGNGNLGNSNLGSGNTGNSNVGFGNTGNNNVGTGNAGSGNIGAGNTGSSNWGFGNNGIG 311 N G GN GN N+G GNTGNSN GFGNTGN N G GN G N G+GN GS N GFGN G Sbjct 296 NFGGGNTGNLNVGGGNTGNSNFGFGNTGNVNFGNGNTGDTNFGSGNLGSGNIGFGNKGSH 355 Query 312 NIGFGNTGNGNIGFGLTGNNQVGIGGLNSGSGNIGLFNSGTNNVGFFNSGNGNLGIGNSS 371 NIGFGN+GN NIGFGLTG+NQ+G G LNSGSGN+G NSG N+GFFNSGN N+G+GNS Sbjct 356 NIGFGNSGNNNIGFGLTGDNQIGFGALNSGSGNLGFGNSGNGNIGFFNSGNNNIGMGNSG 415 Query 372 DANVGIGNSGATVGPFVAGHNTGFGNSGSLNTGMGNAGGVNTGFGNGGAINLGFGNSGQL 431 + G+G G A ++GFGNSG L+TG+GN+G ++TG+ N + G+ NSG Sbjct 416 N---GVGALSVEFGS-SAERSSGFGNSGELSTGIGNSGQLSTGWFNSATTSTGWFNSGTT 471 Query 432 NAGSFNAGSINTGN--------------FNSGQGNTGDFNAGVRNTGWSNSGLTNTGAFN 477 N G FN+G+ NTG FNSG NTG FNAG NTG NSG NTG FN Sbjct 472 NTGWFNSGTTNTGIGNSGGNLVTGSMGLFNSGHTNTGSFNAGSMNTGDFNSGNVNTGYFN 531 Query 478 AGSLNTGF---GAVGTG-------SGPNSGFGNAGTNNSGFFNTGVGSSGFQNGGSN--- 524 +G++NTGF G + TG NSG+ + GTNNSG+ N G +SGF N + Sbjct 532 SGNINTGFFNSGDLNTGLFNSVNQPVQNSGWLHTGTNNSGYANAGTFNSGFDNNARDEHA 591 Query 525 -----NSGLQNA---------VGTVIAAGFGNTGAQTVGIAN-SGVLN-----SGFFNSG 564 NSGL N VG + +GF N+ G AN SG +N SGFFN G Sbjct 592 EFVTGNSGLANVGNYNAGIINVGDHL-SGFRNSVPTITGTANISGFVNAGTSISGFFNFG 650 Query 565 VHNSGGFNSENQRSGFGN 582 SG N +++ SG+ N Sbjct 651 SLMSGFANFDDEVSGYLN 668 >gi|323719996|gb|EGB29108.1| PPE family protein [Mycobacterium tuberculosis CDC1551A] gi|339294522|gb|AEJ46633.1| PPE family protein [Mycobacterium tuberculosis CCDC5079] Length=679 Score = 440 bits (1132), Expect = 3e-121, Method: Compositional matrix adjust. Identities = 343/678 (51%), Positives = 408/678 (61%), Gaps = 106/678 (15%) Query 1 MNYAVLPPELNSLRMFTGAGSAPMLAAAVAWDGLAAELGSAASSFGSVTSDLASQAWQGP 60 MN++VLPPE+NS MF GAG PMLAAA AW GLA +LGSAA+SF +VTS LA+ +WQGP Sbjct 2 MNFSVLPPEINSALMFAGAGPGPMLAAASAWTGLAGDLGSAAASFSAVTSQLATGSWQGP 61 Query 61 AAAAMAAAAAPYAGWLSAAAARAAGAAAQAKAVASAFEAARAATVHPLLVAANRNAFAQL 120 A+AAM AA YA WL+ AAA+A AA QA+A SAFEAA AATVHP V+ANR L Sbjct 62 ASAAMTGVAASYARWLTTAAAQAEQAAGQAQAAVSAFEAALAATVHPGAVSANRGRLRSL 121 Query 121 VMSNWFGLNAPLIAAVEGAYEQMWAADVAAMVGYHSGASAAAEQLVPFQQA--------- 171 V SN G NAP IAAVE YEQMWAADVAAM+GYH ASA A L PF + Sbjct 122 VASNLLGQNAPAIAAVEAVYEQMWAADVAAMLGYHGEASAVALSLTPFTPSPSAAATPGG 181 Query 172 ---LQQLP-----------------NLGIGNIGNANLGGGNTGDLNTGNGNIGNTNLGSG 211 + P NLG+GN+G+ N G NTG +N GN NIG+ NLGSG Sbjct 182 AVIIAGFPFLDLGNVTIGGFNLASGNLGLGNLGSFNPGSANTGSVNLGNANIGDLNLGSG 241 Query 212 NRGDANL--------------------GSGNIGNSNVGGGNVGNGNFGSGNGRAGLPGSG 251 N G NL GSGNIG+ N+GGGN+G+ N GSGN G Sbjct 242 NIGSYNLGGGNTGDLNPGSGNTGTLNWGSGNIGSYNLGGGNLGSYNLGSGN-----TGDT 296 Query 252 NVGNGNLGNSNLGSGNTGNSNVGFGNTGNNNVGTGNAGSGNIGAGNTGSSNWGFGNNGIG 311 N G GN GN N+G GNTGNSN GFGNTGN N G GN G N G+GN GS N GFGN G Sbjct 297 NFGGGNTGNLNVGGGNTGNSNFGFGNTGNVNFGNGNTGDTNFGSGNLGSGNIGFGNKGSH 356 Query 312 NIGFGNTGNGNIGFGLTGNNQVGIGGLNSGSGNIGLFNSGTNNVGFFNSGNGNLGIGNSS 371 NIGFGN+GN NIGFGLTG+NQ+G G LNSGSGN+G NSG N+GFFNSGN N+G+GNS Sbjct 357 NIGFGNSGNNNIGFGLTGDNQIGFGALNSGSGNLGFGNSGNGNIGFFNSGNNNIGMGNSG 416 Query 372 DANVGIGNSGATVGPFVAGHNTGFGNSGSLNTGMGNAGGVNTGFGNGGAINLGFGNSGQL 431 + G+G G A ++GFGNSG L+TG+GN+G ++TG+ N + G+ NSG Sbjct 417 N---GVGALSVEFGS-SAERSSGFGNSGELSTGIGNSGQLSTGWFNSATTSTGWFNSGTT 472 Query 432 NAGSFNAGSINTGN--------------FNSGQGNTGDFNAGVRNTGWSNSGLTNTGAFN 477 N G FN+G+ NTG FNSG NTG FNAG NTG NSG NTG FN Sbjct 473 NTGWFNSGTTNTGIGNSGGNLVTGSMGLFNSGHTNTGSFNAGSMNTGDFNSGNVNTGYFN 532 Query 478 AGSLNTGF---GAVGTG-------SGPNSGFGNAGTNNSGFFNTGVGSSGFQNGGSN--- 524 +G++NTGF G + TG NSG+ + GTNNSG+ N G +SGF N + Sbjct 533 SGNINTGFFNSGDLNTGLFNSVNQPVQNSGWLHTGTNNSGYANAGTFNSGFDNNARDEHA 592 Query 525 -----NSGLQNA---------VGTVIAAGFGNTGAQTVGIAN-SGVLN-----SGFFNSG 564 NSGL N VG + +GF N+ G AN SG +N SGFFN G Sbjct 593 EFVTGNSGLANVGNYNAGIINVGDHL-SGFRNSVPTITGTANISGFVNAGTSISGFFNFG 651 Query 565 VHNSGGFNSENQRSGFGN 582 SG N +++ SG+ N Sbjct 652 SLMSGFANFDDEVSGYLN 669 >gi|15841015|ref|NP_336052.1| PPE family protein [Mycobacterium tuberculosis CDC1551] gi|148822772|ref|YP_001287526.1| PPE family protein [Mycobacterium tuberculosis F11] gi|254231776|ref|ZP_04925103.1| PPE family protein [Mycobacterium tuberculosis C] 9 more sequence titles Length=760 Score = 440 bits (1132), Expect = 3e-121, Method: Compositional matrix adjust. Identities = 343/678 (51%), Positives = 408/678 (61%), Gaps = 106/678 (15%) Query 1 MNYAVLPPELNSLRMFTGAGSAPMLAAAVAWDGLAAELGSAASSFGSVTSDLASQAWQGP 60 MN++VLPPE+NS MF GAG PMLAAA AW GLA +LGSAA+SF +VTS LA+ +WQGP Sbjct 83 MNFSVLPPEINSALMFAGAGPGPMLAAASAWTGLAGDLGSAAASFSAVTSQLATGSWQGP 142 Query 61 AAAAMAAAAAPYAGWLSAAAARAAGAAAQAKAVASAFEAARAATVHPLLVAANRNAFAQL 120 A+AAM AA YA WL+ AAA+A AA QA+A SAFEAA AATVHP V+ANR L Sbjct 143 ASAAMTGVAASYARWLTTAAAQAEQAAGQAQAAVSAFEAALAATVHPGAVSANRGRLRSL 202 Query 121 VMSNWFGLNAPLIAAVEGAYEQMWAADVAAMVGYHSGASAAAEQLVPFQQA--------- 171 V SN G NAP IAAVE YEQMWAADVAAM+GYH ASA A L PF + Sbjct 203 VASNLLGQNAPAIAAVEAVYEQMWAADVAAMLGYHGEASAVALSLTPFTPSPSAAATPGG 262 Query 172 ---LQQLP-----------------NLGIGNIGNANLGGGNTGDLNTGNGNIGNTNLGSG 211 + P NLG+GN+G+ N G NTG +N GN NIG+ NLGSG Sbjct 263 AVIIAGFPFLDLGNVTIGGFNLASGNLGLGNLGSFNPGSANTGSVNLGNANIGDLNLGSG 322 Query 212 NRGDANL--------------------GSGNIGNSNVGGGNVGNGNFGSGNGRAGLPGSG 251 N G NL GSGNIG+ N+GGGN+G+ N GSGN G Sbjct 323 NIGSYNLGGGNTGDLNPGSGNTGTLNWGSGNIGSYNLGGGNLGSYNLGSGN-----TGDT 377 Query 252 NVGNGNLGNSNLGSGNTGNSNVGFGNTGNNNVGTGNAGSGNIGAGNTGSSNWGFGNNGIG 311 N G GN GN N+G GNTGNSN GFGNTGN N G GN G N G+GN GS N GFGN G Sbjct 378 NFGGGNTGNLNVGGGNTGNSNFGFGNTGNVNFGNGNTGDTNFGSGNLGSGNIGFGNKGSH 437 Query 312 NIGFGNTGNGNIGFGLTGNNQVGIGGLNSGSGNIGLFNSGTNNVGFFNSGNGNLGIGNSS 371 NIGFGN+GN NIGFGLTG+NQ+G G LNSGSGN+G NSG N+GFFNSGN N+G+GNS Sbjct 438 NIGFGNSGNNNIGFGLTGDNQIGFGALNSGSGNLGFGNSGNGNIGFFNSGNNNIGMGNSG 497 Query 372 DANVGIGNSGATVGPFVAGHNTGFGNSGSLNTGMGNAGGVNTGFGNGGAINLGFGNSGQL 431 + G+G G A ++GFGNSG L+TG+GN+G ++TG+ N + G+ NSG Sbjct 498 N---GVGALSVEFGS-SAERSSGFGNSGELSTGIGNSGQLSTGWFNSATTSTGWFNSGTT 553 Query 432 NAGSFNAGSINTGN--------------FNSGQGNTGDFNAGVRNTGWSNSGLTNTGAFN 477 N G FN+G+ NTG FNSG NTG FNAG NTG NSG NTG FN Sbjct 554 NTGWFNSGTTNTGIGNSGGNLVTGSMGLFNSGHTNTGSFNAGSMNTGDFNSGNVNTGYFN 613 Query 478 AGSLNTGF---GAVGTG-------SGPNSGFGNAGTNNSGFFNTGVGSSGFQNGGSN--- 524 +G++NTGF G + TG NSG+ + GTNNSG+ N G +SGF N + Sbjct 614 SGNINTGFFNSGDLNTGLFNSVNQPVQNSGWLHTGTNNSGYANAGTFNSGFDNNARDEHA 673 Query 525 -----NSGLQNA---------VGTVIAAGFGNTGAQTVGIAN-SGVLN-----SGFFNSG 564 NSGL N VG + +GF N+ G AN SG +N SGFFN G Sbjct 674 EFVTGNSGLANVGNYNAGIINVGDHL-SGFRNSVPTITGTANISGFVNAGTSISGFFNFG 732 Query 565 VHNSGGFNSENQRSGFGN 582 SG N +++ SG+ N Sbjct 733 SLMSGFANFDDEVSGYLN 750 >gi|254550567|ref|ZP_05141014.1| PPE family protein [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|297731103|ref|ZP_06960221.1| PPE family protein [Mycobacterium tuberculosis KZN R506] gi|298525060|ref|ZP_07012469.1| predicted protein [Mycobacterium tuberculosis 94_M4241A] gi|298494854|gb|EFI30148.1| predicted protein [Mycobacterium tuberculosis 94_M4241A] gi|339298158|gb|AEJ50268.1| PPE family protein [Mycobacterium tuberculosis CCDC5180] Length=681 Score = 440 bits (1132), Expect = 3e-121, Method: Compositional matrix adjust. Identities = 343/678 (51%), Positives = 408/678 (61%), Gaps = 106/678 (15%) Query 1 MNYAVLPPELNSLRMFTGAGSAPMLAAAVAWDGLAAELGSAASSFGSVTSDLASQAWQGP 60 MN++VLPPE+NS MF GAG PMLAAA AW GLA +LGSAA+SF +VTS LA+ +WQGP Sbjct 4 MNFSVLPPEINSALMFAGAGPGPMLAAASAWTGLAGDLGSAAASFSAVTSQLATGSWQGP 63 Query 61 AAAAMAAAAAPYAGWLSAAAARAAGAAAQAKAVASAFEAARAATVHPLLVAANRNAFAQL 120 A+AAM AA YA WL+ AAA+A AA QA+A SAFEAA AATVHP V+ANR L Sbjct 64 ASAAMTGVAASYARWLTTAAAQAEQAAGQAQAAVSAFEAALAATVHPGAVSANRGRLRSL 123 Query 121 VMSNWFGLNAPLIAAVEGAYEQMWAADVAAMVGYHSGASAAAEQLVPFQQA--------- 171 V SN G NAP IAAVE YEQMWAADVAAM+GYH ASA A L PF + Sbjct 124 VASNLLGQNAPAIAAVEAVYEQMWAADVAAMLGYHGEASAVALSLTPFTPSPSAAATPGG 183 Query 172 ---LQQLP-----------------NLGIGNIGNANLGGGNTGDLNTGNGNIGNTNLGSG 211 + P NLG+GN+G+ N G NTG +N GN NIG+ NLGSG Sbjct 184 AVIIAGFPFLDLGNVTIGGFNLASGNLGLGNLGSFNPGSANTGSVNLGNANIGDLNLGSG 243 Query 212 NRGDANL--------------------GSGNIGNSNVGGGNVGNGNFGSGNGRAGLPGSG 251 N G NL GSGNIG+ N+GGGN+G+ N GSGN G Sbjct 244 NIGSYNLGGGNTGDLNPGSGNTGTLNWGSGNIGSYNLGGGNLGSYNLGSGN-----TGDT 298 Query 252 NVGNGNLGNSNLGSGNTGNSNVGFGNTGNNNVGTGNAGSGNIGAGNTGSSNWGFGNNGIG 311 N G GN GN N+G GNTGNSN GFGNTGN N G GN G N G+GN GS N GFGN G Sbjct 299 NFGGGNTGNLNVGGGNTGNSNFGFGNTGNVNFGNGNTGDTNFGSGNLGSGNIGFGNKGSH 358 Query 312 NIGFGNTGNGNIGFGLTGNNQVGIGGLNSGSGNIGLFNSGTNNVGFFNSGNGNLGIGNSS 371 NIGFGN+GN NIGFGLTG+NQ+G G LNSGSGN+G NSG N+GFFNSGN N+G+GNS Sbjct 359 NIGFGNSGNNNIGFGLTGDNQIGFGALNSGSGNLGFGNSGNGNIGFFNSGNNNIGMGNSG 418 Query 372 DANVGIGNSGATVGPFVAGHNTGFGNSGSLNTGMGNAGGVNTGFGNGGAINLGFGNSGQL 431 + G+G G A ++GFGNSG L+TG+GN+G ++TG+ N + G+ NSG Sbjct 419 N---GVGALSVEFGS-SAERSSGFGNSGELSTGIGNSGQLSTGWFNSATTSTGWFNSGTT 474 Query 432 NAGSFNAGSINTGN--------------FNSGQGNTGDFNAGVRNTGWSNSGLTNTGAFN 477 N G FN+G+ NTG FNSG NTG FNAG NTG NSG NTG FN Sbjct 475 NTGWFNSGTTNTGIGNSGGNLVTGSMGLFNSGHTNTGSFNAGSMNTGDFNSGNVNTGYFN 534 Query 478 AGSLNTGF---GAVGTG-------SGPNSGFGNAGTNNSGFFNTGVGSSGFQNGGSN--- 524 +G++NTGF G + TG NSG+ + GTNNSG+ N G +SGF N + Sbjct 535 SGNINTGFFNSGDLNTGLFNSVNQPVQNSGWLHTGTNNSGYANAGTFNSGFDNNARDEHA 594 Query 525 -----NSGLQNA---------VGTVIAAGFGNTGAQTVGIAN-SGVLN-----SGFFNSG 564 NSGL N VG + +GF N+ G AN SG +N SGFFN G Sbjct 595 EFVTGNSGLANVGNYNAGIINVGDHL-SGFRNSVPTITGTANISGFVNAGTSISGFFNFG 653 Query 565 VHNSGGFNSENQRSGFGN 582 SG N +++ SG+ N Sbjct 654 SLMSGFANFDDEVSGYLN 671 >gi|306775737|ref|ZP_07414074.1| PPE family protein [Mycobacterium tuberculosis SUMu001] gi|307084126|ref|ZP_07493239.1| PPE family protein [Mycobacterium tuberculosis SUMu012] gi|308380110|ref|ZP_07488731.2| PPE family protein [Mycobacterium tuberculosis SUMu011] gi|308215829|gb|EFO75228.1| PPE family protein [Mycobacterium tuberculosis SUMu001] gi|308362583|gb|EFP51434.1| PPE family protein [Mycobacterium tuberculosis SUMu011] gi|308366248|gb|EFP55099.1| PPE family protein [Mycobacterium tuberculosis SUMu012] Length=681 Score = 440 bits (1131), Expect = 3e-121, Method: Compositional matrix adjust. Identities = 343/678 (51%), Positives = 408/678 (61%), Gaps = 106/678 (15%) Query 1 MNYAVLPPELNSLRMFTGAGSAPMLAAAVAWDGLAAELGSAASSFGSVTSDLASQAWQGP 60 MN++VLPPE+NS MF GAG PMLAAA AW GLA +LGSAA+SF +VTS LA+ +WQGP Sbjct 4 MNFSVLPPEINSALMFAGAGPGPMLAAASAWTGLAGDLGSAAASFSAVTSQLATGSWQGP 63 Query 61 AAAAMAAAAAPYAGWLSAAAARAAGAAAQAKAVASAFEAARAATVHPLLVAANRNAFAQL 120 A+AAM AA YA WL+ AAA+A AA QA+A SAFEAA AATVHP V+ANR L Sbjct 64 ASAAMTGVAASYARWLTTAAAQAEQAAGQAQAAVSAFEAALAATVHPGAVSANRGRLRSL 123 Query 121 VMSNWFGLNAPLIAAVEGAYEQMWAADVAAMVGYHSGASAAAEQLVPFQQA--------- 171 V SN G NAP IAAVE YEQMWAADVAAM+GYH ASA A L PF + Sbjct 124 VASNLLGQNAPAIAAVEAVYEQMWAADVAAMLGYHGEASAVALSLTPFTPSPSAAATPGG 183 Query 172 ---LQQLP-----------------NLGIGNIGNANLGGGNTGDLNTGNGNIGNTNLGSG 211 + P NLG+GN+G+ N G NTG +N GN NIG+ NLGSG Sbjct 184 AVIIAGFPFLDLGNVTIGGFNLASGNLGLGNLGSFNPGSANTGSVNLGNANIGDLNLGSG 243 Query 212 NRGDANL--------------------GSGNIGNSNVGGGNVGNGNFGSGNGRAGLPGSG 251 N G NL GSGNIG+ N+GGGN+G+ N GSGN G Sbjct 244 NIGSYNLGGGNTGDLNPDSGNTGTLNWGSGNIGSYNLGGGNLGSYNLGSGN-----TGDT 298 Query 252 NVGNGNLGNSNLGSGNTGNSNVGFGNTGNNNVGTGNAGSGNIGAGNTGSSNWGFGNNGIG 311 N G GN GN N+G GNTGNSN GFGNTGN N G GN G N G+GN GS N GFGN G Sbjct 299 NFGGGNTGNLNVGGGNTGNSNFGFGNTGNVNFGNGNTGDTNFGSGNLGSGNIGFGNKGSH 358 Query 312 NIGFGNTGNGNIGFGLTGNNQVGIGGLNSGSGNIGLFNSGTNNVGFFNSGNGNLGIGNSS 371 NIGFGN+GN NIGFGLTG+NQ+G G LNSGSGN+G NSG N+GFFNSGN N+G+GNS Sbjct 359 NIGFGNSGNNNIGFGLTGDNQIGFGALNSGSGNLGFGNSGNGNIGFFNSGNNNIGMGNSG 418 Query 372 DANVGIGNSGATVGPFVAGHNTGFGNSGSLNTGMGNAGGVNTGFGNGGAINLGFGNSGQL 431 + G+G G A ++GFGNSG L+TG+GN+G ++TG+ N + G+ NSG Sbjct 419 N---GVGALSVEFGS-SAERSSGFGNSGELSTGIGNSGQLSTGWFNSATTSTGWFNSGTT 474 Query 432 NAGSFNAGSINTGN--------------FNSGQGNTGDFNAGVRNTGWSNSGLTNTGAFN 477 N G FN+G+ NTG FNSG NTG FNAG NTG NSG NTG FN Sbjct 475 NTGWFNSGTTNTGIGNSGGNLVTGSMGLFNSGHTNTGSFNAGSMNTGDFNSGNVNTGYFN 534 Query 478 AGSLNTGF---GAVGTG-------SGPNSGFGNAGTNNSGFFNTGVGSSGFQNGGSN--- 524 +G++NTGF G + TG NSG+ + GTNNSG+ N G +SGF N + Sbjct 535 SGNINTGFFNSGDLNTGLFNSVNQPVQNSGWLHTGTNNSGYANAGTFNSGFDNNARDEHA 594 Query 525 -----NSGLQNA---------VGTVIAAGFGNTGAQTVGIAN-SGVLN-----SGFFNSG 564 NSGL N VG + +GF N+ G AN SG +N SGFFN G Sbjct 595 EFVTGNSGLANVGNYNAGIINVGDHL-SGFRNSVPTITGTANISGFVNAGTSISGFFNFG 653 Query 565 VHNSGGFNSENQRSGFGN 582 SG N +++ SG+ N Sbjct 654 SLMSGFANFDDEVSGYLN 671 >gi|183981160|ref|YP_001849451.1| PPE family protein [Mycobacterium marinum M] gi|183174486|gb|ACC39596.1| PPE family protein [Mycobacterium marinum M] Length=608 Score = 440 bits (1131), Expect = 4e-121, Method: Compositional matrix adjust. Identities = 358/641 (56%), Positives = 407/641 (64%), Gaps = 92/641 (14%) Query 1 MNYAVLPPELNSLRMFTGAGSAPMLAAAVAWDGLAAELGSAASSFGSVTSDLASQAWQGP 60 MN+ +LPPE+NS RMF GAGS PML+AA+AWDGLA ELGSAA SFGSVTS L +WQG Sbjct 1 MNFPMLPPEINSARMFAGAGSGPMLSAAMAWDGLAVELGSAAESFGSVTSGLVGSSWQGA 60 Query 61 AAAAMAAAAAPYAGWLSAAAARAAGAAAQAKAVASAFEAARAATVHPLLVAANRNAFAQL 120 AAAAM+AAAAPY WL+AAA RA AA QAK V SAFEAARAA +HPL VAANRNA QL Sbjct 61 AAAAMSAAAAPYVSWLNAAAVRAGEAALQAKEVVSAFEAARAAMIHPLAVAANRNALVQL 120 Query 121 VMSNWFGLNAPLIAAVEGAYEQMWAADVAAMVGYHSGASAAAEQLVPFQQALQQLP---- 176 V++N FG NAP IAA EG+YEQMWAADVAAM+GYH GASAAA L +QQALQ L Sbjct 121 VLTNLFGQNAPAIAAAEGSYEQMWAADVAAMLGYHGGASAAASGLASWQQALQGLAGPAA 180 Query 177 --------------NLGIGNIGNANLGGGNTGDLNTGNGNIGNTNLGSGNRGDANLGSGN 222 NL IGNIG+ NLGGGN G+LN G GN GN NLGSGN G NLGSGN Sbjct 181 SVIPGLSIGNIGVGNLSIGNIGDFNLGGGNAGNLNLGGGNTGNANLGSGNNGFFNLGSGN 240 Query 223 IGNSNVGGGNVGNGNFGSGNGRAGLPGSGNVGNGN-LGNSNLGSGN-TGNSNVGFGNTGN 280 GN+N G GN GN N+GSGN G+ NVG GN LG N G GN G++N+G GN GN Sbjct 241 TGNTNFGNGNRGNLNWGSGN-----LGNANVGFGNFLGQGNFGFGNRVGDANLGSGNLGN 295 Query 281 NNVGTGNAGSGNIGAGNTGSSNWGFGNNGIGNIGFGNTGNGNIGFGLTGNNQVGI----- 335 N G GN G N+G+GN G SN GFGN G N+GFGN G+ NIGFGLTGNNQVGI Sbjct 296 ANFGNGNLGDTNLGSGNNGFSNVGFGNLGSNNLGFGNNGDNNIGFGLTGNNQVGINFAGL 355 Query 336 -------GGLNSGSGNIGLFNSGTNNVGFFNSGNGNLGIGNSSDANVGIGNSGATVGPFV 388 G NSG N+G FNSG+NNVGFFNSG+GN G Sbjct 356 NGGIGNIGLGNSGDNNVGFFNSGSNNVGFFNSGDGNFG---------------------- 393 Query 389 AGHNTGFGNSGSLNTGMGNAGGVNTGFGNGGAINLGF----------GNSGQLNAGSFNA 438 F N+G NTG NAG VNTGFGNGG NLGF GN G N G N+ Sbjct 394 ------FANAGDTNTGFWNAGRVNTGFGNGGNFNLGFGNGGAANVGVGNGGGGNMGFGNS 447 Query 439 GSINTGNF------NSGQGNTGDFNAGVRNTGWSNSGLTNTGAFNAGSLNTGFGAVGTGS 492 G+ NTG+F GNTG FN+G NTG+ NSG TNTG FNAGS+NTG G+ T Sbjct 448 GTENTGSFNSGGDNGPNGGNTGSFNSGYVNTGFFNSGSTNTGLFNAGSVNTGIGSPDTQP 507 Query 493 GPNSGFGNAGTNNSGFFNTGVGSSGFQNGGSN---NSGLQNAVGTVIA--------AGFG 541 G SGFGN G SGF N+G +SGF N + SG+ N + AG Sbjct 508 GSISGFGNTGAGVSGFNNSGDATSGFMNVATTFGFTSGINNVGDYQVGLFNTGFGNAGIA 567 Query 542 NTGAQTVGIANSGVLNSGFFNSGVHNSGGFNSENQRSGFGN 582 N+G T GIANSG L+SG NSG ++SGGFN+ + +SGF N Sbjct 568 NSGNATFGIANSGALSSGISNSGTNSSGGFNTGDDQSGFFN 608 >gi|308373181|ref|ZP_07431301.2| PPE family protein [Mycobacterium tuberculosis SUMu005] gi|308374342|ref|ZP_07435680.2| PPE family protein [Mycobacterium tuberculosis SUMu006] gi|308375613|ref|ZP_07444506.2| PPE family protein [Mycobacterium tuberculosis SUMu007] gi|308376758|ref|ZP_07439927.2| PPE family protein [Mycobacterium tuberculosis SUMu008] gi|308338567|gb|EFP27418.1| PPE family protein [Mycobacterium tuberculosis SUMu005] gi|308342268|gb|EFP31119.1| PPE family protein [Mycobacterium tuberculosis SUMu006] gi|308345763|gb|EFP34614.1| PPE family protein [Mycobacterium tuberculosis SUMu007] gi|308350063|gb|EFP38914.1| PPE family protein [Mycobacterium tuberculosis SUMu008] Length=679 Score = 439 bits (1130), Expect = 5e-121, Method: Compositional matrix adjust. Identities = 344/678 (51%), Positives = 408/678 (61%), Gaps = 106/678 (15%) Query 1 MNYAVLPPELNSLRMFTGAGSAPMLAAAVAWDGLAAELGSAASSFGSVTSDLASQAWQGP 60 MN++VLPPE+NS MF GAG PMLAAA AW GLA +LGSAA+SF +VTS LA+ +WQGP Sbjct 2 MNFSVLPPEINSALMFAGAGPGPMLAAASAWTGLAGDLGSAAASFSAVTSQLATGSWQGP 61 Query 61 AAAAMAAAAAPYAGWLSAAAARAAGAAAQAKAVASAFEAARAATVHPLLVAANRNAFAQL 120 A+AAM AA YA WL+ AAA+A AA QA+A SAFEAA AATVHP V+ANR L Sbjct 62 ASAAMTGVAASYARWLTTAAAQAEQAAGQAQAAVSAFEAALAATVHPGAVSANRGRLRSL 121 Query 121 VMSNWFGLNAPLIAAVEGAYEQMWAADVAAMVGYHSGASAAAEQLVPFQQA--------- 171 V SN G NAP IAAVE YEQMWAADVAAM+GYH ASA A L PF + Sbjct 122 VASNLLGQNAPAIAAVEAVYEQMWAADVAAMLGYHGEASAVALSLTPFTPSPSAAATPGG 181 Query 172 ---LQQLP-----------------NLGIGNIGNANLGGGNTGDLNTGNGNIGNTNLGSG 211 + P NLG+GN+G+ N G NTG +N GN NIG+ NLGSG Sbjct 182 AVIIAGFPFLDLGNVTIGGFNLASGNLGLGNLGSFNPGSANTGSVNLGNANIGDLNLGSG 241 Query 212 NRGDANL--------------------GSGNIGNSNVGGGNVGNGNFGSGNGRAGLPGSG 251 N G NL GSGNIG+ N+GGGN+G+ N GSGN G Sbjct 242 NIGSYNLGGGNTGDLNPGSGNTGTLNWGSGNIGSYNLGGGNLGSYNLGSGN-----TGDT 296 Query 252 NVGNGNLGNSNLGSGNTGNSNVGFGNTGNNNVGTGNAGSGNIGAGNTGSSNWGFGNNGIG 311 N G GN GN N+G GNTGNSN GFGNTGN N G GN G N G+GN GS N GFGN G Sbjct 297 NFGGGNTGNLNVGGGNTGNSNFGFGNTGNVNFGNGNTGDTNFGSGNLGSGNIGFGNKGSH 356 Query 312 NIGFGNTGNGNIGFGLTGNNQVGIGGLNSGSGNIGLFNSGTNNVGFFNSGNGNLGIGNSS 371 NIGFGN+GN NIGFGLTG+NQ+G G LNSGSGN+G NSG N+GFFNSGN N+G+GNS Sbjct 357 NIGFGNSGNNNIGFGLTGDNQIGFGALNSGSGNLGFGNSGNGNIGFFNSGNNNIGMGNSG 416 Query 372 DANVGIGNSGATVGPFVAGHNTGFGNSGSLNTGMGNAGGVNTGFGNGGAINLGFGNSGQL 431 + G+G G A ++GFGNSG L+TG+GN+G ++TG+ N + G+ NSG Sbjct 417 N---GVGALSVEFGS-SAERSSGFGNSGELSTGIGNSGQLSTGWFNSATTSTGWFNSGTT 472 Query 432 NAGSFNAGSINTGN--------------FNSGQGNTGDFNAGVRNTGWSNSGLTNTGAFN 477 N G FN+G+ NTG FNSG NTG FNAG NTG NSG NTG FN Sbjct 473 NTGWFNSGTTNTGIGNSGGNLVTGSMGLFNSGHTNTGSFNAGSMNTGDFNSGNVNTGYFN 532 Query 478 AGSLNTGF---GAVGTG-------SGPNSGFGNAGTNNSGFFNTGVGSSGFQNGGSN--- 524 +G++NTGF G + TG NSG+ + GTNNSG+ N G +SGF N + Sbjct 533 SGNINTGFFNSGDLNTGLFNSVNQPVQNSGWLHTGTNNSGYANAGTFNSGFDNNARDEHA 592 Query 525 -----NSGLQNAVGTVIA---------AGFGNTGAQTVGIAN-SGVLN-----SGFFNSG 564 NSGL N VG A +GF N+ G AN SG +N SGFFN G Sbjct 593 EFVTGNSGLAN-VGNYNAGIINVDDHLSGFRNSVPTITGTANISGFVNAGTSISGFFNFG 651 Query 565 VHNSGGFNSENQRSGFGN 582 SG N +++ SG+ N Sbjct 652 SLMSGFANFDDEVSGYLN 669 >gi|306779561|ref|ZP_07417898.1| PPE family protein [Mycobacterium tuberculosis SUMu002] gi|306784292|ref|ZP_07422614.1| PPE family protein [Mycobacterium tuberculosis SUMu003] gi|306967658|ref|ZP_07480319.1| PPE family protein [Mycobacterium tuberculosis SUMu009] gi|308371996|ref|ZP_07426982.2| PPE family protein [Mycobacterium tuberculosis SUMu004] gi|308327495|gb|EFP16346.1| PPE family protein [Mycobacterium tuberculosis SUMu002] gi|308330957|gb|EFP19808.1| PPE family protein [Mycobacterium tuberculosis SUMu003] gi|308334778|gb|EFP23629.1| PPE family protein [Mycobacterium tuberculosis SUMu004] gi|308354717|gb|EFP43568.1| PPE family protein [Mycobacterium tuberculosis SUMu009] Length=681 Score = 439 bits (1129), Expect = 6e-121, Method: Compositional matrix adjust. Identities = 344/678 (51%), Positives = 408/678 (61%), Gaps = 106/678 (15%) Query 1 MNYAVLPPELNSLRMFTGAGSAPMLAAAVAWDGLAAELGSAASSFGSVTSDLASQAWQGP 60 MN++VLPPE+NS MF GAG PMLAAA AW GLA +LGSAA+SF +VTS LA+ +WQGP Sbjct 4 MNFSVLPPEINSALMFAGAGPGPMLAAASAWTGLAGDLGSAAASFSAVTSQLATGSWQGP 63 Query 61 AAAAMAAAAAPYAGWLSAAAARAAGAAAQAKAVASAFEAARAATVHPLLVAANRNAFAQL 120 A+AAM AA YA WL+ AAA+A AA QA+A SAFEAA AATVHP V+ANR L Sbjct 64 ASAAMTGVAASYARWLTTAAAQAEQAAGQAQAAVSAFEAALAATVHPGAVSANRGRLRSL 123 Query 121 VMSNWFGLNAPLIAAVEGAYEQMWAADVAAMVGYHSGASAAAEQLVPFQQA--------- 171 V SN G NAP IAAVE YEQMWAADVAAM+GYH ASA A L PF + Sbjct 124 VASNLLGQNAPAIAAVEAVYEQMWAADVAAMLGYHGEASAVALSLTPFTPSPSAAATPGG 183 Query 172 ---LQQLP-----------------NLGIGNIGNANLGGGNTGDLNTGNGNIGNTNLGSG 211 + P NLG+GN+G+ N G NTG +N GN NIG+ NLGSG Sbjct 184 AVIIAGFPFLDLGNVTIGGFNLASGNLGLGNLGSFNPGSANTGSVNLGNANIGDLNLGSG 243 Query 212 NRGDANL--------------------GSGNIGNSNVGGGNVGNGNFGSGNGRAGLPGSG 251 N G NL GSGNIG+ N+GGGN+G+ N GSGN G Sbjct 244 NIGSYNLGGGNTGDLNPGSGNTGTLNWGSGNIGSYNLGGGNLGSYNLGSGN-----TGDT 298 Query 252 NVGNGNLGNSNLGSGNTGNSNVGFGNTGNNNVGTGNAGSGNIGAGNTGSSNWGFGNNGIG 311 N G GN GN N+G GNTGNSN GFGNTGN N G GN G N G+GN GS N GFGN G Sbjct 299 NFGGGNTGNLNVGGGNTGNSNFGFGNTGNVNFGNGNTGDTNFGSGNLGSGNIGFGNKGSH 358 Query 312 NIGFGNTGNGNIGFGLTGNNQVGIGGLNSGSGNIGLFNSGTNNVGFFNSGNGNLGIGNSS 371 NIGFGN+GN NIGFGLTG+NQ+G G LNSGSGN+G NSG N+GFFNSGN N+G+GNS Sbjct 359 NIGFGNSGNNNIGFGLTGDNQIGFGALNSGSGNLGFGNSGNGNIGFFNSGNNNIGMGNSG 418 Query 372 DANVGIGNSGATVGPFVAGHNTGFGNSGSLNTGMGNAGGVNTGFGNGGAINLGFGNSGQL 431 + G+G G A ++GFGNSG L+TG+GN+G ++TG+ N + G+ NSG Sbjct 419 N---GVGALSVEFGS-SAERSSGFGNSGELSTGIGNSGQLSTGWFNSATTSTGWFNSGTT 474 Query 432 NAGSFNAGSINTGN--------------FNSGQGNTGDFNAGVRNTGWSNSGLTNTGAFN 477 N G FN+G+ NTG FNSG NTG FNAG NTG NSG NTG FN Sbjct 475 NTGWFNSGTTNTGIGNSGGNLVTGSMGLFNSGHTNTGSFNAGSMNTGDFNSGNVNTGYFN 534 Query 478 AGSLNTGF---GAVGTG-------SGPNSGFGNAGTNNSGFFNTGVGSSGFQNGGSN--- 524 +G++NTGF G + TG NSG+ + GTNNSG+ N G +SGF N + Sbjct 535 SGNINTGFFNSGDLNTGLFNSVNQPVQNSGWLHTGTNNSGYANAGTFNSGFDNNARDEHA 594 Query 525 -----NSGLQNAVGTVIA---------AGFGNTGAQTVGIAN-SGVLN-----SGFFNSG 564 NSGL N VG A +GF N+ G AN SG +N SGFFN G Sbjct 595 EFVTGNSGLAN-VGNYNAGIINVDDHLSGFRNSVPTITGTANISGFVNAGTSISGFFNFG 653 Query 565 VHNSGGFNSENQRSGFGN 582 SG N +++ SG+ N Sbjct 654 SLMSGFANFDDEVSGYLN 671 >gi|340626569|ref|YP_004745021.1| PPE family protein [Mycobacterium canettii CIPT 140010059] gi|340004759|emb|CCC43903.1| PPE family protein [Mycobacterium canettii CIPT 140010059] Length=678 Score = 439 bits (1128), Expect = 8e-121, Method: Compositional matrix adjust. Identities = 343/678 (51%), Positives = 409/678 (61%), Gaps = 106/678 (15%) Query 1 MNYAVLPPELNSLRMFTGAGSAPMLAAAVAWDGLAAELGSAASSFGSVTSDLASQAWQGP 60 MN++VLPPE+NS MF GAG PMLAAA AW GLA +LGSAA++F +VTS LA+ +WQGP Sbjct 1 MNFSVLPPEINSALMFAGAGPGPMLAAASAWTGLAGDLGSAAAAFSAVTSQLATGSWQGP 60 Query 61 AAAAMAAAAAPYAGWLSAAAARAAGAAAQAKAVASAFEAARAATVHPLLVAANRNAFAQL 120 A+AAM AA YA WL+ AAA+A AA QA+A SAFE A AATVHP V+ANR L Sbjct 61 ASAAMTGVAASYARWLTTAAAQAEQAAGQAQAAVSAFEEALAATVHPGAVSANRGRLRSL 120 Query 121 VMSNWFGLNAPLIAAVEGAYEQMWAADVAAMVGYHSGASAAAEQLVPFQQA--------- 171 V SN G NAP IAAVE YEQMWAADVAAM+GYH ASA A L PF + Sbjct 121 VASNLLGQNAPAIAAVEAVYEQMWAADVAAMLGYHGEASAVALSLTPFTPSPSAAATPGG 180 Query 172 ---LQQLP-----------------NLGIGNIGNANLGGGNT----------GDLNTGNG 201 + P NLG+GN+G+ NLG NT GDLN G+G Sbjct 181 AVIIAGFPFLDLGNVTIGGFNLASGNLGLGNLGSFNLGSANTGSVNLGSANIGDLNLGSG 240 Query 202 NIGNTNLGSGNRGD----------ANLGSGNIGNSNVGGGNVGNGNFGSGNGRAGLPGSG 251 NIG+ NLG GN GD N GSGNIG+ N+GGGN+G+ N GSGN G Sbjct 241 NIGSYNLGGGNTGDLNPGSGNTGTLNWGSGNIGSYNLGGGNLGSYNLGSGN-----TGDT 295 Query 252 NVGNGNLGNSNLGSGNTGNSNVGFGNTGNNNVGTGNAGSGNIGAGNTGSSNWGFGNNGIG 311 N G GN GN N+G GNTGNSN GFGNTGN N G GN G N G+GN GS N GFGN G Sbjct 296 NFGGGNTGNLNVGGGNTGNSNFGFGNTGNVNFGNGNTGDTNFGSGNLGSGNIGFGNKGSH 355 Query 312 NIGFGNTGNGNIGFGLTGNNQVGIGGLNSGSGNIGLFNSGTNNVGFFNSGNGNLGIGNSS 371 NIGFGN+GN NIGFGLTG+NQ+G G LNSGSGN+G NSG N+GFFNSGN N+G+GNS Sbjct 356 NIGFGNSGNNNIGFGLTGDNQIGFGALNSGSGNLGFGNSGNGNIGFFNSGNNNIGMGNSG 415 Query 372 DANVGIGNSGATVGPFVAGHNTGFGNSGSLNTGMGNAGGVNTGFGNGGAINLGFGNSGQL 431 + G+G G A ++GFGNSG L+TG+GN+G ++TG+ N + G+ NSG Sbjct 416 N---GVGALSVEFGS-SAERSSGFGNSGELSTGIGNSGQLSTGWFNSATTSTGWFNSGTT 471 Query 432 NAGSFNAGSINTGN--------------FNSGQGNTGDFNAGVRNTGWSNSGLTNTGAFN 477 N G FN+G+ NTG FNSG NTG FNAG NTG NSG NTG FN Sbjct 472 NTGWFNSGTTNTGIGNSGGNLVTGSMGLFNSGHTNTGSFNAGSMNTGDFNSGNVNTGYFN 531 Query 478 AGSLNTGF---GAVGTG-------SGPNSGFGNAGTNNSGFFNTGVGSSGFQNGGSN--- 524 +G++NTGF G + TG NSG+ + GTNNSG+ N G +SGF N + Sbjct 532 SGNINTGFFNSGDLNTGLFNSVNQPVQNSGWLHTGTNNSGYANAGTFNSGFDNNARDEHA 591 Query 525 -----NSGLQNA---------VGTVIAAGFGNTGAQTVGIAN-SGVLN-----SGFFNSG 564 NSGL N VG + +GF N+ G AN SG +N SGFFN G Sbjct 592 EFVTGNSGLANVGNYNAGIINVGDHL-SGFRNSVPTITGTANISGFVNAGTSISGFFNFG 650 Query 565 VHNSGGFNSENQRSGFGN 582 SG N +++ SG+ N Sbjct 651 SLMSGFANFDDEVSGYLN 668 >gi|183985299|ref|YP_001853590.1| PPE family protein [Mycobacterium marinum M] gi|183178625|gb|ACC43735.1| PPE family protein [Mycobacterium marinum M] Length=729 Score = 438 bits (1126), Expect = 1e-120, Method: Compositional matrix adjust. Identities = 338/640 (53%), Positives = 402/640 (63%), Gaps = 77/640 (12%) Query 1 MNYAVLPPELNSLRMFTGAGSAPMLAAAVAWDGLAAELGSAASSFGSVTSDLASQAWQGP 60 MN+ V PPEL S R+++G GS M +AA AWDGLAAEL AASSF SVT++L + AWQG Sbjct 1 MNFLVDPPELTSARIYSGPGSGQMFSAAEAWDGLAAELRLAASSFESVTANLVAGAWQGA 60 Query 61 AAAAMAAAAAPYAGWLSAAAARAAGAAAQAKAVASAFEAARAATVHPLLVAANRNAFAQL 120 +A AMAA A P+ L A +A AAAQA+ VASAFEA RAATVHP LVAANR F L Sbjct 61 SATAMAAVATPHVRLLQGLAGQAEQAAAQARVVASAFEAVRAATVHPALVAANRAQFVSL 120 Query 121 VMSNWFGLNAPLIAAVEGAYEQMWAADVAAMVGYHSGASAAAEQLVPFQQAL-------- 172 +SN FG NAP IAAVE YE+MWA DV AMVGYHS +SAAAEQL PF + L Sbjct 121 ALSNIFGQNAPAIAAVETDYEEMWAQDVTAMVGYHSTSSAAAEQLTPFHRMLAGLSGRSV 180 Query 173 ---------------------QQLPNLGIGNIGNANLGGGNTGD---------------- 195 + L NLG+GN GN NLG GN G+ Sbjct 181 SSAVAGGRLGGFVIPGLSIGNRGLLNLGLGNTGNLNLGWGNAGNLNLGSGNTGGINLGSG 240 Query 196 --------------LNTGNGNIGNTNLGSGNRGDANLGSGNIGNSNVGGGNVGNGNFGSG 241 LN G+GNIGN NLGSGN G N+GSGNIG+ N+G GN+GN N GSG Sbjct 241 NTGSFNPGWGNAGKLNLGSGNIGNMNLGSGNTGILNVGSGNIGDFNLGSGNIGNLNLGSG 300 Query 242 NGRAGLPGSGNVGN-----GNLGNSNLGSGNTGNSNVGFGNTGNNNVGTGNAGSGNIGAG 296 N G G GN GN GN G N GSGNTG N G GN+GN+NVG GN G+ N G+G Sbjct 301 NIGKGNFGIGNTGNFNLGGGNTGGHNFGSGNTGGHNFGNGNSGNHNVGGGNYGNSNFGSG 360 Query 297 NTGSSNWGFGNNGIGNIGFGNTGNGNIGFGLTGNNQVGIGGLNSGSGNIGLFNSGTNNVG 356 N GS N+GFGN+G NIGFGN+GN NIGFGLTG+ Q+GIGGLNSGSGNIG NSG NN+G Sbjct 361 NIGSGNFGFGNSGNNNIGFGNSGNNNIGFGLTGDGQIGIGGLNSGSGNIGFGNSGNNNIG 420 Query 357 FFNSGNGNLGIGNSSDANVGIGNSGATV--GPFVAGHNTGFGNSGSLNTGMGNAGG---- 410 FFNSG+ N+G NS N G NSG GP ++ G GNSG LNTG+ N+GG Sbjct 421 FFNSGDNNVGFLNSGSENKGFINSGLGTGRGPNLS---AGIGNSGDLNTGLFNSGGSSAT 477 Query 411 VNTGFGNGGAINLGFGNSGQLNAGSFNAGSINTGNFNSGQGNTGDFNAGVRNTGWSNSGL 470 NTG+ N G+ N G GNSG N G FN+G++NTG FNSG NTG FN+G N N+G Sbjct 478 TNTGWFNSGSHNTGIGNSGDTNTGFFNSGNLNTGLFNSGDVNTGLFNSGNNNFAAFNAGS 537 Query 471 TNTGAFNAGSLNTGFGAVGTGSGPNSGFGNAGTNNSGFFNTGVGSSGFQNGGSNNSGLQN 530 TNTG+FNAGS NT A +G N+G+ +G N+G FN+G ++GF + G N+G+ + Sbjct 538 TNTGSFNAGSSNT--LAFNSGD-SNTGYAGSGNYNTGGFNSGASNTGFFDSGDLNTGIGS 594 Query 531 AVGTVIA-AGFGNTGAQTVGIANSGVLNSGFFNSGVHNSG 569 V +A +GF NTG GI +G NSGF N G +NSG Sbjct 595 PVDQNVANSGFMNTGTGNSGIRGTGDYNSGFANRGTYNSG 634 Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 161/441 (37%), Positives = 202/441 (46%), Gaps = 142/441 (32%) Query 177 NLGIGNIGNANLGGGNTGDLNTGNGNIGNTNLGSGNRGDANLGSGNIGNSNVGGGNVGNG 236 NLG GNIG N G GNTG+ N G GN G N GSGN G N G+GN GN NVGGGN GN Sbjct 296 NLGSGNIGKGNFGIGNTGNFNLGGGNTGGHNFGSGNTGGHNFGNGNSGNHNVGGGNYGNS 355 Query 237 NFGSGNGRAGLPGSGNVGNGNLGNSNLGSGNTGNSNVGFG-------------------- 276 NFGSGN GSGN G GN GN+N+G GN+GN+N+GFG Sbjct 356 NFGSGN-----IGSGNFGFGNSGNNNIGFGNSGNNNIGFGLTGDGQIGIGGLNSGSGNIG 410 Query 277 --NTGNNNVGTGNAGSGNIGAGNTGSSNWGFGNN------------GIGNIGFGNTG--- 319 N+GNNN+G N+G N+G N+GS N GF N+ GIGN G NTG Sbjct 411 FGNSGNNNIGFFNSGDNNVGFLNSGSENKGFINSGLGTGRGPNLSAGIGNSGDLNTGLFN 470 Query 320 ------NGNIGFGLTGNNQVGIGGLNSGSGNIGLFNSGTNNVGFFNSGNGNLGIGNSSDA 373 N G+ +G++ GIG NSG N G FNSG N G FNSG+ N G+ NS + Sbjct 471 SGGSSATTNTGWFNSGSHNTGIG--NSGDTNTGFFNSGNLNTGLFNSGDVNTGLFNSGNN 528 Query 374 NVGIGNSGAT-VGPFVAGH-------------------------------NTGFGNSGSL 401 N N+G+T G F AG NTGF +SG L Sbjct 529 NFAAFNAGSTNTGSFNAGSSNTLAFNSGDSNTGYAGSGNYNTGGFNSGASNTGFFDSGDL 588 Query 402 NTGMG--------NAGGVNTGFGNGG---------------------------------- 419 NTG+G N+G +NTG GN G Sbjct 589 NTGIGSPVDQNVANSGFMNTGTGNSGIRGTGDYNSGFANRGTYNSGADSAGHEAGMTSNS 648 Query 420 -AINLGFGNSGQLNAGSFNAGS-----------------INTGNFNSGQGNTGDFNAGVR 461 +N+G N+G LN G++N+G +N G NSG +TG ++G Sbjct 649 GVLNIGSNNAGFLNYGNYNSGFRNTVYPSGTPVGNTSGFVNVGAVNSGLFSTGTGDSGFG 708 Query 462 NTGWSNSGLTNTGAFNAGSLN 482 +SG+ N + +G + Sbjct 709 QLADYSSGVLNAKDYISGYFH 729 Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 113/249 (46%), Positives = 145/249 (59%), Gaps = 15/249 (6%) Query 339 NSGSGNIGLFNSGTNNVGFFNSGNGNLGIGNSSDANVGIGNSGATVGPFVAGHNTGFGNS 398 N G N+GL N+G N+G+ N+GN NLG GN+ N+G GN+G+ N G+GN+ Sbjct 201 NRGLLNLGLGNTGNLNLGWGNAGNLNLGSGNTGGINLGSGNTGS--------FNPGWGNA 252 Query 399 GSLNTGMGNAGGVNTGFGNGGAINLGFGNSGQLNAGSFNAGSINTGNFNSGQGN-----T 453 G LN G GN G +N G GN G +N+G GN G N GS N G++N G+ N G+GN T Sbjct 253 GKLNLGSGNIGNMNLGSGNTGILNVGSGNIGDFNLGSGNIGNLNLGSGNIGKGNFGIGNT 312 Query 454 GDFNAGVRNTGWSNSGLTNTGAFNAGSLNTGFGAVGTGSGPNSGFG--NAGTNNSGFFNT 511 G+FN G NTG N G NTG N G+ N+G VG G+ NS FG N G+ N GF N+ Sbjct 313 GNFNLGGGNTGGHNFGSGNTGGHNFGNGNSGNHNVGGGNYGNSNFGSGNIGSGNFGFGNS 372 Query 512 GVGSSGFQNGGSNNSGLQNAVGTVIAAGFGNTGAQTVGIANSGVLNSGFFNSGVHNSGGF 571 G + GF N G+NN G I G N+G+ +G NSG N GFFNSG +N G Sbjct 373 GNNNIGFGNSGNNNIGFGLTGDGQIGIGGLNSGSGNIGFGNSGNNNIGFFNSGDNNVGFL 432 Query 572 NSENQRSGF 580 NS ++ GF Sbjct 433 NSGSENKGF 441 Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 114/294 (39%), Positives = 151/294 (52%), Gaps = 43/294 (14%) Query 176 PNL--GIGNIGNANLG----GGNTGDLNTGNGNIGNTNLGSGNRGDANLGSGNIGNSNVG 229 PNL GIGN G+ N G GG++ NTG N G+ N G GN GD N G N GN N G Sbjct 452 PNLSAGIGNSGDLNTGLFNSGGSSATTNTGWFNSGSHNTGIGNSGDTNTGFFNSGNLNTG 511 Query 230 ---GGNVGNGNFGSGNGR--AGLPGSGNVGNGNLGNSNLGSGNTGNSNVGFGNTGNNNVG 284 G+V G F SGN A GS N G+ N G+SN + N+G+SN G+ +GN N G Sbjct 512 LFNSGDVNTGLFNSGNNNFAAFNAGSTNTGSFNAGSSNTLAFNSGDSNTGYAGSGNYNTG 571 Query 285 TGNAGSGNIGAGNTGSSNWGFG---NNGIGNIGFGNTGNGNIGFGLTGNNQVGI---GGL 338 N+G+ N G ++G N G G + + N GF NTG GN G TG+ G G Sbjct 572 GFNSGASNTGFFDSGDLNTGIGSPVDQNVANSGFMNTGTGNSGIRGTGDYNSGFANRGTY 631 Query 339 NSG----------SGNIGLFNSGTNNVGFFNSGNGNLGIGNSSDANVGIGNSGATVGPFV 388 NSG + N G+ N G+NN GF N GN N G N+ + SG VG Sbjct 632 NSGADSAGHEAGMTSNSGVLNIGSNNAGFLNYGNYNSGFRNT------VYPSGTPVG--- 682 Query 389 AGHNTGFGNSGSLNTGMGNAGGVNTGFGNGGAINLGFGNSGQLNAGSFNAGSIN 442 + +GF N G++N+G+ + G ++GFG L +SG LNA + +G + Sbjct 683 --NTSGFVNVGAVNSGLFSTGTGDSGFG-----QLADYSSGVLNAKDYISGYFH 729 >gi|254364419|ref|ZP_04980465.1| PPE family protein [Mycobacterium tuberculosis str. Haarlem] gi|134149933|gb|EBA41978.1| PPE family protein [Mycobacterium tuberculosis str. Haarlem] Length=681 Score = 436 bits (1121), Expect = 6e-120, Method: Compositional matrix adjust. Identities = 341/678 (51%), Positives = 406/678 (60%), Gaps = 106/678 (15%) Query 1 MNYAVLPPELNSLRMFTGAGSAPMLAAAVAWDGLAAELGSAASSFGSVTSDLASQAWQGP 60 MN++VLPPE+NS MF GAG PMLAAA AW GLA +L SAA+SF +VTS LA+ +WQGP Sbjct 4 MNFSVLPPEINSALMFAGAGPGPMLAAASAWTGLAGDLHSAAASFSAVTSQLATGSWQGP 63 Query 61 AAAAMAAAAAPYAGWLSAAAARAAGAAAQAKAVASAFEAARAATVHPLLVAANRNAFAQL 120 A+AAM AA YA WL+ AAA+A AA QA+A SAFEAA AATVHP V+ANR L Sbjct 64 ASAAMTGVAASYARWLTTAAAQAEQAAGQAQAAVSAFEAALAATVHPGAVSANRGRLRSL 123 Query 121 VMSNWFGLNAPLIAAVEGAYEQMWAADVAAMVGYHSGASAAAEQLVPFQQA--------- 171 V SN G NAP IAAVE YEQMWAADVAAM+GYH ASA A L PF + Sbjct 124 VASNLLGQNAPAIAAVEAVYEQMWAADVAAMLGYHGEASAVALSLTPFTPSPSAAATPGG 183 Query 172 ---LQQLP-----------------NLGIGNIGNANLGGGNTGDLNTGNGNIGNTNLGSG 211 + P NLG+GN+G+ N G NTG +N GN NIG+ NLGSG Sbjct 184 AVIIAGFPFLDLGNVTIGGFNLASGNLGLGNLGSFNPGSANTGSVNLGNANIGDLNLGSG 243 Query 212 NRGDANL--------------------GSGNIGNSNVGGGNVGNGNFGSGNGRAGLPGSG 251 N G NL GSGNIG+ N+GGGN+G+ N GSGN G Sbjct 244 NIGSYNLGGGNTGDLNPGSGNTGTLNWGSGNIGSYNLGGGNLGSYNLGSGN-----TGDT 298 Query 252 NVGNGNLGNSNLGSGNTGNSNVGFGNTGNNNVGTGNAGSGNIGAGNTGSSNWGFGNNGIG 311 N G GN GN N+G GNTGNSN GFGNTGN N G GN G N G+GN GS N GFGN G Sbjct 299 NFGGGNTGNLNVGGGNTGNSNFGFGNTGNVNFGNGNTGDTNFGSGNLGSGNIGFGNKGSH 358 Query 312 NIGFGNTGNGNIGFGLTGNNQVGIGGLNSGSGNIGLFNSGTNNVGFFNSGNGNLGIGNSS 371 NIGFGN+GN NIGFGLTG+NQ+G G LNSGSGN+G NSG N+GFFNSGN N+G+GNS Sbjct 359 NIGFGNSGNNNIGFGLTGDNQIGFGALNSGSGNLGFGNSGNGNIGFFNSGNNNIGMGNSG 418 Query 372 DANVGIGNSGATVGPFVAGHNTGFGNSGSLNTGMGNAGGVNTGFGNGGAINLGFGNSGQL 431 + G+G G A ++GFGNSG L+TG+GN+G ++TG+ N + G+ NSG Sbjct 419 N---GVGALSVEFGS-SAERSSGFGNSGELSTGIGNSGQLSTGWFNSATTSTGWFNSGTT 474 Query 432 NAGSFNAGSINTGN--------------FNSGQGNTGDFNAGVRNTGWSNSGLTNTGAFN 477 N G FN+G+ NTG FNSG NTG FNAG NTG NSG NTG FN Sbjct 475 NTGWFNSGTTNTGIGNSGGNLVTGSMGLFNSGHTNTGSFNAGSMNTGDFNSGNVNTGYFN 534 Query 478 AGSLNTGF---GAVGTG-------SGPNSGFGNAGTNNSGFFNTGVGSSGFQNGGSN--- 524 + ++NTGF G + TG NSG+ + GTNNSG+ N G +SGF N + Sbjct 535 SDNINTGFFNSGDLNTGLFNSVNQPVQNSGWLHTGTNNSGYANAGTFNSGFDNNARDEHA 594 Query 525 -----NSGLQNA---------VGTVIAAGFGNTGAQTVGIAN-SGVLN-----SGFFNSG 564 NSGL N VG + +GF N+ G AN SG +N SGFFN G Sbjct 595 EFVTGNSGLANVGNYNAGIINVGDHL-SGFRNSVPTITGTANISGFVNAGTSISGFFNFG 653 Query 565 VHNSGGFNSENQRSGFGN 582 SG N +++ SG+ N Sbjct 654 SLMSGFANFDDEVSGYLN 671 >gi|183981319|ref|YP_001849610.1| PPE family protein [Mycobacterium marinum M] gi|183174645|gb|ACC39755.1| PPE family protein [Mycobacterium marinum M] Length=694 Score = 435 bits (1119), Expect = 1e-119, Method: Compositional matrix adjust. Identities = 332/647 (52%), Positives = 390/647 (61%), Gaps = 99/647 (15%) Query 1 MNYAVLPPELNSLRMFTGAGSAPMLAAAVAWDGLAAELGSAASSFGSVTSDLASQAWQGP 60 MN++V+PPE+NS+ MF GAGS PML AA W L+AEL SAA+ F S+TS L Q WQG Sbjct 1 MNFSVMPPEINSVLMFAGAGSEPMLLAARGWSELSAELQSAAAGFASLTSGLTGQFWQGA 60 Query 61 AAAAMAAAAAPYAGWLSAAAARAAGAAAQAKAVASAFEAARAATVHPLLVAANRNAFAQL 120 AA AM A YA LSA AA+A +AQA VA+ F+AARAA VHPL VAANR L Sbjct 61 AAQAMTGVAQAYAAHLSATAAQAGQVSAQANGVAAVFDAARAAIVHPLQVAANRTQLVSL 120 Query 121 VMSNWFGLNAPLIAAVEGAYEQMWAADVAAMVGYHSGASAAAEQLVPFQQALQ----QLP 176 V+SN FG NAP IAAVE YE+MWA DV+AM GY++ ASAA QL P++ + LP Sbjct 121 VVSNLFGQNAPAIAAVEANYEEMWAQDVSAMSGYYTAASAAVAQLTPWELTSEGIVIPLP 180 Query 177 ----------------NLGIGNIGNANLGGGNTGDLNTGNGNIGNT-------------- 206 NLGIGN+G+ NLG GNTG N G GN G Sbjct 181 DHIGVLNFTPGNIGSLNLGIGNVGDLNLGSGNTGAGNLGLGNFGELNLGSGNGNSGNGDS 240 Query 207 --------NLGSGNRGDANLGSGNIGNSNVGGGNVGNGNFGSGN-GRAGL----PGSGNV 253 NLGSGN GDANLGSGN+G N+G GN G+ NFG GN G L GS N Sbjct 241 TTPLLASFNLGSGNLGDANLGSGNLGMLNLGSGNKGDTNFGFGNIGDLNLGSGNIGSHNF 300 Query 254 GNGNLGNSNLGSGNTGNSNVGFGNTGNNNVGTGNAGSGNIGAGNTGSSNWGFGNNGIGNI 313 G+GN G++NLGSGNTGNSN G GNTG+ N+G+GN GS N G+GN G +N G+GN G N Sbjct 301 GSGNSGSANLGSGNTGNSNFGLGNTGSTNLGSGNTGSANFGSGNLGDANVGWGNLGSHNF 360 Query 314 GFGNTGNGNIGFGLTGNNQVGI--GGLNSGSGNIGLFNSGTNNVGFFNSGNGNLGIGNSS 371 GFGN G+ NIG GLTG+NQ+GI G LNSG GNIGLFNSG +NVGFFNSG Sbjct 361 GFGNNGSNNIGIGLTGDNQIGINFGALNSGHGNIGLFNSGNDNVGFFNSG---------- 410 Query 372 DANVGIGNSGATVGP-----FVAGH-NTGFGNSGSLNTGMGNAGGVNTGFGNGGAINLGF 425 D N+GI NSG VGP F +G N+G G+SG+LNTG GN+G NTG+ N G N G Sbjct 411 DKNIGIANSGLGVGPLSTEFFTSGEFNSGVGSSGTLNTGWGNSGSTNTGYFNAGHTNTGL 470 Query 426 GNSGQLNAGSFNAGSINTGNFNSGQGNTGDFNAGVRNTGWSNSGLTNTGAFNAGSLNTGF 485 NSG + G FN+G NTG FNSG NTG FNAG N G N G TNTG +N+GS+NTG+ Sbjct 471 FNSGDTSTGLFNSGDTNTGLFNSGDTNTGFFNAGTANFGSFNGGSTNTGDWNSGSINTGY 530 Query 486 ------------------GAVGTGSGP--NSG--------FGNAGTNNSGFFNTGVGSSG 517 GA P NSG FG G N SG FN GVG+SG Sbjct 531 ANSGGTNTGILNAGNLNTGAFSPFDQPVVNSGFSNDFDGPFGKGGVNQSGAFNQGVGNSG 590 Query 518 FQNGGSNNSGLQNAVGTVIAAGFGNTGAQTVGIANSGVLNSGFFNSG 564 F + G N G GTV ++GF N G G N+G +SGF N+G Sbjct 591 FDS-GDNIKG-----GTVSSSGFENHGNFGSGFLNAGSFSSGFRNTG 631 >gi|183984524|ref|YP_001852815.1| PPE family protein [Mycobacterium marinum M] gi|183177850|gb|ACC42960.1| PPE family protein [Mycobacterium marinum M] Length=668 Score = 433 bits (1114), Expect = 3e-119, Method: Compositional matrix adjust. Identities = 375/680 (56%), Positives = 421/680 (62%), Gaps = 110/680 (16%) Query 1 MNYAVLPPELNSLRMFTGAGSAPMLAAAVAWDGLAAELGSAASSFGSVTSDLASQAWQGP 60 MN+++ PPE+NSLRMFTGAGSAPML AA AW+GLA ELGSAA SF SVTS L QAWQGP Sbjct 1 MNFSIFPPEINSLRMFTGAGSAPMLQAAAAWEGLAGELGSAADSFASVTSGLVGQAWQGP 60 Query 61 AAAAMAAAAAPYAGWLSAAAARAAGAAAQAKAVASAFEAARAATVHPLLVAANRNAFAQL 120 A+AAMAAA APY WLSAAAA+A GAA AK VASAFEAARAATV P VAANRNA Q+ Sbjct 61 ASAAMAAAVAPYTSWLSAAAAQAVGAAGAAKMVASAFEAARAATVLPAAVAANRNALVQM 120 Query 121 VMSNWFGLNAPLIAAVEGAYEQMWAADVAAMVGYHSGASAAAEQLVPFQQALQQLPNL-- 178 VMSN FG NAP IAA E AYE+MWA DVAAM GYHSGASA A L P++Q LQ +P L Sbjct 121 VMSNIFGQNAPAIAAAEAAYEEMWAQDVAAMFGYHSGASAVAAALSPWEQLLQNVPALSP 180 Query 179 --GIGNIGNANLGGGNTGDLNTGNGNIGNTNLGSGNRGDANLGS---------------- 220 IGN+G NLG GNTG N GNGN GN N G GN G+ N GS Sbjct 181 LAAIGNLGAGNLGFGNTGIANLGNGNTGNLNFGGGNIGNFNFGSGNRGGNVNFGNGNNGF 240 Query 221 -----GNIGNSNVGGGNVGNGNFGSGNGRAGLPGSGNVGN----------GNLGNSNLGS 265 GNIG++N G GN GNGN G GN ++ G N+G GN GN N+GS Sbjct 241 FNLGGGNIGSNNFGSGNRGNGNIGFGNYQS--TGGANIGGGNSGSGNKGFGNTGNYNIGS 298 Query 266 GNTGNSNVGFGNTGNNNVGTGNAGSGNIGAGNTGSSNWGFGNNGIGNIGFGNTGNGNIGF 325 GN G+ N G GN G+NN G GN SGN+G GN G++N GFGN G GN+GFGNTGN N G Sbjct 299 GNFGSFNFGDGNRGSNNFGFGNTNSGNVGFGNLGANNVGFGNLGSGNVGFGNTGNNNFGI 358 Query 326 GLTGNNQVGI--GGLNSGSGNIGLFNSGTNNVGFFNSGNGNLGIGNSSDANVGIGNSGAT 383 GL+GN+QVGI GLN GSGNIGLFNSG NNVGFFNSG+GN GIGNS D N GIGNSG+ Sbjct 359 GLSGNDQVGINFNGLNGGSGNIGLFNSGNNNVGFFNSGDGNWGIGNSGDTNTGIGNSGS- 417 Query 384 VGPFVAGHNTGFGNSGSLNTGMG--------------------NAGGVNTGFGNGGAINL 423 NTGF N+ SLNTGM NAG N G GN G+ N+ Sbjct 418 -------FNTGFVNAASLNTGMANSANTCLGVGNSGAGDVGFMNAGHDNVGLGNAGSFNM 470 Query 424 GFGNSGQLNAGSFNAGSINTGNFNSGQGNTGDFNAGVRNTGWSNSGLTNTGAFNAGSLNT 483 GFGN+G N G NAG N G NSG NTG N+G NTG+ NSG TNTGA N+G +NT Sbjct 471 GFGNAGSGNVGYENAGGANVGFGNSGSDNTGFLNSGSVNTGFLNSGSTNTGAGNSGEVNT 530 Query 484 GFGAVGTGSGPNSGFGNAGT----------NNSGFFNTGVGSSGFQNGGSNNSGLQNAVG 533 GFG NSGFGN G+ +NSGF NTG S GF N G+N +G QN G Sbjct 531 GFGIATDSGATNSGFGNTGSGNSGFNNDGNDNSGFQNTGTSSEGFGNVGNNQTGFQNTGG 590 Query 534 TVIAAGFGNTGAQTVGIANS-------------------------------GVLNSGFFN 562 T GF NTG VG+ NS G NSGF N Sbjct 591 T--NTGFFNTGTNDVGVGNSANLNIGFWNSTGAGNVGVMNTGTDNSGFIQTGTANSGFAN 648 Query 563 SGVHNSGGFNSENQRSGFGN 582 SG +SGG N +Q+SGFGN Sbjct 649 SGTSSSGGLNKGDQQSGFGN 668 >gi|289568706|ref|ZP_06448933.1| PPE family protein [Mycobacterium tuberculosis T17] gi|289542460|gb|EFD46108.1| PPE family protein [Mycobacterium tuberculosis T17] Length=656 Score = 429 bits (1104), Expect = 5e-118, Method: Compositional matrix adjust. Identities = 358/663 (54%), Positives = 419/663 (64%), Gaps = 99/663 (14%) Query 3 YAVLPPELNSLRMFTGAGSAPMLAAAVAWDGLAAELGSAASSFGSVTSDLASQAWQGPAA 62 +A LPPE NSLRM+ GAGS P+LAAA AWDGLA EL +AASSFGSVTS+LA AWQGPA+ Sbjct 5 FAWLPPETNSLRMYLGAGSRPLLAAAGAWDGLAEELHAAASSFGSVTSELAGGAWQGPAS 64 Query 63 AAMAAAAAPYAGWLSAAAARAAGAAAQAKAVASAFEAARAATVHPLLVAANRNAFAQLVM 122 AAMA AA PYA WL+AA A+A AA QA+A A AFE A A VHP +V ANR L + Sbjct 65 AAMANAAGPYASWLTAAGAQAELAARQARAAAGAFEEALAGVVHPAVVQANRVRTWLLAV 124 Query 123 SNWFGLNAPLIAAVEGAYEQMWAADVAAMVGYHSGASAAAEQLVPFQQALQQLPNLGIGN 182 SN FG NAP IAA+E YEQMWA DVA M GYH+ +SAAA QL +Q AL + NLG+GN Sbjct 125 SNVFGQNAPAIAAMESTYEQMWAQDVAVMAGYHAASSAAAAQLASWQPALPNI-NLGVGN 183 Query 183 IGNANLGGGNTGDLNTGNGNIGNTNLGSGNRGDANLGSGNIGNSNVGGGNVGNGNFGSGN 242 IGN N+G GNTGD N GNGN+GN N G GN + G I + NVG GN+GN N GSGN Sbjct 184 IGNLNVGNGNTGDYNLGNGNLGNANFGGGNGSAFH---GQISSFNVGSGNIGNFNLGSGN 240 Query 243 GRAGL-PGSGNVGNGNLGNSNLGSGNTGN----------SNVGFGNTGNN---------- 281 G G+ P S NVG+GN+GN+N+G GN+G+ +N+G GN G N Sbjct 241 GNVGIGPSSFNVGSGNIGNANVGGGNSGDNNFGFGNFGNANIGIGNAGPNMSSPAVPTPG 300 Query 282 ----------------------NVGTGNAGSGNIGAGNTGSSNWGFGNNGIGNIGFGNTG 319 N+G GN G GN+G GN+GS N+GFGN+G N GFGNTG Sbjct 301 NGNVGIGNGGNGNFGGGNTGNANIGLGNVGDGNVGFGNSGSYNFGFGNSGSYNFGFGNTG 360 Query 320 NGNIGFGLTGNNQVGIGGLNSGSGNIGLFNSGTNNVGFFNSGNGNLGIGNSSDANVGIGN 379 N NIG GLTG+NQ+G GGLNSGSGNIG NSGT N+GFFNSG+GN G+GNS N G+ N Sbjct 361 NNNIGIGLTGSNQIGFGGLNSGSGNIGFGNSGTGNIGFFNSGSGNFGVGNSGVTNTGVAN 420 Query 380 SGATVGPFVAGHNTGFGNSGSLNTGMGNAGGVNTGFGNGGAINLGFGNSGQLNAGSFNAG 439 SG NTGFGNSG +NTG GNA VNTGFGN G N G GN+G N G+FN G Sbjct 421 SGNI--------NTGFGNSGFINTGFGNALSVNTGFGNSGQANTGIGNAGDFNTGNFNGG 472 Query 440 SINTGNFNSGQGNTGDFNAGVRNTGWSNSGLT----------NTGAFNAGSLNTGFGAVG 489 INTG+FNSG N+G FN G N+G+ NSGLT NTG FNAG+LNTGFG Sbjct 473 IINTGSFNSGAFNSGSFNGGDANSGFLNSGLTNTGFANSGNINTGGFNAGNLNTGFGNTT 532 Query 490 TGSGPNSGFGNAGTNNSGFFNTGVGS-----------SGFQNGGSNNSGLQNAVGTVIAA 538 G G NSGFGNAG+ NSGF N+G G+ SGF N G + +G N+V + + Sbjct 533 DGLGENSGFGNAGSGNSGFNNSGKGNSGAQNVGNLQISGFANSGQSVTGYNNSV--SVTS 590 Query 539 GFGNTGAQTV-----GIANSGVLNSGF---------------F-NSGVHNSGGFNSENQR 577 GFGN G G N+G L SGF F NSG +SGGFNS + Sbjct 591 GFGNKGTGLFSGFMSGFGNTGFLQSGFGNLEANPDNNSATSGFGNSGKQDSGGFNSIDFV 650 Query 578 SGF 580 SGF Sbjct 651 SGF 653 Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 139/351 (40%), Positives = 170/351 (49%), Gaps = 100/351 (28%) Query 258 LGNSNLGSGNTGNSNVGFGNTGN------------NNVGTGNAGSGNIGAGNTGSSNWGF 305 L N NLG GN GN NVG GNTG+ G G+A G I + N GS N Sbjct 174 LPNINLGVGNIGNLNVGNGNTGDYNLGNGNLGNANFGGGNGSAFHGQISSFNVGSGN--- 230 Query 306 GNNGIGNIGFGNTGNGNIGFGLTGNNQVGIGGLNSGSGNIGLFNSGTNNVGFFNSGNGNL 365 IGN G +GNGN+G +G N GSGNIG NVG NSG+ N Sbjct 231 ----IGNFNLG-SGNGNVG--------IGPSSFNVGSGNIG-----NANVGGGNSGDNNF 272 Query 366 GIGNSSDANVGIGNSGATVG-PFVA-------------GHNTGFGNSGSLNTGMGNAGGV 411 G GN +AN+GIGN+G + P V N G GN+G+ N G+GN G Sbjct 273 GFGNFGNANIGIGNAGPNMSSPAVPTPGNGNVGIGNGGNGNFGGGNTGNANIGLGNVGDG 332 Query 412 NTGFGNGGAINLGFGNSGQLNAGSFNAGSINTGNFNSGQGNTGDFNAGVRNTGWSNSGLT 471 N GFGN G+ N GFGNSG +N G GNTG+ N G+ GLT Sbjct 333 NVGFGNSGSYNFGFGNSGS---------------YNFGFGNTGNNNIGI--------GLT 369 Query 472 NTGAFNAGSLNTGFGAVGTGSGPNSGFGNAGTNNSGFFNTGVGSSGFQNGGSNNSGLQNA 531 GS GFG + +GSG N GFGN+GT N GFFN+G G+ Sbjct 370 -------GSNQIGFGGLNSGSG-NIGFGNSGTGNIGFFNSGSGN---------------- 405 Query 532 VGTVIAAGFGNTGAQTVGIANSGVLNSGFFNSGVHNSGGFNSENQRSGFGN 582 G GN+G G+ANSG +N+GF NSG N+G N+ + +GFGN Sbjct 406 ------FGVGNSGVTNTGVANSGNINTGFGNSGFINTGFGNALSVNTGFGN 450 >gi|31792734|ref|NP_855227.1| PPE family protein [Mycobacterium bovis AF2122/97] gi|31618324|emb|CAD96242.1| PPE FAMILY PROTEIN [Mycobacterium bovis AF2122/97] Length=678 Score = 428 bits (1100), Expect = 2e-117, Method: Compositional matrix adjust. Identities = 344/678 (51%), Positives = 409/678 (61%), Gaps = 106/678 (15%) Query 1 MNYAVLPPELNSLRMFTGAGSAPMLAAAVAWDGLAAELGSAASSFGSVTSDLASQAWQGP 60 MN++VLPPE+NS MF GAG PMLAAA AW GLA +LGSAA+SF +VTS LA+ +WQGP Sbjct 1 MNFSVLPPEINSALMFAGAGPGPMLAAASAWTGLAGDLGSAAASFSAVTSQLATGSWQGP 60 Query 61 AAAAMAAAAAPYAGWLSAAAARAAGAAAQAKAVASAFEAARAATVHPLLVAANRNAFAQL 120 A+AAM AAA YA WL+ AAA+A AA QA+A SAFEAA AATVHP V+ANR L Sbjct 61 ASAAMTGAAASYARWLTTAAAQAEQAAGQAQAAVSAFEAALAATVHPGAVSANRGRLRSL 120 Query 121 VMSNWFGLNAPLIAAVEGAYEQMWAADVAAMVGYHSGASAAAEQLVPFQQA--------- 171 V SN G NAP IAAVE YEQMWAADVAAM+GYH ASA A L PF + Sbjct 121 VASNLLGQNAPAIAAVEAVYEQMWAADVAAMLGYHGEASAVALSLTPFTPSPSAAATPGG 180 Query 172 ---LQQLP-----------------NLGIGNIGNANLGGGNTGDLNTGNGNIGNTNLGSG 211 + P NLG+GN+G+ N G NTG +N GN NIG+ NLGSG Sbjct 181 AVIIAGFPFLDLGNVTIGGFNLASGNLGLGNLGSFNPGSANTGSVNLGNANIGDLNLGSG 240 Query 212 NRGDANL--------------------GSGNIGNSNVGGGNVGNGNFGSGNGRAGLPGSG 251 N G NL GSGNIG+ N+GGGN+G+ N GSGN G Sbjct 241 NIGSYNLGGGNTGDLNPGSGNTGTLNWGSGNIGSYNLGGGNLGSYNLGSGN-----TGDT 295 Query 252 NVGNGNLGNSNLGSGNTGNSNVGFGNTGNNNVGTGNAGSGNIGAGNTGSSNWGFGNNGIG 311 N G GN GN N+G GNTGNSN GFGNTGN N G GN G N G+GN GS N GFGN G Sbjct 296 NFGGGNTGNLNVGGGNTGNSNFGFGNTGNVNFGNGNTGDTNFGSGNLGSGNIGFGNKGSH 355 Query 312 NIGFGNTGNGNIGFGLTGNNQVGIGGLNSGSGNIGLFNSGTNNVGFFNSGNGNLGIGNSS 371 NIGFGN+GN NIGFGLTG+NQ+G G LNSGSGN+G NSG N+GFFNSGN N+G+GNS Sbjct 356 NIGFGNSGNNNIGFGLTGDNQIGFGALNSGSGNLGFGNSGNGNIGFFNSGNNNIGMGNSG 415 Query 372 DANVGIGNSGATVGPFVAGHNTGFGNSGSLNTGMGNAGGVNTGFGNGGAINLGFGNSGQL 431 + G+G G A ++GFGNSG L+TG+GN+G ++TG+ N + G+ NSG Sbjct 416 N---GVGALSVEFGS-SAERSSGFGNSGELSTGIGNSGQLSTGWFNSATTSTGWFNSGTT 471 Query 432 NAGSFNAGSINTGN--------------FNSGQGNTGDFNAGVRNTGWSNSGLTNTGAFN 477 N G FN+G+ NTG FNSG NTG FNAG NTG NSG NTG FN Sbjct 472 NTGWFNSGTTNTGIGNSGGNLVTGSMGLFNSGHTNTGSFNAGSMNTGDFNSGNVNTGYFN 531 Query 478 AGSLNTGF---GAVGTG-------SGPNSGFGNAGTNNSGFFNTGVGSSGFQNGGSN--- 524 +G++NTGF G + TG NSG+ + GTNNSG+ N G +SGF N + Sbjct 532 SGNINTGFFNSGDLNTGLFNSVNQPVQNSGWLHTGTNNSGYANAGTFNSGFDNNARDEHA 591 Query 525 -----NSGLQNA---------VGTVIAAGFGNTGAQTVGIAN-SGVLN-----SGFFNSG 564 NSGL N VG + +GF N+ G AN SG +N SGFFN G Sbjct 592 EFVTGNSGLANVGNYNAGIINVGDHL-SGFRNSVPTITGTANISGFVNAGTSISGFFNFG 650 Query 565 VHNSGGFNSENQRSGFGN 582 SG N +++ SG+ N Sbjct 651 SLMSGFANFDDEVSGYLN 668 >gi|289442157|ref|ZP_06431901.1| predicted protein [Mycobacterium tuberculosis T46] gi|289415076|gb|EFD12316.1| predicted protein [Mycobacterium tuberculosis T46] Length=649 Score = 427 bits (1099), Expect = 2e-117, Method: Compositional matrix adjust. Identities = 351/660 (54%), Positives = 413/660 (63%), Gaps = 99/660 (15%) Query 6 LPPELNSLRMFTGAGSAPMLAAAVAWDGLAAELGSAASSFGSVTSDLASQAWQGPAAAAM 65 +PPE NSLRM+ GAGS P+LAAA AWDGLA EL +AASSFGSVTS+LA AWQGPA+AAM Sbjct 1 MPPETNSLRMYLGAGSRPLLAAAGAWDGLAEELHAAASSFGSVTSELAGGAWQGPASAAM 60 Query 66 AAAAAPYAGWLSAAAARAAGAAAQAKAVASAFEAARAATVHPLLVAANRNAFAQLVMSNW 125 A AA PYA WL+AA A+A AA QA+A A AFE A A VHP +V ANR L +SN Sbjct 61 ANAAGPYASWLTAAGAQAELAARQARAAAGAFEEALAGVVHPAVVQANRVRTWLLAVSNV 120 Query 126 FGLNAPLIAAVEGAYEQMWAADVAAMVGYHSGASAAAEQLVPFQQALQQLPNLGIGNIGN 185 FG NAP IAA+E YEQMWA DVA M GYH+ +SAAA QL +Q AL + NLG+GNIGN Sbjct 121 FGQNAPAIAAMESTYEQMWAQDVAVMAGYHAASSAAAAQLASWQPALPNI-NLGVGNIGN 179 Query 186 ANLGGGNTGDLNTGNGNIGNTNLGSGNRGDANLGSGNIGNSNVGGGNVGNGNFGSGNGRA 245 N+G GNTGD N GN GN + G+ + G I + NVG GN+GN N GSGNG Sbjct 180 LNVGNGNTGDYNLGN---GNLGNANFGGGNGSAFHGQISSFNVGSGNIGNFNLGSGNGNV 236 Query 246 GL-PGSGNVGNGNLGNSNLGSGNTGN----------SNVGFGNTGNN------------- 281 G+ P S NVG+GN+GN+N+G GN+G+ +N+G GN G N Sbjct 237 GIGPSSFNVGSGNIGNANVGGGNSGDNNFGFGNFGNANIGIGNAGPNMSSPAVPTPGNGN 296 Query 282 -------------------NVGTGNAGSGNIGAGNTGSSNWGFGNNGIGNIGFGNTGNGN 322 N+G GN G GN+G GN+GS N+GFGN+G N GFGNTGN N Sbjct 297 VGIGNGGNGNFGGGNTGNANIGLGNVGDGNVGFGNSGSYNFGFGNSGSYNFGFGNTGNNN 356 Query 323 IGFGLTGNNQVGIGGLNSGSGNIGLFNSGTNNVGFFNSGNGNLGIGNSSDANVGIGNSGA 382 IG GLTG+NQ+G GGLNSGSGNIG NSGT N+GFFNSG+GN G+GNS N G+ NSG Sbjct 357 IGIGLTGSNQIGFGGLNSGSGNIGFGNSGTGNIGFFNSGSGNFGVGNSGVTNTGVANSGN 416 Query 383 TVGPFVAGHNTGFGNSGSLNTGMGNAGGVNTGFGNGGAINLGFGNSGQLNAGSFNAGSIN 442 NTGFGNSG +NTG GNA VNTGFGN G N G GN+G N G+FN G IN Sbjct 417 I--------NTGFGNSGFINTGFGNALSVNTGFGNSGQANTGIGNAGDFNTGNFNGGIIN 468 Query 443 TGNFNSGQGNTGDFNAGVRNTGWSNSGLT----------NTGAFNAGSLNTGFGAVGTGS 492 TG+FNSG N+G FN G N+G+ NSGLT NTG FNAG+LNTGFG G Sbjct 469 TGSFNSGAFNSGSFNGGDANSGFLNSGLTNTGFANSGNINTGGFNAGNLNTGFGNTTDGL 528 Query 493 GPNSGFGNAGTNNSGFFNTGVGS-----------SGFQNGGSNNSGLQNAVGTVIAAGFG 541 G NSGFGNAG+ NSGF N+G G+ SGF N G + +G N+V + +GFG Sbjct 529 GENSGFGNAGSGNSGFNNSGKGNSGAQNVGNLQISGFANSGQSVTGYNNSV--SVTSGFG 586 Query 542 NTGAQTV-----GIANSGVLNSGF---------------F-NSGVHNSGGFNSENQRSGF 580 N G G N+G L SGF F NSG +SGGFNS + SGF Sbjct 587 NKGTGLFSGFMSGFGNTGFLQSGFGNLEANPDNNSATSGFGNSGKQDSGGFNSIDFVSGF 646 Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 139/351 (40%), Positives = 170/351 (49%), Gaps = 100/351 (28%) Query 258 LGNSNLGSGNTGNSNVGFGNTGN------------NNVGTGNAGSGNIGAGNTGSSNWGF 305 L N NLG GN GN NVG GNTG+ G G+A G I + N GS N Sbjct 167 LPNINLGVGNIGNLNVGNGNTGDYNLGNGNLGNANFGGGNGSAFHGQISSFNVGSGN--- 223 Query 306 GNNGIGNIGFGNTGNGNIGFGLTGNNQVGIGGLNSGSGNIGLFNSGTNNVGFFNSGNGNL 365 IGN G +GNGN+G +G N GSGNIG NVG NSG+ N Sbjct 224 ----IGNFNLG-SGNGNVG--------IGPSSFNVGSGNIG-----NANVGGGNSGDNNF 265 Query 366 GIGNSSDANVGIGNSGATVG-PFVA-------------GHNTGFGNSGSLNTGMGNAGGV 411 G GN +AN+GIGN+G + P V N G GN+G+ N G+GN G Sbjct 266 GFGNFGNANIGIGNAGPNMSSPAVPTPGNGNVGIGNGGNGNFGGGNTGNANIGLGNVGDG 325 Query 412 NTGFGNGGAINLGFGNSGQLNAGSFNAGSINTGNFNSGQGNTGDFNAGVRNTGWSNSGLT 471 N GFGN G+ N GFGNSG +N G GNTG+ N G+ GLT Sbjct 326 NVGFGNSGSYNFGFGNSGS---------------YNFGFGNTGNNNIGI--------GLT 362 Query 472 NTGAFNAGSLNTGFGAVGTGSGPNSGFGNAGTNNSGFFNTGVGSSGFQNGGSNNSGLQNA 531 GS GFG + +GSG N GFGN+GT N GFFN+G G+ Sbjct 363 -------GSNQIGFGGLNSGSG-NIGFGNSGTGNIGFFNSGSGN---------------- 398 Query 532 VGTVIAAGFGNTGAQTVGIANSGVLNSGFFNSGVHNSGGFNSENQRSGFGN 582 G GN+G G+ANSG +N+GF NSG N+G N+ + +GFGN Sbjct 399 ------FGVGNSGVTNTGVANSGNINTGFGNSGFINTGFGNALSVNTGFGN 443 >gi|183983645|ref|YP_001851936.1| PPE family protein [Mycobacterium marinum M] gi|183176971|gb|ACC42081.1| PPE family protein [Mycobacterium marinum M] Length=636 Score = 426 bits (1094), Expect = 7e-117, Method: Compositional matrix adjust. Identities = 353/648 (55%), Positives = 403/648 (63%), Gaps = 115/648 (17%) Query 1 MNYAVLPPELNSLRMFTGAGSAPMLAAAVAWDGLAAELGSAASSFGSVTSDLASQAWQGP 60 MN+AVLPPE+NS+RMF+GAGS PMLAAA AWDGL+AELG AA SF SVTS LA Sbjct 1 MNFAVLPPEINSVRMFSGAGSEPMLAAAAAWDGLSAELGEAAESFASVTSGLAGAGQAWQ 60 Query 61 AAAAMAAAAA--PYAGWLSAAAARAAGAAAQAKAVASAFEAARAATVHPLLVAANRNAFA 118 AAA A AA PYA WL AAAARAAGA+A AK VASAFEAARAA VHPL VAANRN F Sbjct 61 GAAASAMVAAAGPYASWLGAAAARAAGASASAKVVASAFEAARAAMVHPLAVAANRNGFV 120 Query 119 QLVMSNWFGLNAPLIAAVEGAYEQMWAADVAAMVGYHSGASAAAEQLVPFQ--------- 169 QLVMSN FG NAP IAA EG YEQMWAADVAAM GYH GASAAA QL +Q Sbjct 121 QLVMSNLFGQNAPAIAAAEGVYEQMWAADVAAMAGYHGGASAAAAQLSSWQGMVSGVLSG 180 Query 170 -------------------------------------QALQQLPNLGIGNIGNANLGGGN 192 A Q NLG GNIG+ NLG GN Sbjct 181 VPGVSGLVGGAAPAAAAVTTPLAGAAQAVASQAASVVPAPLQGINLGFGNIGSLNLGSGN 240 Query 193 TGDLNTGNGNIGNTNLGSGNRGDANLGSGNIGNSNVGGGNVGNGNFGSGNGRAGLPGSGN 252 GD N G+GNIGN N GSGN G NLG GN G+ N+G GN+GN N GSGN GS N Sbjct 241 IGDGNLGSGNIGNINFGSGNIGGTNLGGGNQGDFNLGSGNIGNLNLGSGN-----FGSQN 295 Query 253 VGNGNLGNSNLGSGNTGNSNVGFGNTGNNNVGTGNAGSGNIGAGNTGSSNWGFGNNGIGN 312 +G+GN+G+ N G GN GN+N+G GN G+ N G+GN GS N G+GN+GS+N GFGN G N Sbjct 296 LGSGNIGSINFGVGNIGNTNIGSGNIGDTNFGSGNIGSLNFGSGNSGSNNIGFGNFGSSN 355 Query 313 IGFGNTGNGNIGFGLTGNNQVGIGGLNSGSGNIGLFNSGTNNVGFFNSGNGNLGIGNSSD 372 GFGNTGN NIGFGLTG+ Q GIGGLNSGSGNIGLFNSG NN+GFFNSG+GNLG GN+ Sbjct 356 FGFGNTGNNNIGFGLTGDGQFGIGGLNSGSGNIGLFNSGDNNIGFFNSGSGNLGFGNA-- 413 Query 373 ANVGIGNSGATVGPFVAGHNTGFGNSGSLNTGMGNAGGVNTGFGNGGAINLGFGNSGQLN 432 GNS NTGFGN+G +NTG N G +NTG G+ GA N GF +SG N Sbjct 414 -----GNS-----------NTGFGNAGDVNTGFWNGGSINTGVGHAGATNFGFFDSGNYN 457 Query 433 AGSFNAG----------SINTGNFNSGQGNTGDFNAGVRNTGWSNSGLTNTGAFNAGSLN 482 AGSFNAG +NTG N+G N+G NAG NTGW+N+G NTG FN G LN Sbjct 458 AGSFNAGNSNTSFGNSGDVNTGFLNAGNINSGFGNAGNVNTGWANAGDINTGGFNGGVLN 517 Query 483 TGFGAVGTGSGPNSGFGNAGTNNSGFFNTGVGSSGFQNGGSNNSGLQNAVGTVIAAGFGN 542 TGF + T +GPNSG+ N GT NSGF G N+ +G GN Sbjct 518 TGFFSATTHAGPNSGYFNVGTGNSGF-------------GHND-----------PSGSGN 553 Query 543 TGAQTVGIANSGVL----------NSGFFNSGVHNSGGFNSENQRSGF 580 +G Q G NSG + NSG ++G N+G +N+ Q +GF Sbjct 554 SGLQNSGFGNSGYVNTSTTSTFGGNSGALDTGYGNAGFYNAAVQNAGF 601 Score = 137 bits (346), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 157/372 (43%), Positives = 193/372 (52%), Gaps = 93/372 (25%) Query 177 NLGIGNIGNANLGGGNTGDLNTGNGNIGNTNLGSGNRGDANLGSGNIG----------NS 226 N G GNIG NLGGGN GD N G+GNIGN NLGSGN G NLGSGNIG N+ Sbjct 255 NFGSGNIGGTNLGGGNQGDFNLGSGNIGNLNLGSGNFGSQNLGSGNIGSINFGVGNIGNT 314 Query 227 NVGGGNVGNGNFGSGN-----GRAGLPGSGNVGNGNLGNSNLGSGNTGNSNVGFGNTGNN 281 N+G GN+G+ NFGSGN +G GS N+G GN G+SN G GNTGN+N+GFG TG+ Sbjct 315 NIGSGNIGDTNFGSGNIGSLNFGSGNSGSNNIGFGNFGSSNFGFGNTGNNNIGFGLTGDG 374 Query 282 NVGTG--NAGSGNIGAGNTGSSNWGFGNNGIGNIGFGNTGNGNIGFGLTGNNQVGI---G 336 G G N+GSGNIG N+G +N GF N+G GN+GFGN GN N GFG G+ G G Sbjct 375 QFGIGGLNSGSGNIGLFNSGDNNIGFFNSGSGNLGFGNAGNSNTGFGNAGDVNTGFWNGG 434 Query 337 GLNSGSG-----NIGLF--------------------NSGTNNVGFFNSGNGNLGIGNSS 371 +N+G G N G F NSG N GF N+GN N G GN+ Sbjct 435 SINTGVGHAGATNFGFFDSGNYNAGSFNAGNSNTSFGNSGDVNTGFLNAGNINSGFGNAG 494 Query 372 DANVGIGNSGAT-----------VGPFVA--------------------GHN-------- 392 + N G N+G G F A GHN Sbjct 495 NVNTGWANAGDINTGGFNGGVLNTGFFSATTHAGPNSGYFNVGTGNSGFGHNDPSGSGNS 554 Query 393 ----TGFGNSGSLNTGM-----GNAGGVNTGFGNGGAINLGFGNSGQLNAGSFNAGSINT 443 +GFGNSG +NT GN+G ++TG+GN G N N+G + AG +G +++ Sbjct 555 GLQNSGFGNSGYVNTSTTSTFGGNSGALDTGYGNAGFYNAAVQNAGFVIAGVNTSGILSS 614 Query 444 GNFNSGQGNTGD 455 G +SG GD Sbjct 615 GTGSSGLLVFGD 626 Score = 120 bits (301), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 139/316 (44%), Positives = 176/316 (56%), Gaps = 43/316 (13%) Query 272 NVGFGNTGNNNVGTGNAGSGNIGAGNTGSSNWGFGNNGIGNIGFGNTGNGNIGFGLTGNN 331 N+GFGN G+ N+G+GN G GN+G+GN G+ N+G GN G N+G GN G+ N+G G GN Sbjct 225 NLGFGNIGSLNLGSGNIGDGNLGSGNIGNINFGSGNIGGTNLGGGNQGDFNLGSGNIGNL 284 Query 332 QVG---IGGLNSGSGNIGLFNSGTNNVGFFNSGNGNLGIGNSSDANVGIGNSGATVGPFV 388 +G G N GSGNIG N G N+G N N+G GN D N G GN G+ Sbjct 285 NLGSGNFGSQNLGSGNIGSINFGVGNIG-----NTNIGSGNIGDTNFGSGNIGSL----- 334 Query 389 AGHNTGFGNSGSLNTGMGNAGGVNTGFGNGGAINLGFG--NSGQLNAGSFNAGSINTGNF 446 N G GNSGS N G GN G N GFGN G N+GFG GQ G N+GS N G F Sbjct 335 ---NFGSGNSGSNNIGFGNFGSSNFGFGNTGNNNIGFGLTGDGQFGIGGLNSGSGNIGLF 391 Query 447 NSGQGNTGDFNAGVRNTGWSNSGLTNTGAFNAGSLNTGFGAVGTGSGPNSGFGNAGTNNS 506 NSG N G FN+G N G+ N+G +NTG NAG +NTGF G N+G G+AG N Sbjct 392 NSGDNNIGFFNSGSGNLGFGNAGNSNTGFGNAGDVNTGFW---NGGSINTGVGHAGATNF 448 Query 507 GFFNTGVGSSGFQNGGSNNSGLQNAVGTVIAAGFGNTGAQTVGIANSGVLNSGFFNSGVH 566 GFF++G ++G N G++N+ NSG +N+GF N+G Sbjct 449 GFFDSGNYNAGSFNAGNSNTSF----------------------GNSGDVNTGFLNAGNI 486 Query 567 NSGGFNSENQRSGFGN 582 NSG N+ N +G+ N Sbjct 487 NSGFGNAGNVNTGWAN 502 Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 96/203 (48%), Positives = 109/203 (54%), Gaps = 9/203 (4%) Query 388 VAGHNTGFGNSGSLNTGMGNAGGVNTGFGNGGAINLGFGNSGQLN-----AGSFNAGSIN 442 + G N GFGN GSLN G GN G N G GN G IN G GN G N G FN GS N Sbjct 221 LQGINLGFGNIGSLNLGSGNIGDGNLGSGNIGNINFGSGNIGGTNLGGGNQGDFNLGSGN 280 Query 443 TGNFNSGQGNTGDFNAGVRNTGWSNSGLTNTGAFNAGSLNTG---FGAVGTGSGPNSGFG 499 GN N G GN G N G N G N G+ N G N GS N G FG+ GS N G G Sbjct 281 IGNLNLGSGNFGSQNLGSGNIGSINFGVGNIGNTNIGSGNIGDTNFGSGNIGS-LNFGSG 339 Query 500 NAGTNNSGFFNTGVGSSGFQNGGSNNSGLQNAVGTVIAAGFGNTGAQTVGIANSGVLNSG 559 N+G+NN GF N G + GF N G+NN G G N+G+ +G+ NSG N G Sbjct 340 NSGSNNIGFGNFGSSNFGFGNTGNNNIGFGLTGDGQFGIGGLNSGSGNIGLFNSGDNNIG 399 Query 560 FFNSGVHNSGGFNSENQRSGFGN 582 FFNSG N G N+ N +GFGN Sbjct 400 FFNSGSGNLGFGNAGNSNTGFGN 422 Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 84/184 (46%), Positives = 97/184 (53%), Gaps = 20/184 (10%) Query 182 NIGNANLGGGNTGDLNTGNGNIGNTNLGSGNRGDANLGSGNIGNSNVGG--GNVGNGNFG 239 N GN+N GN+GD+NTG N GN N G GN G+ N G N G+ N GG G V N F Sbjct 462 NAGNSNTSFGNSGDVNTGFLNAGNINSGFGNAGNVNTGWANAGDINTGGFNGGVLNTGFF 521 Query 240 SGNGRAGLPGSG--NVGNGNLG---NSNLGSGNTGNSNVGFGNTGNNNVGTGNAGSGNIG 294 S AG P SG NVG GN G N GSGN+G N GFGN+G N T + GN G Sbjct 522 SATTHAG-PNSGYFNVGTGNSGFGHNDPSGSGNSGLQNSGFGNSGYVNTSTTSTFGGNSG 580 Query 295 AGNTGSSNWGFGNNGIGNIGFGNTGNGNIGFGLTGNNQVGIGGLNSGSGNIGLFNSGTNN 354 A +TG GN GF N N GF + G N GI L+SG+G+ GL G Sbjct 581 ALDTG----------YGNAGFYNAAVQNAGFVIAGVNTSGI--LSSGTGSSGLLVFGDGL 628 Query 355 VGFF 358 GFF Sbjct 629 SGFF 632 >gi|298526633|ref|ZP_07014042.1| predicted protein [Mycobacterium tuberculosis 94_M4241A] gi|298496427|gb|EFI31721.1| predicted protein [Mycobacterium tuberculosis 94_M4241A] Length=603 Score = 424 bits (1091), Expect = 2e-116, Method: Compositional matrix adjust. Identities = 377/602 (63%), Positives = 433/602 (72%), Gaps = 38/602 (6%) Query 1 MNYAVLPPELNSLRMFTGAGSAPMLAAAVAWDGLAAELGSAASSFGSVTSDLASQAWQGP 60 MNY+VLPPE+NSLRMFTGAGSAPMLAA+VAWDGLAAEL AASSFGSVTS LA Q+WQG Sbjct 14 MNYSVLPPEINSLRMFTGAGSAPMLAASVAWDGLAAELAVAASSFGSVTSGLAGQSWQGA 73 Query 61 AAAAMAAAAAPYAGWLSAAAARAAGAAAQAKAVASAFEAARAATVHPLLVAANRNAFAQL 120 AAAAMAAAAAPYAGWL+AAAARAAGA+AQAKAVASAFEAARAATVHP+LVAANRNAF QL Sbjct 74 AAAAMAAAAAPYAGWLAAAAARAAGASAQAKAVASAFEAARAATVHPMLVAANRNAFVQL 133 Query 121 VMSNWFGLNAPLIAAVEGAYEQMWAADVAAMVGYHSGASAAAEQLVPFQQALQQ------ 174 V+SN FG NAP IAA E YEQMWAADVAAMVGYH GASAAA QL + LQQ Sbjct 134 VLSNLFGQNAPAIAAAEAMYEQMWAADVAAMVGYHGGASAAAAQLSSWSIGLQQALPAAP 193 Query 175 ---LPNLGIGNIGNANLGGGNTGDLNTGNGNIGNTNLGSGNRGDANLGSGNIGNSNVGGG 231 +G+GNIG NLGGGNTGD N G+GN GN N+GSGN G+AN+GSGN G +N+G G Sbjct 194 SALAAAIGLGNIGVGNLGGGNTGDYNLGSGNSGNANVGSGNSGNANVGSGNDGATNLGSG 253 Query 232 NVGNGNFGSGNGRAGLPGSGNVGNGNLGNSNLGSGNTGNSNVGFGNTGNNNVGTGNAGSG 291 N+GN N GSGN G+ N+G+GN G NLG+GN G+ N+G GNTG+ N G GN GS Sbjct 254 NIGNTNLGSGN-----VGNVNLGSGNRGFGNLGNGNFGSGNLGSGNTGSTNFGGGNLGSF 308 Query 292 NIGAGNTGSSNWGFGNNGIGNIGFGNTGNGNIGFGLTGNNQVGIGGLNSGSGNIGLFNSG 351 N+G+GN GSSN GFGNNG N+G GN GN NIGFGLTG+N VGIG LNSG GN+G NSG Sbjct 309 NLGSGNIGSSNIGFGNNGDNNLGLGNNGNNNIGFGLTGDNLVGIGALNSGIGNLGFGNSG 368 Query 352 TNNVGFFNSGNGNLGIGNSSDANVGIGNSGATVGPFVAGHNTGFGNSGSLNTGMGNAGGV 411 NN+GFFNSGN N+G NS + N G GN+G NTGFGN+G NTG GNAG Sbjct 369 NNNIGFFNSGNNNVGFFNSGNNNFGFGNAGDI--------NTGFGNAGDTNTGFGNAGFF 420 Query 412 NTGFGNGGAINLGFGNSGQLNAGSFNAGSINTGNFNSGQGNTGDFNAGVRNTGWSNSGLT 471 N G GN G ++G GN G N G NAG+ + G N+G N G NAG NTG++NSG Sbjct 421 NMGIGNAGNEDMGVGNGGSFNVGVGNAGNQSVGFGNAGTLNVGFANAGSINTGFANSGSI 480 Query 472 NTGAFNAGSLNTGFGAVGTGSGPNSGFGNAGTNNSGFFNTGVGSSGFQNGGSNNSGLQNA 531 NTG F++G NTGFG+ S +SGFGN G N+SGFFNTG S+G+ N G SG+ N Sbjct 481 NTGGFDSGDRNTGFGSSVDQSVSSSGFGNTGMNSSGFFNTGNVSAGYGNNGDVQSGINNT 540 Query 532 -------------VGTVIAAGFGNTGAQTVGIANSGVLNSGFFNSGVHNSGGFNSENQRS 578 GTV G N+G QT GIANSG LN+G N+G H+SGGFN + +S Sbjct 541 NSGGFNVGFYNSGAGTV---GIANSGLQTTGIANSGTLNTGVANTGDHSSGGFNQGSDQS 597 Query 579 GF 580 GF Sbjct 598 GF 599 Score = 120 bits (302), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 157/362 (44%), Positives = 201/362 (56%), Gaps = 66/362 (18%) Query 249 GSGNVGNGNLGNSNLGSGNTGNSNVGFGNTGNNNVGTGNAGSGNIGAGNTGSSNWGFGNN 308 G GN+G GN G+ NLGSGN+GN+NVG GN+GN NVG+GN G+ N+G+GN G++N G GN Sbjct 206 GVGNLGGGNTGDYNLGSGNSGNANVGSGNSGNANVGSGNDGATNLGSGNIGNTNLGSGN- 264 Query 309 GIGNIGFGNTGNGNIGFGLTGNNQVGIGGLNSGSGNIGLFNSGTNNVGFFNSGNGNLGIG 368 +GN+ N G+GN GFG GN G G L GSGN G N G N+G FN G+GN+G Sbjct 265 -VGNV---NLGSGNRGFGNLGNGNFGSGNL--GSGNTGSTNFGGGNLGSFNLGSGNIGSS 318 Query 369 N-------------------------SSDANVGIGNSGATVGPFVAGHNTGFGNSGSLNT 403 N + D VGIG + +G N GFGNSG+ N Sbjct 319 NIGFGNNGDNNLGLGNNGNNNIGFGLTGDNLVGIGALNSGIG------NLGFGNSGNNNI 372 Query 404 GMGNAGGVNTGFGNGGAINLGFGNSGQLNAGSFNAGSINTGNFNSGQGNTGDFNAGVRNT 463 G N+G N GF N G N GFGN+G +N G NAG NTG GN G FN G+ N Sbjct 373 GFFNSGNNNVGFFNSGNNNFGFGNAGDINTGFGNAGDTNTG-----FGNAGFFNMGIGNA 427 Query 464 GWSNSGLTNTGAFNAGSLNTGFGAVGTGSGPNSGFGNAGTNNSGFFNTGVGSSGFQNGGS 523 G + G+ N G+FN G N G +VG FGNAGT N GF N G ++GF N GS Sbjct 428 GNEDMGVGNGGSFNVGVGNAGNQSVG--------FGNAGTLNVGFANAGSINTGFANSGS 479 Query 524 NNSGLQNAVGTVIAAGFGNTGAQTVGI---ANSGVLNSGFFNSGVHNSGGFNSENQRSGF 580 N+G GF ++G + G + V +SGF N+G+++SG FN+ N +G+ Sbjct 480 INTG-----------GF-DSGDRNTGFGSSVDQSVSSSGFGNTGMNSSGFFNTGNVSAGY 527 Query 581 GN 582 GN Sbjct 528 GN 529 Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 107/304 (36%), Positives = 135/304 (45%), Gaps = 95/304 (31%) Query 365 LGIGNSSDANVGIGNSGATVGPFVAGHNTGFGNSGSLNTGMGNAGGVNTGFGNGGAINLG 424 +G+GN N+G GN+G +N G GNSG+ N G GN+G N G GN GA NLG Sbjct 200 IGLGNIGVGNLGGGNTGD--------YNLGSGNSGNANVGSGNSGNANVGSGNDGATNLG 251 Query 425 FGNSGQLNAGSFNAGSINTGNFNSGQGNTGDFNAGVRNTGWSNSGLTNTGAFNAGSLNTG 484 GN G N GS N G++N G+ N G GN G+ N G N G N+G TN G N GS N G Sbjct 252 SGNIGNTNLGSGNVGNVNLGSGNRGFGNLGNGNFGSGNLGSGNTGSTNFGGGNLGSFNLG 311 Query 485 FGAVGTGSGP---------------------------------------NSGFGNAGTNN 505 G +G+ + N GFGN+G NN Sbjct 312 SGNIGSSNIGFGNNGDNNLGLGNNGNNNIGFGLTGDNLVGIGALNSGIGNLGFGNSGNNN 371 Query 506 SGFFNTGVGSSGFQNGGSNNSGLQNA---------------------------------- 531 GFFN+G + GF N G+NN G NA Sbjct 372 IGFFNSGNNNVGFFNSGNNNFGFGNAGDINTGFGNAGDTNTGFGNAGFFNMGIGNAGNED 431 Query 532 ------------VGTV--IAAGFGNTGAQTVGIANSGVLNSGFFNSGVHNSGGFNSENQR 577 VG + GFGN G VG AN+G +N+GF NSG N+GGF+S ++ Sbjct 432 MGVGNGGSFNVGVGNAGNQSVGFGNAGTLNVGFANAGSINTGFANSGSINTGGFDSGDRN 491 Query 578 SGFG 581 +GFG Sbjct 492 TGFG 495 >gi|15842735|ref|NP_337772.1| PPE family protein [Mycobacterium tuberculosis CDC1551] gi|254365784|ref|ZP_04981829.1| PPE family protein [Mycobacterium tuberculosis str. Haarlem] gi|13883057|gb|AAK47586.1| PPE family protein [Mycobacterium tuberculosis CDC1551] gi|134151297|gb|EBA43342.1| PPE family protein [Mycobacterium tuberculosis str. Haarlem] Length=603 Score = 424 bits (1090), Expect = 2e-116, Method: Compositional matrix adjust. Identities = 377/602 (63%), Positives = 433/602 (72%), Gaps = 38/602 (6%) Query 1 MNYAVLPPELNSLRMFTGAGSAPMLAAAVAWDGLAAELGSAASSFGSVTSDLASQAWQGP 60 MNY+VLPPE+NSLRMFTGAGSAPMLAA+VAWDGLAAEL AASSFGSVTS LA Q+WQG Sbjct 14 MNYSVLPPEINSLRMFTGAGSAPMLAASVAWDGLAAELAVAASSFGSVTSGLAGQSWQGA 73 Query 61 AAAAMAAAAAPYAGWLSAAAARAAGAAAQAKAVASAFEAARAATVHPLLVAANRNAFAQL 120 AAAAMAAAAAPYAGWL+AAAARAAGA+AQAKAVASAFEAARAATVHP+LVAANRNAF QL Sbjct 74 AAAAMAAAAAPYAGWLAAAAARAAGASAQAKAVASAFEAARAATVHPMLVAANRNAFVQL 133 Query 121 VMSNWFGLNAPLIAAVEGAYEQMWAADVAAMVGYHSGASAAAEQLVPFQQALQQ------ 174 V+SN FG NAP IAA E YEQMWAADVAAMVGYH GASAAA QL + LQQ Sbjct 134 VLSNLFGQNAPAIAAAEAMYEQMWAADVAAMVGYHGGASAAAAQLSSWSIGLQQALPAAP 193 Query 175 ---LPNLGIGNIGNANLGGGNTGDLNTGNGNIGNTNLGSGNRGDANLGSGNIGNSNVGGG 231 +G+GNIG NLGGGNTGD N G+GN GN N+GSGN G+AN+GSGN G +N+G G Sbjct 194 SALAAAIGLGNIGVGNLGGGNTGDYNLGSGNSGNANVGSGNSGNANVGSGNDGATNLGSG 253 Query 232 NVGNGNFGSGNGRAGLPGSGNVGNGNLGNSNLGSGNTGNSNVGFGNTGNNNVGTGNAGSG 291 N+GN N GSGN G+ N+G+GN G NLG+GN G+ N+G GNTG+ N G GN GS Sbjct 254 NIGNTNLGSGN-----VGNVNLGSGNRGFGNLGNGNFGSGNLGSGNTGSTNFGGGNLGSF 308 Query 292 NIGAGNTGSSNWGFGNNGIGNIGFGNTGNGNIGFGLTGNNQVGIGGLNSGSGNIGLFNSG 351 N+G+GN GSSN GFGNNG N+G GN GN NIGFGLTG+N VGIG LNSG GN+G NSG Sbjct 309 NLGSGNIGSSNIGFGNNGDNNLGLGNNGNNNIGFGLTGDNLVGIGALNSGIGNLGFGNSG 368 Query 352 TNNVGFFNSGNGNLGIGNSSDANVGIGNSGATVGPFVAGHNTGFGNSGSLNTGMGNAGGV 411 NN+GFFNSGN N+G NS + N G GN+G NTGFGN+G NTG GNAG Sbjct 369 NNNIGFFNSGNNNVGFFNSGNNNFGFGNAGDI--------NTGFGNAGDTNTGFGNAGFF 420 Query 412 NTGFGNGGAINLGFGNSGQLNAGSFNAGSINTGNFNSGQGNTGDFNAGVRNTGWSNSGLT 471 N G GN G ++G GN G N G NAG+ + G N+G N G NAG NTG++NSG Sbjct 421 NMGIGNAGNEDMGVGNGGSFNVGVGNAGNQSVGFGNAGTLNVGFANAGSINTGFANSGSI 480 Query 472 NTGAFNAGSLNTGFGAVGTGSGPNSGFGNAGTNNSGFFNTGVGSSGFQNGGSNNSGLQNA 531 NTG F++G NTGFG+ S +SGFGN G N+SGFFNTG S+G+ N G SG+ N Sbjct 481 NTGGFDSGDRNTGFGSSVDQSVSSSGFGNTGMNSSGFFNTGNVSAGYGNNGDVQSGINNT 540 Query 532 -------------VGTVIAAGFGNTGAQTVGIANSGVLNSGFFNSGVHNSGGFNSENQRS 578 GTV G N+G QT GIANSG LN+G N+G H+SGGFN + +S Sbjct 541 NSGGFNVGFYNSGAGTV---GIANSGLQTTGIANSGTLNTGVANTGDHSSGGFNQGSDQS 597 Query 579 GF 580 GF Sbjct 598 GF 599 Lambda K H 0.309 0.131 0.387 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 1316059707486 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40