BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv3541c
Length=129
Score E
Sequences producing significant alignments: (Bits) Value
gi|15610677|ref|NP_218058.1| hypothetical protein Rv3541c [Mycob... 259 6e-68
gi|306778423|ref|ZP_07416760.1| hypothetical protein TMBG_02076 ... 258 2e-67
gi|339296360|gb|AEJ48471.1| hypothetical protein CCDC5079_3282 [... 248 2e-64
gi|240172831|ref|ZP_04751490.1| hypothetical protein MkanA1_2619... 230 5e-59
gi|41406624|ref|NP_959460.1| hypothetical protein MAP0526 [Mycob... 229 7e-59
gi|296166570|ref|ZP_06849000.1| MaoC family dehydratase [Mycobac... 228 2e-58
gi|118619287|ref|YP_907619.1| hypothetical protein MUL_4102 [Myc... 221 2e-56
gi|183984996|ref|YP_001853287.1| hypothetical protein MMAR_5028 ... 219 1e-55
gi|254822623|ref|ZP_05227624.1| hypothetical protein MintA_22019... 216 7e-55
gi|120406202|ref|YP_956031.1| MaoC-like dehydratase [Mycobacteri... 214 3e-54
gi|342862367|ref|ZP_08719007.1| hypothetical protein MCOL_25868 ... 212 1e-53
gi|126437622|ref|YP_001073313.1| MaoC-like dehydratase [Mycobact... 211 4e-53
gi|118471314|ref|YP_890217.1| MaoC like domain-containing protei... 209 9e-53
gi|108801636|ref|YP_641833.1| MaoC-like dehydratase [Mycobacteri... 209 1e-52
gi|333992328|ref|YP_004524942.1| hypothetical protein JDM601_368... 209 2e-52
gi|315442544|ref|YP_004075423.1| MaoC-like protein [Mycobacteriu... 208 2e-52
gi|145222104|ref|YP_001132782.1| dehydratase [Mycobacterium gilv... 207 4e-52
gi|312138121|ref|YP_004005457.1| dehydrogenase [Rhodococcus equi... 197 6e-49
gi|325674974|ref|ZP_08154661.1| MaoC family dehydratase [Rhodoco... 196 9e-49
gi|111021459|ref|YP_704431.1| hypothetical protein RHA1_ro04487 ... 191 4e-47
gi|226363825|ref|YP_002781607.1| hypothetical protein ROP_44150 ... 190 7e-47
gi|226304200|ref|YP_002764158.1| hypothetical protein RER_07110 ... 189 1e-46
gi|54022416|ref|YP_116658.1| hypothetical protein nfa4520 [Nocar... 184 3e-45
gi|343925846|ref|ZP_08765361.1| hypothetical protein GOALK_050_0... 181 2e-44
gi|262200884|ref|YP_003272092.1| hypothetical protein Gbro_0886 ... 179 8e-44
gi|169627720|ref|YP_001701369.1| hypothetical protein MAB_0617 [... 176 7e-43
gi|319948636|ref|ZP_08022760.1| dehydrogenase [Dietzia cinnamea ... 172 1e-41
gi|326384605|ref|ZP_08206284.1| hypothetical protein SCNU_16773 ... 168 2e-40
gi|302525653|ref|ZP_07277995.1| dehydratase [Streptomyces sp. AA... 167 6e-40
gi|333918580|ref|YP_004492161.1| dehydratase [Amycolicicoccus su... 163 6e-39
gi|296141528|ref|YP_003648771.1| hypothetical protein Tpau_3857 ... 163 9e-39
gi|145595147|ref|YP_001159444.1| hypothetical protein Strop_2622... 162 2e-38
gi|300784418|ref|YP_003764709.1| hypothetical protein AMED_2512 ... 160 6e-38
gi|159038393|ref|YP_001537646.1| hypothetical protein Sare_2820 ... 159 1e-37
gi|326331717|ref|ZP_08198005.1| putative MaoC like domain protei... 153 6e-36
gi|271969392|ref|YP_003343588.1| dehydratase [Streptosporangium ... 150 7e-35
gi|119717011|ref|YP_923976.1| dehydratase [Nocardioides sp. JS61... 149 2e-34
gi|229489039|ref|ZP_04382905.1| putative MaoC like domain protei... 142 1e-32
gi|226308561|ref|YP_002768521.1| beta-hydroxyacyl-[acyl-carrier-... 142 1e-32
gi|325673084|ref|ZP_08152778.1| MaoC domain protein dehydratase ... 142 2e-32
gi|312141659|ref|YP_004008995.1| dehydrogenase [Rhodococcus equi... 142 2e-32
gi|311744300|ref|ZP_07718104.1| conserved hypothetical protein [... 142 2e-32
gi|226365299|ref|YP_002783082.1| hypothetical protein ROP_58900 ... 138 3e-31
gi|111022791|ref|YP_705763.1| hypothetical protein RHA1_ro05828 ... 135 2e-30
gi|269127686|ref|YP_003301056.1| MaoC domain-containing protein ... 134 4e-30
gi|329895413|ref|ZP_08270994.1| hypothetical protein IMCC3088_14... 131 3e-29
gi|256389294|ref|YP_003110858.1| MaoC domain-containing protein ... 131 4e-29
gi|326384855|ref|ZP_08206530.1| hypothetical protein SCNU_18017 ... 126 1e-27
gi|226303886|ref|YP_002763844.1| hypothetical protein RER_03970 ... 125 2e-27
gi|302535672|ref|ZP_07288014.1| MaoC domain-containing protein d... 125 2e-27
>gi|15610677|ref|NP_218058.1| hypothetical protein Rv3541c [Mycobacterium tuberculosis H37Rv]
gi|15843153|ref|NP_338190.1| hypothetical protein MT3645 [Mycobacterium tuberculosis CDC1551]
gi|31794717|ref|NP_857210.1| hypothetical protein Mb3571c [Mycobacterium bovis AF2122/97]
70 more sequence titles
Length=129
Score = 259 bits (663), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 129/129 (100%), Positives = 129/129 (100%), Gaps = 0/129 (0%)
Query 1 MTVVGAVLPELKLYGDPTFIVSTALATRDFQDVHHDRDKAVAQGSKDIFVNILTDTGLVQ 60
MTVVGAVLPELKLYGDPTFIVSTALATRDFQDVHHDRDKAVAQGSKDIFVNILTDTGLVQ
Sbjct 1 MTVVGAVLPELKLYGDPTFIVSTALATRDFQDVHHDRDKAVAQGSKDIFVNILTDTGLVQ 60
Query 61 RYVTDWAGPSALIKSIGLRLGVPWYAYDTVTFSGEVTAVNDGLITVKVVGRNTLGDHVTA 120
RYVTDWAGPSALIKSIGLRLGVPWYAYDTVTFSGEVTAVNDGLITVKVVGRNTLGDHVTA
Sbjct 61 RYVTDWAGPSALIKSIGLRLGVPWYAYDTVTFSGEVTAVNDGLITVKVVGRNTLGDHVTA 120
Query 121 TVELSMRDS 129
TVELSMRDS
Sbjct 121 TVELSMRDS 129
>gi|306778423|ref|ZP_07416760.1| hypothetical protein TMBG_02076 [Mycobacterium tuberculosis SUMu002]
gi|306790811|ref|ZP_07429133.1| hypothetical protein TMDG_01272 [Mycobacterium tuberculosis SUMu004]
gi|306791135|ref|ZP_07429437.1| hypothetical protein TMEG_00030 [Mycobacterium tuberculosis SUMu005]
gi|308328522|gb|EFP17373.1| hypothetical protein TMBG_02076 [Mycobacterium tuberculosis SUMu002]
gi|308332758|gb|EFP21609.1| hypothetical protein TMDG_01272 [Mycobacterium tuberculosis SUMu004]
gi|308340250|gb|EFP29101.1| hypothetical protein TMEG_00030 [Mycobacterium tuberculosis SUMu005]
Length=129
Score = 258 bits (659), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 128/129 (99%), Positives = 128/129 (99%), Gaps = 0/129 (0%)
Query 1 MTVVGAVLPELKLYGDPTFIVSTALATRDFQDVHHDRDKAVAQGSKDIFVNILTDTGLVQ 60
MTVVGAVLPELKLYGDPTFIVSTAL TRDFQDVHHDRDKAVAQGSKDIFVNILTDTGLVQ
Sbjct 1 MTVVGAVLPELKLYGDPTFIVSTALVTRDFQDVHHDRDKAVAQGSKDIFVNILTDTGLVQ 60
Query 61 RYVTDWAGPSALIKSIGLRLGVPWYAYDTVTFSGEVTAVNDGLITVKVVGRNTLGDHVTA 120
RYVTDWAGPSALIKSIGLRLGVPWYAYDTVTFSGEVTAVNDGLITVKVVGRNTLGDHVTA
Sbjct 61 RYVTDWAGPSALIKSIGLRLGVPWYAYDTVTFSGEVTAVNDGLITVKVVGRNTLGDHVTA 120
Query 121 TVELSMRDS 129
TVELSMRDS
Sbjct 121 TVELSMRDS 129
>gi|339296360|gb|AEJ48471.1| hypothetical protein CCDC5079_3282 [Mycobacterium tuberculosis
CCDC5079]
gi|339299961|gb|AEJ52071.1| hypothetical protein CCDC5180_3234 [Mycobacterium tuberculosis
CCDC5180]
Length=123
Score = 248 bits (633), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 122/123 (99%), Positives = 123/123 (100%), Gaps = 0/123 (0%)
Query 7 VLPELKLYGDPTFIVSTALATRDFQDVHHDRDKAVAQGSKDIFVNILTDTGLVQRYVTDW 66
+LPELKLYGDPTFIVSTALATRDFQDVHHDRDKAVAQGSKDIFVNILTDTGLVQRYVTDW
Sbjct 1 MLPELKLYGDPTFIVSTALATRDFQDVHHDRDKAVAQGSKDIFVNILTDTGLVQRYVTDW 60
Query 67 AGPSALIKSIGLRLGVPWYAYDTVTFSGEVTAVNDGLITVKVVGRNTLGDHVTATVELSM 126
AGPSALIKSIGLRLGVPWYAYDTVTFSGEVTAVNDGLITVKVVGRNTLGDHVTATVELSM
Sbjct 61 AGPSALIKSIGLRLGVPWYAYDTVTFSGEVTAVNDGLITVKVVGRNTLGDHVTATVELSM 120
Query 127 RDS 129
RDS
Sbjct 121 RDS 123
>gi|240172831|ref|ZP_04751490.1| hypothetical protein MkanA1_26197 [Mycobacterium kansasii ATCC
12478]
Length=133
Score = 230 bits (586), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 111/126 (89%), Positives = 121/126 (97%), Gaps = 0/126 (0%)
Query 4 VGAVLPELKLYGDPTFIVSTALATRDFQDVHHDRDKAVAQGSKDIFVNILTDTGLVQRYV 63
VG LPELKLYGDPTFI+STALATRDFQDVHHDRDKA A+GSKDIFVNILTDTGLVQRYV
Sbjct 8 VGTQLPELKLYGDPTFIISTALATRDFQDVHHDRDKAQAKGSKDIFVNILTDTGLVQRYV 67
Query 64 TDWAGPSALIKSIGLRLGVPWYAYDTVTFSGEVTAVNDGLITVKVVGRNTLGDHVTATVE 123
TDWAGPSALIKSIGLRLGVPWYAYDTVTF+GEVTAV+DG+ITVKV+GRN+LGDHV ATV+
Sbjct 68 TDWAGPSALIKSIGLRLGVPWYAYDTVTFAGEVTAVDDGVITVKVLGRNSLGDHVIATVK 127
Query 124 LSMRDS 129
L+M D+
Sbjct 128 LTMGDA 133
>gi|41406624|ref|NP_959460.1| hypothetical protein MAP0526 [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|118465247|ref|YP_879900.1| hypothetical protein MAV_0620 [Mycobacterium avium 104]
gi|254773577|ref|ZP_05215093.1| hypothetical protein MaviaA2_02720 [Mycobacterium avium subsp.
avium ATCC 25291]
gi|41394973|gb|AAS02843.1| hypothetical protein MAP_0526 [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|118166534|gb|ABK67431.1| conserved hypothetical protein [Mycobacterium avium 104]
gi|336458414|gb|EGO37388.1| hypothetical protein MAPs_13090 [Mycobacterium avium subsp. paratuberculosis
S397]
Length=133
Score = 229 bits (585), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 111/126 (89%), Positives = 118/126 (94%), Gaps = 0/126 (0%)
Query 4 VGAVLPELKLYGDPTFIVSTALATRDFQDVHHDRDKAVAQGSKDIFVNILTDTGLVQRYV 63
VG LPELKLYGDPTFI+STALATRDFQDVHHDRDKA A+GSKDIFVNILTDTGLVQRYV
Sbjct 8 VGTTLPELKLYGDPTFIISTALATRDFQDVHHDRDKAQAKGSKDIFVNILTDTGLVQRYV 67
Query 64 TDWAGPSALIKSIGLRLGVPWYAYDTVTFSGEVTAVNDGLITVKVVGRNTLGDHVTATVE 123
TDWAGPSALIKSIGLRLGVPWYAYDTVTFSGEVTAV DGL+T+KV GRN+LGDHV ATV
Sbjct 68 TDWAGPSALIKSIGLRLGVPWYAYDTVTFSGEVTAVQDGLVTLKVFGRNSLGDHVIATVT 127
Query 124 LSMRDS 129
L+M D+
Sbjct 128 LTMGDA 133
>gi|296166570|ref|ZP_06849000.1| MaoC family dehydratase [Mycobacterium parascrofulaceum ATCC
BAA-614]
gi|295898056|gb|EFG77632.1| MaoC family dehydratase [Mycobacterium parascrofulaceum ATCC
BAA-614]
Length=133
Score = 228 bits (582), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 112/126 (89%), Positives = 119/126 (95%), Gaps = 0/126 (0%)
Query 4 VGAVLPELKLYGDPTFIVSTALATRDFQDVHHDRDKAVAQGSKDIFVNILTDTGLVQRYV 63
VG VLPELKL+GDPTFI+STALATRDFQDVHHDRD A A+GSKDIFVNILTDTGLVQRYV
Sbjct 8 VGTVLPELKLHGDPTFIISTALATRDFQDVHHDRDLAQAKGSKDIFVNILTDTGLVQRYV 67
Query 64 TDWAGPSALIKSIGLRLGVPWYAYDTVTFSGEVTAVNDGLITVKVVGRNTLGDHVTATVE 123
TDWAGPSALIKSIGLRLGVPWYAYDTVTFSGEVTAV+DGL+TVKV GRN+LGDHV ATV
Sbjct 68 TDWAGPSALIKSIGLRLGVPWYAYDTVTFSGEVTAVDDGLVTVKVFGRNSLGDHVIATVT 127
Query 124 LSMRDS 129
L+M DS
Sbjct 128 LTMGDS 133
>gi|118619287|ref|YP_907619.1| hypothetical protein MUL_4102 [Mycobacterium ulcerans Agy99]
gi|118571397|gb|ABL06148.1| conserved hypothetical protein [Mycobacterium ulcerans Agy99]
Length=128
Score = 221 bits (564), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 108/123 (88%), Positives = 116/123 (95%), Gaps = 0/123 (0%)
Query 4 VGAVLPELKLYGDPTFIVSTALATRDFQDVHHDRDKAVAQGSKDIFVNILTDTGLVQRYV 63
VG LPELKL+GDPTFIVSTALATRDFQDVHHDRDKA A+GSKDIFVNILTDTGLVQRYV
Sbjct 3 VGTKLPELKLHGDPTFIVSTALATRDFQDVHHDRDKAQAKGSKDIFVNILTDTGLVQRYV 62
Query 64 TDWAGPSALIKSIGLRLGVPWYAYDTVTFSGEVTAVNDGLITVKVVGRNTLGDHVTATVE 123
TDWAGPSALIKSIGLRLG+PWYAYDTVTFSGEVTA+ DGLITVKVVG N+LG+HV ATV
Sbjct 63 TDWAGPSALIKSIGLRLGLPWYAYDTVTFSGEVTAIEDGLITVKVVGSNSLGNHVIATVT 122
Query 124 LSM 126
L++
Sbjct 123 LTV 125
>gi|183984996|ref|YP_001853287.1| hypothetical protein MMAR_5028 [Mycobacterium marinum M]
gi|183178322|gb|ACC43432.1| conserved hypothetical protein [Mycobacterium marinum M]
Length=133
Score = 219 bits (557), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 107/123 (87%), Positives = 114/123 (93%), Gaps = 0/123 (0%)
Query 4 VGAVLPELKLYGDPTFIVSTALATRDFQDVHHDRDKAVAQGSKDIFVNILTDTGLVQRYV 63
VG LPELKL+GDPTFIVSTALATRDFQDVHHDRDKA A+GSKDIFVNILTDTGLVQRYV
Sbjct 8 VGTKLPELKLHGDPTFIVSTALATRDFQDVHHDRDKAQAKGSKDIFVNILTDTGLVQRYV 67
Query 64 TDWAGPSALIKSIGLRLGVPWYAYDTVTFSGEVTAVNDGLITVKVVGRNTLGDHVTATVE 123
TDWAGPSALIKSIGLRLGVPWYAYDTV FSGEVT + DGLITVKVVG N+LG+HV ATV
Sbjct 68 TDWAGPSALIKSIGLRLGVPWYAYDTVIFSGEVTTIEDGLITVKVVGSNSLGNHVIATVT 127
Query 124 LSM 126
L++
Sbjct 128 LTV 130
>gi|254822623|ref|ZP_05227624.1| hypothetical protein MintA_22019 [Mycobacterium intracellulare
ATCC 13950]
Length=133
Score = 216 bits (551), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 105/123 (86%), Positives = 114/123 (93%), Gaps = 0/123 (0%)
Query 4 VGAVLPELKLYGDPTFIVSTALATRDFQDVHHDRDKAVAQGSKDIFVNILTDTGLVQRYV 63
VG LPELKL+G PTFI+STALATRDFQDVHHDRD A A+GSKDIFVNILTDTGLVQRYV
Sbjct 8 VGTTLPELKLHGTPTFIISTALATRDFQDVHHDRDLAQAKGSKDIFVNILTDTGLVQRYV 67
Query 64 TDWAGPSALIKSIGLRLGVPWYAYDTVTFSGEVTAVNDGLITVKVVGRNTLGDHVTATVE 123
TDWAGP+ALIKSIGLRLGVPWYAYDTVTFSGEVTAV+DGLIT+KV GRN+LGDHV A V
Sbjct 68 TDWAGPTALIKSIGLRLGVPWYAYDTVTFSGEVTAVDDGLITLKVFGRNSLGDHVIANVT 127
Query 124 LSM 126
L++
Sbjct 128 LTI 130
>gi|120406202|ref|YP_956031.1| MaoC-like dehydratase [Mycobacterium vanbaalenii PYR-1]
gi|119959020|gb|ABM16025.1| MaoC-like dehydratase [Mycobacterium vanbaalenii PYR-1]
Length=133
Score = 214 bits (545), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 102/125 (82%), Positives = 115/125 (92%), Gaps = 0/125 (0%)
Query 4 VGAVLPELKLYGDPTFIVSTALATRDFQDVHHDRDKAVAQGSKDIFVNILTDTGLVQRYV 63
VG LPELK+YGDPTFIVSTA+ATRD+QDVHHDRDKA A+GSKDIFVNILTDTGLVQRY+
Sbjct 8 VGTKLPELKIYGDPTFIVSTAIATRDYQDVHHDRDKAQAKGSKDIFVNILTDTGLVQRYL 67
Query 64 TDWAGPSALIKSIGLRLGVPWYAYDTVTFSGEVTAVNDGLITVKVVGRNTLGDHVTATVE 123
TDWAGP+A IKSIGLRLGVPWYAYDT+TF+GEVTAV+DG+ TVKV+G N+LGDHV AT
Sbjct 68 TDWAGPTARIKSIGLRLGVPWYAYDTITFTGEVTAVDDGVATVKVLGSNSLGDHVIATAT 127
Query 124 LSMRD 128
LS+ D
Sbjct 128 LSLGD 132
>gi|342862367|ref|ZP_08719007.1| hypothetical protein MCOL_25868 [Mycobacterium colombiense CECT
3035]
gi|342130038|gb|EGT83372.1| hypothetical protein MCOL_25868 [Mycobacterium colombiense CECT
3035]
Length=133
Score = 212 bits (540), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 104/126 (83%), Positives = 113/126 (90%), Gaps = 0/126 (0%)
Query 4 VGAVLPELKLYGDPTFIVSTALATRDFQDVHHDRDKAVAQGSKDIFVNILTDTGLVQRYV 63
VG LPELKL+G PTFI+STALATRDFQDVHHDRD A A+GSKDIFVNILTDTGLVQRYV
Sbjct 8 VGTTLPELKLHGTPTFIISTALATRDFQDVHHDRDLAQAKGSKDIFVNILTDTGLVQRYV 67
Query 64 TDWAGPSALIKSIGLRLGVPWYAYDTVTFSGEVTAVNDGLITVKVVGRNTLGDHVTATVE 123
TDWAGP+A IKSIGLRLGVPWYAYDTVTFSGEVT V+DGLIT+KV GRN+LGDHV A V
Sbjct 68 TDWAGPTARIKSIGLRLGVPWYAYDTVTFSGEVTGVDDGLITLKVFGRNSLGDHVIANVT 127
Query 124 LSMRDS 129
L++ S
Sbjct 128 LTIGGS 133
>gi|126437622|ref|YP_001073313.1| MaoC-like dehydratase [Mycobacterium sp. JLS]
gi|126237422|gb|ABO00823.1| MaoC-like dehydratase [Mycobacterium sp. JLS]
Length=143
Score = 211 bits (536), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 101/125 (81%), Positives = 114/125 (92%), Gaps = 0/125 (0%)
Query 4 VGAVLPELKLYGDPTFIVSTALATRDFQDVHHDRDKAVAQGSKDIFVNILTDTGLVQRYV 63
VG LPEL++YGDPTFIVSTA+ATRD+QDVHHDRDKA A+GSKDIFVNILTDTGLVQRY+
Sbjct 18 VGHKLPELQIYGDPTFIVSTAIATRDYQDVHHDRDKAQAKGSKDIFVNILTDTGLVQRYL 77
Query 64 TDWAGPSALIKSIGLRLGVPWYAYDTVTFSGEVTAVNDGLITVKVVGRNTLGDHVTATVE 123
TDWAGPSA IKSIGLRLGVPWYAYDT+TF+GEVTAV+DG+ TVKVVG N+LG+HV AT
Sbjct 78 TDWAGPSARIKSIGLRLGVPWYAYDTITFTGEVTAVDDGVTTVKVVGANSLGNHVIATAT 137
Query 124 LSMRD 128
L + D
Sbjct 138 LVLGD 142
>gi|118471314|ref|YP_890217.1| MaoC like domain-containing protein [Mycobacterium smegmatis
str. MC2 155]
gi|118172601|gb|ABK73497.1| MaoC like domain, putative [Mycobacterium smegmatis str. MC2
155]
Length=137
Score = 209 bits (533), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 102/131 (78%), Positives = 114/131 (88%), Gaps = 2/131 (1%)
Query 1 MTV--VGAVLPELKLYGDPTFIVSTALATRDFQDVHHDRDKAVAQGSKDIFVNILTDTGL 58
MTV VG LPEL +YGDPTFIVSTA+ATRD+QDVHHDRDKA A+GSKDIFVNILTDTGL
Sbjct 6 MTVIEVGTALPELAIYGDPTFIVSTAIATRDYQDVHHDRDKAQAKGSKDIFVNILTDTGL 65
Query 59 VQRYVTDWAGPSALIKSIGLRLGVPWYAYDTVTFSGEVTAVNDGLITVKVVGRNTLGDHV 118
VQRY+TDWAGP+A IKSIGLRLGVPWYAYDTVTF GEVTA+ D L+TVKV G N+LG+HV
Sbjct 66 VQRYLTDWAGPNARIKSIGLRLGVPWYAYDTVTFRGEVTAIEDDLVTVKVTGSNSLGNHV 125
Query 119 TATVELSMRDS 129
AT L++ D
Sbjct 126 IATATLNLGDK 136
>gi|108801636|ref|YP_641833.1| MaoC-like dehydratase [Mycobacterium sp. MCS]
gi|119870787|ref|YP_940739.1| dehydratase [Mycobacterium sp. KMS]
gi|108772055|gb|ABG10777.1| MaoC-like dehydratase [Mycobacterium sp. MCS]
gi|119696876|gb|ABL93949.1| MaoC domain protein dehydratase [Mycobacterium sp. KMS]
Length=133
Score = 209 bits (531), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 99/125 (80%), Positives = 114/125 (92%), Gaps = 0/125 (0%)
Query 4 VGAVLPELKLYGDPTFIVSTALATRDFQDVHHDRDKAVAQGSKDIFVNILTDTGLVQRYV 63
VG LPEL++YGDPTFIVSTA+ATRD+QDVHHDRDKA A+GSKDIFVNILTDTGLVQRY+
Sbjct 8 VGTKLPELQIYGDPTFIVSTAIATRDYQDVHHDRDKAQAKGSKDIFVNILTDTGLVQRYL 67
Query 64 TDWAGPSALIKSIGLRLGVPWYAYDTVTFSGEVTAVNDGLITVKVVGRNTLGDHVTATVE 123
TDWAGPSA I+SIGLRLGVPWYAYDT+TF+GEVTAV+DG+ TVKVVG N+LG+HV AT
Sbjct 68 TDWAGPSARIRSIGLRLGVPWYAYDTITFTGEVTAVDDGVTTVKVVGANSLGNHVIATAT 127
Query 124 LSMRD 128
+ + D
Sbjct 128 IVLGD 132
>gi|333992328|ref|YP_004524942.1| hypothetical protein JDM601_3688 [Mycobacterium sp. JDM601]
gi|333488296|gb|AEF37688.1| conserved hypothetical protein [Mycobacterium sp. JDM601]
Length=133
Score = 209 bits (531), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 100/123 (82%), Positives = 112/123 (92%), Gaps = 0/123 (0%)
Query 4 VGAVLPELKLYGDPTFIVSTALATRDFQDVHHDRDKAVAQGSKDIFVNILTDTGLVQRYV 63
VG LPELK+YGDPTFIVSTA+ATRD+QDVHHDRDKA A+GSKDIFVNILTDTGLVQRY+
Sbjct 8 VGTKLPELKIYGDPTFIVSTAIATRDYQDVHHDRDKAQAKGSKDIFVNILTDTGLVQRYL 67
Query 64 TDWAGPSALIKSIGLRLGVPWYAYDTVTFSGEVTAVNDGLITVKVVGRNTLGDHVTATVE 123
TDWAG +A+I+SIGLRLGVPWYAYDTVTFSGEVTAV L+TVKVVG N+LGDHV AT
Sbjct 68 TDWAGSNAVIRSIGLRLGVPWYAYDTVTFSGEVTAVEGDLVTVKVVGNNSLGDHVIATAT 127
Query 124 LSM 126
L++
Sbjct 128 LTL 130
>gi|315442544|ref|YP_004075423.1| MaoC-like protein [Mycobacterium sp. Spyr1]
gi|315260847|gb|ADT97588.1| MaoC-like protein [Mycobacterium sp. Spyr1]
Length=133
Score = 208 bits (529), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 98/125 (79%), Positives = 114/125 (92%), Gaps = 0/125 (0%)
Query 4 VGAVLPELKLYGDPTFIVSTALATRDFQDVHHDRDKAVAQGSKDIFVNILTDTGLVQRYV 63
VG LPEL++YGDPTFIVSTA+ATRD+QDVHHDRDKA A+GSKDIFVNILTDTGLVQRY+
Sbjct 8 VGTTLPELRIYGDPTFIVSTAIATRDYQDVHHDRDKAQAKGSKDIFVNILTDTGLVQRYL 67
Query 64 TDWAGPSALIKSIGLRLGVPWYAYDTVTFSGEVTAVNDGLITVKVVGRNTLGDHVTATVE 123
TDWAGP+A I+SIGLRLGVPWYAYDT+TF+GEVTAV+D + TVKVVG N+LG+HV AT
Sbjct 68 TDWAGPAARIRSIGLRLGVPWYAYDTITFTGEVTAVDDDIATVKVVGANSLGNHVIATAT 127
Query 124 LSMRD 128
L++ D
Sbjct 128 LALGD 132
>gi|145222104|ref|YP_001132782.1| dehydratase [Mycobacterium gilvum PYR-GCK]
gi|145214590|gb|ABP43994.1| MaoC domain protein dehydratase [Mycobacterium gilvum PYR-GCK]
Length=133
Score = 207 bits (527), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 98/125 (79%), Positives = 113/125 (91%), Gaps = 0/125 (0%)
Query 4 VGAVLPELKLYGDPTFIVSTALATRDFQDVHHDRDKAVAQGSKDIFVNILTDTGLVQRYV 63
VG LPEL +YGDPTFIVSTA+ATRD+QDVHHDRDKA A+GSKDIFVNILTDTGLVQRY+
Sbjct 8 VGTTLPELTIYGDPTFIVSTAIATRDYQDVHHDRDKAQAKGSKDIFVNILTDTGLVQRYL 67
Query 64 TDWAGPSALIKSIGLRLGVPWYAYDTVTFSGEVTAVNDGLITVKVVGRNTLGDHVTATVE 123
TDWAGP+A I+SIGLRLGVPWYAYDT+TF+GEVTAV+D + TVKVVG N+LG+HV AT
Sbjct 68 TDWAGPAARIRSIGLRLGVPWYAYDTITFTGEVTAVDDDIATVKVVGANSLGNHVIATAT 127
Query 124 LSMRD 128
L++ D
Sbjct 128 LALGD 132
>gi|312138121|ref|YP_004005457.1| dehydrogenase [Rhodococcus equi 103S]
gi|311887460|emb|CBH46772.1| putative dehydrogenase [Rhodococcus equi 103S]
Length=140
Score = 197 bits (500), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 95/125 (76%), Positives = 107/125 (86%), Gaps = 0/125 (0%)
Query 4 VGAVLPELKLYGDPTFIVSTALATRDFQDVHHDRDKAVAQGSKDIFVNILTDTGLVQRYV 63
VG LP L ++GDPTFIVSTALATRDFQDVHHDRDKA +GSKDIFVNILTDTGLVQR+V
Sbjct 9 VGDQLPGLSIHGDPTFIVSTALATRDFQDVHHDRDKAQQRGSKDIFVNILTDTGLVQRFV 68
Query 64 TDWAGPSALIKSIGLRLGVPWYAYDTVTFSGEVTAVNDGLITVKVVGRNTLGDHVTATVE 123
TDWAGP A + SI LRLGVPWYAYDT+ SGEV A DGL+TVKVVG+++LGDH+T+TV
Sbjct 69 TDWAGPRARLTSIKLRLGVPWYAYDTLHLSGEVIAAEDGLVTVKVVGKDSLGDHITSTVT 128
Query 124 LSMRD 128
L M D
Sbjct 129 LVMND 133
>gi|325674974|ref|ZP_08154661.1| MaoC family dehydratase [Rhodococcus equi ATCC 33707]
gi|325554560|gb|EGD24235.1| MaoC family dehydratase [Rhodococcus equi ATCC 33707]
Length=140
Score = 196 bits (498), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 95/125 (76%), Positives = 107/125 (86%), Gaps = 0/125 (0%)
Query 4 VGAVLPELKLYGDPTFIVSTALATRDFQDVHHDRDKAVAQGSKDIFVNILTDTGLVQRYV 63
VG LP L ++GDPTFIVSTALATRDFQDVHHDRDKA +GSKDIFVNILTDTGLVQR+V
Sbjct 9 VGDQLPGLSIHGDPTFIVSTALATRDFQDVHHDRDKAQQRGSKDIFVNILTDTGLVQRFV 68
Query 64 TDWAGPSALIKSIGLRLGVPWYAYDTVTFSGEVTAVNDGLITVKVVGRNTLGDHVTATVE 123
TDWAGP A + SI LRLGVPWYAYDT+ SGEV A DGL+TVKVVG+++LGDH+T+TV
Sbjct 69 TDWAGPLARLTSIKLRLGVPWYAYDTLHLSGEVVAAEDGLVTVKVVGKDSLGDHITSTVT 128
Query 124 LSMRD 128
L M D
Sbjct 129 LVMND 133
>gi|111021459|ref|YP_704431.1| hypothetical protein RHA1_ro04487 [Rhodococcus jostii RHA1]
gi|110820989|gb|ABG96273.1| conserved hypothetical protein [Rhodococcus jostii RHA1]
Length=140
Score = 191 bits (484), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 90/123 (74%), Positives = 105/123 (86%), Gaps = 0/123 (0%)
Query 4 VGAVLPELKLYGDPTFIVSTALATRDFQDVHHDRDKAVAQGSKDIFVNILTDTGLVQRYV 63
VG LPEL + GDPTF+VS ALATRDFQDVHHDRD A +GSKDIFVNILTDTGLVQR+V
Sbjct 9 VGTTLPELTVTGDPTFVVSAALATRDFQDVHHDRDLAQQRGSKDIFVNILTDTGLVQRFV 68
Query 64 TDWAGPSALIKSIGLRLGVPWYAYDTVTFSGEVTAVNDGLITVKVVGRNTLGDHVTATVE 123
TDWAGP+A+IKSI LRLGVPWYAYDT+T SG V +V DG++T+ VVG+N LGDH+T+ V
Sbjct 69 TDWAGPNAVIKSIALRLGVPWYAYDTLTLSGTVASVGDGVVTLDVVGKNALGDHITSKVT 128
Query 124 LSM 126
L +
Sbjct 129 LVL 131
>gi|226363825|ref|YP_002781607.1| hypothetical protein ROP_44150 [Rhodococcus opacus B4]
gi|226242314|dbj|BAH52662.1| hypothetical protein [Rhodococcus opacus B4]
Length=140
Score = 190 bits (482), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 89/121 (74%), Positives = 105/121 (87%), Gaps = 0/121 (0%)
Query 4 VGAVLPELKLYGDPTFIVSTALATRDFQDVHHDRDKAVAQGSKDIFVNILTDTGLVQRYV 63
VG LPEL + GDPTF+VS ALATRDFQDVHHDRD A +GSKDIFVNILTDTGLVQR+V
Sbjct 9 VGTTLPELSVTGDPTFVVSAALATRDFQDVHHDRDLAQQRGSKDIFVNILTDTGLVQRFV 68
Query 64 TDWAGPSALIKSIGLRLGVPWYAYDTVTFSGEVTAVNDGLITVKVVGRNTLGDHVTATVE 123
TDWAGP+A+IKSI LRLGVPWYAYDT+T SG V +V+DG++T+ V+G+N LGDH+T+ V
Sbjct 69 TDWAGPTAVIKSIALRLGVPWYAYDTLTLSGTVASVDDGVVTLDVLGKNGLGDHITSKVT 128
Query 124 L 124
L
Sbjct 129 L 129
>gi|226304200|ref|YP_002764158.1| hypothetical protein RER_07110 [Rhodococcus erythropolis PR4]
gi|229494159|ref|ZP_04387922.1| putative MaoC like domain protein [Rhodococcus erythropolis SK121]
gi|226183315|dbj|BAH31419.1| conserved hypothetical protein [Rhodococcus erythropolis PR4]
gi|229318521|gb|EEN84379.1| putative MaoC like domain protein [Rhodococcus erythropolis SK121]
Length=148
Score = 189 bits (481), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 88/123 (72%), Positives = 106/123 (87%), Gaps = 0/123 (0%)
Query 4 VGAVLPELKLYGDPTFIVSTALATRDFQDVHHDRDKAVAQGSKDIFVNILTDTGLVQRYV 63
VG VLP+L +YGDPTF+VS ALATRDFQDVHHDRD A +GSKDIFVNILTDTGLVQR+V
Sbjct 11 VGEVLPQLSIYGDPTFVVSAALATRDFQDVHHDRDLAQKRGSKDIFVNILTDTGLVQRFV 70
Query 64 TDWAGPSALIKSIGLRLGVPWYAYDTVTFSGEVTAVNDGLITVKVVGRNTLGDHVTATVE 123
TDWAGP A++ SI LRLGVPWYAYDT+T SG VT+ ++ L+++ VVG+N+LGDH+TA V
Sbjct 71 TDWAGPRAVLTSIKLRLGVPWYAYDTLTLSGTVTSYDEDLVSLAVVGKNSLGDHITAQVT 130
Query 124 LSM 126
L+
Sbjct 131 LAF 133
>gi|54022416|ref|YP_116658.1| hypothetical protein nfa4520 [Nocardia farcinica IFM 10152]
gi|54013924|dbj|BAD55294.1| hypothetical protein [Nocardia farcinica IFM 10152]
Length=145
Score = 184 bits (468), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 87/118 (74%), Positives = 104/118 (89%), Gaps = 0/118 (0%)
Query 4 VGAVLPELKLYGDPTFIVSTALATRDFQDVHHDRDKAVAQGSKDIFVNILTDTGLVQRYV 63
VG LPEL ++ DPTF++STA+ATRDFQDVHHDRDKAVA+GSKDIFVNILTDTGLVQR+V
Sbjct 16 VGTTLPELVIHADPTFVISTAIATRDFQDVHHDRDKAVARGSKDIFVNILTDTGLVQRFV 75
Query 64 TDWAGPSALIKSIGLRLGVPWYAYDTVTFSGEVTAVNDGLITVKVVGRNTLGDHVTAT 121
TDWAGP A++KSI LRLGVP YA DT+T +G VT V+D +T+ VVGR++LGDH+TAT
Sbjct 76 TDWAGPRAVVKSIALRLGVPLYAGDTLTLTGTVTEVSDTDVTIAVVGRDSLGDHITAT 133
>gi|343925846|ref|ZP_08765361.1| hypothetical protein GOALK_050_01410 [Gordonia alkanivorans NBRC
16433]
gi|343764197|dbj|GAA12287.1| hypothetical protein GOALK_050_01410 [Gordonia alkanivorans NBRC
16433]
Length=147
Score = 181 bits (460), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 88/124 (71%), Positives = 105/124 (85%), Gaps = 1/124 (0%)
Query 4 VGAVLPELKLYGDPTFIVSTALATRDFQDVHHDRDKAVAQGSKDIFVNILTDTGLVQRYV 63
VG LP L + PTF+V+TALATRDFQDVHHDRD A A+GSKDIFVNILTDTGLV+R+V
Sbjct 11 VGTALPPLVIEATPTFVVATALATRDFQDVHHDRDLAQAKGSKDIFVNILTDTGLVERFV 70
Query 64 TDWAGPSALIKSIGLRLGVPWYAYDTVTFSGEVTAV-NDGLITVKVVGRNTLGDHVTATV 122
TDWAGP+A I+SI L+LGVPWYAYD+VTF+GEVT V +DGL+TV V G N+LG HV +TV
Sbjct 71 TDWAGPTARIRSISLKLGVPWYAYDSVTFTGEVTEVADDGLLTVAVTGTNSLGKHVISTV 130
Query 123 ELSM 126
L++
Sbjct 131 TLTI 134
>gi|262200884|ref|YP_003272092.1| hypothetical protein Gbro_0886 [Gordonia bronchialis DSM 43247]
gi|262084231|gb|ACY20199.1| conserved hypothetical protein [Gordonia bronchialis DSM 43247]
Length=141
Score = 179 bits (455), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 86/119 (73%), Positives = 99/119 (84%), Gaps = 0/119 (0%)
Query 8 LPELKLYGDPTFIVSTALATRDFQDVHHDRDKAVAQGSKDIFVNILTDTGLVQRYVTDWA 67
LP L + PTF+VSTALATRDFQDVHHDRD A A+GS DIFVNILTDTGLV+R+VTDWA
Sbjct 15 LPPLVIEATPTFVVSTALATRDFQDVHHDRDLAQAKGSTDIFVNILTDTGLVERFVTDWA 74
Query 68 GPSALIKSIGLRLGVPWYAYDTVTFSGEVTAVNDGLITVKVVGRNTLGDHVTATVELSM 126
GPSA I+SI L+LGVPWYAYD VTF+GEVTAV+ GL+T+ V G N LG HV +TV + M
Sbjct 75 GPSARIRSIALKLGVPWYAYDAVTFTGEVTAVDGGLVTIAVTGTNKLGKHVISTVTVDM 133
>gi|169627720|ref|YP_001701369.1| hypothetical protein MAB_0617 [Mycobacterium abscessus ATCC 19977]
gi|169239687|emb|CAM60715.1| Conserved hypothetical protein [Mycobacterium abscessus]
Length=130
Score = 176 bits (447), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 94/126 (75%), Positives = 108/126 (86%), Gaps = 0/126 (0%)
Query 1 MTVVGAVLPELKLYGDPTFIVSTALATRDFQDVHHDRDKAVAQGSKDIFVNILTDTGLVQ 60
MT VG LPELKL G PTFIVSTALATRDFQDVHHDRD A A+GSKDIF+NIL+DTGLV+
Sbjct 1 MTTVGEKLPELKLEGTPTFIVSTALATRDFQDVHHDRDLAQAKGSKDIFINILSDTGLVE 60
Query 61 RYVTDWAGPSALIKSIGLRLGVPWYAYDTVTFSGEVTAVNDGLITVKVVGRNTLGDHVTA 120
R+VTDWAGP+A +KSI LRLGVPWYAYDT F+GEV AV DG++ V VVG N+LG HVTA
Sbjct 61 RFVTDWAGPAARVKSISLRLGVPWYAYDTTVFTGEVAAVEDGVVEVDVVGNNSLGAHVTA 120
Query 121 TVELSM 126
V+L++
Sbjct 121 KVKLTI 126
>gi|319948636|ref|ZP_08022760.1| dehydrogenase [Dietzia cinnamea P4]
gi|319437717|gb|EFV92713.1| dehydrogenase [Dietzia cinnamea P4]
Length=143
Score = 172 bits (436), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 86/124 (70%), Positives = 102/124 (83%), Gaps = 1/124 (0%)
Query 4 VGAVLPELKLYGDPTFIVSTALATRDFQDVHHDRDKAVAQGSKDIFVNILTDTGLVQRYV 63
VG LPEL + G PTFIV++ALATRDFQDVHHDRD A +GSKDIFVNILTDTGLVQR+V
Sbjct 15 VGDRLPELTIEGTPTFIVASALATRDFQDVHHDRDLAHQKGSKDIFVNILTDTGLVQRFV 74
Query 64 TDWAGPSALIKSIGLRLGVPWYAYDTVTFSGEVTAV-NDGLITVKVVGRNTLGDHVTATV 122
TDWAG A I SI LRLGVPW AYD++T +GEVT + +DGL+T+K+VG ++LG HVT+T
Sbjct 75 TDWAGQRARITSIKLRLGVPWCAYDSLTLTGEVTGIDDDGLVTLKIVGTDSLGAHVTSTA 134
Query 123 ELSM 126
L M
Sbjct 135 TLYM 138
>gi|326384605|ref|ZP_08206284.1| hypothetical protein SCNU_16773 [Gordonia neofelifaecis NRRL
B-59395]
gi|326196739|gb|EGD53934.1| hypothetical protein SCNU_16773 [Gordonia neofelifaecis NRRL
B-59395]
Length=143
Score = 168 bits (426), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 82/122 (68%), Positives = 96/122 (79%), Gaps = 0/122 (0%)
Query 4 VGAVLPELKLYGDPTFIVSTALATRDFQDVHHDRDKAVAQGSKDIFVNILTDTGLVQRYV 63
VG LP L + PTF+V+TALATRDFQDVHHDRD A +GSKDIFVNILTDTGLV+R+V
Sbjct 18 VGQTLPPLVIDAPPTFVVATALATRDFQDVHHDRDLAQQKGSKDIFVNILTDTGLVERFV 77
Query 64 TDWAGPSALIKSIGLRLGVPWYAYDTVTFSGEVTAVNDGLITVKVVGRNTLGDHVTATVE 123
TDWAGP A I +I L+LGVPWYAYDT+TF+GEVT V +TV V G N+LG HV +TV
Sbjct 78 TDWAGPRARIGAIKLKLGVPWYAYDTLTFTGEVTDVAGAEVTVAVTGTNSLGKHVISTVT 137
Query 124 LS 125
+
Sbjct 138 FT 139
>gi|302525653|ref|ZP_07277995.1| dehydratase [Streptomyces sp. AA4]
gi|302434548|gb|EFL06364.1| dehydratase [Streptomyces sp. AA4]
Length=137
Score = 167 bits (422), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 80/126 (64%), Positives = 101/126 (81%), Gaps = 0/126 (0%)
Query 4 VGAVLPELKLYGDPTFIVSTALATRDFQDVHHDRDKAVAQGSKDIFVNILTDTGLVQRYV 63
VG LP + + PTF++STALATRDFQDVHHDRD AVA+GSKDIF+NILTDTGLVQRYV
Sbjct 10 VGTELPPMVIEATPTFVISTALATRDFQDVHHDRDAAVARGSKDIFLNILTDTGLVQRYV 69
Query 64 TDWAGPSALIKSIGLRLGVPWYAYDTVTFSGEVTAVNDGLITVKVVGRNTLGDHVTATVE 123
+DWAGP ALI+SI +RLGVP YA DT+TF+G+VTA + + ++V ++LG HVT TV
Sbjct 70 SDWAGPQALIRSIKIRLGVPCYAGDTLTFTGKVTARDGNDLELEVSAMDSLGAHVTGTVS 129
Query 124 LSMRDS 129
L++ +
Sbjct 130 LTLPEE 135
>gi|333918580|ref|YP_004492161.1| dehydratase [Amycolicicoccus subflavus DQS3-9A1]
gi|333480801|gb|AEF39361.1| Dehydratase [Amycolicicoccus subflavus DQS3-9A1]
Length=143
Score = 163 bits (413), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 77/127 (61%), Positives = 99/127 (78%), Gaps = 4/127 (3%)
Query 4 VGAVLPELKLYGDPTFIVSTALATRDFQDVHHDRDKAVAQGSKDIFVNILTDTGLVQRYV 63
+G LPEL + PTFI+STA+ATRDF+DVHHDRD AVA+G+KDIF+NILTD GLVQRYV
Sbjct 11 IGMELPELVVDATPTFIISTAIATRDFEDVHHDRDAAVARGTKDIFLNILTDNGLVQRYV 70
Query 64 TDWAGPSALIKSIGLRLGVPWYAYDTVTFSGEVTAV----NDGLITVKVVGRNTLGDHVT 119
TDWAGP AL++SI +RLGVP YA DT+TFSG V + ++V R++LGDH+T
Sbjct 71 TDWAGPEALVRSINIRLGVPCYANDTLTFSGRVAEETVVGRESRFVIEVRARDSLGDHIT 130
Query 120 ATVELSM 126
TV++++
Sbjct 131 GTVQIAV 137
>gi|296141528|ref|YP_003648771.1| hypothetical protein Tpau_3857 [Tsukamurella paurometabola DSM
20162]
gi|296029662|gb|ADG80432.1| conserved hypothetical protein [Tsukamurella paurometabola DSM
20162]
Length=138
Score = 163 bits (412), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 76/118 (65%), Positives = 92/118 (78%), Gaps = 0/118 (0%)
Query 4 VGAVLPELKLYGDPTFIVSTALATRDFQDVHHDRDKAVAQGSKDIFVNILTDTGLVQRYV 63
VG LP L + PTF+ STA+ATRDFQDVHHDRD A A+GSKDIFVNILTD GLVQRY+
Sbjct 14 VGTALPPLTIDASPTFVTSTAIATRDFQDVHHDRDAAHARGSKDIFVNILTDNGLVQRYM 73
Query 64 TDWAGPSALIKSIGLRLGVPWYAYDTVTFSGEVTAVNDGLITVKVVGRNTLGDHVTAT 121
TDWAGP A + +I +RLGVP YAYDT+TFSG VT ++ + V V +++LGDH+T T
Sbjct 74 TDWAGPEAFVCAIDIRLGVPCYAYDTLTFSGTVTEIDGDRVIVAVTAKDSLGDHITGT 131
>gi|145595147|ref|YP_001159444.1| hypothetical protein Strop_2622 [Salinispora tropica CNB-440]
gi|145304484|gb|ABP55066.1| hypothetical protein Strop_2622 [Salinispora tropica CNB-440]
Length=129
Score = 162 bits (410), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 77/121 (64%), Positives = 95/121 (79%), Gaps = 0/121 (0%)
Query 4 VGAVLPELKLYGDPTFIVSTALATRDFQDVHHDRDKAVAQGSKDIFVNILTDTGLVQRYV 63
VG VLPEL++ PTF++STA+ATRDFQDVHHDRD+AV +GSKDIF+NILT TGLVQRYV
Sbjct 5 VGVVLPELRILVTPTFVISTAVATRDFQDVHHDRDQAVRRGSKDIFLNILTTTGLVQRYV 64
Query 64 TDWAGPSALIKSIGLRLGVPWYAYDTVTFSGEVTAVNDGLITVKVVGRNTLGDHVTATVE 123
TDWAG +A++ + +RLG P YAYDT+ +G+V V+ V VVGR T GDHVT VE
Sbjct 65 TDWAGATAMVHRVAIRLGAPCYAYDTLVLTGQVEQVSSTGCVVAVVGRVTGGDHVTGRVE 124
Query 124 L 124
+
Sbjct 125 V 125
>gi|300784418|ref|YP_003764709.1| hypothetical protein AMED_2512 [Amycolatopsis mediterranei U32]
gi|299793932|gb|ADJ44307.1| conserved hypothetical protein [Amycolatopsis mediterranei U32]
gi|340525839|gb|AEK41044.1| hypothetical protein RAM_12770 [Amycolatopsis mediterranei S699]
Length=128
Score = 160 bits (405), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 81/127 (64%), Positives = 101/127 (80%), Gaps = 1/127 (0%)
Query 1 MTVV-GAVLPELKLYGDPTFIVSTALATRDFQDVHHDRDKAVAQGSKDIFVNILTDTGLV 59
MTV G LP L + PTF+VSTALATRDFQDVHHDRD AVA+GSKDIF+NILTDTGLV
Sbjct 1 MTVAEGTELPPLTIEATPTFVVSTALATRDFQDVHHDRDSAVARGSKDIFLNILTDTGLV 60
Query 60 QRYVTDWAGPSALIKSIGLRLGVPWYAYDTVTFSGEVTAVNDGLITVKVVGRNTLGDHVT 119
QR+V++WAGP ALI+S+ +RLGVP YAYDT+TF+G V + + V V G ++LG+HV
Sbjct 61 QRFVSEWAGPEALIRSVKIRLGVPCYAYDTLTFTGRVVSRTGNDVVVSVSGVDSLGEHVA 120
Query 120 ATVELSM 126
TVE+++
Sbjct 121 GTVEVTL 127
>gi|159038393|ref|YP_001537646.1| hypothetical protein Sare_2820 [Salinispora arenicola CNS-205]
gi|157917228|gb|ABV98655.1| conserved hypothetical protein [Salinispora arenicola CNS-205]
Length=129
Score = 159 bits (402), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 74/123 (61%), Positives = 95/123 (78%), Gaps = 0/123 (0%)
Query 2 TVVGAVLPELKLYGDPTFIVSTALATRDFQDVHHDRDKAVAQGSKDIFVNILTDTGLVQR 61
T VG VLPEL++ PTF++STA+ATRDFQDVHHDRD+AV +GS+DIF+NILT GLVQR
Sbjct 3 TAVGVVLPELRILVTPTFVISTAVATRDFQDVHHDRDQAVRRGSRDIFLNILTTNGLVQR 62
Query 62 YVTDWAGPSALIKSIGLRLGVPWYAYDTVTFSGEVTAVNDGLITVKVVGRNTLGDHVTAT 121
YVTDWAG +++++ +RLG P YAYDT+ +G+VT + TV VVGR GDHVT
Sbjct 63 YVTDWAGAGVMVRNVAVRLGTPCYAYDTLVLTGQVTEASSEGCTVAVVGRAGGGDHVTGQ 122
Query 122 VEL 124
V++
Sbjct 123 VQV 125
>gi|326331717|ref|ZP_08198005.1| putative MaoC like domain protein [Nocardioidaceae bacterium
Broad-1]
gi|325950516|gb|EGD42568.1| putative MaoC like domain protein [Nocardioidaceae bacterium
Broad-1]
Length=127
Score = 153 bits (387), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 76/121 (63%), Positives = 90/121 (75%), Gaps = 0/121 (0%)
Query 5 GAVLPELKLYGDPTFIVSTALATRDFQDVHHDRDKAVAQGSKDIFVNILTDTGLVQRYVT 64
G LP +L PT IVSTALATRDFQDVHHDRD+A A GSKDIF+NILT T L +RYVT
Sbjct 6 GEKLPAWELPITPTLIVSTALATRDFQDVHHDRDRAQAAGSKDIFMNILTSTALCERYVT 65
Query 65 DWAGPSALIKSIGLRLGVPWYAYDTVTFSGEVTAVNDGLITVKVVGRNTLGDHVTATVEL 124
DWAG IK I +RLG P Y YDT++F+GEVT V+DG+ T+ V G +LG HVT TV +
Sbjct 66 DWAGTDVQIKGISIRLGAPAYPYDTLSFTGEVTDVSDGIATIAVTGSVSLGAHVTGTVRV 125
Query 125 S 125
+
Sbjct 126 A 126
>gi|271969392|ref|YP_003343588.1| dehydratase [Streptosporangium roseum DSM 43021]
gi|270512567|gb|ACZ90845.1| dehydratase [Streptosporangium roseum DSM 43021]
Length=136
Score = 150 bits (378), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 74/125 (60%), Positives = 93/125 (75%), Gaps = 0/125 (0%)
Query 4 VGAVLPELKLYGDPTFIVSTALATRDFQDVHHDRDKAVAQGSKDIFVNILTDTGLVQRYV 63
+G+VLP+L + PT IVSTALAT DF VHHD +A AQGSKDIF+NILT GLV+RYV
Sbjct 11 IGSVLPDLVIELTPTAIVSTALATMDFTPVHHDAGRARAQGSKDIFLNILTTMGLVERYV 70
Query 64 TDWAGPSALIKSIGLRLGVPWYAYDTVTFSGEVTAVNDGLITVKVVGRNTLGDHVTATVE 123
TDWAGP ALI+ I ++LGVP YA DT+TF+G V A +G V+V G+ +LGDH + TV
Sbjct 71 TDWAGPEALIRGINVKLGVPAYAGDTLTFTGAVVACENGEFAVEVRGKVSLGDHASGTVR 130
Query 124 LSMRD 128
++ D
Sbjct 131 FALPD 135
>gi|119717011|ref|YP_923976.1| dehydratase [Nocardioides sp. JS614]
gi|119537672|gb|ABL82289.1| MaoC domain protein dehydratase [Nocardioides sp. JS614]
Length=126
Score = 149 bits (375), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 76/122 (63%), Positives = 89/122 (73%), Gaps = 0/122 (0%)
Query 5 GAVLPELKLYGDPTFIVSTALATRDFQDVHHDRDKAVAQGSKDIFVNILTDTGLVQRYVT 64
G LPE L PT IVSTA+ATRD+QDVHHDRD A A GSKDIF+NILT GLV+RYV
Sbjct 4 GDPLPEWSLPLTPTTIVSTAIATRDWQDVHHDRDVAQAAGSKDIFMNILTSNGLVERYVV 63
Query 65 DWAGPSALIKSIGLRLGVPWYAYDTVTFSGEVTAVNDGLITVKVVGRNTLGDHVTATVEL 124
D GP +K I +RLG P Y YDT+TF GEVT V DG+ T+ VVG +LGDHVT TV +
Sbjct 64 DALGPDTELKGIAIRLGAPAYPYDTLTFRGEVTGVEDGIATIAVVGSVSLGDHVTGTVRV 123
Query 125 SM 126
++
Sbjct 124 AV 125
>gi|229489039|ref|ZP_04382905.1| putative MaoC like domain protein [Rhodococcus erythropolis SK121]
gi|229324543|gb|EEN90298.1| putative MaoC like domain protein [Rhodococcus erythropolis SK121]
Length=142
Score = 142 bits (359), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 68/127 (54%), Positives = 91/127 (72%), Gaps = 0/127 (0%)
Query 3 VVGAVLPELKLYGDPTFIVSTALATRDFQDVHHDRDKAVAQGSKDIFVNILTDTGLVQRY 62
VVG LPEL + T IV+TA+ATRDFQDVHHD A +GSKD+F+NILT GLV RY
Sbjct 13 VVGEALPELAIPLTRTLIVATAIATRDFQDVHHDPSLAQERGSKDVFMNILTSNGLVGRY 72
Query 63 VTDWAGPSALIKSIGLRLGVPWYAYDTVTFSGEVTAVNDGLITVKVVGRNTLGDHVTATV 122
VTDWAG ++ ++ I +RLG P Y DT+T +GEV + DG++ VKV G N+LG+H + TV
Sbjct 73 VTDWAGSASTLRRIAIRLGAPNYPGDTMTMTGEVVSKEDGVVVVKVQGANSLGNHASGTV 132
Query 123 ELSMRDS 129
++ ++
Sbjct 133 AVAFKEE 139
>gi|226308561|ref|YP_002768521.1| beta-hydroxyacyl-[acyl-carrier- protein] dehydratase subunit
[Rhodococcus erythropolis PR4]
gi|226187678|dbj|BAH35782.1| putative beta-hydroxyacyl-[acyl-carrier- protein] dehydratase
subunit [Rhodococcus erythropolis PR4]
Length=142
Score = 142 bits (359), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 68/127 (54%), Positives = 91/127 (72%), Gaps = 0/127 (0%)
Query 3 VVGAVLPELKLYGDPTFIVSTALATRDFQDVHHDRDKAVAQGSKDIFVNILTDTGLVQRY 62
VVG LPEL + T IV+TA+ATRDFQDVHHD A +GSKD+F+NILT GLV RY
Sbjct 13 VVGEALPELAIPLTRTLIVATAIATRDFQDVHHDPSLAQERGSKDVFMNILTSNGLVGRY 72
Query 63 VTDWAGPSALIKSIGLRLGVPWYAYDTVTFSGEVTAVNDGLITVKVVGRNTLGDHVTATV 122
VTDWAG ++ ++ I +RLG P Y DT+T +GEV + DG++ VKV G N+LG+H + TV
Sbjct 73 VTDWAGSASTLRRIAIRLGAPNYPGDTMTMTGEVVSKEDGVVVVKVQGANSLGNHASGTV 132
Query 123 ELSMRDS 129
++ ++
Sbjct 133 AVAFKEE 139
>gi|325673084|ref|ZP_08152778.1| MaoC domain protein dehydratase [Rhodococcus equi ATCC 33707]
gi|325556337|gb|EGD26005.1| MaoC domain protein dehydratase [Rhodococcus equi ATCC 33707]
Length=148
Score = 142 bits (358), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 68/122 (56%), Positives = 90/122 (74%), Gaps = 0/122 (0%)
Query 4 VGAVLPELKLYGDPTFIVSTALATRDFQDVHHDRDKAVAQGSKDIFVNILTDTGLVQRYV 63
VG VLPEL + T IV+TA+ATRDFQDVHHD + A +GSKD+F+NILT GL R+V
Sbjct 17 VGEVLPELAIPLTRTLIVATAIATRDFQDVHHDPELAQQRGSKDVFMNILTSNGLAGRFV 76
Query 64 TDWAGPSALIKSIGLRLGVPWYAYDTVTFSGEVTAVNDGLITVKVVGRNTLGDHVTATVE 123
TDWAGP A ++ + +RLG P Y DT+T SGEV + +GL+ VKVVG N+LG+H+ +V
Sbjct 77 TDWAGPFATVRRVKIRLGAPNYPGDTMTMSGEVVSKENGLVEVKVVGANSLGNHLAGSVT 136
Query 124 LS 125
++
Sbjct 137 VA 138
>gi|312141659|ref|YP_004008995.1| dehydrogenase [Rhodococcus equi 103S]
gi|311890998|emb|CBH50317.1| putative dehydrogenase [Rhodococcus equi 103S]
Length=148
Score = 142 bits (358), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 68/122 (56%), Positives = 90/122 (74%), Gaps = 0/122 (0%)
Query 4 VGAVLPELKLYGDPTFIVSTALATRDFQDVHHDRDKAVAQGSKDIFVNILTDTGLVQRYV 63
VG VLPEL + T IV+TA+ATRDFQDVHHD + A +GSKD+F+NILT GL R+V
Sbjct 17 VGEVLPELAIPLTRTLIVATAIATRDFQDVHHDPELAQQRGSKDVFMNILTSNGLAGRFV 76
Query 64 TDWAGPSALIKSIGLRLGVPWYAYDTVTFSGEVTAVNDGLITVKVVGRNTLGDHVTATVE 123
TDWAGP A ++ + +RLG P Y DT+T SGEV + +GL+ VKVVG N+LG+H+ +V
Sbjct 77 TDWAGPFATVRRVKIRLGAPNYPGDTMTMSGEVVSKENGLVEVKVVGANSLGNHLAGSVT 136
Query 124 LS 125
++
Sbjct 137 VA 138
>gi|311744300|ref|ZP_07718104.1| conserved hypothetical protein [Aeromicrobium marinum DSM 15272]
gi|311312473|gb|EFQ82386.1| conserved hypothetical protein [Aeromicrobium marinum DSM 15272]
Length=431
Score = 142 bits (357), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 69/117 (59%), Positives = 84/117 (72%), Gaps = 0/117 (0%)
Query 8 LPELKLYGDPTFIVSTALATRDFQDVHHDRDKAVAQGSKDIFVNILTDTGLVQRYVTDWA 67
LP +L PT +VSTALATRDFQDVHHDRD+++ GSKDIFVNILT TGLVQRYVTDWA
Sbjct 313 LPIWELPITPTLVVSTALATRDFQDVHHDRDRSMGHGSKDIFVNILTTTGLVQRYVTDWA 372
Query 68 GPSALIKSIGLRLGVPWYAYDTVTFSGEVTAVNDGLITVKVVGRNTLGDHVTATVEL 124
GP + S LRLG P + YDT F+G + + DG+ T+ V +LG H TA +E+
Sbjct 373 GPQTQVLSCALRLGAPAHPYDTFRFTGRIVSETDGVTTLDVTAGVSLGAHATARLEI 429
>gi|226365299|ref|YP_002783082.1| hypothetical protein ROP_58900 [Rhodococcus opacus B4]
gi|226243789|dbj|BAH54137.1| hypothetical protein [Rhodococcus opacus B4]
Length=143
Score = 138 bits (347), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 69/119 (58%), Positives = 87/119 (74%), Gaps = 0/119 (0%)
Query 4 VGAVLPELKLYGDPTFIVSTALATRDFQDVHHDRDKAVAQGSKDIFVNILTDTGLVQRYV 63
+G LPE + T IV+TALATRDFQDVHHD AV +GSKD+F+NILT GLV R+V
Sbjct 15 IGDRLPESVIPLTRTLIVATALATRDFQDVHHDPSLAVERGSKDVFMNILTTNGLVGRFV 74
Query 64 TDWAGPSALIKSIGLRLGVPWYAYDTVTFSGEVTAVNDGLITVKVVGRNTLGDHVTATV 122
TDWAGP A ++ I +RLG P Y D ++ +GEV A +DGL+TVK+ G N+LGDH + TV
Sbjct 75 TDWAGPHASLRRITVRLGAPNYPGDEMSLTGEVVAKDDGLVTVKIRGANSLGDHTSGTV 133
>gi|111022791|ref|YP_705763.1| hypothetical protein RHA1_ro05828 [Rhodococcus jostii RHA1]
gi|110822321|gb|ABG97605.1| conserved hypothetical protein [Rhodococcus jostii RHA1]
Length=143
Score = 135 bits (339), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 68/119 (58%), Positives = 85/119 (72%), Gaps = 0/119 (0%)
Query 4 VGAVLPELKLYGDPTFIVSTALATRDFQDVHHDRDKAVAQGSKDIFVNILTDTGLVQRYV 63
+G LPEL + T IV+TALATRDFQDVHHD A+ +GSKD+F+NILT GLV R+V
Sbjct 15 IGDRLPELVIPLTRTLIVATALATRDFQDVHHDPALALERGSKDVFMNILTTNGLVGRFV 74
Query 64 TDWAGPSALIKSIGLRLGVPWYAYDTVTFSGEVTAVNDGLITVKVVGRNTLGDHVTATV 122
TDWAGP A ++ I +RLG P Y D + +GEV A + GL+TV + G N+LGDH T TV
Sbjct 75 TDWAGPHASLRRIAVRLGAPNYPGDAMAVTGEVVAKDGGLVTVNIRGANSLGDHATGTV 133
>gi|269127686|ref|YP_003301056.1| MaoC domain-containing protein dehydratase [Thermomonospora curvata
DSM 43183]
gi|268312644|gb|ACY99018.1| MaoC domain protein dehydratase [Thermomonospora curvata DSM
43183]
Length=143
Score = 134 bits (338), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 69/125 (56%), Positives = 90/125 (72%), Gaps = 2/125 (1%)
Query 4 VGAVLPELKLYGDPTFIVSTALATRDFQDVHHDRDKAVAQGSKDIFVNILTDTGLVQRYV 63
VG LPEL + T IV+TA+A+RD+QDVHHD + AV +GSKDIF+NILT GLV RYV
Sbjct 13 VGEKLPELAIPLTRTLIVATAIASRDYQDVHHDPELAVRRGSKDIFMNILTTNGLVDRYV 72
Query 64 TDWAGPSALIKSIGLRLGVPWYAYDTVTFSGEVTAVNDGL--ITVKVVGRNTLGDHVTAT 121
T WAGP+A +K+I +RLGVP Y DT+T +G V+A +D + + V G N+LG HVT T
Sbjct 73 TSWAGPAARVKAIKIRLGVPNYPGDTMTLTGTVSAKDDAARRVEIAVRGTNSLGAHVTGT 132
Query 122 VELSM 126
V + +
Sbjct 133 VVIEL 137
>gi|329895413|ref|ZP_08270994.1| hypothetical protein IMCC3088_1454 [gamma proteobacterium IMCC3088]
gi|328922296|gb|EGG29642.1| hypothetical protein IMCC3088_1454 [gamma proteobacterium IMCC3088]
Length=132
Score = 131 bits (330), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 69/125 (56%), Positives = 87/125 (70%), Gaps = 2/125 (1%)
Query 4 VGAVLPELKLYGDPTFIVSTALATRDFQDVHHDRDKAVAQGSKDIFVNILTDTGLVQRYV 63
VG LP+L L P IV+ A+A+RD+Q+VHHD+D A A GS DIF+NILT GLV R+V
Sbjct 5 VGDELPQLSLEITPGLIVAGAIASRDYQNVHHDKDAAQALGSPDIFMNILTTNGLVGRFV 64
Query 64 TDWAGPSALIKSIGLRLGVPWYAYDTVTFSGEVTAVN--DGLITVKVVGRNTLGDHVTAT 121
TDWAGPSA +K + +RLGVP Y DT+ SG+V A + G V V G+N LG HVT T
Sbjct 65 TDWAGPSARLKKVSIRLGVPNYPGDTMVLSGDVLAWDPTSGECQVSVKGKNGLGYHVTGT 124
Query 122 VELSM 126
V+L+
Sbjct 125 VDLAF 129
>gi|256389294|ref|YP_003110858.1| MaoC domain-containing protein dehydratase [Catenulispora acidiphila
DSM 44928]
gi|256355520|gb|ACU69017.1| MaoC domain protein dehydratase [Catenulispora acidiphila DSM
44928]
Length=133
Score = 131 bits (329), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 70/122 (58%), Positives = 83/122 (69%), Gaps = 1/122 (0%)
Query 4 VGAVLPELKLYGDPTFIVSTALATRDFQDVHHDRDKAVAQGSKDIFVNILTDTGLVQRYV 63
VG LPEL + PT IVS A+A+RD+QDVHHD A +GS DIF+NILT GLV RYV
Sbjct 7 VGEALPELIIPITPTRIVSGAIASRDYQDVHHDVPAAREKGSPDIFMNILTTNGLVGRYV 66
Query 64 TDWAGPSALIKSIGLRLGVPWYAYDTVTFSGEVTAV-NDGLITVKVVGRNTLGDHVTATV 122
TDWAG A I I +RLGVP Y DT+T +G V +V DG + V + G N LG+HVT TV
Sbjct 67 TDWAGAEARILKIAIRLGVPNYPGDTMTLTGSVASVGEDGAVEVAIRGANQLGNHVTGTV 126
Query 123 EL 124
L
Sbjct 127 TL 128
>gi|326384855|ref|ZP_08206530.1| hypothetical protein SCNU_18017 [Gordonia neofelifaecis NRRL
B-59395]
gi|326196374|gb|EGD53573.1| hypothetical protein SCNU_18017 [Gordonia neofelifaecis NRRL
B-59395]
Length=130
Score = 126 bits (317), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 66/124 (54%), Positives = 87/124 (71%), Gaps = 2/124 (1%)
Query 1 MTVVGAVLPELKLYGDPTFIVSTALATRDFQDVHHDRDKAVAQGSKDIFVNILTDTGLVQ 60
M VG VLP L + D T I + ALA++DF+DVHHD KA A+GS+++F++I T GL+
Sbjct 1 MPAVGDVLPALTIDVDHTMIAAGALASQDFEDVHHDPSKARARGSREVFMSINTTNGLID 60
Query 61 RYVTDWAGPSALIKSIGLRLGVPWYAYDTVTFSGEVTAVNDGLITVKVVGRNTLGDHVTA 120
R++TDW GP+A I S+ LRLGVP YA D++ +GEVT +TV+VVG N LG HV A
Sbjct 61 RFITDWTGPAARIDSVKLRLGVPMYAGDSLALTGEVTHTEP--LTVRVVGANGLGVHVRA 118
Query 121 TVEL 124
TV L
Sbjct 119 TVVL 122
>gi|226303886|ref|YP_002763844.1| hypothetical protein RER_03970 [Rhodococcus erythropolis PR4]
gi|226183001|dbj|BAH31105.1| conserved hypothetical protein [Rhodococcus erythropolis PR4]
Length=137
Score = 125 bits (315), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 63/122 (52%), Positives = 86/122 (71%), Gaps = 0/122 (0%)
Query 4 VGAVLPELKLYGDPTFIVSTALATRDFQDVHHDRDKAVAQGSKDIFVNILTDTGLVQRYV 63
VG+ LP L+L D T IV+TA+A++DF+DVHHD KA +G+ DIF++I T GL+ RY+
Sbjct 9 VGSTLPSLELPLDRTLIVATAIASQDFEDVHHDPGKAQDRGTPDIFMSINTTNGLIDRYI 68
Query 64 TDWAGPSALIKSIGLRLGVPWYAYDTVTFSGEVTAVNDGLITVKVVGRNTLGDHVTATVE 123
TDW+GP + I I LRLGVP + DT+TF+G+V + +TV V+G+N G HVTA V
Sbjct 69 TDWSGPGSRIVKISLRLGVPNFPGDTMTFTGKVIDTDGRTLTVTVLGKNARGTHVTADVT 128
Query 124 LS 125
L
Sbjct 129 LE 130
>gi|302535672|ref|ZP_07288014.1| MaoC domain-containing protein dehydratase [Streptomyces sp.
C]
gi|302444567|gb|EFL16383.1| MaoC domain-containing protein dehydratase [Streptomyces sp.
C]
Length=129
Score = 125 bits (315), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 62/123 (51%), Positives = 86/123 (70%), Gaps = 0/123 (0%)
Query 4 VGAVLPELKLYGDPTFIVSTALATRDFQDVHHDRDKAVAQGSKDIFVNILTDTGLVQRYV 63
VG LP L++ T IV+ A+A+RD+QDVHHD + A A+GS D+F+NILT GLV RY+
Sbjct 3 VGDALPPLEIPVTRTLIVAGAIASRDYQDVHHDAELARAKGSPDVFMNILTTNGLVGRYI 62
Query 64 TDWAGPSALIKSIGLRLGVPWYAYDTVTFSGEVTAVNDGLITVKVVGRNTLGDHVTATVE 123
TD GP A+++ + +RLG P Y DT+T +G VTAV+ ++VVG N LG HVT TV
Sbjct 63 TDHLGPRAVLRKVAIRLGAPNYPGDTMTLTGTVTAVDGDTAEIRVVGANRLGHHVTGTVT 122
Query 124 LSM 126
+++
Sbjct 123 VTL 125
Lambda K H
0.319 0.136 0.398
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 128283502052
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40