BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv3543c Length=387 Score E Sequences producing significant alignments: (Bits) Value gi|15610679|ref|NP_218060.1| acyl-CoA dehydrogenase FADE29 [Myco... 795 0.0 gi|15843155|ref|NP_338192.1| acyl-CoA dehydrogenase, putative [M... 792 0.0 gi|240172833|ref|ZP_04751492.1| acyl-CoA dehydrogenase FadE29 [M... 727 0.0 gi|183984998|ref|YP_001853289.1| acyl-CoA dehydrogenase FadE29 [... 725 0.0 gi|118619289|ref|YP_907621.1| acyl-CoA dehydrogenase FadE29 [Myc... 720 0.0 gi|254822625|ref|ZP_05227626.1| putative acyl-CoA dehydrogenase ... 712 0.0 gi|342862369|ref|ZP_08719009.1| acyl-CoA dehydrogenase [Mycobact... 709 0.0 gi|41406622|ref|NP_959458.1| FadE29 [Mycobacterium avium subsp. ... 709 0.0 gi|254773575|ref|ZP_05215091.1| putative acyl-CoA dehydrogenase ... 708 0.0 gi|296166572|ref|ZP_06849002.1| acyl-CoA dehydrogenase [Mycobact... 701 0.0 gi|333992330|ref|YP_004524944.1| acyl-CoA dehydrogenase [Mycobac... 694 0.0 gi|126437624|ref|YP_001073315.1| acyl-CoA dehydrogenase domain-c... 691 0.0 gi|108801638|ref|YP_641835.1| acyl-CoA dehydrogenase-like protei... 690 0.0 gi|120406204|ref|YP_956033.1| acyl-CoA dehydrogenase domain-cont... 675 0.0 gi|145222102|ref|YP_001132780.1| acyl-CoA dehydrogenase domain-c... 652 0.0 gi|118471380|ref|YP_890219.1| acyl-CoA dehydrogenase [Mycobacter... 647 0.0 gi|169627718|ref|YP_001701367.1| putative acyl-CoA dehydrogenase... 627 1e-177 gi|226304198|ref|YP_002764156.1| acyl-CoA dehydrogenase [Rhodoco... 593 2e-167 gi|229494630|ref|ZP_04388393.1| Acyl-CoA dehydrogenase, middle d... 592 3e-167 gi|111021457|ref|YP_704429.1| acyl-CoA dehydrogenase [Rhodococcu... 592 3e-167 gi|226363823|ref|YP_002781605.1| acyl-CoA dehydrogenase [Rhodoco... 589 2e-166 gi|312138119|ref|YP_004005455.1| acyl-CoA dehydrogenase [Rhodoco... 584 8e-165 gi|262200882|ref|YP_003272090.1| acyl-CoA dehydrogenase domain-c... 578 6e-163 gi|343925844|ref|ZP_08765359.1| putative acyl-CoA dehydrogenase ... 575 4e-162 gi|54022414|ref|YP_116656.1| putative acyl-CoA dehydrogenase [No... 557 9e-157 gi|296141526|ref|YP_003648769.1| acyl-CoA dehydrogenase domain-c... 552 3e-155 gi|302525651|ref|ZP_07277993.1| pimeloyl-CoA dehydrogenase, larg... 551 6e-155 gi|326384607|ref|ZP_08206286.1| acyl-CoA dehydrogenase domain-co... 537 2e-150 gi|340525837|gb|AEK41042.1| acyl-CoA dehydrogenase [Amycolatopsi... 536 2e-150 gi|300784416|ref|YP_003764707.1| acyl-CoA dehydrogenase [Amycola... 536 2e-150 gi|319948638|ref|ZP_08022762.1| acyl-CoA dehydrogenase domain pr... 516 2e-144 gi|333918578|ref|YP_004492159.1| acyl-CoA dehydrogenase [Amycoli... 512 4e-143 gi|145595203|ref|YP_001159500.1| acyl-CoA dehydrogenase domain-c... 511 8e-143 gi|119717014|ref|YP_923979.1| acyl-CoA dehydrogenase domain-cont... 502 4e-140 gi|159038450|ref|YP_001537703.1| acyl-CoA dehydrogenase domain-c... 495 6e-138 gi|326331720|ref|ZP_08198008.1| putative acyl-CoA dehydrogenase ... 488 7e-136 gi|311744301|ref|ZP_07718105.1| acyl-CoA dehydrogenase domain pr... 486 3e-135 gi|289752256|ref|ZP_06511634.1| LOW QUALITY PROTEIN: acyl-CoA de... 482 5e-134 gi|271969394|ref|YP_003343590.1| acyl-CoA dehydrogenase protein ... 474 1e-131 gi|269127845|ref|YP_003301215.1| acyl-CoA dehydrogenase domain-c... 462 4e-128 gi|296170099|ref|ZP_06851699.1| probable acyl-CoA dehydrogenase ... 358 7e-97 gi|146217146|gb|ABQ10637.1| acyl-CoA-dehydrogenase [Pseudomonas ... 357 3e-96 gi|157961963|ref|YP_001501997.1| acyl-CoA dehydrogenase domain-c... 355 1e-95 gi|167624038|ref|YP_001674332.1| acyl-CoA dehydrogenase domain-c... 353 2e-95 gi|77359837|ref|YP_339412.1| acyl-CoA dehydrogenase [Pseudoalter... 353 3e-95 gi|118462902|ref|YP_880582.1| acyl-CoA dehydrogenase [Mycobacter... 352 6e-95 gi|254774215|ref|ZP_05215731.1| putative acyl-CoA dehydrogenase ... 352 6e-95 gi|288918151|ref|ZP_06412507.1| acyl-CoA dehydrogenase domain pr... 350 2e-94 gi|41408683|ref|NP_961519.1| FadE26_2 [Mycobacterium avium subsp... 350 2e-94 gi|256391372|ref|YP_003112936.1| acyl-CoA dehydrogenase domain-c... 349 4e-94 >gi|15610679|ref|NP_218060.1| acyl-CoA dehydrogenase FADE29 [Mycobacterium tuberculosis H37Rv] gi|31794719|ref|NP_857212.1| acyl-CoA dehydrogenase FADE29 [Mycobacterium bovis AF2122/97] gi|121639462|ref|YP_979686.1| putative acyl-CoA dehydrogenase fadE29 [Mycobacterium bovis BCG str. Pasteur 1173P2] 72 more sequence titles Length=387 Score = 795 bits (2053), Expect = 0.0, Method: Compositional matrix adjust. Identities = 387/387 (100%), Positives = 387/387 (100%), Gaps = 0/387 (0%) Query 1 MFIDLTPEQRQLQAEIRQYFSNLISPDERTEMEKDRHGPAYRAVIRRMGRDGRLGVGWPK 60 MFIDLTPEQRQLQAEIRQYFSNLISPDERTEMEKDRHGPAYRAVIRRMGRDGRLGVGWPK Sbjct 1 MFIDLTPEQRQLQAEIRQYFSNLISPDERTEMEKDRHGPAYRAVIRRMGRDGRLGVGWPK 60 Query 61 EFGGLGFGPIEQQIFVNEAHRADVPLPAVTLQTVGPTLQAHGSELQKKKFLPAILAGEAH 120 EFGGLGFGPIEQQIFVNEAHRADVPLPAVTLQTVGPTLQAHGSELQKKKFLPAILAGEAH Sbjct 61 EFGGLGFGPIEQQIFVNEAHRADVPLPAVTLQTVGPTLQAHGSELQKKKFLPAILAGEAH 120 Query 121 FAIGYTEPEAGTDLASLRTTAVRDGDHYIVNGQKVFTTGAHDADYIWLACRTDPNAAKHK 180 FAIGYTEPEAGTDLASLRTTAVRDGDHYIVNGQKVFTTGAHDADYIWLACRTDPNAAKHK Sbjct 121 FAIGYTEPEAGTDLASLRTTAVRDGDHYIVNGQKVFTTGAHDADYIWLACRTDPNAAKHK 180 Query 181 GISILIVDTKDPGYSWTPIILADGAHHTNATYYNDVRVPVDMLVGKENDGWRLITTQLNN 240 GISILIVDTKDPGYSWTPIILADGAHHTNATYYNDVRVPVDMLVGKENDGWRLITTQLNN Sbjct 181 GISILIVDTKDPGYSWTPIILADGAHHTNATYYNDVRVPVDMLVGKENDGWRLITTQLNN 240 Query 241 ERVMLGPAGRFASIYDRVHAWASVPGGNGVTPIDHDDVKRALGEIRAIWRINELLNWQVA 300 ERVMLGPAGRFASIYDRVHAWASVPGGNGVTPIDHDDVKRALGEIRAIWRINELLNWQVA Sbjct 241 ERVMLGPAGRFASIYDRVHAWASVPGGNGVTPIDHDDVKRALGEIRAIWRINELLNWQVA 300 Query 301 SAGEDINMADAAATKVFGTERVQRAGRLAEEIVGKYGNPAEPDTAELLRWLDAQTKRNLV 360 SAGEDINMADAAATKVFGTERVQRAGRLAEEIVGKYGNPAEPDTAELLRWLDAQTKRNLV Sbjct 301 SAGEDINMADAAATKVFGTERVQRAGRLAEEIVGKYGNPAEPDTAELLRWLDAQTKRNLV 360 Query 361 ITFGGGVNEVMREMIAASGLKVPRVPR 387 ITFGGGVNEVMREMIAASGLKVPRVPR Sbjct 361 ITFGGGVNEVMREMIAASGLKVPRVPR 387 >gi|15843155|ref|NP_338192.1| acyl-CoA dehydrogenase, putative [Mycobacterium tuberculosis CDC1551] gi|13883505|gb|AAK48006.1| acyl-CoA dehydrogenase, putative [Mycobacterium tuberculosis CDC1551] gi|323717737|gb|EGB26935.1| acyl-CoA dehydrogenase fadE29 [Mycobacterium tuberculosis CDC1551A] Length=387 Score = 792 bits (2045), Expect = 0.0, Method: Compositional matrix adjust. Identities = 386/387 (99%), Positives = 386/387 (99%), Gaps = 0/387 (0%) Query 1 MFIDLTPEQRQLQAEIRQYFSNLISPDERTEMEKDRHGPAYRAVIRRMGRDGRLGVGWPK 60 MFIDLTPEQRQLQAEIRQYFSNLISPDERTEMEKDRHGPAYRAVIRRMGRDGRLGVGWPK Sbjct 1 MFIDLTPEQRQLQAEIRQYFSNLISPDERTEMEKDRHGPAYRAVIRRMGRDGRLGVGWPK 60 Query 61 EFGGLGFGPIEQQIFVNEAHRADVPLPAVTLQTVGPTLQAHGSELQKKKFLPAILAGEAH 120 EFGGLGFGPIEQQIFVNEAHRADVPLPAVTLQTVGPTLQAHGSELQKKKFLPAILAGEAH Sbjct 61 EFGGLGFGPIEQQIFVNEAHRADVPLPAVTLQTVGPTLQAHGSELQKKKFLPAILAGEAH 120 Query 121 FAIGYTEPEAGTDLASLRTTAVRDGDHYIVNGQKVFTTGAHDADYIWLACRTDPNAAKHK 180 FAIGYTEPEAGTDLASLRTTAVRDGDHYIVNGQKVFTTGAHDADYIWLACRTDPNAAKHK Sbjct 121 FAIGYTEPEAGTDLASLRTTAVRDGDHYIVNGQKVFTTGAHDADYIWLACRTDPNAAKHK 180 Query 181 GISILIVDTKDPGYSWTPIILADGAHHTNATYYNDVRVPVDMLVGKENDGWRLITTQLNN 240 GISILIVDTKDPGYSWTPIILADGAHHTNATYYNDVRVPVDMLVGKENDGWRLITTQLNN Sbjct 181 GISILIVDTKDPGYSWTPIILADGAHHTNATYYNDVRVPVDMLVGKENDGWRLITTQLNN 240 Query 241 ERVMLGPAGRFASIYDRVHAWASVPGGNGVTPIDHDDVKRALGEIRAIWRINELLNWQVA 300 ERVMLGPAGRFASIYDRVHAWASVPGGNGVTPIDHDDVKRALGEIRAIWRINELLNWQVA Sbjct 241 ERVMLGPAGRFASIYDRVHAWASVPGGNGVTPIDHDDVKRALGEIRAIWRINELLNWQVA 300 Query 301 SAGEDINMADAAATKVFGTERVQRAGRLAEEIVGKYGNPAEPDTAELLRWLDAQTKRNLV 360 SAGEDINMADAAATKVFGTERVQRAGRLAE IVGKYGNPAEPDTAELLRWLDAQTKRNLV Sbjct 301 SAGEDINMADAAATKVFGTERVQRAGRLAEGIVGKYGNPAEPDTAELLRWLDAQTKRNLV 360 Query 361 ITFGGGVNEVMREMIAASGLKVPRVPR 387 ITFGGGVNEVMREMIAASGLKVPRVPR Sbjct 361 ITFGGGVNEVMREMIAASGLKVPRVPR 387 >gi|240172833|ref|ZP_04751492.1| acyl-CoA dehydrogenase FadE29 [Mycobacterium kansasii ATCC 12478] Length=387 Score = 727 bits (1877), Expect = 0.0, Method: Compositional matrix adjust. Identities = 351/387 (91%), Positives = 363/387 (94%), Gaps = 0/387 (0%) Query 1 MFIDLTPEQRQLQAEIRQYFSNLISPDERTEMEKDRHGPAYRAVIRRMGRDGRLGVGWPK 60 MFIDLTPEQR+LQ+EIRQYFSNLIS DE EMEKDRHG AYRAVIRRMGRDG LGVGWPK Sbjct 1 MFIDLTPEQRELQSEIRQYFSNLISADEAKEMEKDRHGAAYRAVIRRMGRDGMLGVGWPK 60 Query 61 EFGGLGFGPIEQQIFVNEAHRADVPLPAVTLQTVGPTLQAHGSELQKKKFLPAILAGEAH 120 EFGG GFGPIEQQIFVNEAHRADVPLPAVTLQTVGPTLQ +GSE+QK+KFLP+ILAGE H Sbjct 61 EFGGRGFGPIEQQIFVNEAHRADVPLPAVTLQTVGPTLQVYGSEMQKQKFLPSILAGEVH 120 Query 121 FAIGYTEPEAGTDLASLRTTAVRDGDHYIVNGQKVFTTGAHDADYIWLACRTDPNAAKHK 180 FAIGYTEPEAGTDLASLRTTAVR GD YIVNGQK+FTTGAHDADYIWLACRTDP A KHK Sbjct 121 FAIGYTEPEAGTDLASLRTTAVRQGDEYIVNGQKIFTTGAHDADYIWLACRTDPEAVKHK 180 Query 181 GISILIVDTKDPGYSWTPIILADGAHHTNATYYNDVRVPVDMLVGKENDGWRLITTQLNN 240 GISILIVDTKDPGYSWTPIIL+DGAHHTNATYYNDVRVPVDMLVG EN GWRLITTQLNN Sbjct 181 GISILIVDTKDPGYSWTPIILSDGAHHTNATYYNDVRVPVDMLVGAENGGWRLITTQLNN 240 Query 241 ERVMLGPAGRFASIYDRVHAWASVPGGNGVTPIDHDDVKRALGEIRAIWRINELLNWQVA 300 ERVMLGPAGRFASIYDRV AWA PG +GV IDHDDVKRALGEI A WRINELLNWQVA Sbjct 241 ERVMLGPAGRFASIYDRVRAWACKPGADGVATIDHDDVKRALGEIHATWRINELLNWQVA 300 Query 301 SAGEDINMADAAATKVFGTERVQRAGRLAEEIVGKYGNPAEPDTAELLRWLDAQTKRNLV 360 +AGEDIN+ADAAATKVFGTERVQR GRLAEEIVGKYGNPAEPDTAELL WLD+QTKRNLV Sbjct 301 AAGEDINVADAAATKVFGTERVQRIGRLAEEIVGKYGNPAEPDTAELLEWLDSQTKRNLV 360 Query 361 ITFGGGVNEVMREMIAASGLKVPRVPR 387 ITFGGGVNEVMREMIAASGLKVPRVPR Sbjct 361 ITFGGGVNEVMREMIAASGLKVPRVPR 387 >gi|183984998|ref|YP_001853289.1| acyl-CoA dehydrogenase FadE29 [Mycobacterium marinum M] gi|183178324|gb|ACC43434.1| acyl-CoA dehydrogenase FadE29 [Mycobacterium marinum M] Length=387 Score = 725 bits (1872), Expect = 0.0, Method: Compositional matrix adjust. Identities = 350/387 (91%), Positives = 365/387 (95%), Gaps = 0/387 (0%) Query 1 MFIDLTPEQRQLQAEIRQYFSNLISPDERTEMEKDRHGPAYRAVIRRMGRDGRLGVGWPK 60 MFIDLTPEQRQLQAE+RQYFSNLIS DE MEKDRH AYRAVIRRMG+DG+LGVGWPK Sbjct 1 MFIDLTPEQRQLQAELRQYFSNLISSDEMKAMEKDRHNAAYRAVIRRMGKDGKLGVGWPK 60 Query 61 EFGGLGFGPIEQQIFVNEAHRADVPLPAVTLQTVGPTLQAHGSELQKKKFLPAILAGEAH 120 EFGGLGFGPIEQQIFVNEAHRADVPLPAVTLQTVGPTLQA+GS+ QKKKFLPAILAGE H Sbjct 61 EFGGLGFGPIEQQIFVNEAHRADVPLPAVTLQTVGPTLQAYGSDAQKKKFLPAILAGEVH 120 Query 121 FAIGYTEPEAGTDLASLRTTAVRDGDHYIVNGQKVFTTGAHDADYIWLACRTDPNAAKHK 180 FAIGYTEPEAGTDLASLRTTAVR GD YIVNGQK+FTTGAHDADYIWLACRTDP A KHK Sbjct 121 FAIGYTEPEAGTDLASLRTTAVRQGDEYIVNGQKIFTTGAHDADYIWLACRTDPEAVKHK 180 Query 181 GISILIVDTKDPGYSWTPIILADGAHHTNATYYNDVRVPVDMLVGKENDGWRLITTQLNN 240 GISILIVDTKDPGYSWTPIIL+DGAHHTNATYYNDVRVP DMLVG+ N GWRLITTQLNN Sbjct 181 GISILIVDTKDPGYSWTPIILSDGAHHTNATYYNDVRVPADMLVGEPNGGWRLITTQLNN 240 Query 241 ERVMLGPAGRFASIYDRVHAWASVPGGNGVTPIDHDDVKRALGEIRAIWRINELLNWQVA 300 ERVMLGPAGRFASIYDRV AWA+ PGG+GVTPIDHDDV+RALGEI A WRINELLNWQVA Sbjct 241 ERVMLGPAGRFASIYDRVRAWAAKPGGDGVTPIDHDDVRRALGEIHATWRINELLNWQVA 300 Query 301 SAGEDINMADAAATKVFGTERVQRAGRLAEEIVGKYGNPAEPDTAELLRWLDAQTKRNLV 360 +AGE+IN+ADAAATKVFGTERVQR GRLAEEIVGKYGNPAE DTAELL WLDAQTKRNLV Sbjct 301 AAGENINVADAAATKVFGTERVQRVGRLAEEIVGKYGNPAESDTAELLEWLDAQTKRNLV 360 Query 361 ITFGGGVNEVMREMIAASGLKVPRVPR 387 ITFGGGVNEVMREMIAA+GLKVPRVPR Sbjct 361 ITFGGGVNEVMREMIAAAGLKVPRVPR 387 >gi|118619289|ref|YP_907621.1| acyl-CoA dehydrogenase FadE29 [Mycobacterium ulcerans Agy99] gi|118571399|gb|ABL06150.1| acyl-CoA dehydrogenase FadE29 [Mycobacterium ulcerans Agy99] Length=387 Score = 720 bits (1859), Expect = 0.0, Method: Compositional matrix adjust. Identities = 348/387 (90%), Positives = 363/387 (94%), Gaps = 0/387 (0%) Query 1 MFIDLTPEQRQLQAEIRQYFSNLISPDERTEMEKDRHGPAYRAVIRRMGRDGRLGVGWPK 60 MFIDLTPEQRQLQAE+RQYFSNLIS DE MEKDRH AYRAVIRRMG+DG+LGVGWPK Sbjct 1 MFIDLTPEQRQLQAELRQYFSNLISSDEMKAMEKDRHNAAYRAVIRRMGKDGKLGVGWPK 60 Query 61 EFGGLGFGPIEQQIFVNEAHRADVPLPAVTLQTVGPTLQAHGSELQKKKFLPAILAGEAH 120 EFGGLGFGPIEQQIFVNEAHRADVPLPAVTLQTVGPTLQA+GS+ QKKKFLPAILAGE H Sbjct 61 EFGGLGFGPIEQQIFVNEAHRADVPLPAVTLQTVGPTLQAYGSDAQKKKFLPAILAGEVH 120 Query 121 FAIGYTEPEAGTDLASLRTTAVRDGDHYIVNGQKVFTTGAHDADYIWLACRTDPNAAKHK 180 FAIGYTEPEAGTDLASLRTTAVR GD YIVNGQK+FTTGAHDADYIWLACRTDP A KHK Sbjct 121 FAIGYTEPEAGTDLASLRTTAVRQGDEYIVNGQKIFTTGAHDADYIWLACRTDPEAVKHK 180 Query 181 GISILIVDTKDPGYSWTPIILADGAHHTNATYYNDVRVPVDMLVGKENDGWRLITTQLNN 240 GISILIVDTKD GYSW PIIL+DGAHHTNATYYNDVRVP DMLVG+ N GWRLITTQLNN Sbjct 181 GISILIVDTKDLGYSWAPIILSDGAHHTNATYYNDVRVPADMLVGEPNGGWRLITTQLNN 240 Query 241 ERVMLGPAGRFASIYDRVHAWASVPGGNGVTPIDHDDVKRALGEIRAIWRINELLNWQVA 300 ERVMLGPAGRFASIYDRV AWA+ PGG+GVTPIDHDDV+RALGEI A WRINELLNWQVA Sbjct 241 ERVMLGPAGRFASIYDRVRAWAAKPGGDGVTPIDHDDVRRALGEIHATWRINELLNWQVA 300 Query 301 SAGEDINMADAAATKVFGTERVQRAGRLAEEIVGKYGNPAEPDTAELLRWLDAQTKRNLV 360 +AGE+IN+ADAAATKVFGTERVQR GRLAEEIVGKYGNPAE DTAELL WLDAQTKRNLV Sbjct 301 AAGENINVADAAATKVFGTERVQRVGRLAEEIVGKYGNPAESDTAELLEWLDAQTKRNLV 360 Query 361 ITFGGGVNEVMREMIAASGLKVPRVPR 387 ITFGGGVNEVMREMIAA+GLKVPRVPR Sbjct 361 ITFGGGVNEVMREMIAAAGLKVPRVPR 387 >gi|254822625|ref|ZP_05227626.1| putative acyl-CoA dehydrogenase [Mycobacterium intracellulare ATCC 13950] Length=387 Score = 712 bits (1837), Expect = 0.0, Method: Compositional matrix adjust. Identities = 342/387 (89%), Positives = 361/387 (94%), Gaps = 0/387 (0%) Query 1 MFIDLTPEQRQLQAEIRQYFSNLISPDERTEMEKDRHGPAYRAVIRRMGRDGRLGVGWPK 60 MFIDLTPEQRQLQAE+R+YFSNLIS DE ME+DRH AYRAVIRRMG+DG+LGVGWPK Sbjct 1 MFIDLTPEQRQLQAELREYFSNLISSDEMKAMEQDRHNEAYRAVIRRMGQDGKLGVGWPK 60 Query 61 EFGGLGFGPIEQQIFVNEAHRADVPLPAVTLQTVGPTLQAHGSELQKKKFLPAILAGEAH 120 EFGGLGFGPIEQ IFVNEAHRADVPLPAVTLQTVGPTLQ GSE+QKKKFLPAILAGE H Sbjct 61 EFGGLGFGPIEQSIFVNEAHRADVPLPAVTLQTVGPTLQQFGSEMQKKKFLPAILAGEVH 120 Query 121 FAIGYTEPEAGTDLASLRTTAVRDGDHYIVNGQKVFTTGAHDADYIWLACRTDPNAAKHK 180 FAIGYTEPEAGTDLASLRTTAVR GD YIVNGQKVFTTGAHDADYIWLACRTDP A KHK Sbjct 121 FAIGYTEPEAGTDLASLRTTAVRHGDEYIVNGQKVFTTGAHDADYIWLACRTDPEAVKHK 180 Query 181 GISILIVDTKDPGYSWTPIILADGAHHTNATYYNDVRVPVDMLVGKENDGWRLITTQLNN 240 GISILIVDTKDPGYSWTPIIL+DGAHHTNATYYNDVRVP DMLVG+EN GWRLITTQLNN Sbjct 181 GISILIVDTKDPGYSWTPIILSDGAHHTNATYYNDVRVPADMLVGEENGGWRLITTQLNN 240 Query 241 ERVMLGPAGRFASIYDRVHAWASVPGGNGVTPIDHDDVKRALGEIRAIWRINELLNWQVA 300 ERVMLGPAGR A IYDRVHAWAS PG +GVTPIDH DVKRALGEI A+WRINELLNWQVA Sbjct 241 ERVMLGPAGRTAGIYDRVHAWASKPGSDGVTPIDHADVKRALGEIHAMWRINELLNWQVA 300 Query 301 SAGEDINMADAAATKVFGTERVQRAGRLAEEIVGKYGNPAEPDTAELLRWLDAQTKRNLV 360 +AGEDIN+ADAA+TKVFGTE++Q GRLAEEIVGKYGNPA+ DTA+LL WLD+QTKRNLV Sbjct 301 AAGEDINVADAASTKVFGTEKIQYIGRLAEEIVGKYGNPADSDTADLLNWLDSQTKRNLV 360 Query 361 ITFGGGVNEVMREMIAASGLKVPRVPR 387 ITFGGGVNEVMREMIAA+GLKVPRVPR Sbjct 361 ITFGGGVNEVMREMIAAAGLKVPRVPR 387 >gi|342862369|ref|ZP_08719009.1| acyl-CoA dehydrogenase [Mycobacterium colombiense CECT 3035] gi|342130040|gb|EGT83374.1| acyl-CoA dehydrogenase [Mycobacterium colombiense CECT 3035] Length=387 Score = 709 bits (1830), Expect = 0.0, Method: Compositional matrix adjust. Identities = 341/387 (89%), Positives = 359/387 (93%), Gaps = 0/387 (0%) Query 1 MFIDLTPEQRQLQAEIRQYFSNLISPDERTEMEKDRHGPAYRAVIRRMGRDGRLGVGWPK 60 MFIDLTPEQRQLQAE+R+YFSNLIS DE ME+DRH AYRAVIRRMGRDG+LGVGWPK Sbjct 1 MFIDLTPEQRQLQAELREYFSNLISSDEMKAMEQDRHNEAYRAVIRRMGRDGKLGVGWPK 60 Query 61 EFGGLGFGPIEQQIFVNEAHRADVPLPAVTLQTVGPTLQAHGSELQKKKFLPAILAGEAH 120 EFGGLGFGPIEQ IFVNEAHRADVPLPAVTLQTVGP LQ GS+ QKKKFLPAILAGE H Sbjct 61 EFGGLGFGPIEQSIFVNEAHRADVPLPAVTLQTVGPVLQQFGSDEQKKKFLPAILAGEVH 120 Query 121 FAIGYTEPEAGTDLASLRTTAVRDGDHYIVNGQKVFTTGAHDADYIWLACRTDPNAAKHK 180 FAIGYTEPEAGTDLASLRTTAVR GD YIVNGQK+FTTGAHDADYIWLACRTDP A KHK Sbjct 121 FAIGYTEPEAGTDLASLRTTAVRQGDEYIVNGQKIFTTGAHDADYIWLACRTDPEAVKHK 180 Query 181 GISILIVDTKDPGYSWTPIILADGAHHTNATYYNDVRVPVDMLVGKENDGWRLITTQLNN 240 GISILIVDTKDPGYSWTPIIL+DGAHHTNATYYNDVRVP DMLVG+EN GWRLITTQLNN Sbjct 181 GISILIVDTKDPGYSWTPIILSDGAHHTNATYYNDVRVPADMLVGEENGGWRLITTQLNN 240 Query 241 ERVMLGPAGRFASIYDRVHAWASVPGGNGVTPIDHDDVKRALGEIRAIWRINELLNWQVA 300 ERVMLGPAGR A IYDRVHAWAS PG +GVTPIDH DVKRALGEI A+WRINELLNWQVA Sbjct 241 ERVMLGPAGRTAGIYDRVHAWASKPGSDGVTPIDHQDVKRALGEIHAMWRINELLNWQVA 300 Query 301 SAGEDINMADAAATKVFGTERVQRAGRLAEEIVGKYGNPAEPDTAELLRWLDAQTKRNLV 360 +AGEDIN+ADAA+TKVFGTER+Q GRLAEEIVGKYGNPA+ DTA+LL WLD+QTKRNLV Sbjct 301 AAGEDINVADAASTKVFGTERIQYIGRLAEEIVGKYGNPADSDTADLLNWLDSQTKRNLV 360 Query 361 ITFGGGVNEVMREMIAASGLKVPRVPR 387 ITFGGGVNEVMREMIAASGL+VPRVPR Sbjct 361 ITFGGGVNEVMREMIAASGLQVPRVPR 387 >gi|41406622|ref|NP_959458.1| FadE29 [Mycobacterium avium subsp. paratuberculosis K-10] gi|118463230|ref|YP_879898.1| acyl-CoA dehydrogenase [Mycobacterium avium 104] gi|41394971|gb|AAS02841.1| FadE29 [Mycobacterium avium subsp. paratuberculosis K-10] gi|118164517|gb|ABK65414.1| putative acyl-CoA dehydrogenase [Mycobacterium avium 104] gi|336458412|gb|EGO37386.1| acyl-CoA dehydrogenase [Mycobacterium avium subsp. paratuberculosis S397] Length=387 Score = 709 bits (1829), Expect = 0.0, Method: Compositional matrix adjust. Identities = 339/387 (88%), Positives = 360/387 (94%), Gaps = 0/387 (0%) Query 1 MFIDLTPEQRQLQAEIRQYFSNLISPDERTEMEKDRHGPAYRAVIRRMGRDGRLGVGWPK 60 MFIDLTPEQRQLQAE+R+YFSNLIS DE ME+DRH AYRAVIRRMGRDG+LGVGWPK Sbjct 1 MFIDLTPEQRQLQAELREYFSNLISSDEMKAMEQDRHNEAYRAVIRRMGRDGKLGVGWPK 60 Query 61 EFGGLGFGPIEQQIFVNEAHRADVPLPAVTLQTVGPTLQAHGSELQKKKFLPAILAGEAH 120 EFGGLGFGPIEQ IFVNEAHRADVPLPAVTLQTVGPTLQ GSE+QKKKFLPAILAGE H Sbjct 61 EFGGLGFGPIEQSIFVNEAHRADVPLPAVTLQTVGPTLQQFGSEMQKKKFLPAILAGEVH 120 Query 121 FAIGYTEPEAGTDLASLRTTAVRDGDHYIVNGQKVFTTGAHDADYIWLACRTDPNAAKHK 180 FAIGYTEPEAGTDLASLRTTAVR GD YIVNGQK+FTTGAHDADYIWLACRTDP A KHK Sbjct 121 FAIGYTEPEAGTDLASLRTTAVRQGDEYIVNGQKIFTTGAHDADYIWLACRTDPEAVKHK 180 Query 181 GISILIVDTKDPGYSWTPIILADGAHHTNATYYNDVRVPVDMLVGKENDGWRLITTQLNN 240 GISILIVDTKDPGYSWTPIIL+DGAHHTNATYYNDVRVP DMLVG+EN GW+LITTQLNN Sbjct 181 GISILIVDTKDPGYSWTPIILSDGAHHTNATYYNDVRVPADMLVGEENGGWKLITTQLNN 240 Query 241 ERVMLGPAGRFASIYDRVHAWASVPGGNGVTPIDHDDVKRALGEIRAIWRINELLNWQVA 300 ERVMLGPAGR A IYDRV WAS PG +GVTPIDH DV+RALGEI A+WRINELLNWQVA Sbjct 241 ERVMLGPAGRTAGIYDRVREWASKPGSDGVTPIDHADVQRALGEIYAMWRINELLNWQVA 300 Query 301 SAGEDINMADAAATKVFGTERVQRAGRLAEEIVGKYGNPAEPDTAELLRWLDAQTKRNLV 360 +AGEDIN+ADAA+TKVFGTER+Q GRLAEE+VGKYGNPA+P+T ELLRWLD+QTKRNLV Sbjct 301 AAGEDINVADAASTKVFGTERIQYIGRLAEEVVGKYGNPADPETGELLRWLDSQTKRNLV 360 Query 361 ITFGGGVNEVMREMIAASGLKVPRVPR 387 ITFGGGVNEVMREMIAA+GLKVPRVPR Sbjct 361 ITFGGGVNEVMREMIAAAGLKVPRVPR 387 >gi|254773575|ref|ZP_05215091.1| putative acyl-CoA dehydrogenase [Mycobacterium avium subsp. avium ATCC 25291] Length=387 Score = 708 bits (1827), Expect = 0.0, Method: Compositional matrix adjust. Identities = 338/387 (88%), Positives = 360/387 (94%), Gaps = 0/387 (0%) Query 1 MFIDLTPEQRQLQAEIRQYFSNLISPDERTEMEKDRHGPAYRAVIRRMGRDGRLGVGWPK 60 MFIDLTPEQRQLQAE+R+YFSNLIS DE ME+DRH AYRAVIRRMGRDG+LGVGWPK Sbjct 1 MFIDLTPEQRQLQAELREYFSNLISSDEMKAMEQDRHNEAYRAVIRRMGRDGKLGVGWPK 60 Query 61 EFGGLGFGPIEQQIFVNEAHRADVPLPAVTLQTVGPTLQAHGSELQKKKFLPAILAGEAH 120 EFGGLGFGPIEQ IFVNEAHRADVPLPAVTLQTVGPTLQ GSE+QKKKFLPAILAGE H Sbjct 61 EFGGLGFGPIEQSIFVNEAHRADVPLPAVTLQTVGPTLQQFGSEMQKKKFLPAILAGEVH 120 Query 121 FAIGYTEPEAGTDLASLRTTAVRDGDHYIVNGQKVFTTGAHDADYIWLACRTDPNAAKHK 180 FAIGYTEPEAGTDLAS+RTTAVR GD YIVNGQK+FTTGAHDADYIWLACRTDP A KHK Sbjct 121 FAIGYTEPEAGTDLASVRTTAVRQGDEYIVNGQKIFTTGAHDADYIWLACRTDPEAVKHK 180 Query 181 GISILIVDTKDPGYSWTPIILADGAHHTNATYYNDVRVPVDMLVGKENDGWRLITTQLNN 240 GISILIVDTKDPGYSWTPIIL+DGAHHTNATYYNDVRVP DMLVG+EN GW+LITTQLNN Sbjct 181 GISILIVDTKDPGYSWTPIILSDGAHHTNATYYNDVRVPADMLVGEENGGWKLITTQLNN 240 Query 241 ERVMLGPAGRFASIYDRVHAWASVPGGNGVTPIDHDDVKRALGEIRAIWRINELLNWQVA 300 ERVMLGPAGR A IYDRV WAS PG +GVTPIDH DV+RALGEI A+WRINELLNWQVA Sbjct 241 ERVMLGPAGRTAGIYDRVREWASKPGSDGVTPIDHADVQRALGEIYAMWRINELLNWQVA 300 Query 301 SAGEDINMADAAATKVFGTERVQRAGRLAEEIVGKYGNPAEPDTAELLRWLDAQTKRNLV 360 +AGEDIN+ADAA+TKVFGTER+Q GRLAEE+VGKYGNPA+P+T ELLRWLD+QTKRNLV Sbjct 301 AAGEDINVADAASTKVFGTERIQYIGRLAEEVVGKYGNPADPETGELLRWLDSQTKRNLV 360 Query 361 ITFGGGVNEVMREMIAASGLKVPRVPR 387 ITFGGGVNEVMREMIAA+GLKVPRVPR Sbjct 361 ITFGGGVNEVMREMIAAAGLKVPRVPR 387 >gi|296166572|ref|ZP_06849002.1| acyl-CoA dehydrogenase [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295898058|gb|EFG77634.1| acyl-CoA dehydrogenase [Mycobacterium parascrofulaceum ATCC BAA-614] Length=387 Score = 701 bits (1808), Expect = 0.0, Method: Compositional matrix adjust. Identities = 337/387 (88%), Positives = 358/387 (93%), Gaps = 0/387 (0%) Query 1 MFIDLTPEQRQLQAEIRQYFSNLISPDERTEMEKDRHGPAYRAVIRRMGRDGRLGVGWPK 60 MFIDLTPEQRQLQAE+R+YFSNLIS DE ME+DRH AYRAVIRRMGRD +LGVGWPK Sbjct 1 MFIDLTPEQRQLQAELREYFSNLISSDEMKAMEQDRHNEAYRAVIRRMGRDRKLGVGWPK 60 Query 61 EFGGLGFGPIEQQIFVNEAHRADVPLPAVTLQTVGPTLQAHGSELQKKKFLPAILAGEAH 120 EFGGLGFGPIEQ IFVNEAHRADVPLPAVTLQTVGPTLQ G+E QKKKFLPAILAGE H Sbjct 61 EFGGLGFGPIEQSIFVNEAHRADVPLPAVTLQTVGPTLQQFGTEAQKKKFLPAILAGEVH 120 Query 121 FAIGYTEPEAGTDLASLRTTAVRDGDHYIVNGQKVFTTGAHDADYIWLACRTDPNAAKHK 180 FAIGY+EPEAGTDLASLRTTAVR GD YIVNGQK++TTG HDADYIWLACRTDP A KHK Sbjct 121 FAIGYSEPEAGTDLASLRTTAVRHGDEYIVNGQKMWTTGGHDADYIWLACRTDPEAVKHK 180 Query 181 GISILIVDTKDPGYSWTPIILADGAHHTNATYYNDVRVPVDMLVGKENDGWRLITTQLNN 240 GISILIVDTKDPG+SWTP+IL+DGAHHTNATYYNDVRVP DMLVG+EN GW+LITTQLNN Sbjct 181 GISILIVDTKDPGFSWTPVILSDGAHHTNATYYNDVRVPADMLVGEENGGWKLITTQLNN 240 Query 241 ERVMLGPAGRFASIYDRVHAWASVPGGNGVTPIDHDDVKRALGEIRAIWRINELLNWQVA 300 ERVMLGPAGR A IYDRV AWAS PG +GVTPIDH DVKRALGEI A+WRINELLNWQVA Sbjct 241 ERVMLGPAGRTAGIYDRVRAWASKPGADGVTPIDHPDVKRALGEIHAMWRINELLNWQVA 300 Query 301 SAGEDINMADAAATKVFGTERVQRAGRLAEEIVGKYGNPAEPDTAELLRWLDAQTKRNLV 360 +AGEDINMADAA+TKVFGTER+Q GRLAEEIVGKYGNPAEPDTA+LL WLD+QTKRNLV Sbjct 301 AAGEDINMADAASTKVFGTERIQYIGRLAEEIVGKYGNPAEPDTADLLNWLDSQTKRNLV 360 Query 361 ITFGGGVNEVMREMIAASGLKVPRVPR 387 ITFGGGVNEVMREMIAA+GLKVPRVPR Sbjct 361 ITFGGGVNEVMREMIAAAGLKVPRVPR 387 >gi|333992330|ref|YP_004524944.1| acyl-CoA dehydrogenase [Mycobacterium sp. JDM601] gi|333488298|gb|AEF37690.1| acyl-CoA dehydrogenase FadE29 [Mycobacterium sp. JDM601] Length=387 Score = 694 bits (1792), Expect = 0.0, Method: Compositional matrix adjust. Identities = 333/387 (87%), Positives = 357/387 (93%), Gaps = 0/387 (0%) Query 1 MFIDLTPEQRQLQAEIRQYFSNLISPDERTEMEKDRHGPAYRAVIRRMGRDGRLGVGWPK 60 MF+DLTPEQR+LQAE+R+YF+NLI+PDE M DRH AYR VIRRMGRDG+LGVGWPK Sbjct 1 MFVDLTPEQRKLQAELREYFANLITPDEEKAMASDRHNQAYRDVIRRMGRDGKLGVGWPK 60 Query 61 EFGGLGFGPIEQQIFVNEAHRADVPLPAVTLQTVGPTLQAHGSELQKKKFLPAILAGEAH 120 EFGGLGFGPIEQQIFVNEA RAD+PLPAVTLQTVGPTLQ +G+E QKKKFLPAILAGE H Sbjct 61 EFGGLGFGPIEQQIFVNEAQRADIPLPAVTLQTVGPTLQVYGNEAQKKKFLPAILAGEVH 120 Query 121 FAIGYTEPEAGTDLASLRTTAVRDGDHYIVNGQKVFTTGAHDADYIWLACRTDPNAAKHK 180 FAIGYTEPEAGTDLASLRTTAVRDGDHYIVNGQKVFTTGAHDADYIWLA RTDP A KHK Sbjct 121 FAIGYTEPEAGTDLASLRTTAVRDGDHYIVNGQKVFTTGAHDADYIWLAVRTDPTAVKHK 180 Query 181 GISILIVDTKDPGYSWTPIILADGAHHTNATYYNDVRVPVDMLVGKENDGWRLITTQLNN 240 GISILIVDTKDPGYSWTP+IL+DGAHHTNATYYNDVRVPVDMLVG+EN GWRLITTQLNN Sbjct 181 GISILIVDTKDPGYSWTPMILSDGAHHTNATYYNDVRVPVDMLVGEENGGWRLITTQLNN 240 Query 241 ERVMLGPAGRFASIYDRVHAWASVPGGNGVTPIDHDDVKRALGEIRAIWRINELLNWQVA 300 ERVMLGPAGRF +IYD+VHAWA PG +GVTPI HD VKR LGEI A++RINELLNWQVA Sbjct 241 ERVMLGPAGRFGAIYDKVHAWAIKPGSDGVTPISHDAVKRGLGEIHAMFRINELLNWQVA 300 Query 301 SAGEDINMADAAATKVFGTERVQRAGRLAEEIVGKYGNPAEPDTAELLRWLDAQTKRNLV 360 +AGE I++ADAAATKVFGTER+Q AGRLAEE+VG YGNPA+ TAELLRWLD QTKRNLV Sbjct 301 AAGEIIDVADAAATKVFGTERIQYAGRLAEELVGCYGNPADAATAELLRWLDVQTKRNLV 360 Query 361 ITFGGGVNEVMREMIAASGLKVPRVPR 387 ITFGGGVNEVMREMIAASGLKVPRVPR Sbjct 361 ITFGGGVNEVMREMIAASGLKVPRVPR 387 >gi|126437624|ref|YP_001073315.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium sp. JLS] gi|126237424|gb|ABO00825.1| acyl-CoA dehydrogenase domain protein [Mycobacterium sp. JLS] Length=387 Score = 691 bits (1784), Expect = 0.0, Method: Compositional matrix adjust. Identities = 330/387 (86%), Positives = 359/387 (93%), Gaps = 0/387 (0%) Query 1 MFIDLTPEQRQLQAEIRQYFSNLISPDERTEMEKDRHGPAYRAVIRRMGRDGRLGVGWPK 60 MFIDLTPEQR+LQAE+R+YFS LISP+ER ME DRH AYRAVI+RMG DG+LGVGWPK Sbjct 1 MFIDLTPEQRRLQAELREYFSTLISPEERDAMETDRHNEAYRAVIKRMGADGKLGVGWPK 60 Query 61 EFGGLGFGPIEQQIFVNEAHRADVPLPAVTLQTVGPTLQAHGSELQKKKFLPAILAGEAH 120 EFGGLGFGP+EQ IFVNEA RADVPLPAVTLQTVGPTLQ +G+E QKKKFLPAILAGE H Sbjct 61 EFGGLGFGPVEQSIFVNEAARADVPLPAVTLQTVGPTLQVYGTEAQKKKFLPAILAGEVH 120 Query 121 FAIGYTEPEAGTDLASLRTTAVRDGDHYIVNGQKVFTTGAHDADYIWLACRTDPNAAKHK 180 FAIGY+EPEAGTDLASLRT+AVR GD YIVNGQK++TTGAHDADYIWLA RTDP AAKHK Sbjct 121 FAIGYSEPEAGTDLASLRTSAVRHGDEYIVNGQKMWTTGAHDADYIWLAARTDPEAAKHK 180 Query 181 GISILIVDTKDPGYSWTPIILADGAHHTNATYYNDVRVPVDMLVGKENDGWRLITTQLNN 240 GISILIVDTKDPGYSWTPIIL+DGAHHTNA+YYNDV VP DMLVG+EN GW+LITTQLN+ Sbjct 181 GISILIVDTKDPGYSWTPIILSDGAHHTNASYYNDVHVPADMLVGEENAGWKLITTQLNH 240 Query 241 ERVMLGPAGRFASIYDRVHAWASVPGGNGVTPIDHDDVKRALGEIRAIWRINELLNWQVA 300 ERVMLGPAG+ A IYDRVHAWAS PG NGVTP+++D+V+RALGEIRA+WRINELLNWQVA Sbjct 241 ERVMLGPAGKVAGIYDRVHAWASKPGSNGVTPLENDNVRRALGEIRAVWRINELLNWQVA 300 Query 301 SAGEDINMADAAATKVFGTERVQRAGRLAEEIVGKYGNPAEPDTAELLRWLDAQTKRNLV 360 +AGE I +ADAAATKVF TER+QR GRLAEEIVG YGNPAEPDTAELLRWLD+QTKRNLV Sbjct 301 AAGETIAVADAAATKVFSTERIQRIGRLAEEIVGAYGNPAEPDTAELLRWLDSQTKRNLV 360 Query 361 ITFGGGVNEVMREMIAASGLKVPRVPR 387 ITFGGGVNEVMREMIAASGLKVPRVPR Sbjct 361 ITFGGGVNEVMREMIAASGLKVPRVPR 387 >gi|108801638|ref|YP_641835.1| acyl-CoA dehydrogenase-like protein [Mycobacterium sp. MCS] gi|119870789|ref|YP_940741.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium sp. KMS] gi|108772057|gb|ABG10779.1| acyl-CoA dehydrogenase-like protein [Mycobacterium sp. MCS] gi|119696878|gb|ABL93951.1| acyl-CoA dehydrogenase domain protein [Mycobacterium sp. KMS] Length=387 Score = 690 bits (1780), Expect = 0.0, Method: Compositional matrix adjust. Identities = 330/387 (86%), Positives = 358/387 (93%), Gaps = 0/387 (0%) Query 1 MFIDLTPEQRQLQAEIRQYFSNLISPDERTEMEKDRHGPAYRAVIRRMGRDGRLGVGWPK 60 MFIDLTPEQR+LQAE+R+YFS LISP ER ME DRH AYRAVI+RMG DG+LGVGWPK Sbjct 1 MFIDLTPEQRRLQAELREYFSTLISPGERDAMETDRHNEAYRAVIKRMGADGKLGVGWPK 60 Query 61 EFGGLGFGPIEQQIFVNEAHRADVPLPAVTLQTVGPTLQAHGSELQKKKFLPAILAGEAH 120 EFGGLGFGP+EQ IFVNEA RADVPLPAVTLQTVGPTLQ +G+E QKKKFLPAILAGE H Sbjct 61 EFGGLGFGPVEQSIFVNEAARADVPLPAVTLQTVGPTLQVYGTEAQKKKFLPAILAGEVH 120 Query 121 FAIGYTEPEAGTDLASLRTTAVRDGDHYIVNGQKVFTTGAHDADYIWLACRTDPNAAKHK 180 FAIGY+EPEAGTDLASLRT+AVR GD YIVNGQK++TTGAHDADYIWLA RTDP AAKHK Sbjct 121 FAIGYSEPEAGTDLASLRTSAVRHGDEYIVNGQKMWTTGAHDADYIWLAARTDPEAAKHK 180 Query 181 GISILIVDTKDPGYSWTPIILADGAHHTNATYYNDVRVPVDMLVGKENDGWRLITTQLNN 240 GISILIVDTKDPGYSWTPIIL+DGAHHTNA+YYNDV VP DMLVG+EN GW+LITTQLN+ Sbjct 181 GISILIVDTKDPGYSWTPIILSDGAHHTNASYYNDVHVPADMLVGEENAGWKLITTQLNH 240 Query 241 ERVMLGPAGRFASIYDRVHAWASVPGGNGVTPIDHDDVKRALGEIRAIWRINELLNWQVA 300 ERVMLGPAG+ A IYDRVHAWAS PG NGVTP+++D+V+RALGEIRA+WRINELLNWQVA Sbjct 241 ERVMLGPAGKVAGIYDRVHAWASKPGSNGVTPLENDNVRRALGEIRAVWRINELLNWQVA 300 Query 301 SAGEDINMADAAATKVFGTERVQRAGRLAEEIVGKYGNPAEPDTAELLRWLDAQTKRNLV 360 +AGE I +ADAAATKVF TER+QR GRLAEEIVG YGNPAEPDTAELLRWLD+QTKRNLV Sbjct 301 AAGETIAVADAAATKVFSTERIQRIGRLAEEIVGAYGNPAEPDTAELLRWLDSQTKRNLV 360 Query 361 ITFGGGVNEVMREMIAASGLKVPRVPR 387 ITFGGGVNEVMREMIAASGLKVPRVPR Sbjct 361 ITFGGGVNEVMREMIAASGLKVPRVPR 387 >gi|120406204|ref|YP_956033.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium vanbaalenii PYR-1] gi|119959022|gb|ABM16027.1| acyl-CoA dehydrogenase domain protein [Mycobacterium vanbaalenii PYR-1] Length=387 Score = 675 bits (1741), Expect = 0.0, Method: Compositional matrix adjust. Identities = 319/387 (83%), Positives = 354/387 (92%), Gaps = 0/387 (0%) Query 1 MFIDLTPEQRQLQAEIRQYFSNLISPDERTEMEKDRHGPAYRAVIRRMGRDGRLGVGWPK 60 M+IDLTPEQRQLQAE+RQYFS LI+PDE ME DRH AYRAVI+RMG DG+LGVGWPK Sbjct 1 MYIDLTPEQRQLQAELRQYFSTLITPDEAAAMETDRHNEAYRAVIKRMGSDGKLGVGWPK 60 Query 61 EFGGLGFGPIEQQIFVNEAHRADVPLPAVTLQTVGPTLQAHGSELQKKKFLPAILAGEAH 120 E+GGLGFGP+EQQIFVNEA+RADVPLP VTLQTVGPTLQ +G+E QKKKFLP IL+G+ H Sbjct 61 EYGGLGFGPVEQQIFVNEANRADVPLPLVTLQTVGPTLQVYGTEEQKKKFLPGILSGDIH 120 Query 121 FAIGYTEPEAGTDLASLRTTAVRDGDHYIVNGQKVFTTGAHDADYIWLACRTDPNAAKHK 180 FAIGY+EP+AGTDLASLRTTAV+ GD YIVNGQK++TTGAHDADYIWLACRTDP AAKHK Sbjct 121 FAIGYSEPDAGTDLASLRTTAVKHGDEYIVNGQKMWTTGAHDADYIWLACRTDPEAAKHK 180 Query 181 GISILIVDTKDPGYSWTPIILADGAHHTNATYYNDVRVPVDMLVGKENDGWRLITTQLNN 240 GISILIVDTKDPGYSWTPIIL+DGAHHTNA+YYNDVRVP DMLVG+EN GW+LITTQLN+ Sbjct 181 GISILIVDTKDPGYSWTPIILSDGAHHTNASYYNDVRVPADMLVGEENGGWKLITTQLNH 240 Query 241 ERVMLGPAGRFASIYDRVHAWASVPGGNGVTPIDHDDVKRALGEIRAIWRINELLNWQVA 300 ERV LGPAGR A IYD+VHAWAS PG +GVTP++HDDVKR LG+I+AIWR+NELLNWQVA Sbjct 241 ERVGLGPAGRVAGIYDQVHAWASKPGSDGVTPVEHDDVKRLLGQIKAIWRVNELLNWQVA 300 Query 301 SAGEDINMADAAATKVFGTERVQRAGRLAEEIVGKYGNPAEPDTAELLRWLDAQTKRNLV 360 ++GE I +ADAAATKVF TER+Q GRLAEEIVG YGNPA+P+TAELL WLD TKRNLV Sbjct 301 ASGETIAVADAAATKVFSTERIQEVGRLAEEIVGGYGNPADPETAELLDWLDKMTKRNLV 360 Query 361 ITFGGGVNEVMREMIAASGLKVPRVPR 387 ITFGGGVNEVMREMIAASGLKVPRVPR Sbjct 361 ITFGGGVNEVMREMIAASGLKVPRVPR 387 >gi|145222102|ref|YP_001132780.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium gilvum PYR-GCK] gi|315442542|ref|YP_004075421.1| acyl-CoA dehydrogenase [Mycobacterium sp. Spyr1] gi|145214588|gb|ABP43992.1| acyl-CoA dehydrogenase domain protein [Mycobacterium gilvum PYR-GCK] gi|315260845|gb|ADT97586.1| acyl-CoA dehydrogenase [Mycobacterium sp. Spyr1] Length=387 Score = 652 bits (1682), Expect = 0.0, Method: Compositional matrix adjust. Identities = 307/387 (80%), Positives = 345/387 (90%), Gaps = 0/387 (0%) Query 1 MFIDLTPEQRQLQAEIRQYFSNLISPDERTEMEKDRHGPAYRAVIRRMGRDGRLGVGWPK 60 M+I+LTPEQR LQAE+R+YF+ LI+P+E M+ DRH AYRAVI+RMG DG+LGVGWPK Sbjct 1 MYIELTPEQRSLQAELREYFTTLITPEEAEAMKSDRHNEAYRAVIKRMGSDGKLGVGWPK 60 Query 61 EFGGLGFGPIEQQIFVNEAHRADVPLPAVTLQTVGPTLQAHGSELQKKKFLPAILAGEAH 120 E+GGLGFGPIEQQIFVNEA+RADVPLP VTLQTVGPTLQ HG+E QKKKFLP IL+GE H Sbjct 61 EYGGLGFGPIEQQIFVNEANRADVPLPMVTLQTVGPTLQVHGTEEQKKKFLPGILSGEVH 120 Query 121 FAIGYTEPEAGTDLASLRTTAVRDGDHYIVNGQKVFTTGAHDADYIWLACRTDPNAAKHK 180 FAIGY+EPEAGTDLASLRTTAVR GD Y+VNGQK++TTGAHDADYIWLACRTDP AAKHK Sbjct 121 FAIGYSEPEAGTDLASLRTTAVRHGDEYVVNGQKMWTTGAHDADYIWLACRTDPEAAKHK 180 Query 181 GISILIVDTKDPGYSWTPIILADGAHHTNATYYNDVRVPVDMLVGKENDGWRLITTQLNN 240 GISILIVDTKDPGYSWTPIIL+DGAHHTNA+YYNDVRVP DMLVG+EN GW+LITTQLN+ Sbjct 181 GISILIVDTKDPGYSWTPIILSDGAHHTNASYYNDVRVPADMLVGEENGGWKLITTQLNH 240 Query 241 ERVMLGPAGRFASIYDRVHAWASVPGGNGVTPIDHDDVKRALGEIRAIWRINELLNWQVA 300 ERV LGPAGR A IYD V WA+ PG +GV PI+ + +R LG+I+AIWRINELLNWQVA Sbjct 241 ERVGLGPAGRVAGIYDEVREWATTPGSHGVVPIEQEGARRLLGQIKAIWRINELLNWQVA 300 Query 301 SAGEDINMADAAATKVFGTERVQRAGRLAEEIVGKYGNPAEPDTAELLRWLDAQTKRNLV 360 ++GE I +ADAAATKVF TER+Q GRLAEE+VG+YGNPA+ T+ELL WLD TKRNLV Sbjct 301 ASGETIAVADAAATKVFSTERIQEVGRLAEELVGRYGNPADAHTSELLDWLDKMTKRNLV 360 Query 361 ITFGGGVNEVMREMIAASGLKVPRVPR 387 ITFGGGVNEVMREMIAASGLKVPRVPR Sbjct 361 ITFGGGVNEVMREMIAASGLKVPRVPR 387 >gi|118471380|ref|YP_890219.1| acyl-CoA dehydrogenase [Mycobacterium smegmatis str. MC2 155] gi|118172667|gb|ABK73563.1| putative acyl-CoA dehydrogenase [Mycobacterium smegmatis str. MC2 155] Length=387 Score = 647 bits (1668), Expect = 0.0, Method: Compositional matrix adjust. Identities = 300/387 (78%), Positives = 347/387 (90%), Gaps = 0/387 (0%) Query 1 MFIDLTPEQRQLQAEIRQYFSNLISPDERTEMEKDRHGPAYRAVIRRMGRDGRLGVGWPK 60 MFIDLTPEQR+LQ+E+R+YFS L++P+E ME DRH AYRAVI+RMG DG+LGVGWPK Sbjct 1 MFIDLTPEQRKLQSELREYFSTLLTPEEAAAMETDRHNEAYRAVIKRMGADGKLGVGWPK 60 Query 61 EFGGLGFGPIEQQIFVNEAHRADVPLPAVTLQTVGPTLQAHGSELQKKKFLPAILAGEAH 120 E+GGLG+GP+EQQIF+NEA+RAD+PLP VTLQTVGPTLQ +G+E QKKKFLP IL+G+ H Sbjct 61 EYGGLGYGPVEQQIFINEANRADIPLPMVTLQTVGPTLQVYGTEEQKKKFLPGILSGDVH 120 Query 121 FAIGYTEPEAGTDLASLRTTAVRDGDHYIVNGQKVFTTGAHDADYIWLACRTDPNAAKHK 180 FAIGY+EPEAGTDLASLRTTA+R GD YIVNGQK++TTGAHDADYIWLACRTDP A KHK Sbjct 121 FAIGYSEPEAGTDLASLRTTAIRHGDEYIVNGQKMWTTGAHDADYIWLACRTDPEAPKHK 180 Query 181 GISILIVDTKDPGYSWTPIILADGAHHTNATYYNDVRVPVDMLVGKENDGWRLITTQLNN 240 GISILIVDTKDPGYSWTPIIL+DGAHHTNA+YYNDV VP DMLVG+EN GW+LITTQLN+ Sbjct 181 GISILIVDTKDPGYSWTPIILSDGAHHTNASYYNDVHVPADMLVGEENGGWKLITTQLNH 240 Query 241 ERVMLGPAGRFASIYDRVHAWASVPGGNGVTPIDHDDVKRALGEIRAIWRINELLNWQVA 300 ERV LGPAGR A IYD+VH WAS PG +GVTPI+H + +R LG+I+AIWRINELLNWQVA Sbjct 241 ERVGLGPAGRVAGIYDQVHKWASTPGSDGVTPIEHPEAQRLLGQIKAIWRINELLNWQVA 300 Query 301 SAGEDINMADAAATKVFGTERVQRAGRLAEEIVGKYGNPAEPDTAELLRWLDAQTKRNLV 360 ++GE I +ADAAATKVF TER+Q GRLAEE++ ++GNPA+ TA+L+ W+D TKRNLV Sbjct 301 ASGETIAVADAAATKVFSTERIQEVGRLAEEVIARFGNPADRHTADLMVWIDKMTKRNLV 360 Query 361 ITFGGGVNEVMREMIAASGLKVPRVPR 387 ITFGGGVNEVMREMIAASGLKVPRVPR Sbjct 361 ITFGGGVNEVMREMIAASGLKVPRVPR 387 >gi|169627718|ref|YP_001701367.1| putative acyl-CoA dehydrogenase [Mycobacterium abscessus ATCC 19977] gi|169239685|emb|CAM60713.1| Putative acyl-CoA dehydrogenase [Mycobacterium abscessus] Length=387 Score = 627 bits (1616), Expect = 1e-177, Method: Compositional matrix adjust. Identities = 291/387 (76%), Positives = 340/387 (88%), Gaps = 0/387 (0%) Query 1 MFIDLTPEQRQLQAEIRQYFSNLISPDERTEMEKDRHGPAYRAVIRRMGRDGRLGVGWPK 60 M IDLTPEQ +LQ ++R YFSNL++ +E EM DRHG +Y AV+RRMG+DG LGVGWPK Sbjct 1 MLIDLTPEQAKLQNDLRHYFSNLVTAEETREMMIDRHGSSYEAVVRRMGQDGWLGVGWPK 60 Query 61 EFGGLGFGPIEQQIFVNEAHRADVPLPAVTLQTVGPTLQAHGSELQKKKFLPAILAGEAH 120 E+GG GFGP+EQQIF+NE RADVP+P VTLQTVGPTLQ +G+E QKKKFLP ILAGE H Sbjct 61 EYGGHGFGPLEQQIFMNEVMRADVPMPLVTLQTVGPTLQKYGTEEQKKKFLPGILAGEIH 120 Query 121 FAIGYTEPEAGTDLASLRTTAVRDGDHYIVNGQKVFTTGAHDADYIWLACRTDPNAAKHK 180 FAIGYTEPEAGTDLASLRTTAVRDGDHY+VNGQK+FTTGAH A YIWLACRTDP+A KHK Sbjct 121 FAIGYTEPEAGTDLASLRTTAVRDGDHYVVNGQKIFTTGAHQAQYIWLACRTDPSAPKHK 180 Query 181 GISILIVDTKDPGYSWTPIILADGAHHTNATYYNDVRVPVDMLVGKENDGWRLITTQLNN 240 GISILIVDTKDPGYSWTPII DGAHHTNATYY DVRVPV+MLVG+EN GW+LITTQLN+ Sbjct 181 GISILIVDTKDPGYSWTPIITNDGAHHTNATYYTDVRVPVEMLVGEENAGWKLITTQLNH 240 Query 241 ERVMLGPAGRFASIYDRVHAWASVPGGNGVTPIDHDDVKRALGEIRAIWRINELLNWQVA 300 ERV LGP+GR A +YDRV+ WAS PG +GV P+ H+DV+R LGE++A+WR+NELLNWQVA Sbjct 241 ERVSLGPSGRIAGMYDRVYEWASKPGPDGVAPLSHEDVRRVLGEMKAVWRLNELLNWQVA 300 Query 301 SAGEDINMADAAATKVFGTERVQRAGRLAEEIVGKYGNPAEPDTAELLRWLDAQTKRNLV 360 S+G+DI+MADAAATK+ TE +Q+ GRL+E +VG+YG+PA+ +TAE L WLDAQTKR+LV Sbjct 301 SSGDDISMADAAATKILATEWIQKLGRLSEGVVGRYGDPADANTAETLEWLDAQTKRHLV 360 Query 361 ITFGGGVNEVMREMIAASGLKVPRVPR 387 ITFGGGVNEVMREM++ +GL PRVPR Sbjct 361 ITFGGGVNEVMREMVSTAGLGTPRVPR 387 >gi|226304198|ref|YP_002764156.1| acyl-CoA dehydrogenase [Rhodococcus erythropolis PR4] gi|226183313|dbj|BAH31417.1| putative acyl-CoA dehydrogenase [Rhodococcus erythropolis PR4] Length=383 Score = 593 bits (1529), Expect = 2e-167, Method: Compositional matrix adjust. Identities = 285/388 (74%), Positives = 327/388 (85%), Gaps = 6/388 (1%) Query 1 MFIDLTPEQRQLQAEIRQYFSNLISPDERTEMEKDRHGPAYRAVIRRMGRDGRLGVGWPK 60 MFIDLT QR LQAE+R+YFS LISP+E M +RHGP YR VIRRMG+DG LGVGWP Sbjct 1 MFIDLTDSQRALQAELRRYFSTLISPEEAKIMRVERHGPTYREVIRRMGKDGWLGVGWPV 60 Query 61 EFGGLGFGPIEQQIFVNEAHRADVPLPAVTLQTVGPTLQAHGSELQKKKFLPAILAGEAH 120 E+GG GFG +EQQIFVNEA RADVPLP+VTLQTVGPTLQ +GSE QK+KFLPAILAGE H Sbjct 61 EYGGRGFGEVEQQIFVNEAVRADVPLPSVTLQTVGPTLQKYGSEEQKQKFLPAILAGEVH 120 Query 121 FAIGYTEPEAGTDLASLRTTAVRDGDHYIVNGQKVFTTGAHDADYIWLACRTDPNAAKHK 180 FAIGYTEPEAGTDLA+LRT+A R+GD Y+VNGQK+FTTG HDADY+WLA RT ++H+ Sbjct 121 FAIGYTEPEAGTDLAALRTSATRNGDEYVVNGQKIFTTGGHDADYVWLAARTGSADSRHR 180 Query 181 GISILIVDTKDPGYSWTPIILADGAHHTNATYYNDVRVPVDMLVGKENDGWRLITTQLNN 240 GISILI+DTKDPGY+WTPII DGAHH NATYY DVRVP +MLVG+EN GWRLITTQLN+ Sbjct 181 GISILIMDTKDPGYTWTPIITCDGAHHVNATYYEDVRVPANMLVGEENQGWRLITTQLNH 240 Query 241 ERVMLGPAGRFASIYDRVHAWASVPGGNGVTPIDHDDVKRALGEIRAIWRINELLNWQVA 300 ERVMLGPAGR A IYD V WA +DH DV+RALGEI A +R+NELLNWQVA Sbjct 241 ERVMLGPAGRVAGIYDHVFDWAKRE-----NLLDHVDVRRALGEIHATYRLNELLNWQVA 295 Query 301 SA-GEDINMADAAATKVFGTERVQRAGRLAEEIVGKYGNPAEPDTAELLRWLDAQTKRNL 359 S+ E +++ADA+ATKVF TER+QR GRLAEEIVG+YGNP +P+TA+L+ WLD Q KRNL Sbjct 296 SSDSESVDIADASATKVFATERIQRVGRLAEEIVGRYGNPIDPETADLMEWLDMQIKRNL 355 Query 360 VITFGGGVNEVMREMIAASGLKVPRVPR 387 VITFGGGVNEVMRE+IA +GLK+PRVPR Sbjct 356 VITFGGGVNEVMRELIATAGLKLPRVPR 383 >gi|229494630|ref|ZP_04388393.1| Acyl-CoA dehydrogenase, middle domain [Rhodococcus erythropolis SK121] gi|229318992|gb|EEN84850.1| Acyl-CoA dehydrogenase, middle domain [Rhodococcus erythropolis SK121] Length=383 Score = 592 bits (1526), Expect = 3e-167, Method: Compositional matrix adjust. Identities = 285/388 (74%), Positives = 327/388 (85%), Gaps = 6/388 (1%) Query 1 MFIDLTPEQRQLQAEIRQYFSNLISPDERTEMEKDRHGPAYRAVIRRMGRDGRLGVGWPK 60 MFIDLT QR LQAE+R+YFS LISP+E M +RHGP YR VIRRMG+DG LGVGWP Sbjct 1 MFIDLTDSQRALQAELRRYFSTLISPEEAKIMRVERHGPTYREVIRRMGKDGWLGVGWPV 60 Query 61 EFGGLGFGPIEQQIFVNEAHRADVPLPAVTLQTVGPTLQAHGSELQKKKFLPAILAGEAH 120 E+GG GFG +EQQIFVNEA RADVPLP+VTLQTVGPTLQ +GSE QK+KFLPAILAGE H Sbjct 61 EYGGRGFGEVEQQIFVNEAVRADVPLPSVTLQTVGPTLQKYGSEEQKQKFLPAILAGEVH 120 Query 121 FAIGYTEPEAGTDLASLRTTAVRDGDHYIVNGQKVFTTGAHDADYIWLACRTDPNAAKHK 180 FAIGYTEPEAGTDLA+LRT+A R+GD Y+VNGQK+FTTG HDADY+WLA RT ++H+ Sbjct 121 FAIGYTEPEAGTDLAALRTSAARNGDEYVVNGQKIFTTGGHDADYVWLAVRTGSADSRHR 180 Query 181 GISILIVDTKDPGYSWTPIILADGAHHTNATYYNDVRVPVDMLVGKENDGWRLITTQLNN 240 GISILI+DTKDPGY+WTPII DGAHH NATYY DVRVP +MLVG+EN GWRLITTQLN+ Sbjct 181 GISILIMDTKDPGYTWTPIITCDGAHHVNATYYEDVRVPANMLVGEENQGWRLITTQLNH 240 Query 241 ERVMLGPAGRFASIYDRVHAWASVPGGNGVTPIDHDDVKRALGEIRAIWRINELLNWQVA 300 ERVMLGPAGR A IYD V WA +DH DV+RALGEI A +R+NELLNWQVA Sbjct 241 ERVMLGPAGRVAGIYDHVFDWAKRE-----NLLDHVDVRRALGEIHATYRLNELLNWQVA 295 Query 301 SAGED-INMADAAATKVFGTERVQRAGRLAEEIVGKYGNPAEPDTAELLRWLDAQTKRNL 359 S+ D +++ADA+ATKVF TER+QR GRLAEEIVG+YGNP +P+TA+L+ WLD Q KRNL Sbjct 296 SSDSDSVDIADASATKVFATERIQRVGRLAEEIVGRYGNPIDPETADLMEWLDMQIKRNL 355 Query 360 VITFGGGVNEVMREMIAASGLKVPRVPR 387 VITFGGGVNEVMRE+IA +GLK+PRVPR Sbjct 356 VITFGGGVNEVMRELIATAGLKLPRVPR 383 >gi|111021457|ref|YP_704429.1| acyl-CoA dehydrogenase [Rhodococcus jostii RHA1] gi|110820987|gb|ABG96271.1| probable acyl-CoA dehydrogenase [Rhodococcus jostii RHA1] Length=383 Score = 592 bits (1526), Expect = 3e-167, Method: Compositional matrix adjust. Identities = 288/388 (75%), Positives = 327/388 (85%), Gaps = 6/388 (1%) Query 1 MFIDLTPEQRQLQAEIRQYFSNLISPDERTEMEKDRHGPAYRAVIRRMGRDGRLGVGWPK 60 MFIDLT EQR+LQAE+R+YFS LISP E M +RH YR VIRRMG+DG LGVGWP Sbjct 1 MFIDLTDEQRELQAELRRYFSGLISPAEAEVMRTERHCSTYREVIRRMGKDGWLGVGWPV 60 Query 61 EFGGLGFGPIEQQIFVNEAHRADVPLPAVTLQTVGPTLQAHGSELQKKKFLPAILAGEAH 120 EFGG GFG IEQQIFVNEA RADVPLPAVTLQTVGPTLQ +G+E QK+KFLPAILAGE H Sbjct 61 EFGGRGFGEIEQQIFVNEATRADVPLPAVTLQTVGPTLQKYGTEEQKRKFLPAILAGEVH 120 Query 121 FAIGYTEPEAGTDLASLRTTAVRDGDHYIVNGQKVFTTGAHDADYIWLACRTDPNAAKHK 180 FAIGYTEPEAGTDLA+LRTTAVR GD YIVNGQK+FTTG HDADY+WLA RT ++H+ Sbjct 121 FAIGYTEPEAGTDLAALRTTAVRVGDEYIVNGQKIFTTGGHDADYLWLAVRTGSADSRHR 180 Query 181 GISILIVDTKDPGYSWTPIILADGAHHTNATYYNDVRVPVDMLVGKENDGWRLITTQLNN 240 GISILI+DTKDPGYSWTPII DGAHH NATYY+DVRVP DMLVG+EN GWRLITTQLN+ Sbjct 181 GISILIMDTKDPGYSWTPIITCDGAHHVNATYYSDVRVPADMLVGEENQGWRLITTQLNH 240 Query 241 ERVMLGPAGRFASIYDRVHAWASVPGGNGVTPIDHDDVKRALGEIRAIWRINELLNWQVA 300 ERVMLGPAGR +YDR+ WA +D DV+RALGEI A +R+NELLNWQVA Sbjct 241 ERVMLGPAGRVGGLYDRIRNWAVAH-----DLLDEPDVRRALGEIHATFRLNELLNWQVA 295 Query 301 SAGED-INMADAAATKVFGTERVQRAGRLAEEIVGKYGNPAEPDTAELLRWLDAQTKRNL 359 S+ D +++ADA+ATKVF TER+QR GRL EEIVG+YG+P+EP+TA+L+RWLD Q KRNL Sbjct 296 SSEADAVDIADASATKVFATERIQRIGRLVEEIVGRYGDPSEPETADLMRWLDMQVKRNL 355 Query 360 VITFGGGVNEVMREMIAASGLKVPRVPR 387 VITFGGGVNEVMRE+IA +GLK+PRVPR Sbjct 356 VITFGGGVNEVMRELIATAGLKLPRVPR 383 >gi|226363823|ref|YP_002781605.1| acyl-CoA dehydrogenase [Rhodococcus opacus B4] gi|226242312|dbj|BAH52660.1| putative acyl-CoA dehydrogenase [Rhodococcus opacus B4] Length=383 Score = 589 bits (1519), Expect = 2e-166, Method: Compositional matrix adjust. Identities = 288/388 (75%), Positives = 327/388 (85%), Gaps = 6/388 (1%) Query 1 MFIDLTPEQRQLQAEIRQYFSNLISPDERTEMEKDRHGPAYRAVIRRMGRDGRLGVGWPK 60 MFIDLT EQR+LQAE+R+YFS LISP E M +RHG YR VIRRMG+DG LGVGWP Sbjct 1 MFIDLTDEQRELQAELRRYFSGLISPAEAEVMRTERHGATYREVIRRMGKDGWLGVGWPV 60 Query 61 EFGGLGFGPIEQQIFVNEAHRADVPLPAVTLQTVGPTLQAHGSELQKKKFLPAILAGEAH 120 EFGG GFG IEQQIFVNEA RADVPLP+VTLQTVGPTLQ +G+E QK+KFLPAILAGE H Sbjct 61 EFGGRGFGEIEQQIFVNEAVRADVPLPSVTLQTVGPTLQKYGTEEQKRKFLPAILAGEVH 120 Query 121 FAIGYTEPEAGTDLASLRTTAVRDGDHYIVNGQKVFTTGAHDADYIWLACRTDPNAAKHK 180 FAIGYTEPEAGTDLA+LRTTAVR GD Y+VNGQK+FTTG HDADY+WLA RT P ++H+ Sbjct 121 FAIGYTEPEAGTDLAALRTTAVRVGDEYVVNGQKIFTTGGHDADYLWLAVRTGPADSRHR 180 Query 181 GISILIVDTKDPGYSWTPIILADGAHHTNATYYNDVRVPVDMLVGKENDGWRLITTQLNN 240 GISILI+DTKDPGYSWTPII DGAHH NATYY+DVRVP DMLVG+EN GWRLITTQLN+ Sbjct 181 GISILIMDTKDPGYSWTPIITCDGAHHVNATYYSDVRVPADMLVGEENQGWRLITTQLNH 240 Query 241 ERVMLGPAGRFASIYDRVHAWASVPGGNGVTPIDHDDVKRALGEIRAIWRINELLNWQVA 300 ERVMLGPAGR +YDRV WA+ G DV+RALGEI A +R+NELLNWQVA Sbjct 241 ERVMLGPAGRVGGLYDRVRNWAAAHDLLG-----EPDVRRALGEIHATYRLNELLNWQVA 295 Query 301 SAGED-INMADAAATKVFGTERVQRAGRLAEEIVGKYGNPAEPDTAELLRWLDAQTKRNL 359 S+ D +++ADA+ATKVF TER+QR GRL EEIVG+YG+P+EP TA+L+ WLD Q KRNL Sbjct 296 SSEADAVDVADASATKVFATERIQRIGRLVEEIVGRYGDPSEPATADLVTWLDMQVKRNL 355 Query 360 VITFGGGVNEVMREMIAASGLKVPRVPR 387 VITFGGGVNEVMRE+IA +GLK+PRVPR Sbjct 356 VITFGGGVNEVMRELIATAGLKLPRVPR 383 >gi|312138119|ref|YP_004005455.1| acyl-CoA dehydrogenase [Rhodococcus equi 103S] gi|325674976|ref|ZP_08154663.1| acyl-CoA dehydrogenase [Rhodococcus equi ATCC 33707] gi|311887458|emb|CBH46770.1| acyl-CoA dehydrogenase [Rhodococcus equi 103S] gi|325554562|gb|EGD24237.1| acyl-CoA dehydrogenase [Rhodococcus equi ATCC 33707] Length=382 Score = 584 bits (1506), Expect = 8e-165, Method: Compositional matrix adjust. Identities = 280/387 (73%), Positives = 328/387 (85%), Gaps = 5/387 (1%) Query 1 MFIDLTPEQRQLQAEIRQYFSNLISPDERTEMEKDRHGPAYRAVIRRMGRDGRLGVGWPK 60 MFIDLTPEQR+LQAE+R+YFS LISP E M +RHGP YR VIRRMG+DG LGVGWP Sbjct 1 MFIDLTPEQRELQAELRRYFSGLISPAEAEIMLTERHGPTYREVIRRMGKDGWLGVGWPV 60 Query 61 EFGGLGFGPIEQQIFVNEAHRADVPLPAVTLQTVGPTLQAHGSELQKKKFLPAILAGEAH 120 EFGG GFG IEQQIFVNEA RADVPLP+VTLQTVGPTL +G+E QK+KFLPAILAGE H Sbjct 61 EFGGRGFGEIEQQIFVNEAVRADVPLPSVTLQTVGPTLMTYGTEEQKRKFLPAILAGEVH 120 Query 121 FAIGYTEPEAGTDLASLRTTAVRDGDHYIVNGQKVFTTGAHDADYIWLACRTDPNAAKHK 180 FAIGY+EP+AGTDLA+LRTTAVRDGD YIVNGQK+FTTG HDADYIWLA RT ++H+ Sbjct 121 FAIGYSEPDAGTDLAALRTTAVRDGDDYIVNGQKIFTTGGHDADYIWLAVRTGEAESRHR 180 Query 181 GISILIVDTKDPGYSWTPIILADGAHHTNATYYNDVRVPVDMLVGKENDGWRLITTQLNN 240 GISILIVDTKDPG+SWTPII ADGAHH NATYY+DVRVP MLVG+EN GWRL+TTQLN+ Sbjct 181 GISILIVDTKDPGFSWTPIITADGAHHVNATYYSDVRVPASMLVGEENKGWRLLTTQLNH 240 Query 241 ERVMLGPAGRFASIYDRVHAWASVPGGNGVTPIDHDDVKRALGEIRAIWRINELLNWQVA 300 ERVMLGPAGR A +Y++V+ WA+ +D DV+R LGEI A +R+NELLNWQVA Sbjct 241 ERVMLGPAGRVAGLYEKVYDWAA-----KRELLDLPDVRRGLGEIHATYRLNELLNWQVA 295 Query 301 SAGEDINMADAAATKVFGTERVQRAGRLAEEIVGKYGNPAEPDTAELLRWLDAQTKRNLV 360 +A D+++ADA+ATKVF TER+QR GR+ +EIVG +G+P +P+TA L+RWLD Q KRN+V Sbjct 296 AATGDVDIADASATKVFATERIQRVGRIVDEIVGAHGDPGDPETAALMRWLDVQVKRNVV 355 Query 361 ITFGGGVNEVMREMIAASGLKVPRVPR 387 ITFGGGVNEVMRE+IA +GL +P+VPR Sbjct 356 ITFGGGVNEVMRELIAVAGLGLPKVPR 382 >gi|262200882|ref|YP_003272090.1| acyl-CoA dehydrogenase domain-containing protein [Gordonia bronchialis DSM 43247] gi|262084229|gb|ACY20197.1| acyl-CoA dehydrogenase domain protein [Gordonia bronchialis DSM 43247] Length=387 Score = 578 bits (1490), Expect = 6e-163, Method: Compositional matrix adjust. Identities = 283/387 (74%), Positives = 317/387 (82%), Gaps = 0/387 (0%) Query 1 MFIDLTPEQRQLQAEIRQYFSNLISPDERTEMEKDRHGPAYRAVIRRMGRDGRLGVGWPK 60 MFIDLTPEQR L+A++R YF++L++PDE M +RHGP YR VIRRMGRDG LGVGWP Sbjct 1 MFIDLTPEQRALRAQLRSYFADLVTPDEARVMLTERHGPTYREVIRRMGRDGWLGVGWPT 60 Query 61 EFGGLGFGPIEQQIFVNEAHRADVPLPAVTLQTVGPTLQAHGSELQKKKFLPAILAGEAH 120 +GG GFG IEQQIF NEA RADVPLPAVTLQTVGPTLQ HG+E QK+KFLPAILAGE H Sbjct 61 TYGGRGFGEIEQQIFTNEAIRADVPLPAVTLQTVGPTLQEHGTEEQKQKFLPAILAGEVH 120 Query 121 FAIGYTEPEAGTDLASLRTTAVRDGDHYIVNGQKVFTTGAHDADYIWLACRTDPNAAKHK 180 FAIGYTEPEAGTDLASL T+AV DGDHYIVNGQK+FTTG HDADYIWLA RTD +A KHK Sbjct 121 FAIGYTEPEAGTDLASLTTSAVLDGDHYIVNGQKIFTTGGHDADYIWLAVRTDKDAPKHK 180 Query 181 GISILIVDTKDPGYSWTPIILADGAHHTNATYYNDVRVPVDMLVGKENDGWRLITTQLNN 240 GISILIVDTKDPG+SWTPII ADGAHH NATYYNDVRVPV M VG E GW+LITTQLN+ Sbjct 181 GISILIVDTKDPGFSWTPIITADGAHHVNATYYNDVRVPVSMRVGDEGGGWKLITTQLNH 240 Query 241 ERVMLGPAGRFASIYDRVHAWASVPGGNGVTPIDHDDVKRALGEIRAIWRINELLNWQVA 300 ERVMLGPAGR + RV AWA PG +G H DV+RAL +I A RINELLNWQVA Sbjct 241 ERVMLGPAGRIDGLAARVRAWAQRPGPDGTVIAKHPDVRRALAQIDAYARINELLNWQVA 300 Query 301 SAGEDINMADAAATKVFGTERVQRAGRLAEEIVGKYGNPAEPDTAELLRWLDAQTKRNLV 360 S GE I+MADAAATKVF TERVQ R+ EI+G+ G+ + +TAEL+ WLD Q KR++V Sbjct 301 STGEAISMADAAATKVFSTERVQVVCRMINEIIGRNGDFTDSETAELVDWLDVQQKRHVV 360 Query 361 ITFGGGVNEVMREMIAASGLKVPRVPR 387 ITFGGGVNEVMR+MIA +GL +PR R Sbjct 361 ITFGGGVNEVMRDMIATAGLGLPRAKR 387 >gi|343925844|ref|ZP_08765359.1| putative acyl-CoA dehydrogenase [Gordonia alkanivorans NBRC 16433] gi|343764195|dbj|GAA12285.1| putative acyl-CoA dehydrogenase [Gordonia alkanivorans NBRC 16433] Length=387 Score = 575 bits (1483), Expect = 4e-162, Method: Compositional matrix adjust. Identities = 277/387 (72%), Positives = 318/387 (83%), Gaps = 0/387 (0%) Query 1 MFIDLTPEQRQLQAEIRQYFSNLISPDERTEMEKDRHGPAYRAVIRRMGRDGRLGVGWPK 60 MFIDLTPEQR L+ E+R+YF++L++P+E M +RHGP YR VI+RMG DG LGVGWPK Sbjct 1 MFIDLTPEQRALREELREYFADLVTPEEAKVMLTERHGPTYRKVIKRMGDDGWLGVGWPK 60 Query 61 EFGGLGFGPIEQQIFVNEAHRADVPLPAVTLQTVGPTLQAHGSELQKKKFLPAILAGEAH 120 EFGG GFG IEQQIF NEA RADVPLP+VTLQTVGPTLQ HG+E QK+ FLPAILAG+ H Sbjct 61 EFGGKGFGEIEQQIFTNEAVRADVPLPSVTLQTVGPTLQVHGTEEQKRIFLPAILAGDVH 120 Query 121 FAIGYTEPEAGTDLASLRTTAVRDGDHYIVNGQKVFTTGAHDADYIWLACRTDPNAAKHK 180 FAIGYTEPEAGTDLASL TTAV DGDHY+VNGQK+FTTG HDADYIWLA RTD +A KHK Sbjct 121 FAIGYTEPEAGTDLASLSTTAVLDGDHYVVNGQKIFTTGGHDADYIWLAVRTDKDAPKHK 180 Query 181 GISILIVDTKDPGYSWTPIILADGAHHTNATYYNDVRVPVDMLVGKENDGWRLITTQLNN 240 GISILIVDT+DPG+SWTPII ADGAHH NATYY DV+VPV M VG+E DGW+LITTQLN+ Sbjct 181 GISILIVDTRDPGFSWTPIITADGAHHVNATYYQDVKVPVTMRVGEEGDGWKLITTQLNH 240 Query 241 ERVMLGPAGRFASIYDRVHAWASVPGGNGVTPIDHDDVKRALGEIRAIWRINELLNWQVA 300 ERVMLGPAGR + R+ AW PG +G H DV+RAL I A RINELLNWQVA Sbjct 241 ERVMLGPAGRIDGLAARLRAWTQRPGPDGTVIAKHPDVRRALATIDAYGRINELLNWQVA 300 Query 301 SAGEDINMADAAATKVFGTERVQRAGRLAEEIVGKYGNPAEPDTAELLRWLDAQTKRNLV 360 S GE I+MADAAATKVF TER+Q R+A EI+G+YG+ +P+TA L+ WLD Q KR++V Sbjct 301 STGEAISMADAAATKVFSTERIQSVCRMANEIIGRYGDFTDPETAALVDWLDVQQKRHVV 360 Query 361 ITFGGGVNEVMREMIAASGLKVPRVPR 387 ITFGGGVNEVMR+MIA +GL +PR R Sbjct 361 ITFGGGVNEVMRDMIATAGLGLPRAKR 387 >gi|54022414|ref|YP_116656.1| putative acyl-CoA dehydrogenase [Nocardia farcinica IFM 10152] gi|54013922|dbj|BAD55292.1| putative acyl-CoA dehydrogenase [Nocardia farcinica IFM 10152] Length=389 Score = 557 bits (1436), Expect = 9e-157, Method: Compositional matrix adjust. Identities = 269/394 (69%), Positives = 323/394 (82%), Gaps = 12/394 (3%) Query 1 MFIDLTPEQRQLQAEIRQYFSNLISPDERTEMEKDRHGPAYRAVIRRMGRDGRLGVGWPK 60 MFIDLT EQR L+ E+R YF+ L++P+E EM +RHG AYRAV+RRMGRDG LGVGWPK Sbjct 1 MFIDLTAEQRALRDELRSYFAGLVTPEEEAEMAVNRHGDAYRAVVRRMGRDGWLGVGWPK 60 Query 61 EFGGLGFGPIEQQIFVNEAHRADVPLPAVTLQTVGPTLQAHGSELQKKKFLPAILAGEAH 120 EFGG GFGP+EQQIF NEA RADVPLP VTL TVGPTLQ +G+E QK+KFLPAIL G+ H Sbjct 61 EFGGQGFGPVEQQIFYNEAVRADVPLPLVTLLTVGPTLQVYGTEEQKQKFLPAILTGDIH 120 Query 121 FAIGYTEPEAGTDLASLRTTAVRDGD-HYIVNGQKVFTTGAHDADYIWLACRTDPNAAKH 179 FAIGY+EPEAGTDLA+LRT+AVRD +IVNGQK+FTTGAH+ADYIWLACRT ++H Sbjct 121 FAIGYSEPEAGTDLAALRTSAVRDASGDWIVNGQKIFTTGAHEADYIWLACRTGTVESRH 180 Query 180 KGISILIVDTKDPGYSWTPIILADGAHHTNATYYNDVRVPVDMLVGKENDGWRLITTQLN 239 +GI+ILIVDTKDPGYSWTPII DGAHHTNATY+++VRVP +MLVG+EN GW+LITTQLN Sbjct 181 RGITILIVDTKDPGYSWTPIITCDGAHHTNATYFDNVRVPANMLVGEENRGWQLITTQLN 240 Query 240 NERVMLGPAGRFASIYDRVHAWASVPGGNGVTPIDHDDVKRALGEIRAIWRINELLNWQV 299 +ERV LGP+G+ +YDRV WA+ G + DV+R LG + A+ R+NELLNWQV Sbjct 241 HERVGLGPSGKIEQLYDRVREWAAAQG-----VLAEPDVRRTLGRVHAMVRLNELLNWQV 295 Query 300 ASAGEDIN------MADAAATKVFGTERVQRAGRLAEEIVGKYGNPAEPDTAELLRWLDA 353 A E + +ADA+ATKVF TE++Q AGRL EEIVG+YG+PAEP TAELL WLD Sbjct 296 AGTAERADADQSQVIADASATKVFSTEKLQEAGRLVEEIVGRYGDPAEPATAELLGWLDR 355 Query 354 QTKRNLVITFGGGVNEVMREMIAASGLKVPRVPR 387 +TK+NLV+TFGGGVNE+MRE++A +GLK+PRVPR Sbjct 356 RTKQNLVVTFGGGVNEIMRELVATAGLKLPRVPR 389 >gi|296141526|ref|YP_003648769.1| acyl-CoA dehydrogenase domain-containing protein [Tsukamurella paurometabola DSM 20162] gi|296029660|gb|ADG80430.1| acyl-CoA dehydrogenase domain protein [Tsukamurella paurometabola DSM 20162] Length=751 Score = 552 bits (1423), Expect = 3e-155, Method: Compositional matrix adjust. Identities = 274/389 (71%), Positives = 317/389 (82%), Gaps = 9/389 (2%) Query 2 FIDLTPEQRQLQAEIRQYFSNLISPDERTEMEKDRHGPAYRAVIRRMGRDGRLGVGWPKE 61 FI LT EQR LQAE+R YFS L+S DERT M RHG +R V+RRMG DGRLGVGWP E Sbjct 369 FIALTHEQRALQAELRDYFSTLMSSDERTAMLVQRHGEVFRNVVRRMGLDGRLGVGWPTE 428 Query 62 FGGLGFGPIEQQIFVNEAHRADVPLPAVTLQTVGPTLQAHGSELQKKKFLPAILAGEAHF 121 +GG GFGPIEQ +FVNEA RADV LP+VTLQTVGPTLQA G+E QK KFLP IL+GE HF Sbjct 429 YGGRGFGPIEQYLFVNEATRADVQLPSVTLQTVGPTLQAFGTEEQKAKFLPKILSGEVHF 488 Query 122 AIGYTEPEAGTDLASLRTTAVRDGDHYIVNGQKVFTTGAHDADYIWLACRTDPNAAKHKG 181 AIGYTEPEAGTDLASLRTTAVRDGDHY+VNGQK+FTTG HDADY+WLA RTDP+A KHKG Sbjct 489 AIGYTEPEAGTDLASLRTTAVRDGDHYVVNGQKIFTTGGHDADYVWLAVRTDPDAPKHKG 548 Query 182 ISILIVDTKDPGYSWTPIILADGAHHTNATYYNDVRVPVDMLVGKENDGWRLITTQLNNE 241 ISILI+DT DPGY+WTPII ADGAHH NATYYNDVRVP +MLVG EN+GW+LITTQLN+E Sbjct 549 ISILILDTSDPGYTWTPIITADGAHHVNATYYNDVRVPAEMLVGVENEGWKLITTQLNHE 608 Query 242 RVMLGPAGRFASIYDRVHAWASVPGGNGVTPIDHD-DVKRALGEIRAIWRINELLNWQVA 300 RVMLGP+GR S+YDRV WA+ G +D D DV AL ++RA +NELLNWQVA Sbjct 609 RVMLGPSGRIGSLYDRVADWATEHG------VDTDPDVAAALAQVRAAELVNELLNWQVA 662 Query 301 S--AGEDINMADAAATKVFGTERVQRAGRLAEEIVGKYGNPAEPDTAELLRWLDAQTKRN 358 + AG +++ADA+ATKVFG++R+Q L E++VG +G+P E T ELL WLD Q KRN Sbjct 663 AAEAGGPVDVADASATKVFGSDRIQALTALLEDVVGTHGDPGEAATGELLHWLDVQAKRN 722 Query 359 LVITFGGGVNEVMREMIAASGLKVPRVPR 387 LV+TFGGGVNE+ RE+IA GL++PRVPR Sbjct 723 LVLTFGGGVNEIQRELIALMGLQLPRVPR 751 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 58/192 (31%), Positives = 87/192 (46%), Gaps = 11/192 (5%) Query 41 YRAVIRRMGRDGRLGVGWPKEFGGLGFGPIEQQIFVNEAHRADVPLPAVTLQTVG-PTLQ 99 +RA + R LG+ P+ GG G G E + EA R P + +G + Sbjct 29 WRATWTDLARADLLGLHAPESVGGAGLGAEEMTAVLTEAGRLHCTAPLLPALALGIAPVA 88 Query 100 AHGSELQKKKFLPAILAGEAHFAIGYTEPEAGTDLASL-RTTAVRDGDHYIVNGQKVFTT 158 AHG+ Q+++ LPA L+GE +G EAG L RT A R D + + G+KV Sbjct 89 AHGTTEQQQRLLPAALSGE-QLIVGALN-EAGAALPRHPRTRAERTADGWSLTGRKVAVG 146 Query 159 GAHDADYIWLACRTDPNAAKHKGISILIVDTKDPGYSWTPIILADGAHHTNATYYNDVRV 218 A A ++ ++ TD AA I +VD+ PG + P + A + V + Sbjct 147 YAQHAAHLLVSASTDAGAA------IFVVDSGAPGLTVLPSPSSSAAPEATVV-LDAVEL 199 Query 219 PVDMLVGKENDG 230 P D ++G DG Sbjct 200 PPDAVLGSGVDG 211 >gi|302525651|ref|ZP_07277993.1| pimeloyl-CoA dehydrogenase, large subunit [Streptomyces sp. AA4] gi|302434546|gb|EFL06362.1| pimeloyl-CoA dehydrogenase, large subunit [Streptomyces sp. AA4] Length=392 Score = 551 bits (1421), Expect = 6e-155, Method: Compositional matrix adjust. Identities = 265/390 (68%), Positives = 321/390 (83%), Gaps = 3/390 (0%) Query 1 MFIDLTPEQRQLQAEIRQYFSNLISPDERTEMEKDRHGPAYRAVIRRMGRDGRLGVGWPK 60 M I+LT Q++L+A++R+YF+ L++ DER + ++RHG YR V+RRMGRDG+LGVGWPK Sbjct 3 MHIELTAAQQELRAQLREYFAGLLTADERRALLRERHGQVYRDVVRRMGRDGKLGVGWPK 62 Query 61 EFGGLGFGPIEQQIFVNEAHRADVPLPAVTLQTVGPTLQAHGSELQKKKFLPAILAGEAH 120 E+GG GFG IEQ IFV+EA RADV LP+VTLQTVGPTLQA G+E QK FLP ILAGE H Sbjct 63 EYGGGGFGEIEQHIFVDEAARADVQLPSVTLQTVGPTLQAFGTEEQKALFLPKILAGEVH 122 Query 121 FAIGYTEPEAGTDLASLRTTAVRDGDHYIVNGQKVFTTGAHDADYIWLACRTDPNAAKHK 180 FAIGYTEPEAGTDLA+LRT AVRDGD Y++NGQK+FTTG HDADYIWLA RTDP+A KHK Sbjct 123 FAIGYTEPEAGTDLAALRTRAVRDGDEYVINGQKIFTTGGHDADYIWLAVRTDPDAPKHK 182 Query 181 GISILIVDTKDPGYSWTPIILADGAHHTNATYYNDVRVPVDMLVGKENDGWRLITTQLNN 240 GISILIVDT+DPGYSWTPII DGAHH NAT+Y DVRVP +MLVG+EN GWRLITTQLN+ Sbjct 183 GISILIVDTRDPGYSWTPIITCDGAHHVNATFYEDVRVPANMLVGEENRGWRLITTQLNH 242 Query 241 ERVMLGPAGRFASIYDRVHAWASVPGG-NGVTPIDHDDVKRALGEIRAIWRINELLNWQV 299 ERVMLGPAGR ++DRV AWA+ +G +D DV+ L E A+ R+NELLNWQV Sbjct 243 ERVMLGPAGRIGGLHDRVWAWAAARRTPDGTALLDLPDVRAVLAETFAVARVNELLNWQV 302 Query 300 ASAGE--DINMADAAATKVFGTERVQRAGRLAEEIVGKYGNPAEPDTAELLRWLDAQTKR 357 A+A + +ADA+ATKVF +ER+QR GRL EE+VG++G+ A+PDTA+L WLD KR Sbjct 303 AAAAAHGSVEIADASATKVFASERIQRIGRLLEELVGRHGDLADPDTADLAEWLDVLAKR 362 Query 358 NLVITFGGGVNEVMREMIAASGLKVPRVPR 387 NLV+TFGGGV+E+ RE+IA++GLK+PRVPR Sbjct 363 NLVLTFGGGVSEIQRELIASAGLKLPRVPR 392 >gi|326384607|ref|ZP_08206286.1| acyl-CoA dehydrogenase domain-containing protein [Gordonia neofelifaecis NRRL B-59395] gi|326196741|gb|EGD53936.1| acyl-CoA dehydrogenase domain-containing protein [Gordonia neofelifaecis NRRL B-59395] Length=388 Score = 537 bits (1383), Expect = 2e-150, Method: Compositional matrix adjust. Identities = 270/390 (70%), Positives = 304/390 (78%), Gaps = 5/390 (1%) Query 1 MFIDLTPEQRQLQAEIRQYFSNLISPDERTEMEKDRHGPAYRAVIRRMGRDGRLGVGWPK 60 MF+ T EQ L+ E+R YF+ LIS DE M +RHGP YR VI RMG DGRLGVGWPK Sbjct 1 MFVAFTEEQIALRDELRSYFTGLISRDEEITMRTERHGPTYRNVIARMGADGRLGVGWPK 60 Query 61 EFGGLGFGPIEQQIFVNEAHRADVPLPAVTLQTVGPTLQAHGSELQKKKFLPAILAGEAH 120 EFGG GFG IEQQIF NEA RADVPLP+VTLQTVGPTLQ +G++ QK FLP ILAG H Sbjct 61 EFGGKGFGEIEQQIFTNEAVRADVPLPSVTLQTVGPTLQRYGTQEQKDFFLPKILAGTVH 120 Query 121 FAIGYTEPEAGTDLASLRTTAVRD---GDHYIVNGQKVFTTGAHDADYIWLACRTDPNAA 177 FAIGYTEP+AGTDLASL T AV D GD YIVNGQK+FTTG HDADYIWLACRTDP+A Sbjct 121 FAIGYTEPDAGTDLASLTTRAVVDPATGD-YIVNGQKIFTTGGHDADYIWLACRTDPDAP 179 Query 178 KHKGISILIVDTKDPGYSWTPIILADGAHHTNATYYNDVRVPVDMLVGKENDGWRLITTQ 237 KHKGISILIVDTKDPG+SWTPII ADGAHH NATYYNDVRVP M VG+E DGW+LITTQ Sbjct 180 KHKGISILIVDTKDPGFSWTPIITADGAHHVNATYYNDVRVPASMRVGEEGDGWKLITTQ 239 Query 238 LNNERVMLGPAGRFASIYDRVHAWASVPGGNGVTPIDHDDVKRALGEIRAIWRINELLNW 297 LN+ERVMLGP+GR + DRV WA +G I V+R L +I A R+NELLNW Sbjct 240 LNHERVMLGPSGRIGGLEDRVRRWAETAQFDGAPVIGQQRVRRLLAQIGAYERLNELLNW 299 Query 298 QVASAGEDINMADAAATKVFGTERVQRAGRLAEEIVGKYGNPAEPDTAELLRWLDAQTKR 357 QVAS GE I+MADAAATKVF TER+Q RL +++VG YG+ EP TAE + WLD Q KR Sbjct 300 QVASNGE-ISMADAAATKVFSTERLQVIYRLIDDVVGHYGDFTEPVTAEFVEWLDIQAKR 358 Query 358 NLVITFGGGVNEVMREMIAASGLKVPRVPR 387 N+VITFGGGVNEVMR+MI +GL +PR+ R Sbjct 359 NVVITFGGGVNEVMRDMIGTAGLGLPRMKR 388 >gi|340525837|gb|AEK41042.1| acyl-CoA dehydrogenase [Amycolatopsis mediterranei S699] Length=384 Score = 536 bits (1382), Expect = 2e-150, Method: Compositional matrix adjust. Identities = 264/389 (68%), Positives = 316/389 (82%), Gaps = 7/389 (1%) Query 1 MFIDLTPEQRQLQAEIRQYFSNLISPDERTEMEKDRHGPAYRAVIRRMGRDGRLGVGWPK 60 M ++LT QRQL+AE+R+YF+ LISP+ER M ++RHGP +R ++RRMGRDGRLGVGWP Sbjct 1 MHVELTTAQRQLRAELREYFAGLISPEERRAMRRERHGPVFREIVRRMGRDGRLGVGWPV 60 Query 61 EFGGLGFGPIEQQIFVNEAHRADVPLPAVTLQTVGPTLQAHGSELQKKKFLPAILAGEAH 120 E+GG GFG IEQ +FV+EA RADV LP+VTLQTVGPTLQ G++ Q+ FLP ILAGE H Sbjct 61 EYGGQGFGGIEQHLFVDEAARADVQLPSVTLQTVGPTLQEFGTDEQRSFFLPKILAGEIH 120 Query 121 FAIGYTEPEAGTDLASLRTTAVRDGDHYIVNGQKVFTTGAHDADYIWLACRTDPNAAKHK 180 FAIGY+EPEAGTDLA+LRTTAVRDGD Y+VNGQK+FTTG HDADY+WLA RT P+A KHK Sbjct 121 FAIGYSEPEAGTDLAALRTTAVRDGDEYVVNGQKIFTTGGHDADYVWLAVRTAPDAPKHK 180 Query 181 GISILIVDTKDPGYSWTPIILADGAHHTNATYYNDVRVPVDMLVGKENDGWRLITTQLNN 240 GISILIVDT+DPGYSWTPII DGAHH NATYY+DVRVPV+ LVG+EN GWRLITTQLN+ Sbjct 181 GISILIVDTRDPGYSWTPIITCDGAHHVNATYYSDVRVPVNRLVGQENAGWRLITTQLNH 240 Query 241 ERVMLGPAGRFASIYDRVHAWASVPGGNGVTPIDHDDVKRALGEIRAIWRINELLNWQVA 300 ERVMLGPAGR +YDRV AWAS G +D DV+ L E A+ R+NELLNWQVA Sbjct 241 ERVMLGPAGRIGGLYDRVRAWASAHG-----LLDLADVRAVLAEALAVTRVNELLNWQVA 295 Query 301 --SAGEDINMADAAATKVFGTERVQRAGRLAEEIVGKYGNPAEPDTAELLRWLDAQTKRN 358 SA + +ADA+ATKVF +E +QR GR EE+V ++G+ A+PDTAEL WLD KRN Sbjct 296 VSSASAPVGVADASATKVFSSEAIQRIGRSLEEVVARHGDLADPDTAELAEWLDLTAKRN 355 Query 359 LVITFGGGVNEVMREMIAASGLKVPRVPR 387 +V+TFGGGV+E+ RE+IA+ GL +PRVPR Sbjct 356 IVLTFGGGVSEIQRELIASIGLGLPRVPR 384 >gi|300784416|ref|YP_003764707.1| acyl-CoA dehydrogenase [Amycolatopsis mediterranei U32] gi|299793930|gb|ADJ44305.1| acyl-CoA dehydrogenase [Amycolatopsis mediterranei U32] Length=387 Score = 536 bits (1381), Expect = 2e-150, Method: Compositional matrix adjust. Identities = 264/389 (68%), Positives = 316/389 (82%), Gaps = 7/389 (1%) Query 1 MFIDLTPEQRQLQAEIRQYFSNLISPDERTEMEKDRHGPAYRAVIRRMGRDGRLGVGWPK 60 M ++LT QRQL+AE+R+YF+ LISP+ER M ++RHGP +R ++RRMGRDGRLGVGWP Sbjct 4 MHVELTTAQRQLRAELREYFAGLISPEERRAMRRERHGPVFREIVRRMGRDGRLGVGWPV 63 Query 61 EFGGLGFGPIEQQIFVNEAHRADVPLPAVTLQTVGPTLQAHGSELQKKKFLPAILAGEAH 120 E+GG GFG IEQ +FV+EA RADV LP+VTLQTVGPTLQ G++ Q+ FLP ILAGE H Sbjct 64 EYGGQGFGGIEQHLFVDEAARADVQLPSVTLQTVGPTLQEFGTDEQRSFFLPKILAGEIH 123 Query 121 FAIGYTEPEAGTDLASLRTTAVRDGDHYIVNGQKVFTTGAHDADYIWLACRTDPNAAKHK 180 FAIGY+EPEAGTDLA+LRTTAVRDGD Y+VNGQK+FTTG HDADY+WLA RT P+A KHK Sbjct 124 FAIGYSEPEAGTDLAALRTTAVRDGDEYVVNGQKIFTTGGHDADYVWLAVRTAPDAPKHK 183 Query 181 GISILIVDTKDPGYSWTPIILADGAHHTNATYYNDVRVPVDMLVGKENDGWRLITTQLNN 240 GISILIVDT+DPGYSWTPII DGAHH NATYY+DVRVPV+ LVG+EN GWRLITTQLN+ Sbjct 184 GISILIVDTRDPGYSWTPIITCDGAHHVNATYYSDVRVPVNRLVGQENAGWRLITTQLNH 243 Query 241 ERVMLGPAGRFASIYDRVHAWASVPGGNGVTPIDHDDVKRALGEIRAIWRINELLNWQVA 300 ERVMLGPAGR +YDRV AWAS G +D DV+ L E A+ R+NELLNWQVA Sbjct 244 ERVMLGPAGRIGGLYDRVRAWASAHG-----LLDLADVRAVLAEALAVTRVNELLNWQVA 298 Query 301 --SAGEDINMADAAATKVFGTERVQRAGRLAEEIVGKYGNPAEPDTAELLRWLDAQTKRN 358 SA + +ADA+ATKVF +E +QR GR EE+V ++G+ A+PDTAEL WLD KRN Sbjct 299 VSSASAPVGVADASATKVFSSEAIQRIGRSLEEVVARHGDLADPDTAELAEWLDLTAKRN 358 Query 359 LVITFGGGVNEVMREMIAASGLKVPRVPR 387 +V+TFGGGV+E+ RE+IA+ GL +PRVPR Sbjct 359 IVLTFGGGVSEIQRELIASIGLGLPRVPR 387 >gi|319948638|ref|ZP_08022762.1| acyl-CoA dehydrogenase domain protein [Dietzia cinnamea P4] gi|319437719|gb|EFV92715.1| acyl-CoA dehydrogenase domain protein [Dietzia cinnamea P4] Length=783 Score = 516 bits (1329), Expect = 2e-144, Method: Compositional matrix adjust. Identities = 245/389 (63%), Positives = 306/389 (79%), Gaps = 4/389 (1%) Query 2 FIDLTPEQRQLQAEIRQYFSNLISPDERTEMEKDRHGPAYRAVIRRMGRDGRLGVGWPKE 61 FIDLT EQR LQAE+R+YFS LISP+E ++ RHG Y +I+RMGRDG LGVGWP E Sbjct 396 FIDLTAEQRALQAELREYFSTLISPEEAADIATTRHGDTYAEIIKRMGRDGWLGVGWPTE 455 Query 62 FGGLGFGPIEQQIFVNEAHRADVPLPAVTLQTVGPTLQAHGSELQKKKFLPAILAGEAHF 121 +GG GFG IEQQIF NEA RADVPLP+VTLQTVGPTLQ +G+E QK+KFLP IL G HF Sbjct 456 YGGKGFGHIEQQIFTNEATRADVPLPSVTLQTVGPTLQKYGTEKQKEKFLPGILDGTIHF 515 Query 122 AIGYTEPEAGTDLASLRTTAVRD---GDHYIVNGQKVFTTGAHDADYIWLACRTDPNAAK 178 AIGY+EP+AGTDLA+LRTTA +D GD +I+NGQK++TTG H ADYIWLA RT ++ Sbjct 516 AIGYSEPDAGTDLAALRTTARKDEATGD-WIINGQKMWTTGGHHADYIWLAARTGTPDSR 574 Query 179 HKGISILIVDTKDPGYSWTPIILADGAHHTNATYYNDVRVPVDMLVGKENDGWRLITTQL 238 H+G++I IVDT DPG+S+TPII DGAHH NATYY+DVRVP DM+VG+ + GW+++TTQL Sbjct 575 HRGLTIFIVDTTDPGFSFTPIITCDGAHHVNATYYSDVRVPADMVVGEVDGGWKMLTTQL 634 Query 239 NNERVMLGPAGRFASIYDRVHAWASVPGGNGVTPIDHDDVKRALGEIRAIWRINELLNWQ 298 N+ERVML P+GR YD + AWA G +GV +D +V+R L EI AI R+NELLNWQ Sbjct 635 NHERVMLAPSGRPGGYYDELAAWARGTGADGVRHLDRPEVRRGLAEIFAIVRLNELLNWQ 694 Query 299 VASAGEDINMADAAATKVFGTERVQRAGRLAEEIVGKYGNPAEPDTAELLRWLDAQTKRN 358 V+S G++ +M D+AA+KVF TE++Q GR+ EE++G++G+P +PDTA L RW D KRN Sbjct 695 VSSTGDNPSMGDSAASKVFSTEKIQHVGRIVEELLGRFGDPTDPDTAALHRWFDMMNKRN 754 Query 359 LVITFGGGVNEVMREMIAASGLKVPRVPR 387 +VITFGGGVNEVMRE++ GL +PR R Sbjct 755 VVITFGGGVNEVMRELVCMGGLGMPRTAR 783 >gi|333918578|ref|YP_004492159.1| acyl-CoA dehydrogenase [Amycolicicoccus subflavus DQS3-9A1] gi|333480799|gb|AEF39359.1| Acyl-CoA dehydrogenase [Amycolicicoccus subflavus DQS3-9A1] Length=353 Score = 512 bits (1318), Expect = 4e-143, Method: Compositional matrix adjust. Identities = 248/358 (70%), Positives = 289/358 (81%), Gaps = 7/358 (1%) Query 32 MEKDRHGPAYRAVIRRMGRDGRLGVGWPKEFGGLGFGPIEQQIFVNEAHRADVPLPAVTL 91 M +RHGP +R ++RRMG+DG LGVGWP+EFGG GFG IEQ IFV+EA RADV LP+VTL Sbjct 1 MRVERHGPVFRNIVRRMGQDGWLGVGWPREFGGHGFGAIEQHIFVDEATRADVQLPSVTL 60 Query 92 QTVGPTLQAHGSELQKKKFLPAILAGEAHFAIGYTEPEAGTDLASLRTTAVRDGDHYIVN 151 QTVGPTLQ +G+E QK++FLP ILAGE HFAIGYTEPEAGTDLA+LRTTAV DGD+YIVN Sbjct 61 QTVGPTLQTYGTEEQKQRFLPKILAGEVHFAIGYTEPEAGTDLAALRTTAVLDGDYYIVN 120 Query 152 GQKVFTTGAHDADYIWLACRTDPNAAKHKGISILIVDTKDPGYSWTPIILADGAHHTNAT 211 GQK+FTTGAHDADYIWLA RTDP A KHKGISILIVDT DPG+SWTPII DGAHH NAT Sbjct 121 GQKIFTTGAHDADYIWLAVRTDPKAPKHKGISILIVDTSDPGFSWTPIITCDGAHHVNAT 180 Query 212 YYNDVRVPVDMLVGKENDGWRLITTQLNNERVMLGPAGRFASIYDRVHAWASVPGGNGVT 271 YYNDVRVP MLVG+EN GW+LITTQLN+ERVMLGPAGR ++YDRV WA + Sbjct 181 YYNDVRVPSSMLVGEENKGWKLITTQLNHERVMLGPAGRIGAVYDRVREWA-----HSND 235 Query 272 PIDHDDVKRALGEIRAIWRINELLNWQVAS--AGEDINMADAAATKVFGTERVQRAGRLA 329 + H DV+ AL +A RINELLNWQVA+ A + +++ADA+ATKVFG+E++Q+ G Sbjct 236 LVQHSDVRAALARTKAALRINELLNWQVAAADASQAVDVADASATKVFGSEQIQKIGASL 295 Query 330 EEIVGKYGNPAEPDTAELLRWLDAQTKRNLVITFGGGVNEVMREMIAASGLKVPRVPR 387 EEIV +YGN +P T EL WLD KRNLV+TFGGGVNE+ RE+IA GL +PRV R Sbjct 296 EEIVARYGNFDDPATVELAEWLDITAKRNLVLTFGGGVNEIQRELIATMGLGLPRVIR 353 >gi|145595203|ref|YP_001159500.1| acyl-CoA dehydrogenase domain-containing protein [Salinispora tropica CNB-440] gi|145304540|gb|ABP55122.1| acyl-CoA dehydrogenase domain protein [Salinispora tropica CNB-440] Length=380 Score = 511 bits (1316), Expect = 8e-143, Method: Compositional matrix adjust. Identities = 251/387 (65%), Positives = 301/387 (78%), Gaps = 7/387 (1%) Query 1 MFIDLTPEQRQLQAEIRQYFSNLISPDERTEMEKDRHGPAYRAVIRRMGRDGRLGVGWPK 60 MFIDLT EQ L+A +R Y + ++SP ER + ++RHG YR +IRR+GRDG LG+G+P Sbjct 1 MFIDLTEEQHALRARLRAYLAGVLSPGERAILLRERHGVVYRELIRRLGRDGWLGLGFPA 60 Query 61 EFGGLGFGPIEQQIFVNEAHRADVPLPAVTLQTVGPTLQAHGSELQKKKFLPAILAGEAH 120 FGG G GP+EQQIFVNEA RADVPLPAVTLQTV PTL AHGS Q+ FLP IL+GE H Sbjct 61 RFGGGGLGPVEQQIFVNEAARADVPLPAVTLQTVAPTLLAHGSPEQQDFFLPRILSGELH 120 Query 121 FAIGYTEPEAGTDLASLRTTAVRDGDHYIVNGQKVFTTGAHDADYIWLACRTDPNAAKHK 180 FAIGYTEPEAGTDLA+LRT AVRDGD Y+VNGQK FTTGAHDADY+WLACRT+P+A +H Sbjct 121 FAIGYTEPEAGTDLAALRTRAVRDGDAYVVNGQKTFTTGAHDADYLWLACRTNPDAPRHH 180 Query 181 GISILIVDTKDPGYSWTPIILADGAHHTNATYYNDVRVPVDMLVGKENDGWRLITTQLNN 240 G+SILIVDTK PGYSWTPII DGAHH NA Y DVRVP VG ENDGWRL+TTQLN+ Sbjct 181 GLSILIVDTKHPGYSWTPIITCDGAHHVNAVYLTDVRVPTARRVGAENDGWRLLTTQLNH 240 Query 241 ERVMLGPAGRFASIYDRVHAWASVPGGNGVTPIDHDDVKRALGEIRAIWRINELLNWQVA 300 ERVMLGPAGRFA++ +RVH WA + +D DV+R L + A R+NELLNW + Sbjct 241 ERVMLGPAGRFAALAERVHDWAY-----SRSLLDAPDVRRVLARVAACQRVNELLNW--S 293 Query 301 SAGEDINMADAAATKVFGTERVQRAGRLAEEIVGKYGNPAEPDTAELLRWLDAQTKRNLV 360 + G++ N ADA+ TKVF +E + G+ EE+V + G+P++P TAELL WLD Q KRNLV Sbjct 294 ATGDEPNPADASVTKVFSSEWLLWLGQELEEVVWRRGDPSDPATAELLTWLDVQAKRNLV 353 Query 361 ITFGGGVNEVMREMIAASGLKVPRVPR 387 +TFGGGVNE+ RE+IA+ GL +PRVPR Sbjct 354 LTFGGGVNEIQRELIASVGLGLPRVPR 380 >gi|119717014|ref|YP_923979.1| acyl-CoA dehydrogenase domain-containing protein [Nocardioides sp. JS614] gi|119537675|gb|ABL82292.1| acyl-CoA dehydrogenase domain protein [Nocardioides sp. JS614] Length=743 Score = 502 bits (1292), Expect = 4e-140, Method: Compositional matrix adjust. Identities = 244/392 (63%), Positives = 304/392 (78%), Gaps = 12/392 (3%) Query 3 IDLTPEQRQLQAEIRQYFSNLISPDERTEM-----EKDRHGPAYRAVIRRMGRDGRLGVG 57 ++L +QR L+AE+R+YF+ L +E E+ +DRHG Y+ VIR++G DG +G+G Sbjct 357 LELGADQRALKAELREYFTGLAGREEHEEICQGTGPRDRHGETYQRVIRQLGADGWMGIG 416 Query 58 WPKEFGGLGFGPIEQQIFVNEAHRADVPLPAVTLQTVGPTLQAHGSELQKKKFLPAILAG 117 WP E+GG G G IEQ IF NEA RADV LPAVTLQTVGPTL +G++ QK FL IL G Sbjct 417 WPTEYGGHGLGEIEQTIFANEAQRADVHLPAVTLQTVGPTLIRYGTQKQKDLFLKRILEG 476 Query 118 EAHFAIGYTEPEAGTDLASLRTTAVRDGDHYIVNGQKVFTTGAHDADYIWLACRTDPNAA 177 + HFAIGY+EP+AGTDLASLRTTA RDGDHY+VNGQK++TTG H ADYIWLACRTDP+A Sbjct 477 DVHFAIGYSEPDAGTDLASLRTTARRDGDHYVVNGQKLWTTGGHQADYIWLACRTDPDAP 536 Query 178 KHKGISILIVDTKDPGYSWTPIILADGAHHTNATYYNDVRVPVDMLVGKENDGWRLITTQ 237 KHKGISIL+VDT+DPGYSWTPII ADG+HH NATY+NDVRVPVDMLVG+EN GW+LITTQ Sbjct 537 KHKGISILMVDTRDPGYSWTPIITADGSHHVNATYFNDVRVPVDMLVGEENQGWKLITTQ 596 Query 238 LNNERVMLGPAGRFASIYDRVHAWASVPGGNGVTPIDHDDVKRALGEIRAIWRINELLNW 297 LN+ERVMLGPAGR + DRV WA+ G +D DV+R +GE+ A++R+NELLNW Sbjct 597 LNHERVMLGPAGRLEGLRDRVAEWATKAG-----VVDRPDVRRTMGEVTAVFRVNELLNW 651 Query 298 QVASAGE--DINMADAAATKVFGTERVQRAGRLAEEIVGKYGNPAEPDTAELLRWLDAQT 355 +VA A +I++ DA+++KVF + VQ +IV +YG+PA+ +TA L+R+LD Q Sbjct 652 EVARAAAVGEISVGDASSSKVFAADEVQHLAADLADIVHRYGDPADEETAYLVRYLDGQA 711 Query 356 KRNLVITFGGGVNEVMREMIAASGLKVPRVPR 387 KRNLV+TFGGGV EV RE+IA GL +PRVPR Sbjct 712 KRNLVLTFGGGVQEVQRELIAMFGLGLPRVPR 743 Score = 37.7 bits (86), Expect = 3.8, Method: Compositional matrix adjust. Identities = 35/107 (33%), Positives = 43/107 (41%), Gaps = 7/107 (6%) Query 59 PKEFGGLGFGPIEQQIFVNEAHRADVPLPA-VTLQTVGPTLQAHGSELQKKKFLPAILAG 117 P+E GG G G E + + E V LP TL TL A GS Q+ LPA+ AG Sbjct 55 PEEQGGEGLGLREVAVLLRETGVHAVQLPVWETLCCGALTLAAAGSAEQRHVLLPAVAAG 114 Query 118 EAHFAIGYTEPEAG------TDLASLRTTAVRDGDHYIVNGQKVFTT 158 E E AG T A R T + G Y ++ T Sbjct 115 EKLLTPALREVGAGIPDRPATTYADGRVTGRKIGVTYADRSARLLVT 161 >gi|159038450|ref|YP_001537703.1| acyl-CoA dehydrogenase domain-containing protein [Salinispora arenicola CNS-205] gi|157917285|gb|ABV98712.1| acyl-CoA dehydrogenase domain protein [Salinispora arenicola CNS-205] Length=380 Score = 495 bits (1274), Expect = 6e-138, Method: Compositional matrix adjust. Identities = 243/387 (63%), Positives = 298/387 (78%), Gaps = 7/387 (1%) Query 1 MFIDLTPEQRQLQAEIRQYFSNLISPDERTEMEKDRHGPAYRAVIRRMGRDGRLGVGWPK 60 MFIDLT EQ L+A +R Y + ++SP+ER + ++RHG YR +IRR+GRDG LG+G+P Sbjct 1 MFIDLTEEQHALRARLRAYLAEVLSPEERAVLLRERHGAVYRDLIRRLGRDGWLGIGFPA 60 Query 61 EFGGLGFGPIEQQIFVNEAHRADVPLPAVTLQTVGPTLQAHGSELQKKKFLPAILAGEAH 120 FGG G G +EQQIFVNEA RADVPLP+VTLQTV PTL AHGS Q++ FLP ILAGE H Sbjct 61 HFGGGGLGHVEQQIFVNEAARADVPLPSVTLQTVAPTLLAHGSPEQQEFFLPRILAGEIH 120 Query 121 FAIGYTEPEAGTDLASLRTTAVRDGDHYIVNGQKVFTTGAHDADYIWLACRTDPNAAKHK 180 FAIGYTEPEAGTDLA+LRT AVRDGD Y+VNGQK FTTGAH+ADY+WLACRT+P+ ++H Sbjct 121 FAIGYTEPEAGTDLAALRTRAVRDGDTYVVNGQKTFTTGAHNADYLWLACRTNPDTSRHH 180 Query 181 GISILIVDTKDPGYSWTPIILADGAHHTNATYYNDVRVPVDMLVGKENDGWRLITTQLNN 240 G+SILIVDT PGY+WTPI+ DGAHH +A Y DVRVPV VG ENDGWRL+TTQLN+ Sbjct 181 GLSILIVDTDQPGYAWTPIVTCDGAHHVDAVYLTDVRVPVAQRVGAENDGWRLLTTQLNH 240 Query 241 ERVMLGPAGRFASIYDRVHAWASVPGGNGVTPIDHDDVKRALGEIRAIWRINELLNWQVA 300 ERVMLGPAGRF ++ +RV WA ++ DV+RAL + A R+NELLNW V Sbjct 241 ERVMLGPAGRFGALGERVRDWAY-----PRNLLEAPDVRRALARVGACLRVNELLNWWV- 294 Query 301 SAGEDINMADAAATKVFGTERVQRAGRLAEEIVGKYGNPAEPDTAELLRWLDAQTKRNLV 360 G++ N ADA+ TKVF +E + + G+ E++V + G+PA+P T ELL WLD Q KRNLV Sbjct 295 -IGDEPNPADASVTKVFSSEWLLQLGQELEDVVWRRGDPADPATVELLAWLDVQAKRNLV 353 Query 361 ITFGGGVNEVMREMIAASGLKVPRVPR 387 +TFGGGVNE+ RE+IA GL +PRVPR Sbjct 354 LTFGGGVNEIQRELIATVGLGLPRVPR 380 >gi|326331720|ref|ZP_08198008.1| putative acyl-CoA dehydrogenase [Nocardioidaceae bacterium Broad-1] gi|325950519|gb|EGD42571.1| putative acyl-CoA dehydrogenase [Nocardioidaceae bacterium Broad-1] Length=726 Score = 488 bits (1256), Expect = 7e-136, Method: Compositional matrix adjust. Identities = 247/391 (64%), Positives = 297/391 (76%), Gaps = 11/391 (2%) Query 3 IDLTPEQRQLQAEIRQYFSNLISPDERT----EMEKDRHGPAYRAVIRRMGRDGRLGVGW 58 ++LT QR L+AE+R YF+ L E E DRHGP Y+ +I+++G DG +GVGW Sbjct 341 LELTEAQRSLKAEVRAYFAGLSREGEPADPGPEGSWDRHGPTYQKLIKQLGDDGWMGVGW 400 Query 59 PKEFGGLGFGPIEQQIFVNEAHRADVPLPAVTLQTVGPTLQAHGSELQKKKFLPAILAGE 118 PKE+GG G G +EQ IF NEA ADV LPAVTLQTVGPTL +G++ QK+ FL ILAGE Sbjct 401 PKEYGGHGLGEVEQTIFANEAQYADVHLPAVTLQTVGPTLIRYGTDKQKQMFLNRILAGE 460 Query 119 AHFAIGYTEPEAGTDLASLRTTAVRDGDHYIVNGQKVFTTGAHDADYIWLACRTDPNAAK 178 HFAIGY+EPEAGTDLASLRTTA RDGDHY+VNGQK++TTG H ADYIWLA RTDP+A K Sbjct 461 VHFAIGYSEPEAGTDLASLRTTARRDGDHYVVNGQKLWTTGGHAADYIWLAVRTDPDAPK 520 Query 179 HKGISILIVDTKDPGYSWTPIILADGAHHTNATYYNDVRVPVDMLVGKENDGWRLITTQL 238 HKGISILIVDT DPG+SWTPII ADG+HH NATY+NDVRVP DMLVG+EN GW+LITTQL Sbjct 521 HKGISILIVDTTDPGFSWTPIITADGSHHVNATYFNDVRVPADMLVGEENQGWKLITTQL 580 Query 239 NNERVMLGPAGRFASIYDRVHAWASVPGGNGVTPIDHDDVKRALGEIRAIWRINELLNWQ 298 N+ERVMLGPAGR + DRV WA+ GVT D DV+ +G+ A++R+NELLNW Sbjct 581 NHERVMLGPAGRIEGLRDRVLRWATA---QGVT--DSPDVRSLIGKTTAVFRVNELLNWA 635 Query 299 VASAGE--DINMADAAATKVFGTERVQRAGRLAEEIVGKYGNPAEPDTAELLRWLDAQTK 356 VA A E +I +ADA+A+KVF ++VQ +V ++G+P EP T LL +LDAQ K Sbjct 636 VARAAEQGEIEVADASASKVFAADQVQHLLADLITLVHRHGDPGEPVTKSLLDYLDAQAK 695 Query 357 RNLVITFGGGVNEVMREMIAASGLKVPRVPR 387 RNLV+TFGGGV EV RE+IA GL +PRVPR Sbjct 696 RNLVLTFGGGVQEVQRELIAMFGLGMPRVPR 726 >gi|311744301|ref|ZP_07718105.1| acyl-CoA dehydrogenase domain protein [Aeromicrobium marinum DSM 15272] gi|311312474|gb|EFQ82387.1| acyl-CoA dehydrogenase domain protein [Aeromicrobium marinum DSM 15272] Length=733 Score = 486 bits (1251), Expect = 3e-135, Method: Compositional matrix adjust. Identities = 237/389 (61%), Positives = 298/389 (77%), Gaps = 7/389 (1%) Query 4 DLTPEQRQLQAEIRQYFSNLISPDERTEMEKDRHGPAYRAVIRRMGRDGRLGVGWPKEFG 63 +LT +R +AE R+Y S L+S +R EM +RHGPAY +I++MG DG +GVGWP+E+G Sbjct 347 ELTEAERTFKAEARRYLSGLVSDADREEMRANRHGPAYHRIIKQMGADGWMGVGWPEEYG 406 Query 64 GLGFGPIEQQIFVNEAHRADVPLPAVTLQTVGPTLQAHGSELQKKKFLPAILAGEAHFAI 123 G G G IEQQ+FVNEA RADV LP+VTLQTVGPTLQA G+++QKK FL I+AG+ HFAI Sbjct 407 GQGRGVIEQQVFVNEAARADVHLPSVTLQTVGPTLQAFGTDVQKKMFLSDIIAGDVHFAI 466 Query 124 GYTEPEAGTDLASLRTTAVRDGDHYIVNGQKVFTTGAHDADYIWLACRTDPNAAKHKGIS 183 GY+EP+AGTDLAS+RT+A RDGDHY+VNGQK++TTG H ADY+WLA RTDP A H+GIS Sbjct 467 GYSEPDAGTDLASMRTSARRDGDHYVVNGQKMWTTGGHAADYVWLAVRTDPEAPPHRGIS 526 Query 184 ILIVDTKDPGYSWTPIILADGAHHTNATYYNDVRVPVDMLVGKENDGWRLITTQLNNERV 243 +LIVDT+DPG+SWTPI+ +DG+HHTNATYYNDVRVPVDMLVG+EN GW+LIT QLN+ER+ Sbjct 527 VLIVDTRDPGFSWTPIVTSDGSHHTNATYYNDVRVPVDMLVGEENRGWQLITAQLNHERI 586 Query 244 MLGPAGRFASIYDRVHAWA---SVPGGNGVTPIDHDDVKRALGEIRAIWRINELLNWQV- 299 MLGPAGR + D V WA + P G V + V+ L A R+NELLNW V Sbjct 587 MLGPAGRVEGLRDLVRDWADGRTAPDGTPVLEVPW--VRDTLARATASLRVNELLNWAVA 644 Query 300 -ASAGEDINMADAAATKVFGTERVQRAGRLAEEIVGKYGNPAEPDTAELLRWLDAQTKRN 358 AS+ E +ADA+ +KVF ++ VQR G ++V YG+PA+P T L +LD+ +KRN Sbjct 645 RASSTERTTVADASTSKVFASDEVQRLGLALADVVTAYGDPADPATGRLAEYLDSTSKRN 704 Query 359 LVITFGGGVNEVMREMIAASGLKVPRVPR 387 LV++FGGGVNEV RE+IA GL +PRVPR Sbjct 705 LVLSFGGGVNEVQRELIAMFGLDLPRVPR 733 >gi|289752256|ref|ZP_06511634.1| LOW QUALITY PROTEIN: acyl-CoA dehydrogenase fadE29 [Mycobacterium tuberculosis T92] gi|289692843|gb|EFD60272.1| LOW QUALITY PROTEIN: acyl-CoA dehydrogenase fadE29 [Mycobacterium tuberculosis T92] Length=269 Score = 482 bits (1240), Expect = 5e-134, Method: Compositional matrix adjust. Identities = 239/246 (98%), Positives = 239/246 (98%), Gaps = 1/246 (0%) Query 142 VRDGDHYIVNGQKVFTTGAHDADYIWLACRTDPNAAKHKGISILIVDTKDPGYSWTPIIL 201 VRDGDHYIVNGQKVF AHDADYIWLACR DPNA KGISILIVDTKDPGYSWTPIIL Sbjct 25 VRDGDHYIVNGQKVFHHRAHDADYIWLACRHDPNALS-KGISILIVDTKDPGYSWTPIIL 83 Query 202 ADGAHHTNATYYNDVRVPVDMLVGKENDGWRLITTQLNNERVMLGPAGRFASIYDRVHAW 261 ADGAHHTNATYYNDVRVPVDMLVGKENDGWRLITTQLNNERVMLGPAGRFASIYDRVHAW Sbjct 84 ADGAHHTNATYYNDVRVPVDMLVGKENDGWRLITTQLNNERVMLGPAGRFASIYDRVHAW 143 Query 262 ASVPGGNGVTPIDHDDVKRALGEIRAIWRINELLNWQVASAGEDINMADAAATKVFGTER 321 ASVPGGNGVTPIDHDDVKRALGEIRAIWRINELLNWQVASAGEDINMADAAATKVFGTER Sbjct 144 ASVPGGNGVTPIDHDDVKRALGEIRAIWRINELLNWQVASAGEDINMADAAATKVFGTER 203 Query 322 VQRAGRLAEEIVGKYGNPAEPDTAELLRWLDAQTKRNLVITFGGGVNEVMREMIAASGLK 381 VQRAGRLAEEIVGKYGNPAEPDTAELLRWLDAQTKRNLVITFGGGVNEVMREMIAASGLK Sbjct 204 VQRAGRLAEEIVGKYGNPAEPDTAELLRWLDAQTKRNLVITFGGGVNEVMREMIAASGLK 263 Query 382 VPRVPR 387 VPRVPR Sbjct 264 VPRVPR 269 >gi|271969394|ref|YP_003343590.1| acyl-CoA dehydrogenase protein [Streptosporangium roseum DSM 43021] gi|270512569|gb|ACZ90847.1| acyl-CoA dehydrogenase protein [Streptosporangium roseum DSM 43021] Length=384 Score = 474 bits (1219), Expect = 1e-131, Method: Compositional matrix adjust. Identities = 229/389 (59%), Positives = 290/389 (75%), Gaps = 7/389 (1%) Query 1 MFIDLTPEQRQLQAEIRQYFSNLISPDERTEMEKDRHGPAYRAVIRRMGRDGRLGVGWPK 60 M IDLTPEQR+L+ E+R YF ++ ++R ++ D G AY R +GRDG+LG+GWPK Sbjct 1 MLIDLTPEQRRLRDELRDYFRGCLTAEDRKKISTDPFGQAYMEHCRNLGRDGKLGLGWPK 60 Query 61 EFGGLGFGPIEQQIFVNEAHRADVPLPAVTLQTVGPTLQAHGSELQKKKFLPAILAGEAH 120 E+GG G+GP+EQQIF NE RA+VP P +T+QTVGPTL +G+ QK+ FLP ILAGE H Sbjct 61 EYGGGGYGPLEQQIFANEIARAEVPYPIITVQTVGPTLMQYGTAAQKEFFLPRILAGECH 120 Query 121 FAIGYTEPEAGTDLASLRTTAVRDGDHYIVNGQKVFTTGAHDADYIWLACRTDPNAAKHK 180 FAIGY+EP AGTDLASLRTTAVRDGDHY+VNGQK+FT+GAH + YIWLA RTDP A KH+ Sbjct 121 FAIGYSEPGAGTDLASLRTTAVRDGDHYVVNGQKIFTSGAHYSQYIWLAARTDPAAKKHR 180 Query 181 GISILIVDTKDPGYSWTPIILADGAHHTNATYYNDVRVPVDMLVGKENDGWRLITTQLNN 240 GI+++IVD DPG+SWTPI DG HHTN+TYY DVRVPVDM+VG+EN GW LI QLN+ Sbjct 181 GITMMIVDCADPGFSWTPITTMDGRHHTNSTYYADVRVPVDMVVGEENKGWDLIVNQLNH 240 Query 241 ERVMLGPAGRFASIYDRVHAWASVPGGNGVTPIDHDDVKRALGEIRAIWRINELLNWQVA 300 ERV LGPAG A YDR WA G I+ V+RALG + A +R NELLNWQVA Sbjct 241 ERVTLGPAGNIAHTYDRFLRWARDTG-----LIEEPAVRRALGRVYAYFRTNELLNWQVA 295 Query 301 SAGED--INMADAAATKVFGTERVQRAGRLAEEIVGKYGNPAEPDTAELLRWLDAQTKRN 358 + + + DA+ATK++G+ER+Q GR+ +++ ++G+PA+P TA+ + LD K Sbjct 296 ANMDLGWLGAPDASATKIYGSERMQEVGRIVGDVLARFGDPADPATADFVDRLDHGVKGA 355 Query 359 LVITFGGGVNEVMREMIAASGLKVPRVPR 387 +V+TFGGGVNEV RE+IA GL +PR PR Sbjct 356 IVLTFGGGVNEVQRELIAMLGLSLPRPPR 384 >gi|269127845|ref|YP_003301215.1| acyl-CoA dehydrogenase domain-containing protein [Thermomonospora curvata DSM 43183] gi|268312803|gb|ACY99177.1| acyl-CoA dehydrogenase domain protein [Thermomonospora curvata DSM 43183] Length=390 Score = 462 bits (1189), Expect = 4e-128, Method: Compositional matrix adjust. Identities = 223/390 (58%), Positives = 289/390 (75%), Gaps = 3/390 (0%) Query 1 MFIDLTPEQRQLQAEIRQYFSNLISPDERTEMEKDRHGPAYRAVIRRMGRDGRLGVGWPK 60 MFIDLT +Q++L+AE+R+YF ++ ++R + D GPAY +R+G G LGVG PK Sbjct 1 MFIDLTDQQQRLRAELREYFRTCLTDEQRAAIAADPFGPAYIEHCKRLGAAGMLGVGLPK 60 Query 61 EFGGLGFGPIEQQIFVNEAHRADVPLPAVTLQTVGPTLQAHGSELQKKKFLPAILAGEAH 120 E+GG GFGP+EQQIFVNE RA+VP P +TL TV PT+ +G+E QK+ FLP I+ GE H Sbjct 61 EYGGRGFGPLEQQIFVNEITRAEVPYPLITLNTVAPTILQYGTEEQKEFFLPKIVRGECH 120 Query 121 FAIGYTEPEAGTDLASLRTTAVRDGDHYIVNGQKVFTTGAHDADYIWLACRTDPNAAKHK 180 FAIGY+EP AGTDLA+LRTTAVRDGDHY+VNGQK+FT+GA ADYIWLA RTDP A +H+ Sbjct 121 FAIGYSEPGAGTDLAALRTTAVRDGDHYVVNGQKIFTSGAQTADYIWLAARTDPQAERHR 180 Query 181 GISILIVDTKDPGYSWTPIILADGAHHTNATYYNDVRVPVDMLVGKENDGWRLITTQLNN 240 GISILIVD +DPG+SWTPII DG HHTNATYY DV+VP DML+G+EN GW LI QLN+ Sbjct 181 GISILIVDCRDPGFSWTPIITMDGQHHTNATYYQDVKVPADMLIGEENKGWDLIVNQLNH 240 Query 241 ERVMLGPAGRFASIYDRVHAWA-SVPGGNGVTPIDHDDVKRALGEIRAIWRINELLNWQV 299 ERV LGPAG + DR WA + G +G I+ +V+RAL + A R+NELLNWQV Sbjct 241 ERVTLGPAGNIGRLRDRFVHWARTTAGADGRPLIERPEVRRALARVHARLRVNELLNWQV 300 Query 300 ASAGED--INMADAAATKVFGTERVQRAGRLAEEIVGKYGNPAEPDTAELLRWLDAQTKR 357 A+ + ++ A+ATK++G+E++ GR+ E + ++G+P +P TA+L+ +D K Sbjct 301 AAEADLGWLSAPGASATKIYGSEQMMEVGRIIGETLARHGDPGDPATADLIAKVDRAVKG 360 Query 358 NLVITFGGGVNEVMREMIAASGLKVPRVPR 387 LV+TFGGGVNE+ RE+IA GL +PR PR Sbjct 361 ALVLTFGGGVNEIQREIIAMLGLGLPRAPR 390 >gi|296170099|ref|ZP_06851699.1| probable acyl-CoA dehydrogenase [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295895241|gb|EFG74953.1| probable acyl-CoA dehydrogenase [Mycobacterium parascrofulaceum ATCC BAA-614] Length=395 Score = 358 bits (920), Expect = 7e-97, Method: Compositional matrix adjust. Identities = 192/390 (50%), Positives = 254/390 (66%), Gaps = 5/390 (1%) Query 1 MFIDLTPEQRQLQAEIRQYFSNLISPDERTEM-EKDRHGPAYRAVIRRMGRDGRLGVGWP 59 M ++ +PEQ +L+AEIR +++P+ R + E+ GPA R +R + LGVGWP Sbjct 1 MDLEYSPEQERLRAEIRATLERVMTPERRAAVDERMEGGPAVRECVRALAAANLLGVGWP 60 Query 60 KEFGGLGFGPIEQQIFVNEAHRADVPLPAVTLQTVGPTLQAHGSELQKKKFLPAILAGEA 119 KE+GG GF IEQ IF EA R + P+P VTL TVGPTL G+E QK+KFLPAIL G Sbjct 61 KEYGGRGFSAIEQFIFSEEARRVNAPVPLVTLNTVGPTLMQCGTEEQKRKFLPAILDGSV 120 Query 120 HFAIGYTEPEAGTDLASLRTTAVRDGDHYIVNGQKVFTTGAHDADYIWLACRTDPNAAKH 179 FAIGY+EP AG+DLAS+RTTAVRDGD Y++NGQK+FT+GA ADYIWLA RTDP+A KH Sbjct 121 EFAIGYSEPGAGSDLASVRTTAVRDGDEYVINGQKMFTSGAAYADYIWLAARTDPDAKKH 180 Query 180 KGISILIVDTKDPGYSWTPIILADGAHHTNATYYNDVRVPVDMLVGKENDGWRLITTQLN 239 KGISIL+V T PG+SW P+ G T T+Y+DVRVP LVG EN GW+LITTQLN Sbjct 181 KGISILMVPTSSPGFSWQPLHTMPGI-STFYTFYDDVRVPASALVGGENQGWQLITTQLN 239 Query 240 NERVMLGPAGRFASIYDRVHAWASVPGGNGVTPIDHDDVKRALGEIRAIWRINELLNWQV 299 ER LG G +++R WA+ +G ID + AL + A +L+N +V Sbjct 240 FERAALGNLGALEPLFERTLQWATDTELDGRRVIDQPWAQLALARVEAQVAAYKLVNLRV 299 Query 300 ASAGED--INMADAAATKVFGTERVQRAGRLAEEIVGKYGNPAEPDTAELLRWLDAQTKR 357 +A ++M +A+A KVFGTE Q+ R E++ + G D A L L++ ++ Sbjct 300 NAAMTKGVLSMGEASAAKVFGTELTQQVARQLLEVLDRNGVRRGAD-APLRGALESAYRQ 358 Query 358 NLVITFGGGVNEVMREMIAASGLKVPRVPR 387 ++ TFGGG NE+ R++IA +GL +PR PR Sbjct 359 AVINTFGGGANEIQRDIIAMAGLGMPRAPR 388 >gi|146217146|gb|ABQ10637.1| acyl-CoA-dehydrogenase [Pseudomonas sp. Chol1] Length=389 Score = 357 bits (915), Expect = 3e-96, Method: Compositional matrix adjust. Identities = 191/392 (49%), Positives = 260/392 (67%), Gaps = 8/392 (2%) Query 1 MFIDLTPEQRQLQAEIRQYFSNLISPDERTEMEKDRHGPAYRAVIRRMGRDGRLGVGWPK 60 MF+DLT EQR L+ ++R YF+ LISP+ R +M G YR +IR+MG DG L VGWPK Sbjct 1 MFVDLTEEQRALRLKVRDYFNQLISPELRMQMRGTEGGEEYRRLIRQMGADGWLAVGWPK 60 Query 61 EFGGLGFGPIEQQIFVNEAHRADVPLPAVTLQTVGPTLQAHGSELQKKKFLPAILAGEAH 120 E+GG G+ EQ IF EA+ A PLP VT+ TVGP L HG+ LQK++FLP I AGE H Sbjct 61 EYGGQGYAATEQLIFFEEANIAGAPLPFVTISTVGPALMEHGTPLQKERFLPGIAAGEIH 120 Query 121 FAIGYTEPEAGTDLASLRTTAVRDGDHYIVNGQKVFTTGAHDADYIWLACRTDPNAAKHK 180 F+IGY+EP AGTDLA+L+T A +GDH++VNG K++T+GA +AD+IWLA RT+P +HK Sbjct 121 FSIGYSEPGAGTDLATLKTHARLEGDHFVVNGNKLWTSGAGNADFIWLAARTNPEEPRHK 180 Query 181 GISILIVDTKDPGYSWTPIILADGAHHTNATYYNDVRVPVDMLVGKENDGWRLITTQLNN 240 GISILIVDT+D G+S T ++ + T ATYY++V+VP +MLVG+ + GWRLIT+QLN+ Sbjct 181 GISILIVDTRDEGFSHT--LIPTCSMPTTATYYDNVKVPKEMLVGELHQGWRLITSQLNH 238 Query 241 ERVMLGPAG-RFASIYDRVHAWASVPGGNGVTPIDHDDVKRALGEIRAIWRINELLNWQV 299 ER+ LG G + ++ RV+ WA NG D V++ L E A L+N+++ Sbjct 239 ERLGLGAWGDKVVGLFRRVYLWARTRDENGRRATDQPWVRQLLAECYARTEAMRLINFRI 298 Query 300 ASAGED--INMADAAATKVFGTERVQRAGRLAEEIVGKYG--NPAEPDTAELLRWLDAQT 355 A+ E +++A A+ TKV+G+E V R E+ G G P A LL L+ + Sbjct 299 AAELEQGRMDVALASTTKVYGSESVIEILRKLTEVAGASGLVRPGS-SAAFLLGELEYEV 357 Query 356 KRNLVITFGGGVNEVMREMIAASGLKVPRVPR 387 + + TFGGGVNE+ RE+IA GL +PR R Sbjct 358 REAVTQTFGGGVNELQRELIAQFGLGMPRTSR 389 >gi|157961963|ref|YP_001501997.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella pealeana ATCC 700345] gi|157846963|gb|ABV87462.1| acyl-CoA dehydrogenase domain protein [Shewanella pealeana ATCC 700345] Length=389 Score = 355 bits (910), Expect = 1e-95, Method: Compositional matrix adjust. Identities = 186/388 (48%), Positives = 262/388 (68%), Gaps = 6/388 (1%) Query 1 MFIDLTPEQRQLQAEIRQYFSNLISPDERTEMEKDRHGPAYRAVIRRMGRDGRLGVGWPK 60 M+IDLTPEQ QL+ +IR YF+ L++P+ + ++ G YRAVI ++G+DG L VGWPK Sbjct 1 MYIDLTPEQHQLRLKIRDYFTKLMTPELKAKLRGKEGGDDYRAVIEQIGKDGWLAVGWPK 60 Query 61 EFGGLGFGPIEQQIFVNEAHRADVPLPAVTLQTVGPTLQAHGSELQKKKFLPAILAGEAH 120 EFGG G+ EQ IF EA+ A PLP VT+ TVGP L HG+E QK+KFLP I GE Sbjct 61 EFGGQGYQATEQLIFFEEANIAGAPLPFVTISTVGPALMEHGTEYQKQKFLPGIARGEII 120 Query 121 FAIGYTEPEAGTDLASLRTTAVRDGDHYIVNGQKVFTTGAHDADYIWLACRTDPNAAKHK 180 FAIGY+EP AG+DLA+L T A + + ++VNG K++T+GA ADYIWLA RTDP A+HK Sbjct 121 FAIGYSEPNAGSDLATLTTAAKVEQEGFVVNGNKMWTSGAESADYIWLAARTDPEQARHK 180 Query 181 GISILIVDTKDPGYSWTPIILADGAHHTNATYYNDVRVPVDMLVGKENDGWRLITTQLNN 240 GISI+IVDT+ PG+S T ++ ++ T ATYY+DV VP +MLVG+ N GW+LIT+QLN+ Sbjct 181 GISIMIVDTQTPGFSHT--VIPTCSNPTAATYYDDVVVPKEMLVGELNRGWKLITSQLNH 238 Query 241 ERVMLGP-AGRFASIYDRVHAWASVPGGNGVTPIDHDDVKRALGEIRAIWRINELLNWQV 299 ER+ LG + + S+Y +V+ WA +G D+ V+ AL + + L+N+++ Sbjct 239 ERLGLGAWSDKVVSLYRKVYLWAKAKDEHGRCATDNPWVRSALAKCYSRLEAMRLINFRI 298 Query 300 ASAGE--DINMADAAATKVFGTERVQRAGRLAEEIVGKYGNPAEPDTAELLRW-LDAQTK 356 A+ E +++A A+ TKV+G+E RL ++IVG G E +A LL L+ + + Sbjct 299 AADLEQGQMDVALASITKVYGSESAIEILRLLQDIVGSNGMVREGSSASLLLGELEYEVR 358 Query 357 RNLVITFGGGVNEVMREMIAASGLKVPR 384 ++ +TFGGG NE+ RE+IA GL +PR Sbjct 359 ASVTLTFGGGTNEIQRELIAQFGLGLPR 386 >gi|167624038|ref|YP_001674332.1| acyl-CoA dehydrogenase domain-containing protein [Shewanella halifaxensis HAW-EB4] gi|167354060|gb|ABZ76673.1| acyl-CoA dehydrogenase domain protein [Shewanella halifaxensis HAW-EB4] Length=389 Score = 353 bits (907), Expect = 2e-95, Method: Compositional matrix adjust. Identities = 185/388 (48%), Positives = 261/388 (68%), Gaps = 6/388 (1%) Query 1 MFIDLTPEQRQLQAEIRQYFSNLISPDERTEMEKDRHGPAYRAVIRRMGRDGRLGVGWPK 60 M+IDLTPEQ QL+ +IR YF+ L++P+ ++++ G YRAVI ++G+DG L VGWPK Sbjct 1 MYIDLTPEQHQLRLKIRDYFTELMTPELKSKLRGKEGGDDYRAVIEQIGKDGWLAVGWPK 60 Query 61 EFGGLGFGPIEQQIFVNEAHRADVPLPAVTLQTVGPTLQAHGSELQKKKFLPAILAGEAH 120 EFGG G+ EQ IF EA+ A PLP VT+ TVGP L HG+E QK+KFLP I GE Sbjct 61 EFGGQGYQATEQLIFFEEANIAGAPLPFVTISTVGPALMQHGTEEQKQKFLPGIAKGEII 120 Query 121 FAIGYTEPEAGTDLASLRTTAVRDGDHYIVNGQKVFTTGAHDADYIWLACRTDPNAAKHK 180 FAIGY+EP AG+DLA+L T+A + + +IVNG K++T+GA ADYIWLA RTDP A+HK Sbjct 121 FAIGYSEPNAGSDLATLTTSAKVEQECFIVNGNKMWTSGAESADYIWLAARTDPEQARHK 180 Query 181 GISILIVDTKDPGYSWTPIILADGAHHTNATYYNDVRVPVDMLVGKENDGWRLITTQLNN 240 GISI++VDTK G+S T ++ ++ T ATYY+DV VP +MLVG+ N GW+LIT+QLN+ Sbjct 181 GISIMVVDTKTSGFSHT--VIPTCSNPTAATYYDDVIVPKEMLVGELNHGWKLITSQLNH 238 Query 241 ERVMLGP-AGRFASIYDRVHAWASVPGGNGVTPIDHDDVKRALGEIRAIWRINELLNWQV 299 ER+ LG + + S+Y + + WA G +D+ V+ AL + L+N+++ Sbjct 239 ERLGLGAWSDKVVSLYRKAYLWAKAKDEQGRCAMDNPWVRSALARCYSRLEAMRLINFRI 298 Query 300 ASAGED--INMADAAATKVFGTERVQRAGRLAEEIVGKYGNPAEPDTAELLRW-LDAQTK 356 A+ E +++A A+ TKV+G+E RL ++IVG G E +A LL L+ + + Sbjct 299 AADLEQGKMDVALASITKVYGSESAIEILRLLQDIVGSNGMVREGSSASLLLGELEYEVR 358 Query 357 RNLVITFGGGVNEVMREMIAASGLKVPR 384 ++ +TFGGG NE+ RE+IA GL +PR Sbjct 359 ASVTLTFGGGTNEIQRELIAQFGLGLPR 386 >gi|77359837|ref|YP_339412.1| acyl-CoA dehydrogenase [Pseudoalteromonas haloplanktis TAC125] gi|76874748|emb|CAI85969.1| putative acyl-CoA dehydrogenase family protein [Pseudoalteromonas haloplanktis TAC125] Length=389 Score = 353 bits (905), Expect = 3e-95, Method: Compositional matrix adjust. Identities = 185/391 (48%), Positives = 262/391 (68%), Gaps = 6/391 (1%) Query 1 MFIDLTPEQRQLQAEIRQYFSNLISPDERTEMEKDRHGPAYRAVIRRMGRDGRLGVGWPK 60 MFIDLTPEQR L+ E+R YFS L++P+ R ++ G +R V+R+MG+DG L VGWPK Sbjct 1 MFIDLTPEQRALRLEVRDYFSQLMTPELRQKLRGSEGGEDFRKVVRQMGKDGWLAVGWPK 60 Query 61 EFGGLGFGPIEQQIFVNEAHRADVPLPAVTLQTVGPTLQAHGSELQKKKFLPAILAGEAH 120 E GG G+ EQ IF EA+ A PLP VT+ TVGP L +G+ELQK+KFLP I GE H Sbjct 61 EHGGQGYQATEQLIFFEEANIAGAPLPFVTISTVGPALMEYGTELQKEKFLPGIANGEIH 120 Query 121 FAIGYTEPEAGTDLASLRTTAVRDGDHYIVNGQKVFTTGAHDADYIWLACRTDPNAAKHK 180 FAIGY+EP AG+DLA+L+T A +GD++IVNG K++T+GA ADYIWLA RTD A+HK Sbjct 121 FAIGYSEPNAGSDLATLKTKASLEGDNFIVNGNKLWTSGAESADYIWLAARTDQELARHK 180 Query 181 GISILIVDTKDPGYSWTPIILADGAHHTNATYYNDVRVPVDMLVGKENDGWRLITTQLNN 240 GISI+I+DT+ G+S T ++ ++ T ATYY++V+VP +MLVG+ N GWRLIT+QLN+ Sbjct 181 GISIMILDTQSEGFSST--VIPTCSNPTAATYYDNVKVPQEMLVGELNGGWRLITSQLNH 238 Query 241 ERVMLGP-AGRFASIYDRVHAWASVPGGNGVTPIDHDDVKRALGEIRAIWRINELLNWQV 299 ER+ LG + + ++ RV+ WA+ G + ++ V+ AL E A L+N+++ Sbjct 239 ERLGLGSWSDKVVGLFRRVYLWANTADEQGKSAANNPWVRAALAECYAKLEAMRLINFRI 298 Query 300 ASAGED--INMADAAATKVFGTERVQRAGRLAEEIVGKYGNPAEPDTAELLRW-LDAQTK 356 A+ E +++A A+ TKV+G+E R +IVG G + A L L+ + + Sbjct 299 AADLEKGHMDIALASITKVYGSECSIEILRKLIDIVGMNGMVRDDSAASFLMGELEYEVR 358 Query 357 RNLVITFGGGVNEVMREMIAASGLKVPRVPR 387 ++ +TFGGG NE+ RE+IA G+ +PR R Sbjct 359 ASVTLTFGGGANELQRELIAQFGIGMPRAVR 389 >gi|118462902|ref|YP_880582.1| acyl-CoA dehydrogenase [Mycobacterium avium 104] gi|118164189|gb|ABK65086.1| putative acyl-CoA dehydrogenase [Mycobacterium avium 104] Length=394 Score = 352 bits (903), Expect = 6e-95, Method: Compositional matrix adjust. Identities = 192/391 (50%), Positives = 251/391 (65%), Gaps = 7/391 (1%) Query 1 MFIDLTPEQRQLQAEIRQYFSNLISPDERTEM-EKDRHGPAYRAVIRRMGRDGRLGVGWP 59 M ++ TPEQ+QL+AEIR +++P+ + E+ GPA R +R + LGVGWP Sbjct 1 MDLEYTPEQQQLRAEIRATLQTVMTPERVAAVSEQMDGGPAVRECVRALAAANLLGVGWP 60 Query 60 KEFGGLGFGPIEQQIFVNEAHRADVPLPAVTLQTVGPTLQAHGSELQKKKFLPAILAGEA 119 KE+GG GF IEQ IF EA R P+P VTL TVGPTL +G++ QK++FLPAIL G Sbjct 61 KEYGGRGFSAIEQFIFAEEARRVSAPIPLVTLNTVGPTLMHYGTDEQKRRFLPAILDGTV 120 Query 120 HFAIGYTEPEAGTDLASLRTTAVRDGDHYIVNGQKVFTTGAHDADYIWLACRTDPNAAKH 179 FAIGY+EP AG+DLAS+ TTAVR GD Y++NGQK+FT+GA ADYIWLA RTDP+A KH Sbjct 121 EFAIGYSEPGAGSDLASVHTTAVRVGDEYVINGQKMFTSGAAYADYIWLAVRTDPDAKKH 180 Query 180 KGISILIVDTKDPGYSWTPIILADGAHHTNATYYNDVRVPVDMLVGKENDGWRLITTQLN 239 KGISILIV T PG+SW P+ G T T+Y+DVRVPV LVG EN GW+LITTQLN Sbjct 181 KGISILIVPTSSPGFSWQPLHTMPGI-STFYTFYDDVRVPVSALVGAENQGWQLITTQLN 239 Query 240 NERVMLGPAGRFASIYDRVHAWASVPGGNGVTPIDHDDVKRALGEIRAIWRINELLNWQV 299 ER LG G ++D+ WA +G ID V+ AL + A +L+N +V Sbjct 240 FERAALGNLGALEPLFDKTLDWALSTELDGGRVIDQPWVRSALARVEAQVAAYKLVNLRV 299 Query 300 ASAGED--INMADAAATKVFGTERVQRAGRLAEEIVGKYGNPAEPDTAELLR-WLDAQTK 356 +A +NM +A+A KVFGTE Q+ R E++ GN LR L++ + Sbjct 300 NAAMTKGALNMGEASAAKVFGTELTQQVARELLEVLD--GNGVRRGAEAPLRGALESAYR 357 Query 357 RNLVITFGGGVNEVMREMIAASGLKVPRVPR 387 + ++ TFGGG NE+ R++IA + L +PR PR Sbjct 358 QAVINTFGGGANEIQRDIIAMAALGMPRAPR 388 >gi|254774215|ref|ZP_05215731.1| putative acyl-CoA dehydrogenase [Mycobacterium avium subsp. avium ATCC 25291] Length=394 Score = 352 bits (903), Expect = 6e-95, Method: Compositional matrix adjust. Identities = 192/391 (50%), Positives = 251/391 (65%), Gaps = 7/391 (1%) Query 1 MFIDLTPEQRQLQAEIRQYFSNLISPDERTEM-EKDRHGPAYRAVIRRMGRDGRLGVGWP 59 M ++ TPEQ+QL+AEIR +++P+ + E+ GPA R +R + LGVGWP Sbjct 1 MDLEYTPEQQQLRAEIRATLQTVMTPERVAAVSEQMDGGPAVRECVRALAAANLLGVGWP 60 Query 60 KEFGGLGFGPIEQQIFVNEAHRADVPLPAVTLQTVGPTLQAHGSELQKKKFLPAILAGEA 119 KE+GG GF IEQ IF EA R P+P VTL TVGPTL +G++ QK++FLPAIL G Sbjct 61 KEYGGRGFSAIEQFIFAEEARRVSAPIPLVTLNTVGPTLMHYGTDEQKRRFLPAILDGTV 120 Query 120 HFAIGYTEPEAGTDLASLRTTAVRDGDHYIVNGQKVFTTGAHDADYIWLACRTDPNAAKH 179 FAIGY+EP AG+DLAS+ TTAVR GD Y++NGQK+FT+GA ADYIWLA RTDP+A KH Sbjct 121 EFAIGYSEPGAGSDLASVHTTAVRVGDEYVINGQKMFTSGAAYADYIWLAVRTDPDAKKH 180 Query 180 KGISILIVDTKDPGYSWTPIILADGAHHTNATYYNDVRVPVDMLVGKENDGWRLITTQLN 239 KGISILIV T PG+SW P+ G T T+Y+DVRVPV LVG EN GW+LITTQLN Sbjct 181 KGISILIVPTSSPGFSWQPLHTMPGI-STFYTFYDDVRVPVSALVGAENQGWQLITTQLN 239 Query 240 NERVMLGPAGRFASIYDRVHAWASVPGGNGVTPIDHDDVKRALGEIRAIWRINELLNWQV 299 ER LG G ++D+ WA +G ID V+ AL + A +L+N +V Sbjct 240 FERAALGNLGALEPLFDKTLDWALSTELDGGRVIDQPWVRSALARVEAQVAAYKLVNLRV 299 Query 300 ASAGED--INMADAAATKVFGTERVQRAGRLAEEIVGKYGNPAEPDTAELLR-WLDAQTK 356 +A +NM +A+A KVFGTE Q+ R E++ GN LR L++ + Sbjct 300 NAAMTKGALNMGEASAAKVFGTELTQQVARELLEVLD--GNGVRRGAEAPLRGALESAYR 357 Query 357 RNLVITFGGGVNEVMREMIAASGLKVPRVPR 387 + ++ TFGGG NE+ R++IA + L +PR PR Sbjct 358 QAVINTFGGGANEIQRDIIAMAALGMPRAPR 388 >gi|288918151|ref|ZP_06412507.1| acyl-CoA dehydrogenase domain protein [Frankia sp. EUN1f] gi|288350427|gb|EFC84648.1| acyl-CoA dehydrogenase domain protein [Frankia sp. EUN1f] Length=389 Score = 350 bits (898), Expect = 2e-94, Method: Compositional matrix adjust. Identities = 190/389 (49%), Positives = 256/389 (66%), Gaps = 9/389 (2%) Query 1 MFIDLTPEQRQLQAEIRQYFSNLISPDERTEMEKDRHGPAYRAVIRRMGRDGRLGVGWPK 60 M + TPEQ +L+AE+R Y++ LI D R ++ D GP R ++RRMG DG LG+GWP Sbjct 1 MHLAYTPEQEKLRAELRDYYAELIDADTRAALDADLTGPVMRRLVRRMGADGWLGLGWPA 60 Query 61 EFGGLGFGPIEQQIFVNEAHRADVPLPAVTLQTVGPTLQAHGSELQKKKFLPAILAGEAH 120 +GG G G +EQ IF +E+ RA P+P +T+ T+GPTL G++ Q+++FLPAILAGE H Sbjct 61 RYGGRGLGHVEQFIFFDESLRARAPVPMLTINTIGPTLMQFGTDAQRERFLPAILAGEVH 120 Query 121 FAIGYTEPEAGTDLASLRTTAVRDGDHYIVNGQKVFTTGAHDADYIWLACRTDPNAAKHK 180 F +GY+EPEAGTDLASLRTTAVRDGD Y+VNG K++T+ A AD+ WLA RT+P+ KH+ Sbjct 121 FCVGYSEPEAGTDLASLRTTAVRDGDSYLVNGSKLWTSYAQTADFCWLAVRTNPHVRKHR 180 Query 181 GISILIVDTKDPGYSWTPIILADGAHHTNATYYNDVRVPVDMLVGKENDGWRLITTQLNN 240 GISILIV PG + +P+ L G H A +Y+ VRVP LVG E++GW +IT QLN+ Sbjct 181 GISILIVPMDTPGITVSPLSLL-GEHEIAAVHYDQVRVPAANLVGGEDNGWTVITNQLNH 239 Query 241 ERVMLGPAGRFASIYDRVHAWAS---VPGGNGVTPIDHDDVKRALGEIRAIWRINELLNW 297 ERV L G S V WA+ +P G+ V ID D V+ L A + + LLNW Sbjct 240 ERVTLASPGMVDSALTDVRRWAASTRLPDGHRV--IDQDWVRANLAHAYAGFSVLRLLNW 297 Query 298 QVASAGED--INMADAAATKVFGTERVQRAGRLAEEIVGKYGN-PAEPDTAELLRWLDAQ 354 +VA+ GE +++ADA+ KVFGTE A L EIVG+ G A A L L++ Sbjct 298 KVAADGERGVLDVADASGIKVFGTEHYLDALTLLMEIVGEPGYLRASSPGAVLAGRLESL 357 Query 355 TKRNLVITFGGGVNEVMREMIAASGLKVP 383 + +++TFGGGVNE+ R++IA GL +P Sbjct 358 YRGLVILTFGGGVNELQRDLIAQFGLGLP 386 >gi|41408683|ref|NP_961519.1| FadE26_2 [Mycobacterium avium subsp. paratuberculosis K-10] gi|41397041|gb|AAS04902.1| FadE26_2 [Mycobacterium avium subsp. paratuberculosis K-10] gi|336458680|gb|EGO37642.1| acyl-CoA dehydrogenase [Mycobacterium avium subsp. paratuberculosis S397] Length=394 Score = 350 bits (898), Expect = 2e-94, Method: Compositional matrix adjust. Identities = 191/391 (49%), Positives = 250/391 (64%), Gaps = 7/391 (1%) Query 1 MFIDLTPEQRQLQAEIRQYFSNLISPDERTEM-EKDRHGPAYRAVIRRMGRDGRLGVGWP 59 M ++ TPEQ+QL+AEIR +++P+ + E+ GPA R +R + LGVGWP Sbjct 1 MDLEYTPEQQQLRAEIRATLQTVMTPERVAAVSEQMDGGPAVRECVRALAAANLLGVGWP 60 Query 60 KEFGGLGFGPIEQQIFVNEAHRADVPLPAVTLQTVGPTLQAHGSELQKKKFLPAILAGEA 119 KE+GG GF IEQ IF EA R P+P VTL T GPTL +G++ QK++FLPAIL G Sbjct 61 KEYGGRGFSAIEQFIFAEEARRVSAPIPLVTLNTAGPTLMHYGTDEQKRRFLPAILDGTV 120 Query 120 HFAIGYTEPEAGTDLASLRTTAVRDGDHYIVNGQKVFTTGAHDADYIWLACRTDPNAAKH 179 FAIGY+EP AG+DLAS+ TTAVR GD Y++NGQK+FT+GA ADYIWLA RTDP+A KH Sbjct 121 EFAIGYSEPGAGSDLASVHTTAVRVGDEYVINGQKMFTSGAAYADYIWLAVRTDPDAKKH 180 Query 180 KGISILIVDTKDPGYSWTPIILADGAHHTNATYYNDVRVPVDMLVGKENDGWRLITTQLN 239 KGISILIV T PG+SW P+ G T T+Y+DVRVPV LVG EN GW+LITTQLN Sbjct 181 KGISILIVPTSSPGFSWQPLHTMPGI-STFYTFYDDVRVPVSALVGAENQGWQLITTQLN 239 Query 240 NERVMLGPAGRFASIYDRVHAWASVPGGNGVTPIDHDDVKRALGEIRAIWRINELLNWQV 299 ER LG G ++D+ WA +G ID V+ AL + A +L+N +V Sbjct 240 FERAALGNLGALEPLFDKTLDWALSTELDGGRVIDQPWVRSALARVEAQVAAYKLVNLRV 299 Query 300 ASAGED--INMADAAATKVFGTERVQRAGRLAEEIVGKYGNPAEPDTAELLR-WLDAQTK 356 +A +NM +A+A KVFGTE Q+ R E++ GN LR L++ + Sbjct 300 NAAMTKGALNMGEASAAKVFGTELTQQVARELLEVLD--GNGVRRGAEAPLRGALESAYR 357 Query 357 RNLVITFGGGVNEVMREMIAASGLKVPRVPR 387 + ++ TFGGG NE+ R++IA + L +PR PR Sbjct 358 QAVINTFGGGANEIQRDIIAMAALGMPRAPR 388 >gi|256391372|ref|YP_003112936.1| acyl-CoA dehydrogenase domain-containing protein [Catenulispora acidiphila DSM 44928] gi|256357598|gb|ACU71095.1| acyl-CoA dehydrogenase domain protein [Catenulispora acidiphila DSM 44928] Length=396 Score = 349 bits (896), Expect = 4e-94, Method: Compositional matrix adjust. Identities = 190/397 (48%), Positives = 257/397 (65%), Gaps = 12/397 (3%) Query 1 MFIDLTPEQRQLQAEIRQYFSNLISPDERTEMEKDRHG-PAYRAVIRRMGRDGRLGVGWP 59 M I T Q QL+ +R YF+ L++P+ EM G P R +R+MGRDG LGVGWP Sbjct 1 MRIAYTEAQAQLRDTLRAYFTELVTPEVAEEMSTGEFGGPRSREAVRQMGRDGWLGVGWP 60 Query 60 KEFGGLGFGPIEQQIFVNEAHRADVPLPAVTLQTVGPTLQAHGSELQKKKFLPAILAGEA 119 +E+GGLGF P+EQ +F +EA RA P+P +T+ VGP + G++ QK + LP ILAGE Sbjct 61 EEYGGLGFTPVEQFVFFDEAQRAGAPVPFLTINAVGPAIMRFGTDKQKTEILPRILAGEC 120 Query 120 HFAIGYTEPEAGTDLASLRTTAVR--DGDHYIVNGQKVFTTGAHDADYIWLACRTDPNA- 176 FAIGY+EP++GTDLASL+T AV DG+HY+VNGQK+FT+ + ADY+WLACRTDP A Sbjct 121 MFAIGYSEPDSGTDLASLKTRAVLEPDGEHYLVNGQKIFTSLSDHADYVWLACRTDPEAP 180 Query 177 ----AKHKGISILIVDTKDPGYSWTPIILADGAHHTNATYYNDVRVPVDMLVGKENDGWR 232 KHKGISIL+V T DPG+++TP I G T ATYY D+RVP + ++G+ +GWR Sbjct 181 ARTGKKHKGISILMVPTSDPGFTYTP-IHTIGEASTYATYYTDLRVPAENVIGEPGEGWR 239 Query 233 LITTQLNNERVMLGPAGRFASIYDRVHAWA-SVPGGNGVTPIDHDDVKRALGEIRAIWRI 291 +ITTQLN+ERV L +G + V WA +G ID + V+ L I+A Sbjct 240 VITTQLNHERVALCSSGSLERPFIEVVEWARQTKLADGSRVIDREWVRVHLARIQAKLAA 299 Query 292 NELLNWQVASAGEDINMADAAATKVFGTERVQRAGRLAEEIVGKYGNPAEPDTAELLRWL 351 L NW+VA++ E +++ADA+ATKV+GTE A L E++G G + LL Sbjct 300 LRLFNWKVAASAE-LDVADASATKVWGTELYCEAYGLLLEVLGAAGALKKDSPGSLLAGR 358 Query 352 DAQTKRN-LVITFGGGVNEVMREMIAASGLKVPRVPR 387 + R L++TFGGG NE+ R++IA GL +PR+PR Sbjct 359 VERAYRGVLILTFGGGTNEIQRDLIALFGLNMPRIPR 395 Lambda K H 0.319 0.137 0.416 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 755833905300 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40