BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv3544c Length=339 Score E Sequences producing significant alignments: (Bits) Value gi|15610680|ref|NP_218061.1| acyl-CoA dehydrogenase FADE28 [Myco... 679 0.0 gi|15843156|ref|NP_338193.1| acyl-CoA dehydrogenase, putative [M... 678 0.0 gi|254552651|ref|ZP_05143098.1| putative acyl-CoA dehydrogenase ... 677 0.0 gi|148824750|ref|YP_001289504.1| acyl-CoA dehydrogenase fadE28 [... 676 0.0 gi|254822626|ref|ZP_05227627.1| FadE28 [Mycobacterium intracellu... 565 3e-159 gi|240172834|ref|ZP_04751493.1| putative acyl-CoA dehydrogenase ... 564 7e-159 gi|254773574|ref|ZP_05215090.1| FadE28 [Mycobacterium avium subs... 556 2e-156 gi|41406621|ref|NP_959457.1| FadE28 [Mycobacterium avium subsp. ... 556 2e-156 gi|118465978|ref|YP_879897.1| acyl-CoA dehydrogenase [Mycobacter... 556 2e-156 gi|183984999|ref|YP_001853290.1| acyl-CoA dehydrogenase FadE28 [... 548 4e-154 gi|296166573|ref|ZP_06849003.1| probable acyl-CoA dehydrogenase ... 547 1e-153 gi|118619290|ref|YP_907622.1| acyl-CoA dehydrogenase FadE28 [Myc... 545 3e-153 gi|342862370|ref|ZP_08719010.1| acyl-CoA dehydrogenase FadE28 [M... 545 5e-153 gi|333992331|ref|YP_004524945.1| acyl-CoA dehydrogenase [Mycobac... 488 4e-136 gi|145222101|ref|YP_001132779.1| acyl-CoA dehydrogenase domain-c... 479 3e-133 gi|126437625|ref|YP_001073316.1| acyl-CoA dehydrogenase domain-c... 478 8e-133 gi|118472010|ref|YP_890220.1| acyl-CoA dehydrogenase [Mycobacter... 478 8e-133 gi|108801639|ref|YP_641836.1| acyl-CoA dehydrogenase-like protei... 476 3e-132 gi|120406205|ref|YP_956034.1| acyl-CoA dehydrogenase domain-cont... 470 2e-130 gi|315442541|ref|YP_004075420.1| acyl-CoA dehydrogenase [Mycobac... 460 1e-127 gi|169627717|ref|YP_001701366.1| acyl-CoA dehydrogenase FadE [My... 384 1e-104 gi|226304197|ref|YP_002764155.1| acyl-CoA dehydrogenase [Rhodoco... 328 7e-88 gi|229494394|ref|ZP_04388157.1| FadE28 [Rhodococcus erythropolis... 326 4e-87 gi|111021456|ref|YP_704428.1| acyl-CoA dehydrogenase [Rhodococcu... 323 3e-86 gi|226363822|ref|YP_002781604.1| acyl-CoA dehydrogenase [Rhodoco... 321 1e-85 gi|312138118|ref|YP_004005454.1| acyl-CoA dehydrogenase [Rhodoco... 318 1e-84 gi|325674977|ref|ZP_08154664.1| acyl-CoA dehydrogenase [Rhodococ... 312 6e-83 gi|119717014|ref|YP_923979.1| acyl-CoA dehydrogenase domain-cont... 260 2e-67 gi|54022413|ref|YP_116655.1| putative acyl-CoA dehydrogenase [No... 254 1e-65 gi|300784415|ref|YP_003764706.1| acyl-CoA dehydrogenase [Amycola... 249 5e-64 gi|343925843|ref|ZP_08765358.1| putative acyl-CoA dehydrogenase ... 248 7e-64 gi|319948638|ref|ZP_08022762.1| acyl-CoA dehydrogenase domain pr... 245 8e-63 gi|326384608|ref|ZP_08206287.1| acyl-CoA dehydrogenase domain-co... 240 3e-61 gi|262200881|ref|YP_003272089.1| acyl-CoA dehydrogenase domain-c... 237 2e-60 gi|333918576|ref|YP_004492157.1| putative acyl-CoA dehydrogenase... 236 5e-60 gi|145595204|ref|YP_001159501.1| acyl-CoA dehydrogenase domain-c... 225 7e-57 gi|302525650|ref|ZP_07277992.1| acyl-CoA dehydrogenase domain-co... 221 1e-55 gi|296141526|ref|YP_003648769.1| acyl-CoA dehydrogenase domain-c... 211 2e-52 gi|159038451|ref|YP_001537704.1| acyl-CoA dehydrogenase domain-c... 210 3e-52 gi|311744301|ref|ZP_07718105.1| acyl-CoA dehydrogenase domain pr... 207 2e-51 gi|326331720|ref|ZP_08198008.1| putative acyl-CoA dehydrogenase ... 201 2e-49 gi|269127846|ref|YP_003301216.1| acyl-CoA dehydrogenase domain-c... 177 3e-42 gi|271969395|ref|YP_003343591.1| acyl-CoA dehydrogenase domain-c... 167 3e-39 gi|296170096|ref|ZP_06851696.1| acyl-CoA dehydrogenase domain pr... 164 1e-38 gi|229494541|ref|ZP_04388304.1| acyl-CoA dehydrogenase [Rhodococ... 161 1e-37 gi|111021664|ref|YP_704636.1| acyl-CoA dehydrogenase [Rhodococcu... 160 4e-37 gi|118463127|ref|YP_880581.1| acyl-CoA dehydrogenase domain-cont... 158 1e-36 gi|226304443|ref|YP_002764401.1| acyl-CoA dehydrogenase [Rhodoco... 157 3e-36 gi|41408686|ref|NP_961522.1| hypothetical protein MAP2588 [Mycob... 155 9e-36 gi|254774212|ref|ZP_05215728.1| acyl-CoA dehydrogenase domain-co... 153 5e-35 >gi|15610680|ref|NP_218061.1| acyl-CoA dehydrogenase FADE28 [Mycobacterium tuberculosis H37Rv] gi|31794720|ref|NP_857213.1| acyl-CoA dehydrogenase FADE28 [Mycobacterium bovis AF2122/97] gi|121639463|ref|YP_979687.1| putative acyl-CoA dehydrogenase fadE28 [Mycobacterium bovis BCG str. Pasteur 1173P2] 34 more sequence titles Length=339 Score = 679 bits (1751), Expect = 0.0, Method: Compositional matrix adjust. Identities = 339/339 (100%), Positives = 339/339 (100%), Gaps = 0/339 (0%) Query 1 MDFDPTAEQQAVADVVTSVLERDISWEALVCGGVTALPVPERLGGDGVGLFEVGALLTEV 60 MDFDPTAEQQAVADVVTSVLERDISWEALVCGGVTALPVPERLGGDGVGLFEVGALLTEV Sbjct 1 MDFDPTAEQQAVADVVTSVLERDISWEALVCGGVTALPVPERLGGDGVGLFEVGALLTEV 60 Query 61 GRHGAVTPALATLGLGVVPLLELASAEQQDRFLAGVAKGGVLTAALNEPGAALPDRPATS 120 GRHGAVTPALATLGLGVVPLLELASAEQQDRFLAGVAKGGVLTAALNEPGAALPDRPATS Sbjct 61 GRHGAVTPALATLGLGVVPLLELASAEQQDRFLAGVAKGGVLTAALNEPGAALPDRPATS 120 Query 121 FVGGRLSGTKVGVGYAEQADWMLVTADNAVVVVSPTADGVRMVRTPTSNGSDEYVMTMDG 180 FVGGRLSGTKVGVGYAEQADWMLVTADNAVVVVSPTADGVRMVRTPTSNGSDEYVMTMDG Sbjct 121 FVGGRLSGTKVGVGYAEQADWMLVTADNAVVVVSPTADGVRMVRTPTSNGSDEYVMTMDG 180 Query 181 VAVADCDILADVAAHRVNQLALAVMGAYADGLVAGALRLTADYVANRKQFGKPLSTFQTV 240 VAVADCDILADVAAHRVNQLALAVMGAYADGLVAGALRLTADYVANRKQFGKPLSTFQTV Sbjct 181 VAVADCDILADVAAHRVNQLALAVMGAYADGLVAGALRLTADYVANRKQFGKPLSTFQTV 240 Query 241 AAQLAEVYIASRTIDLVAKSVIWRLAEDLDAGDDLGVLGYWVTSQAPPAMQICHHLHGGM 300 AAQLAEVYIASRTIDLVAKSVIWRLAEDLDAGDDLGVLGYWVTSQAPPAMQICHHLHGGM Sbjct 241 AAQLAEVYIASRTIDLVAKSVIWRLAEDLDAGDDLGVLGYWVTSQAPPAMQICHHLHGGM 300 Query 301 GMDVTYPMHRYYSTIKDLTRLLGGPSHRLELLGARCSLT 339 GMDVTYPMHRYYSTIKDLTRLLGGPSHRLELLGARCSLT Sbjct 301 GMDVTYPMHRYYSTIKDLTRLLGGPSHRLELLGARCSLT 339 >gi|15843156|ref|NP_338193.1| acyl-CoA dehydrogenase, putative [Mycobacterium tuberculosis CDC1551] gi|254234121|ref|ZP_04927445.1| acyl-CoA dehydrogenase fadE28 [Mycobacterium tuberculosis C] gi|254366109|ref|ZP_04982153.1| acyl-CoA dehydrogenase fadE28 [Mycobacterium tuberculosis str. Haarlem] 29 more sequence titles Length=345 Score = 678 bits (1749), Expect = 0.0, Method: Compositional matrix adjust. Identities = 339/339 (100%), Positives = 339/339 (100%), Gaps = 0/339 (0%) Query 1 MDFDPTAEQQAVADVVTSVLERDISWEALVCGGVTALPVPERLGGDGVGLFEVGALLTEV 60 MDFDPTAEQQAVADVVTSVLERDISWEALVCGGVTALPVPERLGGDGVGLFEVGALLTEV Sbjct 7 MDFDPTAEQQAVADVVTSVLERDISWEALVCGGVTALPVPERLGGDGVGLFEVGALLTEV 66 Query 61 GRHGAVTPALATLGLGVVPLLELASAEQQDRFLAGVAKGGVLTAALNEPGAALPDRPATS 120 GRHGAVTPALATLGLGVVPLLELASAEQQDRFLAGVAKGGVLTAALNEPGAALPDRPATS Sbjct 67 GRHGAVTPALATLGLGVVPLLELASAEQQDRFLAGVAKGGVLTAALNEPGAALPDRPATS 126 Query 121 FVGGRLSGTKVGVGYAEQADWMLVTADNAVVVVSPTADGVRMVRTPTSNGSDEYVMTMDG 180 FVGGRLSGTKVGVGYAEQADWMLVTADNAVVVVSPTADGVRMVRTPTSNGSDEYVMTMDG Sbjct 127 FVGGRLSGTKVGVGYAEQADWMLVTADNAVVVVSPTADGVRMVRTPTSNGSDEYVMTMDG 186 Query 181 VAVADCDILADVAAHRVNQLALAVMGAYADGLVAGALRLTADYVANRKQFGKPLSTFQTV 240 VAVADCDILADVAAHRVNQLALAVMGAYADGLVAGALRLTADYVANRKQFGKPLSTFQTV Sbjct 187 VAVADCDILADVAAHRVNQLALAVMGAYADGLVAGALRLTADYVANRKQFGKPLSTFQTV 246 Query 241 AAQLAEVYIASRTIDLVAKSVIWRLAEDLDAGDDLGVLGYWVTSQAPPAMQICHHLHGGM 300 AAQLAEVYIASRTIDLVAKSVIWRLAEDLDAGDDLGVLGYWVTSQAPPAMQICHHLHGGM Sbjct 247 AAQLAEVYIASRTIDLVAKSVIWRLAEDLDAGDDLGVLGYWVTSQAPPAMQICHHLHGGM 306 Query 301 GMDVTYPMHRYYSTIKDLTRLLGGPSHRLELLGARCSLT 339 GMDVTYPMHRYYSTIKDLTRLLGGPSHRLELLGARCSLT Sbjct 307 GMDVTYPMHRYYSTIKDLTRLLGGPSHRLELLGARCSLT 345 >gi|254552651|ref|ZP_05143098.1| putative acyl-CoA dehydrogenase [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|289763722|ref|ZP_06523100.1| acyl-CoA dehydrogenase fadE28 [Mycobacterium tuberculosis GM 1503] gi|297636216|ref|ZP_06953996.1| putative acyl-CoA dehydrogenase [Mycobacterium tuberculosis KZN 4207] gi|297733210|ref|ZP_06962328.1| putative acyl-CoA dehydrogenase [Mycobacterium tuberculosis KZN R506] gi|313660540|ref|ZP_07817420.1| putative acyl-CoA dehydrogenase [Mycobacterium tuberculosis KZN V2475] gi|289711228|gb|EFD75244.1| acyl-CoA dehydrogenase fadE28 [Mycobacterium tuberculosis GM 1503] gi|344221376|gb|AEN02007.1| acyl-CoA dehydrogenase FADE28 [Mycobacterium tuberculosis CTRI-2] Length=339 Score = 677 bits (1748), Expect = 0.0, Method: Compositional matrix adjust. Identities = 338/339 (99%), Positives = 339/339 (100%), Gaps = 0/339 (0%) Query 1 MDFDPTAEQQAVADVVTSVLERDISWEALVCGGVTALPVPERLGGDGVGLFEVGALLTEV 60 MDFDPTAEQQAVADVVTSVLERDISWEALVCGGVTALPVPERLGGDGVGLFEVGALLTEV Sbjct 1 MDFDPTAEQQAVADVVTSVLERDISWEALVCGGVTALPVPERLGGDGVGLFEVGALLTEV 60 Query 61 GRHGAVTPALATLGLGVVPLLELASAEQQDRFLAGVAKGGVLTAALNEPGAALPDRPATS 120 GRHGAVTPALATLGLGVVPLLELASAEQQDRFLAGVAKGGVLTAALNEPGAALPDRPATS Sbjct 61 GRHGAVTPALATLGLGVVPLLELASAEQQDRFLAGVAKGGVLTAALNEPGAALPDRPATS 120 Query 121 FVGGRLSGTKVGVGYAEQADWMLVTADNAVVVVSPTADGVRMVRTPTSNGSDEYVMTMDG 180 FVGGRLSGTKVGVGYAEQADWMLVTADNAVVVVSPTADGVRMVRTPTSNGSDEYVMTMDG Sbjct 121 FVGGRLSGTKVGVGYAEQADWMLVTADNAVVVVSPTADGVRMVRTPTSNGSDEYVMTMDG 180 Query 181 VAVADCDILADVAAHRVNQLALAVMGAYADGLVAGALRLTADYVANRKQFGKPLSTFQTV 240 VAVADCDILADVAAHRVNQLALAVMGAYADGLVAGALRLTADYVANRKQFGKPLSTFQTV Sbjct 181 VAVADCDILADVAAHRVNQLALAVMGAYADGLVAGALRLTADYVANRKQFGKPLSTFQTV 240 Query 241 AAQLAEVYIASRTIDLVAKSVIWRLAEDLDAGDDLGVLGYWVTSQAPPAMQICHHLHGGM 300 AAQLAEVYIASRTIDLVAKSVIWRLAEDLDAGDDLGVLGYWVTSQAPPAMQ+CHHLHGGM Sbjct 241 AAQLAEVYIASRTIDLVAKSVIWRLAEDLDAGDDLGVLGYWVTSQAPPAMQLCHHLHGGM 300 Query 301 GMDVTYPMHRYYSTIKDLTRLLGGPSHRLELLGARCSLT 339 GMDVTYPMHRYYSTIKDLTRLLGGPSHRLELLGARCSLT Sbjct 301 GMDVTYPMHRYYSTIKDLTRLLGGPSHRLELLGARCSLT 339 >gi|148824750|ref|YP_001289504.1| acyl-CoA dehydrogenase fadE28 [Mycobacterium tuberculosis F11] gi|253800585|ref|YP_003033586.1| acyl-CoA dehydrogenase fadE28 [Mycobacterium tuberculosis KZN 1435] gi|289555809|ref|ZP_06445019.1| acyl-CoA dehydrogenase fadE28 [Mycobacterium tuberculosis KZN 605] gi|148723277|gb|ABR07902.1| acyl-CoA dehydrogenase fadE28 [Mycobacterium tuberculosis F11] gi|253322088|gb|ACT26691.1| acyl-CoA dehydrogenase fadE28 [Mycobacterium tuberculosis KZN 1435] gi|289440441|gb|EFD22934.1| acyl-CoA dehydrogenase fadE28 [Mycobacterium tuberculosis KZN 605] gi|328460316|gb|AEB05739.1| acyl-CoA dehydrogenase fadE28 [Mycobacterium tuberculosis KZN 4207] Length=345 Score = 676 bits (1745), Expect = 0.0, Method: Compositional matrix adjust. Identities = 338/339 (99%), Positives = 339/339 (100%), Gaps = 0/339 (0%) Query 1 MDFDPTAEQQAVADVVTSVLERDISWEALVCGGVTALPVPERLGGDGVGLFEVGALLTEV 60 MDFDPTAEQQAVADVVTSVLERDISWEALVCGGVTALPVPERLGGDGVGLFEVGALLTEV Sbjct 7 MDFDPTAEQQAVADVVTSVLERDISWEALVCGGVTALPVPERLGGDGVGLFEVGALLTEV 66 Query 61 GRHGAVTPALATLGLGVVPLLELASAEQQDRFLAGVAKGGVLTAALNEPGAALPDRPATS 120 GRHGAVTPALATLGLGVVPLLELASAEQQDRFLAGVAKGGVLTAALNEPGAALPDRPATS Sbjct 67 GRHGAVTPALATLGLGVVPLLELASAEQQDRFLAGVAKGGVLTAALNEPGAALPDRPATS 126 Query 121 FVGGRLSGTKVGVGYAEQADWMLVTADNAVVVVSPTADGVRMVRTPTSNGSDEYVMTMDG 180 FVGGRLSGTKVGVGYAEQADWMLVTADNAVVVVSPTADGVRMVRTPTSNGSDEYVMTMDG Sbjct 127 FVGGRLSGTKVGVGYAEQADWMLVTADNAVVVVSPTADGVRMVRTPTSNGSDEYVMTMDG 186 Query 181 VAVADCDILADVAAHRVNQLALAVMGAYADGLVAGALRLTADYVANRKQFGKPLSTFQTV 240 VAVADCDILADVAAHRVNQLALAVMGAYADGLVAGALRLTADYVANRKQFGKPLSTFQTV Sbjct 187 VAVADCDILADVAAHRVNQLALAVMGAYADGLVAGALRLTADYVANRKQFGKPLSTFQTV 246 Query 241 AAQLAEVYIASRTIDLVAKSVIWRLAEDLDAGDDLGVLGYWVTSQAPPAMQICHHLHGGM 300 AAQLAEVYIASRTIDLVAKSVIWRLAEDLDAGDDLGVLGYWVTSQAPPAMQ+CHHLHGGM Sbjct 247 AAQLAEVYIASRTIDLVAKSVIWRLAEDLDAGDDLGVLGYWVTSQAPPAMQLCHHLHGGM 306 Query 301 GMDVTYPMHRYYSTIKDLTRLLGGPSHRLELLGARCSLT 339 GMDVTYPMHRYYSTIKDLTRLLGGPSHRLELLGARCSLT Sbjct 307 GMDVTYPMHRYYSTIKDLTRLLGGPSHRLELLGARCSLT 345 >gi|254822626|ref|ZP_05227627.1| FadE28 [Mycobacterium intracellulare ATCC 13950] Length=337 Score = 565 bits (1457), Expect = 3e-159, Method: Compositional matrix adjust. Identities = 277/337 (83%), Positives = 305/337 (91%), Gaps = 0/337 (0%) Query 1 MDFDPTAEQQAVADVVTSVLERDISWEALVCGGVTALPVPERLGGDGVGLFEVGALLTEV 60 MDFD TA QQAVADVVTSV ER++SWEALV GGVTALPVPERLGGDGVGL EV +LTE+ Sbjct 1 MDFDLTATQQAVADVVTSVFERELSWEALVNGGVTALPVPERLGGDGVGLPEVATVLTEI 60 Query 61 GRHGAVTPALATLGLGVVPLLELASAEQQDRFLAGVAKGGVLTAALNEPGAALPDRPATS 120 GRHGA+TPALATLG GV+PL++LAS +QQ+RFLAGVAKGGVLTAALNEPGAALPDRP+T+ Sbjct 61 GRHGAITPALATLGFGVLPLVDLASEDQQERFLAGVAKGGVLTAALNEPGAALPDRPSTT 120 Query 121 FVGGRLSGTKVGVGYAEQADWMLVTADNAVVVVSPTADGVRMVRTPTSNGSDEYVMTMDG 180 F GGRLSGTKVGVGYA QADWM+VT+D+AVVVVSP A GV +V+TPTSN SDEY +T Sbjct 121 FAGGRLSGTKVGVGYAGQADWMIVTSDSAVVVVSPKAGGVEVVQTPTSNDSDEYTVTFTD 180 Query 181 VAVADCDILADVAAHRVNQLALAVMGAYADGLVAGALRLTADYVANRKQFGKPLSTFQTV 240 VA+ D D+LA A RVNQL LA +GAYADGLVAGALRLTADYVANRKQFGKPLSTFQTV Sbjct 181 VAIEDADVLAGATAQRVNQLVLASIGAYADGLVAGALRLTADYVANRKQFGKPLSTFQTV 240 Query 241 AAQLAEVYIASRTIDLVAKSVIWRLAEDLDAGDDLGVLGYWVTSQAPPAMQICHHLHGGM 300 AAQLAEVYIASRTIDLVAKSV+WRL+E DA DDL VLGYWVTSQAPP MQ+CHHLHGGM Sbjct 241 AAQLAEVYIASRTIDLVAKSVVWRLSEGRDADDDLDVLGYWVTSQAPPVMQLCHHLHGGM 300 Query 301 GMDVTYPMHRYYSTIKDLTRLLGGPSHRLELLGARCS 337 GMD+TYPMHRYYSTIKDLTRLLGGPSHRL+L+GA+CS Sbjct 301 GMDITYPMHRYYSTIKDLTRLLGGPSHRLDLVGAQCS 337 >gi|240172834|ref|ZP_04751493.1| putative acyl-CoA dehydrogenase [Mycobacterium kansasii ATCC 12478] Length=376 Score = 564 bits (1454), Expect = 7e-159, Method: Compositional matrix adjust. Identities = 278/332 (84%), Positives = 301/332 (91%), Gaps = 0/332 (0%) Query 1 MDFDPTAEQQAVADVVTSVLERDISWEALVCGGVTALPVPERLGGDGVGLFEVGALLTEV 60 MDFD TAEQQAVADVVTSVL+RD SW ALV GGVTALPVPERLGGDGVGL EVG +LTE Sbjct 1 MDFDLTAEQQAVADVVTSVLQRDASWAALVDGGVTALPVPERLGGDGVGLLEVGTVLTEA 60 Query 61 GRHGAVTPALATLGLGVVPLLELASAEQQDRFLAGVAKGGVLTAALNEPGAALPDRPATS 120 GRHGAVTPALATLGLG VPLL LA+AEQQDR+LAGVAKG VLTAALNEPGA LPDRP+TS Sbjct 61 GRHGAVTPALATLGLGAVPLLNLATAEQQDRYLAGVAKGSVLTAALNEPGAPLPDRPSTS 120 Query 121 FVGGRLSGTKVGVGYAEQADWMLVTADNAVVVVSPTADGVRMVRTPTSNGSDEYVMTMDG 180 F GGRLSGTK+GVGYA A+W++VTAD+AVVVVSP A+GV++ RTPTSNGSDEY +T+ Sbjct 121 FAGGRLSGTKIGVGYAGHAEWLIVTADSAVVVVSPKAEGVQLARTPTSNGSDEYTVTLRD 180 Query 181 VAVADCDILADVAAHRVNQLALAVMGAYADGLVAGALRLTADYVANRKQFGKPLSTFQTV 240 VAVAD D+L + HRVNQLALA++GAYADGLVAGALRLTADYVANRKQFGKPLSTFQTV Sbjct 181 VAVADSDVLVGASPHRVNQLALAMLGAYADGLVAGALRLTADYVANRKQFGKPLSTFQTV 240 Query 241 AAQLAEVYIASRTIDLVAKSVIWRLAEDLDAGDDLGVLGYWVTSQAPPAMQICHHLHGGM 300 AAQLAEVYIASRTIDL AKSVIWRLA DA D+L VLGYW+TSQAPP MQICHHLHGGM Sbjct 241 AAQLAEVYIASRTIDLAAKSVIWRLAGGRDADDELDVLGYWLTSQAPPVMQICHHLHGGM 300 Query 301 GMDVTYPMHRYYSTIKDLTRLLGGPSHRLELL 332 GMD+TYPMHRYYSTIKDLTRLLGGPSHRLEL+ Sbjct 301 GMDITYPMHRYYSTIKDLTRLLGGPSHRLELV 332 >gi|254773574|ref|ZP_05215090.1| FadE28 [Mycobacterium avium subsp. avium ATCC 25291] Length=356 Score = 556 bits (1433), Expect = 2e-156, Method: Compositional matrix adjust. Identities = 274/332 (83%), Positives = 300/332 (91%), Gaps = 0/332 (0%) Query 1 MDFDPTAEQQAVADVVTSVLERDISWEALVCGGVTALPVPERLGGDGVGLFEVGALLTEV 60 MDFDP+ QQAVADVVTSVL+R++SWEALV GGVTALPVPERLGGDGVGL EV +LTEV Sbjct 1 MDFDPSPTQQAVADVVTSVLDRELSWEALVDGGVTALPVPERLGGDGVGLPEVATVLTEV 60 Query 61 GRHGAVTPALATLGLGVVPLLELASAEQQDRFLAGVAKGGVLTAALNEPGAALPDRPATS 120 GR GA+TPALATLG V+PLLELAS EQQDRFLAGVA+GGVLTAALNEPG LPDRPAT+ Sbjct 61 GRRGAITPALATLGFAVLPLLELASEEQQDRFLAGVARGGVLTAALNEPGTPLPDRPATT 120 Query 121 FVGGRLSGTKVGVGYAEQADWMLVTADNAVVVVSPTADGVRMVRTPTSNGSDEYVMTMDG 180 F GRLSGTK+GVGYA QADWM+VTAD+AVVVVSP ADGV++V+TPTSNGSDEY ++ G Sbjct 121 FADGRLSGTKIGVGYAAQADWMIVTADSAVVVVSPKADGVQVVQTPTSNGSDEYTVSFTG 180 Query 181 VAVADCDILADVAAHRVNQLALAVMGAYADGLVAGALRLTADYVANRKQFGKPLSTFQTV 240 VAVAD D+LA A RVNQLALA +GAYADGLV+GALRLTADYVANRKQFGKPLSTFQTV Sbjct 181 VAVADSDVLAGATAARVNQLALAAVGAYADGLVSGALRLTADYVANRKQFGKPLSTFQTV 240 Query 241 AAQLAEVYIASRTIDLVAKSVIWRLAEDLDAGDDLGVLGYWVTSQAPPAMQICHHLHGGM 300 AAQLAEVYIASRTIDLVAKSV+W L+E D DLGVLGYWV SQAPPAMQ+CHHLHGGM Sbjct 241 AAQLAEVYIASRTIDLVAKSVVWGLSEGRDVDHDLGVLGYWVASQAPPAMQLCHHLHGGM 300 Query 301 GMDVTYPMHRYYSTIKDLTRLLGGPSHRLELL 332 GMD+TYPMHRYYSTIKDLTRLLGGPSHRL+L+ Sbjct 301 GMDITYPMHRYYSTIKDLTRLLGGPSHRLDLM 332 >gi|41406621|ref|NP_959457.1| FadE28 [Mycobacterium avium subsp. paratuberculosis K-10] gi|41394970|gb|AAS02840.1| FadE28 [Mycobacterium avium subsp. paratuberculosis K-10] gi|336458411|gb|EGO37385.1| acyl-CoA dehydrogenase [Mycobacterium avium subsp. paratuberculosis S397] Length=362 Score = 556 bits (1433), Expect = 2e-156, Method: Compositional matrix adjust. Identities = 274/332 (83%), Positives = 300/332 (91%), Gaps = 0/332 (0%) Query 1 MDFDPTAEQQAVADVVTSVLERDISWEALVCGGVTALPVPERLGGDGVGLFEVGALLTEV 60 MDFDP+ QQAVADVVTSVL+R++SWEALV GGVTALPVPERLGGDGVGL EV +LTEV Sbjct 7 MDFDPSPTQQAVADVVTSVLDRELSWEALVDGGVTALPVPERLGGDGVGLPEVATVLTEV 66 Query 61 GRHGAVTPALATLGLGVVPLLELASAEQQDRFLAGVAKGGVLTAALNEPGAALPDRPATS 120 GR GA+TPALATLG V+PLLELAS EQQDRFLAGVA+GGVLTAALNEPG LPDRPAT+ Sbjct 67 GRRGAITPALATLGFAVLPLLELASEEQQDRFLAGVARGGVLTAALNEPGTPLPDRPATT 126 Query 121 FVGGRLSGTKVGVGYAEQADWMLVTADNAVVVVSPTADGVRMVRTPTSNGSDEYVMTMDG 180 F GRLSGTK+GVGYA QADWM+VTAD+AVVVVSP ADGV++V+TPTSNGSDEY ++ G Sbjct 127 FADGRLSGTKIGVGYAAQADWMIVTADSAVVVVSPKADGVQVVQTPTSNGSDEYTVSFTG 186 Query 181 VAVADCDILADVAAHRVNQLALAVMGAYADGLVAGALRLTADYVANRKQFGKPLSTFQTV 240 VAVAD D+LA A RVNQLALA +GAYADGLV+GALRLTADYVANRKQFGKPLSTFQTV Sbjct 187 VAVADSDVLAGATAARVNQLALAAVGAYADGLVSGALRLTADYVANRKQFGKPLSTFQTV 246 Query 241 AAQLAEVYIASRTIDLVAKSVIWRLAEDLDAGDDLGVLGYWVTSQAPPAMQICHHLHGGM 300 AAQLAEVYIASRTIDLVAKSV+W L+E D DLGVLGYWV SQAPPAMQ+CHHLHGGM Sbjct 247 AAQLAEVYIASRTIDLVAKSVVWGLSEGRDVDHDLGVLGYWVASQAPPAMQLCHHLHGGM 306 Query 301 GMDVTYPMHRYYSTIKDLTRLLGGPSHRLELL 332 GMD+TYPMHRYYSTIKDLTRLLGGPSHRL+L+ Sbjct 307 GMDITYPMHRYYSTIKDLTRLLGGPSHRLDLV 338 >gi|118465978|ref|YP_879897.1| acyl-CoA dehydrogenase [Mycobacterium avium 104] gi|118167265|gb|ABK68162.1| putative acyl-CoA dehydrogenase [Mycobacterium avium 104] Length=362 Score = 556 bits (1432), Expect = 2e-156, Method: Compositional matrix adjust. Identities = 274/332 (83%), Positives = 300/332 (91%), Gaps = 0/332 (0%) Query 1 MDFDPTAEQQAVADVVTSVLERDISWEALVCGGVTALPVPERLGGDGVGLFEVGALLTEV 60 MDFDP+ QQAVADVVTSVL+R++SWEALV GGVTALPVPERLGGDGVGL EV +LTEV Sbjct 7 MDFDPSPTQQAVADVVTSVLDRELSWEALVDGGVTALPVPERLGGDGVGLPEVATVLTEV 66 Query 61 GRHGAVTPALATLGLGVVPLLELASAEQQDRFLAGVAKGGVLTAALNEPGAALPDRPATS 120 GR GA+TPALATLG V+PLLELAS EQQDRFLAGVA+GGVLTAALNEPG LPDRPAT+ Sbjct 67 GRRGAITPALATLGFAVLPLLELASEEQQDRFLAGVARGGVLTAALNEPGTPLPDRPATT 126 Query 121 FVGGRLSGTKVGVGYAEQADWMLVTADNAVVVVSPTADGVRMVRTPTSNGSDEYVMTMDG 180 F GRLSGTK+GVGYA QADWM+VTAD+AVVVVSP ADGV++V+TPTSNGSDEY ++ G Sbjct 127 FADGRLSGTKIGVGYAAQADWMIVTADSAVVVVSPKADGVQVVQTPTSNGSDEYTVSFTG 186 Query 181 VAVADCDILADVAAHRVNQLALAVMGAYADGLVAGALRLTADYVANRKQFGKPLSTFQTV 240 VAVAD D+LA A RVNQLALA +GAYADGLV+GALRLTADYVANRKQFGKPLSTFQTV Sbjct 187 VAVADSDVLAGATAARVNQLALAAVGAYADGLVSGALRLTADYVANRKQFGKPLSTFQTV 246 Query 241 AAQLAEVYIASRTIDLVAKSVIWRLAEDLDAGDDLGVLGYWVTSQAPPAMQICHHLHGGM 300 AAQLAEVYIASRTIDLVAKSV+W L+E D DLGVLGYWV SQAPPAMQ+CHHLHGGM Sbjct 247 AAQLAEVYIASRTIDLVAKSVVWGLSEGRDVDHDLGVLGYWVASQAPPAMQLCHHLHGGM 306 Query 301 GMDVTYPMHRYYSTIKDLTRLLGGPSHRLELL 332 GMD+TYPMHRYYSTIKDLTRLLGGPSHRL+L+ Sbjct 307 GMDITYPMHRYYSTIKDLTRLLGGPSHRLDLV 338 >gi|183984999|ref|YP_001853290.1| acyl-CoA dehydrogenase FadE28 [Mycobacterium marinum M] gi|183178325|gb|ACC43435.1| acyl-CoA dehydrogenase FadE28 [Mycobacterium marinum M] Length=343 Score = 548 bits (1412), Expect = 4e-154, Method: Compositional matrix adjust. Identities = 276/343 (81%), Positives = 299/343 (88%), Gaps = 4/343 (1%) Query 1 MDFDPTAEQQAVADVVTSVLERDISWEALVCGGVTALPVPERLGGDGVGLFEVGALLTEV 60 MDF+PTAEQQAVADVVTSVL RD++W ALV GGVTAL VPERLGGDGVGL EV +L EV Sbjct 1 MDFEPTAEQQAVADVVTSVLARDLTWTALVDGGVTALAVPERLGGDGVGLLEVSTVLAEV 60 Query 61 GRHGAVTPALATLGLGVVPLLELASAEQQDRFLAGVAKGGVLTAALNEPGAALPDRPATS 120 GRHGAVTPALATLGLGVVPLL LAS QQDR LAGVAKG VL+AALNEPG ALPDRPAT Sbjct 61 GRHGAVTPALATLGLGVVPLLALASEAQQDRILAGVAKGAVLSAALNEPGVALPDRPATR 120 Query 121 FVGGRLSGTKVGVGYAEQADWMLVTADNAVVVVSPTADGVRMVRTPTSNGSDEYVMTMDG 180 F GRLSGTK+GV YA QADW++VTAD AVVVVSP ADGV++V+TPTSNGS EY ++ Sbjct 121 FANGRLSGTKLGVAYAGQADWLIVTADGAVVVVSPKADGVQLVQTPTSNGSVEYTVSFHD 180 Query 181 VAVADCDILADVAAHRVNQLALAVMGAYADGLVAGALRLTADYVANRKQFGKPLSTFQTV 240 V V++ D+LA A RVNQLALA++GAYADGLVAGALRLTADYVANRKQFGKPLSTFQTV Sbjct 181 VVVSESDVLAGATAPRVNQLALAMLGAYADGLVAGALRLTADYVANRKQFGKPLSTFQTV 240 Query 241 AAQLAEVYIASRTIDLVAKSVIWRLA----EDLDAGDDLGVLGYWVTSQAPPAMQICHHL 296 AAQLAEVYIASRTIDL AKSVIWRLA D GDDL VLGYWVTSQAPP MQICHHL Sbjct 241 AAQLAEVYIASRTIDLAAKSVIWRLAAGRENDPQTGDDLDVLGYWVTSQAPPVMQICHHL 300 Query 297 HGGMGMDVTYPMHRYYSTIKDLTRLLGGPSHRLELLGARCSLT 339 HGGMGMDVTYPMHRYYSTIKDL+RLLGGP+HRL+L+GA+CS T Sbjct 301 HGGMGMDVTYPMHRYYSTIKDLSRLLGGPAHRLDLVGAQCSST 343 >gi|296166573|ref|ZP_06849003.1| probable acyl-CoA dehydrogenase [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295898059|gb|EFG77635.1| probable acyl-CoA dehydrogenase [Mycobacterium parascrofulaceum ATCC BAA-614] Length=337 Score = 547 bits (1409), Expect = 1e-153, Method: Compositional matrix adjust. Identities = 271/337 (81%), Positives = 297/337 (89%), Gaps = 0/337 (0%) Query 1 MDFDPTAEQQAVADVVTSVLERDISWEALVCGGVTALPVPERLGGDGVGLFEVGALLTEV 60 MDF+ TA QQAVADVVTSVL RD+SW+ALV GGV ALPVPERLGGDGVGL EV +LTEV Sbjct 1 MDFNLTATQQAVADVVTSVLNRDLSWDALVSGGVPALPVPERLGGDGVGLPEVATVLTEV 60 Query 61 GRHGAVTPALATLGLGVVPLLELASAEQQDRFLAGVAKGGVLTAALNEPGAALPDRPATS 120 GRHGA+TPALATLGLGV+PLL+LAS EQQDRFLAGV KGGVLTAALNEPG ALPDRP+T+ Sbjct 61 GRHGAITPALATLGLGVMPLLDLASDEQQDRFLAGVPKGGVLTAALNEPGTALPDRPSTT 120 Query 121 FVGGRLSGTKVGVGYAEQADWMLVTADNAVVVVSPTADGVRMVRTPTSNGSDEYVMTMDG 180 F GRLSGTKV V YA ADW++VTAD+AVVVV+P ADGV++ TPTSNG+DEY +T Sbjct 121 FADGRLSGTKVAVPYAASADWIIVTADSAVVVVAPKADGVQLAHTPTSNGADEYTVTFVD 180 Query 181 VAVADCDILADVAAHRVNQLALAVMGAYADGLVAGALRLTADYVANRKQFGKPLSTFQTV 240 VAV D+LA RVNQLALA +GAYADGLVAGALRLTADYVANRKQFGKPLSTFQTV Sbjct 181 VAVDGSDVLAGATPSRVNQLALAAIGAYADGLVAGALRLTADYVANRKQFGKPLSTFQTV 240 Query 241 AAQLAEVYIASRTIDLVAKSVIWRLAEDLDAGDDLGVLGYWVTSQAPPAMQICHHLHGGM 300 AAQLAEVYIASRTIDL AKSV+WRL+E DA DDL VLGYW+TSQAPP MQ CHHLHGGM Sbjct 241 AAQLAEVYIASRTIDLAAKSVVWRLSEGRDADDDLDVLGYWITSQAPPVMQTCHHLHGGM 300 Query 301 GMDVTYPMHRYYSTIKDLTRLLGGPSHRLELLGARCS 337 GMD+TYPMHRYYSTIKDLTRLLGGPSHRL+L+GA+CS Sbjct 301 GMDITYPMHRYYSTIKDLTRLLGGPSHRLDLVGAQCS 337 >gi|118619290|ref|YP_907622.1| acyl-CoA dehydrogenase FadE28 [Mycobacterium ulcerans Agy99] gi|118571400|gb|ABL06151.1| acyl-CoA dehydrogenase FadE28 [Mycobacterium ulcerans Agy99] Length=343 Score = 545 bits (1405), Expect = 3e-153, Method: Compositional matrix adjust. Identities = 275/343 (81%), Positives = 298/343 (87%), Gaps = 4/343 (1%) Query 1 MDFDPTAEQQAVADVVTSVLERDISWEALVCGGVTALPVPERLGGDGVGLFEVGALLTEV 60 MDF+PTAEQQAVADVVTSVL RD++W ALV GGVTAL VPERLGGDGVGL EV +L EV Sbjct 1 MDFEPTAEQQAVADVVTSVLARDLTWTALVDGGVTALAVPERLGGDGVGLLEVSTVLAEV 60 Query 61 GRHGAVTPALATLGLGVVPLLELASAEQQDRFLAGVAKGGVLTAALNEPGAALPDRPATS 120 GRHGAVTPALATLGLGVVPLL LAS QQDR LAGVAKG VL+AALNEPG ALPDRPAT Sbjct 61 GRHGAVTPALATLGLGVVPLLALASEAQQDRILAGVAKGAVLSAALNEPGVALPDRPATR 120 Query 121 FVGGRLSGTKVGVGYAEQADWMLVTADNAVVVVSPTADGVRMVRTPTSNGSDEYVMTMDG 180 F GRLSGTK+GV YA QADW++VTAD AVVVVS ADGV++V+TPTSNGS EY ++ Sbjct 121 FANGRLSGTKLGVAYAGQADWLIVTADGAVVVVSSKADGVQLVQTPTSNGSVEYTVSFHD 180 Query 181 VAVADCDILADVAAHRVNQLALAVMGAYADGLVAGALRLTADYVANRKQFGKPLSTFQTV 240 V V++ D+LA A RVNQLALA++GAYADGLVAGALRLTADYVANRKQFGKPLSTFQTV Sbjct 181 VVVSESDVLAGATAPRVNQLALAMLGAYADGLVAGALRLTADYVANRKQFGKPLSTFQTV 240 Query 241 AAQLAEVYIASRTIDLVAKSVIWRLA----EDLDAGDDLGVLGYWVTSQAPPAMQICHHL 296 AAQLAEVYIASRTIDL AKSVIWRLA D GDDL VLGYWVTSQAPP MQICHHL Sbjct 241 AAQLAEVYIASRTIDLAAKSVIWRLAAGRENDPQTGDDLDVLGYWVTSQAPPVMQICHHL 300 Query 297 HGGMGMDVTYPMHRYYSTIKDLTRLLGGPSHRLELLGARCSLT 339 HGGMGMDVTYPMHRYYSTIKDL+RLLGGP+HRL+L+GA+CS T Sbjct 301 HGGMGMDVTYPMHRYYSTIKDLSRLLGGPAHRLDLVGAQCSST 343 >gi|342862370|ref|ZP_08719010.1| acyl-CoA dehydrogenase FadE28 [Mycobacterium colombiense CECT 3035] gi|342130041|gb|EGT83375.1| acyl-CoA dehydrogenase FadE28 [Mycobacterium colombiense CECT 3035] Length=341 Score = 545 bits (1403), Expect = 5e-153, Method: Compositional matrix adjust. Identities = 273/341 (81%), Positives = 298/341 (88%), Gaps = 4/341 (1%) Query 1 MDFDPTAEQQAVADVVTSVLERDISWEALVCGGVTALPVPERLGGDGVGLFEVGALLTEV 60 MDFD TA QQAVADVVTSV ER++SW+ALV GGVTAL VPERLGGDGVGL EV +LTE+ Sbjct 1 MDFDLTATQQAVADVVTSVSEREMSWDALVSGGVTALAVPERLGGDGVGLQEVATVLTEI 60 Query 61 GRHGAVTPALATLGLGVVPLLELASAEQQDRFLAGVAKGGVLTAALNEPGAALPDRPATS 120 GRHGA+TPALATLG GV+PLL+LAS EQQDRFLAGVAKG VLTAALNEPG ALPDRP+T+ Sbjct 61 GRHGAITPALATLGFGVLPLLDLASDEQQDRFLAGVAKGAVLTAALNEPGTALPDRPSTT 120 Query 121 FVGGRLSGTKVGVGYAEQADWMLVTADNAVVVVSPTADGVRMVRTPTSNGSDEYVMTMDG 180 F GRLSGTKVGVGYA QADW+LVTAD+AVVVVS A GV V+TPTSNGS+EY +T Sbjct 121 FANGRLSGTKVGVGYAGQADWILVTADSAVVVVSAKAKGVEAVQTPTSNGSEEYTVTFAD 180 Query 181 VAVADCDILADVAAHRVNQLALAVMGAYADGLVAGALRLTADYVANRKQFGKPLSTFQTV 240 VAV D D+LA A RVNQL LA +GAYADGLVAGALRLTADYVANRKQFGKPLSTFQTV Sbjct 181 VAVGDSDVLAGATASRVNQLVLAAVGAYADGLVAGALRLTADYVANRKQFGKPLSTFQTV 240 Query 241 AAQLAEVYIASRTIDLVAKSVIWRLAEDLDAG----DDLGVLGYWVTSQAPPAMQICHHL 296 AAQLAEVYIASRTIDLVAKSV+W L+E + DDL VLGYWVTSQAPP MQICHHL Sbjct 241 AAQLAEVYIASRTIDLVAKSVVWGLSERGGSAPQVVDDLDVLGYWVTSQAPPVMQICHHL 300 Query 297 HGGMGMDVTYPMHRYYSTIKDLTRLLGGPSHRLELLGARCS 337 HGGMGMD+TYPMHRYYSTIKDL+RLLGGPSHRL+L+GA+CS Sbjct 301 HGGMGMDITYPMHRYYSTIKDLSRLLGGPSHRLDLVGAQCS 341 >gi|333992331|ref|YP_004524945.1| acyl-CoA dehydrogenase [Mycobacterium sp. JDM601] gi|333488299|gb|AEF37691.1| acyl-CoA dehydrogenase FadE28 [Mycobacterium sp. JDM601] Length=337 Score = 488 bits (1257), Expect = 4e-136, Method: Compositional matrix adjust. Identities = 244/338 (73%), Positives = 279/338 (83%), Gaps = 4/338 (1%) Query 1 MDFDPTAEQQAVADVVTSVLERDISWEALVCGGVTALPVPERLGGDGVGLFEVGALLTEV 60 MDF P EQQAVADVVTSVL+RD SWEALV GGV+AL VPERLGGDGVGL EV LTE+ Sbjct 1 MDFSPDPEQQAVADVVTSVLDRDNSWEALVAGGVSALAVPERLGGDGVGLSEVATALTEI 60 Query 61 GRHGAVTPALATLGLGVVPLLELASAEQQDRFLAGVAKGGVLTAALNEPGAALPDRPATS 120 GRHG V+PAL TLG G+VPLLELA+ QQDR+L+GVAKG VL+AAL+EP AALP++PA + Sbjct 61 GRHGTVSPALCTLGFGLVPLLELATDAQQDRYLSGVAKGAVLSAALDEPAAALPEQPAVT 120 Query 121 FVGGRLSGTKVGVGYAEQADWMLVTADNAVVVVSPTADGVRMVRTPTSNGSDEYVMTMDG 180 G RLSGTK+GV YAEQA+W+LVTAD+ V V+SP A GVR+ +TPT+N SDEY + D Sbjct 121 LAGNRLSGTKIGVPYAEQAEWILVTADSGVAVISPKAAGVRLTKTPTANHSDEYAVVFDD 180 Query 181 VAVADCDILADVAA-HRVNQLALAVMGAYADGLVAGALRLTADYVANRKQFGKPLSTFQT 239 A+ D + D A+ HRVNQL LA++GAYA GLVAGALRLTADYV +R+QFG+PLSTFQT Sbjct 181 ---AEADAVLDGASVHRVNQLVLAMVGAYASGLVAGALRLTADYVGSREQFGRPLSTFQT 237 Query 240 VAAQLAEVYIASRTIDLVAKSVIWRLAEDLDAGDDLGVLGYWVTSQAPPAMQICHHLHGG 299 VAAQL+EVYI SRTI L A SV+WRLA LDA DDLGVLGYW+TSQAPP MQ+CHHLHGG Sbjct 238 VAAQLSEVYIVSRTITLAATSVVWRLANGLDADDDLGVLGYWITSQAPPVMQLCHHLHGG 297 Query 300 MGMDVTYPMHRYYSTIKDLTRLLGGPSHRLELLGARCS 337 MGMDV YPM RYYSTIKDL RLLGG S+RL LG CS Sbjct 298 MGMDVDYPMDRYYSTIKDLNRLLGGRSNRLVTLGELCS 335 >gi|145222101|ref|YP_001132779.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium gilvum PYR-GCK] gi|145214587|gb|ABP43991.1| acyl-CoA dehydrogenase domain protein [Mycobacterium gilvum PYR-GCK] Length=333 Score = 479 bits (1233), Expect = 3e-133, Method: Compositional matrix adjust. Identities = 236/334 (71%), Positives = 278/334 (84%), Gaps = 1/334 (0%) Query 1 MDFDPTAEQQAVADVVTSVLERDISWEALVCGGVTALPVPERLGGDGVGLFEVGALLTEV 60 MDF P QQAVADVVTSVLERD +W+ALV GGVTAL VPERLGGDGVGL E+ LTE+ Sbjct 1 MDFSPDEGQQAVADVVTSVLERDNTWDALVSGGVTALAVPERLGGDGVGLAEIATALTEI 60 Query 61 GRHGAVTPALATLGLGVVPLLELASAEQQDRFLAGVAKGGVLTAALNEPGAALPDRPATS 120 GRHG V+PAL TLG V LL+LA+ QQ+R+LAGVAKG V+T ALNEPG +LPD P + Sbjct 61 GRHGTVSPALVTLGATAV-LLDLAADTQQNRYLAGVAKGSVVTLALNEPGVSLPDHPGVT 119 Query 121 FVGGRLSGTKVGVGYAEQADWMLVTADNAVVVVSPTADGVRMVRTPTSNGSDEYVMTMDG 180 GGRL+GTK+ VGYA QADW++VT D+ VVVV ADG+ + TPT+NG +E +T Sbjct 120 LAGGRLNGTKIAVGYAAQADWLVVTTDSGVVVVPGDADGIAVTVTPTANGGEEAAVTFTD 179 Query 181 VAVADCDILADVAAHRVNQLALAVMGAYADGLVAGALRLTADYVANRKQFGKPLSTFQTV 240 VAV+D D+LA RVNQL+LA +GA+A GLVAGALRLTADYVANR+QFG+PLSTFQTV Sbjct 180 VAVSDDDVLAGAEVSRVNQLSLAAIGAFAAGLVAGALRLTADYVANREQFGRPLSTFQTV 239 Query 241 AAQLAEVYIASRTIDLVAKSVIWRLAEDLDAGDDLGVLGYWVTSQAPPAMQICHHLHGGM 300 AAQL+EVYIASRTIDLV+ SV+WRL+E LDA DDL +LGYW+TSQAPPAM++CHHLHGGM Sbjct 240 AAQLSEVYIASRTIDLVSNSVVWRLSEGLDAEDDLAILGYWLTSQAPPAMRLCHHLHGGM 299 Query 301 GMDVTYPMHRYYSTIKDLTRLLGGPSHRLELLGA 334 GMD+TYPM RYYS+IKDLTRLLGGP+HRL+L+GA Sbjct 300 GMDITYPMDRYYSSIKDLTRLLGGPTHRLDLVGA 333 >gi|126437625|ref|YP_001073316.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium sp. JLS] gi|126237425|gb|ABO00826.1| acyl-CoA dehydrogenase domain protein [Mycobacterium sp. JLS] Length=336 Score = 478 bits (1229), Expect = 8e-133, Method: Compositional matrix adjust. Identities = 250/335 (75%), Positives = 281/335 (84%), Gaps = 2/335 (0%) Query 1 MDFDPTAEQQAVADVVTSVLERDISWEALVCGGVTALPVPERLGGDGVGLFEVGALLTEV 60 MDF P QQAVADVVT+VLERD SW+ALV GGVTAL VPERLGGDGVGL E+ LTE+ Sbjct 1 MDFSPDEGQQAVADVVTAVLERDNSWDALVSGGVTALGVPERLGGDGVGLAELATALTEI 60 Query 61 GRHGAVTPALATLGLGVVPLLELASAEQQDRFLAGVAKGGVLTAALNEPGAALPDRPATS 120 GR G ++PALAT+GLG+VPLL+LAS EQQDR+LAGVAKG +LTAALNEPG ALPDRPAT+ Sbjct 61 GRRGTISPALATVGLGLVPLLDLASDEQQDRYLAGVAKGAILTAALNEPGVALPDRPATT 120 Query 121 FVGGRLSGTKVGVGYAEQADWMLVTADNAVVVVSPTADGVRMVRTPTSNGSDEYVMTMDG 180 GGRL+GTKVGV YA A+++LV+ DN VVVVS +ADGV++ TPTSNG DE +T Sbjct 121 LTGGRLNGTKVGVPYAGAAEYILVSTDNGVVVVSASADGVQVTETPTSNGGDEAAVTFSD 180 Query 181 VAVADCDILAD--VAAHRVNQLALAVMGAYADGLVAGALRLTADYVANRKQFGKPLSTFQ 238 VAV D D+L A RVN LALA GA+A GLVAGALRLTADYVANR QFG+PLSTFQ Sbjct 181 VAVDDADVLGSGLEAVRRVNALALAATGAFAAGLVAGALRLTADYVANRHQFGRPLSTFQ 240 Query 239 TVAAQLAEVYIASRTIDLVAKSVIWRLAEDLDAGDDLGVLGYWVTSQAPPAMQICHHLHG 298 TVAAQLAEVYIASRT+DL A SV+WRLAE LDA DDL VLGYW+TSQAPP MQ CHHLHG Sbjct 241 TVAAQLAEVYIASRTLDLAANSVVWRLAEGLDAADDLEVLGYWLTSQAPPVMQTCHHLHG 300 Query 299 GMGMDVTYPMHRYYSTIKDLTRLLGGPSHRLELLG 333 GMGMD+TYPM RYYSTIKDL+RLLGGPSHRL+L+G Sbjct 301 GMGMDITYPMDRYYSTIKDLSRLLGGPSHRLDLVG 335 >gi|118472010|ref|YP_890220.1| acyl-CoA dehydrogenase [Mycobacterium smegmatis str. MC2 155] gi|118173297|gb|ABK74193.1| putative acyl-CoA dehydrogenase [Mycobacterium smegmatis str. MC2 155] Length=334 Score = 478 bits (1229), Expect = 8e-133, Method: Compositional matrix adjust. Identities = 244/334 (74%), Positives = 286/334 (86%), Gaps = 0/334 (0%) Query 1 MDFDPTAEQQAVADVVTSVLERDISWEALVCGGVTALPVPERLGGDGVGLFEVGALLTEV 60 MDF P EQQAVADVVTSVLERD SW+ALV GGVTAL VPERLGGDG+GL EV LTE+ Sbjct 1 MDFTPNPEQQAVADVVTSVLERDNSWDALVSGGVTALAVPERLGGDGLGLAEVATALTEI 60 Query 61 GRHGAVTPALATLGLGVVPLLELASAEQQDRFLAGVAKGGVLTAALNEPGAALPDRPATS 120 GR G V+PALATLGLG+VPLL+LAS QQDR+LA V KG VL+AAL+EPG LP +PAT+ Sbjct 61 GRRGTVSPALATLGLGLVPLLDLASEAQQDRYLAQVDKGAVLSAALSEPGRHLPQQPATT 120 Query 121 FVGGRLSGTKVGVGYAEQADWMLVTADNAVVVVSPTADGVRMVRTPTSNGSDEYVMTMDG 180 F GG L+GTK+GV YA A W++VTAD AVVVVSPTA GV + +TPT+NGSDEY +T Sbjct 121 FAGGVLNGTKIGVPYAGSAQWLVVTADTAVVVVSPTAAGVTLTKTPTANGSDEYAVTFAD 180 Query 181 VAVADCDILADVAAHRVNQLALAVMGAYADGLVAGALRLTADYVANRKQFGKPLSTFQTV 240 VAV+D D+LA A RVNQLALA +GA+ GLVAGALRLTADYVA R+QFG+PLSTFQTV Sbjct 181 VAVSDDDVLAGATATRVNQLALAAIGAFGAGLVAGALRLTADYVATREQFGRPLSTFQTV 240 Query 241 AAQLAEVYIASRTIDLVAKSVIWRLAEDLDAGDDLGVLGYWVTSQAPPAMQICHHLHGGM 300 AAQL+EVYIASRTIDLV+ SV+WRL+E LDA +DL +LG+W+T+QAPPAM++CHHLHGGM Sbjct 241 AAQLSEVYIASRTIDLVSTSVVWRLSEGLDAEEDLAILGFWLTTQAPPAMRLCHHLHGGM 300 Query 301 GMDVTYPMHRYYSTIKDLTRLLGGPSHRLELLGA 334 GMD+TYPM RY+S+IKDLTRLLGGP+HRL+L+GA Sbjct 301 GMDITYPMDRYFSSIKDLTRLLGGPAHRLDLVGA 334 >gi|108801639|ref|YP_641836.1| acyl-CoA dehydrogenase-like protein [Mycobacterium sp. MCS] gi|119870790|ref|YP_940742.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium sp. KMS] gi|108772058|gb|ABG10780.1| acyl-CoA dehydrogenase-like protein [Mycobacterium sp. MCS] gi|119696879|gb|ABL93952.1| acyl-CoA dehydrogenase domain protein [Mycobacterium sp. KMS] Length=336 Score = 476 bits (1224), Expect = 3e-132, Method: Compositional matrix adjust. Identities = 249/335 (75%), Positives = 282/335 (85%), Gaps = 2/335 (0%) Query 1 MDFDPTAEQQAVADVVTSVLERDISWEALVCGGVTALPVPERLGGDGVGLFEVGALLTEV 60 MDF P QQAVADVVT+VLERD +W+ALV GGVTAL VPERLGGDGVGL E+ LTE+ Sbjct 1 MDFSPDEGQQAVADVVTAVLERDNTWDALVSGGVTALGVPERLGGDGVGLAELATALTEI 60 Query 61 GRHGAVTPALATLGLGVVPLLELASAEQQDRFLAGVAKGGVLTAALNEPGAALPDRPATS 120 GR G ++PALAT+GLG+VPLL+LAS EQQDR+LAGVAKG +LTAALNEPG ALPDRPAT+ Sbjct 61 GRRGTISPALATVGLGLVPLLDLASDEQQDRYLAGVAKGAILTAALNEPGVALPDRPATT 120 Query 121 FVGGRLSGTKVGVGYAEQADWMLVTADNAVVVVSPTADGVRMVRTPTSNGSDEYVMTMDG 180 VG RL+GTKVGV YA +A+++LV+ DN VVVVS +ADGV++ TPTSNG DE +T Sbjct 121 LVGDRLNGTKVGVPYAGRAEYILVSTDNGVVVVSASADGVQVTETPTSNGGDEAAVTFSD 180 Query 181 VAVADCDIL--ADVAAHRVNQLALAVMGAYADGLVAGALRLTADYVANRKQFGKPLSTFQ 238 VAV D D+L A RVN LALA GA+A GLVAGALRLTADYVANR QFG+PLSTFQ Sbjct 181 VAVDDADVLGSGSEAVRRVNALALAATGAFAAGLVAGALRLTADYVANRHQFGRPLSTFQ 240 Query 239 TVAAQLAEVYIASRTIDLVAKSVIWRLAEDLDAGDDLGVLGYWVTSQAPPAMQICHHLHG 298 TVAAQLAEVYIASRT+DL A SV+WRLAE LDA DDL VLGYW+TSQAPP MQ CHHLHG Sbjct 241 TVAAQLAEVYIASRTLDLAANSVVWRLAEGLDAADDLEVLGYWLTSQAPPVMQTCHHLHG 300 Query 299 GMGMDVTYPMHRYYSTIKDLTRLLGGPSHRLELLG 333 GMGMD+TYPM RYYSTIKDL+RLLGGPSHRL+L+G Sbjct 301 GMGMDITYPMDRYYSTIKDLSRLLGGPSHRLDLVG 335 >gi|120406205|ref|YP_956034.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium vanbaalenii PYR-1] gi|119959023|gb|ABM16028.1| acyl-CoA dehydrogenase domain protein [Mycobacterium vanbaalenii PYR-1] Length=333 Score = 470 bits (1209), Expect = 2e-130, Method: Compositional matrix adjust. Identities = 239/334 (72%), Positives = 274/334 (83%), Gaps = 1/334 (0%) Query 1 MDFDPTAEQQAVADVVTSVLERDISWEALVCGGVTALPVPERLGGDGVGLFEVGALLTEV 60 MDF P QQAVADVVTSVLERD +W+ALV GGVTAL VPERLGGDGVG E+ LTE+ Sbjct 1 MDFSPDEGQQAVADVVTSVLERDNTWDALVSGGVTALGVPERLGGDGVGFAEMATALTEI 60 Query 61 GRHGAVTPALATLGLGVVPLLELASAEQQDRFLAGVAKGGVLTAALNEPGAALPDRPATS 120 GRHG ++PAL TLG V LL+LAS QQDR+L GVAKG VLT ALNEPGA LPDRPA + Sbjct 61 GRHGTISPALVTLGTTAV-LLDLASEAQQDRYLGGVAKGSVLTLALNEPGAQLPDRPAVA 119 Query 121 FVGGRLSGTKVGVGYAEQADWMLVTADNAVVVVSPTADGVRMVRTPTSNGSDEYVMTMDG 180 G+L+GTKVGVGYA QADW++VT DN VVVV ADG+ + +TPTSNGSDEYV+ Sbjct 120 LAAGKLNGTKVGVGYAAQADWIVVTTDNGVVVVPGKADGLTVTKTPTSNGSDEYVLAFAD 179 Query 181 VAVADCDILADVAAHRVNQLALAVMGAYADGLVAGALRLTADYVANRKQFGKPLSTFQTV 240 VAVAD D+L HRVNQL LA +GA++ GLVAGALRLTADYVA R+QFG+PLSTFQTV Sbjct 180 VAVADADVLEGATPHRVNQLVLAAVGAFSAGLVAGALRLTADYVATREQFGRPLSTFQTV 239 Query 241 AAQLAEVYIASRTIDLVAKSVIWRLAEDLDAGDDLGVLGYWVTSQAPPAMQICHHLHGGM 300 AAQL+EVYIASRTI L++ SV W+L E DA DDL +LGYW+ SQAPPAM++CHHLHGGM Sbjct 240 AAQLSEVYIASRTISLLSTSVAWQLTEGRDAADDLAILGYWLASQAPPAMRLCHHLHGGM 299 Query 301 GMDVTYPMHRYYSTIKDLTRLLGGPSHRLELLGA 334 GMD+TYPM RYYS+IKDLTRLLGGPSHRL+L+GA Sbjct 300 GMDITYPMDRYYSSIKDLTRLLGGPSHRLDLVGA 333 >gi|315442541|ref|YP_004075420.1| acyl-CoA dehydrogenase [Mycobacterium sp. Spyr1] gi|315260844|gb|ADT97585.1| acyl-CoA dehydrogenase [Mycobacterium sp. Spyr1] Length=333 Score = 460 bits (1184), Expect = 1e-127, Method: Compositional matrix adjust. Identities = 237/334 (71%), Positives = 278/334 (84%), Gaps = 1/334 (0%) Query 1 MDFDPTAEQQAVADVVTSVLERDISWEALVCGGVTALPVPERLGGDGVGLFEVGALLTEV 60 MDF P QQAVADVVTSVLER+ +WEALV GGVTAL VPERLGGDGVGL E+ LTE+ Sbjct 1 MDFSPDEGQQAVADVVTSVLERENTWEALVSGGVTALAVPERLGGDGVGLAEIATALTEI 60 Query 61 GRHGAVTPALATLGLGVVPLLELASAEQQDRFLAGVAKGGVLTAALNEPGAALPDRPATS 120 GR G V+PAL TLG V LL+LA+ +QQDR+LA V KG V+T ALNEPGA+LPD PA + Sbjct 61 GRRGTVSPALVTLGATAV-LLDLATEDQQDRYLAAVGKGSVVTLALNEPGASLPDHPAVT 119 Query 121 FVGGRLSGTKVGVGYAEQADWMLVTADNAVVVVSPTADGVRMVRTPTSNGSDEYVMTMDG 180 GRL+GTK+ VGYA QADW++VT D+ VVVV ADG+ + TPT+NG +E +T D Sbjct 120 LAAGRLNGTKIAVGYAAQADWLIVTTDSGVVVVPGDADGLTVTVTPTANGGEEAAVTFDD 179 Query 181 VAVADCDILADVAAHRVNQLALAVMGAYADGLVAGALRLTADYVANRKQFGKPLSTFQTV 240 VAVAD D+LA RVNQL+LA +GA+A GLVAGALRLTADYVANR+QFG+PLSTFQTV Sbjct 180 VAVADDDVLAGAEVSRVNQLSLAAIGAFAAGLVAGALRLTADYVANREQFGRPLSTFQTV 239 Query 241 AAQLAEVYIASRTIDLVAKSVIWRLAEDLDAGDDLGVLGYWVTSQAPPAMQICHHLHGGM 300 AAQL+EVYIASRTIDLV+ SV+WRL+E LDA DDL +LGYW+TSQAPPAM++CHHLHGGM Sbjct 240 AAQLSEVYIASRTIDLVSNSVVWRLSEGLDAEDDLAILGYWLTSQAPPAMRLCHHLHGGM 299 Query 301 GMDVTYPMHRYYSTIKDLTRLLGGPSHRLELLGA 334 GMD+TYPM RYYS+IKDLTRLLGGP+HRL+L+GA Sbjct 300 GMDITYPMDRYYSSIKDLTRLLGGPTHRLDLVGA 333 >gi|169627717|ref|YP_001701366.1| acyl-CoA dehydrogenase FadE [Mycobacterium abscessus ATCC 19977] gi|169239684|emb|CAM60712.1| Probable acyl-CoA dehydrogenase FadE [Mycobacterium abscessus] Length=353 Score = 384 bits (986), Expect = 1e-104, Method: Compositional matrix adjust. Identities = 199/351 (57%), Positives = 258/351 (74%), Gaps = 18/351 (5%) Query 1 MDFDPTAEQQAVADVVTSVL-ERDI------------SWEALVCGGVTALPVPERLGGDG 47 MDF EQQAV+DVV +VL +R+ +W AL GV +L +PERLGGDG Sbjct 1 MDFAFAEEQQAVSDVVEAVLADREFVGVVPEIGYDEAAWRALAANGVLSLALPERLGGDG 60 Query 48 VGLFEVGALLTEVGRHGAVTPALATLGLGVVPLLELASAEQQDRFLAGVAKGGVLTAALN 107 +GL EV L +G+HGA+TPALATLG GVVPL+ELAS EQQDR+LAGV G +LTAAL+ Sbjct 61 LGLAEVSVALRVLGKHGALTPALATLGFGVVPLVELASGEQQDRYLAGVGDGAILTAALD 120 Query 108 EPGAALPDRPATSFV--GGRL--SGTKVGVGYAEQADWMLVTADNAVVVVSPTADGVRMV 163 EPG A+P PA S V G L +G K+GV +A +A W+LVT DN VVVV+P GV + Sbjct 121 EPGRAVPSAPAVSAVRDGSSLVLNGRKIGVLHAAEAHWILVTTDNGVVVVAPNTPGVTIT 180 Query 164 RTPTSNGSDEYVMTMDGVAVADCDILADVAAHRVNQLALAVMGAYADGLVAGALRLTADY 223 RTPT++ + EY +T V+V D L+ + R+N+LALA +G+YADGLV+GALRLTAD+ Sbjct 181 RTPTASKAAEYAVTFSDVSVPAADQLSG-SVQRLNELALAAIGSYADGLVSGALRLTADH 239 Query 224 VANRKQFGKPLSTFQTVAAQLAEVYIASRTIDLVAKSVIWRLAEDLDAGDDLGVLGYWVT 283 V+NR QFGKPL+TFQ V+ QLA+VY+ SRT++L S +WRL E LDA +DL ++ +W+ Sbjct 240 VSNRVQFGKPLATFQAVSQQLADVYVVSRTLNLGVTSAVWRLCEGLDATEDLDIVSFWMA 299 Query 284 SQAPPAMQICHHLHGGMGMDVTYPMHRYYSTIKDLTRLLGGPSHRLELLGA 334 ++A MQICHHLHGG+G+D+TYPM+RYYSTIKDL+RL+GG S RL++L A Sbjct 300 AEAQRVMQICHHLHGGLGVDITYPMNRYYSTIKDLSRLVGGSSERLDVLAA 350 >gi|226304197|ref|YP_002764155.1| acyl-CoA dehydrogenase [Rhodococcus erythropolis PR4] gi|226183312|dbj|BAH31416.1| putative acyl-CoA dehydrogenase [Rhodococcus erythropolis PR4] Length=346 Score = 328 bits (841), Expect = 7e-88, Method: Compositional matrix adjust. Identities = 173/345 (51%), Positives = 233/345 (68%), Gaps = 9/345 (2%) Query 1 MDFDPTAEQQAVADVVTSVLERDIS----WEALVCGGVTALPVPERLGGDGVGLFEVGAL 56 MDF P Q+AVA+V T++L R++ W A + L +PERLGG+G+ + +VG+L Sbjct 1 MDFTPDETQEAVAEVATALLARELEPDALWAAFAEADLLTLALPERLGGEGLSVTDVGSL 60 Query 57 LTEVGRHGAVTPALATLGLGVVPLLELASAEQQDRFLAGVAKGGVLTAALNEPGAALPDR 116 L EVGR A PALATLG GV+P++ L + QQD L GV+ G V TAAL EPG P + Sbjct 61 LVEVGRAAAPIPALATLGFGVLPIVALGTDAQQDELLTGVSAGRVFTAALGEPGQQFPAQ 120 Query 117 PATSFVGG----RLSGTKVGVGYAEQADWMLVTADNAVVVVSPTADGVRMVRTPTSNGSD 172 P+T+ R+SGT + V +A A +LV D VV+V PTA GV + TP+++GS Sbjct 121 PSTTAHQSGDWYRVSGTVLAVPFAASAHRILVPTDAGVVLVDPTAAGVALTPTPSASGSP 180 Query 173 EYVMTMDGVAVADCDILADVAAHRVNQLALAVMGAYADGLVAGALRLTADYVANRKQFGK 232 E+ +TMD AV + D A + ++A A +GA ADGLV+GA+ LTA +V +R+QFGK Sbjct 181 EFAVTMDE-AVGELLGAGDEAVQTLYRIATASIGAVADGLVSGAVDLTAAHVGSREQFGK 239 Query 233 PLSTFQTVAAQLAEVYIASRTIDLVAKSVIWRLAEDLDAGDDLGVLGYWVTSQAPPAMQI 292 PL+TFQ V+ Q+A+ Y+ SRT+ + A S WR++E LDA DL V+ YW+ + P MQ+ Sbjct 240 PLATFQAVSQQIADAYVTSRTLHVAALSASWRVSEGLDAQSDLDVMAYWIAQEVPATMQV 299 Query 293 CHHLHGGMGMDVTYPMHRYYSTIKDLTRLLGGPSHRLELLGARCS 337 HHLHGG+G+DVTYP+HRYYST KDL RLLGG S RL+L+GARCS Sbjct 300 LHHLHGGLGVDVTYPLHRYYSTAKDLARLLGGASQRLDLVGARCS 344 >gi|229494394|ref|ZP_04388157.1| FadE28 [Rhodococcus erythropolis SK121] gi|229318756|gb|EEN84614.1| FadE28 [Rhodococcus erythropolis SK121] Length=346 Score = 326 bits (835), Expect = 4e-87, Method: Compositional matrix adjust. Identities = 172/345 (50%), Positives = 232/345 (68%), Gaps = 9/345 (2%) Query 1 MDFDPTAEQQAVADVVTSVLERDIS----WEALVCGGVTALPVPERLGGDGVGLFEVGAL 56 MDF P Q+AVA+V T++L R++ W A + L +PERLGG+G+ + +VG+L Sbjct 1 MDFTPDETQEAVAEVATALLARELEPDALWAAFADADLLTLALPERLGGEGLSVADVGSL 60 Query 57 LTEVGRHGAVTPALATLGLGVVPLLELASAEQQDRFLAGVAKGGVLTAALNEPGAALPDR 116 L EVGR A PALATLG GV+P++ L + QQD L GV G V TAAL EPG P + Sbjct 61 LVEVGRAAAPIPALATLGFGVLPIVALGTDAQQDELLTGVGAGRVFTAALGEPGQQFPAQ 120 Query 117 PATSFVGG----RLSGTKVGVGYAEQADWMLVTADNAVVVVSPTADGVRMVRTPTSNGSD 172 P+T+ R+SGT + V +A A +LV D VV+V PTA GV + TP+++GS Sbjct 121 PSTTAQQSGDWYRVSGTVLAVPFAASAHRILVPTDAGVVLVDPTAAGVALTPTPSASGSP 180 Query 173 EYVMTMDGVAVADCDILADVAAHRVNQLALAVMGAYADGLVAGALRLTADYVANRKQFGK 232 E+ +TMD AV + + A + ++A A +GA ADGLV+GA+ LTA +V +R+QFGK Sbjct 181 EFAVTMDE-AVGELLGAGEEAVQTLYRIATASIGAVADGLVSGAVDLTAAHVGSREQFGK 239 Query 233 PLSTFQTVAAQLAEVYIASRTIDLVAKSVIWRLAEDLDAGDDLGVLGYWVTSQAPPAMQI 292 PL+TFQ V+ Q+A+ Y+ SRT+ + A S WR++E LDA DL V+ YW+ + P MQ+ Sbjct 240 PLATFQAVSQQIADAYVTSRTLHVAALSASWRVSEGLDAQSDLDVMAYWIAQEVPATMQV 299 Query 293 CHHLHGGMGMDVTYPMHRYYSTIKDLTRLLGGPSHRLELLGARCS 337 HHLHGG+G+DVTYP+HRYYST KDL RLLGG S RL+L+GARCS Sbjct 300 LHHLHGGLGVDVTYPLHRYYSTAKDLARLLGGASQRLDLVGARCS 344 >gi|111021456|ref|YP_704428.1| acyl-CoA dehydrogenase [Rhodococcus jostii RHA1] gi|110820986|gb|ABG96270.1| probable acyl-CoA dehydrogenase [Rhodococcus jostii RHA1] Length=346 Score = 323 bits (828), Expect = 3e-86, Method: Compositional matrix adjust. Identities = 172/347 (50%), Positives = 234/347 (68%), Gaps = 13/347 (3%) Query 1 MDFDPTAEQQAVADVVTSVLERDIS----WEALVCGGVTALPVPERLGGDGVGLFEVGAL 56 MDF Q+AVA V +L RD+ W A + L +PERLGG+G+ + +VGAL Sbjct 1 MDFTRDETQEAVAQVAAGLLARDLDDDALWAAFADADLLTLALPERLGGEGLSVTDVGAL 60 Query 57 LTEVGRHGAVTPALATLGLGVVPLLELASAEQQDRFLAGVAKGGVLTAALNEPGAALPDR 116 LTEVGR A PALATLG GV+P++ L QQD L G+A G TAAL EPGA P R Sbjct 61 LTEVGRKAARVPALATLGFGVLPIVALGDDAQQDALLTGLADGRTFTAALAEPGAQFPAR 120 Query 117 PATSFV----GGRLSGTKVGVGYAEQADWMLVTADNAVVVVSPTADGVRMVRTPTSNGSD 172 P+ + V G ++G + V +AE+A +LV D VV+V P A+GV + TP+++GS Sbjct 121 PSVTAVADGNGYSVTGRVLAVPFAERAHRILVPTDTGVVLVDPGAEGVTLTPTPSASGSP 180 Query 173 EYVMTMDGVAVADCDILA--DVAAHRVNQLALAVMGAYADGLVAGALRLTADYVANRKQF 230 E+ + DG A ++LA D A + ++ALA +GA ADGL++GA L +++A R QF Sbjct 181 EFAIMFDG---ARGELLAAGDDAVQTLYRIALASIGAVADGLLSGATVLAGEHLATRHQF 237 Query 231 GKPLSTFQTVAAQLAEVYIASRTIDLVAKSVIWRLAEDLDAGDDLGVLGYWVTSQAPPAM 290 GKPL+TFQ V+ Q+A+VY+ SRT+ + A + WR++E LDA DDL V+ YW+ ++ P AM Sbjct 238 GKPLATFQAVSQQIADVYVTSRTLHVSALAASWRVSEGLDAQDDLDVMAYWIAAEVPAAM 297 Query 291 QICHHLHGGMGMDVTYPMHRYYSTIKDLTRLLGGPSHRLELLGARCS 337 Q+ HHLHGG+G+DVTYP+HRYYST KDL RL+GG S+RL+L+GARCS Sbjct 298 QVLHHLHGGIGVDVTYPLHRYYSTAKDLARLVGGASYRLDLVGARCS 344 >gi|226363822|ref|YP_002781604.1| acyl-CoA dehydrogenase [Rhodococcus opacus B4] gi|226242311|dbj|BAH52659.1| putative acyl-CoA dehydrogenase [Rhodococcus opacus B4] Length=346 Score = 321 bits (823), Expect = 1e-85, Method: Compositional matrix adjust. Identities = 173/347 (50%), Positives = 232/347 (67%), Gaps = 13/347 (3%) Query 1 MDFDPTAEQQAVADVVTSVLERDIS----WEALVCGGVTALPVPERLGGDGVGLFEVGAL 56 MDF Q+AVA V +L RD+ W A + L +PERLGG+G+ + +VGAL Sbjct 1 MDFTRDETQEAVAQVAAGLLARDLDGDALWAAFADADLLTLALPERLGGEGLSVTDVGAL 60 Query 57 LTEVGRHGAVTPALATLGLGVVPLLELASAEQQDRFLAGVAKGGVLTAALNEPGAALPDR 116 LTEVGR A PALATLG GV+P++ L QD L G+A G TA L EPGA P R Sbjct 61 LTEVGRKAAQVPALATLGFGVLPIVALGDDATQDALLTGLADGRTFTATLAEPGAQFPAR 120 Query 117 PATSFV----GGRLSGTKVGVGYAEQADWMLVTADNAVVVVSPTADGVRMVRTPTSNGSD 172 P+ + V G ++G + V +AE A +LV D VV+V P ADGV + TP+++GS Sbjct 121 PSVTAVADGDGYSVTGRVLAVPFAEGAHRILVPTDAGVVLVDPGADGVTLAPTPSASGSP 180 Query 173 EYVMTMDGVAVADCDILA--DVAAHRVNQLALAVMGAYADGLVAGALRLTADYVANRKQF 230 E+ +T DG A +LA D A + ++ALA +GA ADGL++GA L A+++A R QF Sbjct 181 EFAITFDG---ARGALLAAGDDAVQALYRIALASIGAVADGLLSGATALAAEHLATRHQF 237 Query 231 GKPLSTFQTVAAQLAEVYIASRTIDLVAKSVIWRLAEDLDAGDDLGVLGYWVTSQAPPAM 290 GKPL+TFQ V+ Q+A+VY+ SRT+ + A + WR++E LDA DDL V+ YW+ ++ P AM Sbjct 238 GKPLATFQAVSQQIADVYVTSRTLHVSALAASWRVSEGLDAQDDLDVMAYWIAAEVPAAM 297 Query 291 QICHHLHGGMGMDVTYPMHRYYSTIKDLTRLLGGPSHRLELLGARCS 337 Q+ HHLHGG+G+DVTYP+HRYYST KDL RL+GG S+RL+L+GARCS Sbjct 298 QVLHHLHGGIGVDVTYPLHRYYSTAKDLARLVGGASYRLDLVGARCS 344 >gi|312138118|ref|YP_004005454.1| acyl-CoA dehydrogenase [Rhodococcus equi 103S] gi|311887457|emb|CBH46769.1| putative acyl-CoA dehydrogenase [Rhodococcus equi 103S] Length=357 Score = 318 bits (814), Expect = 1e-84, Method: Compositional matrix adjust. Identities = 179/355 (51%), Positives = 239/355 (68%), Gaps = 18/355 (5%) Query 1 MDFDPTAEQQAVADVVTSVLERDIS------------WEALVCGGVTALPVPERLGGDGV 48 MDF Q+ VA++V +L R+ + W+AL + +L VPERLGGDG+ Sbjct 1 MDFSLDQTQETVAEIVVGLLAREHTDPADTGGFSPELWQALAKADLLSLAVPERLGGDGL 60 Query 49 GLFEVGALLTEVGRHGAVTPALATLGLGVVPLLELASAEQQDRFLAGVAKGGVLTAALNE 108 G+ EV +LTE+GR A PALATLG GV+P+L L SA+QQD L G+A G VLTAAL E Sbjct 61 GVLEVATMLTEIGRGAAPVPALATLGFGVLPVLALGSAQQQDALLDGIAGGRVLTAALAE 120 Query 109 PGAALPDRPATSFV----GGRLSGTKVGVGYAEQADWMLVTADNAVVVVSPTADGVRMVR 164 GAA P P+T+ V G ++G K+ V +A+ A +LV D VV+V+P A GV + Sbjct 121 QGAAFPSVPSTTAVADGDGVVVTGHKIAVPFADIAHRILVPTDAGVVLVAPDAPGVTLTP 180 Query 165 TPTSNGSDEYVMTMDGVAVADCDILAD--VAAHRVNQLALAVMGAYADGLVAGALRLTAD 222 + TS+G E+ + +D V V D+L D +N++ALA +GAYADGL+AGA L AD Sbjct 181 SATSSGGPEFSLRLDAVRVPAGDVLGDGIDGVATLNRIALASIGAYADGLLAGATALAAD 240 Query 223 YVANRKQFGKPLSTFQTVAAQLAEVYIASRTIDLVAKSVIWRLAEDLDAGDDLGVLGYWV 282 ++ R+QFGKPL+ FQ VA Q+A+VY+ SRT+ + A + WR+AE LDA DDL VL YW+ Sbjct 241 HLTTREQFGKPLAAFQAVAQQIADVYVTSRTLHVSALASAWRVAEGLDAADDLDVLAYWI 300 Query 283 TSQAPPAMQICHHLHGGMGMDVTYPMHRYYSTIKDLTRLLGGPSHRLELLGARCS 337 S+ P AM+ HHLHGG+G+DVTYPMHRY+S KDL RL+GG S+RL+L+GARCS Sbjct 301 ASEIPAAMRTLHHLHGGIGVDVTYPMHRYFSIAKDLARLVGGASYRLDLVGARCS 355 >gi|325674977|ref|ZP_08154664.1| acyl-CoA dehydrogenase [Rhodococcus equi ATCC 33707] gi|325554563|gb|EGD24238.1| acyl-CoA dehydrogenase [Rhodococcus equi ATCC 33707] Length=357 Score = 312 bits (799), Expect = 6e-83, Method: Compositional matrix adjust. Identities = 177/355 (50%), Positives = 236/355 (67%), Gaps = 18/355 (5%) Query 1 MDFDPTAEQQAVADVVTSVLERDIS------------WEALVCGGVTALPVPERLGGDGV 48 MDF Q+ VA++V +L R+ + W+AL + +L VPERLGGDG+ Sbjct 1 MDFSLDQTQETVAEIVVGLLAREHTDPADTGGFSPELWQALAKADLLSLAVPERLGGDGL 60 Query 49 GLFEVGALLTEVGRHGAVTPALATLGLGVVPLLELASAEQQDRFLAGVAKGGVLTAALNE 108 G+ EV +LTE+GR A PALATLG GV+P+L L SA+QQD L G+A G VLTAAL E Sbjct 61 GVLEVATMLTEIGRGAAPVPALATLGFGVLPVLALGSAQQQDALLDGIAGGRVLTAALAE 120 Query 109 PGAALPDRPATSFVGGR----LSGTKVGVGYAEQADWMLVTADNAVVVVSPTADGVRMVR 164 GAA P P+T+ ++G K+ V +A+ A +LV D VV+V+P A GV + Sbjct 121 QGAAFPSVPSTTADADGDDVVVTGHKIAVPFADIAHRILVPTDAGVVLVAPDAPGVTLTP 180 Query 165 TPTSNGSDEYVMTMDGVAVADCDILAD--VAAHRVNQLALAVMGAYADGLVAGALRLTAD 222 TS+G E+ + +D V V D+L D +N++ALA +GAYADGL+AGA L AD Sbjct 181 GATSSGGPEFSLRLDAVRVPAGDVLGDGIDGVATLNRIALASIGAYADGLLAGATALAAD 240 Query 223 YVANRKQFGKPLSTFQTVAAQLAEVYIASRTIDLVAKSVIWRLAEDLDAGDDLGVLGYWV 282 ++ R+QFGKPL+ FQ VA Q+A+VY+ SRT+ + A + WR+AE LDA DDL VL YW+ Sbjct 241 HLTTREQFGKPLAAFQAVAQQIADVYVTSRTLHVSALASAWRVAEGLDAADDLDVLAYWI 300 Query 283 TSQAPPAMQICHHLHGGMGMDVTYPMHRYYSTIKDLTRLLGGPSHRLELLGARCS 337 S+ P AM+ HHLHGG+G+DVTYPMHRY+S KDL RL+GG S+RL+L+GARCS Sbjct 301 ASEIPAAMRTLHHLHGGIGVDVTYPMHRYFSIAKDLARLVGGASYRLDLVGARCS 355 >gi|119717014|ref|YP_923979.1| acyl-CoA dehydrogenase domain-containing protein [Nocardioides sp. JS614] gi|119537675|gb|ABL82292.1| acyl-CoA dehydrogenase domain protein [Nocardioides sp. JS614] Length=743 Score = 260 bits (665), Expect = 2e-67, Method: Compositional matrix adjust. Identities = 156/329 (48%), Positives = 206/329 (63%), Gaps = 18/329 (5%) Query 10 QAVADVVTSVLER---------DISWEALVCGGVTALPVPERLGGDGVGLFEVGALLTEV 60 + V VVT LER + +W AL G+ AL VPE GG+G+GL EV LL E Sbjct 16 EVVRSVVTEALERAGDDPTSTCERTWAALASAGLLALAVPEEQGGEGLGLREVAVLLRET 75 Query 61 GRHGAVTPALATLGLGVVPLLELASAEQQDRFLAGVAKG-GVLTAALNEPGAALPDRPAT 119 G H P TL G + L SAEQ+ L VA G +LT AL E GA +PDRPAT Sbjct 76 GVHAVQLPVWETLCCGALTLAAAGSAEQRHVLLPAVAAGEKLLTPALREVGAGIPDRPAT 135 Query 120 SFVGGRLSGTKVGVGYAEQADWMLVTADN----AVVVVSPTADGVRMVRTPTSNGSDEYV 175 ++ GR++G K+GV YA+++ +LVT AV +V P GVR++ +P+S + ++ Sbjct 136 TYADGRVTGRKIGVTYADRSARLLVTVTAGDRPAVALVDPQGPGVRLLESPSSLHTPQHT 195 Query 176 MTMDGVAVADCDILADV-AAHRVNQLALAVMGAYADGLVAGALRLTADYVANRKQFGKPL 234 + +DG A ++L AA +N+LA+A + A G+VAGA LTA Y+ R QFG+ L Sbjct 196 VVLDG---ASAELLEGADAACTLNELAVAGLCLTAAGVVAGARDLTASYLKGRTQFGRAL 252 Query 235 STFQTVAAQLAEVYIASRTIDLVAKSVIWRLAEDLDAGDDLGVLGYWVTSQAPPAMQICH 294 + FQ VA Q+A+VYIASRT+DL A++ WR+A DLDA DDL V YWV +AP AM+ CH Sbjct 253 AEFQAVAMQIADVYIASRTLDLAAQNAAWRIAHDLDATDDLAVAAYWVCREAPAAMRTCH 312 Query 295 HLHGGMGMDVTYPMHRYYSTIKDLTRLLG 323 HLHGGMG+DVTYPMHRY+S + DL LG Sbjct 313 HLHGGMGVDVTYPMHRYFSWVTDLAHALG 341 >gi|54022413|ref|YP_116655.1| putative acyl-CoA dehydrogenase [Nocardia farcinica IFM 10152] gi|54013921|dbj|BAD55291.1| putative acyl-CoA dehydrogenase [Nocardia farcinica IFM 10152] Length=354 Score = 254 bits (649), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 158/353 (45%), Positives = 216/353 (62%), Gaps = 17/353 (4%) Query 1 MDFDPTAEQQAVADVVTSVLERDIS-----WEALVCGGVTALPVPERLGGDGVGLFEVGA 55 MDF Q AVA+VV +LER+ + W +LV G+ L +PER GGDG+G E+ Sbjct 1 MDFTRDEGQDAVAEVVVGLLEREPARDMGLWPSLVETGLLGLALPERFGGDGMGQAEISV 60 Query 56 LLTEVGRHGAVTPALATLGLGVVPLLELASAEQQDRFLAGVAKGGVLTAALNEPGAALPD 115 LLTE+ PAL TLG G++PLL + + V KG VLTAAL+EPG Sbjct 61 LLTELATDAVAVPALPTLGFGLLPLLPVLPDAVAEVVYPEVGKGAVLTAALSEPGRPFTT 120 Query 116 RPATSFVGG----RLSGTKVGVGYAEQADWMLVTADNAVVVVSPTADGVRMVRTPTSNGS 171 P T+ V R+SG K+ V YAE+A W+L+ D + +V A+G+ +P S G Sbjct 121 SPKTTAVADGAVVRVSGHKIAVPYAEEARWLLIPTDAGIALVDGDAEGLTRTASPASGGL 180 Query 172 DEYVMTMDGVAVADCDILADVAAHRVNQLALAVMGAYADGLVAGALRLTADYVANRKQFG 231 E + + VA+ +L A +++ A++ +G+ ADGL+ GAL LTA+++ R+QFG Sbjct 181 PECTVRLADVAIPAERLLPGNLAD-LHRYAVSAIGSVADGLLKGALTLTAEHLRTRRQFG 239 Query 232 KPLSTFQTVAAQLAEVYIASRTIDLVAKSVIWRLA-EDLDAG------DDLGVLGYWVTS 284 +PL+ FQ VA ++A++Y+ SRT+ VA S W LA E+ DA DDL VL Y V + Sbjct 240 RPLAEFQAVAQEVADLYVVSRTLHAVAVSASWALAQEEGDADHRARVDDDLDVLAYTVAA 299 Query 285 QAPPAMQICHHLHGGMGMDVTYPMHRYYSTIKDLTRLLGGPSHRLELLGARCS 337 + P AMQ CHHLHGG+G+D+T+PMHRYYS KDL R LGG S RL+ LGARCS Sbjct 300 ELPAAMQKCHHLHGGLGVDITHPMHRYYSQAKDLARWLGGESLRLDRLGARCS 352 >gi|300784415|ref|YP_003764706.1| acyl-CoA dehydrogenase [Amycolatopsis mediterranei U32] gi|299793929|gb|ADJ44304.1| acyl-CoA dehydrogenase [Amycolatopsis mediterranei U32] gi|340525836|gb|AEK41041.1| acyl-CoA dehydrogenase [Amycolatopsis mediterranei S699] Length=362 Score = 249 bits (636), Expect = 5e-64, Method: Compositional matrix adjust. Identities = 149/303 (50%), Positives = 191/303 (64%), Gaps = 10/303 (3%) Query 45 GDGVGLFEVGALLTEVGRHGAVTPALATLGLGVVPLLELASAEQQDRFLAGVAKG-GVLT 103 GDG+G+ EV +LTEVGR A PA A L LGV+P+ L + Q+ +FL VA G +LT Sbjct 59 GDGLGVAEVAQVLTEVGRAAAPVPAYAALALGVLPIESLGTPAQRAQFLPPVAAGEALLT 118 Query 104 AALNEPGAALPDRPATSFVGGR----LSGTKVGVGYAEQADWMLVTAD----NAVVVVSP 155 AALNEP A L PA + G LSG K V YA +A +L +AV + P Sbjct 119 AALNEPSAPLVAEPAATARAGDGKWLLSGVKTAVPYAAEATRILTPVTTAHGSAVYLADP 178 Query 156 TADGVRMVRTPTSNGSDEYVMTMDGVAVADCDILADVAA-HRVNQLALAVMGAYADGLVA 214 ADGV +V TPTS G+ EY + +D VAV + D+L D A +++ ALA + DGL+A Sbjct 179 HADGVTLVPTPTSAGTPEYTVRLDDVAVEETDLLFDRGAVAALHRFALAGALTFGDGLLA 238 Query 215 GALRLTADYVANRKQFGKPLSTFQTVAAQLAEVYIASRTIDLVAKSVIWRLAEDLDAGDD 274 GAL LT +V R QFG+PLS FQ VA Q+A+VY+A+RT+ L +WRLA LDA + Sbjct 239 GALALTVKHVGERTQFGRPLSAFQAVAGQIADVYVAARTVHLAVTFAVWRLASGLDADAE 298 Query 275 LGVLGYWVTSQAPPAMQICHHLHGGMGMDVTYPMHRYYSTIKDLTRLLGGPSHRLELLGA 334 L V YW S+AP A+ CHHLHGG+G+D TYP+HRY S +KDL R LGG +HRL LG Sbjct 299 LDVAAYWFASRAPEALATCHHLHGGVGVDETYPLHRYSSAVKDLGRTLGGAAHRLGRLGE 358 Query 335 RCS 337 R + Sbjct 359 RVA 361 >gi|343925843|ref|ZP_08765358.1| putative acyl-CoA dehydrogenase [Gordonia alkanivorans NBRC 16433] gi|343764194|dbj|GAA12284.1| putative acyl-CoA dehydrogenase [Gordonia alkanivorans NBRC 16433] Length=374 Score = 248 bits (634), Expect = 7e-64, Method: Compositional matrix adjust. Identities = 149/310 (49%), Positives = 200/310 (65%), Gaps = 4/310 (1%) Query 25 SWEALVCGGVTALPVPERLGGDGVGLFEVGALLTEVGRHGAVTPALATLGLGVVPLLELA 84 +W+ALV G+ ALP+P GD V + L +GR AVTPAL TL +V E A Sbjct 52 TWQALVDAGLLALPLPADRDGDDVDEAGLLPLFRRMGRAAAVTPALGTLTAALV-FAEAA 110 Query 85 S--AEQQDRFLAGVAKGGVLTAALNEPGAALPDRPATSFVGGRLSGTKVGVGYAEQADWM 142 A+ R+ + G A+ E G L P TS GGRL+GTKVGV +AE A + Sbjct 111 GNGADVWSRWGESLTAGRWAAIAIGEHGDPLTPTPQTSVRGGRLNGTKVGVLHAEGASVL 170 Query 143 LVTADNAVVVVSPTADGVRMVRTPTSNGSDEYVMTMDGVAVADCDILADVAAHRVNQLAL 202 LVT+D VV +SPTADGV + RTP+S+G EY +T D VAV D D+++ + ++ L Sbjct 171 LVTSDAGVVAISPTADGVTLTRTPSSSGWGEYTVTFDDVAVDDADVVSRELSVLRDRYRL 230 Query 203 AVMGAYADGLVAGALRLTADYVANRKQFGKPLSTFQTVAAQLAEVYIASRTIDLVAKSVI 262 A+ AYADGLVAGA RLTAD+V+ R+QFGKP++ FQ V QLA++Y+ R++DL + Sbjct 231 ALC-AYADGLVAGATRLTADHVSTREQFGKPIALFQAVGQQLADIYVVGRSMDLSTTAAA 289 Query 263 WRLAEDLDAGDDLGVLGYWVTSQAPPAMQICHHLHGGMGMDVTYPMHRYYSTIKDLTRLL 322 WRL+E LDA DLGV YW+ + PP ++ HLHGG+G+D+TYP+HRY+S KDL RL+ Sbjct 290 WRLSEGLDAATDLGVAAYWLAEEIPPTLRAMTHLHGGIGVDITYPLHRYFSVAKDLARLV 349 Query 323 GGPSHRLELL 332 GG + RL+ L Sbjct 350 GGAAVRLDEL 359 >gi|319948638|ref|ZP_08022762.1| acyl-CoA dehydrogenase domain protein [Dietzia cinnamea P4] gi|319437719|gb|EFV92715.1| acyl-CoA dehydrogenase domain protein [Dietzia cinnamea P4] Length=783 Score = 245 bits (625), Expect = 8e-63, Method: Compositional matrix adjust. Identities = 148/323 (46%), Positives = 200/323 (62%), Gaps = 14/323 (4%) Query 26 WEALVCGGVTALPVPERLGGDGVGLFEVGALLTEVGRHGAVTPALATLGLGVVPLLELAS 85 W A G+ +L +P LGGD + ++ +L EVGR G V PAL TLGLGV+P++ L + Sbjct 48 WSAFATSGLLSLGLPSALGGDDLTPADIAVVLEEVGRAGVVIPALETLGLGVLPIVTLGT 107 Query 86 AEQQDRFLAGVAKGGVLTAALNEPGAALPDRPATSFVGGRLSGTKVGVGYAEQADWMLVT 145 A+QQ+R L+G+ G +LTAA+ EPG LP P GG L+GT V YA QA +LV Sbjct 108 ADQQERLLSGIEDGRILTAAVAEPGNPLPLEPTVRLDGGTLTGTVTSVRYAAQARAILVP 167 Query 146 ADN----AVVVVSPTADGVRMVRTPTSNGSDEYVMTMDGVAVADCDIL-----ADVAAHR 196 A +VVV+P A GV + T S G EY M +DGV V D D + ++ Sbjct 168 ASTPEGAVLVVVAPDAPGVTLTPTLGSLGVPEYAMRLDGVQVDDDDDVLRGSGSESVLEE 227 Query 197 VNQLALAVMGAYADGLVAGALRLTADYVANRKQFGKPLSTFQTVAAQLAEVYIASRTIDL 256 +L LA A+ DGLVAGAL +TA Y+ R QFGKPL +FQ V +LA+VYI S+T+ + Sbjct 228 FRRLVLAACIAHGDGLVAGALEMTAGYLKERVQFGKPLGSFQAVQQELADVYIVSQTLHV 287 Query 257 VAKSVIWRLAEDL-DAGD----DLGVLGYWVTSQAPPAMQICHHLHGGMGMDVTYPMHRY 311 +A+SV WR++E L GD D + YW+ ++ P A+Q+ HHLHGG+G+DVTYPM +Y Sbjct 288 IAQSVAWRISEGLAGPGDRYETDPTIGAYWLATEGPRAVQLLHHLHGGVGVDVTYPMFKY 347 Query 312 YSTIKDLTRLLGGPSHRLELLGA 334 S +KDL R +GG L+ LGA Sbjct 348 SSAVKDLARFVGGAQLHLDALGA 370 >gi|326384608|ref|ZP_08206287.1| acyl-CoA dehydrogenase domain-containing protein [Gordonia neofelifaecis NRRL B-59395] gi|326196742|gb|EGD53937.1| acyl-CoA dehydrogenase domain-containing protein [Gordonia neofelifaecis NRRL B-59395] Length=363 Score = 240 bits (612), Expect = 3e-61, Method: Compositional matrix adjust. Identities = 147/358 (42%), Positives = 206/358 (58%), Gaps = 36/358 (10%) Query 1 MDFDPTAEQQAVADVVTSVLER-----------------DISWEALVCGGVTALPVPERL 43 MDF AV DV V+ R +W+A+ GVT LP+PE L Sbjct 1 MDFSLEPTAAAVGDVADEVMRRLQPDWESKFTLDDGGFDHAAWKAMAGAGVTVLPLPESL 60 Query 44 GGDGVGLFEVGALLTEVGRHGAVTPALATLGLGVVPLLELASAEQQDRFLAGVAKGGVLT 103 GGD + + + L+T G V P + TL G++ L + +A R G+A+GG Sbjct 61 GGDSLPIDALVPLVTRAGHDAVVAPLIGTLVSGLL-LAQAPAAVVHGR---GIAEGGWHA 116 Query 104 AALNEPGAALPDRPATSFV----GGRLSGTKVGVGYAEQADWMLVTADNAVVVVSPTADG 159 A+ EP AL + A + G RL G K GV A+ A ++V AD V +V+P A G Sbjct 117 VAIGEPHRALGETLAVTLTPAANGARLDGVKTGVLAADGAAGLVVVADAGVAIVAPDAPG 176 Query 160 VRMVRTPTSNGSDEYVMTMDGVAVADCDILAD-----VAAHRVNQLALAVMGAYADGLVA 214 V + RTP+S+G EY + DGV V+ DIL+D V A+R A++ A+ADGLVA Sbjct 177 VTVTRTPSSSGWGEYTVVFDGVTVSASDILSDDPRAAVDAYR------ALLAAFADGLVA 230 Query 215 GALRLTADYVANRKQFGKPLSTFQTVAAQLAEVYIASRTIDLVAKSVIWRLAEDLDAGDD 274 GA++ TA++V+ R QFGKP++ FQ V QLA+VY+ SRT++LVA + W LA LDA D Sbjct 231 GAIKRTAEHVSTRHQFGKPIAAFQAVGQQLADVYVVSRTMNLVATAAAWNLASGLDAEAD 290 Query 275 LGVLGYWVTSQAPPAMQICHHLHGGMGMDVTYPMHRYYSTIKDLTRLLGGPSHRLELL 332 L YWV+++ P ++ HLHGG+G+DVTYP+HRY+S +KD+ RL GG L++L Sbjct 291 LATAMYWVSAELPATLRTMTHLHGGVGVDVTYPLHRYFSLVKDVARLAGGAHATLDVL 348 >gi|262200881|ref|YP_003272089.1| acyl-CoA dehydrogenase domain-containing protein [Gordonia bronchialis DSM 43247] gi|262084228|gb|ACY20196.1| acyl-CoA dehydrogenase domain protein [Gordonia bronchialis DSM 43247] Length=371 Score = 237 bits (605), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 142/308 (47%), Positives = 188/308 (62%), Gaps = 5/308 (1%) Query 26 WEALVCGGVTALPVPERLGGDGVGLFEVGALLTEVGRHGAVTPALATLGLGVVPLLELAS 85 W ALV G+ ALP+P GD VG+ + LL +G AVTPAL TL +V A Sbjct 46 WRALVDAGLLALPLPAEFDGDDVGVLGLLPLLRRMGESAAVTPALGTLTAALV--FAAAD 103 Query 86 AEQQDRFLAGVAKGGVLTAALNEPGAALPDRPATSFVGGRLSGTKVGVGYAEQADWMLVT 145 R+ + G AL EPG AL P T+ GGR SGTKVGV +A+ A +LV Sbjct 104 TNPWQRWPEALIGGRWAAIALGEPGDALTATPHTTVRGGRCSGTKVGVLHADGASVLLVG 163 Query 146 ADNAVVVVSPTADGVRMVRTPTSNGSDEYVMTMDGVAVADCDILA-DVAAHRVNQLALAV 204 D V V+S ADGV + T +S+G E + D VA+ D DI+ D++ R ++ LA+ Sbjct 164 TDAGVAVISADADGVSITPTTSSSGWGESTVVFDDVALDDADIVTRDLSVLR-DRYRLAL 222 Query 205 MGAYADGLVAGALRLTADYVANRKQFGKPLSTFQTVAAQLAEVYIASRTIDLVAKSVIWR 264 AYADGL+AGA RLTAD+V+ R+QFGKP++ FQ V QLA++Y+ R++DL S WR Sbjct 223 C-AYADGLIAGATRLTADHVSTREQFGKPIALFQAVGQQLADIYVIGRSLDLAVTSAGWR 281 Query 265 LAEDLDAGDDLGVLGYWVTSQAPPAMQICHHLHGGMGMDVTYPMHRYYSTIKDLTRLLGG 324 L E L A DDL + YW+ + P M+ HLHGG+G+D+TYP+HRY+S KDL RL GG Sbjct 282 LNEGLSAADDLAIGMYWIADEVPATMRTMTHLHGGVGVDITYPLHRYFSIAKDLARLAGG 341 Query 325 PSHRLELL 332 + RL+ L Sbjct 342 ATQRLDEL 349 >gi|333918576|ref|YP_004492157.1| putative acyl-CoA dehydrogenase FadE [Amycolicicoccus subflavus DQS3-9A1] gi|333480797|gb|AEF39357.1| putative acyl-CoA dehydrogenase FadE [Amycolicicoccus subflavus DQS3-9A1] Length=351 Score = 236 bits (601), Expect = 5e-60, Method: Compositional matrix adjust. Identities = 150/357 (43%), Positives = 209/357 (59%), Gaps = 31/357 (8%) Query 1 MDFDPTAEQQAVADVVTSVLER---------------DISWEALVCGGVTALPVPERLGG 45 MDFD Q+ + + +VL++ D W +L G+ +L +P LGG Sbjct 1 MDFDLDDIQRDILGLTEAVLQKAHGEGIAPAEAGDFDDALWASLAKSGLLSLAMPTDLGG 60 Query 46 DGVGLFEVGALLTEVGRHGAVTPALATLGLGVVPLLELASAEQQDRFLAGVAKGG-VLTA 104 DG+G+ E+ +L+ VG+ GA PAL+TL +GV+PL + EQ+ L VA G VLTA Sbjct 61 DGLGIAELSVVLSAVGKSGARVPALSTLAMGVLPLCAFGTREQKAEILPDVAAGNAVLTA 120 Query 105 ALNEPGAALPDRPATSFVGGRLSGTKVGVGYAEQADWMLVTAD----NAVVVVSPTADGV 160 L PGA AT L+G V YA+QA +LV A + V +V P GV Sbjct 121 EL--PGAL--SVHATREDQWLLNGRTAAVLYAQQARRVLVPAQVGERSGVFLVDPHGTGV 176 Query 161 RMVRTPTSNGSDEYVMTMDGVAVADCDIL-ADVAAHRVNQLALA-VMGAYADGL--VAGA 216 + R P+S+G+ EY+M A ++L ADV+ V L A +GA A G +AGA Sbjct 177 SLHRVPSSSGAPEYIMRF---VNATAEVLGADVSTDAVEWLRGAGTLGAVAVGCGALAGA 233 Query 217 LRLTADYVANRKQFGKPLSTFQTVAAQLAEVYIASRTIDLVAKSVIWRLAEDLDAGDDLG 276 L LT ++ R QFGKPL+TFQ VA Q+A+VYIA+RT DL K+ WRLA L A DDL Sbjct 234 LELTTHHIGTRAQFGKPLATFQAVAQQIADVYIAARTADLALKAATWRLASGLAADDDLT 293 Query 277 VLGYWVTSQAPPAMQICHHLHGGMGMDVTYPMHRYYSTIKDLTRLLGGPSHRLELLG 333 + YW+ ++ PA++ CHHLHGG+G+D++YP+HR+YS +KD+ R+LGG + E LG Sbjct 294 IAAYWLIAEGLPALRTCHHLHGGVGVDMSYPLHRHYSVLKDVARMLGGAEQQRERLG 350 >gi|145595204|ref|YP_001159501.1| acyl-CoA dehydrogenase domain-containing protein [Salinispora tropica CNB-440] gi|145304541|gb|ABP55123.1| acyl-CoA dehydrogenase domain protein [Salinispora tropica CNB-440] Length=339 Score = 225 bits (574), Expect = 7e-57, Method: Compositional matrix adjust. Identities = 142/343 (42%), Positives = 202/343 (59%), Gaps = 24/343 (6%) Query 2 DFDPTAEQQAVADVVTSVLER-----DISWEALVCGGVTALPVPERLGGDGVGLFEVGAL 56 +F+ QQ++ + VL + W+AL G+ L VPER GG G+G VG L Sbjct 4 NFELDDAQQSIVRLADEVLSDSDGTPERLWKALGQSGLLGLAVPERWGGAGLGAMAVGVL 63 Query 57 LTEVGRHGAVTPALATLGLGVVPLLELASAEQQDRFLAGVAKGGVLTAALNEPGAALPDR 116 LTE+GR A PA +TL LGV+P+ + S QQ L+GV +G VLTAAL P Sbjct 64 LTEIGRRAARVPAWSTLSLGVLPVARVGSPAQQRELLSGVLEGRVLTAALGAP------L 117 Query 117 PATSFVGGRLSGTKVGVGYAEQADWMLVT-----ADNAVVVVSPTADGVRMVRTPTSNGS 171 P T G R++G+ V A+ A +LV VV++ P A GV ++RTPTS G+ Sbjct 118 PVTD--GWRITGSCGPVPDADAAYRVLVPVRVRGGGPTVVLIDPAAPGVTLLRTPTSAGT 175 Query 172 DEYVMTMDGVAVADCDILADVAAHRVNQLALAVMGAYADGLVAGALRLTADYVANRKQFG 231 DE+ + ++G A + L D A + + A+A A DG +AGALR+TA++V +R+QF Sbjct 176 DEFTVRLEGAA---AEPLGD-AEVDLRRFAVAGACALGDGALAGALRMTAEHVRDRQQFA 231 Query 232 KPLSTFQTVAAQLAEVYIASRTIDLVAKSVIWRLAEDLDAGDDLGVLGYWVTSQAPPAMQ 291 +PL+TFQ VA Q+A VY+A+RT+ + A + W DA DL YW++S A PA++ Sbjct 232 RPLATFQAVAQQIANVYVAARTMHVAALAASWSAEMGQDA--DLWTAAYWLSSTALPALR 289 Query 292 ICHHLHGGMGMDVTYPMHRYYSTIKDLTRLLGGPSHRLELLGA 334 CHHLHGG+G+ YP+HR+ + ++DL R LGG + L LGA Sbjct 290 TCHHLHGGLGLAADYPLHRHTALVRDLVRHLGGTEYCLHQLGA 332 >gi|302525650|ref|ZP_07277992.1| acyl-CoA dehydrogenase domain-containing protein [Streptomyces sp. AA4] gi|302434545|gb|EFL06361.1| acyl-CoA dehydrogenase domain-containing protein [Streptomyces sp. AA4] Length=355 Score = 221 bits (563), Expect = 1e-55, Method: Compositional matrix adjust. Identities = 163/354 (47%), Positives = 210/354 (60%), Gaps = 17/354 (4%) Query 1 MDFDPTAEQQAVADVVTSVL----ERDISWEALVCGGVTALPVPERLGGDGVGLFEVGAL 56 MDF P Q + + VL E W AL G+ ALP+P LGGDG+G+ V + Sbjct 1 MDFTPDDTQGEITSLAAQVLGKADEPADQWRALADAGLLALPLPADLGGDGLGVDHVAPV 60 Query 57 LTEVGRHGAVTPALATLGLGVVPLLELASAEQQDRFLAGVAKG-GVLTAALNEPGAALPD 115 LTEVGR A PA A L LG++P+ L + Q+ FL A G +LTAAL+EP A L Sbjct 61 LTEVGRAAAAVPAYAVLALGLLPIEALGTPAQRAEFLPPAAAGETILTAALHEPSAPLTA 120 Query 116 RPATSFVGG----RLSGTKVGVGYAEQADWML----VTADNAVVVVSPTADGVRMVRTPT 167 P TS ++G K V YA +A +L + V +V P ADGV ++ Sbjct 121 LPGTSGAAADGAWSVTGVKTHVPYAAEATRILTPIALPGGTGVALVDPQADGVEVLPAYN 180 Query 168 SNGSDEYVMTMDGVAVADCDILAD-VAAHRVNQL---ALAVMGAYADGLVAGALRLTADY 223 + G+ EY + DG V++ D L D A H V L ALA A DGL+AGAL LTA + Sbjct 181 ATGTPEYTVRFDGARVSEADFLRDRTAGHAVQTLHRYALAGALALGDGLLAGALALTAQH 240 Query 224 VANRKQFGKPLSTFQTVAAQLAEVYIASRTIDLVAKSVIWRLAEDLDAGDDLGVLGYWVT 283 V R QFG+PL+TFQ VA Q+A+VY+ASRT+ L A S +WRLA LDA +L + YW+T Sbjct 241 VGERTQFGRPLATFQAVAQQIADVYVASRTVHLAAVSAVWRLASGLDADTELDIAAYWLT 300 Query 284 SQAPPAMQICHHLHGGMGMDVTYPMHRYYSTIKDLTRLLGGPSHRLELLGARCS 337 +AP A+ ICHHLHGG+G+D TYP+HRY S IKDL R +GG +HRL LG R + Sbjct 301 EEAPSALAICHHLHGGVGVDRTYPLHRYSSAIKDLGRAVGGAAHRLGRLGERVA 354 >gi|296141526|ref|YP_003648769.1| acyl-CoA dehydrogenase domain-containing protein [Tsukamurella paurometabola DSM 20162] gi|296029660|gb|ADG80430.1| acyl-CoA dehydrogenase domain protein [Tsukamurella paurometabola DSM 20162] Length=751 Score = 211 bits (537), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 141/352 (41%), Positives = 194/352 (56%), Gaps = 20/352 (5%) Query 1 MDFDPTAEQQAVADVVTSVLERDI-------SWEALVCGGVTALPVPERLGGDGVGLFEV 53 MDF P Q AVA + VL R +W L + L PE +GG G+G E+ Sbjct 1 MDFHPDENQAAVAGLAADVLTRSTEQGDWRATWTDLARADLLGLHAPESVGGAGLGAEEM 60 Query 54 GALLTEVGRHGAVTPALATLGLGVVPLLELASAEQQDRFLAGVAKG-GVLTAALNEPGAA 112 A+LTE GR P L L LG+ P+ + EQQ R L G ++ ALNE GAA Sbjct 61 TAVLTEAGRLHCTAPLLPALALGIAPVAAHGTTEQQQRLLPAALSGEQLIVGALNEAGAA 120 Query 113 LPDRPAT----SFVGGRLSGTKVGVGYAEQADWMLVTADN----AVVVVSPTADGVRMVR 164 LP P T + G L+G KV VGYA+ A +LV+A A+ VV A G+ ++ Sbjct 121 LPRHPRTRAERTADGWSLTGRKVAVGYAQHAAHLLVSASTDAGAAIFVVDSGAPGLTVLP 180 Query 165 TPTSNGSDEYVMTMDGVAVADCDILAD----VAAHRVNQLALAVMGAYADGLVAGALRLT 220 +P+S+ + E + +D V + +L A V + L A ADG +AGAL LT Sbjct 181 SPSSSAAPEATVVLDAVELPPDAVLGSGVDGTVARSVREYGLVGAAALADGALAGALALT 240 Query 221 ADYVANRKQFGKPLSTFQTVAAQLAEVYIASRTIDLVAKSVIWRLAEDLDAGDDLGVLGY 280 D++ R+QFG+PL+ FQ VA Q+A+VYIASRT+ L A S WR+ A + + Y Sbjct 241 VDHLRKREQFGRPLAAFQAVAQQIADVYIASRTLHLAATSAAWRVGTGSAADEATALAAY 300 Query 281 WVTSQAPPAMQICHHLHGGMGMDVTYPMHRYYSTIKDLTRLLGGPSHRLELL 332 W+ ++AP A + CHHLHGG+G+D TYP+HR+ S +KDL R +GG + L L Sbjct 301 WLAAEAPSAARTCHHLHGGIGVDATYPLHRFSSALKDLVRFVGGATATLRDL 352 >gi|159038451|ref|YP_001537704.1| acyl-CoA dehydrogenase domain-containing protein [Salinispora arenicola CNS-205] gi|157917286|gb|ABV98713.1| acyl-CoA dehydrogenase domain protein [Salinispora arenicola CNS-205] Length=339 Score = 210 bits (534), Expect = 3e-52, Method: Compositional matrix adjust. Identities = 141/343 (42%), Positives = 200/343 (59%), Gaps = 24/343 (6%) Query 2 DFDPTAEQQAVADVVTSVLER-----DISWEALVCGGVTALPVPERLGGDGVGLFEVGAL 56 +F+ Q+++ + VL + W+AL G+ L VP LGG G+G GAL Sbjct 4 NFEHDDAQKSIVSLAGEVLSDSEGTPERLWKALGQSGLLGLAVPAALGGAGLGAMATGAL 63 Query 57 LTEVGRHGAVTPALATLGLGVVPLLELASAEQQDRFLAGVAKGGVLTAALNEPGAALPDR 116 LTE+GRH A PA +TL LGV+P+ S +QQ L GV +G VLTAAL EP A D Sbjct 64 LTEIGRHAARIPAWSTLSLGVLPVARSGSTDQQRELLPGVLEGRVLTAALGEPLWATED- 122 Query 117 PATSFVGGRLSGTKVGVGYAEQADWMLVTAD-----NAVVVVSPTADGVRMVRTPTSNGS 171 R++GT V + A +LV V ++ PT ++RTPTS G+ Sbjct 123 -------WRITGTCGPVPDGDLAYRVLVPVRVRGGGPTVALIDPTTSNATLLRTPTSAGT 175 Query 172 DEYVMTMDGVAVADCDILADVAAHRVNQLALAVMGAYADGLVAGALRLTADYVANRKQFG 231 DE+++ ++ A + L D A + + A+A A DG +AGALR+TAD+V NR QFG Sbjct 176 DEFMLRLE---EAPAEPLGD-AEVDLRRFAVAGACALGDGALAGALRMTADHVRNRHQFG 231 Query 232 KPLSTFQTVAAQLAEVYIASRTIDLVAKSVIWRLAEDLDAGDDLGVLGYWVTSQAPPAMQ 291 +PL+TFQ VA Q+A+VY+ASRT+ + A + W DA DL + YW++S+A PA++ Sbjct 232 RPLATFQAVAQQMADVYVASRTMHVAALAACWSAEMGRDA--DLWIGAYWLSSEALPALR 289 Query 292 ICHHLHGGMGMDVTYPMHRYYSTIKDLTRLLGGPSHRLELLGA 334 CHHLHGG+G+ YP+HR+ + ++DL R LGG + L LGA Sbjct 290 TCHHLHGGLGLAADYPLHRHTALVRDLVRHLGGAEYCLRQLGA 332 >gi|311744301|ref|ZP_07718105.1| acyl-CoA dehydrogenase domain protein [Aeromicrobium marinum DSM 15272] gi|311312474|gb|EFQ82387.1| acyl-CoA dehydrogenase domain protein [Aeromicrobium marinum DSM 15272] Length=733 Score = 207 bits (526), Expect = 2e-51, Method: Compositional matrix adjust. Identities = 135/319 (43%), Positives = 181/319 (57%), Gaps = 10/319 (3%) Query 12 VADVVTSVLERDISWEALVCGGVTALPVPERLGGDGVGLFEVGALLTEVGRHGAVTPALA 71 V +V+ VL+RD W L G+ AL P GG+ +G+ EV ALL EVGR + P Sbjct 17 VREVIGHVLDRDEGWPGLQQAGLLALAAPASFGGEDLGMAEVAALLHEVGRRSSDLPVWE 76 Query 72 TLGLGVVPLLELASAEQQDRFLAGVAKGGVLTA-ALNEPGAALPDRPATSFVGGRLSGTK 130 T+ G++PL+ S + Q L V G + A AL E GAALP RP TS GG ++G+K Sbjct 77 TVACGLLPLVRSGSPDLQADLLPRVLAGDLTFAPALAEVGAALPTRPRTSLAGGGVTGSK 136 Query 131 VGVGYAEQADWMLVTA---DNAVV-VVSPTADGVRMVRTPTSNGSDEYVMTMDGVAVADC 186 VGV +LV+ D VV +V P GV T +S G+ E T Sbjct 137 VGVPVPTGPALLLVSVTGPDGPVVALVDPDGPGVSRTDTGSSRGAGEATYTF-----TSA 191 Query 187 DILADVAAHRVNQLALAVMGAYADGLVAGALRLTADYVANRKQFGKPLSTFQTVAAQLAE 246 ++ ++ A V + A+A + A G V GA LTA Y+ +R+QFG+ L+ FQ VA Q+A+ Sbjct 192 PVVGELDAEVVRRHAVAGLVALGAGAVEGARDLTAGYIRDRRQFGRALAEFQAVALQIAD 251 Query 247 VYIASRTIDLVAKSVIWRLAEDLDAGDDLGVLGYWVTSQAPPAMQICHHLHGGMGMDVTY 306 VY+ASRT L A V RL A DDL V +W +A PAMQ CHHLHGGMG+D+TY Sbjct 252 VYVASRTFTLTATEVARRLDAGDPAADDLAVAAHWFADRAGPAMQTCHHLHGGMGVDITY 311 Query 307 PMHRYYSTIKDLTRLLGGP 325 M Y+S ++D++R LGGP Sbjct 312 AMSGYFSLVRDISRHLGGP 330 >gi|326331720|ref|ZP_08198008.1| putative acyl-CoA dehydrogenase [Nocardioidaceae bacterium Broad-1] gi|325950519|gb|EGD42571.1| putative acyl-CoA dehydrogenase [Nocardioidaceae bacterium Broad-1] Length=726 Score = 201 bits (510), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 138/348 (40%), Positives = 192/348 (56%), Gaps = 25/348 (7%) Query 11 AVADVVTSVLERDIS---WEALVCGGVTALPVPERLGGDGVGLFEVGALLTEVGRHGAVT 67 AV VV VL R+ W A G+TALPVPE GG+G GL E+ LL E GRH Sbjct 8 AVRSVVAEVLARESDRGDWSAWASAGLTALPVPEAQGGEGFGLTEIAVLLREAGRHAVRV 67 Query 68 PALATLGLGVVPLLELASAEQQDRFLAGVAKG-GVLTAALNEPGAALPDRPATSFVGGRL 126 P TL +G + L ++EQ+ L+GVA G +LT A E G P+ P+ ++ G + Sbjct 68 PVWETLAVGALTLAGHGTSEQRGAILSGVANGETLLTPAWLETGR--PETPSATYRDGIV 125 Query 127 SGTKVGVGYAEQADWMLVTADNA------VVVVSPTADGVRMVRTPTSNGSDEYVMTMDG 180 SG K GV YA ++ +LVTA A VV+V P+ GV + +S ++ + ++ Sbjct 126 SGRKTGVTYATESAHLLVTATAADSGAPVVVLVDPSGPGVTLAPASSSGELPQHTVVLED 185 Query 181 VAVADCDILADVAAHRVNQLALAVMGAYADGLVAGALRLTADYVANRKQFGKPLSTFQTV 240 A + L A + LA A + A G++AGA LTA YV+NR+QFG+ L+ FQ V Sbjct 186 ---APAEPLGAGAFETLTGLATAGLAVSAAGVLAGARDLTAAYVSNRQQFGRALAEFQAV 242 Query 241 AAQLAEVYIASRTIDLVAKSVIWRLAEDLDAGDDLGVLGYWVTSQAPPAMQICHHLHGGM 300 A Q+A+VY+ SRT+DL A + + +A+ G DL V YW + AP A + CHHLHGGM Sbjct 243 ALQMADVYVTSRTLDLAADNAVAAVAQGRAPGTDLKVAAYWASQVAPYAFRTCHHLHGGM 302 Query 301 GMDVTYPMHRYYSTIKDLTRLLGGP----------SHRLELLGARCSL 338 G+DVTYP+ + + D+ LL P + LEL A+ SL Sbjct 303 GVDVTYPLLGFTTWGTDIAHLLDTPADAVPVETDEAKNLELTEAQRSL 350 >gi|269127846|ref|YP_003301216.1| acyl-CoA dehydrogenase domain-containing protein [Thermomonospora curvata DSM 43183] gi|268312804|gb|ACY99178.1| acyl-CoA dehydrogenase domain protein [Thermomonospora curvata DSM 43183] Length=368 Score = 177 bits (448), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 133/367 (37%), Positives = 185/367 (51%), Gaps = 40/367 (10%) Query 1 MDFDPTAEQQAVADVVTSVLERDIS------------------WEALVCGGVTALPVPER 42 MDF+ Q+ + D+ +L R+ S W+A+ G+ +PE Sbjct 1 MDFNLDPTQRELRDLAADLLGREASTARLDAHDAGDAPFEAGIWKAMGQAGLLGACLPEE 60 Query 43 LGGDGVGLFEVGALLTEVGRHGAVTPALATLGLGVVPLLELASAEQQDRFLAGVAKGGVL 102 GG G G E+ +L EVG H A PA A+L L VP+ + +Q+ VL Sbjct 61 TGGAGQGPVEMAVILREVGAHVAPVPAYASLALAAVPIAAHGTPDQRALLSRLADAETVL 120 Query 103 TAALNEPG-----AALPDRPATSFVGGRLSGTKVGVGYAEQADWMLVTA-----DNAVVV 152 T A E G A R +V L G K V YAEQA +LV A D V + Sbjct 121 TGAWREAGPIGQVTATARRDGDGYV---LEGVKTFVPYAEQAACILVPARVDGADVGVFL 177 Query 153 VSPTADGVRMVRTPTSNGSDEYVMTMDGVAVADCDIL---ADVAAHRVNQLALAVMGAYA 209 V P A V + R P + G + + GV V +L AD AA R Q + A+ GA A Sbjct 178 VEPGA--VELSRHPAATGEPMSRLALGGVRVGSDALLGGTADGAAWRTLQSS-AIAGAVA 234 Query 210 --DGLVAGALRLTADYVANRKQFGKPLSTFQTVAAQLAEVYIASRTIDLVAKSVIWRLAE 267 G++AGAL++T DYV R+QFG+ L+ FQ V Q+A+VYIA+R +D+ + +WRLA Sbjct 235 TVSGVIAGALKITTDYVKTREQFGRALAQFQAVTMQVADVYIAARALDVAMWAGVWRLAA 294 Query 268 DL-DAGDDLGVLGYWVTSQAPPAMQICHHLHGGMGMDVTYPMHRYYSTIKDLTRLLGGPS 326 L DA + L V Y A+ C HLHGG+G+D+TYP+HRY++ K LLGG Sbjct 295 GLPDAEEILSVAAYNACDPVLKALYTCQHLHGGIGLDITYPLHRYFAWGKHYAHLLGGAE 354 Query 327 HRLELLG 333 +L+ +G Sbjct 355 AQLDAIG 361 >gi|271969395|ref|YP_003343591.1| acyl-CoA dehydrogenase domain-containing protein [Streptosporangium roseum DSM 43021] gi|270512570|gb|ACZ90848.1| acyl-CoA dehydrogenase domain-containing protein [Streptosporangium roseum DSM 43021] Length=361 Score = 167 bits (422), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 133/368 (37%), Positives = 187/368 (51%), Gaps = 43/368 (11%) Query 1 MDFDPTAEQQAVADVVTSVLERDIS------------------WEALVCGGVTALPVPER 42 MDF+ Q + D+ +L R+++ W +L G+ +PE Sbjct 1 MDFNLDETQSDLRDLAAELLGREVTSSRLEAHEASGAPYDAKLWRSLAQAGLLGACLPEE 60 Query 43 LGGDGVGLFEVGALLTEVGRHGAVTPALATLGLGVVPLLELASAEQQDRFLAGVAKGG-V 101 GG G+G + +L E+G H A P +L + + + S EQ++ LA +A+GG V Sbjct 61 AGGAGLGPVGLAVVLREIGAHVAPVPVQQSL-VTALAIARYGSREQRE-ALAPLAEGGLV 118 Query 102 LTAALNEPG---AALPDRPATSFVGGR-LSGTKVGVGYAEQADWMLV--TADNAV--VVV 153 L +AL EPG A P A GG L G K V YA Q +LV T D V +V Sbjct 119 LASALREPGRDLGAAPTATAREEGGGWVLHGRKSTVSYAAQTSKVLVPATTDEGVGLFLV 178 Query 154 SPTADGVRMVRTPTSNGSDEYVMTMDG-----VAVADCDILADVAAHRVNQLALAVMGAY 208 +P A VR + S G +T+DG V D + A + +LALA + A Sbjct 179 APEAMTVRAEQV--STGEPAATLTLDGAPGEPVGARDGEAFAGL-----RRLALAGIVAV 231 Query 209 ADGLVAGALRLTADYVANRKQFGKPLSTFQTVAAQLAEVYIASRTIDLVAKSVIWRLAED 268 + G++AGAL LT +Y+ R+QF + L+ FQ V Q+A+VYIA R +D+ S WRLAE Sbjct 232 SSGVLAGALALTTEYIRTRRQFDRALAEFQAVTVQIADVYIAGRALDVAVWSGAWRLAEG 291 Query 269 L--DAGDDLGVLGYWVTSQAPPAMQICHHLHGGMGMDVTYPMHRYYSTIKDLTRLLGGPS 326 +A DL V VT A+ C HLHGG+G+DVTYP+HRY++ K LLGG Sbjct 292 SAEEAETDLAVAALTVTDPVLKALYTCQHLHGGIGLDVTYPLHRYFAWGKHHAHLLGGVE 351 Query 327 HRLELLGA 334 RL+ +GA Sbjct 352 ARLDTIGA 359 >gi|296170096|ref|ZP_06851696.1| acyl-CoA dehydrogenase domain protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295895238|gb|EFG74950.1| acyl-CoA dehydrogenase domain protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length=389 Score = 164 bits (416), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 122/371 (33%), Positives = 177/371 (48%), Gaps = 32/371 (8%) Query 1 MDFDPTAEQQAVADVVTSVLER------------------DISWEALVCGGVTALPVPER 42 MDF T EQ+ ++ + + E D W L + +PE Sbjct 1 MDFAFTEEQETISKLARDLFEHRATPERLTELEAGDVRFDDALWRELAAADLLGTALPEP 60 Query 43 LGGDGVGLFEVGALLTEVGRHGAVTPALATLGLGVVPLLELASAEQQDRFLAGVAKGG-V 101 +GG+G G E+G LL EVGR A PA ATL LG P+ + EQ+ RFL GVA G + Sbjct 61 VGGNGGGFVELGVLLAEVGRAVAPVPAYATLALGADPIARHGNDEQRQRFLPGVATGDRI 120 Query 102 LTAALNEPGAALPDRPATSFV--GG--RLSGTKVGVGYAEQADWMLVTA-----DNAVVV 152 LTA L EPG + PAT+ GG RL G K V A+ AD +L+ A + + + Sbjct 121 LTAGLAEPGRSGLTAPATTARRDGGQWRLDGAKELVPAAQLADTVLIPASMEDGEVGLFL 180 Query 153 VSPTADGVRMVRTPTSNGSDEYVMTMDGVAVADCD-ILADVAAHRVNQLALAVMGAYADG 211 ++ A GV + T+N + +DG AV+D D ++ A ++ AL + A G Sbjct 181 LAADARGVEIRPAATTNREPHADVYLDGAAVSDADRLIGPDLAESLHTRALVALCAVQLG 240 Query 212 LVAGALRLTADYVANRKQFGKPLSTFQTVAAQLAEVYIASRTIDLVAKSVIWRLAED--- 268 + ALR+ A+Y R+QFG+P+ +FQ V ++A+ YI I W +A Sbjct 241 VAERALRIAAEYTTGREQFGRPIGSFQAVQQRMADAYIDVEAIRWTTWHAAWLIAHGRPL 300 Query 269 LDAGDDLGVLGYWVTSQAPPAMQICHHLHGGMGMDVTYPMHRYYSTIKDLTRLLGGPSHR 328 +AG + +W H+HGG+G+D TYP+HRY+ K LG + + Sbjct 301 TEAGRAARIAKFWAAEAGARVAATAQHVHGGIGIDTTYPLHRYFLWAKHNELTLGPATVQ 360 Query 329 LELLGARCSLT 339 L LGA T Sbjct 361 LAQLGATYGAT 371 >gi|229494541|ref|ZP_04388304.1| acyl-CoA dehydrogenase [Rhodococcus erythropolis SK121] gi|229318903|gb|EEN84761.1| acyl-CoA dehydrogenase [Rhodococcus erythropolis SK121] Length=373 Score = 161 bits (407), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 120/366 (33%), Positives = 179/366 (49%), Gaps = 34/366 (9%) Query 1 MDFDPTAEQQ--------AVADVVTSVLERDIS----------WEALVCGGVTALPVPER 42 M+F T QQ VA++VT+ R++ W AL GV +PE Sbjct 1 MEFTLTEAQQDLSGLTRSVVAELVTNDRLRELDAAEDRFDALLWNALASAGVLGAALPES 60 Query 43 LGGDGVGLFEVGALLTEVGRHGAVTPALATLGLGVVPLLELASAEQQDRFLAGVAKG-GV 101 +GGDG G+ E ++L E+GR A P L ++ + E S +Q+D + + A G V Sbjct 61 VGGDGFGVLEQCSILAELGRGVAAVPFLTSIVGSAAAIAEFGSDQQRDEWASAAAAGEKV 120 Query 102 LTAALNEPGAALPDRPAT----SFVGGRLSGTKVGVGYAEQADWMLVTADN----AVVVV 153 LTAAL E P P T + G R+ G K+ V A AD LV A AV +V Sbjct 121 LTAALTEEYNDDPAHPVTRAEKTAEGWRIDGAKITVDSAPLADLFLVPAITEDGVAVFLV 180 Query 154 SPTADGVRMVRTPTSNGSDEYVMTMDGVAVADCDIL------ADVAAHRVNQLALAVMGA 207 P+ GV + R T++ S ++ D V + +L +D+AA V ++ L A Sbjct 181 EPSDAGVSITRQSTTDFSSAGLVEFDSVQIPADRVLGSVAQGSDIAAWIVERIQLGST-A 239 Query 208 YADGLVAGALRLTADYVANRKQFGKPLSTFQTVAAQLAEVYIASRTIDLVAKSVIWRLAE 267 Y G++ AL+LTA+Y R QFG+P+ +FQ VA +LA+ YI + + L + WRL+E Sbjct 240 YQYGVLDQALKLTAEYATERVQFGRPIGSFQAVAQRLADGYIDVKGVRLTLWAAAWRLSE 299 Query 268 DLDAGDDLGVLGYWVTSQAPPAMQICHHLHGGMGMDVTYPMHRYYSTIKDLTRLLGGPSH 327 L + + +W H+HGG+G+D +P+HRY+ K LLG + Sbjct 300 GLPSDGAVQTAKFWAADAGHRVGHTAVHVHGGVGLDEDHPVHRYFLAAKHHEFLLGNATD 359 Query 328 RLELLG 333 +L LG Sbjct 360 QLRALG 365 >gi|111021664|ref|YP_704636.1| acyl-CoA dehydrogenase [Rhodococcus jostii RHA1] gi|110821194|gb|ABG96478.1| acyl-CoA dehydrogenase [Rhodococcus jostii RHA1] Length=373 Score = 160 bits (404), Expect = 4e-37, Method: Compositional matrix adjust. Identities = 119/370 (33%), Positives = 184/370 (50%), Gaps = 34/370 (9%) Query 1 MDFDPTAEQQ--------AVADVVTSVLERDIS----------WEALVCGGVTALPVPER 42 MDF PT QQ V+D+VT+ R++ W AL GV + +PE Sbjct 1 MDFTPTEAQQDLAGLTKGIVSDLVTNDRLRELDDAEDRLDRRLWSALASSGVLSAALPES 60 Query 43 LGGDGVGLFEVGALLTEVGRHGAVTPALATLGLGVVPLLELASAEQQDRFLAGVAKG-GV 101 +GGDG G+ E ++L E+GR A P L+++ + + + + +Q+ + A G + Sbjct 61 VGGDGFGVLEQCSILVELGRAVAPVPYLSSIVMAAGAIAKYGTEQQRSDWGTPAACGEKI 120 Query 102 LTAALNEPGAALPDRPATSFV----GGRLSGTKVGVGYAEQADWMLVTADN----AVVVV 153 LT AL+E P P T G L GTK+ V A D LV A AV +V Sbjct 121 LTVALDEELNDNPGAPVTRAERGADGWTLDGTKIVVDAAPSGDLFLVPATTPDGVAVFLV 180 Query 154 SPTADGVRMVRTPTSNGSDEYVMTMDGVAVADCDIL------ADVAAHRVNQLALAVMGA 207 P GV + R T + + +T+ GV++A+ +L +++ A V + +L A Sbjct 181 RPDDAGVTVTRQQTVDLASTGEVTLHGVSLAEDRVLGAVDRGSEIVAWLVERGSLGAC-A 239 Query 208 YADGLVAGALRLTADYVANRKQFGKPLSTFQTVAAQLAEVYIASRTIDLVAKSVIWRLAE 267 Y G++ AL+LTA Y R QFG+P+ +FQ VA +LA+ YI + + L WRL+E Sbjct 240 YQYGVLDEALKLTAAYARERVQFGRPIGSFQAVAQRLADGYIDVKGVRLTLWQAAWRLSE 299 Query 268 DLDAGDDLGVLGYWVTSQAPPAMQICHHLHGGMGMDVTYPMHRYYSTIKDLTRLLGGPSH 327 DL + D+ +W + H+HGG+G+D +P+HRY+ K L LG + Sbjct 300 DLPSEGDIQTANFWASDAGHRVAHTLVHVHGGVGLDEDHPVHRYFLAAKALEFRLGSATQ 359 Query 328 RLELLGARCS 337 +L +LGA + Sbjct 360 QLRILGAELA 369 >gi|118463127|ref|YP_880581.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium avium 104] gi|118164414|gb|ABK65311.1| acyl-CoA dehydrogenase, C- domain protein [Mycobacterium avium 104] Length=373 Score = 158 bits (400), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 122/369 (34%), Positives = 172/369 (47%), Gaps = 32/369 (8%) Query 1 MDFDPTAEQQAVADVVTSVLERDISWEALV------------------CGGVTALPVPER 42 MDF T EQ+ + + + ER + E L + +PE Sbjct 1 MDFSFTEEQETIGKLARDLFERRATPERLTELEAGDTRHDAALWEELAAADLLGAALPEA 60 Query 43 LGGD---GVGLFEVGALLTEVGRHGAVTPALATLGLGVVPLLELASAEQQDRFLAGVAKG 99 +GG G G E+G LL EVG A PA ATL LG + S+EQQ R L GV G Sbjct 61 VGGSCASGGGFVELGVLLAEVGYGVAPVPAYATLVLGADSIARHGSSEQQQRVLPGVIAG 120 Query 100 G-VLTAALNEPGAALPDRPATSFV----GGRLSGTKVGVGYAEQADWMLVTA-----DNA 149 +LTA L EPG + P RPAT+ RL G K V A+ AD ML+ A D Sbjct 121 SRILTAGLAEPGRSDPARPATTARRDGPNWRLDGAKELVPAAQLADTMLIPAALDGGDVG 180 Query 150 VVVVSPTADGVRMVRTPTSNGSDEYVMTMDGVAVADCDILADVA-AHRVNQLALAVMGAY 208 + +++ A GV + PT+N + +DG V++ D +A + + AL + A Sbjct 181 LFLLAADAAGVEIRPVPTTNREPHADVFLDGARVSEADRIAGMGLVESLLTRALVALCAI 240 Query 209 ADGLVAGALRLTADYVANRKQFGKPLSTFQTVAAQLAEVYIASRTIDLVAKSVIWRLAED 268 G+V ALR+ A+Y R+QFG+P+ +FQ V ++A+ +I I W +A Sbjct 241 QLGVVERALRIAAEYTTGREQFGRPIGSFQAVQQRMADAFIDVEAIRWTTWQAAWLVAHG 300 Query 269 LDAGDDLGVLGYWVTSQAPPAMQICHHLHGGMGMDVTYPMHRYYSTIKDLTRLLGGPSHR 328 A + +W H+HGG+G+DVTYP+HRY+ K LG S + Sbjct 301 RPADRAARIAKFWAAEAGARVAATAQHVHGGIGIDVTYPLHRYFLWAKHNELTLGPASAQ 360 Query 329 LELLGARCS 337 L LGA S Sbjct 361 LAHLGATYS 369 >gi|226304443|ref|YP_002764401.1| acyl-CoA dehydrogenase [Rhodococcus erythropolis PR4] gi|226183558|dbj|BAH31662.1| putative acyl-CoA dehydrogenase [Rhodococcus erythropolis PR4] Length=373 Score = 157 bits (396), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 108/323 (34%), Positives = 163/323 (51%), Gaps = 16/323 (4%) Query 26 WEALVCGGVTALPVPERLGGDGVGLFEVGALLTEVGRHGAVTPALATLGLGVVPLLELAS 85 W AL GV +PE +GGDG G+ E ++L E+GR A P L ++ + E S Sbjct 44 WNALASAGVLGAALPESVGGDGFGVLEQCSILAELGRGVAAVPFLTSIVGSAAAIAEFGS 103 Query 86 AEQQDRFLAGVAKG-GVLTAAL----NEPGAALPDRPATSFVGGRLSGTKVGVGYAEQAD 140 +Q+D + + A G +LTAAL N+ A R + G R+ G K+ V A AD Sbjct 104 DKQRDDWASAAAAGEKILTAALAEEYNDDSAHPITRAEKTADGWRIDGAKITVDSAPLAD 163 Query 141 WMLVTADN----AVVVVSPTADGVRMVRTPTSNGSDEYVMTMDGVAVADCDIL------A 190 LV A AV +V P+ GV + R T++ S ++ D V + +L + Sbjct 164 LFLVPAITEDGVAVFLVEPSDAGVSITRQSTTDFSSAALVEFDSVQIPADRVLGSVAQGS 223 Query 191 DVAAHRVNQLALAVMGAYADGLVAGALRLTADYVANRKQFGKPLSTFQTVAAQLAEVYIA 250 D+AA V ++ L AY G++ AL+LTA+Y R QFG+P+ +FQ VA +LA+ YI Sbjct 224 DIAAWIVERIQLG-SSAYQYGVLDQALKLTAEYATERVQFGRPIGSFQAVAQRLADGYID 282 Query 251 SRTIDLVAKSVIWRLAEDLDAGDDLGVLGYWVTSQAPPAMQICHHLHGGMGMDVTYPMHR 310 + + L + WRL+E L + + +W H+HGG+G+D +P+HR Sbjct 283 VKGVRLTLWAAAWRLSEGLPSDGAVQTAKFWAADAGHRVGHTAVHVHGGVGLDEDHPVHR 342 Query 311 YYSTIKDLTRLLGGPSHRLELLG 333 Y+ K LLG + +L LG Sbjct 343 YFLAAKHHEFLLGNATDQLRALG 365 >gi|41408686|ref|NP_961522.1| hypothetical protein MAP2588 [Mycobacterium avium subsp. paratuberculosis K-10] gi|41397044|gb|AAS04905.1| hypothetical protein MAP_2588 [Mycobacterium avium subsp. paratuberculosis K-10] gi|336458677|gb|EGO37639.1| acyl-CoA dehydrogenase [Mycobacterium avium subsp. paratuberculosis S397] Length=373 Score = 155 bits (392), Expect = 9e-36, Method: Compositional matrix adjust. Identities = 121/369 (33%), Positives = 170/369 (47%), Gaps = 32/369 (8%) Query 1 MDFDPTAEQQAVADVVTSVLERDISWEALV------------------CGGVTALPVPER 42 MDF T EQ+ + + + ER + E L + +PE Sbjct 1 MDFSFTEEQETIGKLARDLFERRATPERLTELEVGDTRHDAALWEELAAADLLGAALPEA 60 Query 43 LGGD---GVGLFEVGALLTEVGRHGAVTPALATLGLGVVPLLELASAEQQDRFLAGVAKG 99 +GG G G E+G LL EVG A PA ATL LG + S+EQQ R L GV G Sbjct 61 VGGSCASGGGFVELGVLLAEVGYGVAPVPAYATLVLGADSIARHGSSEQQQRVLPGVIAG 120 Query 100 G-VLTAALNEPGAALPDRPATSFV----GGRLSGTKVGVGYAEQADWMLVTA-----DNA 149 +LTA L EPG + P RPAT+ RL G K V A+ AD ML+ A D Sbjct 121 SRILTAGLAEPGRSDPARPATTARRDGPNWRLDGAKELVPAAQLADTMLIPAVLDDGDVG 180 Query 150 VVVVSPTADGVRMVRTPTSNGSDEYVMTMDGVAVADCDILADVA-AHRVNQLALAVMGAY 208 + +++ A GV + PT+N + + G V++ D +A + + AL + A Sbjct 181 LFLLAADAAGVEIRPVPTTNREPHADVFLAGARVSETDRIAGIGLVESLLTRALVALCAI 240 Query 209 ADGLVAGALRLTADYVANRKQFGKPLSTFQTVAAQLAEVYIASRTIDLVAKSVIWRLAED 268 G+V ALR+ A Y R+QFG+P+ +FQ V ++A+ +I I W +A Sbjct 241 QLGVVERALRIAAKYTTGREQFGRPIGSFQAVQQRMADAFIDVEAIRWTTWQAAWLVAHG 300 Query 269 LDAGDDLGVLGYWVTSQAPPAMQICHHLHGGMGMDVTYPMHRYYSTIKDLTRLLGGPSHR 328 A + +W H+HGG+G+DVTYP+HRY+ K LG S + Sbjct 301 RPADRAARIAKFWAAEAGARVAATAQHVHGGIGIDVTYPLHRYFLWAKHNELTLGPASAQ 360 Query 329 LELLGARCS 337 L LGA S Sbjct 361 LAHLGATYS 369 >gi|254774212|ref|ZP_05215728.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium avium subsp. avium ATCC 25291] Length=373 Score = 153 bits (386), Expect = 5e-35, Method: Compositional matrix adjust. Identities = 120/369 (33%), Positives = 169/369 (46%), Gaps = 32/369 (8%) Query 1 MDFDPTAEQQAVADVVTSVLERDISWEALV------------------CGGVTALPVPER 42 MDF T EQ+ + + + E + E L + +PE Sbjct 1 MDFSFTEEQETIGKLARDLFEHRATPERLTELEAGDTRHDAALWEELAAADLLGAALPEA 60 Query 43 LGGD---GVGLFEVGALLTEVGRHGAVTPALATLGLGVVPLLELASAEQQDRFLAGVAKG 99 +GG G G E+G LL EVG A PA ATL LG + S+EQQ R L GV G Sbjct 61 VGGSCASGGGFVELGVLLAEVGYGVAPVPAYATLVLGADSIARHGSSEQQQRVLPGVIAG 120 Query 100 G-VLTAALNEPGAALPDRPATSFV----GGRLSGTKVGVGYAEQADWMLVTA-----DNA 149 +LTA L EP + P RPAT+ RL G K V A+ AD ML+ A D Sbjct 121 SRILTAGLAEPSRSDPARPATTARRDGPNWRLDGAKELVPAAQLADTMLIPAALDGGDVG 180 Query 150 VVVVSPTADGVRMVRTPTSNGSDEYVMTMDGVAVADCDILADVA-AHRVNQLALAVMGAY 208 + ++ A GV + PT+N + +DG V++ D +A + + AL + A Sbjct 181 LFLLVADAAGVEIRPVPTTNREPHADVFLDGARVSEADRIAGMGLVESLLTRALVALCAI 240 Query 209 ADGLVAGALRLTADYVANRKQFGKPLSTFQTVAAQLAEVYIASRTIDLVAKSVIWRLAED 268 G+V ALR+ A+Y R+QFG+P+ +FQ V ++A+ +I I W +A Sbjct 241 QLGVVERALRIAAEYTTGREQFGRPIGSFQAVQQRMADAFIDVEAIRWTTWQAAWLVAHG 300 Query 269 LDAGDDLGVLGYWVTSQAPPAMQICHHLHGGMGMDVTYPMHRYYSTIKDLTRLLGGPSHR 328 A + +W H+HGG+G+DVTYP+HRY+ K LG S + Sbjct 301 RPADRAARIAKFWAAEAGARVAATAQHVHGGIGIDVTYPLHRYFLWAKHNELTLGPASAQ 360 Query 329 LELLGARCS 337 L LGA S Sbjct 361 LAHLGATYS 369 Lambda K H 0.319 0.135 0.398 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 614457248732 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40