BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv3547
Length=151
Score E
Sequences producing significant alignments: (Bits) Value
gi|15610683|ref|NP_218064.1| hypothetical protein Rv3547 [Mycoba... 314 4e-84
gi|289445139|ref|ZP_06434883.1| conserved hypothetical protein [... 312 1e-83
gi|240172838|ref|ZP_04751497.1| hypothetical protein MkanA1_2623... 285 2e-75
gi|183985003|ref|YP_001853294.1| hypothetical protein MMAR_5035 ... 285 2e-75
gi|118619293|ref|YP_907625.1| hypothetical protein MUL_4109 [Myc... 244 2e-63
gi|41406617|ref|NP_959453.1| hypothetical protein MAP0519c [Myco... 226 8e-58
gi|254822629|ref|ZP_05227630.1| hypothetical protein MintA_22059... 224 2e-57
gi|118467215|ref|YP_879893.1| AclJ protein [Mycobacterium avium ... 223 8e-57
gi|108801643|ref|YP_641840.1| hypothetical protein Mmcs_4680 [My... 220 5e-56
gi|126437629|ref|YP_001073320.1| hypothetical protein Mjls_5065 ... 219 2e-55
gi|342862374|ref|ZP_08719014.1| hypothetical protein MCOL_25903 ... 218 2e-55
gi|296166578|ref|ZP_06849008.1| hypothetical protein HMPREF0591_... 216 6e-55
gi|336458407|gb|EGO37381.1| deazaflavin-dependent nitroreductase... 215 1e-54
gi|333992336|ref|YP_004524950.1| hypothetical protein JDM601_369... 176 8e-43
gi|325674907|ref|ZP_08154594.1| hypothetical protein HMPREF0724_... 176 1e-42
gi|312138188|ref|YP_004005524.1| hypothetical protein REQ_07220 ... 174 4e-42
gi|111021649|ref|YP_704621.1| hypothetical protein RHA1_ro04677 ... 174 6e-42
gi|226304413|ref|YP_002764371.1| hypothetical protein RER_09240 ... 168 2e-40
gi|229494560|ref|ZP_04388323.1| conserved hypothetical protein [... 168 3e-40
gi|226364186|ref|YP_002781968.1| hypothetical protein ROP_47760 ... 166 1e-39
gi|118469733|ref|YP_890224.1| hypothetical protein MSMEG_5998 [M... 164 4e-39
gi|120406209|ref|YP_956038.1| hypothetical protein Mvan_5261 [My... 163 6e-39
gi|169627712|ref|YP_001701361.1| hypothetical protein MAB_0609c ... 162 2e-38
gi|343928246|ref|ZP_08767700.1| hypothetical protein GOALK_111_0... 162 2e-38
gi|145222097|ref|YP_001132775.1| hypothetical protein Mflv_1505 ... 162 2e-38
gi|342862375|ref|ZP_08719015.1| AclJ protein [Mycobacterium colo... 161 2e-38
gi|315446161|ref|YP_004079040.1| hypothetical protein Mspyr1_466... 160 7e-38
gi|296166579|ref|ZP_06849009.1| AclJ protein [Mycobacterium para... 159 1e-37
gi|254822630|ref|ZP_05227631.1| hypothetical protein MintA_22064... 155 1e-36
gi|262203831|ref|YP_003275039.1| hypothetical protein Gbro_3972 ... 155 3e-36
gi|254823479|ref|ZP_05228480.1| hypothetical protein MintA_26353... 144 3e-33
gi|326383127|ref|ZP_08204816.1| hypothetical protein SCNU_09321 ... 144 4e-33
gi|269127186|ref|YP_003300556.1| hypothetical protein Tcur_2976 ... 135 3e-30
gi|108797033|ref|YP_637230.1| hypothetical protein Mmcs_0052 [My... 124 4e-27
gi|126432655|ref|YP_001068346.1| hypothetical protein Mjls_0042 ... 123 9e-27
gi|302526918|ref|ZP_07279260.1| conserved hypothetical protein [... 120 6e-26
gi|158317142|ref|YP_001509650.1| hypothetical protein Franean1_5... 116 9e-25
gi|340525834|gb|AEK41039.1| hypothetical protein RAM_12745 [Amyc... 113 9e-24
gi|300784413|ref|YP_003764704.1| hypothetical protein AMED_2507 ... 113 1e-23
gi|302529146|ref|ZP_07281488.1| proline iminopeptidase [Streptom... 113 1e-23
gi|16945722|dbj|BAB72053.1| AclJ [Streptomyces galilaeus] 112 2e-23
gi|312198241|ref|YP_004018302.1| hypothetical protein FraEuI1c_4... 112 2e-23
gi|257055151|ref|YP_003132983.1| hypothetical protein Svir_11000... 111 3e-23
gi|229490334|ref|ZP_04384175.1| conserved hypothetical protein [... 111 3e-23
gi|226307016|ref|YP_002766976.1| hypothetical protein RER_35290 ... 111 3e-23
gi|288920589|ref|ZP_06414894.1| hypothetical protein FrEUN1fDRAF... 111 4e-23
gi|269126740|ref|YP_003300110.1| hypothetical protein Tcur_2511 ... 110 5e-23
gi|300784815|ref|YP_003765106.1| hypothetical protein AMED_2910 ... 110 6e-23
gi|254483121|ref|ZP_05096355.1| conserved domain protein [marine... 110 6e-23
gi|288920153|ref|ZP_06414470.1| hypothetical protein FrEUN1fDRAF... 110 6e-23
>gi|15610683|ref|NP_218064.1| hypothetical protein Rv3547 [Mycobacterium tuberculosis H37Rv]
gi|15843159|ref|NP_338196.1| hypothetical protein MT3651 [Mycobacterium tuberculosis CDC1551]
gi|31794723|ref|NP_857216.1| hypothetical protein Mb3577 [Mycobacterium bovis AF2122/97]
79 more sequence titles
Length=151
Score = 314 bits (804), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 151/151 (100%), Positives = 151/151 (100%), Gaps = 0/151 (0%)
Query 1 MPKSPPRFLNSPLSDFFIKWMSRINTWMYRRNDGEGLGGTFQKIPVALLTTTGRKTGQPR 60
MPKSPPRFLNSPLSDFFIKWMSRINTWMYRRNDGEGLGGTFQKIPVALLTTTGRKTGQPR
Sbjct 1 MPKSPPRFLNSPLSDFFIKWMSRINTWMYRRNDGEGLGGTFQKIPVALLTTTGRKTGQPR 60
Query 61 VNPLYFLRDGGRVIVAASKGGAEKNPMWYLNLKANPKVQVQIKKEVLDLTARDATDEERA 120
VNPLYFLRDGGRVIVAASKGGAEKNPMWYLNLKANPKVQVQIKKEVLDLTARDATDEERA
Sbjct 61 VNPLYFLRDGGRVIVAASKGGAEKNPMWYLNLKANPKVQVQIKKEVLDLTARDATDEERA 120
Query 121 EYWPQLVTMYPSYQDYQSWTDRTIPIVVCEP 151
EYWPQLVTMYPSYQDYQSWTDRTIPIVVCEP
Sbjct 121 EYWPQLVTMYPSYQDYQSWTDRTIPIVVCEP 151
>gi|289445139|ref|ZP_06434883.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A]
gi|289418097|gb|EFD15298.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A]
Length=151
Score = 312 bits (799), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 150/151 (99%), Positives = 151/151 (100%), Gaps = 0/151 (0%)
Query 1 MPKSPPRFLNSPLSDFFIKWMSRINTWMYRRNDGEGLGGTFQKIPVALLTTTGRKTGQPR 60
MPKSPPRFLNSPLSDFFIKWMSRINTWMYRRNDGEGLGGTFQKIPVALLTTTGRKTGQPR
Sbjct 1 MPKSPPRFLNSPLSDFFIKWMSRINTWMYRRNDGEGLGGTFQKIPVALLTTTGRKTGQPR 60
Query 61 VNPLYFLRDGGRVIVAASKGGAEKNPMWYLNLKANPKVQVQIKKEVLDLTARDATDEERA 120
VNPLYFLRDGGRVIVAASKGGAEKNPMWYLNLKANPKVQVQIKKEVLDLTAR+ATDEERA
Sbjct 61 VNPLYFLRDGGRVIVAASKGGAEKNPMWYLNLKANPKVQVQIKKEVLDLTARNATDEERA 120
Query 121 EYWPQLVTMYPSYQDYQSWTDRTIPIVVCEP 151
EYWPQLVTMYPSYQDYQSWTDRTIPIVVCEP
Sbjct 121 EYWPQLVTMYPSYQDYQSWTDRTIPIVVCEP 151
>gi|240172838|ref|ZP_04751497.1| hypothetical protein MkanA1_26232 [Mycobacterium kansasii ATCC
12478]
Length=151
Score = 285 bits (729), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 135/151 (90%), Positives = 143/151 (95%), Gaps = 0/151 (0%)
Query 1 MPKSPPRFLNSPLSDFFIKWMSRINTWMYRRNDGEGLGGTFQKIPVALLTTTGRKTGQPR 60
MPKSPPRFLNSP +D IKWMSR+NTWMYRRN GEGLGGTFQKIPVALLTTTGRKTGQPR
Sbjct 1 MPKSPPRFLNSPFTDVLIKWMSRLNTWMYRRNGGEGLGGTFQKIPVALLTTTGRKTGQPR 60
Query 61 VNPLYFLRDGGRVIVAASKGGAEKNPMWYLNLKANPKVQVQIKKEVLDLTARDATDEERA 120
V+PLYFLRDG RVIVAASKGGA+KNPMWYLNLKANPKV VQIKKE+LDLTARDATDEERA
Sbjct 61 VSPLYFLRDGDRVIVAASKGGADKNPMWYLNLKANPKVSVQIKKEILDLTARDATDEERA 120
Query 121 EYWPQLVTMYPSYQDYQSWTDRTIPIVVCEP 151
+YW QLV MYP+Y+DYQSWTDRTIPIVVCEP
Sbjct 121 KYWRQLVDMYPTYEDYQSWTDRTIPIVVCEP 151
>gi|183985003|ref|YP_001853294.1| hypothetical protein MMAR_5035 [Mycobacterium marinum M]
gi|183178329|gb|ACC43439.1| conserved hypothetical protein [Mycobacterium marinum M]
Length=151
Score = 285 bits (729), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 136/151 (91%), Positives = 143/151 (95%), Gaps = 0/151 (0%)
Query 1 MPKSPPRFLNSPLSDFFIKWMSRINTWMYRRNDGEGLGGTFQKIPVALLTTTGRKTGQPR 60
MPKSPPRFLNSP +DFFIKWMSRINT+MYRRN GEGLGGTFQKIPVALLTTTGRKTG+PR
Sbjct 1 MPKSPPRFLNSPFTDFFIKWMSRINTFMYRRNGGEGLGGTFQKIPVALLTTTGRKTGEPR 60
Query 61 VNPLYFLRDGGRVIVAASKGGAEKNPMWYLNLKANPKVQVQIKKEVLDLTARDATDEERA 120
V+PLYF RDG RVIVAASKGG+ KNPMWYLNLKANPKV VQIKKEVLDLTARDATDEERA
Sbjct 61 VSPLYFHRDGDRVIVAASKGGSAKNPMWYLNLKANPKVGVQIKKEVLDLTARDATDEERA 120
Query 121 EYWPQLVTMYPSYQDYQSWTDRTIPIVVCEP 151
YWP+LV MYPSY+DYQSWTDRTIPIVVCEP
Sbjct 121 RYWPKLVDMYPSYEDYQSWTDRTIPIVVCEP 151
>gi|118619293|ref|YP_907625.1| hypothetical protein MUL_4109 [Mycobacterium ulcerans Agy99]
gi|118571403|gb|ABL06154.1| conserved hypothetical protein [Mycobacterium ulcerans Agy99]
Length=165
Score = 244 bits (624), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 118/133 (89%), Positives = 125/133 (94%), Gaps = 0/133 (0%)
Query 1 MPKSPPRFLNSPLSDFFIKWMSRINTWMYRRNDGEGLGGTFQKIPVALLTTTGRKTGQPR 60
MPKSPPRFLNSP +DFFIKWMSRINT+MYRRNDGEGLGGTFQKIPVALLTTTGRKTG+PR
Sbjct 1 MPKSPPRFLNSPYTDFFIKWMSRINTFMYRRNDGEGLGGTFQKIPVALLTTTGRKTGEPR 60
Query 61 VNPLYFLRDGGRVIVAASKGGAEKNPMWYLNLKANPKVQVQIKKEVLDLTARDATDEERA 120
V+PLYF RDG RVIVAASKGG+ KNPMWYLNLKANP V VQIKKEVLDLTARDATDEERA
Sbjct 61 VSPLYFHRDGDRVIVAASKGGSAKNPMWYLNLKANPNVGVQIKKEVLDLTARDATDEERA 120
Query 121 EYWPQLVTMYPSY 133
YWP+LV MYPS+
Sbjct 121 RYWPKLVDMYPSW 133
>gi|41406617|ref|NP_959453.1| hypothetical protein MAP0519c [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|254773570|ref|ZP_05215086.1| hypothetical protein MaviaA2_02685 [Mycobacterium avium subsp.
avium ATCC 25291]
gi|41394966|gb|AAS02836.1| hypothetical protein MAP_0519c [Mycobacterium avium subsp. paratuberculosis
K-10]
Length=148
Score = 226 bits (576), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 106/146 (73%), Positives = 126/146 (87%), Gaps = 1/146 (0%)
Query 6 PRFLNSPLSDFFIKWMSRINTWMYRRNDGEGLGGTFQKIPVALLTTTGRKTGQPRVNPLY 65
P+ LNSP++ FFIKWMSR+NTWMYR + G+ GGTFQK PVALLTTTGRKTGQPRV+PL
Sbjct 4 PKSLNSPMTGFFIKWMSRVNTWMYRVSRGK-WGGTFQKRPVALLTTTGRKTGQPRVSPLL 62
Query 66 FLRDGGRVIVAASKGGAEKNPMWYLNLKANPKVQVQIKKEVLDLTARDATDEERAEYWPQ 125
+LR+G RVI+ AS+GG +K+P+WYLNLKANPKV VQIK EVL L ARDAT EER +YWP+
Sbjct 63 YLREGDRVILVASQGGRDKHPLWYLNLKANPKVSVQIKDEVLQLQARDATPEEREQYWPK 122
Query 126 LVTMYPSYQDYQSWTDRTIPIVVCEP 151
LV MYPS+ DYQSWTDR IP+V+C+P
Sbjct 123 LVAMYPSFDDYQSWTDRVIPVVICDP 148
>gi|254822629|ref|ZP_05227630.1| hypothetical protein MintA_22059 [Mycobacterium intracellulare
ATCC 13950]
Length=150
Score = 224 bits (572), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 104/151 (69%), Positives = 127/151 (85%), Gaps = 1/151 (0%)
Query 1 MPKSPPRFLNSPLSDFFIKWMSRINTWMYRRNDGEGLGGTFQKIPVALLTTTGRKTGQPR 60
MPK PR LNSP F IKWM++ N W+YRR++G+ GGTFQK PVALLTTTGRKTG+PR
Sbjct 1 MPKPKPRALNSPWVAFIIKWMAKGNAWIYRRSNGK-FGGTFQKAPVALLTTTGRKTGEPR 59
Query 61 VNPLYFLRDGGRVIVAASKGGAEKNPMWYLNLKANPKVQVQIKKEVLDLTARDATDEERA 120
V+PL +LR+G RV++ ASKGG++K+P+WYLNLKANPKV VQIK EVL L ARDAT+ ERA
Sbjct 60 VSPLLYLREGDRVVLVASKGGSDKHPLWYLNLKANPKVSVQIKDEVLHLQARDATEAERA 119
Query 121 EYWPQLVTMYPSYQDYQSWTDRTIPIVVCEP 151
EYWP+L MYPS+ DY+SWTDR IP+V+C+P
Sbjct 120 EYWPKLDAMYPSFDDYRSWTDRVIPVVICDP 150
>gi|118467215|ref|YP_879893.1| AclJ protein [Mycobacterium avium 104]
gi|118168502|gb|ABK69399.1| AclJ protein [Mycobacterium avium 104]
Length=142
Score = 223 bits (568), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 104/143 (73%), Positives = 124/143 (87%), Gaps = 1/143 (0%)
Query 9 LNSPLSDFFIKWMSRINTWMYRRNDGEGLGGTFQKIPVALLTTTGRKTGQPRVNPLYFLR 68
+NSP++ FFIKWMSR+NTWMYR + G+ GGTFQK PVALLTTTGRKTGQPRV+PL +LR
Sbjct 1 MNSPMTGFFIKWMSRVNTWMYRVSRGK-WGGTFQKRPVALLTTTGRKTGQPRVSPLLYLR 59
Query 69 DGGRVIVAASKGGAEKNPMWYLNLKANPKVQVQIKKEVLDLTARDATDEERAEYWPQLVT 128
+G RVI+ AS+GG +K+P+WYLNLKANPKV VQIK EVL L ARDAT EER +YWP+LV
Sbjct 60 EGDRVILVASQGGRDKHPLWYLNLKANPKVSVQIKDEVLQLQARDATPEEREQYWPKLVA 119
Query 129 MYPSYQDYQSWTDRTIPIVVCEP 151
MYPS+ DYQSWTDR IP+V+C+P
Sbjct 120 MYPSFDDYQSWTDRVIPVVICDP 142
>gi|108801643|ref|YP_641840.1| hypothetical protein Mmcs_4680 [Mycobacterium sp. MCS]
gi|119870794|ref|YP_940746.1| hypothetical protein Mkms_4766 [Mycobacterium sp. KMS]
gi|108772062|gb|ABG10784.1| hypothetical protein Mmcs_4680 [Mycobacterium sp. MCS]
gi|119696883|gb|ABL93956.1| Mycobacterium tuberculosis paralogous family 11 [Mycobacterium
sp. KMS]
Length=150
Score = 220 bits (561), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 104/151 (69%), Positives = 125/151 (83%), Gaps = 1/151 (0%)
Query 1 MPKSPPRFLNSPLSDFFIKWMSRINTWMYRRNDGEGLGGTFQKIPVALLTTTGRKTGQPR 60
MPKSPP LNSP +DFFIKWMSR NT +Y+ + G LGG+F K PVALLTT GRKTG+PR
Sbjct 1 MPKSPPSRLNSPAADFFIKWMSRGNTLVYKLSGGR-LGGSFGKAPVALLTTIGRKTGEPR 59
Query 61 VNPLYFLRDGGRVIVAASKGGAEKNPMWYLNLKANPKVQVQIKKEVLDLTARDATDEERA 120
V+PL FLRDG RVI+ AS+GG++K+PMWYLNL+ANP VQVQIK +VL LTAR AT++E A
Sbjct 60 VSPLIFLRDGERVILVASRGGSDKHPMWYLNLRANPTVQVQIKDDVLTLTARLATEDEHA 119
Query 121 EYWPQLVTMYPSYQDYQSWTDRTIPIVVCEP 151
YWP+L MYP + +Y+SWTDR IPIV+CEP
Sbjct 120 HYWPKLTAMYPDFDNYRSWTDREIPIVICEP 150
>gi|126437629|ref|YP_001073320.1| hypothetical protein Mjls_5065 [Mycobacterium sp. JLS]
gi|126237429|gb|ABO00830.1| conserved hypothetical protein [Mycobacterium sp. JLS]
Length=150
Score = 219 bits (557), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 103/151 (69%), Positives = 124/151 (83%), Gaps = 1/151 (0%)
Query 1 MPKSPPRFLNSPLSDFFIKWMSRINTWMYRRNDGEGLGGTFQKIPVALLTTTGRKTGQPR 60
MPKSPP LNSP +DFFIKWMSR NT +Y+ + G LGG+F K PVALLTT GRKTG+PR
Sbjct 1 MPKSPPTRLNSPAADFFIKWMSRGNTLVYKLSGGR-LGGSFGKAPVALLTTIGRKTGEPR 59
Query 61 VNPLYFLRDGGRVIVAASKGGAEKNPMWYLNLKANPKVQVQIKKEVLDLTARDATDEERA 120
V+PL FLRDG RVI+ AS+GG++K+PMWYLNL+ANP VQVQI+ +VL LTAR AT++E A
Sbjct 60 VSPLIFLRDGERVILVASRGGSDKHPMWYLNLRANPTVQVQIRDDVLTLTARLATEDEHA 119
Query 121 EYWPQLVTMYPSYQDYQSWTDRTIPIVVCEP 151
YWP+L MYP + Y+SWTDR IPIV+CEP
Sbjct 120 HYWPKLTAMYPDFDSYRSWTDREIPIVICEP 150
>gi|342862374|ref|ZP_08719014.1| hypothetical protein MCOL_25903 [Mycobacterium colombiense CECT
3035]
gi|342130045|gb|EGT83379.1| hypothetical protein MCOL_25903 [Mycobacterium colombiense CECT
3035]
Length=150
Score = 218 bits (556), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 101/151 (67%), Positives = 127/151 (85%), Gaps = 1/151 (0%)
Query 1 MPKSPPRFLNSPLSDFFIKWMSRINTWMYRRNDGEGLGGTFQKIPVALLTTTGRKTGQPR 60
MPK PR LN+P F IKWM++ NTW+Y+ ++G+ GGTFQK PVALLTTTGRKTG+PR
Sbjct 1 MPKPKPRSLNAPWVGFIIKWMAKGNTWIYKLSNGK-FGGTFQKAPVALLTTTGRKTGEPR 59
Query 61 VNPLYFLRDGGRVIVAASKGGAEKNPMWYLNLKANPKVQVQIKKEVLDLTARDATDEERA 120
V+PL +LR+G RV++ ASKGG++K+P+WYLNLKA+PKV VQIK EVL L ARDAT+ ERA
Sbjct 60 VSPLLYLREGNRVVLVASKGGSDKHPLWYLNLKADPKVSVQIKDEVLQLRARDATEAERA 119
Query 121 EYWPQLVTMYPSYQDYQSWTDRTIPIVVCEP 151
EYWP+L MYPS+ DY++WTDR IPIV+C+P
Sbjct 120 EYWPKLDAMYPSFDDYRAWTDRVIPIVICDP 150
>gi|296166578|ref|ZP_06849008.1| hypothetical protein HMPREF0591_2449 [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295898064|gb|EFG77640.1| hypothetical protein HMPREF0591_2449 [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length=150
Score = 216 bits (551), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 102/151 (68%), Positives = 124/151 (83%), Gaps = 1/151 (0%)
Query 1 MPKSPPRFLNSPLSDFFIKWMSRINTWMYRRNDGEGLGGTFQKIPVALLTTTGRKTGQPR 60
MPK PR LN+P F IKWM++ NTW+YR ++G LGGTF PVALLTTTGRKTG+PR
Sbjct 1 MPKPKPRSLNAPWVGFIIKWMAKGNTWIYRHSNGR-LGGTFGNAPVALLTTTGRKTGEPR 59
Query 61 VNPLYFLRDGGRVIVAASKGGAEKNPMWYLNLKANPKVQVQIKKEVLDLTARDATDEERA 120
V+PL +LR+G RV++ ASKGG++KNP+WYLNLKANP+V VQIK EVL L ARDAT+ ER
Sbjct 60 VSPLLYLREGNRVVLVASKGGSDKNPLWYLNLKANPEVSVQIKDEVLRLRARDATEAERE 119
Query 121 EYWPQLVTMYPSYQDYQSWTDRTIPIVVCEP 151
EYWP+L MYPS+ DY+SWTDR IPIV+C+P
Sbjct 120 EYWPKLDKMYPSFGDYRSWTDRVIPIVICDP 150
>gi|336458407|gb|EGO37381.1| deazaflavin-dependent nitroreductase family protein [Mycobacterium
avium subsp. paratuberculosis S397]
Length=138
Score = 215 bits (548), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 101/139 (73%), Positives = 120/139 (87%), Gaps = 1/139 (0%)
Query 13 LSDFFIKWMSRINTWMYRRNDGEGLGGTFQKIPVALLTTTGRKTGQPRVNPLYFLRDGGR 72
++ FFIKWMSR+NTWMYR + G+ GGTFQK PVALLTTTGRKTGQPRV+PL +LR+G R
Sbjct 1 MTGFFIKWMSRVNTWMYRVSRGK-WGGTFQKRPVALLTTTGRKTGQPRVSPLLYLREGDR 59
Query 73 VIVAASKGGAEKNPMWYLNLKANPKVQVQIKKEVLDLTARDATDEERAEYWPQLVTMYPS 132
VI+ AS+GG +K+P+WYLNLKANPKV VQIK EVL L ARDAT EER +YWP+LV MYPS
Sbjct 60 VILVASQGGRDKHPLWYLNLKANPKVSVQIKDEVLQLQARDATPEEREQYWPKLVAMYPS 119
Query 133 YQDYQSWTDRTIPIVVCEP 151
+ DYQSWTDR IP+V+C+P
Sbjct 120 FDDYQSWTDRVIPVVICDP 138
>gi|333992336|ref|YP_004524950.1| hypothetical protein JDM601_3696 [Mycobacterium sp. JDM601]
gi|333488304|gb|AEF37696.1| conserved hypothetical protein [Mycobacterium sp. JDM601]
Length=159
Score = 176 bits (447), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 87/154 (57%), Positives = 111/154 (73%), Gaps = 9/154 (5%)
Query 6 PRFLNSPLSDFFIKWMSRINTWMYRRNDGEGLGGT-------FQKIP-VALLTTTGRKTG 57
P+ L+SP++ IKWMSR NTW Y+ G +GG F ++P V +LTTTGRKTG
Sbjct 7 PKSLDSPVTGTIIKWMSRANTWAYKATGGR-VGGKWRLGTKHFGEVPEVGILTTTGRKTG 65
Query 58 QPRVNPLYFLRDGGRVIVAASKGGAEKNPMWYLNLKANPKVQVQIKKEVLDLTARDATDE 117
+PR +PL FLR+G RVI+ AS+GG NPMWY NLKANP+V +I+ EVL L ARDA +
Sbjct 66 EPRESPLLFLREGDRVILVASQGGRATNPMWYGNLKANPQVSFRIRNEVLRLRARDADES 125
Query 118 ERAEYWPQLVTMYPSYQDYQSWTDRTIPIVVCEP 151
ERA YWP+L MYP + +Y++WTDR IPIV+CEP
Sbjct 126 ERAAYWPKLDAMYPDFVNYRAWTDREIPIVICEP 159
>gi|325674907|ref|ZP_08154594.1| hypothetical protein HMPREF0724_12376 [Rhodococcus equi ATCC
33707]
gi|325554493|gb|EGD24168.1| hypothetical protein HMPREF0724_12376 [Rhodococcus equi ATCC
33707]
Length=156
Score = 176 bits (445), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 89/157 (57%), Positives = 110/157 (71%), Gaps = 8/157 (5%)
Query 1 MPKSPPRFLNSPLSDFFIKWMSRINTWMYRRNDGEGLGGTFQ-------KIPVALLTTTG 53
M P L+S + IKWMS+ N +YR G LGG ++ IPV LLTTTG
Sbjct 1 MTTQRPPGLDSKYTVDIIKWMSKTNVKLYRATGGR-LGGKWRVGSAFPWGIPVCLLTTTG 59
Query 54 RKTGQPRVNPLYFLRDGGRVIVAASKGGAEKNPMWYLNLKANPKVQVQIKKEVLDLTARD 113
RK+GQPRV+PL FL DGGRVI+ AS+GG KNPMWYLN++ANP+V +QIK + + AR
Sbjct 60 RKSGQPRVSPLLFLEDGGRVILVASQGGLPKNPMWYLNIRANPEVTIQIKSRIRTMRARV 119
Query 114 ATDEERAEYWPQLVTMYPSYQDYQSWTDRTIPIVVCE 150
ATDEERAE WP+LV MY + +YQSWTDR IP+V+CE
Sbjct 120 ATDEERAELWPRLVDMYADFDNYQSWTDRQIPVVICE 156
>gi|312138188|ref|YP_004005524.1| hypothetical protein REQ_07220 [Rhodococcus equi 103S]
gi|311887527|emb|CBH46839.1| conserved hypothetical protein [Rhodococcus equi 103S]
Length=156
Score = 174 bits (441), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 88/157 (57%), Positives = 109/157 (70%), Gaps = 8/157 (5%)
Query 1 MPKSPPRFLNSPLSDFFIKWMSRINTWMYRRNDGEGLGGTFQ-------KIPVALLTTTG 53
M P L+S + IKWMS+ N +YR G LGG ++ IPV LLTTTG
Sbjct 1 MTTQRPSGLDSKYTVDIIKWMSKTNVKLYRATGGR-LGGKWRVGSAFPWGIPVCLLTTTG 59
Query 54 RKTGQPRVNPLYFLRDGGRVIVAASKGGAEKNPMWYLNLKANPKVQVQIKKEVLDLTARD 113
RK+GQPRV+PL FL DG RVI+ AS+GG KNPMWYLN++ANP+V +QIK + + AR
Sbjct 60 RKSGQPRVSPLLFLEDGDRVILVASQGGLPKNPMWYLNIRANPEVTIQIKSRIRTMRARV 119
Query 114 ATDEERAEYWPQLVTMYPSYQDYQSWTDRTIPIVVCE 150
ATDEERAE WP+LV MY + +YQSWTDR IP+V+CE
Sbjct 120 ATDEERAELWPRLVDMYADFDNYQSWTDRQIPVVICE 156
>gi|111021649|ref|YP_704621.1| hypothetical protein RHA1_ro04677 [Rhodococcus jostii RHA1]
gi|110821179|gb|ABG96463.1| conserved hypothetical protein [Rhodococcus jostii RHA1]
Length=161
Score = 174 bits (440), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 87/156 (56%), Positives = 110/156 (71%), Gaps = 7/156 (4%)
Query 2 PKSPPRFLNSPLSDFFIKWMSRINTWMYRRNDGE-----GLGGTFQK-IPVALLTTTGRK 55
P PP L+S + FIKWMS+IN +YRR G +G F + +PV LLTTTGRK
Sbjct 6 PARPP-GLDSKWTVSFIKWMSKINVVLYRRTGGRLGSKWRVGSAFPRGLPVCLLTTTGRK 64
Query 56 TGQPRVNPLYFLRDGGRVIVAASKGGAEKNPMWYLNLKANPKVQVQIKKEVLDLTARDAT 115
+G+PR++PL FL DG R+I+ AS+GG K+PMWYLNL+ANP V VQ+K V +TA A
Sbjct 65 SGEPRISPLLFLEDGDRIILVASQGGLPKHPMWYLNLRANPDVTVQVKSRVRPMTAHVAD 124
Query 116 DEERAEYWPQLVTMYPSYQDYQSWTDRTIPIVVCEP 151
EERA WP+LV MYP + +YQ+WTDRTIP+VVC P
Sbjct 125 PEERARLWPRLVAMYPDFDNYQAWTDRTIPVVVCTP 160
>gi|226304413|ref|YP_002764371.1| hypothetical protein RER_09240 [Rhodococcus erythropolis PR4]
gi|226183528|dbj|BAH31632.1| conserved hypothetical protein [Rhodococcus erythropolis PR4]
Length=162
Score = 168 bits (426), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 79/156 (51%), Positives = 107/156 (69%), Gaps = 6/156 (3%)
Query 2 PKSPPRFLNSPLSDFFIKWMSRINTWMYRRNDGE-----GLGGTFQK-IPVALLTTTGRK 55
P + P+ L++P + IKWMS+ N MYR DG +G F + +P+ LLTTTGRK
Sbjct 4 PPAKPKGLDAPATVKIIKWMSKANVAMYRATDGRLGSKWRVGSAFPRGLPICLLTTTGRK 63
Query 56 TGQPRVNPLYFLRDGGRVIVAASKGGAEKNPMWYLNLKANPKVQVQIKKEVLDLTARDAT 115
+G+ R++PL FL DG VI+ AS+GG KNPMWYLN+K +P V VQIK + + AR +T
Sbjct 64 SGEERISPLLFLEDGENVILVASQGGLPKNPMWYLNIKTDPVVTVQIKSRIRSMKARVST 123
Query 116 DEERAEYWPQLVTMYPSYQDYQSWTDRTIPIVVCEP 151
++ERA WP L MYP + +YQ+WTDR IP++VCEP
Sbjct 124 EDERARLWPMLTAMYPDFDNYQAWTDRIIPVIVCEP 159
>gi|229494560|ref|ZP_04388323.1| conserved hypothetical protein [Rhodococcus erythropolis SK121]
gi|229318922|gb|EEN84780.1| conserved hypothetical protein [Rhodococcus erythropolis SK121]
Length=162
Score = 168 bits (425), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 79/156 (51%), Positives = 107/156 (69%), Gaps = 6/156 (3%)
Query 2 PKSPPRFLNSPLSDFFIKWMSRINTWMYRRNDGE-----GLGGTFQK-IPVALLTTTGRK 55
P + P+ L++P + IKWMS+ N MYR DG +G F + +P+ LLTTTGRK
Sbjct 4 PPAKPKGLDAPATVKIIKWMSKANVAMYRATDGRLGSKWRVGSAFPRGLPICLLTTTGRK 63
Query 56 TGQPRVNPLYFLRDGGRVIVAASKGGAEKNPMWYLNLKANPKVQVQIKKEVLDLTARDAT 115
+G+ R++PL FL DG VI+ AS+GG KNPMWYLN+K++P V VQIK + + AR A
Sbjct 64 SGEERISPLLFLEDGENVILVASQGGLPKNPMWYLNIKSDPVVTVQIKSRIRSMKARVAA 123
Query 116 DEERAEYWPQLVTMYPSYQDYQSWTDRTIPIVVCEP 151
++ERA WP L MYP + +YQ+WTDR IP++VCEP
Sbjct 124 EDERARLWPMLRAMYPDFDNYQAWTDRVIPVIVCEP 159
>gi|226364186|ref|YP_002781968.1| hypothetical protein ROP_47760 [Rhodococcus opacus B4]
gi|226242675|dbj|BAH53023.1| hypothetical protein [Rhodococcus opacus B4]
Length=169
Score = 166 bits (419), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 85/160 (54%), Positives = 110/160 (69%), Gaps = 10/160 (6%)
Query 2 PKSP----PRFLNSPLSDFFIKWMSRINTWMYRRNDGE-----GLGGTFQK-IPVALLTT 51
P SP P L+S + FIKWMS+IN +YRR G +G F + +PV LLTT
Sbjct 9 PDSPRSARPPGLDSRWTVSFIKWMSKINVVLYRRTGGRLGSKWRVGSAFPRGLPVCLLTT 68
Query 52 TGRKTGQPRVNPLYFLRDGGRVIVAASKGGAEKNPMWYLNLKANPKVQVQIKKEVLDLTA 111
TGRK+G PR++PL FL DG R+++ AS+GG K+PMWYLNL+ANP+V VQ+K V +TA
Sbjct 69 TGRKSGDPRISPLLFLEDGDRIVLVASQGGLPKHPMWYLNLRANPQVTVQVKSRVRPMTA 128
Query 112 RDATDEERAEYWPQLVTMYPSYQDYQSWTDRTIPIVVCEP 151
+ A ERA WP+LV MY + +YQ+WTDRTIP+VVC P
Sbjct 129 QVADPGERARLWPRLVDMYADFDNYQAWTDRTIPVVVCTP 168
>gi|118469733|ref|YP_890224.1| hypothetical protein MSMEG_5998 [Mycobacterium smegmatis str.
MC2 155]
gi|118171020|gb|ABK71916.1| conserved hypothetical protein [Mycobacterium smegmatis str.
MC2 155]
Length=159
Score = 164 bits (415), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 77/144 (54%), Positives = 104/144 (73%), Gaps = 2/144 (1%)
Query 9 LNSPLSDFFIKWMSRINTWMYRRNDGEGLGGTFQK-IPVALLTTTGRKTGQPRVNPLYFL 67
LN+ + IKWMSR T++++ +G+ LG F + V +LTT GRK+G+PR PL FL
Sbjct 16 LNAKSTGTLIKWMSRFQTFLFKTTNGK-LGNKFLRGTEVGILTTIGRKSGEPRDTPLLFL 74
Query 68 RDGGRVIVAASKGGAEKNPMWYLNLKANPKVQVQIKKEVLDLTARDATDEERAEYWPQLV 127
++G R+++ AS+GG NPMWYLNLKANPKV Q + E L L AR+ATD ER EYWP+L
Sbjct 75 QEGRRIVLVASQGGRATNPMWYLNLKANPKVTFQTRSEKLALVAREATDAERDEYWPKLD 134
Query 128 TMYPSYQDYQSWTDRTIPIVVCEP 151
MYP + +Y+S+TDR IPIV+C+P
Sbjct 135 AMYPDFANYRSYTDRKIPIVICDP 158
>gi|120406209|ref|YP_956038.1| hypothetical protein Mvan_5261 [Mycobacterium vanbaalenii PYR-1]
gi|119959027|gb|ABM16032.1| hypothetical protein Mvan_5261 [Mycobacterium vanbaalenii PYR-1]
Length=168
Score = 163 bits (413), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 80/150 (54%), Positives = 100/150 (67%), Gaps = 7/150 (4%)
Query 9 LNSPLSDFFIKWMSRINTWMYRRNDGE-------GLGGTFQKIPVALLTTTGRKTGQPRV 61
LNS IKWMS+ NTW Y+ G G PV +LTT GRK+GQPR
Sbjct 16 LNSKAVGVAIKWMSKFNTWAYKATGGRIGYNWRLGSNRFSAPPPVGILTTIGRKSGQPRE 75
Query 62 NPLYFLRDGGRVIVAASKGGAEKNPMWYLNLKANPKVQVQIKKEVLDLTARDATDEERAE 121
+PL FLR+G RV++ AS+GG NPMWYLN+KANP V QI+ E L L AR+ATD ER E
Sbjct 76 SPLLFLREGDRVVLVASQGGRASNPMWYLNVKANPAVTFQIRNEKLKLIAREATDAERDE 135
Query 122 YWPQLVTMYPSYQDYQSWTDRTIPIVVCEP 151
YWP+L MYP + +Y+S+TDR IPI++C+P
Sbjct 136 YWPKLDAMYPDFANYRSYTDRQIPILICDP 165
>gi|169627712|ref|YP_001701361.1| hypothetical protein MAB_0609c [Mycobacterium abscessus ATCC
19977]
gi|169239679|emb|CAM60707.1| Conserved hypothetical protein [Mycobacterium abscessus]
Length=162
Score = 162 bits (410), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 81/155 (53%), Positives = 106/155 (69%), Gaps = 8/155 (5%)
Query 4 SPPRFLNSPLSDFFIKWMSRINTWMYRRNDGEGLGGTFQ-------KIPVALLTTTGRKT 56
+ P LNS + IKWM+ +N W+Y+R DG LGG ++ IPV LLTTTGRKT
Sbjct 9 NAPAQLNSEFAGKVIKWMTTVNVWLYQRTDGR-LGGKWRVGAAFPWGIPVLLLTTTGRKT 67
Query 57 GQPRVNPLYFLRDGGRVIVAASKGGAEKNPMWYLNLKANPKVQVQIKKEVLDLTARDATD 116
GQ R++ L +L DG +V++ AS+GG NP WYLNLKAN +V VQIK ++ +TAR ATD
Sbjct 68 GQQRLSALLYLPDGDKVVLVASQGGRASNPAWYLNLKANSEVTVQIKGDIRTMTARTATD 127
Query 117 EERAEYWPQLVTMYPSYQDYQSWTDRTIPIVVCEP 151
ERA YWP+LV +Y + YQS+T R IP+V+ EP
Sbjct 128 AERAYYWPKLVELYADFDKYQSYTTRQIPVVILEP 162
>gi|343928246|ref|ZP_08767700.1| hypothetical protein GOALK_111_00150 [Gordonia alkanivorans NBRC
16433]
gi|343761840|dbj|GAA14626.1| hypothetical protein GOALK_111_00150 [Gordonia alkanivorans NBRC
16433]
Length=164
Score = 162 bits (410), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 81/157 (52%), Positives = 105/157 (67%), Gaps = 8/157 (5%)
Query 2 PKSPPRFLNSPLSDFFIKWMSRINTWMYRRNDGEGLGGTF-------QKIPVALLTTTGR 54
P P L+SP+ IK SRINT +Y+ G +GGT+ + PV LLTT GR
Sbjct 6 PDKKPAQLDSPIVGTLIKVGSRINTRLYKATGGR-IGGTWRVGAGLKKPAPVCLLTTIGR 64
Query 55 KTGQPRVNPLYFLRDGGRVIVAASKGGAEKNPMWYLNLKANPKVQVQIKKEVLDLTARDA 114
K+G+PR PL +LR G + +V AS+GG+ K+P WYLNL+ NP V VQ+ KE DLTAR A
Sbjct 65 KSGEPRTVPLVYLRRGDQFVVVASQGGSAKHPAWYLNLRDNPSVTVQLGKETFDLTARTA 124
Query 115 TDEERAEYWPQLVTMYPSYQDYQSWTDRTIPIVVCEP 151
T+ ERAE WP+LV +Y + Y +WTDRTIP+V+CEP
Sbjct 125 TEAERAEVWPELVEVYADFDTYVAWTDRTIPVVICEP 161
>gi|145222097|ref|YP_001132775.1| hypothetical protein Mflv_1505 [Mycobacterium gilvum PYR-GCK]
gi|145214583|gb|ABP43987.1| conserved hypothetical protein [Mycobacterium gilvum PYR-GCK]
Length=166
Score = 162 bits (409), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 78/151 (52%), Positives = 105/151 (70%), Gaps = 9/151 (5%)
Query 9 LNSPLSDFFIKWMSRINTWMYRRNDGEGLGGTFQKI--------PVALLTTTGRKTGQPR 60
LNS IKWMS++NTW Y+ G LG ++ PV +LTT GRK+G+PR
Sbjct 16 LNSNAVGTGIKWMSKLNTWAYKATGGR-LGAKWRGGSNRFSAPPPVGILTTIGRKSGEPR 74
Query 61 VNPLYFLRDGGRVIVAASKGGAEKNPMWYLNLKANPKVQVQIKKEVLDLTARDATDEERA 120
+PL FLR+G R+++ AS+GG NPMWYLN++ANPKV Q+K E L L ARDATD ER
Sbjct 75 ESPLLFLREGDRIVLVASQGGRATNPMWYLNIQANPKVTFQVKNEKLTLVARDATDAERD 134
Query 121 EYWPQLVTMYPSYQDYQSWTDRTIPIVVCEP 151
EYWP+L +YP + +Y+++TDR IPI++C+P
Sbjct 135 EYWPKLDAIYPDFVNYRTYTDRKIPILICDP 165
>gi|342862375|ref|ZP_08719015.1| AclJ protein [Mycobacterium colombiense CECT 3035]
gi|342130046|gb|EGT83380.1| AclJ protein [Mycobacterium colombiense CECT 3035]
Length=150
Score = 161 bits (408), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 75/142 (53%), Positives = 100/142 (71%), Gaps = 1/142 (0%)
Query 10 NSPLSDFFIKWMSRINTWMYRRNDGEGLGGTFQKIPVALLTTTGRKTGQPRVNPLYFLRD 69
NS +K+ +R + W+YRR +G+ +G + P ALLTTTGRK+ +PR +LRD
Sbjct 9 NSRPIALLLKYFARAHIWVYRRTNGK-VGAKLLRFPAALLTTTGRKSDEPRTTATLYLRD 67
Query 70 GGRVIVAASKGGAEKNPMWYLNLKANPKVQVQIKKEVLDLTARDATDEERAEYWPQLVTM 129
G RVI+ AS GG +++P+WYLNLK NP V+VQI+ + LDL ARDATD ER YWP+L M
Sbjct 68 GDRVILPASFGGRDEDPLWYLNLKENPDVRVQIRAQRLDLVARDATDAERERYWPRLTRM 127
Query 130 YPSYQDYQSWTDRTIPIVVCEP 151
YP+Y+ Y+ DR IP+VVCEP
Sbjct 128 YPAYRKYRETADRVIPLVVCEP 149
>gi|315446161|ref|YP_004079040.1| hypothetical protein Mspyr1_46620 [Mycobacterium sp. Spyr1]
gi|315264464|gb|ADU01206.1| conserved hypothetical protein TIGR00026 [Mycobacterium sp. Spyr1]
Length=166
Score = 160 bits (405), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 77/151 (51%), Positives = 104/151 (69%), Gaps = 9/151 (5%)
Query 9 LNSPLSDFFIKWMSRINTWMYRRNDGEGLGGTFQKI--------PVALLTTTGRKTGQPR 60
LNS IKWMS+ NTW Y+ G LG ++ PV +LTT GRK+G+PR
Sbjct 16 LNSKAVGTGIKWMSKFNTWAYKATGGR-LGAKWRGGSNRFSAPPPVGILTTIGRKSGEPR 74
Query 61 VNPLYFLRDGGRVIVAASKGGAEKNPMWYLNLKANPKVQVQIKKEVLDLTARDATDEERA 120
+PL FLR+G R+++ AS+GG NPMWYLN++ANP+V Q+K E L L ARDATD ER
Sbjct 75 ESPLLFLREGDRIVLVASQGGRATNPMWYLNIQANPQVTFQVKNEKLTLVARDATDAERD 134
Query 121 EYWPQLVTMYPSYQDYQSWTDRTIPIVVCEP 151
EYWP+L +YP + +Y+++TDR IPI++C+P
Sbjct 135 EYWPKLDAIYPDFVNYRTYTDRKIPILICDP 165
>gi|296166579|ref|ZP_06849009.1| AclJ protein [Mycobacterium parascrofulaceum ATCC BAA-614]
gi|295898065|gb|EFG77641.1| AclJ protein [Mycobacterium parascrofulaceum ATCC BAA-614]
Length=158
Score = 159 bits (403), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 74/149 (50%), Positives = 101/149 (68%), Gaps = 1/149 (0%)
Query 3 KSPPRFLNSPLSDFFIKWMSRINTWMYRRNDGEGLGGTFQKIPVALLTTTGRKTGQPRVN 62
K P NS +K+ +R + W+YRR DG +G + P AL+TTTGRK+ QPR
Sbjct 7 KMPNWIRNSRPIALLLKYFARAHIWVYRRTDGR-IGAKLLRFPAALITTTGRKSDQPRTT 65
Query 63 PLYFLRDGGRVIVAASKGGAEKNPMWYLNLKANPKVQVQIKKEVLDLTARDATDEERAEY 122
+LRDG RVI+ AS GG +++P+WYLN++ NP+VQVQ++ + + + ARDATD ER Y
Sbjct 66 ATLYLRDGDRVILPASFGGRDEHPLWYLNVQENPEVQVQVRAQRMRMVARDATDAERDRY 125
Query 123 WPQLVTMYPSYQDYQSWTDRTIPIVVCEP 151
WP L+ MYP Y+ Y+ TDR IP+VVCEP
Sbjct 126 WPSLIRMYPPYRKYREVTDRVIPLVVCEP 154
>gi|254822630|ref|ZP_05227631.1| hypothetical protein MintA_22064 [Mycobacterium intracellulare
ATCC 13950]
Length=165
Score = 155 bits (393), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 72/142 (51%), Positives = 99/142 (70%), Gaps = 1/142 (0%)
Query 10 NSPLSDFFIKWMSRINTWMYRRNDGEGLGGTFQKIPVALLTTTGRKTGQPRVNPLYFLRD 69
NS +K+ +R++ W+YRR +G +G + P ALLTTTGRK+ +PR +LRD
Sbjct 9 NSRPIALLLKYFARLHIWVYRRTNGR-IGAKLLRFPAALLTTTGRKSNRPRTTATLYLRD 67
Query 70 GGRVIVAASKGGAEKNPMWYLNLKANPKVQVQIKKEVLDLTARDATDEERAEYWPQLVTM 129
G RVI+ AS G +++P+WYLNL+ NP+V+VQI+ + L+L ARDATD ER YWP L+ M
Sbjct 68 GERVILPASFDGRDEDPVWYLNLRENPEVRVQIRAQRLELIARDATDAERERYWPPLMRM 127
Query 130 YPSYQDYQSWTDRTIPIVVCEP 151
YP Y+ Y+ DR IP+VVCEP
Sbjct 128 YPPYRKYREAADRVIPLVVCEP 149
>gi|262203831|ref|YP_003275039.1| hypothetical protein Gbro_3972 [Gordonia bronchialis DSM 43247]
gi|262087178|gb|ACY23146.1| hypothetical protein Gbro_3972 [Gordonia bronchialis DSM 43247]
Length=169
Score = 155 bits (391), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 78/162 (49%), Positives = 105/162 (65%), Gaps = 13/162 (8%)
Query 2 PKSPPRFLNSPLSDFFIKWMSRINTWMYRRNDGEGLGGTFQ-------KIPVALLTTTGR 54
P++ P L+SP+ IKW SR NT +Y+ G LGGT++ +PVALLTT GR
Sbjct 8 PENRPAQLDSPVVAALIKWGSRANTALYKATGGR-LGGTWRVGAAARNPVPVALLTTIGR 66
Query 55 KTGQPRVNPLYFLRDGGRVIVAASKGGAEKNPMWYLNLKANPKVQVQIKKEVLDLTARDA 114
K+G+PR PL +LR G +V AS+GG+ +P WYLNL+ NP V +Q+ K+ +L AR A
Sbjct 67 KSGKPRTAPLLYLRRGDDFVVVASQGGSATHPAWYLNLRDNPDVSIQVGKDTYELRARTA 126
Query 115 TDEERAEYWPQLVTMYPSYQDYQSWTD-----RTIPIVVCEP 151
TD ERA+ WP+LV YP + Y +WTD R IP+V+CEP
Sbjct 127 TDSERAQIWPELVDHYPDFDTYAAWTDQGPTKRIIPVVICEP 168
>gi|254823479|ref|ZP_05228480.1| hypothetical protein MintA_26353 [Mycobacterium intracellulare
ATCC 13950]
Length=161
Score = 144 bits (364), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 70/149 (47%), Positives = 96/149 (65%), Gaps = 2/149 (1%)
Query 3 KSPPRFLNSPLSDFFIKWMSRINTWMYRRNDGEGLGGTFQKIPVALLTTTGRKTGQPRVN 62
K PP L S L+ +KW+S+ N +YR DG L G + + LLTTTGRK+G R
Sbjct 14 KRPP-VLISVLAPRLLKWVSKANVAIYRATDGR-LAGHELGLALCLLTTTGRKSGLSRTT 71
Query 63 PLYFLRDGGRVIVAASKGGAEKNPMWYLNLKANPKVQVQIKKEVLDLTARDATDEERAEY 122
PL F+ D R+++ AS+GG +PMW+LNL+ANP V+VQI+ + + AR A + ER +
Sbjct 72 PLIFMADDARLVLVASQGGLPTHPMWFLNLRANPDVRVQIRAQTRSMRARVADETERTQL 131
Query 123 WPQLVTMYPSYQDYQSWTDRTIPIVVCEP 151
WP+L P + YQSWTDR IP+V+CEP
Sbjct 132 WPRLTAHNPRWARYQSWTDRVIPVVICEP 160
>gi|326383127|ref|ZP_08204816.1| hypothetical protein SCNU_09321 [Gordonia neofelifaecis NRRL
B-59395]
gi|326198263|gb|EGD55448.1| hypothetical protein SCNU_09321 [Gordonia neofelifaecis NRRL
B-59395]
Length=159
Score = 144 bits (363), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 75/153 (50%), Positives = 97/153 (64%), Gaps = 8/153 (5%)
Query 6 PRFLNSPLSDFFIKWMSRINTWMYRRNDGEGLGGTF-------QKIPVALLTTTGRKTGQ 58
P L+SP+ FIK SR+NT +YR G+ LGGT+ + PV LLTT GRK+GQ
Sbjct 7 PAQLDSPVVARFIKIGSRLNTRLYRLTRGK-LGGTWRVGAALRKPTPVCLLTTVGRKSGQ 65
Query 59 PRVNPLYFLRDGGRVIVAASKGGAEKNPMWYLNLKANPKVQVQIKKEVLDLTARDATDEE 118
R PL +LRDG +++ AS+GG KNP WY N++ P V +QI + AR A D E
Sbjct 66 KRTVPLLYLRDGQAIVLVASQGGLPKNPSWYYNVRDEPAVSIQIGGDDRAYVARIAGDAE 125
Query 119 RAEYWPQLVTMYPSYQDYQSWTDRTIPIVVCEP 151
RAE WP+LV +Y + Y +WTDR IP+VVCEP
Sbjct 126 RAELWPRLVDLYADFDTYAAWTDRAIPVVVCEP 158
>gi|269127186|ref|YP_003300556.1| hypothetical protein Tcur_2976 [Thermomonospora curvata DSM 43183]
gi|268312144|gb|ACY98518.1| hypothetical protein Tcur_2976 [Thermomonospora curvata DSM 43183]
Length=163
Score = 135 bits (339), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 69/157 (44%), Positives = 97/157 (62%), Gaps = 9/157 (5%)
Query 3 KSPPRFLNSPLSDFFIKWMSRINTWMYRRNDGEGLGGTFQ-------KIPVALLTTTGRK 55
K PR +SP F+K M + + +YR G +G F +PV L TT GRK
Sbjct 7 KPRPRAYDSPWMPKFMKVMGKTHVAVYRATGGL-IGRRFHVGSAWLRGVPVCLFTTIGRK 65
Query 56 TGQPRVNPLYFLRDGGRVIVAASKGGAEKNPMWYLNLKANPKVQVQIKKEVLDLTARDAT 115
+G PR PL ++RDG R++V AS+GG +P WYLNL+ANP+V VQI ++ + AR A
Sbjct 66 SGLPRTMPLLYMRDGERIVVVASQGGLPGHPQWYLNLRANPEVVVQIGRKKRRMRARTAD 125
Query 116 DEERAEYWPQLVTMYPSYQDYQSWT-DRTIPIVVCEP 151
+ ERA+ WP+L+ +Y + +YQ W DR IP+V+CEP
Sbjct 126 EAERAQLWPRLLKIYADFDNYQRWAGDRVIPVVICEP 162
>gi|108797033|ref|YP_637230.1| hypothetical protein Mmcs_0052 [Mycobacterium sp. MCS]
gi|119866118|ref|YP_936070.1| hypothetical protein Mkms_0061 [Mycobacterium sp. KMS]
gi|108767452|gb|ABG06174.1| hypothetical protein Mmcs_0052 [Mycobacterium sp. MCS]
gi|119692207|gb|ABL89280.1| Mycobacterium tuberculosis paralogous family 11 [Mycobacterium
sp. KMS]
Length=159
Score = 124 bits (312), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 64/152 (43%), Positives = 91/152 (60%), Gaps = 6/152 (3%)
Query 6 PRFLNSPLSDFFIKWMSRINTWMYRRNDGE-----GLGGTFQK-IPVALLTTTGRKTGQP 59
P+ L+SPL K++ + + W+YRR G +G F+K +P LL GRKTG+
Sbjct 7 PKQLDSPLLPKIFKYVGKAHVWVYRRTGGRIGGKWRVGAGFRKPVPTMLLEHRGRKTGKV 66
Query 60 RVNPLYFLRDGGRVIVAASKGGAEKNPMWYLNLKANPKVQVQIKKEVLDLTARDATDEER 119
V PL +LRDG V++ AS+GG +++P WY NL A P V +I E + A A E+R
Sbjct 67 FVTPLLYLRDGADVVIVASQGGRKEHPQWYRNLIAGPDVFAEIGSERRPVKAVVADAEQR 126
Query 120 AEYWPQLVTMYPSYQDYQSWTDRTIPIVVCEP 151
A WP LV +Y + YQSWT+R IP+V+ +P
Sbjct 127 ARLWPALVELYADFDTYQSWTEREIPVVILQP 158
>gi|126432655|ref|YP_001068346.1| hypothetical protein Mjls_0042 [Mycobacterium sp. JLS]
gi|126232455|gb|ABN95855.1| conserved hypothetical protein [Mycobacterium sp. JLS]
Length=159
Score = 123 bits (309), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 62/152 (41%), Positives = 91/152 (60%), Gaps = 6/152 (3%)
Query 6 PRFLNSPLSDFFIKWMSRINTWMYRRNDGE-----GLGGTFQK-IPVALLTTTGRKTGQP 59
P+ L+SPL K++ + + W+YRR G +G F+K +P LL GRK+G+
Sbjct 7 PKQLDSPLLPTIFKYVGKAHVWVYRRTGGRIGGKWRVGAGFRKPVPTMLLEHRGRKSGKV 66
Query 60 RVNPLYFLRDGGRVIVAASKGGAEKNPMWYLNLKANPKVQVQIKKEVLDLTARDATDEER 119
V PL +LRDG V++ AS+GG +++P WY NL A P V +I E + A A E+R
Sbjct 67 FVTPLLYLRDGADVVIVASQGGRKEHPQWYRNLIAGPDVFAEIGSERRPVKAVVADAEQR 126
Query 120 AEYWPQLVTMYPSYQDYQSWTDRTIPIVVCEP 151
A WP LV +Y + YQSWT+R IP+++ +P
Sbjct 127 ARLWPALVELYADFDTYQSWTEREIPVIILQP 158
>gi|302526918|ref|ZP_07279260.1| conserved hypothetical protein [Streptomyces sp. AA4]
gi|302435813|gb|EFL07629.1| conserved hypothetical protein [Streptomyces sp. AA4]
Length=164
Score = 120 bits (301), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 59/158 (38%), Positives = 97/158 (62%), Gaps = 7/158 (4%)
Query 1 MPKSPPRFLNSPLSDFFIKWMSRINTWMYRRNDGE-----GLGGTFQK-IPVALLTTTGR 54
+P P+ L+SP++ +K+++RI ++ +G +G F+K +P LL GR
Sbjct 6 LPAEAPKGLDSPVTAALMKYLARIQVKVFTLTNGRIGHKWRVGAGFRKPVPTLLLEHRGR 65
Query 55 KTGQPRVNPLYFLRDGGRVIVAASKGGAEKNPMWYLNLKANPKVQVQIK-KEVLDLTARD 113
K+G+ PL +LR G +++ AS+GG K+P WY NL+A P+ +V ++ + + +TAR
Sbjct 66 KSGRLFTTPLLYLRSGDDLVIVASQGGLPKHPQWYFNLRAEPETRVHLRGRRNVPVTARV 125
Query 114 ATDEERAEYWPQLVTMYPSYQDYQSWTDRTIPIVVCEP 151
A+ +ER E WP+LV +Y + YQ WT+R IP+VV P
Sbjct 126 ASADERRELWPRLVELYADFAKYQKWTEREIPVVVLTP 163
>gi|158317142|ref|YP_001509650.1| hypothetical protein Franean1_5388 [Frankia sp. EAN1pec]
gi|158112547|gb|ABW14744.1| conserved hypothetical protein [Frankia sp. EAN1pec]
Length=144
Score = 116 bits (291), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 55/123 (45%), Positives = 81/123 (66%), Gaps = 1/123 (0%)
Query 29 YRRNDGEGLGGTFQKIPVALLTTTGRKTGQPRVNPLYFLRDGGRVIVAASKGGAEKNPMW 88
YR DGE +G + +P+ LLTTTGR+TG+ R PL F RD +V AS GG+ ++P W
Sbjct 22 YRETDGE-VGYLWNTVPILLLTTTGRRTGEARTTPLIFGRDDDDYLVIASTGGSPRHPAW 80
Query 89 YLNLKANPKVQVQIKKEVLDLTARDATDEERAEYWPQLVTMYPSYQDYQSWTDRTIPIVV 148
YLNL ANP+ ++QI+ + + +T R AT++E+ W + ++P+Y YQ T+R IP+VV
Sbjct 81 YLNLTANPRAEIQIRADHIAVTTRTATEQEKPRLWRIMADIWPNYNVYQRRTERVIPVVV 140
Query 149 CEP 151
P
Sbjct 141 LTP 143
>gi|340525834|gb|AEK41039.1| hypothetical protein RAM_12745 [Amycolatopsis mediterranei S699]
Length=165
Score = 113 bits (283), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 57/158 (37%), Positives = 93/158 (59%), Gaps = 7/158 (4%)
Query 1 MPKSPPRFLNSPLSDFFIKWMSRINTWMYRRNDGE-----GLGGTFQK-IPVALLTTTGR 54
+P+ P L+SP++ +K+ ++ ++R G +G F+K +P LL GR
Sbjct 6 LPEQKPGGLDSPVTAKVLKYAAKAQVAVFRLTGGRIGSTWRIGAGFRKPVPTLLLEHRGR 65
Query 55 KTGQPRVNPLYFLRDGGRVIVAASKGGAEKNPMWYLNLKANPKVQVQIK-KEVLDLTARD 113
K+G+ PL +LR G ++ S+GG ++P WY NL A+P+ ++ +K + + +TAR
Sbjct 66 KSGRLFTTPLLYLRSGADFVIVGSQGGLPRHPQWYFNLLAHPETRIDLKGRRGVPVTARV 125
Query 114 ATDEERAEYWPQLVTMYPSYQDYQSWTDRTIPIVVCEP 151
A ERAE WP+LV +Y + YQ+WT+R IP+VV P
Sbjct 126 AEPPERAELWPRLVELYADFAKYQAWTEREIPVVVLSP 163
>gi|300784413|ref|YP_003764704.1| hypothetical protein AMED_2507 [Amycolatopsis mediterranei U32]
gi|299793927|gb|ADJ44302.1| conserved hypothetical protein [Amycolatopsis mediterranei U32]
Length=166
Score = 113 bits (282), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 57/158 (37%), Positives = 93/158 (59%), Gaps = 7/158 (4%)
Query 1 MPKSPPRFLNSPLSDFFIKWMSRINTWMYRRNDGE-----GLGGTFQK-IPVALLTTTGR 54
+P+ P L+SP++ +K+ ++ ++R G +G F+K +P LL GR
Sbjct 7 LPEQKPGGLDSPVTAKVLKYAAKAQVAVFRLTGGRIGSTWRIGAGFRKPVPTLLLEHRGR 66
Query 55 KTGQPRVNPLYFLRDGGRVIVAASKGGAEKNPMWYLNLKANPKVQVQIK-KEVLDLTARD 113
K+G+ PL +LR G ++ S+GG ++P WY NL A+P+ ++ +K + + +TAR
Sbjct 67 KSGRLFTTPLLYLRSGADFVIVGSQGGLPRHPQWYFNLLAHPETRIDLKGRRGVPVTARV 126
Query 114 ATDEERAEYWPQLVTMYPSYQDYQSWTDRTIPIVVCEP 151
A ERAE WP+LV +Y + YQ+WT+R IP+VV P
Sbjct 127 AEPPERAELWPRLVELYADFAKYQAWTEREIPVVVLSP 164
>gi|302529146|ref|ZP_07281488.1| proline iminopeptidase [Streptomyces sp. AA4]
gi|302438041|gb|EFL09857.1| proline iminopeptidase [Streptomyces sp. AA4]
Length=472
Score = 113 bits (282), Expect = 1e-23, Method: Composition-based stats.
Identities = 59/123 (48%), Positives = 79/123 (65%), Gaps = 2/123 (1%)
Query 29 YRRNDGEGLGGTFQK-IPVALLTTTGRKTGQPRVNPLYFLRDGGRVIVAASKGGAEKNPM 87
Y DG+ +G +Q+ +P +LTT GRKTGQ R L + D G ++ ASKGGA +P
Sbjct 349 YEETDGK-VGHDWQEGVPTLVLTTKGRKTGQDRKFALIYQEDNGNPVIVASKGGAPNHPG 407
Query 88 WYLNLKANPKVQVQIKKEVLDLTARDATDEERAEYWPQLVTMYPSYQDYQSWTDRTIPIV 147
WYLNL+ NP+V+VQ+ + AR AT EERA W +L ++P+Y DYQ TDR IP+V
Sbjct 408 WYLNLQENPEVRVQVWGDKFTARARTATGEERARLWDKLAAVWPAYNDYQKKTDREIPVV 467
Query 148 VCE 150
V E
Sbjct 468 VLE 470
>gi|16945722|dbj|BAB72053.1| AclJ [Streptomyces galilaeus]
Length=156
Score = 112 bits (279), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 56/123 (46%), Positives = 79/123 (65%), Gaps = 1/123 (0%)
Query 29 YRRNDGEGLGGTFQKIPVALLTTTGRKTGQPRVNPLYFLRDGGRVIVAASKGGAEKNPMW 88
Y R+ G+ G + + LLTT GRK+G+ R + + RDGG +IV S GG ++P+W
Sbjct 32 YDRSGGK-EGQKWYGLDTLLLTTRGRKSGRLRRTAVIYGRDGGNIIVVGSNGGKPEHPLW 90
Query 89 YLNLKANPKVQVQIKKEVLDLTARDATDEERAEYWPQLVTMYPSYQDYQSWTDRTIPIVV 148
YLNL A+P+ VQI +E LD+ AR AT EE+ E W + ++P Y+ YQ TDR IP+V+
Sbjct 91 YLNLVASPEAHVQIGEEHLDVRARTATAEEKPELWKLMTGLFPQYKSYQKKTDREIPVVI 150
Query 149 CEP 151
EP
Sbjct 151 LEP 153
>gi|312198241|ref|YP_004018302.1| hypothetical protein FraEuI1c_4438 [Frankia sp. EuI1c]
gi|311229577|gb|ADP82432.1| hypothetical protein FraEuI1c_4438 [Frankia sp. EuI1c]
Length=144
Score = 112 bits (279), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 55/123 (45%), Positives = 78/123 (64%), Gaps = 1/123 (0%)
Query 29 YRRNDGEGLGGTFQKIPVALLTTTGRKTGQPRVNPLYFLRDGGRVIVAASKGGAEKNPMW 88
Y+ DGE +G + +P LLTT GR+TG R L F RDG +V AS GG+ ++P W
Sbjct 22 YQDTDGE-VGYLWNGVPTLLLTTVGRRTGARRTTALIFARDGDDYLVVASTGGSPRDPDW 80
Query 89 YLNLKANPKVQVQIKKEVLDLTARDATDEERAEYWPQLVTMYPSYQDYQSWTDRTIPIVV 148
YLNL ANP V++Q++ + L + AR A+D+E+ W + ++P+Y YQS T R IP+VV
Sbjct 81 YLNLSANPAVEIQVRAQHLQVVARTASDDEKPRLWKIVTDVWPNYDLYQSRTTRRIPVVV 140
Query 149 CEP 151
P
Sbjct 141 LSP 143
>gi|257055151|ref|YP_003132983.1| hypothetical protein Svir_11000 [Saccharomonospora viridis DSM
43017]
gi|256585023|gb|ACU96156.1| conserved hypothetical protein TIGR00026 [Saccharomonospora viridis
DSM 43017]
Length=138
Score = 111 bits (278), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 56/123 (46%), Positives = 77/123 (63%), Gaps = 1/123 (0%)
Query 29 YRRNDGEGLGGTFQKIPVALLTTTGRKTGQPRVNPLYFLRDGGRVIVAASKGGAEKNPMW 88
Y ++DGE LG P+ +LTTTGRKTG+PR L F G +V AS GGA +P W
Sbjct 15 YEKSDGE-LGYLRHGAPILILTTTGRKTGRPRKVALIFQEHEGCYVVVASNGGAADHPDW 73
Query 89 YLNLKANPKVQVQIKKEVLDLTARDATDEERAEYWPQLVTMYPSYQDYQSWTDRTIPIVV 148
Y NL+ +P+V+VQ+K + AR AT EER W + ++P+Y +Y+ T+R IP+VV
Sbjct 74 YKNLRVDPEVRVQVKADRFAARARTATGEERERLWRIMAAVFPTYDEYRRRTEREIPVVV 133
Query 149 CEP 151
EP
Sbjct 134 LEP 136
>gi|229490334|ref|ZP_04384175.1| conserved hypothetical protein [Rhodococcus erythropolis SK121]
gi|229322624|gb|EEN88404.1| conserved hypothetical protein [Rhodococcus erythropolis SK121]
Length=144
Score = 111 bits (278), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 55/121 (46%), Positives = 73/121 (61%), Gaps = 0/121 (0%)
Query 31 RNDGEGLGGTFQKIPVALLTTTGRKTGQPRVNPLYFLRDGGRVIVAASKGGAEKNPMWYL 90
N G G +PV +LTT G K+G+ R PL + G V AS GGA KNP+WY
Sbjct 23 ENSGGTEGNDMNGMPVVVLTTIGAKSGKVRKTPLMRVEHDGSYAVVASLGGAPKNPVWYY 82
Query 91 NLKANPKVQVQIKKEVLDLTARDATDEERAEYWPQLVTMYPSYQDYQSWTDRTIPIVVCE 150
N+KA+P V ++ +V DL AR+ T +E+A +W + V YP Y DYQ+ TDR IP+ V E
Sbjct 83 NVKADPHVTLRDATQVFDLVAREVTGDEKAVWWERAVAAYPDYADYQTKTDREIPVFVLE 142
Query 151 P 151
P
Sbjct 143 P 143
>gi|226307016|ref|YP_002766976.1| hypothetical protein RER_35290 [Rhodococcus erythropolis PR4]
gi|226186133|dbj|BAH34237.1| conserved hypothetical protein [Rhodococcus erythropolis PR4]
Length=144
Score = 111 bits (278), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 55/121 (46%), Positives = 73/121 (61%), Gaps = 0/121 (0%)
Query 31 RNDGEGLGGTFQKIPVALLTTTGRKTGQPRVNPLYFLRDGGRVIVAASKGGAEKNPMWYL 90
N G G +PV +LTT G K+G+ R PL + G V AS GGA KNP+WY
Sbjct 23 ENSGGTEGNDMNGMPVVVLTTVGAKSGKVRKTPLMRVEHDGSYAVVASLGGAPKNPVWYY 82
Query 91 NLKANPKVQVQIKKEVLDLTARDATDEERAEYWPQLVTMYPSYQDYQSWTDRTIPIVVCE 150
N+KA+P V ++ +V DL AR+ T +E+A +W + V YP Y DYQ+ TDR IP+ V E
Sbjct 83 NVKADPHVTLRDATQVFDLVAREVTGDEKAIWWERAVAAYPDYADYQTKTDREIPVFVLE 142
Query 151 P 151
P
Sbjct 143 P 143
>gi|288920589|ref|ZP_06414894.1| hypothetical protein FrEUN1fDRAFT_4592 [Frankia sp. EUN1f]
gi|288348010|gb|EFC82282.1| hypothetical protein FrEUN1fDRAFT_4592 [Frankia sp. EUN1f]
Length=144
Score = 111 bits (277), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 55/123 (45%), Positives = 78/123 (64%), Gaps = 1/123 (0%)
Query 29 YRRNDGEGLGGTFQKIPVALLTTTGRKTGQPRVNPLYFLRDGGRVIVAASKGGAEKNPMW 88
YR GE +G + + LLTTTGR++GQPR + L F RDG +V ASKGGA ++P W
Sbjct 22 YRETGGE-VGYEWNGVHTLLLTTTGRRSGQPRTSALIFARDGDDYLVVASKGGAPEHPEW 80
Query 89 YLNLKANPKVQVQIKKEVLDLTARDATDEERAEYWPQLVTMYPSYQDYQSWTDRTIPIVV 148
Y NL ANP ++Q++ E + A A+D E+A W + ++P+Y YQ+ T+R IP+VV
Sbjct 81 YRNLLANPAAEIQVQAERFTVRAATASDAEKARLWEIVTKVWPNYDAYQTRTERPIPVVV 140
Query 149 CEP 151
P
Sbjct 141 LSP 143
>gi|269126740|ref|YP_003300110.1| hypothetical protein Tcur_2511 [Thermomonospora curvata DSM 43183]
gi|268311698|gb|ACY98072.1| hypothetical protein Tcur_2511 [Thermomonospora curvata DSM 43183]
Length=134
Score = 110 bits (276), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 57/123 (47%), Positives = 77/123 (63%), Gaps = 2/123 (1%)
Query 29 YRRNDGEGLGGTFQK-IPVALLTTTGRKTGQPRVNPLYFLRDGGRVIVAASKGGAEKNPM 87
Y DG +G ++K PV +LTT GRK+GQ R PL + G +V ASKGGA +P
Sbjct 11 YEETDG-AVGHDWEKGAPVLILTTKGRKSGQERKCPLIYQEHQGNYVVVASKGGAPDHPH 69
Query 88 WYLNLKANPKVQVQIKKEVLDLTARDATDEERAEYWPQLVTMYPSYQDYQSWTDRTIPIV 147
WYLNL+A+P+V+VQ+K + AR A ER E W ++ ++P Y +YQ TDR IP+V
Sbjct 70 WYLNLQADPEVRVQVKADKFTARARTAEGAERDELWAKMAAVWPDYDEYQKKTDRQIPVV 129
Query 148 VCE 150
V E
Sbjct 130 VLE 132
>gi|300784815|ref|YP_003765106.1| hypothetical protein AMED_2910 [Amycolatopsis mediterranei U32]
gi|299794329|gb|ADJ44704.1| conserved hypothetical protein [Amycolatopsis mediterranei U32]
gi|340526241|gb|AEK41446.1| hypothetical protein RAM_14790 [Amycolatopsis mediterranei S699]
Length=156
Score = 110 bits (276), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 58/154 (38%), Positives = 91/154 (60%), Gaps = 8/154 (5%)
Query 1 MPKSPPRFLNSPLSDF--FIKWMSRINTWMYRRNDGEGLGGTFQKIPVALLTTTGRKTGQ 58
MPK+P +P S + + ++R+NT+++R+ G+ G F PV LL GRK+G+
Sbjct 1 MPKAP-----APTSRYWKLQRQLTRLNTFLFRKTGGKVGGSYFGGAPVLLLHHVGRKSGE 55
Query 59 PRVNPLYFLRDGGRVIVAASKGGAEKNPMWYLNLKANPKVQVQI-KKEVLDLTARDATDE 117
R++PL +L D R++V ASKGG + +P W+ NL A +V++ E + A
Sbjct 56 ARISPLIYLDDAPRLVVVASKGGVDAHPAWFHNLTAMATTEVELPGGERRRVRPHVAEGA 115
Query 118 ERAEYWPQLVTMYPSYQDYQSWTDRTIPIVVCEP 151
ERA W + V +Y +Y Y ++T+RTIP+VV EP
Sbjct 116 ERARLWDRAVAIYKTYAAYATYTERTIPVVVLEP 149
>gi|254483121|ref|ZP_05096355.1| conserved domain protein [marine gamma proteobacterium HTCC2148]
gi|214036643|gb|EEB77316.1| conserved domain protein [marine gamma proteobacterium HTCC2148]
Length=163
Score = 110 bits (276), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 54/139 (39%), Positives = 79/139 (57%), Gaps = 1/139 (0%)
Query 12 PLSDFFIKWMSRINTWMYRRNDGEGLGGTFQKIPVALLTTTGRKTGQPRVNPLYFLRDGG 71
P I+W SR ++R + G L TF PV ++T TG K+G+ R PL + G
Sbjct 23 PAIKLIIRWTSRFQAGVFRLSKGR-LMNTFLGGPVCMVTMTGAKSGKTRRLPLIHIPHGD 81
Query 72 RVIVAASKGGAEKNPMWYLNLKANPKVQVQIKKEVLDLTARDATDEERAEYWPQLVTMYP 131
++ AS GG KNP+WY N+KA P +++ + AR +DEE+A WP L+ +YP
Sbjct 82 SKLLVASSGGMPKNPVWYYNIKAYPDIRIMADGQDKTYRARQVSDEEKAALWPTLLAVYP 141
Query 132 SYQDYQSWTDRTIPIVVCE 150
+ +YQ+ TDR IP+ CE
Sbjct 142 DFDEYQARTDRNIPVFSCE 160
>gi|288920153|ref|ZP_06414470.1| hypothetical protein FrEUN1fDRAFT_4168 [Frankia sp. EUN1f]
gi|288348484|gb|EFC82744.1| hypothetical protein FrEUN1fDRAFT_4168 [Frankia sp. EUN1f]
Length=144
Score = 110 bits (275), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 54/123 (44%), Positives = 75/123 (61%), Gaps = 1/123 (0%)
Query 29 YRRNDGEGLGGTFQKIPVALLTTTGRKTGQPRVNPLYFLRDGGRVIVAASKGGAEKNPMW 88
YR GE +G + +P LLTT GR++GQPR + L F RDG +V ASKGG+ P W
Sbjct 22 YRETGGE-VGYEWNGVPTLLLTTVGRRSGQPRTSALIFGRDGADYLVVASKGGSPAAPQW 80
Query 89 YLNLKANPKVQVQIKKEVLDLTARDATDEERAEYWPQLVTMYPSYQDYQSWTDRTIPIVV 148
YLNL ++Q++ E L + AR A+DEE+ W + ++P+Y YQ+ T R IP+VV
Sbjct 81 YLNLTDQSAAEIQVRAEHLSVVARTASDEEKPRLWKIMTEVWPNYDAYQTRTSRPIPVVV 140
Query 149 CEP 151
P
Sbjct 141 LTP 143
Lambda K H
0.319 0.136 0.432
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 128896424032
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40