BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv3555c Length=289 Score E Sequences producing significant alignments: (Bits) Value gi|15610691|ref|NP_218072.1| hypothetical protein Rv3555c [Mycob... 570 8e-161 gi|306778437|ref|ZP_07416774.1| hypothetical protein TMBG_02090 ... 568 4e-160 gi|339299975|gb|AEJ52085.1| hypothetical protein CCDC5180_3248 [... 568 5e-160 gi|31794731|ref|NP_857224.1| hypothetical protein Mb3585c [Mycob... 566 2e-159 gi|340628519|ref|YP_004746971.1| hypothetical protein MCAN_35661... 565 3e-159 gi|289572207|ref|ZP_06452434.1| conserved hypothetical protein [... 565 4e-159 gi|254552662|ref|ZP_05143109.1| hypothetical protein Mtube_19820... 537 6e-151 gi|342862384|ref|ZP_08719024.1| hypothetical protein MCOL_25953 ... 409 3e-112 gi|333992348|ref|YP_004524962.1| hypothetical protein JDM601_370... 408 6e-112 gi|289752268|ref|ZP_06511646.1| conserved hypothetical protein [... 300 2e-79 gi|169628293|ref|YP_001701942.1| hypothetical protein MAB_1200 [... 298 7e-79 gi|169631239|ref|YP_001704888.1| hypothetical protein MAB_4161 [... 282 3e-74 gi|41407345|ref|NP_960181.1| hypothetical protein MAP1247 [Mycob... 280 1e-73 gi|118466228|ref|YP_882416.1| hypothetical protein MAV_3234 [Myc... 278 5e-73 gi|336457941|gb|EGO36931.1| Protein of unknown function (DUF559)... 278 1e-72 gi|108797588|ref|YP_637785.1| hypothetical protein Mmcs_0608 [My... 273 2e-71 gi|333991884|ref|YP_004524498.1| hypothetical protein JDM601_324... 270 3e-70 gi|118469317|ref|YP_889560.1| hypothetical protein MSMEG_5314 [M... 268 8e-70 gi|41406911|ref|NP_959747.1| hypothetical protein MAP0813c [Myco... 264 1e-68 gi|296164410|ref|ZP_06846985.1| conserved hypothetical protein [... 259 4e-67 gi|126432741|ref|YP_001068432.1| hypothetical protein Mjls_0128 ... 258 8e-67 gi|333989076|ref|YP_004521690.1| hypothetical protein JDM601_043... 258 8e-67 gi|108797118|ref|YP_637315.1| hypothetical protein Mmcs_0138 [My... 256 2e-66 gi|254773888|ref|ZP_05215404.1| hypothetical protein MaviaA2_043... 252 4e-65 gi|118462486|ref|YP_880262.1| hypothetical protein MAV_1002 [Myc... 251 8e-65 gi|336461246|gb|EGO40121.1| Protein of unknown function (DUF559)... 250 2e-64 gi|15610653|ref|NP_218034.1| hypothetical protein Rv3517 [Mycoba... 249 3e-64 gi|289445109|ref|ZP_06434853.1| conserved hypothetical protein [... 248 5e-64 gi|254823200|ref|ZP_05228201.1| hypothetical protein MintA_24944... 248 9e-64 gi|120405993|ref|YP_955822.1| hypothetical protein Mvan_5044 [My... 248 1e-63 gi|289755646|ref|ZP_06515024.1| conserved hypothetical protein [... 246 2e-63 gi|240172349|ref|ZP_04751008.1| hypothetical protein MkanA1_2374... 241 9e-62 gi|254773599|ref|ZP_05215115.1| hypothetical protein MaviaA2_028... 240 2e-61 gi|118471345|ref|YP_885284.1| hypothetical protein MSMEG_0881 [M... 239 3e-61 gi|118463860|ref|YP_879922.1| hypothetical protein MAV_0642 [Myc... 239 5e-61 gi|108797618|ref|YP_637815.1| hypothetical protein Mmcs_0638 [My... 238 6e-61 gi|118470374|ref|YP_890143.1| hypothetical protein MSMEG_5917 [M... 238 8e-61 gi|118468502|ref|YP_885317.1| hypothetical protein MSMEG_0914 [M... 237 2e-60 gi|126433242|ref|YP_001068933.1| hypothetical protein Mjls_0631 ... 236 2e-60 gi|289763695|ref|ZP_06523073.1| conserved hypothetical protein [... 232 5e-59 gi|296170707|ref|ZP_06852282.1| conserved hypothetical protein [... 230 2e-58 gi|118468415|ref|YP_885190.1| hypothetical protein MSMEG_0785 [M... 230 2e-58 gi|289572169|ref|ZP_06452396.1| conserved hypothetical protein [... 230 2e-58 gi|183984625|ref|YP_001852916.1| hypothetical protein MMAR_4658 ... 229 3e-58 gi|41406626|ref|NP_959462.1| hypothetical protein MAP0528 [Mycob... 226 4e-57 gi|41406646|ref|NP_959482.1| hypothetical protein MAP0548c [Myco... 225 6e-57 gi|118467074|ref|YP_882533.1| hypothetical protein MAV_3351 [Myc... 224 1e-56 gi|240173343|ref|ZP_04752001.1| hypothetical protein MkanA1_2878... 224 1e-56 gi|108801239|ref|YP_641436.1| hypothetical protein Mmcs_4275 [My... 224 2e-56 gi|336458416|gb|EGO37390.1| hypothetical protein MAPs_13110 [Myc... 223 2e-56 >gi|15610691|ref|NP_218072.1| hypothetical protein Rv3555c [Mycobacterium tuberculosis H37Rv] gi|148663418|ref|YP_001284941.1| hypothetical protein MRA_3594 [Mycobacterium tuberculosis H37Ra] gi|148824761|ref|YP_001289515.1| hypothetical protein TBFG_13588 [Mycobacterium tuberculosis F11] 37 more sequence titles Length=289 Score = 570 bits (1469), Expect = 8e-161, Method: Compositional matrix adjust. Identities = 289/289 (100%), Positives = 289/289 (100%), Gaps = 0/289 (0%) Query 1 MDELPWPVLGSEVLAAKAIPERAMRQLYEPVYPGVYAPAGVELTARQRAHAAWLWSRRRA 60 MDELPWPVLGSEVLAAKAIPERAMRQLYEPVYPGVYAPAGVELTARQRAHAAWLWSRRRA Sbjct 1 MDELPWPVLGSEVLAAKAIPERAMRQLYEPVYPGVYAPAGVELTARQRAHAAWLWSRRRA 60 Query 61 VVAGNSAAALLGAKWVNPALDAELVHANRKPPPRIVVHTDRLAPHETVAVDGVAVTTPAR 120 VVAGNSAAALLGAKWVNPALDAELVHANRKPPPRIVVHTDRLAPHETVAVDGVAVTTPAR Sbjct 61 VVAGNSAAALLGAKWVNPALDAELVHANRKPPPRIVVHTDRLAPHETVAVDGVAVTTPAR 120 Query 121 TAFDIGRRTPSRLQAVQRLDALANSTDVKVADVQAVIAEHTGARGLVRLRAVLPLIDGGA 180 TAFDIGRRTPSRLQAVQRLDALANSTDVKVADVQAVIAEHTGARGLVRLRAVLPLIDGGA Sbjct 121 TAFDIGRRTPSRLQAVQRLDALANSTDVKVADVQAVIAEHTGARGLVRLRAVLPLIDGGA 180 Query 181 ESPQETWTRLVLIDAGLPKPQTQIRVFDDYGDFVARIDLGYEQLRVGVEYDGPQHWTDPA 240 ESPQETWTRLVLIDAGLPKPQTQIRVFDDYGDFVARIDLGYEQLRVGVEYDGPQHWTDPA Sbjct 181 ESPQETWTRLVLIDAGLPKPQTQIRVFDDYGDFVARIDLGYEQLRVGVEYDGPQHWTDPA 240 Query 241 QRARDIERSTALLDLGWTIIRVTSELLWYRRGTFVGRVDAAMRAAGWRP 289 QRARDIERSTALLDLGWTIIRVTSELLWYRRGTFVGRVDAAMRAAGWRP Sbjct 241 QRARDIERSTALLDLGWTIIRVTSELLWYRRGTFVGRVDAAMRAAGWRP 289 >gi|306778437|ref|ZP_07416774.1| hypothetical protein TMBG_02090 [Mycobacterium tuberculosis SUMu002] gi|306786460|ref|ZP_07424782.1| hypothetical protein TMCG_03678 [Mycobacterium tuberculosis SUMu003] gi|306790825|ref|ZP_07429147.1| hypothetical protein TMDG_01286 [Mycobacterium tuberculosis SUMu004] 13 more sequence titles Length=289 Score = 568 bits (1463), Expect = 4e-160, Method: Compositional matrix adjust. Identities = 288/289 (99%), Positives = 288/289 (99%), Gaps = 0/289 (0%) Query 1 MDELPWPVLGSEVLAAKAIPERAMRQLYEPVYPGVYAPAGVELTARQRAHAAWLWSRRRA 60 MDELPWPVLGSEVLAAKAIPERAMRQLYEPVYPGVYAPAGVELTARQRAHAAWLWSRRRA Sbjct 1 MDELPWPVLGSEVLAAKAIPERAMRQLYEPVYPGVYAPAGVELTARQRAHAAWLWSRRRA 60 Query 61 VVAGNSAAALLGAKWVNPALDAELVHANRKPPPRIVVHTDRLAPHETVAVDGVAVTTPAR 120 VVAGNSAAALLGAKWVNPALDAELVHANRKPPPRIVVHTDRLAPHETVAVDGVAVTTPA Sbjct 61 VVAGNSAAALLGAKWVNPALDAELVHANRKPPPRIVVHTDRLAPHETVAVDGVAVTTPAC 120 Query 121 TAFDIGRRTPSRLQAVQRLDALANSTDVKVADVQAVIAEHTGARGLVRLRAVLPLIDGGA 180 TAFDIGRRTPSRLQAVQRLDALANSTDVKVADVQAVIAEHTGARGLVRLRAVLPLIDGGA Sbjct 121 TAFDIGRRTPSRLQAVQRLDALANSTDVKVADVQAVIAEHTGARGLVRLRAVLPLIDGGA 180 Query 181 ESPQETWTRLVLIDAGLPKPQTQIRVFDDYGDFVARIDLGYEQLRVGVEYDGPQHWTDPA 240 ESPQETWTRLVLIDAGLPKPQTQIRVFDDYGDFVARIDLGYEQLRVGVEYDGPQHWTDPA Sbjct 181 ESPQETWTRLVLIDAGLPKPQTQIRVFDDYGDFVARIDLGYEQLRVGVEYDGPQHWTDPA 240 Query 241 QRARDIERSTALLDLGWTIIRVTSELLWYRRGTFVGRVDAAMRAAGWRP 289 QRARDIERSTALLDLGWTIIRVTSELLWYRRGTFVGRVDAAMRAAGWRP Sbjct 241 QRARDIERSTALLDLGWTIIRVTSELLWYRRGTFVGRVDAAMRAAGWRP 289 >gi|339299975|gb|AEJ52085.1| hypothetical protein CCDC5180_3248 [Mycobacterium tuberculosis CCDC5180] Length=289 Score = 568 bits (1463), Expect = 5e-160, Method: Compositional matrix adjust. Identities = 288/289 (99%), Positives = 288/289 (99%), Gaps = 0/289 (0%) Query 1 MDELPWPVLGSEVLAAKAIPERAMRQLYEPVYPGVYAPAGVELTARQRAHAAWLWSRRRA 60 MDELPWPVLGSEVLAAKAIPERAMRQLYEPVYPGVYAPAGVELTARQRAHAAWLWSRRRA Sbjct 1 MDELPWPVLGSEVLAAKAIPERAMRQLYEPVYPGVYAPAGVELTARQRAHAAWLWSRRRA 60 Query 61 VVAGNSAAALLGAKWVNPALDAELVHANRKPPPRIVVHTDRLAPHETVAVDGVAVTTPAR 120 VVAGNSAAALLGAKWVNPALDAELVHANRKPPPRIVVHTDRLAPHETVAVDGVAVTTPAR Sbjct 61 VVAGNSAAALLGAKWVNPALDAELVHANRKPPPRIVVHTDRLAPHETVAVDGVAVTTPAR 120 Query 121 TAFDIGRRTPSRLQAVQRLDALANSTDVKVADVQAVIAEHTGARGLVRLRAVLPLIDGGA 180 TAFDIGRRTPSRLQAVQRLDALANSTDVKVADVQAVIAEHTGARGLVRLRAVLPLIDGGA Sbjct 121 TAFDIGRRTPSRLQAVQRLDALANSTDVKVADVQAVIAEHTGARGLVRLRAVLPLIDGGA 180 Query 181 ESPQETWTRLVLIDAGLPKPQTQIRVFDDYGDFVARIDLGYEQLRVGVEYDGPQHWTDPA 240 ESPQETWTRLVLIDAGLPKPQTQIRVFDDYGDFVARIDLGYEQLRVGVEYDGPQHWTDPA Sbjct 181 ESPQETWTRLVLIDAGLPKPQTQIRVFDDYGDFVARIDLGYEQLRVGVEYDGPQHWTDPA 240 Query 241 QRARDIERSTALLDLGWTIIRVTSELLWYRRGTFVGRVDAAMRAAGWRP 289 QRARDIERSTALLDLGWTIIRVTSEL WYRRGTFVGRVDAAMRAAGWRP Sbjct 241 QRARDIERSTALLDLGWTIIRVTSELPWYRRGTFVGRVDAAMRAAGWRP 289 >gi|31794731|ref|NP_857224.1| hypothetical protein Mb3585c [Mycobacterium bovis AF2122/97] gi|121639474|ref|YP_979698.1| hypothetical protein BCG_3619c [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224991971|ref|YP_002646660.1| hypothetical protein JTY_3620 [Mycobacterium bovis BCG str. Tokyo 172] 12 more sequence titles Length=289 Score = 566 bits (1458), Expect = 2e-159, Method: Compositional matrix adjust. Identities = 288/289 (99%), Positives = 288/289 (99%), Gaps = 0/289 (0%) Query 1 MDELPWPVLGSEVLAAKAIPERAMRQLYEPVYPGVYAPAGVELTARQRAHAAWLWSRRRA 60 MDELPWPVLGSEVLAAKAIPERAMRQLYEPVYPGVYAPAGVELTARQRAHAAWLWSRRRA Sbjct 1 MDELPWPVLGSEVLAAKAIPERAMRQLYEPVYPGVYAPAGVELTARQRAHAAWLWSRRRA 60 Query 61 VVAGNSAAALLGAKWVNPALDAELVHANRKPPPRIVVHTDRLAPHETVAVDGVAVTTPAR 120 VVAGNSAAALLGAKWVNPALDAELVHANRKPPPRIVVHTDRLAPHETVAVDGVAVTTPAR Sbjct 61 VVAGNSAAALLGAKWVNPALDAELVHANRKPPPRIVVHTDRLAPHETVAVDGVAVTTPAR 120 Query 121 TAFDIGRRTPSRLQAVQRLDALANSTDVKVADVQAVIAEHTGARGLVRLRAVLPLIDGGA 180 TAFDIGRRTPSRLQAVQRLDALANSTDVKVADVQAVIAEHTGARGLVRLRAVLPLIDGGA Sbjct 121 TAFDIGRRTPSRLQAVQRLDALANSTDVKVADVQAVIAEHTGARGLVRLRAVLPLIDGGA 180 Query 181 ESPQETWTRLVLIDAGLPKPQTQIRVFDDYGDFVARIDLGYEQLRVGVEYDGPQHWTDPA 240 ESPQETWTRLVLIDAGLPKPQTQIRVFDDYGDFVARIDLGYEQLRVGVEYDGPQHWTDPA Sbjct 181 ESPQETWTRLVLIDAGLPKPQTQIRVFDDYGDFVARIDLGYEQLRVGVEYDGPQHWTDPA 240 Query 241 QRARDIERSTALLDLGWTIIRVTSELLWYRRGTFVGRVDAAMRAAGWRP 289 QRARDIERSTALLDLGWTIIRVTSELL YRRGTFVGRVDAAMRAAGWRP Sbjct 241 QRARDIERSTALLDLGWTIIRVTSELLRYRRGTFVGRVDAAMRAAGWRP 289 >gi|340628519|ref|YP_004746971.1| hypothetical protein MCAN_35661 [Mycobacterium canettii CIPT 140010059] gi|340006709|emb|CCC45897.1| conserved hypothetical protein [Mycobacterium canettii CIPT 140010059] Length=289 Score = 565 bits (1455), Expect = 3e-159, Method: Compositional matrix adjust. Identities = 287/289 (99%), Positives = 287/289 (99%), Gaps = 0/289 (0%) Query 1 MDELPWPVLGSEVLAAKAIPERAMRQLYEPVYPGVYAPAGVELTARQRAHAAWLWSRRRA 60 MDELPWPVLGSEVLAAKAIPERAMRQLYEPVYPGVYAPAGVELTARQRAHAAWLWSRRRA Sbjct 1 MDELPWPVLGSEVLAAKAIPERAMRQLYEPVYPGVYAPAGVELTARQRAHAAWLWSRRRA 60 Query 61 VVAGNSAAALLGAKWVNPALDAELVHANRKPPPRIVVHTDRLAPHETVAVDGVAVTTPAR 120 VVAGNSAAALLGAKWVNPALDAELVHANRKPPPRIVVHTDRLAPHETVAVDGV VTTPAR Sbjct 61 VVAGNSAAALLGAKWVNPALDAELVHANRKPPPRIVVHTDRLAPHETVAVDGVVVTTPAR 120 Query 121 TAFDIGRRTPSRLQAVQRLDALANSTDVKVADVQAVIAEHTGARGLVRLRAVLPLIDGGA 180 TAFDIGRRTPSRLQAVQRLDALANSTDVKVADVQAVIAEHTGARGLVRLRAVLPLIDGGA Sbjct 121 TAFDIGRRTPSRLQAVQRLDALANSTDVKVADVQAVIAEHTGARGLVRLRAVLPLIDGGA 180 Query 181 ESPQETWTRLVLIDAGLPKPQTQIRVFDDYGDFVARIDLGYEQLRVGVEYDGPQHWTDPA 240 ESPQETWTRLVLIDAGLPKPQTQIRVFDDYGDFVARIDLGYEQLRVGVEYDGPQHWTDPA Sbjct 181 ESPQETWTRLVLIDAGLPKPQTQIRVFDDYGDFVARIDLGYEQLRVGVEYDGPQHWTDPA 240 Query 241 QRARDIERSTALLDLGWTIIRVTSELLWYRRGTFVGRVDAAMRAAGWRP 289 QRARDIERSTALLDLGWTIIRVTSELL YRRGTFVGRVDAAMRAAGWRP Sbjct 241 QRARDIERSTALLDLGWTIIRVTSELLRYRRGTFVGRVDAAMRAAGWRP 289 >gi|289572207|ref|ZP_06452434.1| conserved hypothetical protein [Mycobacterium tuberculosis K85] gi|339633553|ref|YP_004725195.1| hypothetical protein MAF_35670 [Mycobacterium africanum GM041182] gi|289536638|gb|EFD41216.1| conserved hypothetical protein [Mycobacterium tuberculosis K85] gi|339332909|emb|CCC28636.1| conserved hypothetical protein [Mycobacterium africanum GM041182] Length=289 Score = 565 bits (1455), Expect = 4e-159, Method: Compositional matrix adjust. Identities = 287/289 (99%), Positives = 287/289 (99%), Gaps = 0/289 (0%) Query 1 MDELPWPVLGSEVLAAKAIPERAMRQLYEPVYPGVYAPAGVELTARQRAHAAWLWSRRRA 60 MDELPWPVLGSEVLAAKAIPERAMRQLYEPVYPGVYAPAGVELTARQRAHAAWLWSRRRA Sbjct 1 MDELPWPVLGSEVLAAKAIPERAMRQLYEPVYPGVYAPAGVELTARQRAHAAWLWSRRRA 60 Query 61 VVAGNSAAALLGAKWVNPALDAELVHANRKPPPRIVVHTDRLAPHETVAVDGVAVTTPAR 120 VVAGNSAAALLGAKWVNPALDAELVHANRKPPPRIVVHTDRLAPHETVAVDGVAVTTPAR Sbjct 61 VVAGNSAAALLGAKWVNPALDAELVHANRKPPPRIVVHTDRLAPHETVAVDGVAVTTPAR 120 Query 121 TAFDIGRRTPSRLQAVQRLDALANSTDVKVADVQAVIAEHTGARGLVRLRAVLPLIDGGA 180 TAFDIGRRTPSRLQAVQRLDALANSTDVKVADVQAVIAEHTGARGLVRLRAVLPLIDGGA Sbjct 121 TAFDIGRRTPSRLQAVQRLDALANSTDVKVADVQAVIAEHTGARGLVRLRAVLPLIDGGA 180 Query 181 ESPQETWTRLVLIDAGLPKPQTQIRVFDDYGDFVARIDLGYEQLRVGVEYDGPQHWTDPA 240 ESPQETWTRLVLIDAGLPKPQTQIRVFDDYGDF ARIDLGYEQLRVGVEYDGPQHWTDPA Sbjct 181 ESPQETWTRLVLIDAGLPKPQTQIRVFDDYGDFFARIDLGYEQLRVGVEYDGPQHWTDPA 240 Query 241 QRARDIERSTALLDLGWTIIRVTSELLWYRRGTFVGRVDAAMRAAGWRP 289 QRARDIERSTALLDLGWTIIRVTSELL YRRGTFVGRVDAAMRAAGWRP Sbjct 241 QRARDIERSTALLDLGWTIIRVTSELLRYRRGTFVGRVDAAMRAAGWRP 289 >gi|254552662|ref|ZP_05143109.1| hypothetical protein Mtube_19820 [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] Length=277 Score = 537 bits (1384), Expect = 6e-151, Method: Compositional matrix adjust. Identities = 277/289 (96%), Positives = 277/289 (96%), Gaps = 12/289 (4%) Query 1 MDELPWPVLGSEVLAAKAIPERAMRQLYEPVYPGVYAPAGVELTARQRAHAAWLWSRRRA 60 MDELPWPVLGSEVLAAKAIPERAMRQLYEPVYPGVYAPAGVELTARQRAHAAWLWSRRRA Sbjct 1 MDELPWPVLGSEVLAAKAIPERAMRQLYEPVYPGVYAPAGVELTARQRAHAAWLWSRRRA 60 Query 61 VVAGNSAAALLGAKWVNPALDAELVHANRKPPPRIVVHTDRLAPHETVAVDGVAVTTPAR 120 VVAGNSAAALLGAKWVNPALDAELVHANRKPPPRIVVHTDRLAPHETVAVDGVAVTTPAR Sbjct 61 VVAGNSAAALLGAKWVNPALDAELVHANRKPPPRIVVHTDRLAPHETVAVDGVAVTTPAR 120 Query 121 TAFDIGRRTPSRLQAVQRLDALANSTDVKVADVQAVIAEHTGARGLVRLRAVLPLIDGGA 180 TAFDIGRRTPSRLQAVQRLDALANSTDVKVADVQAVIAEHTGARGLVRLRAVLPLIDGGA Sbjct 121 TAFDIGRRTPSRLQAVQRLDALANSTDVKVADVQAVIAEHTGARGLVRLRAVLPLIDGGA 180 Query 181 ESPQETWTRLVLIDAGLPKPQTQIRVFDDYGDFVARIDLGYEQLRVGVEYDGPQHWTDPA 240 ESPQETWTRLVLIDAGLPKPQTQIRVFDDYGDFVARIDLGYEQLRVGVEYDGPQHWTDPA Sbjct 181 ESPQETWTRLVLIDAGLPKPQTQIRVFDDYGDFVARIDLGYEQLRVGVEYDGPQHWTDPA 240 Query 241 QRARDIERSTALLDLGWTIIRVTSELLWYRRGTFVGRVDAAMRAAGWRP 289 QRARDIERSTALLDLGWTIIR FVGRVDAAMRAAGWRP Sbjct 241 QRARDIERSTALLDLGWTIIR------------FVGRVDAAMRAAGWRP 277 >gi|342862384|ref|ZP_08719024.1| hypothetical protein MCOL_25953 [Mycobacterium colombiense CECT 3035] gi|342130055|gb|EGT83389.1| hypothetical protein MCOL_25953 [Mycobacterium colombiense CECT 3035] Length=286 Score = 409 bits (1051), Expect = 3e-112, Method: Compositional matrix adjust. Identities = 216/289 (75%), Positives = 240/289 (84%), Gaps = 3/289 (1%) Query 1 MDELPWPVLGSEVLAAKAIPERAMRQLYEPVYPGVYAPAGVELTARQRAHAAWLWSRRRA 60 M EL LGSE LAAK +PERAMR LYEPVYPGVY P G+ LTAR+RA AAWLWSRR+ Sbjct 1 MTEL---FLGSEALAAKVMPERAMRSLYEPVYPGVYCPGGIALTARERAQAAWLWSRRKG 57 Query 61 VVAGNSAAALLGAKWVNPALDAELVHANRKPPPRIVVHTDRLAPHETVAVDGVAVTTPAR 120 VVAGNSAAALLGAKWV+P LDAELVH NR P IVVH++ L E V VDG+ V +PAR Sbjct 58 VVAGNSAAALLGAKWVSPPLDAELVHVNRHAPAGIVVHSETLLRGEVVEVDGMLVISPAR 117 Query 121 TAFDIGRRTPSRLQAVQRLDALANSTDVKVADVQAVIAEHTGARGLVRLRAVLPLIDGGA 180 TAFD+GR T SRL AVQRLDALAN TDVKV D++AV+AEH G RGLVRL+AVLPL+D GA Sbjct 118 TAFDVGRWTSSRLFAVQRLDALANVTDVKVTDIEAVMAEHRGMRGLVRLKAVLPLVDSGA 177 Query 181 ESPQETWTRLVLIDAGLPKPQTQIRVFDDYGDFVARIDLGYEQLRVGVEYDGPQHWTDPA 240 E PQET TRLVLI AGLP PQTQIRV DDYGDF+ARID+GY +LRVG+EYDGPQHWTD Sbjct 178 EPPQETRTRLVLIAAGLPVPQTQIRVCDDYGDFIARIDMGYRELRVGIEYDGPQHWTDAG 237 Query 241 QRARDIERSTALLDLGWTIIRVTSELLWYRRGTFVGRVDAAMRAAGWRP 289 QR RDI+R TAL DLGWTIIRV+S+LL YR+GTF+ RV AAMRAAGWRP Sbjct 238 QRDRDIDRYTALADLGWTIIRVSSDLLRYRQGTFIARVVAAMRAAGWRP 286 >gi|333992348|ref|YP_004524962.1| hypothetical protein JDM601_3708 [Mycobacterium sp. JDM601] gi|333488316|gb|AEF37708.1| conserved hypothetical protein [Mycobacterium sp. JDM601] Length=305 Score = 408 bits (1048), Expect = 6e-112, Method: Compositional matrix adjust. Identities = 211/287 (74%), Positives = 234/287 (82%), Gaps = 0/287 (0%) Query 1 MDELPWPVLGSEVLAAKAIPERAMRQLYEPVYPGVYAPAGVELTARQRAHAAWLWSRRRA 60 MDEL P LG+E LA KAIPERAMR LY+PVYPGVYAP GVEL+ARQRA AAWLWSRR A Sbjct 1 MDELDRPFLGTEALADKAIPERAMRTLYQPVYPGVYAPWGVELSARQRAEAAWLWSRRHA 60 Query 61 VVAGNSAAALLGAKWVNPALDAELVHANRKPPPRIVVHTDRLAPHETVAVDGVAVTTPAR 120 VVAGNSAAALLGAKWV+PAL AELV+ N K PPR+VVH D LAP E VDG+AVTTPAR Sbjct 61 VVAGNSAAALLGAKWVSPALYAELVYGNHKTPPRLVVHRDTLAPGEVTTVDGMAVTTPAR 120 Query 121 TAFDIGRRTPSRLQAVQRLDALANSTDVKVADVQAVIAEHTGARGLVRLRAVLPLIDGGA 180 TAFDIGRRT SRL AVQRLDALAN+T+V VADV+AVIAEH GAR L LRAVLPL+D GA Sbjct 121 TAFDIGRRTRSRLHAVQRLDALANATEVGVADVEAVIAEHPGARHLNGLRAVLPLVDDGA 180 Query 181 ESPQETWTRLVLIDAGLPKPQTQIRVFDDYGDFVARIDLGYEQLRVGVEYDGPQHWTDPA 240 ES QET TRLVLIDAG P P+TQI V D +G FVAR+D+GY +L+VG+EYDG QHW DP Sbjct 181 ESYQETSTRLVLIDAGFPTPETQIVVRDVFGGFVARVDMGYRELKVGIEYDGAQHWNDPK 240 Query 241 QRARDIERSTALLDLGWTIIRVTSELLWYRRGTFVGRVDAAMRAAGW 287 QR RDI+R AL + GW IIRV++ LL YR T +GRV AM AAGW Sbjct 241 QRQRDIDRQVALAEQGWLIIRVSAVLLRYREATLIGRVRDAMYAAGW 287 >gi|289752268|ref|ZP_06511646.1| conserved hypothetical protein [Mycobacterium tuberculosis T92] gi|289692855|gb|EFD60284.1| conserved hypothetical protein [Mycobacterium tuberculosis T92] Length=153 Score = 300 bits (767), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 153/153 (100%), Positives = 153/153 (100%), Gaps = 0/153 (0%) Query 1 MDELPWPVLGSEVLAAKAIPERAMRQLYEPVYPGVYAPAGVELTARQRAHAAWLWSRRRA 60 MDELPWPVLGSEVLAAKAIPERAMRQLYEPVYPGVYAPAGVELTARQRAHAAWLWSRRRA Sbjct 1 MDELPWPVLGSEVLAAKAIPERAMRQLYEPVYPGVYAPAGVELTARQRAHAAWLWSRRRA 60 Query 61 VVAGNSAAALLGAKWVNPALDAELVHANRKPPPRIVVHTDRLAPHETVAVDGVAVTTPAR 120 VVAGNSAAALLGAKWVNPALDAELVHANRKPPPRIVVHTDRLAPHETVAVDGVAVTTPAR Sbjct 61 VVAGNSAAALLGAKWVNPALDAELVHANRKPPPRIVVHTDRLAPHETVAVDGVAVTTPAR 120 Query 121 TAFDIGRRTPSRLQAVQRLDALANSTDVKVADV 153 TAFDIGRRTPSRLQAVQRLDALANSTDVKVADV Sbjct 121 TAFDIGRRTPSRLQAVQRLDALANSTDVKVADV 153 >gi|169628293|ref|YP_001701942.1| hypothetical protein MAB_1200 [Mycobacterium abscessus ATCC 19977] gi|169240260|emb|CAM61288.1| Conserved hypothetical protein [Mycobacterium abscessus] Length=302 Score = 298 bits (763), Expect = 7e-79, Method: Compositional matrix adjust. Identities = 145/285 (51%), Positives = 205/285 (72%), Gaps = 1/285 (0%) Query 1 MDELPWPVLGSEVLAAKAIPERAMRQLYEPVYPGVYAPAGVELTARQRAHAAWLWSRRRA 60 M ++PWP +E+L+ A+ E +R Y +YPG+ P VE++A QRA++AWLW+ RR Sbjct 1 MGDIPWPFRSTEMLSTGAVTEHYIRTRYRQLYPGICVPREVEVSATQRAYSAWLWTGRRG 60 Query 61 VVAGNSAAALLGAKWVNPALDAELVHANRKPPPRIVVHTDRLAPHETVAVDGVAVTTPAR 120 V+AG +A+A+ GAKWV + +L+H + K + +H D L +E ++G+AVT+PAR Sbjct 61 VIAGLAASAVHGAKWVEAGVVVDLIHRHHKTARGLRIHRDTLMDNEIDRIEGIAVTSPAR 120 Query 121 TAFDIGRRTPSRLQAVQRLDALANSTDVKVADVQAVIAEHTGARGLVRLRAVLPLIDGGA 180 TAFD+GR P + AV+R+DAL +T + V+ V+ +H G RGL RLR+VL L+DGG+ Sbjct 121 TAFDVGRWLP-QAGAVERIDALMAATGLVTEQVEDVMKKHKGVRGLARLRSVLALVDGGS 179 Query 181 ESPQETWTRLVLIDAGLPKPQTQIRVFDDYGDFVARIDLGYEQLRVGVEYDGPQHWTDPA 240 ESPQET TRL+L+ +G P PQTQIRVF+ YGDF+ARID+G+E L+VGVE+DG QHW D Sbjct 180 ESPQETRTRLLLVKSGFPPPQTQIRVFNRYGDFIARIDMGWEDLKVGVEFDGAQHWLDAR 239 Query 241 QRARDIERSTALLDLGWTIIRVTSELLWYRRGTFVGRVDAAMRAA 285 QR+ DI+R++ L GW I+RV++E+L +R GT V RVDAA+R A Sbjct 240 QRSHDIDRASELAAQGWAIVRVSAEMLRHRAGTVVARVDAALRNA 284 >gi|169631239|ref|YP_001704888.1| hypothetical protein MAB_4161 [Mycobacterium abscessus ATCC 19977] gi|169243206|emb|CAM64234.1| Conserved hypothetical protein [Mycobacterium abscessus] Length=286 Score = 282 bits (722), Expect = 3e-74, Method: Compositional matrix adjust. Identities = 146/278 (53%), Positives = 194/278 (70%), Gaps = 2/278 (0%) Query 1 MDELPWPVLGSEVLAAKAIPERAMRQLYEPVYPGVYAPAGVELTARQRAHAAWLWSRRRA 60 M ++PWP++ SE L + + A+RQ + +YPG+YAP ++T R+RA AAWLWSRR+ Sbjct 1 MGDVPWPLIRSEALTNRVVTGYALRQ-FTALYPGIYAPTDAQITPRKRAEAAWLWSRRKG 59 Query 61 VVAGNSAAALLGAKWVNPALDAELVHANRKPPPRIVVHTDRLAPHETVAVDGVAVTTPAR 120 +AG SAAAL G KW+ L+H NR+ P I + +D L E + VDG+ VTTPAR Sbjct 60 TIAGISAAALHGTKWLPQQGPVVLIHTNRRAPRGITLWSDSLPEGERMFVDGLPVTTPAR 119 Query 121 TAFDIGRRTPSRLQAVQRLDALANSTDVKVADVQAVIAEHTGARGLVRLRAVLPLIDGGA 180 TAFDIGRRTP L AVQ LDAL N+T + D++ V H GARGL L VL L+DGGA Sbjct 120 TAFDIGRRTPVDL-AVQHLDALMNATRLSRTDIETVATHHRGARGLHHLANVLGLVDGGA 178 Query 181 ESPQETWTRLVLIDAGLPKPQTQIRVFDDYGDFVARIDLGYEQLRVGVEYDGPQHWTDPA 240 ESP ET TRL+++ AG P PQTQ+ V + +GDFVAR+D+G+ +VG+E+DG QHWT Sbjct 179 ESPWETRTRLLVVRAGFPAPQTQLVVRNRFGDFVARLDMGWPDHKVGIEFDGAQHWTSAQ 238 Query 241 QRARDIERSTALLDLGWTIIRVTSELLWYRRGTFVGRV 278 QR RDI+R+T L+D GW IIRV+S+++ +R GT + RV Sbjct 239 QRTRDIDRATELVDEGWRIIRVSSDMVRHRSGTILARV 276 >gi|41407345|ref|NP_960181.1| hypothetical protein MAP1247 [Mycobacterium avium subsp. paratuberculosis K-10] gi|41395697|gb|AAS03564.1| hypothetical protein MAP_1247 [Mycobacterium avium subsp. paratuberculosis K-10] Length=286 Score = 280 bits (717), Expect = 1e-73, Method: Compositional matrix adjust. Identities = 155/278 (56%), Positives = 195/278 (71%), Gaps = 2/278 (0%) Query 9 LGSEVLAAKAIPERAMRQLYEPVYPGVYAPAGVELTARQRAHAAWLWSRRRAVVAGNSAA 68 +G+E L+A A+ ER +R+ +Y VY G + TA RA AAWLWS RRAVVAGNSAA Sbjct 8 VGTEALSAGALTERDLRRSCTRIYRNVYQ-RGADFTASDRAIAAWLWSGRRAVVAGNSAA 66 Query 69 ALLGAKWVNPALDAELVHANRKPPPRIVVHTDRLAPHETVAVDGVAVTTPARTAFDIGRR 128 ALLGA+WV+P AEL+ ++PPP IV + L P E V GV VTTPARTA+D+GRR Sbjct 67 ALLGAQWVDPRAPAELITDRKRPPPLIVARNETLLPDEITEVRGVPVTTPARTAYDLGRR 126 Query 129 TPSRLQAVQRLDALANSTDVKVADVQAVIAEHTGARGLVRLRAVLPLIDGGAESPQETWT 188 P + AV +D++A +T + V+ ++ H GARG+ +LR VLPLID GAESPQET T Sbjct 127 -PGSVAAVIAIDSMARATGLTTECVEPLMRAHRGARGVRQLRRVLPLIDAGAESPQETRT 185 Query 189 RLVLIDAGLPKPQTQIRVFDDYGDFVARIDLGYEQLRVGVEYDGPQHWTDPAQRARDIER 248 RL ++ AGLPKP TQI V +D+G +ARIDLG+EQ RVGVEYDG QHWTDP RA+DI+R Sbjct 186 RLAIVGAGLPKPSTQITVHNDWGFVLARIDLGWEQWRVGVEYDGAQHWTDPRIRAKDIDR 245 Query 249 STALLDLGWTIIRVTSELLWYRRGTFVGRVDAAMRAAG 286 L GW IIRV+++LL R VGR+ A+RAAG Sbjct 246 VAELERRGWRIIRVSADLLRNRPDVLVGRIREALRAAG 283 >gi|118466228|ref|YP_882416.1| hypothetical protein MAV_3234 [Mycobacterium avium 104] gi|118167515|gb|ABK68412.1| conserved hypothetical protein [Mycobacterium avium 104] Length=279 Score = 278 bits (712), Expect = 5e-73, Method: Compositional matrix adjust. Identities = 155/278 (56%), Positives = 194/278 (70%), Gaps = 2/278 (0%) Query 9 LGSEVLAAKAIPERAMRQLYEPVYPGVYAPAGVELTARQRAHAAWLWSRRRAVVAGNSAA 68 +G+E L+A A+ ER +R+ +Y VY G + TA RA AAWLWS RRAVVAGNSAA Sbjct 1 MGTEALSAGALTERDLRRSCTRIYRNVYQ-RGADFTASDRAIAAWLWSGRRAVVAGNSAA 59 Query 69 ALLGAKWVNPALDAELVHANRKPPPRIVVHTDRLAPHETVAVDGVAVTTPARTAFDIGRR 128 ALLGA+WV+P AEL+ ++PPP IV + L P E V GV VTTPARTA+D+GRR Sbjct 60 ALLGAQWVDPRAPAELITDRKRPPPLIVARNETLLPDEITEVRGVPVTTPARTAYDLGRR 119 Query 129 TPSRLQAVQRLDALANSTDVKVADVQAVIAEHTGARGLVRLRAVLPLIDGGAESPQETWT 188 P + AV +D+LA +T + V+ ++ H GARG+ +LR VLPLID GAESPQET T Sbjct 120 -PGLVAAVIAIDSLARATGLTTECVEPLMRAHRGARGVRQLRRVLPLIDAGAESPQETRT 178 Query 189 RLVLIDAGLPKPQTQIRVFDDYGDFVARIDLGYEQLRVGVEYDGPQHWTDPAQRARDIER 248 RL ++ AGLPKP TQI V +D+G +ARIDLG+EQ RVGVEYDG QHWTDP RA+DI+R Sbjct 179 RLAIVGAGLPKPSTQITVHNDWGFVLARIDLGWEQWRVGVEYDGAQHWTDPRIRAKDIDR 238 Query 249 STALLDLGWTIIRVTSELLWYRRGTFVGRVDAAMRAAG 286 L GW IIRV+++LL R VGR+ A+ AAG Sbjct 239 VAELERRGWRIIRVSADLLRNRPDVLVGRIREALCAAG 276 >gi|336457941|gb|EGO36931.1| Protein of unknown function (DUF559) [Mycobacterium avium subsp. paratuberculosis S397] Length=286 Score = 278 bits (710), Expect = 1e-72, Method: Compositional matrix adjust. Identities = 154/278 (56%), Positives = 194/278 (70%), Gaps = 2/278 (0%) Query 9 LGSEVLAAKAIPERAMRQLYEPVYPGVYAPAGVELTARQRAHAAWLWSRRRAVVAGNSAA 68 +G+E L+A A+ ER +R+ +Y VY G + TA RA AAWLWS RRAVVAGNSAA Sbjct 8 VGTEALSAGALTERDLRRSCTRIYRNVYQ-RGADFTASDRAIAAWLWSGRRAVVAGNSAA 66 Query 69 ALLGAKWVNPALDAELVHANRKPPPRIVVHTDRLAPHETVAVDGVAVTTPARTAFDIGRR 128 ALLGA+WV+P AEL+ ++PPP IV + L P E V GV VTTPARTA+D+GRR Sbjct 67 ALLGAQWVDPRAPAELITDRKRPPPLIVARNETLLPDEITEVRGVPVTTPARTAYDLGRR 126 Query 129 TPSRLQAVQRLDALANSTDVKVADVQAVIAEHTGARGLVRLRAVLPLIDGGAESPQETWT 188 P + AV +D++A +T + V+ ++ H GARG+ +LR VLPLID GAESPQET T Sbjct 127 -PGSVAAVIAIDSMARATGLTTECVEPLMRAHRGARGVRQLRRVLPLIDAGAESPQETRT 185 Query 189 RLVLIDAGLPKPQTQIRVFDDYGDFVARIDLGYEQLRVGVEYDGPQHWTDPAQRARDIER 248 RL ++ AGLPKP TQI V +D+G +ARIDLG+EQ RVGVEYDG QHWT P RA+DI+R Sbjct 186 RLAIVGAGLPKPSTQITVHNDWGFVLARIDLGWEQWRVGVEYDGAQHWTHPRIRAKDIDR 245 Query 249 STALLDLGWTIIRVTSELLWYRRGTFVGRVDAAMRAAG 286 L GW IIRV+++LL R VGR+ A+RAAG Sbjct 246 VAELERRGWRIIRVSADLLRNRPDVLVGRIREALRAAG 283 >gi|108797588|ref|YP_637785.1| hypothetical protein Mmcs_0608 [Mycobacterium sp. MCS] gi|119866675|ref|YP_936627.1| hypothetical protein Mkms_0621 [Mycobacterium sp. KMS] gi|126433211|ref|YP_001068902.1| hypothetical protein Mjls_0599 [Mycobacterium sp. JLS] gi|108768007|gb|ABG06729.1| conserved hypothetical protein [Mycobacterium sp. MCS] gi|119692764|gb|ABL89837.1| conserved hypothetical protein [Mycobacterium sp. KMS] gi|126233011|gb|ABN96411.1| conserved hypothetical protein [Mycobacterium sp. JLS] Length=290 Score = 273 bits (699), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 147/285 (52%), Positives = 192/285 (68%), Gaps = 3/285 (1%) Query 1 MDELPWPVLGSEVLAAKAIPERAMRQLYEPVYPGVYAPAGVELTARQRAHAAWLWSRRRA 60 M + P L E L + R +R+ + +PGV+ G +L+ Q AHAAWLWS R+A Sbjct 1 MHHVNGPFLAREALDDGLLTFRELRRFHRADFPGVWMLRGSDLSMDQLAHAAWLWSGRKA 60 Query 61 VVAGNSAAALLGAKWVNPALDAELVHANRKPPPRIVVHTDRLAPHETVAVDGVAVTTPAR 120 VVAG +A+AL GAKW+ P ELVH NR+PP IVV T+ LAP E V + VT+ R Sbjct 61 VVAGLAASALHGAKWIEPGAPVELVHTNRRPPTGIVVRTETLAPEEMQRVGTLPVTSACR 120 Query 121 TAFDIGRRTPSRL-QAVQRLDALANSTDVKVADVQAVIAEHTGARGLVRLRAVLPLIDGG 179 T FD+GRR RL VQR+DAL N+TDVK+ADV+AVIA H G RGL +LR L L+DGG Sbjct 121 TVFDLGRRL--RLGDGVQRIDALLNATDVKIADVEAVIARHPGVRGLRQLRETLALVDGG 178 Query 180 AESPQETWTRLVLIDAGLPKPQTQIRVFDDYGDFVARIDLGYEQLRVGVEYDGPQHWTDP 239 AESP E+ TRLVL+ AG P PQTQIRV D+ G AR+D+G+ + VGV+++G QHWTDP Sbjct 179 AESPYESLTRLVLVQAGFPPPQTQIRVCDENGYVFARVDMGWPEYLVGVDFEGAQHWTDP 238 Query 240 AQRARDIERSTALLDLGWTIIRVTSELLWYRRGTFVGRVDAAMRA 284 QR+ D+ R T L ++GW +R+TS +L RR F+ +V AA+ + Sbjct 239 KQRSGDVVRYTRLAEMGWIDVRLTSGILHTRRQWFLDQVGAALES 283 >gi|333991884|ref|YP_004524498.1| hypothetical protein JDM601_3244 [Mycobacterium sp. JDM601] gi|333487852|gb|AEF37244.1| conserved hypothetical protein [Mycobacterium sp. JDM601] Length=290 Score = 270 bits (689), Expect = 3e-70, Method: Compositional matrix adjust. Identities = 148/276 (54%), Positives = 192/276 (70%), Gaps = 1/276 (0%) Query 11 SEVLAAKAIPERAMRQLYEPVYPGVYAPAGVELTARQRAHAAWLWSRRRAVVAGNSAAAL 70 SE LAA A+ +R+ Y +YPGV+ P ++LTAR RA+AAWLWSR V+AG SA+A+ Sbjct 11 SEALAAGALTRSRLRRDYVGIYPGVWVPREMQLTARDRAYAAWLWSRYHGVLAGLSASAV 70 Query 71 LGAKWVNPALDAELVHANRKPPPRIVVHTDRLAPHETVAVDGVAVTTPARTAFDIGRRTP 130 LGAKW++ AELVH+NR+ P + VHTD L P E V G+ VTT ARTAFD+GRR P Sbjct 71 LGAKWIDAETPAELVHSNRRAPSLLTVHTDTLLPGEVQMVRGMPVTTAARTAFDLGRRLP 130 Query 131 SRLQAVQRLDALANSTDVKVADVQAVIAEHTGARGLVRLRAVLPLIDGGAESPQETWTRL 190 + + VQR+DAL N+T +KV DV AV H GARGL +L A LPL+DGGA+SP E+ TRL Sbjct 131 T-TEGVQRVDALMNATGLKVVDVAAVADAHRGARGLRQLDATLPLVDGGADSPYESLTRL 189 Query 191 VLIDAGLPKPQTQIRVFDDYGDFVARIDLGYEQLRVGVEYDGPQHWTDPAQRARDIERST 250 +L+ AG P PQTQI V+D +G+ ARID+G+E+ VGV+++G HW DP QR RD ER Sbjct 190 LLVQAGFPPPQTQIPVYDAHGNVGARIDMGWEEYLVGVDFEGAHHWLDPKQRERDAERYN 249 Query 251 ALLDLGWTIIRVTSELLWYRRGTFVGRVDAAMRAAG 286 + + GW IR+TS L R F+ RV AA+ + G Sbjct 250 FIAEAGWIDIRLTSRTLHLRPEAFLERVGAALISRG 285 >gi|118469317|ref|YP_889560.1| hypothetical protein MSMEG_5314 [Mycobacterium smegmatis str. MC2 155] gi|118170604|gb|ABK71500.1| conserved hypothetical protein [Mycobacterium smegmatis str. MC2 155] Length=304 Score = 268 bits (684), Expect = 8e-70, Method: Compositional matrix adjust. Identities = 138/267 (52%), Positives = 183/267 (69%), Gaps = 1/267 (0%) Query 1 MDELPWPVLGSEVLAAKAIPERAMRQLYEPVYPGVYAPAGVELTARQRAHAAWLWSRRRA 60 M + WP E L A A+ R +R+ + VYPGV+ P EL+ QRA AAWLWS R Sbjct 8 MQTIDWPFRAVEALEAGALTFRELRRFHTAVYPGVWVPREAELSPVQRARAAWLWSGRAG 67 Query 61 VVAGNSAAALLGAKWVNPALDAELVHANRKPPPRIVVHTDRLAPHETVAVDGVAVTTPAR 120 V AG SA+A+LG+KW++ AEL+H NR+PP + VH+D L+ ET +DG+ VTTPAR Sbjct 68 VPAGLSASAMLGSKWIDQRDPAELIHTNRRPPRLLTVHSDTLSDGETQVIDGMVVTTPAR 127 Query 121 TAFDIGRRTPSRLQAVQRLDALANSTDVKVADVQAVIAEHTGARGLVRLRAVLPLIDGGA 180 TAFD+GRR P + VQR+DAL N+T VKV +V A+ + GARG+ RLR +L +DGGA Sbjct 128 TAFDLGRRLPF-VDGVQRIDALMNATHVKVEEVLALAEGYRGARGVRRLRLILEYVDGGA 186 Query 181 ESPQETWTRLVLIDAGLPKPQTQIRVFDDYGDFVARIDLGYEQLRVGVEYDGPQHWTDPA 240 ESP E+ TR++L+ G P+P+TQI V D G AR+D+G+ + RV VE+DG QHWTD Sbjct 187 ESPYESSTRIMLVTNGFPEPETQIEVADASGTVFARLDMGWPEYRVAVEFDGAQHWTDSE 246 Query 241 QRARDIERSTALLDLGWTIIRVTSELL 267 QR+ DI+R L LGWT+IRV++ LL Sbjct 247 QRSWDIDRQAMLEALGWTVIRVSAGLL 273 >gi|41406911|ref|NP_959747.1| hypothetical protein MAP0813c [Mycobacterium avium subsp. paratuberculosis K-10] gi|41395261|gb|AAS03130.1| hypothetical protein MAP_0813c [Mycobacterium avium subsp. paratuberculosis K-10] Length=315 Score = 264 bits (674), Expect = 1e-68, Method: Compositional matrix adjust. Identities = 145/281 (52%), Positives = 189/281 (68%), Gaps = 1/281 (0%) Query 6 WPVLGSEVLAAKAIPERAMRQLYEPVYPGVYAPAGVELTARQRAHAAWLWSRRRAVVAGN 65 WP G++ LAA + +R + V+ VY G +LT RA AAWLWS R A +AG Sbjct 6 WPFRGTDALAAGVVTRHRLRTEFTMVHRNVYVRRGQQLTPVTRAVAAWLWSGRTATLAGL 65 Query 66 SAAALLGAKWVNPALDAELVHANRKPPPRIVVHTDRLAPHETVAVDGVAVTTPARTAFDI 125 SAAAL W++ L AEL A R I++H+D L ET DG+++TTPARTAFD+ Sbjct 66 SAAALHRTAWIDDWLPAELNRAGRDKARGIILHSDTLCDDETTMRDGMSLTTPARTAFDL 125 Query 126 GRRTPSRLQAVQRLDALANSTDVKVADVQAVIAEHTGARGLVRLRAVLPLIDGGAESPQE 185 GRR AV RLDAL + +DVK ADV+ + H GARGLV+LR VL L+DGGAESP E Sbjct 126 GRR-KDLTTAVIRLDALMHVSDVKTADVELLADRHRGARGLVQLRRVLTLVDGGAESPYE 184 Query 186 TWTRLVLIDAGLPKPQTQIRVFDDYGDFVARIDLGYEQLRVGVEYDGPQHWTDPAQRARD 245 T TRL+L +GLP+PQTQI V +++G +ARID+G+E+ +VGVE+DG QHWTDPAQR RD Sbjct 185 TKTRLLLAGSGLPRPQTQIEVRNEWGAVLARIDMGWEEWKVGVEFDGAQHWTDPAQRTRD 244 Query 246 IERSTALLDLGWTIIRVTSELLWYRRGTFVGRVDAAMRAAG 286 I+R L GWTI+RV++++L YR + R A+RA+G Sbjct 245 IDRLAELEARGWTIVRVSADMLRYRPYDILSRTRNALRASG 285 >gi|296164410|ref|ZP_06846985.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295900250|gb|EFG79681.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length=293 Score = 259 bits (661), Expect = 4e-67, Method: Compositional matrix adjust. Identities = 146/280 (53%), Positives = 187/280 (67%), Gaps = 1/280 (0%) Query 7 PVLGSEVLAAKAIPERAMRQLYEPVYPGVYAPAGVELTARQRAHAAWLWSRRRAVVAGNS 66 P +G++ + A A +R +R+ +Y VY G ELTAR RA AAWLWS + AVVAG S Sbjct 12 PFVGTDAIRAGAWTQRELRRSCTRIYRNVYQRRGGELTARDRAIAAWLWSGKEAVVAGTS 71 Query 67 AAALLGAKWVNPALDAELVHANRKPPPRIVVHTDRLAPHETVAVDGVAVTTPARTAFDIG 126 AAAL GA+W++P AELV +PP IV + LA E VDG+ VT+ ARTAFD+G Sbjct 72 AAALHGAQWIDPHGPAELVCHRTRPPSLIVTRNETLAAAEVTTVDGIPVTSAARTAFDLG 131 Query 127 RRTPSRLQAVQRLDALANSTDVKVADVQAVIAEHTGARGLVRLRAVLPLIDGGAESPQET 186 RR P AV R+DALA +T + DV ++ H GARG+ +LR VLPL+D GAESPQET Sbjct 132 RR-PGSTVAVIRIDALARATGLVAEDVWPLVDAHRGARGMKQLRRVLPLVDAGAESPQET 190 Query 187 WTRLVLIDAGLPKPQTQIRVFDDYGDFVARIDLGYEQLRVGVEYDGPQHWTDPAQRARDI 246 TRL L+ GLP+PQTQI V + +G +ARID+G+E+ VGVEYDGPQHWTDP RA DI Sbjct 191 RTRLALLRGGLPRPQTQIVVRNVWGAVLARIDMGWEEWLVGVEYDGPQHWTDPRIRANDI 250 Query 247 ERSTALLDLGWTIIRVTSELLWYRRGTFVGRVDAAMRAAG 286 ER+ L GW ++RV ++LL +R V R +A+ A G Sbjct 251 ERTAELERRGWRLVRVGADLLRHRPDVVVERARSALAARG 290 >gi|126432741|ref|YP_001068432.1| hypothetical protein Mjls_0128 [Mycobacterium sp. JLS] gi|126232541|gb|ABN95941.1| conserved hypothetical protein [Mycobacterium sp. JLS] Length=300 Score = 258 bits (659), Expect = 8e-67, Method: Compositional matrix adjust. Identities = 144/281 (52%), Positives = 181/281 (65%), Gaps = 2/281 (0%) Query 7 PVLGSEVLAAKAIPERAMRQLYEPVYPGVYAPAGVELTARQRAHAAWLWSRRRAVVAGNS 66 P LG+E LAA + R + + Y +Y VY PA ELTA RA AWLWS R AV AG S Sbjct 4 PFLGTEALAAGMVTRRQLGRRYRALYRNVYLPAEQELTAVTRAKGAWLWSGRDAVAAGLS 63 Query 67 AAALLGAKWVNPALDAELVHANRKPPPRIVVHTDRLAPHETVAVDGVAVTTPARTAFDIG 126 A+AL G+KW+ AEL+ I++ DRL E G+ TT ARTAFD+G Sbjct 64 ASALHGSKWIEANEPAELIRIG-DAVSGILIRRDRLPEDEVCVRLGIPTTTAARTAFDLG 122 Query 127 RRTPSRLQAVQRLDALANSTDVKVADVQAVIAEHTGARGLVRLRAVLPLIDGGAESPQET 186 RR + AVQR+DALAN+T + ADV ++ H GARG+V+ R + L+DGGAESP ET Sbjct 123 RRG-NLTAAVQRIDALANATLLTRADVDPLLERHRGARGIVQARRAIDLMDGGAESPPET 181 Query 187 WTRLVLIDAGLPKPQTQIRVFDDYGDFVARIDLGYEQLRVGVEYDGPQHWTDPAQRARDI 246 RL+LI A P+P+TQI V D +G FV RID+GY + ++GVEYDGPQHWTDP Q ARDI Sbjct 182 TVRLMLIAARFPRPETQIVVRDQFGRFVGRIDMGYREYQIGVEYDGPQHWTDPIQHARDI 241 Query 247 ERSTALLDLGWTIIRVTSELLWYRRGTFVGRVDAAMRAAGW 287 +R L GW IIRV+ ++L +RR + R AMRAAGW Sbjct 242 DRQAELAAQGWVIIRVSRDILRHRRDVAIRRTRDAMRAAGW 282 >gi|333989076|ref|YP_004521690.1| hypothetical protein JDM601_0436 [Mycobacterium sp. JDM601] gi|333485044|gb|AEF34436.1| conserved hypothetical protein [Mycobacterium sp. JDM601] Length=256 Score = 258 bits (659), Expect = 8e-67, Method: Compositional matrix adjust. Identities = 139/248 (57%), Positives = 170/248 (69%), Gaps = 1/248 (0%) Query 35 VYAPAGVELTARQRAHAAWLWSRRRAVVAGNSAAALLGAKWVNPALDAELVHANRKPPPR 94 ++ P +L+ +QRA AAWLWSRRR V+AG SAAALLGAKW+ P AELVH NR+PP Sbjct 1 MWIPRDADLSPKQRAMAAWLWSRRRGVIAGLSAAALLGAKWIEPDAPAELVHTNRRPPEL 60 Query 95 IVVHTDRLAPHETVAVDGVAVTTPARTAFDIGRRTPSRLQAVQRLDALANSTDVKVADVQ 154 I VH+D L P ET +DGV +TT ARTAFDIGRR P Q VQR+DAL ++TDVKV D+Q Sbjct 61 IRVHSDLLLPGETHELDGVPLTTAARTAFDIGRRLPL-TQGVQRIDALMHATDVKVVDIQ 119 Query 155 AVIAEHTGARGLVRLRAVLPLIDGGAESPQETWTRLVLIDAGLPKPQTQIRVFDDYGDFV 214 AVIA H G RGL +L L +D GAES E+ RL L+ AG P PQTQI V+DDYG Sbjct 120 AVIAGHRGVRGLQQLTDTLRFVDAGAESLYESRARLALVQAGFPTPQTQIPVYDDYGRVF 179 Query 215 ARIDLGYEQLRVGVEYDGPQHWTDPAQRARDIERSTALLDLGWTIIRVTSELLWYRRGTF 274 ARID+G+ VGV+++G HWTDP QRA D ERS + + GW R+ + L R F Sbjct 180 ARIDMGWPDYLVGVDFEGAHHWTDPEQRAWDAERSVLIAERGWIDFRLAAATLHNRPRLF 239 Query 275 VGRVDAAM 282 + RV AA+ Sbjct 240 LDRVGAAL 247 >gi|108797118|ref|YP_637315.1| hypothetical protein Mmcs_0138 [Mycobacterium sp. MCS] gi|119866203|ref|YP_936155.1| hypothetical protein Mkms_0147 [Mycobacterium sp. KMS] gi|108767537|gb|ABG06259.1| conserved hypothetical protein [Mycobacterium sp. MCS] gi|119692292|gb|ABL89365.1| conserved hypothetical protein [Mycobacterium sp. KMS] Length=300 Score = 256 bits (654), Expect = 2e-66, Method: Compositional matrix adjust. Identities = 143/281 (51%), Positives = 180/281 (65%), Gaps = 2/281 (0%) Query 7 PVLGSEVLAAKAIPERAMRQLYEPVYPGVYAPAGVELTARQRAHAAWLWSRRRAVVAGNS 66 P LG+E LAA + R + + Y +Y VY PA ELTA RA AWLWS R AV G S Sbjct 4 PFLGTEALAAGMVTRRQLGRRYRALYRNVYLPAEQELTAVTRAKGAWLWSGRDAVAVGLS 63 Query 67 AAALLGAKWVNPALDAELVHANRKPPPRIVVHTDRLAPHETVAVDGVAVTTPARTAFDIG 126 A+AL G+KW+ AEL+ I++ DRL E G+ TT ARTAFD+G Sbjct 64 ASALHGSKWIEANEPAELIRIG-DAVSGILIRRDRLPEDEVCVRLGIPTTTAARTAFDLG 122 Query 127 RRTPSRLQAVQRLDALANSTDVKVADVQAVIAEHTGARGLVRLRAVLPLIDGGAESPQET 186 RR + AVQR+DALAN+T + ADV ++ H GARG+V+ R + L+DGGAESP ET Sbjct 123 RRG-NLTAAVQRIDALANATLLTRADVDPLLERHRGARGIVQARRAIDLMDGGAESPPET 181 Query 187 WTRLVLIDAGLPKPQTQIRVFDDYGDFVARIDLGYEQLRVGVEYDGPQHWTDPAQRARDI 246 RL+LI A P+P+TQI V D +G FV RID+GY + ++GVEYDGPQHWTDP Q ARDI Sbjct 182 TVRLMLIAARFPRPETQIVVRDQFGRFVGRIDMGYREYQIGVEYDGPQHWTDPIQHARDI 241 Query 247 ERSTALLDLGWTIIRVTSELLWYRRGTFVGRVDAAMRAAGW 287 +R L GW IIRV+ ++L +RR + R AMRAAGW Sbjct 242 DRQAELAAQGWVIIRVSRDILRHRRDVAIRRTRDAMRAAGW 282 >gi|254773888|ref|ZP_05215404.1| hypothetical protein MaviaA2_04327 [Mycobacterium avium subsp. avium ATCC 25291] Length=292 Score = 252 bits (644), Expect = 4e-65, Method: Compositional matrix adjust. Identities = 139/263 (53%), Positives = 180/263 (69%), Gaps = 1/263 (0%) Query 24 MRQLYEPVYPGVYAPAGVELTARQRAHAAWLWSRRRAVVAGNSAAALLGAKWVNPALDAE 83 MR + V+ VY G +LT RA AAWLWS R A +AG SAAAL W++ L AE Sbjct 1 MRTEFTMVHRNVYVRRGQQLTPVTRAVAAWLWSGRTATLAGLSAAALHRTAWIDDWLPAE 60 Query 84 LVHANRKPPPRIVVHTDRLAPHETVAVDGVAVTTPARTAFDIGRRTPSRLQAVQRLDALA 143 L A R I++H+D L ET DG+++TTPARTAFD+GRR AV RLDAL Sbjct 61 LNRAGRDKARGIILHSDTLCDDETTMRDGMSLTTPARTAFDLGRR-KGLTTAVIRLDALM 119 Query 144 NSTDVKVADVQAVIAEHTGARGLVRLRAVLPLIDGGAESPQETWTRLVLIDAGLPKPQTQ 203 +++DVK ADV+ + H GARGLV+LR VL L+DGGAESP ET TRL+L +GLP+PQTQ Sbjct 120 HASDVKTADVELLADRHRGARGLVQLRRVLTLVDGGAESPYETKTRLLLAGSGLPRPQTQ 179 Query 204 IRVFDDYGDFVARIDLGYEQLRVGVEYDGPQHWTDPAQRARDIERSTALLDLGWTIIRVT 263 I V +++G +ARID+G+E+ +VGVE+DG QHWTDPAQR RDI+R L GWTI+RV+ Sbjct 180 IEVRNEWGAVLARIDMGWEEWKVGVEFDGAQHWTDPAQRTRDIDRLAELEARGWTIVRVS 239 Query 264 SELLWYRRGTFVGRVDAAMRAAG 286 +++L YR + R A+ A+G Sbjct 240 ADMLRYRPYDILARTRNALGASG 262 >gi|118462486|ref|YP_880262.1| hypothetical protein MAV_1002 [Mycobacterium avium 104] gi|118163773|gb|ABK64670.1| conserved hypothetical protein [Mycobacterium avium 104] Length=293 Score = 251 bits (641), Expect = 8e-65, Method: Compositional matrix adjust. Identities = 138/256 (54%), Positives = 178/256 (70%), Gaps = 1/256 (0%) Query 31 VYPGVYAPAGVELTARQRAHAAWLWSRRRAVVAGNSAAALLGAKWVNPALDAELVHANRK 90 V+ VY G +LT RA AAWLWS R A +AG SAAAL W++ L AEL A R Sbjct 2 VHRNVYVRRGQQLTPVTRAVAAWLWSGRTATLAGLSAAALHRTAWIDDWLPAELNRAGRD 61 Query 91 PPPRIVVHTDRLAPHETVAVDGVAVTTPARTAFDIGRRTPSRLQAVQRLDALANSTDVKV 150 I++H+D L ET DG+++TTPARTAFD+GRR AV RLDAL +++DVK Sbjct 62 KARGIILHSDTLCDDETTMRDGMSLTTPARTAFDLGRR-KGLTTAVIRLDALMHASDVKT 120 Query 151 ADVQAVIAEHTGARGLVRLRAVLPLIDGGAESPQETWTRLVLIDAGLPKPQTQIRVFDDY 210 ADV+ + H GARGLV+LR VL L+DGGAESP ET TRL+L +GLP+PQTQI V +++ Sbjct 121 ADVELLADRHRGARGLVQLRRVLTLVDGGAESPYETKTRLLLAGSGLPRPQTQIEVRNEW 180 Query 211 GDFVARIDLGYEQLRVGVEYDGPQHWTDPAQRARDIERSTALLDLGWTIIRVTSELLWYR 270 G +ARID+G+E+ +VGVE+DG QHWTDPAQR RDI+R L GWTI+RV++++L YR Sbjct 181 GAVLARIDMGWEEWKVGVEFDGAQHWTDPAQRTRDIDRFAELEARGWTIVRVSADMLRYR 240 Query 271 RGTFVGRVDAAMRAAG 286 + R A+RA+G Sbjct 241 PYDILSRTRNALRASG 256 >gi|336461246|gb|EGO40121.1| Protein of unknown function (DUF559) [Mycobacterium avium subsp. paratuberculosis S397] Length=286 Score = 250 bits (639), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 138/256 (54%), Positives = 177/256 (70%), Gaps = 1/256 (0%) Query 31 VYPGVYAPAGVELTARQRAHAAWLWSRRRAVVAGNSAAALLGAKWVNPALDAELVHANRK 90 V+ VY G +LT RA AAWLWS R A +AG SAAAL W++ L AEL A R Sbjct 2 VHRNVYVRRGQQLTPVTRAVAAWLWSGRTATLAGLSAAALHRTAWIDDWLPAELNRAGRD 61 Query 91 PPPRIVVHTDRLAPHETVAVDGVAVTTPARTAFDIGRRTPSRLQAVQRLDALANSTDVKV 150 I++H+D L ET DG+++TTPARTAFD+GRR AV RLDAL + +DVK Sbjct 62 KARGIILHSDTLCDDETTMRDGMSLTTPARTAFDLGRR-KDLTTAVIRLDALMHVSDVKT 120 Query 151 ADVQAVIAEHTGARGLVRLRAVLPLIDGGAESPQETWTRLVLIDAGLPKPQTQIRVFDDY 210 ADV+ + H GARGLV+LR VL L+DGGAESP ET TRL+L +GLP+PQTQI V +++ Sbjct 121 ADVELLADRHRGARGLVQLRRVLTLVDGGAESPYETKTRLLLAGSGLPRPQTQIEVRNEW 180 Query 211 GDFVARIDLGYEQLRVGVEYDGPQHWTDPAQRARDIERSTALLDLGWTIIRVTSELLWYR 270 G +ARID+G+E+ +VGVE+DG QHWTDPAQR RDI+R L GWTI+RV++++L YR Sbjct 181 GAVLARIDMGWEEWKVGVEFDGAQHWTDPAQRTRDIDRLAELEARGWTIVRVSADMLRYR 240 Query 271 RGTFVGRVDAAMRAAG 286 + R A+RA+G Sbjct 241 PYDILSRTRNALRASG 256 >gi|15610653|ref|NP_218034.1| hypothetical protein Rv3517 [Mycobacterium tuberculosis H37Rv] gi|31794692|ref|NP_857185.1| hypothetical protein Mb3546 [Mycobacterium bovis AF2122/97] gi|121639435|ref|YP_979659.1| hypothetical protein BCG_3580 [Mycobacterium bovis BCG str. Pasteur 1173P2] 66 more sequence titles Length=279 Score = 249 bits (636), Expect = 3e-64, Method: Compositional matrix adjust. Identities = 136/275 (50%), Positives = 183/275 (67%), Gaps = 4/275 (1%) Query 7 PVLGSEVLAAKAIPERAMRQLYEPVYPGVYAPAGVELTARQRAHAAWLWSRRRAVVAGNS 66 P LGSE +A+ A+ +R Y ++P VY G +LTA RA AAWLWSRRR V+AG S Sbjct 4 PFLGSEAIASGALTRHRLRSAYATIHPDVYVSPGADLTAWSRAQAAWLWSRRRGVIAGQS 63 Query 67 AAALLGAKWVNPALDAELVHANRKPPPRIVVHTDRLAPHETVAVDGVAVTTPARTAFDIG 126 AAA+ GAKWV+ AEL++ +R+PP I +DR+A E + G+ TTPARTA D+ Sbjct 64 AAAMHGAKWVDARQAAELLYDHRRPPAGIHTWSDRVADDEIQPISGMNTTTPARTALDLA 123 Query 127 RRTPSRLQAVQRLDALANSTDVKVADVQAVIAEHTGARGLVRLRAVLPLIDGGAESPQET 186 RR P +AV +DALA +TD+K+ADV+ + + G+RG+ R L L+D GAESP+ET Sbjct 124 RRYPVG-KAVAAIDALARATDLKLADVEMLAERYRGSRGIRNARIALDLVDPGAESPRET 182 Query 187 WTRLVLIDAGLPKPQTQIRVFDDYGDFVARIDLGYEQLRVGVEYDGPQHWTDPAQRARDI 246 W RL+LI AG P+PQTQI V+D+YG VA ID+G+ ++VGV+Y+G H TD +DI Sbjct 183 WLRLLLIRAGFPRPQTQIPVYDEYGQLVAVIDMGWAGIKVGVDYEGDHHRTDRRTFNKDI 242 Query 247 ERSTALLDLGWTIIRVTSELLWYRRGTFVGRVDAA 281 +R+ AL +LGWT +RVT E G + RV AA Sbjct 243 KRAEALTELGWTDVRVTVEDT---EGGIIWRVSAA 274 >gi|289445109|ref|ZP_06434853.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A] gi|289418067|gb|EFD15268.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A] Length=279 Score = 248 bits (634), Expect = 5e-64, Method: Compositional matrix adjust. Identities = 136/275 (50%), Positives = 183/275 (67%), Gaps = 4/275 (1%) Query 7 PVLGSEVLAAKAIPERAMRQLYEPVYPGVYAPAGVELTARQRAHAAWLWSRRRAVVAGNS 66 P LGSE +A+ A+ +R Y ++P VY G +LTA RA AAWLWSRRR V+AG S Sbjct 4 PFLGSEAIASGALTRHRLRSAYATIHPDVYVSPGADLTAWSRAQAAWLWSRRRGVIAGQS 63 Query 67 AAALLGAKWVNPALDAELVHANRKPPPRIVVHTDRLAPHETVAVDGVAVTTPARTAFDIG 126 AAA+ GAKWV+ AEL++ +R+PP I +DR+A E + G+ TTPARTA D+ Sbjct 64 AAAMHGAKWVDARPAAELLYDHRRPPAGIHTWSDRVADDEIQPISGMNTTTPARTALDLA 123 Query 127 RRTPSRLQAVQRLDALANSTDVKVADVQAVIAEHTGARGLVRLRAVLPLIDGGAESPQET 186 RR P +AV +DALA +TD+K+ADV+ + + G+RG+ R L L+D GAESP+ET Sbjct 124 RRYPVG-KAVAAIDALARATDLKLADVEMLAERYRGSRGIRNARIALDLVDPGAESPRET 182 Query 187 WTRLVLIDAGLPKPQTQIRVFDDYGDFVARIDLGYEQLRVGVEYDGPQHWTDPAQRARDI 246 W RL+LI AG P+PQTQI V+D+YG VA ID+G+ ++VGV+Y+G H TD +DI Sbjct 183 WLRLLLIRAGFPRPQTQIPVYDEYGQLVAVIDMGWAGIKVGVDYEGDHHRTDRRTFNKDI 242 Query 247 ERSTALLDLGWTIIRVTSELLWYRRGTFVGRVDAA 281 +R+ AL +LGWT +RVT E G + RV AA Sbjct 243 KRAEALTELGWTDVRVTVEDT---EGGIIWRVSAA 274 >gi|254823200|ref|ZP_05228201.1| hypothetical protein MintA_24944 [Mycobacterium intracellulare ATCC 13950] Length=288 Score = 248 bits (632), Expect = 9e-64, Method: Compositional matrix adjust. Identities = 136/247 (56%), Positives = 171/247 (70%), Gaps = 1/247 (0%) Query 24 MRQLYEPVYPGVYAPAGVELTARQRAHAAWLWSRRRAVVAGNSAAALLGAKWVNPALDAE 83 MR +E V+ VY G LT RA AAWLWSRR A +AG SAAAL KW++ L AE Sbjct 1 MRTEFEMVHRNVYIRRGQLLTPVTRAVAAWLWSRRTATLAGLSAAALHRTKWIDDWLPAE 60 Query 84 LVHANRKPPPRIVVHTDRLAPHETVAVDGVAVTTPARTAFDIGRRTPSRLQAVQRLDALA 143 L A R I+VH+D L E DG+ +TTPARTAFD+GRR AV RLDAL Sbjct 61 LNRAGRDKARGIIVHSDTLDDDEICTRDGMRLTTPARTAFDLGRRK-GLTTAVIRLDALM 119 Query 144 NSTDVKVADVQAVIAEHTGARGLVRLRAVLPLIDGGAESPQETWTRLVLIDAGLPKPQTQ 203 ++TD+K ADV+ + H GARGLV+LR L ++DGGAESP ET TRL+L +GLP+PQTQ Sbjct 120 HATDLKPADVELLADRHRGARGLVQLRTALTMVDGGAESPYETRTRLLLAGSGLPRPQTQ 179 Query 204 IRVFDDYGDFVARIDLGYEQLRVGVEYDGPQHWTDPAQRARDIERSTALLDLGWTIIRVT 263 I V +++G +ARID+G+E+ + GVE+DG HWTDPAQRARDI+R L GW+IIRV+ Sbjct 180 IEVLNEWGAVLARIDMGWEEWKAGVEFDGAHHWTDPAQRARDIDRLAELEAQGWSIIRVS 239 Query 264 SELLWYR 270 +E+L YR Sbjct 240 AEMLRYR 246 >gi|120405993|ref|YP_955822.1| hypothetical protein Mvan_5044 [Mycobacterium vanbaalenii PYR-1] gi|119958811|gb|ABM15816.1| conserved hypothetical protein [Mycobacterium vanbaalenii PYR-1] Length=291 Score = 248 bits (632), Expect = 1e-63, Method: Compositional matrix adjust. Identities = 138/280 (50%), Positives = 184/280 (66%), Gaps = 1/280 (0%) Query 7 PVLGSEVLAAKAIPERAMRQLYEPVYPGVYAPAGVELTARQRAHAAWLWSRRRAVVAGNS 66 P LG+E LAA ++ ++ +E V+ VYA +LT Q+A AAWLWS RR + G S Sbjct 3 PFLGTEALAAGSLTRYRLKTRFELVHRNVYALNREQLTPVQKARAAWLWSGRRGTLVGLS 62 Query 67 AAALLGAKWVNPALDAELVHANRKPPPRIVVHTDRLAPHETVAVDGVAVTTPARTAFDIG 126 AAA+LG++W++ L AEL ++ P IV+ D L P E V G+ VT+PARTAFD+G Sbjct 63 AAAVLGSRWIDARLPAELNQRSQHKTPGIVLRADTLGPDEIVTARGMPVTSPARTAFDLG 122 Query 127 RRTPSRLQAVQRLDALANSTDVKVADVQAVIAEHTGARGLVRLRAVLPLIDGGAESPQET 186 RR L AV R+DAL +T +D+ ++ H GARGLV+LR L L+D +ESPQE+ Sbjct 123 RRRGLTL-AVIRMDALMRTTGATTSDIATLLTRHKGARGLVQLRRALELVDPASESPQES 181 Query 187 WTRLVLIDAGLPKPQTQIRVFDDYGDFVARIDLGYEQLRVGVEYDGPQHWTDPAQRARDI 246 TRL+L+ AGLP ++QI VFD G V R+D+G+E +VGVEY+G QHWT+P Q A DI Sbjct 182 RTRLLLVKAGLPPERSQIDVFDRDGYHVGRVDMGWETWKVGVEYEGEQHWTNPEQYAHDI 241 Query 247 ERSTALLDLGWTIIRVTSELLWYRRGTFVGRVDAAMRAAG 286 +R AL GW IIRV++E+L R T V RV A+RAAG Sbjct 242 DRQAALEAEGWRIIRVSAEILRDRPTTIVSRVWLALRAAG 281 >gi|289755646|ref|ZP_06515024.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054] gi|289696233|gb|EFD63662.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054] Length=279 Score = 246 bits (629), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 135/275 (50%), Positives = 182/275 (67%), Gaps = 4/275 (1%) Query 7 PVLGSEVLAAKAIPERAMRQLYEPVYPGVYAPAGVELTARQRAHAAWLWSRRRAVVAGNS 66 P LGSE +A+ A+ +R Y ++P VY G +LTA RA AAWLWSRRR V+AG S Sbjct 4 PFLGSEAIASGALTRHRLRSAYATIHPDVYVSPGADLTAWSRAQAAWLWSRRRGVIAGQS 63 Query 67 AAALLGAKWVNPALDAELVHANRKPPPRIVVHTDRLAPHETVAVDGVAVTTPARTAFDIG 126 AAA+ GAKWV+ AEL++ +R+P I +DR+A E + G+ TTPARTA D+ Sbjct 64 AAAMHGAKWVDARQAAELLYDHRRPAAGIHTWSDRVADDEIQPISGMNTTTPARTALDLA 123 Query 127 RRTPSRLQAVQRLDALANSTDVKVADVQAVIAEHTGARGLVRLRAVLPLIDGGAESPQET 186 RR P +AV +DALA +TD+K+ADV+ + + G+RG+ R L L+D GAESP+ET Sbjct 124 RRYPVG-KAVAAIDALARATDLKLADVEMLAERYRGSRGIRNARIALDLVDPGAESPRET 182 Query 187 WTRLVLIDAGLPKPQTQIRVFDDYGDFVARIDLGYEQLRVGVEYDGPQHWTDPAQRARDI 246 W RL+LI AG P+PQTQI V+D+YG VA ID+G+ ++VGV+Y+G H TD +DI Sbjct 183 WLRLLLIRAGFPRPQTQIPVYDEYGQLVAVIDMGWAGIKVGVDYEGDHHRTDRRTFNKDI 242 Query 247 ERSTALLDLGWTIIRVTSELLWYRRGTFVGRVDAA 281 +R+ AL +LGWT +RVT E G + RV AA Sbjct 243 KRAEALTELGWTDVRVTVEDT---EGGIIWRVSAA 274 >gi|240172349|ref|ZP_04751008.1| hypothetical protein MkanA1_23743 [Mycobacterium kansasii ATCC 12478] Length=279 Score = 241 bits (615), Expect = 9e-62, Method: Compositional matrix adjust. Identities = 131/259 (51%), Positives = 176/259 (68%), Gaps = 1/259 (0%) Query 7 PVLGSEVLAAKAIPERAMRQLYEPVYPGVYAPAGVELTARQRAHAAWLWSRRRAVVAGNS 66 P +GSE +A A+ +R Y V+P VY P G +LTA RAHAAWLWSRRR VV G+S Sbjct 4 PFIGSEAIATGALTPYRLRSRYVAVHPDVYVPPGTDLTATTRAHAAWLWSRRRGVVGGHS 63 Query 67 AAALLGAKWVNPALDAELVHANRKPPPRIVVHTDRLAPHETVAVDGVAVTTPARTAFDIG 126 A+ALLGAKWV+ A+L++ +R+PP I+ + R+A E V G+ TTPARTAFD+ Sbjct 64 ASALLGAKWVDHRAPAQLLYDHRRPPRGILTWSSRVADDEIQLVRGMPATTPARTAFDLA 123 Query 127 RRTPSRLQAVQRLDALANSTDVKVADVQAVIAEHTGARGLVRLRAVLPLIDGGAESPQET 186 R P +AV +DALA +T+++V D + + + G R + R R+ L L+D GAESP+ET Sbjct 124 CRHPVG-KAVAAIDALARATNLQVGDAELLAERYKGRRSIRRARSALKLVDAGAESPRET 182 Query 187 WTRLVLIDAGLPKPQTQIRVFDDYGDFVARIDLGYEQLRVGVEYDGPQHWTDPAQRARDI 246 W RL+LIDAG P PQTQ+ V+ DYG+ VA +D+G+E ++V VEY+G H TD Q +DI Sbjct 183 WLRLLLIDAGYPAPQTQMAVYGDYGEIVALLDMGWEHIKVAVEYEGDHHRTDRRQFNKDI 242 Query 247 ERSTALLDLGWTIIRVTSE 265 R AL DLGW ++RVT E Sbjct 243 ARFEALSDLGWMVVRVTVE 261 >gi|254773599|ref|ZP_05215115.1| hypothetical protein MaviaA2_02830 [Mycobacterium avium subsp. avium ATCC 25291] Length=290 Score = 240 bits (612), Expect = 2e-61, Method: Compositional matrix adjust. Identities = 126/259 (49%), Positives = 177/259 (69%), Gaps = 2/259 (0%) Query 7 PVLGSEVLAAKAIPERAMRQLYEPVYPGVYAPAGVELTARQRAHAAWLWSRRRAVVAGNS 66 P +GSE +A+ + A+R + V+P VY PAG L+A RA +AWLWSRRR VVAG S Sbjct 4 PFIGSEAVASGLVTPYALRSRFVRVHPDVYVPAGTALSAGLRARSAWLWSRRRGVVAGRS 63 Query 67 AAALLGAKWVNPALDAELVHANRKPPPRIVVHTDRLAPHETVAVDGVAVTTPARTAFDIG 126 AAAL G KW++ A+L++ R+PP I +DRL E + G+ VTTPARTA DI Sbjct 64 AAALYGTKWIDDRAPAQLLYPYRRPPDGIQTWSDRLVGDEIQTIGGMPVTTPARTALDIA 123 Query 127 RRTPSRLQAVQRLDALANSTDVKVADVQAVIAEHTGARGLVRLRAVLPLIDGGAESPQET 186 R+P +AV +DALA +T++KV +++ + + G RG+ R R+VLPL+D GAESP+ET Sbjct 124 CRSPVD-KAVAAIDALARATELKVLEIELLADRYRGRRGITRARSVLPLVDAGAESPRET 182 Query 187 WTRLVLIDAGLPKPQTQIRVFDDYGDFVARIDLGYEQLRVGVEYDGPQHWTDPAQRARDI 246 W RL+L+ AG P+P+TQ+ V YG +A +D+G+E +++ VEYDG QH TD Q +DI Sbjct 183 WLRLLLLRAGFPRPRTQLPV-RQYGALIACLDMGWEDIKLAVEYDGDQHRTDRRQFTKDI 241 Query 247 ERSTALLDLGWTIIRVTSE 265 R+ L +LGWT++RVT+E Sbjct 242 RRAEVLAELGWTVVRVTAE 260 >gi|118471345|ref|YP_885284.1| hypothetical protein MSMEG_0881 [Mycobacterium smegmatis str. MC2 155] gi|118172632|gb|ABK73528.1| conserved hypothetical protein [Mycobacterium smegmatis str. MC2 155] Length=277 Score = 239 bits (611), Expect = 3e-61, Method: Compositional matrix adjust. Identities = 139/280 (50%), Positives = 188/280 (68%), Gaps = 8/280 (2%) Query 7 PVLGSEVLAAKAIPERAMRQLYEPVYPGVYAPAGVELTARQRAHAAWLWSRRRAVVAGNS 66 P +GS +++ A+ R +++ Y +Y VY P +E+TAR RA AAWL +R A +AG S Sbjct 3 PFIGSAAVSSGALTRRGLQRHYTALYRDVYIPRDLEVTARIRAEAAWLATR--APLAGTS 60 Query 67 AAALLGAKWVNPALDAELVHANRKPPPRIVVHTDRLAPHETVAVDGVAVTTPARTAFDIG 126 AAA+LG +W+ P L A+++ A+R PP IV H+ LAP ET V G+ TTPARTAFD+G Sbjct 61 AAAVLGTRWLRPELPAQIIRADRHAPPGIVAHSWTLAPGETCLVAGMDATTPARTAFDLG 120 Query 127 RRTPSRLQAVQRLDALANSTDVKVADVQAVIAEHTGARGLVRLRAVLPLIDGGAESPQET 186 R + AV +DAL N+T +K ADV AV H GARG+ RLR +LPL+DGGAESPQE+ Sbjct 121 RLHRAG-DAVPLVDALLNATGIKPADVLAVADAHPGARGVARLRVLLPLLDGGAESPQES 179 Query 187 WTRLVLIDAGLPKPQTQIRVFDDYGDFVARIDLGYEQLRVGVEYDGPQHWTDPAQRARDI 246 RLVL+ GLP PQTQI ++ D R+D+G+ + +V VEYDG QHW+D QR+ DI Sbjct 180 RLRLVLVRGGLPVPQTQI----EFRDLRIRVDMGWPEWKVAVEYDGVQHWSDRRQRSWDI 235 Query 247 ERSTALLDLGWTIIRVTSELLWYRRGTFVGRVDAAMRAAG 286 +R L + GW ++RV++E+L R V RV A +RAAG Sbjct 236 DRIALLEEAGWVVVRVSAEML-SRPHVVVERVRAKLRAAG 274 >gi|118463860|ref|YP_879922.1| hypothetical protein MAV_0642 [Mycobacterium avium 104] gi|118165147|gb|ABK66044.1| conserved hypothetical protein [Mycobacterium avium 104] Length=290 Score = 239 bits (609), Expect = 5e-61, Method: Compositional matrix adjust. Identities = 126/259 (49%), Positives = 176/259 (68%), Gaps = 2/259 (0%) Query 7 PVLGSEVLAAKAIPERAMRQLYEPVYPGVYAPAGVELTARQRAHAAWLWSRRRAVVAGNS 66 P +GSE +A+ + A+R + V+P VY PAG L+A RA +AWLWSRRR VVAG S Sbjct 4 PFIGSEAVASGLVTPYALRSRFVRVHPDVYVPAGTALSAGLRARSAWLWSRRRGVVAGRS 63 Query 67 AAALLGAKWVNPALDAELVHANRKPPPRIVVHTDRLAPHETVAVDGVAVTTPARTAFDIG 126 AAAL G KW++ A+L++ R+PP I +DRL E + G+ VTTPARTA DI Sbjct 64 AAALYGTKWIDDRAPAQLLYPYRRPPDGIQTWSDRLVGDEIQTIGGMPVTTPARTALDIA 123 Query 127 RRTPSRLQAVQRLDALANSTDVKVADVQAVIAEHTGARGLVRLRAVLPLIDGGAESPQET 186 R+P +AV +DALA +T++KV +++ + + G RG+ R R VLPL+D GAESP+ET Sbjct 124 CRSPVD-KAVAAIDALARATELKVLEIELLADRYRGRRGITRARNVLPLVDAGAESPRET 182 Query 187 WTRLVLIDAGLPKPQTQIRVFDDYGDFVARIDLGYEQLRVGVEYDGPQHWTDPAQRARDI 246 W RL+L+ AG P+P+TQ+ V YG +A +D+G+E +++ VEYDG QH TD Q +DI Sbjct 183 WLRLLLLRAGFPRPRTQLPV-RQYGALIACLDMGWEDIKLAVEYDGDQHRTDRRQFTKDI 241 Query 247 ERSTALLDLGWTIIRVTSE 265 R+ L +LGWT++RVT+E Sbjct 242 RRAEVLAELGWTVVRVTAE 260 >gi|108797618|ref|YP_637815.1| hypothetical protein Mmcs_0638 [Mycobacterium sp. MCS] gi|119866705|ref|YP_936657.1| hypothetical protein Mkms_0651 [Mycobacterium sp. KMS] gi|108768037|gb|ABG06759.1| hypothetical protein Mmcs_0638 [Mycobacterium sp. MCS] gi|119692794|gb|ABL89867.1| conserved hypothetical protein [Mycobacterium sp. KMS] Length=284 Score = 238 bits (608), Expect = 6e-61, Method: Compositional matrix adjust. Identities = 130/279 (47%), Positives = 174/279 (63%), Gaps = 1/279 (0%) Query 8 VLGSEVLAAKAIPERAMRQLYEPVYPGVYAPAGVELTARQRAHAAWLWSRRRAVVAGNSA 67 ++ +E L + + R +R+ Y VY VY G++LTA RA AAWLWS RRA + G+ A Sbjct 6 IIATEALESGELTRRDLRRRYTMVYRNVYIRNGLQLTAEDRARAAWLWSGRRATLTGHCA 65 Query 68 AALLGAKWVNPALDAELVHANRKPPPRIVVHTDRLAPHETVAVDGVAVTTPARTAFDIGR 127 AALLG++W+ P E+ H R ++ + +E VDG+ TT ARTA+D+GR Sbjct 66 AALLGSRWIPPDAPVEIAHTRRPAARGMIARCNTFHDNEVCVVDGIRCTTVARTAYDLGR 125 Query 128 RTPSRLQAVQRLDALANSTDVKVADVQAVIAEHTGARGLVRLRAVLPLIDGGAESPQETW 187 R ++ V R+DAL N+T V + V AV A H GARG+ RLR L L+D GAESPQET Sbjct 126 RLTEQMGVV-RIDALLNATGVAPSTVAAVAARHPGARGIRRLRKTLTLVDAGAESPQETR 184 Query 188 TRLVLIDAGLPKPQTQIRVFDDYGDFVARIDLGYEQLRVGVEYDGPQHWTDPAQRARDIE 247 RL++I +GLP+P TQI V ++ G V RID+G+ VG+EYDG QH+T+P A DIE Sbjct 185 LRLLIIRSGLPRPVTQIPVHNELGRVVRRIDMGWPDAMVGIEYDGEQHFTNPDDYAADIE 244 Query 248 RSTALLDLGWTIIRVTSELLWYRRGTFVGRVDAAMRAAG 286 R L GW I+RV++ L YRR + RV AA RA G Sbjct 245 RLEFLAARGWLIVRVSATQLRYRRAEIIDRVTAARRAHG 283 >gi|118470374|ref|YP_890143.1| hypothetical protein MSMEG_5917 [Mycobacterium smegmatis str. MC2 155] gi|118171661|gb|ABK72557.1| conserved hypothetical protein [Mycobacterium smegmatis str. MC2 155] Length=282 Score = 238 bits (607), Expect = 8e-61, Method: Compositional matrix adjust. Identities = 129/259 (50%), Positives = 169/259 (66%), Gaps = 1/259 (0%) Query 7 PVLGSEVLAAKAIPERAMRQLYEPVYPGVYAPAGVELTARQRAHAAWLWSRRRAVVAGNS 66 PV+G+E +AA +R Y PVYPG+Y P + TA RA AAWLWS RRAV+AG S Sbjct 4 PVIGTEAVAAGFATPYQLRSRYWPVYPGIYVPKDTQPTAALRAKAAWLWSDRRAVLAGRS 63 Query 67 AAALLGAKWVNPALDAELVHANRKPPPRIVVHTDRLAPHETVAVDGVAVTTPARTAFDIG 126 A+AL ++W++P AEL+H NR+PP I DR E VDG+ VTTPARTA D+ Sbjct 64 ASALHRSRWLDPRAPAELIHDNRRPPCGIKTWLDRFEDDEITVVDGIRVTTPARTAVDLA 123 Query 127 RRTPSRLQAVQRLDALANSTDVKVADVQAVIAEHTGARGLVRLRAVLPLIDGGAESPQET 186 R P AV +DAL N+T +K+ADV+ ++ + G RG+ R VL L+DGGAESP+ET Sbjct 124 CRYPLD-TAVTLIDALGNATRLKMADVELLVDRYRGRRGIKNARHVLDLVDGGAESPRET 182 Query 187 WTRLVLIDAGLPKPQTQIRVFDDYGDFVARIDLGYEQLRVGVEYDGPQHWTDPAQRARDI 246 W RL +I G P+PQTQI V D+YG V D+G+E VG++Y+G QH TD + RDI Sbjct 183 WLRLEVIRGGFPRPQTQIPVHDEYGVLVGVFDMGWEDAMVGLDYEGDQHRTDRRRFNRDI 242 Query 247 ERSTALLDLGWTIIRVTSE 265 +S + LGWT IRVT++ Sbjct 243 HKSEDVRRLGWTHIRVTAQ 261 >gi|118468502|ref|YP_885317.1| hypothetical protein MSMEG_0914 [Mycobacterium smegmatis str. MC2 155] gi|118169789|gb|ABK70685.1| conserved hypothetical protein [Mycobacterium smegmatis str. MC2 155] Length=290 Score = 237 bits (604), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 135/278 (49%), Positives = 170/278 (62%), Gaps = 1/278 (0%) Query 8 VLGSEVLAAKAIPERAMRQLYEPVYPGVYAPAGVELTARQRAHAAWLWSRRRAVVAGNSA 67 ++GSE L++ + A++ Y ++ VY P L AR RA AAWLWS R A +AG SA Sbjct 5 IVGSEALSSGVLTRYALQTSYRKLHRNVYVPRDFSLDARSRARAAWLWSGRTATLAGYSA 64 Query 68 AALLGAKWVNPALDAELVHANRKPPPRIVVHTDRLAPHETVAVDGVAVTTPARTAFDIGR 127 AA+LG++W+ AEL P I +HT +A E V G+ TTPARTA+D+GR Sbjct 65 AAMLGSRWLPDDAPAELARVRHPSPAGIRIHTGVIADDEICRVGGMDCTTPARTAYDLGR 124 Query 128 RTPSRLQAVQRLDALANSTDVKVADVQAVIAEHTGARGLVRLRAVLPLIDGGAESPQETW 187 R P A+ RLDAL N+T VADV +V + GARG+ RLR L L+D GAESPQET Sbjct 125 RLPVETGAI-RLDALLNATKTDVADVMSVAERYRGARGIRRLRTTLDLVDPGAESPQETR 183 Query 188 TRLVLIDAGLPKPQTQIRVFDDYGDFVARIDLGYEQLRVGVEYDGPQHWTDPAQRARDIE 247 RLVL+ AGLP+P TQI V D+ G RID+G+ VG EYDG HW DPA A DI+ Sbjct 184 LRLVLVRAGLPRPVTQIPVLDERGRVRRRIDMGWPDRMVGAEYDGAHHWQDPAAHASDID 243 Query 248 RSTALLDLGWTIIRVTSELLWYRRGTFVGRVDAAMRAA 285 R L GWTIIRV+ E L YR + RV A++ A Sbjct 244 RLEFLAAPGWTIIRVSHEHLRYRTPAVIARVRDALKCA 281 >gi|126433242|ref|YP_001068933.1| hypothetical protein Mjls_0631 [Mycobacterium sp. JLS] gi|126233042|gb|ABN96442.1| conserved hypothetical protein [Mycobacterium sp. JLS] Length=284 Score = 236 bits (603), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 129/279 (47%), Positives = 174/279 (63%), Gaps = 1/279 (0%) Query 8 VLGSEVLAAKAIPERAMRQLYEPVYPGVYAPAGVELTARQRAHAAWLWSRRRAVVAGNSA 67 ++ +E L + + R +R+ Y VY VY G++LTA RA AAWLWS RRA + G+ A Sbjct 6 IIATEALESGELTRRDLRRRYTMVYRNVYIRNGLQLTAEDRARAAWLWSGRRATLTGHCA 65 Query 68 AALLGAKWVNPALDAELVHANRKPPPRIVVHTDRLAPHETVAVDGVAVTTPARTAFDIGR 127 AALLG++W+ P E+ H R ++ + +E VDG+ TT ARTA+D+GR Sbjct 66 AALLGSRWIPPDAPVEIAHTRRPAARGMIARCNTFHDNEVCVVDGIRCTTVARTAYDLGR 125 Query 128 RTPSRLQAVQRLDALANSTDVKVADVQAVIAEHTGARGLVRLRAVLPLIDGGAESPQETW 187 R ++ V R+DAL N+T V + V AV A H GARG+ RLR L L+D GAESPQET Sbjct 126 RLTEQMGVV-RIDALLNATGVAPSTVAAVAARHPGARGIRRLRKTLTLVDAGAESPQETR 184 Query 188 TRLVLIDAGLPKPQTQIRVFDDYGDFVARIDLGYEQLRVGVEYDGPQHWTDPAQRARDIE 247 RL++I +GLP+P TQI V ++ G V RID+G+ VG+EYDG QH+T+P A DIE Sbjct 185 LRLLIIRSGLPRPVTQIPVHNELGRVVRRIDMGWPDAMVGIEYDGEQHFTNPDDYAADIE 244 Query 248 RSTALLDLGWTIIRVTSELLWYRRGTFVGRVDAAMRAAG 286 R L GW I+RV++ L +RR + RV AA RA G Sbjct 245 RLEFLAARGWLIVRVSATQLRHRRAEIIDRVTAARRAHG 283 >gi|289763695|ref|ZP_06523073.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 1503] gi|289711201|gb|EFD75217.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 1503] Length=280 Score = 232 bits (592), Expect = 5e-59, Method: Compositional matrix adjust. Identities = 131/276 (48%), Positives = 179/276 (65%), Gaps = 5/276 (1%) Query 7 PVLGSEVLAAKAIPERAMRQLYEPVYPGVYAPAGVELTARQRA-HAAWLWSRRRAVVAGN 65 P LGSE +A+ A+ +R Y ++P VY G +LTA + A AWLWSR V+AG Sbjct 4 PFLGSEAIASGALTRHRLRSAYATIHPDVYVSPGADLTAWKSAPQPAWLWSRGGGVIAGK 63 Query 66 SAAALLGAKWVNPALDAELVHANRKPPPRIVVHTDRLAPHETVAVDGVAVTTPARTAFDI 125 SAAA+ GAKWV+ AEL++ +R+ P I +DR+A E + G+ TTPARTA D+ Sbjct 64 SAAAMHGAKWVDARKGAELLYDHRRRPAGIHTWSDRVADDEIQPISGMNTTTPARTALDL 123 Query 126 GRRTPSRLQAVQRLDALANSTDVKVADVQAVIAEHTGARGLVRLRAVLPLIDGGAESPQE 185 RR P +AV +DALA +TD+K+ADV+ + + G+RG+ R L L+D GAESP+E Sbjct 124 ARRYPVG-KAVAAIDALARATDLKLADVEMLAERYRGSRGIRNARIALDLVDPGAESPRE 182 Query 186 TWTRLVLIDAGLPKPQTQIRVFDDYGDFVARIDLGYEQLRVGVEYDGPQHWTDPAQRARD 245 TW RL+LI AG P+PQTQI V+D+YG VA ID+G+ ++VGV+Y+G H TD +D Sbjct 183 TWLRLLLIRAGFPRPQTQIPVYDEYGQLVAVIDMGWAGIKVGVDYEGDHHRTDRRTFNKD 242 Query 246 IERSTALLDLGWTIIRVTSELLWYRRGTFVGRVDAA 281 I+R+ AL +LGWT +RVT E G + RV AA Sbjct 243 IKRAEALTELGWTDVRVTVEDT---EGGIIWRVSAA 275 >gi|296170707|ref|ZP_06852282.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295894696|gb|EFG74430.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length=281 Score = 230 bits (587), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 125/256 (49%), Positives = 162/256 (64%), Gaps = 1/256 (0%) Query 7 PVLGSEVLAAKAIPERAMRQLYEPVYPGVYAPAGVELTARQRAHAAWLWSRRRAVVAGNS 66 P +GSE +A + + A+R Y ++ VY G ELT RA AAWLWSRRR +VAG S Sbjct 4 PFIGSEAVANGELVKSALRTRYRKLFRDVYVDPGAELTPLIRARAAWLWSRRRGIVAGLS 63 Query 67 AAALLGAKWVNPALDAELVHANRKPPPRIVVHTDRLAPHETVAVDGVAVTTPARTAFDIG 126 AAA+ GA+WV+ A E++H+NR P P + +H+DRL E +DGV VTTPARTA D+G Sbjct 64 AAAVHGAQWVDAAAPVEMLHSNRNPLPGLRIHSDRLEDDEFTLIDGVPVTTPARTAVDVG 123 Query 127 RRTPSRLQAVQRLDALANSTDVKVADVQAVIAEHTGARGLVRLRAVLPLIDGGAESPQET 186 P+ AV +D L +TD KVA++Q + H G RG+ R + L D GA+SP+ET Sbjct 124 CWHPTN-DAVAAIDDLLRATDSKVAELQMLAERHPGRRGIQSARDAINLADAGAQSPKET 182 Query 187 WTRLVLIDAGLPKPQTQIRVFDDYGDFVARIDLGYEQLRVGVEYDGPQHWTDPAQRARDI 246 W RL+LI AGLP+PQTQI V D+ GD +D+G+E +V EYDG QH D Q DI Sbjct 183 WVRLLLIRAGLPRPQTQIPVSDECGDLTYYLDMGWEDCKVAAEYDGEQHRRDRWQYTWDI 242 Query 247 ERSTALLDLGWTIIRV 262 R L LGW +IRV Sbjct 243 RRRETLERLGWIVIRV 258 >gi|118468415|ref|YP_885190.1| hypothetical protein MSMEG_0785 [Mycobacterium smegmatis str. MC2 155] gi|118169702|gb|ABK70598.1| conserved hypothetical protein [Mycobacterium smegmatis str. MC2 155] Length=289 Score = 230 bits (586), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 130/259 (51%), Positives = 167/259 (65%), Gaps = 1/259 (0%) Query 7 PVLGSEVLAAKAIPERAMRQLYEPVYPGVYAPAGVELTARQRAHAAWLWSRRRAVVAGNS 66 P LGSE LA + +R + +YP VY P E T QR AWLWS RRAV+AG + Sbjct 4 PFLGSEALADGTLNRHQLRTRFRTLYPNVYVPKTSEPTLEQRTVGAWLWSGRRAVIAGPA 63 Query 67 AAALLGAKWVNPALDAELVHANRKPPPRIVVHTDRLAPHETVAVDGVAVTTPARTAFDIG 126 AAAL GAKW++P++ +L+H N + P I D L P ETV + G+ +T+ ARTAFDIG Sbjct 64 AAALHGAKWIDPSIPIDLIHDNPRQPRGITTRRDTLLPGETVVIGGMLLTSSARTAFDIG 123 Query 127 RRTPSRLQAVQRLDALANSTDVKVADVQAVIAEHTGARGLVRLRAVLPLIDGGAESPQET 186 RR+P+ + V LDAL +T VAD+ + H GARGL RL A LPL+D GA+SP+ET Sbjct 124 RRSPTN-RGVAHLDALLRATGCTVADIADLANRHRGARGLRRLEATLPLVDAGAQSPKET 182 Query 187 WTRLVLIDAGLPKPQTQIRVFDDYGDFVARIDLGYEQLRVGVEYDGPQHWTDPAQRARDI 246 W RL+++ GLPKP TQI V D G +A +D+G+E+ V VEYDG QH TD Q RDI Sbjct 183 WLRLLIVRDGLPKPTTQIPVLADDGTPLAYLDMGWEEWMVAVEYDGDQHRTDRRQYVRDI 242 Query 247 ERSTALLDLGWTIIRVTSE 265 R L +LGW +IRV +E Sbjct 243 RRLELLAELGWIVIRVVAE 261 >gi|289572169|ref|ZP_06452396.1| conserved hypothetical protein [Mycobacterium tuberculosis K85] gi|289536600|gb|EFD41178.1| conserved hypothetical protein [Mycobacterium tuberculosis K85] Length=281 Score = 230 bits (586), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 127/249 (52%), Positives = 168/249 (68%), Gaps = 4/249 (1%) Query 33 PGVYAPAGVELTARQRAHAAWLWSRRRAVVAGNSAAALLGAKWVNPALDAELVHANRKPP 92 P VY G +LTA RA AAWLWSRRR V+AG SAAA+ GAKWV+ AEL++ +R+PP Sbjct 32 PDVYVSPGADLTAWSRAQAAWLWSRRRGVIAGQSAAAMHGAKWVDARQAAELLYDHRRPP 91 Query 93 PRIVVHTDRLAPHETVAVDGVAVTTPARTAFDIGRRTPSRLQAVQRLDALANSTDVKVAD 152 I +DR+A E + G+ TTPARTA D+ RR P +AV +DALA +TD+K+AD Sbjct 92 AGIHTWSDRVADDEIQPISGMNTTTPARTALDLARRYPVG-KAVAAIDALARATDLKLAD 150 Query 153 VQAVIAEHTGARGLVRLRAVLPLIDGGAESPQETWTRLVLIDAGLPKPQTQIRVFDDYGD 212 V+ + + G+RG+ R L L+D GAESP+ETW RL+LI AG P+PQTQI V+D+YG Sbjct 151 VEMLAERYRGSRGIRNARIALDLVDPGAESPRETWLRLLLIRAGFPRPQTQIPVYDEYGQ 210 Query 213 FVARIDLGYEQLRVGVEYDGPQHWTDPAQRARDIERSTALLDLGWTIIRVTSELLWYRRG 272 VA ID+G+ ++VGV+Y+G H TD +DI+R+ AL +LGWT +RVT E G Sbjct 211 LVAVIDMGWAGIKVGVDYEGDHHRTDRRTFNKDIKRAEALTELGWTDVRVTVEDT---EG 267 Query 273 TFVGRVDAA 281 + RV AA Sbjct 268 GIIWRVSAA 276 >gi|183984625|ref|YP_001852916.1| hypothetical protein MMAR_4658 [Mycobacterium marinum M] gi|183177951|gb|ACC43061.1| conserved hypothetical protein [Mycobacterium marinum M] Length=284 Score = 229 bits (585), Expect = 3e-58, Method: Compositional matrix adjust. Identities = 132/282 (47%), Positives = 175/282 (63%), Gaps = 2/282 (0%) Query 1 MDELPWPVLGSEVLAAKAIPERAMRQLYEPVYPGVYAPAGVELTARQRAHAAWLWSRRRA 60 M+ L WP G+E LAA A+ +R +E V+ VY P G +LTA RA AAWLWS R A Sbjct 1 MEILDWPFRGTEALAAGAVTPHRLRTHFEMVHRNVYIPRGKKLTAVTRAIAAWLWSGRSA 60 Query 61 VVAGNSAAALLGAKWVNPALDAELVHANRKPPPRIVVHTDRLAPHETVAVDGVAVTTPAR 120 G SAAAL W++ L AEL R I+ H+ L E DG+A+TTPAR Sbjct 61 TAVGLSAAALHRTGWIDDWLPAELNRRGRDKARGIISHSACLDEDEVCVRDGIALTTPAR 120 Query 121 TAFDIGRRTPSRLQAVQRLDALANSTDVKVADVQAVIAEHTGARGLVRLRAVLPLIDGGA 180 TAFD+GRR AV RLDAL +T++KVADV+ + H GARGL++LR LPL+D GA Sbjct 121 TAFDLGRR-KGLTTAVIRLDALTRATELKVADVEMLAERHRGARGLIQLRQALPLVDAGA 179 Query 181 ESPQETWTRLVLIDAGLPKPQTQIRVFDDYGDFVARIDLGYEQLRVGVEYDGPQHWTDPA 240 +SP ET RL++I +GLP PQT+I+V DD+G ARI +G+ + +VGVE+D W + A Sbjct 180 DSPYETRIRLLVIRSGLPAPQTEIKVLDDWGAVAARIGMGWPECKVGVEFDSAGQWNNAA 239 Query 241 QRARDIERSTALLDLGWTIIRVTSELLWYRRGTFVGRVDAAM 282 R+ ++RS L GWTI+RV ++ L R V +V A+ Sbjct 240 -RSDAVDRSAELEARGWTIVRVNAQTLKNRPDIVVAQVRHAL 280 >gi|41406626|ref|NP_959462.1| hypothetical protein MAP0528 [Mycobacterium avium subsp. paratuberculosis K-10] gi|41394975|gb|AAS02845.1| hypothetical protein MAP_0528 [Mycobacterium avium subsp. paratuberculosis K-10] Length=279 Score = 226 bits (575), Expect = 4e-57, Method: Compositional matrix adjust. Identities = 126/258 (49%), Positives = 161/258 (63%), Gaps = 1/258 (0%) Query 7 PVLGSEVLAAKAIPERAMRQLYEPVYPGVYAPAGVELTARQRAHAAWLWSRRRAVVAGNS 66 P LGSE +A + + Y ++ VY E+TA RA A WLWS RRAVVAG S Sbjct 4 PFLGSEAVARGVLTRSRLSTGYTRLFRDVYVSRDDEVTAVLRARAGWLWSGRRAVVAGFS 63 Query 67 AAALLGAKWVNPALDAELVHANRKPPPRIVVHTDRLAPHETVAVDGVAVTTPARTAFDIG 126 AAAL G+KWV+ +L+H NR P I VH DR+ E VDG+ VT+ ARTA D+G Sbjct 64 AAALHGSKWVDAMTVVDLIHHNRYRQPGIRVHGDRIEEDEITVVDGILVTSAARTALDLG 123 Query 127 RRTPSRLQAVQRLDALANSTDVKVADVQAVIAEHTGARGLVRLRAVLPLIDGGAESPQET 186 P+ AV +DALA T +K ADV+ + + G RG+VR R + L DGG++SP+E+ Sbjct 124 CWYPT-TAAVAGIDALARETRIKAADVELLAQRYPGRRGIVRAREAIALFDGGSQSPKES 182 Query 187 WTRLVLIDAGLPKPQTQIRVFDDYGDFVARIDLGYEQLRVGVEYDGPQHWTDPAQRARDI 246 W R+VL AGLP PQTQIRV DD GD VA +D+G+E L+V VEYDG H +D Q DI Sbjct 183 WLRVVLTQAGLPPPQTQIRVVDDLGDPVAYLDMGWEDLKVAVEYDGDHHRSDRRQYGWDI 242 Query 247 ERSTALLDLGWTIIRVTS 264 RS L LGW ++RV + Sbjct 243 RRSEMLQRLGWIVVRVVA 260 >gi|41406646|ref|NP_959482.1| hypothetical protein MAP0548c [Mycobacterium avium subsp. paratuberculosis K-10] gi|41394995|gb|AAS02865.1| hypothetical protein MAP_0548c [Mycobacterium avium subsp. paratuberculosis K-10] gi|336458435|gb|EGO37409.1| hypothetical protein MAPs_13300 [Mycobacterium avium subsp. paratuberculosis S397] Length=290 Score = 225 bits (574), Expect = 6e-57, Method: Compositional matrix adjust. Identities = 126/259 (49%), Positives = 177/259 (69%), Gaps = 2/259 (0%) Query 7 PVLGSEVLAAKAIPERAMRQLYEPVYPGVYAPAGVELTARQRAHAAWLWSRRRAVVAGNS 66 P +GSE +A+ + A+R + V+P VY PAG L+A RA +AWLWSRRR VVAG S Sbjct 4 PFIGSEAVASGLVTPYALRSRFVRVHPDVYVPAGTALSAGLRARSAWLWSRRRGVVAGRS 63 Query 67 AAALLGAKWVNPALDAELVHANRKPPPRIVVHTDRLAPHETVAVDGVAVTTPARTAFDIG 126 AAAL G KW++ A+L++ R+PP I +DRL E + G+ VTTPARTA DI Sbjct 64 AAALYGTKWIDDRAPAQLLYPYRRPPDGIQTWSDRLVGDEIQTIGGMPVTTPARTALDIA 123 Query 127 RRTPSRLQAVQRLDALANSTDVKVADVQAVIAEHTGARGLVRLRAVLPLIDGGAESPQET 186 R+P +AV +DALA +T++KV +++ + + G RG+ R R+VLPL+D GAESP+ET Sbjct 124 CRSPVD-KAVAAIDALARATELKVLEIELLADRYRGRRGITRGRSVLPLVDAGAESPRET 182 Query 187 WTRLVLIDAGLPKPQTQIRVFDDYGDFVARIDLGYEQLRVGVEYDGPQHWTDPAQRARDI 246 W RL+L+ AG P+P+TQ+ V YG +A +D+G+E +++ VEYDG QH TD Q +DI Sbjct 183 WLRLLLLRAGFPRPRTQLPV-RQYGALIACLDMGWEDIKLAVEYDGDQHRTDRRQFTKDI 241 Query 247 ERSTALLDLGWTIIRVTSE 265 R+ L +LGWT++RVT+E Sbjct 242 RRAEVLAELGWTVVRVTAE 260 >gi|118467074|ref|YP_882533.1| hypothetical protein MAV_3351 [Mycobacterium avium 104] gi|118168361|gb|ABK69258.1| conserved hypothetical protein [Mycobacterium avium 104] Length=283 Score = 224 bits (570), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 128/276 (47%), Positives = 168/276 (61%), Gaps = 4/276 (1%) Query 7 PVLGSEVLAAKAIPERAMRQLYEPVYPGVYAPAGVELTARQRAHAAWLWSRRRAVVAGNS 66 P +GSE +A + + A+R Y+ ++ VY G EL+A RA A WLWSRRR V+AG S Sbjct 4 PFIGSEAVADGEVVKSALRTRYKRLFRDVYIHPGAELSALTRARAGWLWSRRRGVIAGLS 63 Query 67 AAALLGAKWVNPALDAELVHANRKPPPRIVVHTDRLAPHETVAVDGVAVTTPARTAFDIG 126 AAA+ GA+WV+ E++H+NR P P + +H+DRL E VDGV VTTPARTA D+G Sbjct 64 AAAVHGARWVDATAPLEILHSNRNPLPGLRIHSDRLESDEYALVDGVPVTTPARTAVDLG 123 Query 127 RRTPSRLQAVQRLDALANSTDVKVADVQAVIAEHTGARGLVRLRAVLPLIDGGAESPQET 186 P AV +D L +TD KVA+ Q + + G RG+ RA + L D GA+SP+ET Sbjct 124 CWHPVN-DAVAVIDDLLRATDCKVAECQLLADRYPGRRGMQSARAAIGLADAGAQSPKET 182 Query 187 WTRLVLIDAGLPKPQTQIRVFDDYGDFVARIDLGYEQLRVGVEYDGPQHWTDPAQRARDI 246 W RL+LI AGLP+PQTQI V D++G +D+G+E V EYDG QH D Q DI Sbjct 183 WLRLLLIRAGLPRPQTQIPVSDEFGGVTYYLDMGWEDFMVAAEYDGEQHRRDRWQYTWDI 242 Query 247 ERSTALLDLGWTIIRVTSELLWYRRGTFVGRVDAAM 282 R L LGW +I+V + R V RV AA+ Sbjct 243 RRRETLERLGWIVIQVVAG---DRPADIVSRVSAAL 275 >gi|240173343|ref|ZP_04752001.1| hypothetical protein MkanA1_28781 [Mycobacterium kansasii ATCC 12478] Length=281 Score = 224 bits (570), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 129/282 (46%), Positives = 174/282 (62%), Gaps = 5/282 (1%) Query 8 VLGSEVLAAKAIPERAMRQLYEPVYPGVYAPAGVELTARQRAHAAWLWSRRRAVVAGNSA 67 +GSE +++ + +++ Y VYPGVYAP ++ R R AWLWS RRAV+AG +A Sbjct 5 FIGSEAVSSSKVTRHELQRWYRRVYPGVYAPQQHNMSLRDRTIGAWLWSGRRAVIAGVAA 64 Query 68 AALLGAKWVNPALDAELVHANRKPPPRIVVHTDRLAPHETVAVDGVAVTTPARTAFDIGR 127 +AL GA+W++ + EL+ N +PP +V + LA E V G+ VTT ARTA+D+GR Sbjct 65 SALHGAQWIDDDVAIELIWCNIRPPRGLVARDEVLADDEITRVVGLPVTTLARTAYDLGR 124 Query 128 RTPSRLQAVQRLDALANSTDVKVADVQAVIAEHTGARGLVRLRAVLPLIDGGAESPQETW 187 R QAV RLDAL +T DV + + GARG+ RL+AVLPL+D GA SP+ETW Sbjct 125 HL-RRGQAVARLDALMRATPFSTEDVLLLAKRYPGARGVRRLQAVLPLVDAGAASPRETW 183 Query 188 TRLVLIDAGLPKPQTQIRVFDDYGDFVARIDLGYEQLRVGVEYDGPQHWTDPAQRARDIE 247 RL+LIDAG P P TQ+ V D+ +A +D+G+E+ +V EYDG QH TD + A D Sbjct 184 LRLLLIDAGFPTPSTQLPVQKDW-RLIAMLDMGWEKYQVAAEYDGDQHRTDRRRYAHDQR 242 Query 248 RSTALLDLGWTIIRVTSELLWYRRGTFVGRVDAAMRAAGWRP 289 R L LGW +IRV +E R + RV A+ A GWRP Sbjct 243 RLRTLAQLGWLVIRVIAE---DRSEEVIARVRNALLARGWRP 281 >gi|108801239|ref|YP_641436.1| hypothetical protein Mmcs_4275 [Mycobacterium sp. MCS] gi|119870390|ref|YP_940342.1| hypothetical protein Mkms_4361 [Mycobacterium sp. KMS] gi|108771658|gb|ABG10380.1| conserved hypothetical protein [Mycobacterium sp. MCS] gi|119696479|gb|ABL93552.1| conserved hypothetical protein [Mycobacterium sp. KMS] Length=289 Score = 224 bits (570), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 122/258 (48%), Positives = 161/258 (63%), Gaps = 1/258 (0%) Query 8 VLGSEVLAAKAIPERAMRQLYEPVYPGVYAPAGVELTARQRAHAAWLWSRRRAVVAGNSA 67 +LGSE + + + +R Y ++P VY PA E + AWLWS+RRAV+ G +A Sbjct 5 ILGSEAIDRGEVSRQGLRSAYRTIFPDVYIPAVAEPSLYANTVGAWLWSKRRAVITGKAA 64 Query 68 AALLGAKWVNPALDAELVHANRKPPPRIVVHTDRLAPHETVAVDGVAVTTPARTAFDIGR 127 AAL GA+WV+ EL+ N +PP IV DR E V + G+AV + RTAFD+GR Sbjct 65 AALHGAEWVDENSPVELIWRNNRPPHGIVTRNDRFTCDEVVEIYGLAVASIQRTAFDLGR 124 Query 128 RTPSRLQAVQRLDALANSTDVKVADVQAVIAEHTGARGLVRLRAVLPLIDGGAESPQETW 187 P R +AV LDALA +T + V V + ++ GARG+ R R L L+DGGA+SP+ETW Sbjct 125 FLP-RGEAVAHLDALARATGLAVDHVLPLAEQYRGARGVRRCREALGLMDGGAQSPRETW 183 Query 188 TRLVLIDAGLPKPQTQIRVFDDYGDFVARIDLGYEQLRVGVEYDGPQHWTDPAQRARDIE 247 RL+LIDAG P+P TQI V DDYGD A +D+G+E+L + VEYDG QH D ++ D + Sbjct 184 LRLLLIDAGFPRPTTQIPVLDDYGDPFAHLDMGWERLMIAVEYDGKQHQIDRSRYVWDHK 243 Query 248 RSTALLDLGWTIIRVTSE 265 R T L GW IRV SE Sbjct 244 RLTMLRRRGWLHIRVISE 261 >gi|336458416|gb|EGO37390.1| hypothetical protein MAPs_13110 [Mycobacterium avium subsp. paratuberculosis S397] Length=279 Score = 223 bits (569), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 125/258 (49%), Positives = 160/258 (63%), Gaps = 1/258 (0%) Query 7 PVLGSEVLAAKAIPERAMRQLYEPVYPGVYAPAGVELTARQRAHAAWLWSRRRAVVAGNS 66 P LGSE +A + + Y ++ VY E+TA RA A WLWS RRAVVAG S Sbjct 4 PFLGSEAVARGVLTRSRLSTGYTRLFRDVYVSRDDEVTAVLRARAGWLWSGRRAVVAGFS 63 Query 67 AAALLGAKWVNPALDAELVHANRKPPPRIVVHTDRLAPHETVAVDGVAVTTPARTAFDIG 126 AAAL G+KWV+ +L+H NR P I VH DR+ E VDG+ VT+ ARTA D+G Sbjct 64 AAALHGSKWVDAMTVVDLIHHNRYRQPGIRVHGDRIEEDEITVVDGILVTSAARTALDLG 123 Query 127 RRTPSRLQAVQRLDALANSTDVKVADVQAVIAEHTGARGLVRLRAVLPLIDGGAESPQET 186 P+ AV +DALA T +K ADV+ + + G RG+VR R + L DGG++SP+E+ Sbjct 124 CWYPT-TAAVAGIDALARETRIKAADVELLAQRYPGRRGIVRAREAIALFDGGSQSPKES 182 Query 187 WTRLVLIDAGLPKPQTQIRVFDDYGDFVARIDLGYEQLRVGVEYDGPQHWTDPAQRARDI 246 W R+VL GLP PQTQIRV DD GD VA +D+G+E L+V VEYDG H +D Q DI Sbjct 183 WLRVVLPQGGLPPPQTQIRVVDDLGDPVAYLDMGWEDLKVAVEYDGDHHRSDRRQYGWDI 242 Query 247 ERSTALLDLGWTIIRVTS 264 RS L LGW ++RV + Sbjct 243 RRSEMLQRLGWIVVRVVA 260 Lambda K H 0.321 0.135 0.419 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 470845709104 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40