BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv3557c
Length=200
Score E
Sequences producing significant alignments: (Bits) Value
gi|15610693|ref|NP_218074.1| TetR family transcriptional regulat... 409 1e-112
gi|339299977|gb|AEJ52087.1| TetR family transcriptional regulato... 402 2e-110
gi|296166592|ref|ZP_06849022.1| TetR family transcriptional regu... 374 3e-102
gi|254822640|ref|ZP_05227641.1| hypothetical protein MintA_22114... 371 4e-101
gi|240169771|ref|ZP_04748430.1| putative transcriptional regulat... 369 1e-100
gi|183985014|ref|YP_001853305.1| TetR family transcriptional reg... 368 2e-100
gi|41406607|ref|NP_959443.1| hypothetical protein MAP0509 [Mycob... 363 7e-99
gi|342862386|ref|ZP_08719026.1| hypothetical protein MCOL_25963 ... 357 6e-97
gi|118464357|ref|YP_879883.1| TetR family transcriptional regula... 355 1e-96
gi|118619302|ref|YP_907634.1| TetR family transcriptional regula... 343 1e-92
gi|126437640|ref|YP_001073331.1| TetR family transcriptional reg... 337 5e-91
gi|108801654|ref|YP_641851.1| TetR family transcriptional regula... 337 8e-91
gi|120406231|ref|YP_956060.1| TetR family transcriptional regula... 337 9e-91
gi|333992354|ref|YP_004524968.1| TetR family transcriptional reg... 318 3e-85
gi|118473595|ref|YP_890234.1| TetR family transcriptional regula... 316 1e-84
gi|145222075|ref|YP_001132753.1| TetR family transcriptional reg... 314 5e-84
gi|169627702|ref|YP_001701351.1| TetR family transcriptional reg... 276 9e-73
gi|325674925|ref|ZP_08154612.1| TetR family transcriptional regu... 251 3e-65
gi|326384056|ref|ZP_08205739.1| regulatory protein TetR [Gordoni... 251 3e-65
gi|312138171|ref|YP_004005507.1| tetr family transcriptional reg... 251 4e-65
gi|54022453|ref|YP_116695.1| putative transcriptional regulator ... 244 7e-63
gi|343928262|ref|ZP_08767716.1| putative TetR family transcripti... 242 2e-62
gi|226363953|ref|YP_002781735.1| TetR family transcriptional reg... 236 2e-60
gi|111021570|ref|YP_704542.1| transcriptional regulator [Rhodoco... 235 2e-60
gi|226304382|ref|YP_002764340.1| TetR family transcriptional reg... 234 4e-60
gi|118138314|pdb|2IBD|A Chain A, Crystal Structure Of Probable T... 232 3e-59
gi|262203847|ref|YP_003275055.1| TetR family transcriptional reg... 232 3e-59
gi|319947741|ref|ZP_08021947.1| putative TetR family transcripti... 231 5e-59
gi|296141504|ref|YP_003648747.1| TetR family transcriptional reg... 230 7e-59
gi|311744275|ref|ZP_07718079.1| TetR family transcriptional regu... 216 2e-54
gi|119716989|ref|YP_923954.1| regulatory protein TetR [Nocardioi... 215 4e-54
gi|333918618|ref|YP_004492199.1| regulatory protein TetR [Amycol... 209 2e-52
gi|256390569|ref|YP_003112133.1| TetR family transcriptional reg... 201 4e-50
gi|337769596|emb|CCB78309.1| TetR-family transcriptional regulat... 197 9e-49
gi|345011419|ref|YP_004813773.1| TetR family transcriptional reg... 196 2e-48
gi|291443923|ref|ZP_06583313.1| TetR-family transcriptional regu... 193 1e-47
gi|297155145|gb|ADI04857.1| TetR family transcriptional regulato... 193 1e-47
gi|239986975|ref|ZP_04707639.1| TetR family transcriptional regu... 193 1e-47
gi|302539964|ref|ZP_07292306.1| TetR family transcriptional regu... 192 2e-47
gi|302549245|ref|ZP_07301587.1| TetR-family transcriptional regu... 191 4e-47
gi|302533881|ref|ZP_07286223.1| TetR-family transcriptional regu... 191 5e-47
gi|326779938|ref|ZP_08239203.1| transcriptional regulator, TetR ... 191 6e-47
gi|182439286|ref|YP_001827005.1| TetR family transcriptional reg... 191 7e-47
gi|297198997|ref|ZP_06916394.1| TetR family transcriptional regu... 190 9e-47
gi|297194955|ref|ZP_06912353.1| TetR-family transcriptional regu... 190 1e-46
gi|326328935|ref|ZP_08195266.1| transcriptional regulator, TetR ... 188 3e-46
gi|29832740|ref|NP_827374.1| TetR family transcriptional regulat... 188 4e-46
gi|254387118|ref|ZP_05002391.1| TetR-family transcriptional regu... 188 4e-46
gi|312195765|ref|YP_004015826.1| TetR family transcriptional reg... 186 1e-45
gi|328881713|emb|CCA54952.1| Transcriptional factor in putative ... 186 2e-45
>gi|15610693|ref|NP_218074.1| TetR family transcriptional regulator [Mycobacterium tuberculosis
H37Rv]
gi|15843169|ref|NP_338206.1| TetR family transcriptional regulator [Mycobacterium tuberculosis
CDC1551]
gi|31794733|ref|NP_857226.1| TetR family transcriptional regulator [Mycobacterium bovis AF2122/97]
80 more sequence titles
gi|121639476|ref|YP_979700.1| TetR family transcriptional regulator [Mycobacterium bovis BCG
str. Pasteur 1173P2]
gi|148663420|ref|YP_001284943.1| TetR family transcriptional regulator [Mycobacterium tuberculosis
H37Ra]
gi|148824763|ref|YP_001289517.1| TetR family transcriptional regulator [Mycobacterium tuberculosis
F11]
gi|167969171|ref|ZP_02551448.1| hypothetical transcriptional regulatory protein, tetR-family
[Mycobacterium tuberculosis H37Ra]
gi|224991973|ref|YP_002646662.1| putative transcriptional regulatory protein [Mycobacterium bovis
BCG str. Tokyo 172]
gi|253800598|ref|YP_003033599.1| transcriptional regulator, tetR-family [Mycobacterium tuberculosis
KZN 1435]
gi|254234133|ref|ZP_04927457.1| hypothetical protein TBCG_03486 [Mycobacterium tuberculosis C]
gi|254366121|ref|ZP_04982165.1| hypothetical transcriptional regulatory protein (probably tetR-family)
[Mycobacterium tuberculosis str. Haarlem]
gi|254552664|ref|ZP_05143111.1| transcriptional regulator, tetR-family protein [Mycobacterium
tuberculosis '98-R604 INH-RIF-EM']
gi|289440986|ref|ZP_06430730.1| transcriptional regulator, tetR-family [Mycobacterium tuberculosis
T46]
gi|289445149|ref|ZP_06434893.1| transcriptional regulator, tetR-family [Mycobacterium tuberculosis
CPHL_A]
gi|289555822|ref|ZP_06445032.1| transcriptional regulator, tetR-family [Mycobacterium tuberculosis
KZN 605]
gi|289571799|ref|ZP_06452026.1| transcriptional regulator, tetR-family [Mycobacterium tuberculosis
T17]
gi|289572209|ref|ZP_06452436.1| transcriptional regulator, tetR-family [Mycobacterium tuberculosis
K85]
gi|289747394|ref|ZP_06506772.1| TetR-family transcriptional regulator [Mycobacterium tuberculosis
02_1987]
gi|289752270|ref|ZP_06511648.1| transcriptional regulator, tetR-family [Mycobacterium tuberculosis
T92]
gi|289755686|ref|ZP_06515064.1| TetR family transcriptional regulator [Mycobacterium tuberculosis
EAS054]
gi|289759713|ref|ZP_06519091.1| TetR family transcriptional regulator [Mycobacterium tuberculosis
T85]
gi|289763735|ref|ZP_06523113.1| transcriptional regulatory protein (probably tetR-family) [Mycobacterium
tuberculosis GM 1503]
gi|294993675|ref|ZP_06799366.1| transcriptional regulator, tetR-family protein [Mycobacterium
tuberculosis 210]
gi|297636229|ref|ZP_06954009.1| transcriptional regulator, tetR-family protein [Mycobacterium
tuberculosis KZN 4207]
gi|297733223|ref|ZP_06962341.1| transcriptional regulator, tetR-family protein [Mycobacterium
tuberculosis KZN R506]
gi|298527035|ref|ZP_07014444.1| hypothetical transcriptional regulatory protein, tetR-family
[Mycobacterium tuberculosis 94_M4241A]
gi|306777909|ref|ZP_07416246.1| transcriptional regulator, tetR-family [Mycobacterium tuberculosis
SUMu001]
gi|306778439|ref|ZP_07416776.1| transcriptional regulator, tetR-family [Mycobacterium tuberculosis
SUMu002]
gi|306786462|ref|ZP_07424784.1| transcriptional regulator, tetR-family [Mycobacterium tuberculosis
SUMu003]
gi|306790827|ref|ZP_07429149.1| transcriptional regulator, tetR-family [Mycobacterium tuberculosis
SUMu004]
gi|306791151|ref|ZP_07429453.1| transcriptional regulator, tetR-family [Mycobacterium tuberculosis
SUMu005]
gi|306795935|ref|ZP_07434237.1| transcriptional regulator, tetR-family [Mycobacterium tuberculosis
SUMu006]
gi|306801184|ref|ZP_07437852.1| transcriptional regulator, tetR-family [Mycobacterium tuberculosis
SUMu008]
gi|306805395|ref|ZP_07442063.1| transcriptional regulator, tetR-family [Mycobacterium tuberculosis
SUMu007]
gi|306969687|ref|ZP_07482348.1| transcriptional regulator, tetR-family [Mycobacterium tuberculosis
SUMu009]
gi|306974027|ref|ZP_07486688.1| transcriptional regulator, tetR-family [Mycobacterium tuberculosis
SUMu010]
gi|307081737|ref|ZP_07490907.1| transcriptional regulator, tetR-family [Mycobacterium tuberculosis
SUMu011]
gi|307086348|ref|ZP_07495461.1| transcriptional regulator, tetR-family [Mycobacterium tuberculosis
SUMu012]
gi|313660553|ref|ZP_07817433.1| transcriptional regulator, tetR-family protein [Mycobacterium
tuberculosis KZN V2475]
gi|339633555|ref|YP_004725197.1| TetR family transcriptional regulator [Mycobacterium africanum
GM041182]
gi|340628521|ref|YP_004746973.1| putative transcriptional regulatory protein [Mycobacterium canettii
CIPT 140010059]
gi|81671909|sp|P96839.1|KSTR2_MYCTU RecName: Full=HTH-type transcriptional repressor KstR2
gi|1877288|emb|CAB07159.1| PROBABLE TRANSCRIPTIONAL REGULATORY PROTEIN (PROBABLY TETR-FAMILY)
[Mycobacterium tuberculosis H37Rv]
gi|13883520|gb|AAK48020.1| transcriptional regulator, TetR family [Mycobacterium tuberculosis
CDC1551]
gi|31620330|emb|CAD95773.1| PROBABLE TRANSCRIPTIONAL REGULATORY PROTEIN (PROBABLY TETR-FAMILY)
[Mycobacterium bovis AF2122/97]
gi|121495124|emb|CAL73610.1| Probable transcriptional regulatory protein (probably tetR-family)
[Mycobacterium bovis BCG str. Pasteur 1173P2]
gi|124603801|gb|EAY61764.1| hypothetical protein TBCG_03486 [Mycobacterium tuberculosis C]
gi|134151633|gb|EBA43678.1| hypothetical transcriptional regulatory protein (probably tetR-family)
[Mycobacterium tuberculosis str. Haarlem]
gi|148507572|gb|ABQ75381.1| TetR-family transcriptional regulator [Mycobacterium tuberculosis
H37Ra]
gi|148723290|gb|ABR07915.1| hypothetical transcriptional regulatory protein, tetR-family
[Mycobacterium tuberculosis F11]
gi|224775088|dbj|BAH27894.1| putative transcriptional regulatory protein [Mycobacterium bovis
BCG str. Tokyo 172]
gi|253322101|gb|ACT26704.1| transcriptional regulator, tetR-family [Mycobacterium tuberculosis
KZN 1435]
gi|289413905|gb|EFD11145.1| transcriptional regulator, tetR-family [Mycobacterium tuberculosis
T46]
gi|289418107|gb|EFD15308.1| transcriptional regulator, tetR-family [Mycobacterium tuberculosis
CPHL_A]
gi|289440454|gb|EFD22947.1| transcriptional regulator, tetR-family [Mycobacterium tuberculosis
KZN 605]
gi|289536640|gb|EFD41218.1| transcriptional regulator, tetR-family [Mycobacterium tuberculosis
K85]
gi|289545553|gb|EFD49201.1| transcriptional regulator, tetR-family [Mycobacterium tuberculosis
T17]
gi|289687922|gb|EFD55410.1| TetR-family transcriptional regulator [Mycobacterium tuberculosis
02_1987]
gi|289692857|gb|EFD60286.1| transcriptional regulator, tetR-family [Mycobacterium tuberculosis
T92]
gi|289696273|gb|EFD63702.1| TetR family transcriptional regulator [Mycobacterium tuberculosis
EAS054]
gi|289711241|gb|EFD75257.1| transcriptional regulatory protein (probably tetR-family) [Mycobacterium
tuberculosis GM 1503]
gi|289715277|gb|EFD79289.1| TetR family transcriptional regulator [Mycobacterium tuberculosis
T85]
gi|298496829|gb|EFI32123.1| hypothetical transcriptional regulatory protein, tetR-family
[Mycobacterium tuberculosis 94_M4241A]
gi|308213783|gb|EFO73182.1| transcriptional regulator, tetR-family [Mycobacterium tuberculosis
SUMu001]
gi|308328538|gb|EFP17389.1| transcriptional regulator, tetR-family [Mycobacterium tuberculosis
SUMu002]
gi|308328952|gb|EFP17803.1| transcriptional regulator, tetR-family [Mycobacterium tuberculosis
SUMu003]
gi|308332774|gb|EFP21625.1| transcriptional regulator, tetR-family [Mycobacterium tuberculosis
SUMu004]
gi|308340266|gb|EFP29117.1| transcriptional regulator, tetR-family [Mycobacterium tuberculosis
SUMu005]
gi|308343604|gb|EFP32455.1| transcriptional regulator, tetR-family [Mycobacterium tuberculosis
SUMu006]
gi|308348071|gb|EFP36922.1| transcriptional regulator, tetR-family [Mycobacterium tuberculosis
SUMu007]
gi|308351995|gb|EFP40846.1| transcriptional regulator, tetR-family [Mycobacterium tuberculosis
SUMu008]
gi|308352781|gb|EFP41632.1| transcriptional regulator, tetR-family [Mycobacterium tuberculosis
SUMu009]
gi|308356631|gb|EFP45482.1| transcriptional regulator, tetR-family [Mycobacterium tuberculosis
SUMu010]
gi|308360587|gb|EFP49438.1| transcriptional regulator, tetR-family [Mycobacterium tuberculosis
SUMu011]
gi|308364233|gb|EFP53084.1| transcriptional regulator, tetR-family [Mycobacterium tuberculosis
SUMu012]
gi|323717751|gb|EGB26949.1| transcriptional regulator [Mycobacterium tuberculosis CDC1551A]
gi|326905397|gb|EGE52330.1| transcriptional regulator, tetR-family [Mycobacterium tuberculosis
W-148]
gi|328460329|gb|AEB05752.1| transcriptional regulator, tetR-family [Mycobacterium tuberculosis
KZN 4207]
gi|339296376|gb|AEJ48487.1| TetR family transcriptional regulator [Mycobacterium tuberculosis
CCDC5079]
gi|339332911|emb|CCC28638.1| putative transcriptional regulatory protein (probably TETR-family)
[Mycobacterium africanum GM041182]
gi|340006711|emb|CCC45899.1| putative transcriptional regulatory protein (probably TETR-family)
[Mycobacterium canettii CIPT 140010059]
gi|341603497|emb|CCC66178.1| probable transcriptional regulatory protein (probably tetR-family)
[Mycobacterium bovis BCG str. Moreau RDJ]
gi|344221389|gb|AEN02020.1| TetR family transcriptional regulator [Mycobacterium tuberculosis
CTRI-2]
Length=200
Score = 409 bits (1051), Expect = 1e-112, Method: Compositional matrix adjust.
Identities = 200/200 (100%), Positives = 200/200 (100%), Gaps = 0/200 (0%)
Query 1 MDRVAGQVNSRRGELLELAAAMFAERGLRATTVRDIADGAGILSGSLYHHFASKEEMVDE 60
MDRVAGQVNSRRGELLELAAAMFAERGLRATTVRDIADGAGILSGSLYHHFASKEEMVDE
Sbjct 1 MDRVAGQVNSRRGELLELAAAMFAERGLRATTVRDIADGAGILSGSLYHHFASKEEMVDE 60
Query 61 LLRGFLDWLFARYRDIVDSTANPLERLQGLFMASFEAIEHHHAQVVIYQDEAQRLASQPR 120
LLRGFLDWLFARYRDIVDSTANPLERLQGLFMASFEAIEHHHAQVVIYQDEAQRLASQPR
Sbjct 61 LLRGFLDWLFARYRDIVDSTANPLERLQGLFMASFEAIEHHHAQVVIYQDEAQRLASQPR 120
Query 121 FSYIEDRNKQQRKMWVDVLNQGIEEGYFRPDLDVDLVYRFIRDTTWVSVRWYRPGGPLTA 180
FSYIEDRNKQQRKMWVDVLNQGIEEGYFRPDLDVDLVYRFIRDTTWVSVRWYRPGGPLTA
Sbjct 121 FSYIEDRNKQQRKMWVDVLNQGIEEGYFRPDLDVDLVYRFIRDTTWVSVRWYRPGGPLTA 180
Query 181 QQVGQQYLAIVLGGITKEGV 200
QQVGQQYLAIVLGGITKEGV
Sbjct 181 QQVGQQYLAIVLGGITKEGV 200
>gi|339299977|gb|AEJ52087.1| TetR family transcriptional regulator [Mycobacterium tuberculosis
CCDC5180]
Length=197
Score = 402 bits (1032), Expect = 2e-110, Method: Compositional matrix adjust.
Identities = 196/197 (99%), Positives = 197/197 (100%), Gaps = 0/197 (0%)
Query 4 VAGQVNSRRGELLELAAAMFAERGLRATTVRDIADGAGILSGSLYHHFASKEEMVDELLR 63
+AGQVNSRRGELLELAAAMFAERGLRATTVRDIADGAGILSGSLYHHFASKEEMVDELLR
Sbjct 1 MAGQVNSRRGELLELAAAMFAERGLRATTVRDIADGAGILSGSLYHHFASKEEMVDELLR 60
Query 64 GFLDWLFARYRDIVDSTANPLERLQGLFMASFEAIEHHHAQVVIYQDEAQRLASQPRFSY 123
GFLDWLFARYRDIVDSTANPLERLQGLFMASFEAIEHHHAQVVIYQDEAQRLASQPRFSY
Sbjct 61 GFLDWLFARYRDIVDSTANPLERLQGLFMASFEAIEHHHAQVVIYQDEAQRLASQPRFSY 120
Query 124 IEDRNKQQRKMWVDVLNQGIEEGYFRPDLDVDLVYRFIRDTTWVSVRWYRPGGPLTAQQV 183
IEDRNKQQRKMWVDVLNQGIEEGYFRPDLDVDLVYRFIRDTTWVSVRWYRPGGPLTAQQV
Sbjct 121 IEDRNKQQRKMWVDVLNQGIEEGYFRPDLDVDLVYRFIRDTTWVSVRWYRPGGPLTAQQV 180
Query 184 GQQYLAIVLGGITKEGV 200
GQQYLAIVLGGITKEGV
Sbjct 181 GQQYLAIVLGGITKEGV 197
>gi|296166592|ref|ZP_06849022.1| TetR family transcriptional regulator [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295898078|gb|EFG77654.1| TetR family transcriptional regulator [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length=200
Score = 374 bits (961), Expect = 3e-102, Method: Compositional matrix adjust.
Identities = 180/200 (90%), Positives = 191/200 (96%), Gaps = 0/200 (0%)
Query 1 MDRVAGQVNSRRGELLELAAAMFAERGLRATTVRDIADGAGILSGSLYHHFASKEEMVDE 60
M+RVAGQ NSRR ELLELAA MFAERGLRATTVRDIAD AGILSGSLYHHF+SKEEMVDE
Sbjct 1 MERVAGQANSRRDELLELAATMFAERGLRATTVRDIADSAGILSGSLYHHFSSKEEMVDE 60
Query 61 LLRGFLDWLFARYRDIVDSTANPLERLQGLFMASFEAIEHHHAQVVIYQDEAQRLASQPR 120
LLR FLDWLFARYR+IVDS ANPLERL+GLFMASFEAIEH HAQVVIYQDEAQRL SQPR
Sbjct 61 LLRSFLDWLFARYREIVDSEANPLERLKGLFMASFEAIEHRHAQVVIYQDEAQRLLSQPR 120
Query 121 FSYIEDRNKQQRKMWVDVLNQGIEEGYFRPDLDVDLVYRFIRDTTWVSVRWYRPGGPLTA 180
FSYIED N+QQRKMWV+V+NQGI+EGYF+PDL+VDLVYRFIRDTTWVSVRWY+PGGPLTA
Sbjct 121 FSYIEDMNRQQRKMWVEVINQGIDEGYFQPDLNVDLVYRFIRDTTWVSVRWYQPGGPLTA 180
Query 181 QQVGQQYLAIVLGGITKEGV 200
QQVGQQYLAIVLGGITKEGV
Sbjct 181 QQVGQQYLAIVLGGITKEGV 200
>gi|254822640|ref|ZP_05227641.1| hypothetical protein MintA_22114 [Mycobacterium intracellulare
ATCC 13950]
Length=200
Score = 371 bits (952), Expect = 4e-101, Method: Compositional matrix adjust.
Identities = 178/200 (89%), Positives = 189/200 (95%), Gaps = 0/200 (0%)
Query 1 MDRVAGQVNSRRGELLELAAAMFAERGLRATTVRDIADGAGILSGSLYHHFASKEEMVDE 60
MDRV GQ NSRR ELLELAA MFAERGLRATTVRDIAD AGILSGSLYHHF+SKEEMVDE
Sbjct 1 MDRVTGQANSRRDELLELAATMFAERGLRATTVRDIADSAGILSGSLYHHFSSKEEMVDE 60
Query 61 LLRGFLDWLFARYRDIVDSTANPLERLQGLFMASFEAIEHHHAQVVIYQDEAQRLASQPR 120
LLR FLDWLFARYR+IVD ANPLERL+GLFMASFEAIEH HAQVVIYQDEAQRL SQPR
Sbjct 61 LLRSFLDWLFARYREIVDGEANPLERLKGLFMASFEAIEHRHAQVVIYQDEAQRLLSQPR 120
Query 121 FSYIEDRNKQQRKMWVDVLNQGIEEGYFRPDLDVDLVYRFIRDTTWVSVRWYRPGGPLTA 180
FSYIED N+QQRKMW+++L+QG++EGYFRPDLDVDLVYRFIRDTTWVSVRWY+PGGPLTA
Sbjct 121 FSYIEDMNRQQRKMWLELLHQGVDEGYFRPDLDVDLVYRFIRDTTWVSVRWYQPGGPLTA 180
Query 181 QQVGQQYLAIVLGGITKEGV 200
QQVGQQYLAIVLGGITKEGV
Sbjct 181 QQVGQQYLAIVLGGITKEGV 200
>gi|240169771|ref|ZP_04748430.1| putative transcriptional regulatory protein [Mycobacterium kansasii
ATCC 12478]
Length=200
Score = 369 bits (948), Expect = 1e-100, Method: Compositional matrix adjust.
Identities = 179/200 (90%), Positives = 189/200 (95%), Gaps = 0/200 (0%)
Query 1 MDRVAGQVNSRRGELLELAAAMFAERGLRATTVRDIADGAGILSGSLYHHFASKEEMVDE 60
MDRVAGQ SRR ELLELAAAMFAERGLRATTVRDIADGAGILSGSLYHHF+SKEEMVDE
Sbjct 1 MDRVAGQAISRRDELLELAAAMFAERGLRATTVRDIADGAGILSGSLYHHFSSKEEMVDE 60
Query 61 LLRGFLDWLFARYRDIVDSTANPLERLQGLFMASFEAIEHHHAQVVIYQDEAQRLASQPR 120
LLRGFLDWLF RYR+IVD+ NPLERL+GLFMASFEAIEH HAQVVIYQDEAQRL+SQPR
Sbjct 61 LLRGFLDWLFNRYREIVDTEPNPLERLKGLFMASFEAIEHRHAQVVIYQDEAQRLSSQPR 120
Query 121 FSYIEDRNKQQRKMWVDVLNQGIEEGYFRPDLDVDLVYRFIRDTTWVSVRWYRPGGPLTA 180
FSY+EDRNKQQRKMWV+VL QGI EGYFRPDLDVDLVYRFIRDTTWVSVRWY+PGGPLTA
Sbjct 121 FSYLEDRNKQQRKMWVEVLKQGIAEGYFRPDLDVDLVYRFIRDTTWVSVRWYQPGGPLTA 180
Query 181 QQVGQQYLAIVLGGITKEGV 200
+QVG YLAIVLGGIT+EGV
Sbjct 181 EQVGLNYLAIVLGGITREGV 200
>gi|183985014|ref|YP_001853305.1| TetR family transcriptional regulator [Mycobacterium marinum
M]
gi|183178340|gb|ACC43450.1| transcriptional regulatory protein (probably TetR-family) [Mycobacterium
marinum M]
Length=200
Score = 368 bits (945), Expect = 2e-100, Method: Compositional matrix adjust.
Identities = 178/200 (89%), Positives = 188/200 (94%), Gaps = 0/200 (0%)
Query 1 MDRVAGQVNSRRGELLELAAAMFAERGLRATTVRDIADGAGILSGSLYHHFASKEEMVDE 60
M+R+ GQ NSRRGELL LAA MFAERGLRATTVRDIADGAGILSGSLYHHFASKEEMVDE
Sbjct 1 MERMTGQANSRRGELLGLAAVMFAERGLRATTVRDIADGAGILSGSLYHHFASKEEMVDE 60
Query 61 LLRGFLDWLFARYRDIVDSTANPLERLQGLFMASFEAIEHHHAQVVIYQDEAQRLASQPR 120
LLR FLDWLFARY +IVD NPLERL+GLF+ASFEAIEH HAQVVIYQDEAQRL+SQPR
Sbjct 61 LLREFLDWLFARYLEIVDGEPNPLERLKGLFLASFEAIEHRHAQVVIYQDEAQRLSSQPR 120
Query 121 FSYIEDRNKQQRKMWVDVLNQGIEEGYFRPDLDVDLVYRFIRDTTWVSVRWYRPGGPLTA 180
FSY+EDRNK+QRKMWVDVLNQGIEEGYFRPDLDVDLVYRFIRDTTWVSVRWY+PGG LTA
Sbjct 121 FSYLEDRNKEQRKMWVDVLNQGIEEGYFRPDLDVDLVYRFIRDTTWVSVRWYKPGGALTA 180
Query 181 QQVGQQYLAIVLGGITKEGV 200
QQVGQ+YLAIVLGGI KEGV
Sbjct 181 QQVGQKYLAIVLGGIQKEGV 200
>gi|41406607|ref|NP_959443.1| hypothetical protein MAP0509 [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|41394956|gb|AAS02826.1| hypothetical protein MAP_0509 [Mycobacterium avium subsp. paratuberculosis
K-10]
Length=202
Score = 363 bits (932), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 172/196 (88%), Positives = 186/196 (95%), Gaps = 0/196 (0%)
Query 1 MDRVAGQVNSRRGELLELAAAMFAERGLRATTVRDIADGAGILSGSLYHHFASKEEMVDE 60
MDRV G NSRR ELLELAAAMFAERGLRATTVRDIAD AGILSGSLYHHF+SKEEMVDE
Sbjct 1 MDRVTGPANSRRDELLELAAAMFAERGLRATTVRDIADSAGILSGSLYHHFSSKEEMVDE 60
Query 61 LLRGFLDWLFARYRDIVDSTANPLERLQGLFMASFEAIEHHHAQVVIYQDEAQRLASQPR 120
+LR FLDWLFARYR+I+DS +NPLERL+GLFMASFEAIEH HAQVVIYQDEA+RL SQPR
Sbjct 61 VLRSFLDWLFARYREIIDSESNPLERLKGLFMASFEAIEHRHAQVVIYQDEAKRLLSQPR 120
Query 121 FSYIEDRNKQQRKMWVDVLNQGIEEGYFRPDLDVDLVYRFIRDTTWVSVRWYRPGGPLTA 180
FSYIED N+QQRKMW++VLNQG++EGYFRPDLDVDLVYRFIRDTTWVSVRWY+PGGPLTA
Sbjct 121 FSYIEDMNRQQRKMWLEVLNQGVDEGYFRPDLDVDLVYRFIRDTTWVSVRWYQPGGPLTA 180
Query 181 QQVGQQYLAIVLGGIT 196
+QVGQQYLAIVLGGIT
Sbjct 181 EQVGQQYLAIVLGGIT 196
>gi|342862386|ref|ZP_08719026.1| hypothetical protein MCOL_25963 [Mycobacterium colombiense CECT
3035]
gi|342130057|gb|EGT83391.1| hypothetical protein MCOL_25963 [Mycobacterium colombiense CECT
3035]
Length=203
Score = 357 bits (915), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 170/196 (87%), Positives = 182/196 (93%), Gaps = 0/196 (0%)
Query 4 VAGQVNSRRGELLELAAAMFAERGLRATTVRDIADGAGILSGSLYHHFASKEEMVDELLR 63
+ GQ NSRR ELLELAA MFAERGLRATTVRDIAD AGILSGSLYHHF+SKEEMVDELLR
Sbjct 1 MPGQANSRRDELLELAATMFAERGLRATTVRDIADSAGILSGSLYHHFSSKEEMVDELLR 60
Query 64 GFLDWLFARYRDIVDSTANPLERLQGLFMASFEAIEHHHAQVVIYQDEAQRLASQPRFSY 123
FLDWLFARYR+IVDS ANPLERL+GLFMASFEAIEH HAQVVIYQDEAQRL SQPRFSY
Sbjct 61 SFLDWLFARYREIVDSEANPLERLKGLFMASFEAIEHRHAQVVIYQDEAQRLLSQPRFSY 120
Query 124 IEDRNKQQRKMWVDVLNQGIEEGYFRPDLDVDLVYRFIRDTTWVSVRWYRPGGPLTAQQV 183
IED N+QQRKMW+++LNQG+ EG FRPDLDVDL+YRFIRDTTWVSVRWY+PGGPLTA+QV
Sbjct 121 IEDMNRQQRKMWLELLNQGVAEGCFRPDLDVDLIYRFIRDTTWVSVRWYQPGGPLTAEQV 180
Query 184 GQQYLAIVLGGITKEG 199
GQQYLAIVLGGIT E
Sbjct 181 GQQYLAIVLGGITAES 196
>gi|118464357|ref|YP_879883.1| TetR family transcriptional regulator [Mycobacterium avium 104]
gi|254773560|ref|ZP_05215076.1| hypothetical protein MaviaA2_02635 [Mycobacterium avium subsp.
avium ATCC 25291]
gi|118165644|gb|ABK66541.1| transcriptional regulator, TetR family protein [Mycobacterium
avium 104]
gi|336458503|gb|EGO37476.1| transcriptional regulator [Mycobacterium avium subsp. paratuberculosis
S397]
Length=199
Score = 355 bits (912), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 168/193 (88%), Positives = 183/193 (95%), Gaps = 0/193 (0%)
Query 4 VAGQVNSRRGELLELAAAMFAERGLRATTVRDIADGAGILSGSLYHHFASKEEMVDELLR 63
+ G NSRR ELLELAAAMFAERGLRATTVRDIAD AGILSGSLYHHF+SKEEMVDE+LR
Sbjct 1 MTGPANSRRDELLELAAAMFAERGLRATTVRDIADSAGILSGSLYHHFSSKEEMVDEVLR 60
Query 64 GFLDWLFARYRDIVDSTANPLERLQGLFMASFEAIEHHHAQVVIYQDEAQRLASQPRFSY 123
FLDWLFARYR+I+DS +NPLERL+GLFMASFEAIEH HAQVVIYQDEA+RL SQPRFSY
Sbjct 61 SFLDWLFARYREIIDSESNPLERLKGLFMASFEAIEHRHAQVVIYQDEAKRLLSQPRFSY 120
Query 124 IEDRNKQQRKMWVDVLNQGIEEGYFRPDLDVDLVYRFIRDTTWVSVRWYRPGGPLTAQQV 183
IED N+QQRKMW++VLNQG++EGYFRPDLDVDLVYRFIRDTTWVSVRWY+PGGPLTA+QV
Sbjct 121 IEDMNRQQRKMWLEVLNQGVDEGYFRPDLDVDLVYRFIRDTTWVSVRWYQPGGPLTAEQV 180
Query 184 GQQYLAIVLGGIT 196
GQQYLAIVLGGIT
Sbjct 181 GQQYLAIVLGGIT 193
>gi|118619302|ref|YP_907634.1| TetR family transcriptional regulator [Mycobacterium ulcerans
Agy99]
gi|118571412|gb|ABL06163.1| transcriptional regulatory protein (probably TetR-family) [Mycobacterium
ulcerans Agy99]
Length=185
Score = 343 bits (879), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 165/183 (91%), Positives = 174/183 (96%), Gaps = 0/183 (0%)
Query 18 LAAAMFAERGLRATTVRDIADGAGILSGSLYHHFASKEEMVDELLRGFLDWLFARYRDIV 77
LAA MFAERGLRATTVRDIADGAGILSGSLYHHFASKEEMVDELLR FLDWLFARY +IV
Sbjct 3 LAAVMFAERGLRATTVRDIADGAGILSGSLYHHFASKEEMVDELLREFLDWLFARYLEIV 62
Query 78 DSTANPLERLQGLFMASFEAIEHHHAQVVIYQDEAQRLASQPRFSYIEDRNKQQRKMWVD 137
D NPLERL+GLF+ASFEAIEH HAQVVIYQDEAQRL+SQPRFSY+EDRNK+QRKMW+D
Sbjct 63 DGEPNPLERLKGLFLASFEAIEHRHAQVVIYQDEAQRLSSQPRFSYLEDRNKEQRKMWLD 122
Query 138 VLNQGIEEGYFRPDLDVDLVYRFIRDTTWVSVRWYRPGGPLTAQQVGQQYLAIVLGGITK 197
VLNQGIEEGYFRPDLDVDLVYRFIRDTTWVSVRWY+PGG LTAQQVGQ+YLAIVLGGI K
Sbjct 123 VLNQGIEEGYFRPDLDVDLVYRFIRDTTWVSVRWYKPGGALTAQQVGQKYLAIVLGGIQK 182
Query 198 EGV 200
EGV
Sbjct 183 EGV 185
>gi|126437640|ref|YP_001073331.1| TetR family transcriptional regulator [Mycobacterium sp. JLS]
gi|126237440|gb|ABO00841.1| transcriptional regulator, TetR family [Mycobacterium sp. JLS]
Length=215
Score = 337 bits (864), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 158/193 (82%), Positives = 177/193 (92%), Gaps = 0/193 (0%)
Query 4 VAGQVNSRRGELLELAAAMFAERGLRATTVRDIADGAGILSGSLYHHFASKEEMVDELLR 63
AGQ +RR ELLELAA MFAERGLRATTVRDIAD AGILSGSLYHHF+SKEEM+DELLR
Sbjct 5 AAGQPPTRRDELLELAATMFAERGLRATTVRDIADSAGILSGSLYHHFSSKEEMIDELLR 64
Query 64 GFLDWLFARYRDIVDSTANPLERLQGLFMASFEAIEHHHAQVVIYQDEAQRLASQPRFSY 123
GFLDWLF RY IV + NPLERL+GLFMASFEAI HAQVVIYQDEA+RL+SQPRFSY
Sbjct 65 GFLDWLFERYHQIVATEPNPLERLKGLFMASFEAIATRHAQVVIYQDEAKRLSSQPRFSY 124
Query 124 IEDRNKQQRKMWVDVLNQGIEEGYFRPDLDVDLVYRFIRDTTWVSVRWYRPGGPLTAQQV 183
+E+RN++QRKMWV+VLNQGI EGYFRPD+DVDL+YRFIRDTTWVSVRWY+PGGPLTA++V
Sbjct 125 VEERNREQRKMWVEVLNQGIAEGYFRPDIDVDLIYRFIRDTTWVSVRWYQPGGPLTAEEV 184
Query 184 GQQYLAIVLGGIT 196
G+QYL+IVLGGIT
Sbjct 185 GRQYLSIVLGGIT 197
>gi|108801654|ref|YP_641851.1| TetR family transcriptional regulator [Mycobacterium sp. MCS]
gi|119870805|ref|YP_940757.1| TetR family transcriptional regulator [Mycobacterium sp. KMS]
gi|108772073|gb|ABG10795.1| transcriptional regulator, TetR family [Mycobacterium sp. MCS]
gi|119696894|gb|ABL93967.1| transcriptional regulator, TetR family [Mycobacterium sp. KMS]
Length=205
Score = 337 bits (863), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 158/192 (83%), Positives = 177/192 (93%), Gaps = 0/192 (0%)
Query 5 AGQVNSRRGELLELAAAMFAERGLRATTVRDIADGAGILSGSLYHHFASKEEMVDELLRG 64
AGQ +RR ELLELAA MFAERGLRATTVRDIAD AGILSGSLYHHF+SKEEM+DELLRG
Sbjct 6 AGQPPTRRDELLELAATMFAERGLRATTVRDIADSAGILSGSLYHHFSSKEEMIDELLRG 65
Query 65 FLDWLFARYRDIVDSTANPLERLQGLFMASFEAIEHHHAQVVIYQDEAQRLASQPRFSYI 124
FLDWLF RY IV + NPLERL+GLFMASFEAI HAQVVIYQDEA+RL+SQPRFSY+
Sbjct 66 FLDWLFERYHQIVATEPNPLERLKGLFMASFEAIATRHAQVVIYQDEAKRLSSQPRFSYV 125
Query 125 EDRNKQQRKMWVDVLNQGIEEGYFRPDLDVDLVYRFIRDTTWVSVRWYRPGGPLTAQQVG 184
E+RN++QRKMWV+VLNQGI EGYFRPD+DVDL+YRFIRDTTWVSVRWY+PGGPLTA++VG
Sbjct 126 EERNREQRKMWVEVLNQGIAEGYFRPDIDVDLIYRFIRDTTWVSVRWYQPGGPLTAEEVG 185
Query 185 QQYLAIVLGGIT 196
+QYL+IVLGGIT
Sbjct 186 RQYLSIVLGGIT 197
>gi|120406231|ref|YP_956060.1| TetR family transcriptional regulator [Mycobacterium vanbaalenii
PYR-1]
gi|119959049|gb|ABM16054.1| transcriptional regulator, TetR family [Mycobacterium vanbaalenii
PYR-1]
Length=208
Score = 337 bits (863), Expect = 9e-91, Method: Compositional matrix adjust.
Identities = 159/194 (82%), Positives = 179/194 (93%), Gaps = 0/194 (0%)
Query 5 AGQVNSRRGELLELAAAMFAERGLRATTVRDIADGAGILSGSLYHHFASKEEMVDELLRG 64
A Q N+RR ELL+LAA MFAERGLRATTVRDIAD AGILSGSLYHHF+SKEEMVDE+LRG
Sbjct 6 APQANTRRDELLQLAATMFAERGLRATTVRDIADSAGILSGSLYHHFSSKEEMVDEVLRG 65
Query 65 FLDWLFARYRDIVDSTANPLERLQGLFMASFEAIEHHHAQVVIYQDEAQRLASQPRFSYI 124
FLDWLF RY+ IV + NPLERL+GLFMASFEAIE HA+VVIYQDEA+RL++Q RF+Y+
Sbjct 66 FLDWLFDRYQQIVATEPNPLERLKGLFMASFEAIETRHAEVVIYQDEAKRLSAQGRFAYV 125
Query 125 EDRNKQQRKMWVDVLNQGIEEGYFRPDLDVDLVYRFIRDTTWVSVRWYRPGGPLTAQQVG 184
E+RNK+QRKMWVDVL QGI+EGYFRPD+DVDLVYRFIRDTTWVSVRWY+PGGPLTAQQVG
Sbjct 126 EERNKEQRKMWVDVLTQGIDEGYFRPDVDVDLVYRFIRDTTWVSVRWYQPGGPLTAQQVG 185
Query 185 QQYLAIVLGGITKE 198
+QYL+IVLGGIT E
Sbjct 186 RQYLSIVLGGITAE 199
>gi|333992354|ref|YP_004524968.1| TetR family transcriptional regulator [Mycobacterium sp. JDM601]
gi|333488322|gb|AEF37714.1| TetR family transcriptional regulator [Mycobacterium sp. JDM601]
Length=195
Score = 318 bits (815), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 148/188 (79%), Positives = 172/188 (92%), Gaps = 0/188 (0%)
Query 10 SRRGELLELAAAMFAERGLRATTVRDIADGAGILSGSLYHHFASKEEMVDELLRGFLDWL 69
+RR ELL LAAAM AERGLRATTVRDIAD AGILSGSLYHHF+SKEEMVDE+LR FLDWL
Sbjct 2 TRRDELLSLAAAMIAERGLRATTVRDIADAAGILSGSLYHHFSSKEEMVDEVLRDFLDWL 61
Query 70 FARYRDIVDSTANPLERLQGLFMASFEAIEHHHAQVVIYQDEAQRLASQPRFSYIEDRNK 129
F RY+ I+D+ ++P+ER +GLF+ASF+AIEH HAQVVIYQDEA+RL+SQ RF Y+++RN+
Sbjct 62 FERYQQIIDTESDPMERFKGLFLASFDAIEHRHAQVVIYQDEAKRLSSQERFGYVDERNR 121
Query 130 QQRKMWVDVLNQGIEEGYFRPDLDVDLVYRFIRDTTWVSVRWYRPGGPLTAQQVGQQYLA 189
QQRKMW+DVL QG E G FRPDLDVDLVYRFIRDTTWVSVRWY+PGGPLTA+QVG+QYLA
Sbjct 122 QQRKMWIDVLQQGAEAGCFRPDLDVDLVYRFIRDTTWVSVRWYQPGGPLTAEQVGRQYLA 181
Query 190 IVLGGITK 197
IVLGGI++
Sbjct 182 IVLGGISE 189
>gi|118473595|ref|YP_890234.1| TetR family transcriptional regulator [Mycobacterium smegmatis
str. MC2 155]
gi|322518315|sp|A0R4Z6.1|KSTR2_MYCS2 RecName: Full=HTH-type transcriptional repressor KstR2
gi|118174882|gb|ABK75778.1| transcriptional regulator, TetR family protein [Mycobacterium
smegmatis str. MC2 155]
Length=205
Score = 316 bits (810), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 146/194 (76%), Positives = 171/194 (89%), Gaps = 0/194 (0%)
Query 4 VAGQVNSRRGELLELAAAMFAERGLRATTVRDIADGAGILSGSLYHHFASKEEMVDELLR 63
Q SRR ELL+LAA MFA+RGL+ATTVRDIAD AGILSGSLYHHF SKE+MV+E+LR
Sbjct 5 TPSQPASRRDELLQLAATMFADRGLKATTVRDIADSAGILSGSLYHHFKSKEQMVEEVLR 64
Query 64 GFLDWLFARYRDIVDSTANPLERLQGLFMASFEAIEHHHAQVVIYQDEAQRLASQPRFSY 123
FLDWLF RY+ I+D+ +PLE+L GLFMASFEAIEH HAQVVIYQDEA+RL+ P+F +
Sbjct 65 DFLDWLFGRYQQILDTATSPLEKLTGLFMASFEAIEHRHAQVVIYQDEAKRLSDLPQFDF 124
Query 124 IEDRNKQQRKMWVDVLNQGIEEGYFRPDLDVDLVYRFIRDTTWVSVRWYRPGGPLTAQQV 183
+E RNK+QRKMWVD+L +G+ +G FRPDLDVDLVYRFIRDTTWVSVRWY+PGGPL+A+QV
Sbjct 125 VETRNKEQRKMWVDILQEGVADGSFRPDLDVDLVYRFIRDTTWVSVRWYKPGGPLSAEQV 184
Query 184 GQQYLAIVLGGITK 197
GQQYLAIVLGGIT+
Sbjct 185 GQQYLAIVLGGITQ 198
>gi|145222075|ref|YP_001132753.1| TetR family transcriptional regulator [Mycobacterium gilvum PYR-GCK]
gi|315446183|ref|YP_004079062.1| TetR family transcriptional regulator [Mycobacterium sp. Spyr1]
gi|145214561|gb|ABP43965.1| transcriptional regulator, TetR family [Mycobacterium gilvum
PYR-GCK]
gi|315264486|gb|ADU01228.1| transcriptional regulator, TetR family [Mycobacterium sp. Spyr1]
Length=197
Score = 314 bits (804), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 150/197 (77%), Positives = 174/197 (89%), Gaps = 3/197 (1%)
Query 1 MDRVAGQVNSRRGELLELAAAMFAERGLRATTVRDIADGAGILSGSLYHHFASKEEMVDE 60
MDR + SRR ELL+LAA MFA+RGLRATTVRDIAD AGILSGSLYHHF SKE+MV+E
Sbjct 1 MDRA---LPSRRDELLQLAATMFADRGLRATTVRDIADSAGILSGSLYHHFKSKEQMVEE 57
Query 61 LLRGFLDWLFARYRDIVDSTANPLERLQGLFMASFEAIEHHHAQVVIYQDEAQRLASQPR 120
+L+ FLDWLF RY +IV +T +PLER+ GLFM SFEAIEH HAQVVIYQDEA+RL S P+
Sbjct 58 VLKDFLDWLFTRYDEIVAATTDPLERVSGLFMVSFEAIEHRHAQVVIYQDEAKRLNSLPQ 117
Query 121 FSYIEDRNKQQRKMWVDVLNQGIEEGYFRPDLDVDLVYRFIRDTTWVSVRWYRPGGPLTA 180
F +++DRN+QQR+MWV+VL QGI EG FRPD+DVDLVYRFIRDTTWVSVRWY+PGGPLTA
Sbjct 118 FGFLDDRNRQQRRMWVEVLKQGIAEGSFRPDIDVDLVYRFIRDTTWVSVRWYQPGGPLTA 177
Query 181 QQVGQQYLAIVLGGITK 197
+QVG+QYLAIVLGGIT+
Sbjct 178 EQVGRQYLAIVLGGITE 194
>gi|169627702|ref|YP_001701351.1| TetR family transcriptional regulator [Mycobacterium abscessus
ATCC 19977]
gi|169239669|emb|CAM60697.1| Probable transcriptional regulator TetR family [Mycobacterium
abscessus]
Length=218
Score = 276 bits (707), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 133/187 (72%), Positives = 156/187 (84%), Gaps = 0/187 (0%)
Query 10 SRRGELLELAAAMFAERGLRATTVRDIADGAGILSGSLYHHFASKEEMVDELLRGFLDWL 69
SRR ELL LAA MFAERGLRATTVRDIAD AGILSGSLYHHF SKE +VDELLR FL+ L
Sbjct 22 SRRDELLSLAAEMFAERGLRATTVRDIADAAGILSGSLYHHFDSKEAIVDELLRDFLEGL 81
Query 70 FARYRDIVDSTANPLERLQGLFMASFEAIEHHHAQVVIYQDEAQRLASQPRFSYIEDRNK 129
FARYR+I + NP++ L+GLF+ASF+AIE HAQV IYQ EA RL SQ RF+Y+ + N
Sbjct 82 FARYREIAAANLNPVDTLKGLFLASFDAIETKHAQVAIYQAEAPRLLSQERFAYLNELNT 141
Query 130 QQRKMWVDVLNQGIEEGYFRPDLDVDLVYRFIRDTTWVSVRWYRPGGPLTAQQVGQQYLA 189
+QR++W++VL GI +GYFRPDLDV +VYRFIRD TWVSVRW+RPGG TAQ+V +QYL+
Sbjct 142 EQRQLWLEVLRDGIAQGYFRPDLDVAVVYRFIRDATWVSVRWFRPGGSRTAQEVAEQYLS 201
Query 190 IVLGGIT 196
IVLGGIT
Sbjct 202 IVLGGIT 208
>gi|325674925|ref|ZP_08154612.1| TetR family transcriptional regulator [Rhodococcus equi ATCC
33707]
gi|325554511|gb|EGD24186.1| TetR family transcriptional regulator [Rhodococcus equi ATCC
33707]
Length=210
Score = 251 bits (642), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 120/189 (64%), Positives = 147/189 (78%), Gaps = 0/189 (0%)
Query 9 NSRRGELLELAAAMFAERGLRATTVRDIADGAGILSGSLYHHFASKEEMVDELLRGFLDW 68
+ RR ELLELAA +FAERGLRATTVRDIAD AGILSGSLYHHF SKE MVDE+LRGF D
Sbjct 17 SGRRAELLELAAGLFAERGLRATTVRDIADAAGILSGSLYHHFDSKESMVDEILRGFQDD 76
Query 69 LFARYRDIVDSTANPLERLQGLFMASFEAIEHHHAQVVIYQDEAQRLASQPRFSYIEDRN 128
LF RYR+IV + E + L +ASFEAI+ H+ V IYQDE + LAS RF+Y+ +RN
Sbjct 77 LFGRYREIVAAGMGSRETFEALVIASFEAIDASHSAVAIYQDEVKHLASNERFAYLAERN 136
Query 129 KQQRKMWVDVLNQGIEEGYFRPDLDVDLVYRFIRDTTWVSVRWYRPGGPLTAQQVGQQYL 188
++ R +WV VL G+ +G FR DLDV++V+RF+RDT WV+VRWYRPGGPLTA+ V +QYL
Sbjct 137 QEFRDLWVGVLEAGVADGSFRQDLDVEIVFRFMRDTVWVAVRWYRPGGPLTAEAVAKQYL 196
Query 189 AIVLGGITK 197
+IVL G+
Sbjct 197 SIVLDGLAS 205
>gi|326384056|ref|ZP_08205739.1| regulatory protein TetR [Gordonia neofelifaecis NRRL B-59395]
gi|326197216|gb|EGD54407.1| regulatory protein TetR [Gordonia neofelifaecis NRRL B-59395]
Length=199
Score = 251 bits (642), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 119/186 (64%), Positives = 148/186 (80%), Gaps = 0/186 (0%)
Query 10 SRRGELLELAAAMFAERGLRATTVRDIADGAGILSGSLYHHFASKEEMVDELLRGFLDWL 69
SRR ELL +A +FA+RGLR+TTVRDIAD AGILSGSLYHHF SKE MVDELLRGFLD L
Sbjct 11 SRRDELLGIAGQLFADRGLRSTTVRDIADAAGILSGSLYHHFDSKESMVDELLRGFLDSL 70
Query 70 FARYRDIVDSTANPLERLQGLFMASFEAIEHHHAQVVIYQDEAQRLASQPRFSYIEDRNK 129
FARYRDI D+ + + ++ L +ASFEAI+ H V IYQ+E+++L +Q RF YI +RN
Sbjct 71 FARYRDITDAGLSATDTIRQLVIASFEAIDSRHTAVAIYQNESRQLIAQERFEYIAERNL 130
Query 130 QQRKMWVDVLNQGIEEGYFRPDLDVDLVYRFIRDTTWVSVRWYRPGGPLTAQQVGQQYLA 189
+ RK+W VL +G++EG FR DLD+DLVYRF+RDT WV+VRWYRPGG +T +Q+ QYL+
Sbjct 131 EFRKLWESVLRRGVQEGDFRADLDIDLVYRFMRDTVWVAVRWYRPGGSMTVEQIADQYLS 190
Query 190 IVLGGI 195
IVL GI
Sbjct 191 IVLDGI 196
>gi|312138171|ref|YP_004005507.1| tetr family transcriptional regulator [Rhodococcus equi 103S]
gi|311887510|emb|CBH46822.1| TetR family transcriptional regulator [Rhodococcus equi 103S]
Length=222
Score = 251 bits (641), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 120/189 (64%), Positives = 147/189 (78%), Gaps = 0/189 (0%)
Query 9 NSRRGELLELAAAMFAERGLRATTVRDIADGAGILSGSLYHHFASKEEMVDELLRGFLDW 68
+ RR ELLELAA +FAERGLRATTVRDIAD AGILSGSLYHHF SKE MVDE+LRGF D
Sbjct 29 SGRRAELLELAAGLFAERGLRATTVRDIADAAGILSGSLYHHFDSKESMVDEILRGFQDD 88
Query 69 LFARYRDIVDSTANPLERLQGLFMASFEAIEHHHAQVVIYQDEAQRLASQPRFSYIEDRN 128
LF RYR+IV + E + L +ASFEAI+ H+ V IYQDE + LAS RF+Y+ +RN
Sbjct 89 LFGRYREIVAAGMGSRETFEALVIASFEAIDASHSAVAIYQDEVKHLASNERFAYLAERN 148
Query 129 KQQRKMWVDVLNQGIEEGYFRPDLDVDLVYRFIRDTTWVSVRWYRPGGPLTAQQVGQQYL 188
++ R +WV VL G+ +G FR DLDV++V+RF+RDT WV+VRWYRPGGPLTA+ V +QYL
Sbjct 149 QEFRDLWVGVLEAGVADGSFRQDLDVEIVFRFMRDTVWVAVRWYRPGGPLTAEAVAKQYL 208
Query 189 AIVLGGITK 197
+IVL G+
Sbjct 209 SIVLDGLAS 217
>gi|54022453|ref|YP_116695.1| putative transcriptional regulator [Nocardia farcinica IFM 10152]
gi|54013961|dbj|BAD55331.1| putative transcriptional regulator [Nocardia farcinica IFM 10152]
Length=212
Score = 244 bits (622), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 115/188 (62%), Positives = 146/188 (78%), Gaps = 0/188 (0%)
Query 9 NSRRGELLELAAAMFAERGLRATTVRDIADGAGILSGSLYHHFASKEEMVDELLRGFLDW 68
++RR ELL LAA +FAERGLRATTVRDIAD AGILSGSLYHHF SKE MVDE+LRGFLD
Sbjct 17 STRRTELLGLAAELFAERGLRATTVRDIADAAGILSGSLYHHFDSKESMVDEILRGFLDD 76
Query 69 LFARYRDIVDSTANPLERLQGLFMASFEAIEHHHAQVVIYQDEAQRLASQPRFSYIEDRN 128
LF RYR+IV + + + L+ L +AS+E+ + HA V IYQ EA+RL RF+YI++ N
Sbjct 77 LFGRYREIVAAGLSSRDTLEALVLASYESFDRSHAAVAIYQAEAKRLRDAERFAYIDEYN 136
Query 129 KQQRKMWVDVLNQGIEEGYFRPDLDVDLVYRFIRDTTWVSVRWYRPGGPLTAQQVGQQYL 188
++ R +W VL G+ +G FRP+LDV+L YRF+RDT WV+VRWYRPGGP+T + + +QYL
Sbjct 137 REFRALWHRVLTNGVADGSFRPELDVELAYRFLRDTVWVAVRWYRPGGPITVENLAKQYL 196
Query 189 AIVLGGIT 196
IVL G+T
Sbjct 197 TIVLDGLT 204
>gi|343928262|ref|ZP_08767716.1| putative TetR family transcriptional regulator [Gordonia alkanivorans
NBRC 16433]
gi|343761856|dbj|GAA14642.1| putative TetR family transcriptional regulator [Gordonia alkanivorans
NBRC 16433]
Length=210
Score = 242 bits (618), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 118/187 (64%), Positives = 145/187 (78%), Gaps = 0/187 (0%)
Query 9 NSRRGELLELAAAMFAERGLRATTVRDIADGAGILSGSLYHHFASKEEMVDELLRGFLDW 68
+SRR ELL A MFAE GLR+TTVRDIAD AGILSGSLYHHF SKE MVDE+LR FLD
Sbjct 21 SSRRDELLATAGRMFAENGLRSTTVRDIADAAGILSGSLYHHFDSKESMVDEILRRFLDD 80
Query 69 LFARYRDIVDSTANPLERLQGLFMASFEAIEHHHAQVVIYQDEAQRLASQPRFSYIEDRN 128
LFARYR+I + + E L+GL +ASFE+I+ V IYQDEA+RL+ Q RF YI + N
Sbjct 81 LFARYREIAGAGLSASETLRGLVVASFESIDAERNAVAIYQDEAKRLSGQERFGYIGELN 140
Query 129 KQQRKMWVDVLNQGIEEGYFRPDLDVDLVYRFIRDTTWVSVRWYRPGGPLTAQQVGQQYL 188
+ R++W VL +G+++G FRPDLDV+LVYRF+RDT WV+VRWYRPGGP+T + + QYL
Sbjct 141 VEFRQLWHAVLQRGVDDGEFRPDLDVELVYRFMRDTVWVAVRWYRPGGPMTVESIADQYL 200
Query 189 AIVLGGI 195
+IVL GI
Sbjct 201 SIVLDGI 207
>gi|226363953|ref|YP_002781735.1| TetR family transcriptional regulator [Rhodococcus opacus B4]
gi|226242442|dbj|BAH52790.1| putative TetR family transcriptional regulator [Rhodococcus opacus
B4]
Length=203
Score = 236 bits (601), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 109/187 (59%), Positives = 141/187 (76%), Gaps = 0/187 (0%)
Query 9 NSRRGELLELAAAMFAERGLRATTVRDIADGAGILSGSLYHHFASKEEMVDELLRGFLDW 68
RR ELL++AA +FAERGLRATTVRDIAD AGILSGSLYHHF SKE MVDE+LRGFLD
Sbjct 14 TGRRAELLDIAATLFAERGLRATTVRDIADAAGILSGSLYHHFDSKESMVDEILRGFLDD 73
Query 69 LFARYRDIVDSTANPLERLQGLFMASFEAIEHHHAQVVIYQDEAQRLASQPRFSYIEDRN 128
LF +YR+IV S + L+ L S+EAI+ H+ V IYQDE + L + RF+Y+ + N
Sbjct 74 LFGKYREIVASGLDARATLEALVTTSYEAIDASHSAVAIYQDEVKHLVANERFAYLSELN 133
Query 129 KQQRKMWVDVLNQGIEEGYFRPDLDVDLVYRFIRDTTWVSVRWYRPGGPLTAQQVGQQYL 188
+ R++W+ VL G+++G FR D+DV+L +RF+RDT WV+VRWYRPGG +T V +QYL
Sbjct 134 TEFRELWMGVLETGVKDGTFRADIDVELAFRFLRDTAWVAVRWYRPGGSVTVDTVAKQYL 193
Query 189 AIVLGGI 195
+IVL G+
Sbjct 194 SIVLDGL 200
>gi|111021570|ref|YP_704542.1| transcriptional regulator [Rhodococcus jostii RHA1]
gi|123045895|sp|Q0S7V2.1|KSTR2_RHOSR RecName: Full=HTH-type transcriptional repressor KstR2
gi|110821100|gb|ABG96384.1| possible transcriptional regulator [Rhodococcus jostii RHA1]
Length=204
Score = 235 bits (600), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 111/194 (58%), Positives = 146/194 (76%), Gaps = 1/194 (0%)
Query 2 DRVAGQVNSRRGELLELAAAMFAERGLRATTVRDIADGAGILSGSLYHHFASKEEMVDEL 61
D +G+ + RR ELL++AA +FAERGLRATTVRDIAD AGILSGSLYHHF SKE MVDE+
Sbjct 7 DDTSGK-SGRRTELLDIAATLFAERGLRATTVRDIADAAGILSGSLYHHFDSKESMVDEI 65
Query 62 LRGFLDWLFARYRDIVDSTANPLERLQGLFMASFEAIEHHHAQVVIYQDEAQRLASQPRF 121
LRGFLD LF +YR+IV S + L+ L S+EAI+ H+ V IYQDE + L + RF
Sbjct 66 LRGFLDDLFGKYREIVASGLDSRATLEALVTTSYEAIDASHSAVAIYQDEVKHLVANERF 125
Query 122 SYIEDRNKQQRKMWVDVLNQGIEEGYFRPDLDVDLVYRFIRDTTWVSVRWYRPGGPLTAQ 181
+Y+ + N + R++W+ VL G+++G FR D+DV+L +RF+RDT WV+VRWYRPGG +T
Sbjct 126 TYLSELNTEFRELWMGVLEAGVKDGSFRSDIDVELAFRFLRDTAWVAVRWYRPGGSVTVD 185
Query 182 QVGQQYLAIVLGGI 195
V +QYL+IVL G+
Sbjct 186 TVAKQYLSIVLDGL 199
>gi|226304382|ref|YP_002764340.1| TetR family transcriptional regulator [Rhodococcus erythropolis
PR4]
gi|229494490|ref|ZP_04388253.1| transcriptional regulator, TetR family [Rhodococcus erythropolis
SK121]
gi|226183497|dbj|BAH31601.1| putative TetR family transcriptional regulator [Rhodococcus erythropolis
PR4]
gi|229318852|gb|EEN84710.1| transcriptional regulator, TetR family [Rhodococcus erythropolis
SK121]
Length=223
Score = 234 bits (598), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 110/188 (59%), Positives = 141/188 (75%), Gaps = 0/188 (0%)
Query 9 NSRRGELLELAAAMFAERGLRATTVRDIADGAGILSGSLYHHFASKEEMVDELLRGFLDW 68
+ RR ELLE+AA +FA+RG+RATTVRDIAD AGILSGSLYHHF SKE MVDE+L FLD
Sbjct 14 SGRRDELLEIAAGLFADRGVRATTVRDIADAAGILSGSLYHHFDSKESMVDEILHQFLDE 73
Query 69 LFARYRDIVDSTANPLERLQGLFMASFEAIEHHHAQVVIYQDEAQRLASQPRFSYIEDRN 128
LF +YR+IV + + L+ L + S+EAI+ H+ V IYQDE + L RF+Y+ +RN
Sbjct 74 LFGKYREIVAAGLDSRATLEALVVTSYEAIDASHSAVAIYQDEVKHLVGNERFAYLAERN 133
Query 129 KQQRKMWVDVLNQGIEEGYFRPDLDVDLVYRFIRDTTWVSVRWYRPGGPLTAQQVGQQYL 188
+ R +WV VL G+ +G FR D+DV+LV+RF+RDT WV+VRWYRPGG L+A V QYL
Sbjct 134 TEFRDLWVGVLEAGVADGTFRSDIDVELVFRFMRDTVWVAVRWYRPGGSLSAHAVAAQYL 193
Query 189 AIVLGGIT 196
AIVL G++
Sbjct 194 AIVLDGLS 201
>gi|118138314|pdb|2IBD|A Chain A, Crystal Structure Of Probable Transcriptional Regulatory
Protein Rha5900
gi|118138315|pdb|2IBD|B Chain B, Crystal Structure Of Probable Transcriptional Regulatory
Protein Rha5900
Length=204
Score = 232 bits (591), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 110/194 (57%), Positives = 144/194 (75%), Gaps = 1/194 (0%)
Query 2 DRVAGQVNSRRGELLELAAAMFAERGLRATTVRDIADGAGILSGSLYHHFASKEEMVDEL 61
D +G+ + RR ELL++AA +FAERGLRATTVRDIAD AGILSGSLYHHF SKE VDE+
Sbjct 7 DDTSGK-SGRRTELLDIAATLFAERGLRATTVRDIADAAGILSGSLYHHFDSKESXVDEI 65
Query 62 LRGFLDWLFARYRDIVDSTANPLERLQGLFMASFEAIEHHHAQVVIYQDEAQRLASQPRF 121
LRGFLD LF +YR+IV S + L+ L S+EAI+ H+ V IYQDE + L + RF
Sbjct 66 LRGFLDDLFGKYREIVASGLDSRATLEALVTTSYEAIDASHSAVAIYQDEVKHLVANERF 125
Query 122 SYIEDRNKQQRKMWVDVLNQGIEEGYFRPDLDVDLVYRFIRDTTWVSVRWYRPGGPLTAQ 181
+Y+ + N + R++W VL G+++G FR D+DV+L +RF+RDT WV+VRWYRPGG +T
Sbjct 126 TYLSELNTEFRELWXGVLEAGVKDGSFRSDIDVELAFRFLRDTAWVAVRWYRPGGSVTVD 185
Query 182 QVGQQYLAIVLGGI 195
V +QYL+IVL G+
Sbjct 186 TVAKQYLSIVLDGL 199
>gi|262203847|ref|YP_003275055.1| TetR family transcriptional regulator [Gordonia bronchialis DSM
43247]
gi|262087194|gb|ACY23162.1| regulatory protein TetR [Gordonia bronchialis DSM 43247]
Length=197
Score = 232 bits (591), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 114/187 (61%), Positives = 140/187 (75%), Gaps = 0/187 (0%)
Query 9 NSRRGELLELAAAMFAERGLRATTVRDIADGAGILSGSLYHHFASKEEMVDELLRGFLDW 68
++RR ELL A MFAE+GLR+TTVRDIAD AGILSGSLYHHF SKE MVDE+LRGFLD
Sbjct 8 STRRDELLATAGQMFAEQGLRSTTVRDIADAAGILSGSLYHHFDSKEAMVDEILRGFLDD 67
Query 69 LFARYRDIVDSTANPLERLQGLFMASFEAIEHHHAQVVIYQDEAQRLASQPRFSYIEDRN 128
LF RYR I + + E L+ L +ASFE+I+ V IYQDEA+RLA Q RF YI+ N
Sbjct 68 LFDRYRAIAAAGLSATETLRQLVIASFESIDAQRNAVAIYQDEAKRLAGQARFGYIDTLN 127
Query 129 KQQRKMWVDVLNQGIEEGYFRPDLDVDLVYRFIRDTTWVSVRWYRPGGPLTAQQVGQQYL 188
+ R++W VL +G+++G FR DLDV LVYRF+RDT WV+VRWYRPGG LT + + QYL
Sbjct 128 VEFRQLWQAVLQRGVDDGEFRADLDVVLVYRFLRDTVWVAVRWYRPGGSLTVEAIADQYL 187
Query 189 AIVLGGI 195
+VL G+
Sbjct 188 TVVLDGL 194
>gi|319947741|ref|ZP_08021947.1| putative TetR family transcriptional regulator [Dietzia cinnamea
P4]
gi|319438591|gb|EFV93505.1| putative TetR family transcriptional regulator [Dietzia cinnamea
P4]
Length=193
Score = 231 bits (589), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 115/187 (62%), Positives = 133/187 (72%), Gaps = 0/187 (0%)
Query 9 NSRRGELLELAAAMFAERGLRATTVRDIADGAGILSGSLYHHFASKEEMVDELLRGFLDW 68
+RR ELL +AA +FAERGLRATTVRDIAD AGILSGSLYHHFASKE +VDE+LRGFLD
Sbjct 4 TTRREELLSIAAGLFAERGLRATTVRDIADAAGILSGSLYHHFASKEAIVDEILRGFLDA 63
Query 69 LFARYRDIVDSTANPLERLQGLFMASFEAIEHHHAQVVIYQDEAQRLASQPRFSYIEDRN 128
LF YR IVDS P L+ L ASFEAI +V IYQDE + L PRF Y+ +RN
Sbjct 64 LFGEYRTIVDSGLEPRATLEALVRASFEAIHRDRDEVAIYQDELKHLRGNPRFDYLRERN 123
Query 129 KQQRKMWVDVLNQGIEEGYFRPDLDVDLVYRFIRDTTWVSVRWYRPGGPLTAQQVGQQYL 188
+ R+MW DVL +G+E G FR DLDV L YRF+RDT WV+VRWYRP + QYL
Sbjct 124 TEFREMWTDVLRRGMESGDFRGDLDVRLTYRFLRDTVWVAVRWYRPDDENDHAAIADQYL 183
Query 189 AIVLGGI 195
IVL G+
Sbjct 184 NIVLDGL 190
>gi|296141504|ref|YP_003648747.1| TetR family transcriptional regulator [Tsukamurella paurometabola
DSM 20162]
gi|296029638|gb|ADG80408.1| transcriptional regulator, TetR family [Tsukamurella paurometabola
DSM 20162]
Length=204
Score = 230 bits (587), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 111/189 (59%), Positives = 140/189 (75%), Gaps = 0/189 (0%)
Query 7 QVNSRRGELLELAAAMFAERGLRATTVRDIADGAGILSGSLYHHFASKEEMVDELLRGFL 66
++RR ELL + A +FAE G RATTVRDIAD AGILSGSLYHHF SKE MVD++LR FL
Sbjct 5 DASTRRAELLAVCARLFAENGYRATTVRDIADAAGILSGSLYHHFDSKESMVDDILRDFL 64
Query 67 DWLFARYRDIVDSTANPLERLQGLFMASFEAIEHHHAQVVIYQDEAQRLASQPRFSYIED 126
D LF RYR ++DS ++P ++L+G +ASF+AI+ V IYQ EA+ LA RF+YI D
Sbjct 65 DRLFTRYRAVLDSGSSPRDQLRGCVIASFDAIDADPEAVAIYQAEARSLAHVERFAYIAD 124
Query 127 RNKQQRKMWVDVLNQGIEEGYFRPDLDVDLVYRFIRDTTWVSVRWYRPGGPLTAQQVGQQ 186
R ++ R MW D+L +G+E G FR DLD+D+ YRF+RDT WV+VRWYRPGG LT+ V Q
Sbjct 125 RLEEFRAMWRDILTRGVESGDFRNDLDIDVTYRFLRDTVWVAVRWYRPGGALTSDAVAAQ 184
Query 187 YLAIVLGGI 195
YL I+ GI
Sbjct 185 YLGILERGI 193
>gi|311744275|ref|ZP_07718079.1| TetR family transcriptional regulator [Aeromicrobium marinum
DSM 15272]
gi|311312448|gb|EFQ82361.1| TetR family transcriptional regulator [Aeromicrobium marinum
DSM 15272]
Length=199
Score = 216 bits (549), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 102/183 (56%), Positives = 133/183 (73%), Gaps = 0/183 (0%)
Query 14 ELLELAAAMFAERGLRATTVRDIADGAGILSGSLYHHFASKEEMVDELLRGFLDWLFARY 73
ELL++AA +FA +G + TTVRDIAD AGILSGSLYHHF SKE MVDE+L F + LF RY
Sbjct 16 ELLQIAAELFATQGFKNTTVRDIADAAGILSGSLYHHFDSKESMVDEILSTFQEELFGRY 75
Query 74 RDIVDSTANPLERLQGLFMASFEAIEHHHAQVVIYQDEAQRLASQPRFSYIEDRNKQQRK 133
+I+ A+P +L+ SFEAI H +V I+Q+EA L + RFSY+ +RN+Q R+
Sbjct 76 AEILAGDADPRAKLEAAVRVSFEAIHQHRNEVAIFQNEADHLGTFERFSYLAERNQQSRE 135
Query 134 MWVDVLNQGIEEGYFRPDLDVDLVYRFIRDTTWVSVRWYRPGGPLTAQQVGQQYLAIVLG 193
+W+ +L +GI G RPDLDV+LV+RFIRDT WV+VRWYRPGG + V QY++I+L
Sbjct 136 VWLTLLGEGIASGALRPDLDVELVHRFIRDTVWVAVRWYRPGGKRSHHDVADQYVSILLD 195
Query 194 GIT 196
GIT
Sbjct 196 GIT 198
>gi|119716989|ref|YP_923954.1| regulatory protein TetR [Nocardioides sp. JS614]
gi|119537650|gb|ABL82267.1| transcriptional regulator, TetR family [Nocardioides sp. JS614]
Length=210
Score = 215 bits (547), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 99/189 (53%), Positives = 139/189 (74%), Gaps = 0/189 (0%)
Query 9 NSRRGELLELAAAMFAERGLRATTVRDIADGAGILSGSLYHHFASKEEMVDELLRGFLDW 68
++RR +LL++AA +FAE+G + TTVRDIAD AGILSGSLYHHF SKE MVDE+LR F +
Sbjct 21 HTRRAQLLQIAAGLFAEKGFKNTTVRDIADAAGILSGSLYHHFDSKESMVDEILRTFQEE 80
Query 69 LFARYRDIVDSTANPLERLQGLFMASFEAIEHHHAQVVIYQDEAQRLASQPRFSYIEDRN 128
LF +Y DI+ +P +L+ + SFEAI+ H +V I+Q+EA L + RF+Y+ DRN
Sbjct 81 LFGQYDDILGGDLDPRAKLEQAVLVSFEAIDKHRDEVAIFQNEAAYLLTFDRFAYLADRN 140
Query 129 KQQRKMWVDVLNQGIEEGYFRPDLDVDLVYRFIRDTTWVSVRWYRPGGPLTAQQVGQQYL 188
+Q +++W+ +L G++ G R DLD++L YRFIRDT WV+V WYRPGG T ++ +QYL
Sbjct 141 RQSQQVWLTLLRTGVDAGVLRDDLDLELTYRFIRDTVWVAVSWYRPGGRRTHTEIARQYL 200
Query 189 AIVLGGITK 197
+I+L GI +
Sbjct 201 SILLEGIAR 209
>gi|333918618|ref|YP_004492199.1| regulatory protein TetR [Amycolicicoccus subflavus DQS3-9A1]
gi|333480839|gb|AEF39399.1| Regulatory protein, TetR [Amycolicicoccus subflavus DQS3-9A1]
Length=198
Score = 209 bits (532), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 102/190 (54%), Positives = 131/190 (69%), Gaps = 0/190 (0%)
Query 9 NSRRGELLELAAAMFAERGLRATTVRDIADGAGILSGSLYHHFASKEEMVDELLRGFLDW 68
RRGELL LA +FAERG ++TTVRDIA+ AGILSGSLYHHF SKE MVDE++R F D
Sbjct 9 TGRRGELLTLACHLFAERGFQSTTVRDIAEAAGILSGSLYHHFDSKESMVDEIIRSFQDE 68
Query 69 LFARYRDIVDSTANPLERLQGLFMASFEAIEHHHAQVVIYQDEAQRLASQPRFSYIEDRN 128
LFA Y I+ P E+L + SFEAI H V IYQ E++ L RFSY+ +RN
Sbjct 69 LFAEYDAIMARDLGPREKLAAVITTSFEAIHDHRDAVAIYQHESKYLQQFERFSYLIERN 128
Query 129 KQQRKMWVDVLNQGIEEGYFRPDLDVDLVYRFIRDTTWVSVRWYRPGGPLTAQQVGQQYL 188
KQ R + +L++G+ G FR DLDV++ YRFIRD+ WV+V WY P G L A ++ ++YL
Sbjct 129 KQFRDILTSLLSEGVTAGAFRADLDVEVTYRFIRDSVWVAVAWYAPEGGLKASEIAERYL 188
Query 189 AIVLGGITKE 198
IVL GI+++
Sbjct 189 GIVLDGISRK 198
>gi|256390569|ref|YP_003112133.1| TetR family transcriptional regulator [Catenulispora acidiphila
DSM 44928]
gi|256356795|gb|ACU70292.1| transcriptional regulator, TetR family [Catenulispora acidiphila
DSM 44928]
Length=197
Score = 201 bits (512), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 93/170 (55%), Positives = 123/170 (73%), Gaps = 0/170 (0%)
Query 26 RGLRATTVRDIADGAGILSGSLYHHFASKEEMVDELLRGFLDWLFARYRDIVDSTANPLE 85
RG + TTVRDIAD AGILSGSLYHHF SKE M DE+LR FLD LF YR IV+ ++P
Sbjct 24 RGYKNTTVRDIADAAGILSGSLYHHFDSKETMADEILRTFLDELFRDYRAIVERQSDPRR 83
Query 86 RLQGLFMASFEAIEHHHAQVVIYQDEAQRLASQPRFSYIEDRNKQQRKMWVDVLNQGIEE 145
+ L ASF+AI+ HA + +YQ+EA++L PRF+Y++D +++ R++W+ L +GI
Sbjct 84 AFEQLVDASFQAIDRSHAAIALYQNEAKQLRQSPRFAYLDDTDREFREIWLGTLEKGIAS 143
Query 146 GYFRPDLDVDLVYRFIRDTTWVSVRWYRPGGPLTAQQVGQQYLAIVLGGI 195
G FR DLD + YRF+RDT WV+VRWY PGG LTA+ V QYL+++L G
Sbjct 144 GAFRADLDATMAYRFVRDTVWVAVRWYTPGGKLTAEAVSAQYLSMILEGF 193
>gi|337769596|emb|CCB78309.1| TetR-family transcriptional regulator [Streptomyces cattleya
NRRL 8057]
Length=228
Score = 197 bits (500), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 97/196 (50%), Positives = 132/196 (68%), Gaps = 3/196 (1%)
Query 3 RVAGQVNS---RRGELLELAAAMFAERGLRATTVRDIADGAGILSGSLYHHFASKEEMVD 59
R G VN+ RRGELL +AA +FA +G ATTVR+IAD AG+L+GSLY+HF SKE M+D
Sbjct 30 RRKGAVNAAPRRRGELLAVAAEVFAAQGYDATTVREIADAAGLLAGSLYYHFDSKESMLD 89
Query 60 ELLRGFLDWLFARYRDIVDSTANPLERLQGLFMASFEAIEHHHAQVVIYQDEAQRLASQP 119
E+L FL L+A Y ++ + P E ++ L SF I+ H A V IYQ E++RL QP
Sbjct 90 EILSTFLGELWAGYDAVLAAGLGPRETIEALVTESFREIDRHRAAVAIYQKESRRLTDQP 149
Query 120 RFSYIEDRNKQQRKMWVDVLNQGIEEGYFRPDLDVDLVYRFIRDTTWVSVRWYRPGGPLT 179
RF Y+ D ++ + W+ L +G+ G FR DLDV L YRF+RDT WV+ WYRPGG +
Sbjct 150 RFGYLADSQRRFEQAWLGTLERGVTAGVFRADLDVRLTYRFVRDTVWVAASWYRPGGQHS 209
Query 180 AQQVGQQYLAIVLGGI 195
+++ +QYL++VL GI
Sbjct 210 PEEIARQYLSMVLDGI 225
>gi|345011419|ref|YP_004813773.1| TetR family transcriptional regulator [Streptomyces violaceusniger
Tu 4113]
gi|344037768|gb|AEM83493.1| transcriptional regulator, TetR family [Streptomyces violaceusniger
Tu 4113]
Length=223
Score = 196 bits (497), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 93/186 (50%), Positives = 128/186 (69%), Gaps = 0/186 (0%)
Query 11 RRGELLELAAAMFAERGLRATTVRDIADGAGILSGSLYHHFASKEEMVDELLRGFLDWLF 70
RR ELL AA +FA +G ATTVR IAD AG+L+GSLY+HF SKE MVDE+L FLD L+
Sbjct 30 RRRELLSTAAEVFAAQGYNATTVRRIADEAGMLAGSLYYHFDSKESMVDEILSTFLDELW 89
Query 71 ARYRDIVDSTANPLERLQGLFMASFEAIEHHHAQVVIYQDEAQRLASQPRFSYIEDRNKQ 130
A Y ++ + P E ++ L SF I+ H A V IYQ E++ L++QPRF Y+ + ++
Sbjct 90 AGYEAVLGAGLGPRETVEALVTESFREIDRHRAAVAIYQKESRHLSAQPRFGYLTESQRR 149
Query 131 QRKMWVDVLNQGIEEGYFRPDLDVDLVYRFIRDTTWVSVRWYRPGGPLTAQQVGQQYLAI 190
+ W+ L +G+ EG FR DLD+ L YRF+RDT WV+ WYRPGG + +++ +QYL++
Sbjct 150 FERAWLGALERGVAEGVFRADLDIRLAYRFLRDTVWVAASWYRPGGQHSPEEIARQYLSM 209
Query 191 VLGGIT 196
VL GIT
Sbjct 210 VLDGIT 215
>gi|291443923|ref|ZP_06583313.1| TetR-family transcriptional regulator [Streptomyces roseosporus
NRRL 15998]
gi|291346870|gb|EFE73774.1| TetR-family transcriptional regulator [Streptomyces roseosporus
NRRL 15998]
Length=203
Score = 193 bits (491), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 92/185 (50%), Positives = 126/185 (69%), Gaps = 0/185 (0%)
Query 11 RRGELLELAAAMFAERGLRATTVRDIADGAGILSGSLYHHFASKEEMVDELLRGFLDWLF 70
RR ELL AA +FA +G ATTVR IAD AG+L+GSLY+HF SKE M+DE+L FLD L+
Sbjct 15 RRRELLATAAEVFAAQGYNATTVRRIADEAGMLAGSLYYHFDSKESMIDEILSTFLDELW 74
Query 71 ARYRDIVDSTANPLERLQGLFMASFEAIEHHHAQVVIYQDEAQRLASQPRFSYIEDRNKQ 130
Y +++ + P E ++ L SF I+ H V IYQ E++ LA+QPRF+Y+ D +
Sbjct 75 QGYDEVLAAGLGPRETIEALVTESFREIDRHRPAVAIYQKESRHLATQPRFAYLADSQTK 134
Query 131 QRKMWVDVLNQGIEEGYFRPDLDVDLVYRFIRDTTWVSVRWYRPGGPLTAQQVGQQYLAI 190
K W+ L +G+ EG FR DLD+ L YRF+RDT WV+ WYRPGG + +++ +QYL++
Sbjct 135 FEKAWLGTLERGVTEGVFRDDLDIRLTYRFVRDTVWVAASWYRPGGHHSPEEIARQYLSM 194
Query 191 VLGGI 195
VL GI
Sbjct 195 VLDGI 199
>gi|297155145|gb|ADI04857.1| TetR family transcriptional regulator [Streptomyces bingchenggensis
BCW-1]
Length=207
Score = 193 bits (490), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 93/186 (50%), Positives = 126/186 (68%), Gaps = 0/186 (0%)
Query 11 RRGELLELAAAMFAERGLRATTVRDIADGAGILSGSLYHHFASKEEMVDELLRGFLDWLF 70
RR ELL AA +FA G ATTVR IAD AG+L+GSLY+HF SKE MVDE+L FLD L+
Sbjct 19 RRRELLSTAAEVFAAHGYNATTVRRIADEAGMLAGSLYYHFDSKEAMVDEILSTFLDELW 78
Query 71 ARYRDIVDSTANPLERLQGLFMASFEAIEHHHAQVVIYQDEAQRLASQPRFSYIEDRNKQ 130
A Y ++ + P E ++ L SF I+ H A V IYQ E++ L++QPRF Y+ ++
Sbjct 79 AGYEAVLAAGLGPRETIEALVTESFREIDRHRAAVAIYQKESRHLSTQPRFGYLTVSQRK 138
Query 131 QRKMWVDVLNQGIEEGYFRPDLDVDLVYRFIRDTTWVSVRWYRPGGPLTAQQVGQQYLAI 190
+ W+ L +G+ EG FR DLD+ L YRF+RDT WV+ WYRPGG + +++ +QYL++
Sbjct 139 FEEAWLGTLERGVTEGVFRADLDIRLAYRFLRDTVWVAASWYRPGGQHSPEEIARQYLSM 198
Query 191 VLGGIT 196
VL GIT
Sbjct 199 VLDGIT 204
>gi|239986975|ref|ZP_04707639.1| TetR family transcriptional regulator [Streptomyces roseosporus
NRRL 11379]
Length=195
Score = 193 bits (490), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 92/185 (50%), Positives = 126/185 (69%), Gaps = 0/185 (0%)
Query 11 RRGELLELAAAMFAERGLRATTVRDIADGAGILSGSLYHHFASKEEMVDELLRGFLDWLF 70
RR ELL AA +FA +G ATTVR IAD AG+L+GSLY+HF SKE M+DE+L FLD L+
Sbjct 7 RRRELLATAAEVFAAQGYNATTVRRIADEAGMLAGSLYYHFDSKESMIDEILSTFLDELW 66
Query 71 ARYRDIVDSTANPLERLQGLFMASFEAIEHHHAQVVIYQDEAQRLASQPRFSYIEDRNKQ 130
Y +++ + P E ++ L SF I+ H V IYQ E++ LA+QPRF+Y+ D +
Sbjct 67 QGYDEVLAAGLGPRETIEALVTESFREIDRHRPAVAIYQKESRHLATQPRFAYLADSQTK 126
Query 131 QRKMWVDVLNQGIEEGYFRPDLDVDLVYRFIRDTTWVSVRWYRPGGPLTAQQVGQQYLAI 190
K W+ L +G+ EG FR DLD+ L YRF+RDT WV+ WYRPGG + +++ +QYL++
Sbjct 127 FEKAWLGTLERGVTEGVFRDDLDIRLTYRFVRDTVWVAASWYRPGGHHSPEEIARQYLSM 186
Query 191 VLGGI 195
VL GI
Sbjct 187 VLDGI 191
>gi|302539964|ref|ZP_07292306.1| TetR family transcriptional regulator [Streptomyces hygroscopicus
ATCC 53653]
gi|302457582|gb|EFL20675.1| TetR family transcriptional regulator [Streptomyces himastatinicus
ATCC 53653]
Length=207
Score = 192 bits (489), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 93/186 (50%), Positives = 128/186 (69%), Gaps = 0/186 (0%)
Query 11 RRGELLELAAAMFAERGLRATTVRDIADGAGILSGSLYHHFASKEEMVDELLRGFLDWLF 70
RR ELL AA +FA +G ATTVR IAD AG+L+GSLY+HF SKE MVDE+L FLD L+
Sbjct 19 RRRELLSTAAEVFAAQGYNATTVRRIADEAGMLAGSLYYHFDSKESMVDEILSTFLDELW 78
Query 71 ARYRDIVDSTANPLERLQGLFMASFEAIEHHHAQVVIYQDEAQRLASQPRFSYIEDRNKQ 130
A Y +++ + P E ++ L SF I+ H A V IYQ E+++LA+ PRF Y+ D ++
Sbjct 79 AGYDEVLRAGLGPRETIEALVTESFREIDRHRAAVAIYQKESRQLAALPRFGYLTDSQRR 138
Query 131 QRKMWVDVLNQGIEEGYFRPDLDVDLVYRFIRDTTWVSVRWYRPGGPLTAQQVGQQYLAI 190
W+ L +G+ +G FR DLD L YRF+RDT WV+ WYRPGG +A+++ +QY+++
Sbjct 139 FEGAWLGTLERGVADGVFRADLDTRLAYRFLRDTVWVAASWYRPGGQHSAEEIARQYVSM 198
Query 191 VLGGIT 196
VL GIT
Sbjct 199 VLDGIT 204
>gi|302549245|ref|ZP_07301587.1| TetR-family transcriptional regulator [Streptomyces viridochromogenes
DSM 40736]
gi|302466863|gb|EFL29956.1| TetR-family transcriptional regulator [Streptomyces viridochromogenes
DSM 40736]
Length=209
Score = 191 bits (486), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 95/196 (49%), Positives = 130/196 (67%), Gaps = 2/196 (1%)
Query 2 DRVAGQVNS--RRGELLELAAAMFAERGLRATTVRDIADGAGILSGSLYHHFASKEEMVD 59
DR V+ RR ELL +AA +FA +G ATTVR IAD AG+L+GSLY+HF SKE M+D
Sbjct 9 DRKKSSVSPPERREELLAIAARVFAAQGYNATTVRKIADAAGMLAGSLYYHFDSKESMLD 68
Query 60 ELLRGFLDWLFARYRDIVDSTANPLERLQGLFMASFEAIEHHHAQVVIYQDEAQRLASQP 119
E+L GFLD L+ARY ++ + P E L+ L SF I+ H V IYQ E++ L +QP
Sbjct 69 EILSGFLDELWARYDAVLCAGLGPRETLEALVTESFREIDRHLDAVAIYQKESRHLGTQP 128
Query 120 RFSYIEDRNKQQRKMWVDVLNQGIEEGYFRPDLDVDLVYRFIRDTTWVSVRWYRPGGPLT 179
F+Y+ + ++ K W+ L +G+ FR DLDV L YRF+RDT WV+ WYRPGG +
Sbjct 129 HFAYLVESQQKFEKAWLGTLERGVSAKVFRADLDVRLTYRFLRDTVWVAASWYRPGGRHS 188
Query 180 AQQVGQQYLAIVLGGI 195
+++ +QYL++VL GI
Sbjct 189 PEEIARQYLSMVLEGI 204
>gi|302533881|ref|ZP_07286223.1| TetR-family transcriptional regulator [Streptomyces sp. C]
gi|302442776|gb|EFL14592.1| TetR-family transcriptional regulator [Streptomyces sp. C]
Length=205
Score = 191 bits (485), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 91/185 (50%), Positives = 125/185 (68%), Gaps = 0/185 (0%)
Query 11 RRGELLELAAAMFAERGLRATTVRDIADGAGILSGSLYHHFASKEEMVDELLRGFLDWLF 70
RR ELL+ AA +FA +G ATTVR IAD AG+L+GSLY+HF SKE M+DE+L FL+ L+
Sbjct 17 RRRELLDTAAEVFAAQGYNATTVRKIADAAGMLAGSLYYHFDSKESMLDEILSAFLNELW 76
Query 71 ARYRDIVDSTANPLERLQGLFMASFEAIEHHHAQVVIYQDEAQRLASQPRFSYIEDRNKQ 130
A Y ++ + P E ++ L SF I+ H A V IYQ EA+ L++QPRF Y+ D +
Sbjct 77 AGYDTVLAAGLGPRETIEALVTESFREIDRHRAAVAIYQKEARTLSAQPRFHYLSDSQVK 136
Query 131 QRKMWVDVLNQGIEEGYFRPDLDVDLVYRFIRDTTWVSVRWYRPGGPLTAQQVGQQYLAI 190
K W+ L +G+ FR DLD+ L YRF+RDT WV+ WYRPGG + +++ +QYL++
Sbjct 137 FEKAWLGTLERGVAAQVFRADLDIRLTYRFVRDTVWVAASWYRPGGQHSPEEIARQYLSM 196
Query 191 VLGGI 195
VL GI
Sbjct 197 VLDGI 201
>gi|326779938|ref|ZP_08239203.1| transcriptional regulator, TetR family [Streptomyces cf. griseus
XylebKG-1]
gi|326660271|gb|EGE45117.1| transcriptional regulator, TetR family [Streptomyces griseus
XylebKG-1]
Length=203
Score = 191 bits (485), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 91/185 (50%), Positives = 124/185 (68%), Gaps = 0/185 (0%)
Query 11 RRGELLELAAAMFAERGLRATTVRDIADGAGILSGSLYHHFASKEEMVDELLRGFLDWLF 70
RR ELL AA +FA G ATTVR IAD AG+L+GSLY+HF SKE M+DE+L FLD L+
Sbjct 15 RRQELLATAAEVFAAHGYNATTVRRIADEAGMLAGSLYYHFDSKESMIDEILSTFLDELW 74
Query 71 ARYRDIVDSTANPLERLQGLFMASFEAIEHHHAQVVIYQDEAQRLASQPRFSYIEDRNKQ 130
Y ++ + P E ++ L SF I+ H V IYQ E++ LA+QPRF+Y+ D +
Sbjct 75 QGYDTVLAARLGPRETIEALVTESFREIDRHRPAVAIYQKESKHLATQPRFAYLADSQTK 134
Query 131 QRKMWVDVLNQGIEEGYFRPDLDVDLVYRFIRDTTWVSVRWYRPGGPLTAQQVGQQYLAI 190
+ W+ L +G+ EG FR DLD+ L YRF+RDT WV+ WYRPGG + +++ +QYL++
Sbjct 135 FEEAWLGTLERGVAEGAFRDDLDIRLTYRFVRDTVWVAASWYRPGGHHSPEEIARQYLSM 194
Query 191 VLGGI 195
VL GI
Sbjct 195 VLDGI 199
>gi|182439286|ref|YP_001827005.1| TetR family transcriptional regulator [Streptomyces griseus subsp.
griseus NBRC 13350]
gi|178467802|dbj|BAG22322.1| putative TetR-family transcriptional regulator [Streptomyces
griseus subsp. griseus NBRC 13350]
Length=195
Score = 191 bits (484), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 91/185 (50%), Positives = 124/185 (68%), Gaps = 0/185 (0%)
Query 11 RRGELLELAAAMFAERGLRATTVRDIADGAGILSGSLYHHFASKEEMVDELLRGFLDWLF 70
RR ELL AA +FA G ATTVR IAD AG+L+GSLY+HF SKE M+DE+L FLD L+
Sbjct 7 RRQELLATAAEVFAAHGYNATTVRRIADEAGMLAGSLYYHFDSKESMIDEILSTFLDELW 66
Query 71 ARYRDIVDSTANPLERLQGLFMASFEAIEHHHAQVVIYQDEAQRLASQPRFSYIEDRNKQ 130
Y ++ + P E ++ L SF I+ H V IYQ E++ LA+QPRF+Y+ D +
Sbjct 67 QGYDTVLAARLGPRETIEALVTESFREIDRHRPAVAIYQKESKHLATQPRFAYLADSQTK 126
Query 131 QRKMWVDVLNQGIEEGYFRPDLDVDLVYRFIRDTTWVSVRWYRPGGPLTAQQVGQQYLAI 190
+ W+ L +G+ EG FR DLD+ L YRF+RDT WV+ WYRPGG + +++ +QYL++
Sbjct 127 FEEAWLGTLERGVAEGAFRDDLDIRLTYRFVRDTVWVAASWYRPGGHHSPEEIARQYLSM 186
Query 191 VLGGI 195
VL GI
Sbjct 187 VLDGI 191
>gi|297198997|ref|ZP_06916394.1| TetR family transcriptional regulator [Streptomyces sviceus ATCC
29083]
gi|197711081|gb|EDY55115.1| TetR family transcriptional regulator [Streptomyces sviceus ATCC
29083]
Length=204
Score = 190 bits (483), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 91/193 (48%), Positives = 131/193 (68%), Gaps = 0/193 (0%)
Query 3 RVAGQVNSRRGELLELAAAMFAERGLRATTVRDIADGAGILSGSLYHHFASKEEMVDELL 62
+V+ +RR ELL+ AA +FAE+G ATTVR IAD AG+L+GSLY+HF SKE M++E+L
Sbjct 8 QVSAAAPARRRELLDTAAEVFAEQGYNATTVRKIADHAGMLAGSLYYHFDSKESMLEEIL 67
Query 63 RGFLDWLFARYRDIVDSTANPLERLQGLFMASFEAIEHHHAQVVIYQDEAQRLASQPRFS 122
R FLD L+ Y ++ + P E L+ L SF I+ H A V IYQ E+++L +Q RF+
Sbjct 68 RTFLDELWDGYDTVLGAELGPRETLEALVTESFREIDRHRAAVAIYQKESKQLVAQERFA 127
Query 123 YIEDRNKQQRKMWVDVLNQGIEEGYFRPDLDVDLVYRFIRDTTWVSVRWYRPGGPLTAQQ 182
++ + ++ K W+ L +G+ FR DLDV L YRF+RDT WV+ WYRPGG + ++
Sbjct 128 FLAESQRRFEKAWLSTLERGVAAEVFRADLDVRLTYRFVRDTVWVAASWYRPGGQHSPEE 187
Query 183 VGQQYLAIVLGGI 195
+ +QYL++VL GI
Sbjct 188 IARQYLSMVLDGI 200
>gi|297194955|ref|ZP_06912353.1| TetR-family transcriptional regulator [Streptomyces pristinaespiralis
ATCC 25486]
gi|297152557|gb|EFH31843.1| TetR-family transcriptional regulator [Streptomyces pristinaespiralis
ATCC 25486]
Length=204
Score = 190 bits (482), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 94/193 (49%), Positives = 126/193 (66%), Gaps = 0/193 (0%)
Query 3 RVAGQVNSRRGELLELAAAMFAERGLRATTVRDIADGAGILSGSLYHHFASKEEMVDELL 62
+V+ RR ELL AA +FA +G ATTVR IAD AG+L+GSLY+HF SKE M+DE+L
Sbjct 8 QVSAAPPERRRELLATAAEVFAAQGYNATTVRKIADAAGMLAGSLYYHFDSKESMLDEIL 67
Query 63 RGFLDWLFARYRDIVDSTANPLERLQGLFMASFEAIEHHHAQVVIYQDEAQRLASQPRFS 122
FLD L+A Y ++ + P E ++ L SF I+ H V IYQ E++ LA QPRF
Sbjct 68 STFLDELWAGYDTVLAAGLGPRETIEALVTESFREIDRHRDAVAIYQKESRHLAVQPRFR 127
Query 123 YIEDRNKQQRKMWVDVLNQGIEEGYFRPDLDVDLVYRFIRDTTWVSVRWYRPGGPLTAQQ 182
Y+ D + K W+ L +G+ E FR DLDV L YRF+RDT WV+ WYRPGG + ++
Sbjct 128 YLADSQVKFEKAWLGTLERGVAEQAFRADLDVRLTYRFVRDTVWVAASWYRPGGLHSPEE 187
Query 183 VGQQYLAIVLGGI 195
+ +QYL++VL GI
Sbjct 188 IARQYLSMVLDGI 200
>gi|326328935|ref|ZP_08195266.1| transcriptional regulator, TetR family [Nocardioidaceae bacterium
Broad-1]
gi|325953278|gb|EGD45287.1| transcriptional regulator, TetR family [Nocardioidaceae bacterium
Broad-1]
Length=205
Score = 188 bits (478), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 93/187 (50%), Positives = 120/187 (65%), Gaps = 0/187 (0%)
Query 9 NSRRGELLELAAAMFAERGLRATTVRDIADGAGILSGSLYHHFASKEEMVDELLRGFLDW 68
+SRR ELL LAA MFA +G TTVRDIAD AGILSGSLYHHF SKE M+ E+L GFLD
Sbjct 17 SSRRAELLTLAAEMFATKGFSQTTVRDIADAAGILSGSLYHHFRSKEAMLTEVLSGFLDG 76
Query 69 LFARYRDIVDSTANPLERLQGLFMASFEAIEHHHAQVVIYQDEAQRLASQPRFSYIEDRN 128
L AR+ +IV+S +P L GL SF I + V +YQ+EA LA+ F ++ +R+
Sbjct 77 LNARFTEIVESGVDPQADLDGLIAESFRTIHNERLAVALYQNEASFLATVEGFEFVAERS 136
Query 129 KQQRKMWVDVLNQGIEEGYFRPDLDVDLVYRFIRDTTWVSVRWYRPGGPLTAQQVGQQYL 188
+ +W+ V+ G G F+ LD L YRFIRD W +V WYRPGG T + + +QYL
Sbjct 137 RDNEALWIRVIEAGQASGVFQASLDPALTYRFIRDGVWSTVSWYRPGGRHTPETLSEQYL 196
Query 189 AIVLGGI 195
++ GI
Sbjct 197 KLLHAGI 203
>gi|29832740|ref|NP_827374.1| TetR family transcriptional regulator [Streptomyces avermitilis
MA-4680]
gi|29609860|dbj|BAC73909.1| putative TetR-family transcriptional regulator [Streptomyces
avermitilis MA-4680]
Length=204
Score = 188 bits (477), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 90/185 (49%), Positives = 127/185 (69%), Gaps = 0/185 (0%)
Query 11 RRGELLELAAAMFAERGLRATTVRDIADGAGILSGSLYHHFASKEEMVDELLRGFLDWLF 70
RR ELL+ AA +FAE+G ATTVR IAD AG+L+GSLY+HF SKE M++E+LR FLD L+
Sbjct 7 RRRELLDTAAEVFAEQGYNATTVRKIADHAGMLAGSLYYHFDSKESMLEEILRTFLDELW 66
Query 71 ARYRDIVDSTANPLERLQGLFMASFEAIEHHHAQVVIYQDEAQRLASQPRFSYIEDRNKQ 130
Y ++D+ P E L+ L SF I+ H A V IYQ E+++L +Q RF+++ + ++
Sbjct 67 DGYDTVLDAELGPRETLEALVTESFREIDRHRAAVAIYQKESRQLVAQERFAFLAESQRR 126
Query 131 QRKMWVDVLNQGIEEGYFRPDLDVDLVYRFIRDTTWVSVRWYRPGGPLTAQQVGQQYLAI 190
K W+ L +G+ FR DLD+ L YRF+RDT WV+ WYRPGG +++ +QYL++
Sbjct 127 FEKAWLATLERGVAAEVFRADLDIRLTYRFVRDTVWVAASWYRPGGQHRPEEIARQYLSM 186
Query 191 VLGGI 195
VL GI
Sbjct 187 VLDGI 191
>gi|254387118|ref|ZP_05002391.1| TetR-family transcriptional regulator [Streptomyces sp. Mg1]
gi|194345936|gb|EDX26902.1| TetR-family transcriptional regulator [Streptomyces sp. Mg1]
Length=204
Score = 188 bits (477), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 90/189 (48%), Positives = 124/189 (66%), Gaps = 0/189 (0%)
Query 11 RRGELLELAAAMFAERGLRATTVRDIADGAGILSGSLYHHFASKEEMVDELLRGFLDWLF 70
RR ELL AA +FA +G ATTVR IAD AG+L+GSLY+HF SKE M+DE+L FL L+
Sbjct 16 RRRELLGTAAEVFAAQGYNATTVRKIADAAGMLAGSLYYHFDSKESMLDEILSAFLTELW 75
Query 71 ARYRDIVDSTANPLERLQGLFMASFEAIEHHHAQVVIYQDEAQRLASQPRFSYIEDRNKQ 130
Y ++ + P E ++ L SF I+ H A V IYQ E++ L++QPRF Y+ D ++
Sbjct 76 EGYDTVLAAGLGPRETIEALVTESFREIDRHRAAVAIYQKESRHLSAQPRFRYLSDSQQK 135
Query 131 QRKMWVDVLNQGIEEGYFRPDLDVDLVYRFIRDTTWVSVRWYRPGGPLTAQQVGQQYLAI 190
K W+ L +G+ FR DLD+ L YRF+RDT WV+ WYRPGG + +++ +QYL++
Sbjct 136 FEKAWLGTLERGVAARVFRADLDIRLTYRFVRDTVWVAASWYRPGGQHSPEEIARQYLSM 195
Query 191 VLGGITKEG 199
VL GI G
Sbjct 196 VLDGIAVRG 204
>gi|312195765|ref|YP_004015826.1| TetR family transcriptional regulator [Frankia sp. EuI1c]
gi|311227101|gb|ADP79956.1| regulatory protein TetR [Frankia sp. EuI1c]
Length=253
Score = 186 bits (473), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 89/187 (48%), Positives = 119/187 (64%), Gaps = 0/187 (0%)
Query 9 NSRRGELLELAAAMFAERGLRATTVRDIADGAGILSGSLYHHFASKEEMVDELLRGFLDW 68
+ RR ++E+AA +FA+RG RATTVR+IAD AG+LSGSLYHHF SKE ++DELL FL
Sbjct 62 SERRAAIVEIAAGLFAQRGYRATTVREIADAAGLLSGSLYHHFDSKESIIDELLSSFLTE 121
Query 69 LFARYRDIVDSTANPLERLQGLFMASFEAIEHHHAQVVIYQDEAQRLASQPRFSYIEDRN 128
L A Y I A P + + L ++F AI H A V ++Q+E LA+ PRF Y+
Sbjct 122 LQAEYAAIAAVPARPTDTIAALVRSAFAAIARHRAAVTVFQNERGYLATLPRFGYLRTSE 181
Query 129 KQQRKMWVDVLNQGIEEGYFRPDLDVDLVYRFIRDTTWVSVRWYRPGGPLTAQQVGQQYL 188
+ +++W+D L GI G R DLD L +RF+RD WVSV WYRP G L ++ + +L
Sbjct 182 EASQRLWLDALRAGIAAGELRADLDPKLTHRFLRDAIWVSVHWYRPDGRLAPDELAEHFL 241
Query 189 AIVLGGI 195
A V GI
Sbjct 242 ATVFDGI 248
>gi|328881713|emb|CCA54952.1| Transcriptional factor in putative operon for degradation of
branched-chain alkanes, nitroalkanes and may be also cyclic
ketones, alkenoic acids [Streptomyces venezuelae ATCC 10712]
Length=206
Score = 186 bits (472), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 93/197 (48%), Positives = 127/197 (65%), Gaps = 3/197 (1%)
Query 2 DRVAGQVNS---RRGELLELAAAMFAERGLRATTVRDIADGAGILSGSLYHHFASKEEMV 58
D+ QV+ RR ELL+ AA +FA +G ATTVR IAD AG+L+GSLY+HF SKE M+
Sbjct 6 DKKKTQVSGGPERRRELLDTAAEVFAAQGYNATTVRKIADAAGMLAGSLYYHFDSKESML 65
Query 59 DELLRGFLDWLFARYRDIVDSTANPLERLQGLFMASFEAIEHHHAQVVIYQDEAQRLASQ 118
DE+L FL L+ Y ++ + P E ++ L SF I+ H A V IYQ E++ L
Sbjct 66 DEILSTFLGELWEGYDAVLAAGRGPRETIEALVTESFREIDRHRAAVAIYQKESRHLTDL 125
Query 119 PRFSYIEDRNKQQRKMWVDVLNQGIEEGYFRPDLDVDLVYRFIRDTTWVSVRWYRPGGPL 178
PRF Y+ D ++ K W+ L +G+ G FR DLDV L YRF+RDT WV+ WYRPGG
Sbjct 126 PRFHYLADSQRKFEKAWLGTLERGVAAGVFRADLDVRLTYRFVRDTVWVAASWYRPGGLH 185
Query 179 TAQQVGQQYLAIVLGGI 195
+ +++ +QYL++VL GI
Sbjct 186 SPEEIARQYLSMVLDGI 202
Lambda K H
0.323 0.138 0.414
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 218250040016
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40