BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv3558 Length=552 Score E Sequences producing significant alignments: (Bits) Value gi|298527036|ref|ZP_07014445.1| predicted protein [Mycobacterium... 1013 0.0 gi|31794734|ref|NP_857227.1| PPE family protein [Mycobacterium b... 1012 0.0 gi|289571800|ref|ZP_06452027.1| PPE family protein [Mycobacteriu... 1011 0.0 gi|289445150|ref|ZP_06434894.1| PPE family protein [Mycobacteriu... 1011 0.0 gi|340628522|ref|YP_004746974.1| PPE family protein [Mycobacteri... 1009 0.0 gi|15843170|ref|NP_338207.1| PPE family protein [Mycobacterium t... 1008 0.0 gi|253800599|ref|YP_003033600.1| PPE family protein [Mycobacteri... 818 0.0 gi|297636230|ref|ZP_06954010.1| PPE family protein [Mycobacteriu... 814 0.0 gi|148824764|ref|YP_001289518.1| PPE family protein [Mycobacteri... 814 0.0 gi|289763736|ref|ZP_06523114.1| PPE family protein [Mycobacteriu... 812 0.0 gi|289747395|ref|ZP_06506773.1| predicted protein [Mycobacterium... 778 0.0 gi|289572210|ref|ZP_06452437.1| predicted protein [Mycobacterium... 742 0.0 gi|339633556|ref|YP_004725198.1| PPE family protein [Mycobacteri... 738 0.0 gi|289440987|ref|ZP_06430731.1| PPE family protein [Mycobacteriu... 527 2e-147 gi|183985015|ref|YP_001853306.1| PPE family protein [Mycobacteri... 497 2e-138 gi|240169772|ref|ZP_04748431.1| PPE family protein [Mycobacteriu... 496 6e-138 gi|240172883|ref|ZP_04751542.1| PPE family protein [Mycobacteriu... 440 3e-121 gi|240168775|ref|ZP_04747434.1| PPE family protein [Mycobacteriu... 440 3e-121 gi|307086350|ref|ZP_07495463.1| hypothetical protein TMLG_00048 ... 431 2e-118 gi|308406192|ref|ZP_07495462.2| putative PPE family protein [Myc... 400 2e-109 gi|183981484|ref|YP_001849775.1| PPE family protein [Mycobacteri... 395 1e-107 gi|183981425|ref|YP_001849716.1| PPE family protein [Mycobacteri... 392 6e-107 gi|183981151|ref|YP_001849442.1| PPE family protein [Mycobacteri... 387 3e-105 gi|340628497|ref|YP_004746949.1| PPE family protein [Mycobacteri... 384 3e-104 gi|15843145|ref|NP_338182.1| PPE family protein [Mycobacterium t... 382 6e-104 gi|340625774|ref|YP_004744226.1| PPE family protein [Mycobacteri... 382 1e-103 gi|289440962|ref|ZP_06430706.1| PPE family protein [Mycobacteriu... 381 2e-103 gi|240170430|ref|ZP_04749089.1| PPE family protein [Mycobacteriu... 381 2e-103 gi|240173028|ref|ZP_04751686.1| PPE family protein [Mycobacteriu... 378 1e-102 gi|240171043|ref|ZP_04749702.1| PPE family protein [Mycobacteriu... 369 8e-100 gi|306778415|ref|ZP_07416752.1| PPE family protein [Mycobacteriu... 366 6e-99 gi|289763711|ref|ZP_06523089.1| PPE family protein [Mycobacteriu... 366 6e-99 gi|183981566|ref|YP_001849857.1| PPE family protein [Mycobacteri... 366 7e-99 gi|183984524|ref|YP_001852815.1| PPE family protein [Mycobacteri... 365 8e-99 gi|183981319|ref|YP_001849610.1| PPE family protein [Mycobacteri... 363 4e-98 gi|240169655|ref|ZP_04748314.1| PPE family protein [Mycobacteriu... 362 1e-97 gi|306791127|ref|ZP_07429429.1| putative PPE family protein [Myc... 359 6e-97 gi|118616670|ref|YP_905002.1| PPE family protein [Mycobacterium ... 358 2e-96 gi|323719996|gb|EGB29108.1| PPE family protein [Mycobacterium tu... 354 3e-95 gi|308373181|ref|ZP_07431301.2| PPE family protein [Mycobacteriu... 352 7e-95 gi|308378968|ref|ZP_07484506.2| PPE family protein [Mycobacteriu... 352 1e-94 gi|121637470|ref|YP_977693.1| PPE family protein [Mycobacterium ... 352 1e-94 gi|15841015|ref|NP_336052.1| PPE family protein [Mycobacterium t... 352 1e-94 gi|254550567|ref|ZP_05141014.1| PPE family protein [Mycobacteriu... 351 1e-94 gi|297634116|ref|ZP_06951896.1| PPE family protein [Mycobacteriu... 351 2e-94 gi|306779561|ref|ZP_07417898.1| PPE family protein [Mycobacteriu... 350 4e-94 gi|340626569|ref|YP_004745021.1| PPE family protein [Mycobacteri... 350 5e-94 gi|57116882|ref|YP_177817.1| PPE family protein [Mycobacterium t... 350 5e-94 gi|306775737|ref|ZP_07414074.1| PPE family protein [Mycobacteriu... 350 6e-94 gi|254364419|ref|ZP_04980465.1| PPE family protein [Mycobacteriu... 347 3e-93 >gi|298527036|ref|ZP_07014445.1| predicted protein [Mycobacterium tuberculosis 94_M4241A] gi|298496830|gb|EFI32124.1| predicted protein [Mycobacterium tuberculosis 94_M4241A] Length=632 Score = 1013 bits (2619), Expect = 0.0, Method: Compositional matrix adjust. Identities = 552/552 (100%), Positives = 552/552 (100%), Gaps = 0/552 (0%) Query 1 MAHFSVLPPEINSLRMYLGAGSAPMLQAAAAWDGLAAELGTAASSFSSVTTGLTGQAWQG 60 MAHFSVLPPEINSLRMYLGAGSAPMLQAAAAWDGLAAELGTAASSFSSVTTGLTGQAWQG Sbjct 81 MAHFSVLPPEINSLRMYLGAGSAPMLQAAAAWDGLAAELGTAASSFSSVTTGLTGQAWQG 140 Query 61 PASAAMAAAAAPYAGFLTTASAQAQLAAGQAKAVASVFEAAKAAIVPPAAVAANREAFLA 120 PASAAMAAAAAPYAGFLTTASAQAQLAAGQAKAVASVFEAAKAAIVPPAAVAANREAFLA Sbjct 141 PASAAMAAAAAPYAGFLTTASAQAQLAAGQAKAVASVFEAAKAAIVPPAAVAANREAFLA 200 Query 121 LIRSNWLGLNAPWIAAVESLYEEYWAADVAAMTGYHAGASQAAAQLPLPAGLQQFLNTLP 180 LIRSNWLGLNAPWIAAVESLYEEYWAADVAAMTGYHAGASQAAAQLPLPAGLQQFLNTLP Sbjct 201 LIRSNWLGLNAPWIAAVESLYEEYWAADVAAMTGYHAGASQAAAQLPLPAGLQQFLNTLP 260 Query 181 NLGIGNQGNANLGGGNTGSGNIGNGNKGSSNLGGGNIGNNNIGSGNRGSDNFGAGNVGTG 240 NLGIGNQGNANLGGGNTGSGNIGNGNKGSSNLGGGNIGNNNIGSGNRGSDNFGAGNVGTG Sbjct 261 NLGIGNQGNANLGGGNTGSGNIGNGNKGSSNLGGGNIGNNNIGSGNRGSDNFGAGNVGTG 320 Query 241 NIGFGNQGPIDVNLLATPGQNNVGLGNIGNNNMGFGNTGDANTGGGNTGNGNIGGGNTGN 300 NIGFGNQGPIDVNLLATPGQNNVGLGNIGNNNMGFGNTGDANTGGGNTGNGNIGGGNTGN Sbjct 321 NIGFGNQGPIDVNLLATPGQNNVGLGNIGNNNMGFGNTGDANTGGGNTGNGNIGGGNTGN 380 Query 301 NNFGFGNTGNNNIGIGLTGNNQMGINLAGLLNSGSGNIGIGNSGTNNIGLFNSGSGNIGV 360 NNFGFGNTGNNNIGIGLTGNNQMGINLAGLLNSGSGNIGIGNSGTNNIGLFNSGSGNIGV Sbjct 381 NNFGFGNTGNNNIGIGLTGNNQMGINLAGLLNSGSGNIGIGNSGTNNIGLFNSGSGNIGV 440 Query 361 FNTGANTLVPGDLNNLGVGNSGNANIGFGNAGVLNTGFGNASILNTGLGNAGELNTGFGN 420 FNTGANTLVPGDLNNLGVGNSGNANIGFGNAGVLNTGFGNASILNTGLGNAGELNTGFGN Sbjct 441 FNTGANTLVPGDLNNLGVGNSGNANIGFGNAGVLNTGFGNASILNTGLGNAGELNTGFGN 500 Query 421 AGFVNTGFDNSGNVNTGNGNSGNINTGSWNAGNVNTGFGIITDSGLTNSGFGNTGTDVSG 480 AGFVNTGFDNSGNVNTGNGNSGNINTGSWNAGNVNTGFGIITDSGLTNSGFGNTGTDVSG Sbjct 501 AGFVNTGFDNSGNVNTGNGNSGNINTGSWNAGNVNTGFGIITDSGLTNSGFGNTGTDVSG 560 Query 481 FFNTPTGPLAVDVSGFFNTASGGTVINGQTSGIGNIGVPGTLFGSVRSGLNTGLFNMGTA 540 FFNTPTGPLAVDVSGFFNTASGGTVINGQTSGIGNIGVPGTLFGSVRSGLNTGLFNMGTA Sbjct 561 FFNTPTGPLAVDVSGFFNTASGGTVINGQTSGIGNIGVPGTLFGSVRSGLNTGLFNMGTA 620 Query 541 ISGLFNLRQLLG 552 ISGLFNLRQLLG Sbjct 621 ISGLFNLRQLLG 632 >gi|31794734|ref|NP_857227.1| PPE family protein [Mycobacterium bovis AF2122/97] gi|57117124|ref|YP_177988.1| PPE family protein [Mycobacterium tuberculosis H37Rv] gi|121639477|ref|YP_979701.1| PPE family protein [Mycobacterium bovis BCG str. Pasteur 1173P2] 43 more sequence titles Length=552 Score = 1012 bits (2616), Expect = 0.0, Method: Compositional matrix adjust. Identities = 552/552 (100%), Positives = 552/552 (100%), Gaps = 0/552 (0%) Query 1 MAHFSVLPPEINSLRMYLGAGSAPMLQAAAAWDGLAAELGTAASSFSSVTTGLTGQAWQG 60 MAHFSVLPPEINSLRMYLGAGSAPMLQAAAAWDGLAAELGTAASSFSSVTTGLTGQAWQG Sbjct 1 MAHFSVLPPEINSLRMYLGAGSAPMLQAAAAWDGLAAELGTAASSFSSVTTGLTGQAWQG 60 Query 61 PASAAMAAAAAPYAGFLTTASAQAQLAAGQAKAVASVFEAAKAAIVPPAAVAANREAFLA 120 PASAAMAAAAAPYAGFLTTASAQAQLAAGQAKAVASVFEAAKAAIVPPAAVAANREAFLA Sbjct 61 PASAAMAAAAAPYAGFLTTASAQAQLAAGQAKAVASVFEAAKAAIVPPAAVAANREAFLA 120 Query 121 LIRSNWLGLNAPWIAAVESLYEEYWAADVAAMTGYHAGASQAAAQLPLPAGLQQFLNTLP 180 LIRSNWLGLNAPWIAAVESLYEEYWAADVAAMTGYHAGASQAAAQLPLPAGLQQFLNTLP Sbjct 121 LIRSNWLGLNAPWIAAVESLYEEYWAADVAAMTGYHAGASQAAAQLPLPAGLQQFLNTLP 180 Query 181 NLGIGNQGNANLGGGNTGSGNIGNGNKGSSNLGGGNIGNNNIGSGNRGSDNFGAGNVGTG 240 NLGIGNQGNANLGGGNTGSGNIGNGNKGSSNLGGGNIGNNNIGSGNRGSDNFGAGNVGTG Sbjct 181 NLGIGNQGNANLGGGNTGSGNIGNGNKGSSNLGGGNIGNNNIGSGNRGSDNFGAGNVGTG 240 Query 241 NIGFGNQGPIDVNLLATPGQNNVGLGNIGNNNMGFGNTGDANTGGGNTGNGNIGGGNTGN 300 NIGFGNQGPIDVNLLATPGQNNVGLGNIGNNNMGFGNTGDANTGGGNTGNGNIGGGNTGN Sbjct 241 NIGFGNQGPIDVNLLATPGQNNVGLGNIGNNNMGFGNTGDANTGGGNTGNGNIGGGNTGN 300 Query 301 NNFGFGNTGNNNIGIGLTGNNQMGINLAGLLNSGSGNIGIGNSGTNNIGLFNSGSGNIGV 360 NNFGFGNTGNNNIGIGLTGNNQMGINLAGLLNSGSGNIGIGNSGTNNIGLFNSGSGNIGV Sbjct 301 NNFGFGNTGNNNIGIGLTGNNQMGINLAGLLNSGSGNIGIGNSGTNNIGLFNSGSGNIGV 360 Query 361 FNTGANTLVPGDLNNLGVGNSGNANIGFGNAGVLNTGFGNASILNTGLGNAGELNTGFGN 420 FNTGANTLVPGDLNNLGVGNSGNANIGFGNAGVLNTGFGNASILNTGLGNAGELNTGFGN Sbjct 361 FNTGANTLVPGDLNNLGVGNSGNANIGFGNAGVLNTGFGNASILNTGLGNAGELNTGFGN 420 Query 421 AGFVNTGFDNSGNVNTGNGNSGNINTGSWNAGNVNTGFGIITDSGLTNSGFGNTGTDVSG 480 AGFVNTGFDNSGNVNTGNGNSGNINTGSWNAGNVNTGFGIITDSGLTNSGFGNTGTDVSG Sbjct 421 AGFVNTGFDNSGNVNTGNGNSGNINTGSWNAGNVNTGFGIITDSGLTNSGFGNTGTDVSG 480 Query 481 FFNTPTGPLAVDVSGFFNTASGGTVINGQTSGIGNIGVPGTLFGSVRSGLNTGLFNMGTA 540 FFNTPTGPLAVDVSGFFNTASGGTVINGQTSGIGNIGVPGTLFGSVRSGLNTGLFNMGTA Sbjct 481 FFNTPTGPLAVDVSGFFNTASGGTVINGQTSGIGNIGVPGTLFGSVRSGLNTGLFNMGTA 540 Query 541 ISGLFNLRQLLG 552 ISGLFNLRQLLG Sbjct 541 ISGLFNLRQLLG 552 >gi|289571800|ref|ZP_06452027.1| PPE family protein [Mycobacterium tuberculosis T17] gi|289755687|ref|ZP_06515065.1| predicted protein [Mycobacterium tuberculosis EAS054] gi|289545554|gb|EFD49202.1| PPE family protein [Mycobacterium tuberculosis T17] gi|289696274|gb|EFD63703.1| predicted protein [Mycobacterium tuberculosis EAS054] Length=552 Score = 1011 bits (2615), Expect = 0.0, Method: Compositional matrix adjust. Identities = 551/552 (99%), Positives = 551/552 (99%), Gaps = 0/552 (0%) Query 1 MAHFSVLPPEINSLRMYLGAGSAPMLQAAAAWDGLAAELGTAASSFSSVTTGLTGQAWQG 60 MAHFSVLPPEINSLRMYLGAGSAPMLQAAAAWDGLAAELGTAASSFSSVTTGLTGQAWQG Sbjct 1 MAHFSVLPPEINSLRMYLGAGSAPMLQAAAAWDGLAAELGTAASSFSSVTTGLTGQAWQG 60 Query 61 PASAAMAAAAAPYAGFLTTASAQAQLAAGQAKAVASVFEAAKAAIVPPAAVAANREAFLA 120 PASAAMAAAAAPYAGFLTTASAQAQLAAGQAKAVASVFEAAKAAIVPPAAVAANREAFLA Sbjct 61 PASAAMAAAAAPYAGFLTTASAQAQLAAGQAKAVASVFEAAKAAIVPPAAVAANREAFLA 120 Query 121 LIRSNWLGLNAPWIAAVESLYEEYWAADVAAMTGYHAGASQAAAQLPLPAGLQQFLNTLP 180 LIRSNWLGLNAPWIAAVESLYEEYWAADVAAMTGYHAGASQAAAQLPLPAGLQQFLNTLP Sbjct 121 LIRSNWLGLNAPWIAAVESLYEEYWAADVAAMTGYHAGASQAAAQLPLPAGLQQFLNTLP 180 Query 181 NLGIGNQGNANLGGGNTGSGNIGNGNKGSSNLGGGNIGNNNIGSGNRGSDNFGAGNVGTG 240 NLGIGNQGNANLGGGNTGSGNIGNGNKGSSNLGGGNIGNNNIGSGNRGSDNFGAGNVGTG Sbjct 181 NLGIGNQGNANLGGGNTGSGNIGNGNKGSSNLGGGNIGNNNIGSGNRGSDNFGAGNVGTG 240 Query 241 NIGFGNQGPIDVNLLATPGQNNVGLGNIGNNNMGFGNTGDANTGGGNTGNGNIGGGNTGN 300 NIGFGNQGPIDVNLLATPGQNNVGLGNIGNNNMGFGNTGDANTGGGNTGNGNIGGGNTGN Sbjct 241 NIGFGNQGPIDVNLLATPGQNNVGLGNIGNNNMGFGNTGDANTGGGNTGNGNIGGGNTGN 300 Query 301 NNFGFGNTGNNNIGIGLTGNNQMGINLAGLLNSGSGNIGIGNSGTNNIGLFNSGSGNIGV 360 NNFGF NTGNNNIGIGLTGNNQMGINLAGLLNSGSGNIGIGNSGTNNIGLFNSGSGNIGV Sbjct 301 NNFGFSNTGNNNIGIGLTGNNQMGINLAGLLNSGSGNIGIGNSGTNNIGLFNSGSGNIGV 360 Query 361 FNTGANTLVPGDLNNLGVGNSGNANIGFGNAGVLNTGFGNASILNTGLGNAGELNTGFGN 420 FNTGANTLVPGDLNNLGVGNSGNANIGFGNAGVLNTGFGNASILNTGLGNAGELNTGFGN Sbjct 361 FNTGANTLVPGDLNNLGVGNSGNANIGFGNAGVLNTGFGNASILNTGLGNAGELNTGFGN 420 Query 421 AGFVNTGFDNSGNVNTGNGNSGNINTGSWNAGNVNTGFGIITDSGLTNSGFGNTGTDVSG 480 AGFVNTGFDNSGNVNTGNGNSGNINTGSWNAGNVNTGFGIITDSGLTNSGFGNTGTDVSG Sbjct 421 AGFVNTGFDNSGNVNTGNGNSGNINTGSWNAGNVNTGFGIITDSGLTNSGFGNTGTDVSG 480 Query 481 FFNTPTGPLAVDVSGFFNTASGGTVINGQTSGIGNIGVPGTLFGSVRSGLNTGLFNMGTA 540 FFNTPTGPLAVDVSGFFNTASGGTVINGQTSGIGNIGVPGTLFGSVRSGLNTGLFNMGTA Sbjct 481 FFNTPTGPLAVDVSGFFNTASGGTVINGQTSGIGNIGVPGTLFGSVRSGLNTGLFNMGTA 540 Query 541 ISGLFNLRQLLG 552 ISGLFNLRQLLG Sbjct 541 ISGLFNLRQLLG 552 >gi|289445150|ref|ZP_06434894.1| PPE family protein [Mycobacterium tuberculosis CPHL_A] gi|289418108|gb|EFD15309.1| PPE family protein [Mycobacterium tuberculosis CPHL_A] Length=552 Score = 1011 bits (2613), Expect = 0.0, Method: Compositional matrix adjust. Identities = 551/552 (99%), Positives = 552/552 (100%), Gaps = 0/552 (0%) Query 1 MAHFSVLPPEINSLRMYLGAGSAPMLQAAAAWDGLAAELGTAASSFSSVTTGLTGQAWQG 60 MAHFSVLPPEI+SLRMYLGAGSAPMLQAAAAWDGLAAELGTAASSFSSVTTGLTGQAWQG Sbjct 1 MAHFSVLPPEIDSLRMYLGAGSAPMLQAAAAWDGLAAELGTAASSFSSVTTGLTGQAWQG 60 Query 61 PASAAMAAAAAPYAGFLTTASAQAQLAAGQAKAVASVFEAAKAAIVPPAAVAANREAFLA 120 PASAAMAAAAAPYAGFLTTASAQAQLAAGQAKAVASVFEAAKAAIVPPAAVAANREAFLA Sbjct 61 PASAAMAAAAAPYAGFLTTASAQAQLAAGQAKAVASVFEAAKAAIVPPAAVAANREAFLA 120 Query 121 LIRSNWLGLNAPWIAAVESLYEEYWAADVAAMTGYHAGASQAAAQLPLPAGLQQFLNTLP 180 LIRSNWLGLNAPWIAAVESLYEEYWAADVAAMTGYHAGASQAAAQLPLPAGLQQFLNTLP Sbjct 121 LIRSNWLGLNAPWIAAVESLYEEYWAADVAAMTGYHAGASQAAAQLPLPAGLQQFLNTLP 180 Query 181 NLGIGNQGNANLGGGNTGSGNIGNGNKGSSNLGGGNIGNNNIGSGNRGSDNFGAGNVGTG 240 NLGIGNQGNANLGGGNTGSGNIGNGNKGSSNLGGGNIGNNNIGSGNRGSDNFGAGNVGTG Sbjct 181 NLGIGNQGNANLGGGNTGSGNIGNGNKGSSNLGGGNIGNNNIGSGNRGSDNFGAGNVGTG 240 Query 241 NIGFGNQGPIDVNLLATPGQNNVGLGNIGNNNMGFGNTGDANTGGGNTGNGNIGGGNTGN 300 NIGFGNQGPIDVNLLATPGQNNVGLGNIGNNNMGFGNTGDANTGGGNTGNGNIGGGNTGN Sbjct 241 NIGFGNQGPIDVNLLATPGQNNVGLGNIGNNNMGFGNTGDANTGGGNTGNGNIGGGNTGN 300 Query 301 NNFGFGNTGNNNIGIGLTGNNQMGINLAGLLNSGSGNIGIGNSGTNNIGLFNSGSGNIGV 360 NNFGFGNTGNNNIGIGLTGNNQMGINLAGLLNSGSGNIGIGNSGTNNIGLFNSGSGNIGV Sbjct 301 NNFGFGNTGNNNIGIGLTGNNQMGINLAGLLNSGSGNIGIGNSGTNNIGLFNSGSGNIGV 360 Query 361 FNTGANTLVPGDLNNLGVGNSGNANIGFGNAGVLNTGFGNASILNTGLGNAGELNTGFGN 420 FNTGANTLVPGDLNNLGVGNSGNANIGFGNAGVLNTGFGNASILNTGLGNAGELNTGFGN Sbjct 361 FNTGANTLVPGDLNNLGVGNSGNANIGFGNAGVLNTGFGNASILNTGLGNAGELNTGFGN 420 Query 421 AGFVNTGFDNSGNVNTGNGNSGNINTGSWNAGNVNTGFGIITDSGLTNSGFGNTGTDVSG 480 AGFVNTGFDNSGNVNTGNGNSGNINTGSWNAGNVNTGFGIITDSGLTNSGFGNTGTDVSG Sbjct 421 AGFVNTGFDNSGNVNTGNGNSGNINTGSWNAGNVNTGFGIITDSGLTNSGFGNTGTDVSG 480 Query 481 FFNTPTGPLAVDVSGFFNTASGGTVINGQTSGIGNIGVPGTLFGSVRSGLNTGLFNMGTA 540 FFNTPTGPLAVDVSGFFNTASGGTVINGQTSGIGNIGVPGTLFGSVRSGLNTGLFNMGTA Sbjct 481 FFNTPTGPLAVDVSGFFNTASGGTVINGQTSGIGNIGVPGTLFGSVRSGLNTGLFNMGTA 540 Query 541 ISGLFNLRQLLG 552 ISGLFNLRQLLG Sbjct 541 ISGLFNLRQLLG 552 >gi|340628522|ref|YP_004746974.1| PPE family protein [Mycobacterium canettii CIPT 140010059] gi|340006712|emb|CCC45900.1| PPE family protein [Mycobacterium canettii CIPT 140010059] Length=552 Score = 1009 bits (2609), Expect = 0.0, Method: Compositional matrix adjust. Identities = 551/552 (99%), Positives = 552/552 (100%), Gaps = 0/552 (0%) Query 1 MAHFSVLPPEINSLRMYLGAGSAPMLQAAAAWDGLAAELGTAASSFSSVTTGLTGQAWQG 60 MAHFSVLPPEINSLRMYLGAGSAPMLQAAAAWDGLAAELGTAASSFSSVTTGLTGQAWQG Sbjct 1 MAHFSVLPPEINSLRMYLGAGSAPMLQAAAAWDGLAAELGTAASSFSSVTTGLTGQAWQG 60 Query 61 PASAAMAAAAAPYAGFLTTASAQAQLAAGQAKAVASVFEAAKAAIVPPAAVAANREAFLA 120 PASAAMAAAAAPYAGFLTTASAQAQLAAGQAKAVASVFEAAKAAIVPPAAVAANREAFLA Sbjct 61 PASAAMAAAAAPYAGFLTTASAQAQLAAGQAKAVASVFEAAKAAIVPPAAVAANREAFLA 120 Query 121 LIRSNWLGLNAPWIAAVESLYEEYWAADVAAMTGYHAGASQAAAQLPLPAGLQQFLNTLP 180 LIRSNWLGLNAPWIAAVESLYEEYWAADVAAMTGYHAGASQAAAQLPLPAGLQQFLNTLP Sbjct 121 LIRSNWLGLNAPWIAAVESLYEEYWAADVAAMTGYHAGASQAAAQLPLPAGLQQFLNTLP 180 Query 181 NLGIGNQGNANLGGGNTGSGNIGNGNKGSSNLGGGNIGNNNIGSGNRGSDNFGAGNVGTG 240 NLGIGNQGNANLGGGNTGSGNIGNGNKGSSNLGGGNIGNNNIGSGNRGSDNFGAGNVGTG Sbjct 181 NLGIGNQGNANLGGGNTGSGNIGNGNKGSSNLGGGNIGNNNIGSGNRGSDNFGAGNVGTG 240 Query 241 NIGFGNQGPIDVNLLATPGQNNVGLGNIGNNNMGFGNTGDANTGGGNTGNGNIGGGNTGN 300 NIGFGNQGPIDVNLLATPGQNNVGLGNIGNNNMGFGNTGDANTGGGNTGNGNIGGGNTGN Sbjct 241 NIGFGNQGPIDVNLLATPGQNNVGLGNIGNNNMGFGNTGDANTGGGNTGNGNIGGGNTGN 300 Query 301 NNFGFGNTGNNNIGIGLTGNNQMGINLAGLLNSGSGNIGIGNSGTNNIGLFNSGSGNIGV 360 NNFGFGNTGNNNIGIGLTGNNQMGINLAGLLNSG+GNIGIGNSGTNNIGLFNSGSGNIGV Sbjct 301 NNFGFGNTGNNNIGIGLTGNNQMGINLAGLLNSGNGNIGIGNSGTNNIGLFNSGSGNIGV 360 Query 361 FNTGANTLVPGDLNNLGVGNSGNANIGFGNAGVLNTGFGNASILNTGLGNAGELNTGFGN 420 FNTGANTLVPGDLNNLGVGNSGNANIGFGNAGVLNTGFGNASILNTGLGNAGELNTGFGN Sbjct 361 FNTGANTLVPGDLNNLGVGNSGNANIGFGNAGVLNTGFGNASILNTGLGNAGELNTGFGN 420 Query 421 AGFVNTGFDNSGNVNTGNGNSGNINTGSWNAGNVNTGFGIITDSGLTNSGFGNTGTDVSG 480 AGFVNTGFDNSGNVNTGNGNSGNINTGSWNAGNVNTGFGIITDSGLTNSGFGNTGTDVSG Sbjct 421 AGFVNTGFDNSGNVNTGNGNSGNINTGSWNAGNVNTGFGIITDSGLTNSGFGNTGTDVSG 480 Query 481 FFNTPTGPLAVDVSGFFNTASGGTVINGQTSGIGNIGVPGTLFGSVRSGLNTGLFNMGTA 540 FFNTPTGPLAVDVSGFFNTASGGTVINGQTSGIGNIGVPGTLFGSVRSGLNTGLFNMGTA Sbjct 481 FFNTPTGPLAVDVSGFFNTASGGTVINGQTSGIGNIGVPGTLFGSVRSGLNTGLFNMGTA 540 Query 541 ISGLFNLRQLLG 552 ISGLFNLRQLLG Sbjct 541 ISGLFNLRQLLG 552 >gi|15843170|ref|NP_338207.1| PPE family protein [Mycobacterium tuberculosis CDC1551] gi|13883522|gb|AAK48021.1| PPE family protein [Mycobacterium tuberculosis CDC1551] Length=623 Score = 1008 bits (2605), Expect = 0.0, Method: Compositional matrix adjust. Identities = 549/552 (99%), Positives = 549/552 (99%), Gaps = 0/552 (0%) Query 1 MAHFSVLPPEINSLRMYLGAGSAPMLQAAAAWDGLAAELGTAASSFSSVTTGLTGQAWQG 60 MAHFSVLPPEINSLRMYLGAGSAPMLQAAAAWDGLAAELGTAASSFSSVTTGLTGQAWQG Sbjct 1 MAHFSVLPPEINSLRMYLGAGSAPMLQAAAAWDGLAAELGTAASSFSSVTTGLTGQAWQG 60 Query 61 PASAAMAAAAAPYAGFLTTASAQAQLAAGQAKAVASVFEAAKAAIVPPAAVAANREAFLA 120 PASAAMAAAAAPYAGFLTTASAQAQLAAGQAKAVASVFEAAKAAIVPPAAVAANREAFLA Sbjct 61 PASAAMAAAAAPYAGFLTTASAQAQLAAGQAKAVASVFEAAKAAIVPPAAVAANREAFLA 120 Query 121 LIRSNWLGLNAPWIAAVESLYEEYWAADVAAMTGYHAGASQAAAQLPLPAGLQQFLNTLP 180 LIRSNWLGLNAPWIAAVESLYEEYWAADVAAMTGYHAGASQAAAQLPLPAGLQQFLNTLP Sbjct 121 LIRSNWLGLNAPWIAAVESLYEEYWAADVAAMTGYHAGASQAAAQLPLPAGLQQFLNTLP 180 Query 181 NLGIGNQGNANLGGGNTGSGNIGNGNKGSSNLGGGNIGNNNIGSGNRGSDNFGAGNVGTG 240 NLGIGNQGNANLGGGNTGSGNIGNGNKGSSNLGGGNIGNNNIGSGNRGSDNFGAGNVGTG Sbjct 181 NLGIGNQGNANLGGGNTGSGNIGNGNKGSSNLGGGNIGNNNIGSGNRGSDNFGAGNVGTG 240 Query 241 NIGFGNQGPIDVNLLATPGQNNVGLGNIGNNNMGFGNTGDANTGGGNTGNGNIGGGNTGN 300 NIGFGNQGPIDVNLLATPGQNNVGLGNIGNNNMGFGNTGDANTGGGNTGNGNIGGGNTGN Sbjct 241 NIGFGNQGPIDVNLLATPGQNNVGLGNIGNNNMGFGNTGDANTGGGNTGNGNIGGGNTGN 300 Query 301 NNFGFGNTGNNNIGIGLTGNNQMGINLAGLLNSGSGNIGIGNSGTNNIGLFNSGSGNIGV 360 NNFGFGNTGNNNIGIGLTGNNQMGINLAGLLNSGSGNIGIGNSGTNNIGLFNSGSGNIGV Sbjct 301 NNFGFGNTGNNNIGIGLTGNNQMGINLAGLLNSGSGNIGIGNSGTNNIGLFNSGSGNIGV 360 Query 361 FNTGANTLVPGDLNNLGVGNSGNANIGFGNAGVLNTGFGNASILNTGLGNAGELNTGFGN 420 FNTGANTLVPGDLNNLGVGNSGNANIGFGNAGVLNTGFGNASILNTGLGNAGELNTGFGN Sbjct 361 FNTGANTLVPGDLNNLGVGNSGNANIGFGNAGVLNTGFGNASILNTGLGNAGELNTGFGN 420 Query 421 AGFVNTGFDNSGNVNTGNGNSGNINTGSWNAGNVNTGFGIITDSGLTNSGFGNTGTDVSG 480 AGFVNTGFDNSGNVNTGNGNSGNINTGSWNAGNVNTGFGIITDSGLTNSGFGNTGTDVSG Sbjct 421 AGFVNTGFDNSGNVNTGNGNSGNINTGSWNAGNVNTGFGIITDSGLTNSGFGNTGTDVSG 480 Query 481 FFNTPTGPLAVDVSGFFNTASGGTVINGQTSGIGNIGVPGTLFGSVRSGLNTGLFNMGTA 540 FFNTPTGPLAVDVSGFFNTASGGTVINGQTSGIGNIGVPGTLFGSVRSGLNTGLFNMGTA Sbjct 481 FFNTPTGPLAVDVSGFFNTASGGTVINGQTSGIGNIGVPGTLFGSVRSGLNTGLFNMGTA 540 Query 541 ISGLFNLRQLLG 552 ISGLFNLR G Sbjct 541 ISGLFNLRHCWG 552 >gi|253800599|ref|YP_003033600.1| PPE family protein [Mycobacterium tuberculosis KZN 1435] gi|289555823|ref|ZP_06445033.1| predicted protein [Mycobacterium tuberculosis KZN 605] gi|253322102|gb|ACT26705.1| PPE family protein [Mycobacterium tuberculosis KZN 1435] gi|289440455|gb|EFD22948.1| predicted protein [Mycobacterium tuberculosis KZN 605] gi|328460330|gb|AEB05753.1| hypothetical protein TBSG_03624 [Mycobacterium tuberculosis KZN 4207] Length=631 Score = 818 bits (2112), Expect = 0.0, Method: Compositional matrix adjust. Identities = 550/552 (99%), Positives = 550/552 (99%), Gaps = 1/552 (0%) Query 1 MAHFSVLPPEINSLRMYLGAGSAPMLQAAAAWDGLAAELGTAASSFSSVTTGLTGQAWQG 60 MAHFSVLPPEINSLRMYLGAGSAPMLQAAA WDGLAAELGTAASSFSSVTTGLTGQAWQG Sbjct 81 MAHFSVLPPEINSLRMYLGAGSAPMLQAAA-WDGLAAELGTAASSFSSVTTGLTGQAWQG 139 Query 61 PASAAMAAAAAPYAGFLTTASAQAQLAAGQAKAVASVFEAAKAAIVPPAAVAANREAFLA 120 PASAAMAAAAAPYAGFLTTASAQAQLAAGQAKAVASVFEAAKAAIVPPAAVAANREAFLA Sbjct 140 PASAAMAAAAAPYAGFLTTASAQAQLAAGQAKAVASVFEAAKAAIVPPAAVAANREAFLA 199 Query 121 LIRSNWLGLNAPWIAAVESLYEEYWAADVAAMTGYHAGASQAAAQLPLPAGLQQFLNTLP 180 LIRSNWLGLNAPWIAAVESLYEEYWAADVAAMTGYHAGASQAAAQLPLPAGLQQFLNTLP Sbjct 200 LIRSNWLGLNAPWIAAVESLYEEYWAADVAAMTGYHAGASQAAAQLPLPAGLQQFLNTLP 259 Query 181 NLGIGNQGNANLGGGNTGSGNIGNGNKGSSNLGGGNIGNNNIGSGNRGSDNFGAGNVGTG 240 NLGIGNQGNANLGGGNTGSGNIGNGNKGSSN GGGNIGNNNIGSGNRGSDNFGAGNVGTG Sbjct 260 NLGIGNQGNANLGGGNTGSGNIGNGNKGSSNFGGGNIGNNNIGSGNRGSDNFGAGNVGTG 319 Query 241 NIGFGNQGPIDVNLLATPGQNNVGLGNIGNNNMGFGNTGDANTGGGNTGNGNIGGGNTGN 300 NIGFGNQGPIDVNLLATPGQNNVGLGNIGNNNMGFGNTGDANTGGGNTGNGNIGGGNTGN Sbjct 320 NIGFGNQGPIDVNLLATPGQNNVGLGNIGNNNMGFGNTGDANTGGGNTGNGNIGGGNTGN 379 Query 301 NNFGFGNTGNNNIGIGLTGNNQMGINLAGLLNSGSGNIGIGNSGTNNIGLFNSGSGNIGV 360 NNFGFGNTGNNNIGIGLTGNNQMGINLAGLLNSGSGNIGIGNSGTNNIGLFNSGSGNIGV Sbjct 380 NNFGFGNTGNNNIGIGLTGNNQMGINLAGLLNSGSGNIGIGNSGTNNIGLFNSGSGNIGV 439 Query 361 FNTGANTLVPGDLNNLGVGNSGNANIGFGNAGVLNTGFGNASILNTGLGNAGELNTGFGN 420 FNTGANTLVPGDLNNLGVGNSGNANIGFGNAGVLNTGFGNASILNTGLGNAGELNTGFGN Sbjct 440 FNTGANTLVPGDLNNLGVGNSGNANIGFGNAGVLNTGFGNASILNTGLGNAGELNTGFGN 499 Query 421 AGFVNTGFDNSGNVNTGNGNSGNINTGSWNAGNVNTGFGIITDSGLTNSGFGNTGTDVSG 480 AGFVNTGFDNSGNVNTGNGNSGNINTGSWNAGNVNTGFGIITDSGLTNSGFGNTGTDVSG Sbjct 500 AGFVNTGFDNSGNVNTGNGNSGNINTGSWNAGNVNTGFGIITDSGLTNSGFGNTGTDVSG 559 Query 481 FFNTPTGPLAVDVSGFFNTASGGTVINGQTSGIGNIGVPGTLFGSVRSGLNTGLFNMGTA 540 FFNTPTGPLAVDVSGFFNTASGGTVINGQTSGIGNIGVPGTLFGSVRSGLNTGLFNMGTA Sbjct 560 FFNTPTGPLAVDVSGFFNTASGGTVINGQTSGIGNIGVPGTLFGSVRSGLNTGLFNMGTA 619 Query 541 ISGLFNLRQLLG 552 ISGLFNLRQLLG Sbjct 620 ISGLFNLRQLLG 631 >gi|297636230|ref|ZP_06954010.1| PPE family protein [Mycobacterium tuberculosis KZN 4207] gi|297733224|ref|ZP_06962342.1| PPE family protein [Mycobacterium tuberculosis KZN R506] gi|313660554|ref|ZP_07817434.1| PPE family protein [Mycobacterium tuberculosis KZN V2475] Length=551 Score = 814 bits (2103), Expect = 0.0, Method: Compositional matrix adjust. Identities = 550/552 (99%), Positives = 550/552 (99%), Gaps = 1/552 (0%) Query 1 MAHFSVLPPEINSLRMYLGAGSAPMLQAAAAWDGLAAELGTAASSFSSVTTGLTGQAWQG 60 MAHFSVLPPEINSLRMYLGAGSAPMLQAAA WDGLAAELGTAASSFSSVTTGLTGQAWQG Sbjct 1 MAHFSVLPPEINSLRMYLGAGSAPMLQAAA-WDGLAAELGTAASSFSSVTTGLTGQAWQG 59 Query 61 PASAAMAAAAAPYAGFLTTASAQAQLAAGQAKAVASVFEAAKAAIVPPAAVAANREAFLA 120 PASAAMAAAAAPYAGFLTTASAQAQLAAGQAKAVASVFEAAKAAIVPPAAVAANREAFLA Sbjct 60 PASAAMAAAAAPYAGFLTTASAQAQLAAGQAKAVASVFEAAKAAIVPPAAVAANREAFLA 119 Query 121 LIRSNWLGLNAPWIAAVESLYEEYWAADVAAMTGYHAGASQAAAQLPLPAGLQQFLNTLP 180 LIRSNWLGLNAPWIAAVESLYEEYWAADVAAMTGYHAGASQAAAQLPLPAGLQQFLNTLP Sbjct 120 LIRSNWLGLNAPWIAAVESLYEEYWAADVAAMTGYHAGASQAAAQLPLPAGLQQFLNTLP 179 Query 181 NLGIGNQGNANLGGGNTGSGNIGNGNKGSSNLGGGNIGNNNIGSGNRGSDNFGAGNVGTG 240 NLGIGNQGNANLGGGNTGSGNIGNGNKGSSN GGGNIGNNNIGSGNRGSDNFGAGNVGTG Sbjct 180 NLGIGNQGNANLGGGNTGSGNIGNGNKGSSNFGGGNIGNNNIGSGNRGSDNFGAGNVGTG 239 Query 241 NIGFGNQGPIDVNLLATPGQNNVGLGNIGNNNMGFGNTGDANTGGGNTGNGNIGGGNTGN 300 NIGFGNQGPIDVNLLATPGQNNVGLGNIGNNNMGFGNTGDANTGGGNTGNGNIGGGNTGN Sbjct 240 NIGFGNQGPIDVNLLATPGQNNVGLGNIGNNNMGFGNTGDANTGGGNTGNGNIGGGNTGN 299 Query 301 NNFGFGNTGNNNIGIGLTGNNQMGINLAGLLNSGSGNIGIGNSGTNNIGLFNSGSGNIGV 360 NNFGFGNTGNNNIGIGLTGNNQMGINLAGLLNSGSGNIGIGNSGTNNIGLFNSGSGNIGV Sbjct 300 NNFGFGNTGNNNIGIGLTGNNQMGINLAGLLNSGSGNIGIGNSGTNNIGLFNSGSGNIGV 359 Query 361 FNTGANTLVPGDLNNLGVGNSGNANIGFGNAGVLNTGFGNASILNTGLGNAGELNTGFGN 420 FNTGANTLVPGDLNNLGVGNSGNANIGFGNAGVLNTGFGNASILNTGLGNAGELNTGFGN Sbjct 360 FNTGANTLVPGDLNNLGVGNSGNANIGFGNAGVLNTGFGNASILNTGLGNAGELNTGFGN 419 Query 421 AGFVNTGFDNSGNVNTGNGNSGNINTGSWNAGNVNTGFGIITDSGLTNSGFGNTGTDVSG 480 AGFVNTGFDNSGNVNTGNGNSGNINTGSWNAGNVNTGFGIITDSGLTNSGFGNTGTDVSG Sbjct 420 AGFVNTGFDNSGNVNTGNGNSGNINTGSWNAGNVNTGFGIITDSGLTNSGFGNTGTDVSG 479 Query 481 FFNTPTGPLAVDVSGFFNTASGGTVINGQTSGIGNIGVPGTLFGSVRSGLNTGLFNMGTA 540 FFNTPTGPLAVDVSGFFNTASGGTVINGQTSGIGNIGVPGTLFGSVRSGLNTGLFNMGTA Sbjct 480 FFNTPTGPLAVDVSGFFNTASGGTVINGQTSGIGNIGVPGTLFGSVRSGLNTGLFNMGTA 539 Query 541 ISGLFNLRQLLG 552 ISGLFNLRQLLG Sbjct 540 ISGLFNLRQLLG 551 >gi|148824764|ref|YP_001289518.1| PPE family protein [Mycobacterium tuberculosis F11] gi|254552665|ref|ZP_05143112.1| PPE family protein [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|148723291|gb|ABR07916.1| PPE family protein [Mycobacterium tuberculosis F11] gi|344221390|gb|AEN02021.1| PPE family protein [Mycobacterium tuberculosis CTRI-2] Length=551 Score = 814 bits (2103), Expect = 0.0, Method: Compositional matrix adjust. Identities = 551/552 (99%), Positives = 551/552 (99%), Gaps = 1/552 (0%) Query 1 MAHFSVLPPEINSLRMYLGAGSAPMLQAAAAWDGLAAELGTAASSFSSVTTGLTGQAWQG 60 MAHFSVLPPEINSLRMYLGAGSAPMLQAAA WDGLAAELGTAASSFSSVTTGLTGQAWQG Sbjct 1 MAHFSVLPPEINSLRMYLGAGSAPMLQAAA-WDGLAAELGTAASSFSSVTTGLTGQAWQG 59 Query 61 PASAAMAAAAAPYAGFLTTASAQAQLAAGQAKAVASVFEAAKAAIVPPAAVAANREAFLA 120 PASAAMAAAAAPYAGFLTTASAQAQLAAGQAKAVASVFEAAKAAIVPPAAVAANREAFLA Sbjct 60 PASAAMAAAAAPYAGFLTTASAQAQLAAGQAKAVASVFEAAKAAIVPPAAVAANREAFLA 119 Query 121 LIRSNWLGLNAPWIAAVESLYEEYWAADVAAMTGYHAGASQAAAQLPLPAGLQQFLNTLP 180 LIRSNWLGLNAPWIAAVESLYEEYWAADVAAMTGYHAGASQAAAQLPLPAGLQQFLNTLP Sbjct 120 LIRSNWLGLNAPWIAAVESLYEEYWAADVAAMTGYHAGASQAAAQLPLPAGLQQFLNTLP 179 Query 181 NLGIGNQGNANLGGGNTGSGNIGNGNKGSSNLGGGNIGNNNIGSGNRGSDNFGAGNVGTG 240 NLGIGNQGNANLGGGNTGSGNIGNGNKGSSNLGGGNIGNNNIGSGNRGSDNFGAGNVGTG Sbjct 180 NLGIGNQGNANLGGGNTGSGNIGNGNKGSSNLGGGNIGNNNIGSGNRGSDNFGAGNVGTG 239 Query 241 NIGFGNQGPIDVNLLATPGQNNVGLGNIGNNNMGFGNTGDANTGGGNTGNGNIGGGNTGN 300 NIGFGNQGPIDVNLLATPGQNNVGLGNIGNNNMGFGNTGDANTGGGNTGNGNIGGGNTGN Sbjct 240 NIGFGNQGPIDVNLLATPGQNNVGLGNIGNNNMGFGNTGDANTGGGNTGNGNIGGGNTGN 299 Query 301 NNFGFGNTGNNNIGIGLTGNNQMGINLAGLLNSGSGNIGIGNSGTNNIGLFNSGSGNIGV 360 NNFGFGNTGNNNIGIGLTGNNQMGINLAGLLNSGSGNIGIGNSGTNNIGLFNSGSGNIGV Sbjct 300 NNFGFGNTGNNNIGIGLTGNNQMGINLAGLLNSGSGNIGIGNSGTNNIGLFNSGSGNIGV 359 Query 361 FNTGANTLVPGDLNNLGVGNSGNANIGFGNAGVLNTGFGNASILNTGLGNAGELNTGFGN 420 FNTGANTLVPGDLNNLGVGNSGNANIGFGNAGVLNTGFGNASILNTGLGNAGELNTGFGN Sbjct 360 FNTGANTLVPGDLNNLGVGNSGNANIGFGNAGVLNTGFGNASILNTGLGNAGELNTGFGN 419 Query 421 AGFVNTGFDNSGNVNTGNGNSGNINTGSWNAGNVNTGFGIITDSGLTNSGFGNTGTDVSG 480 AGFVNTGFDNSGNVNTGNGNSGNINTGSWNAGNVNTGFGIITDSGLTNSGFGNTGTDVSG Sbjct 420 AGFVNTGFDNSGNVNTGNGNSGNINTGSWNAGNVNTGFGIITDSGLTNSGFGNTGTDVSG 479 Query 481 FFNTPTGPLAVDVSGFFNTASGGTVINGQTSGIGNIGVPGTLFGSVRSGLNTGLFNMGTA 540 FFNTPTGPLAVDVSGFFNTASGGTVINGQTSGIGNIGVPGTLFGSVRSGLNTGLFNMGTA Sbjct 480 FFNTPTGPLAVDVSGFFNTASGGTVINGQTSGIGNIGVPGTLFGSVRSGLNTGLFNMGTA 539 Query 541 ISGLFNLRQLLG 552 ISGLFNLRQLLG Sbjct 540 ISGLFNLRQLLG 551 >gi|289763736|ref|ZP_06523114.1| PPE family protein [Mycobacterium tuberculosis GM 1503] gi|289711242|gb|EFD75258.1| PPE family protein [Mycobacterium tuberculosis GM 1503] Length=551 Score = 812 bits (2097), Expect = 0.0, Method: Compositional matrix adjust. Identities = 550/552 (99%), Positives = 550/552 (99%), Gaps = 1/552 (0%) Query 1 MAHFSVLPPEINSLRMYLGAGSAPMLQAAAAWDGLAAELGTAASSFSSVTTGLTGQAWQG 60 MAHFSVLPPEINSLRMYLGAGSAPMLQAAA WDGLAAELGTAASSFSSVTTGLTGQAWQG Sbjct 1 MAHFSVLPPEINSLRMYLGAGSAPMLQAAA-WDGLAAELGTAASSFSSVTTGLTGQAWQG 59 Query 61 PASAAMAAAAAPYAGFLTTASAQAQLAAGQAKAVASVFEAAKAAIVPPAAVAANREAFLA 120 PASAAMAAAAAPYAGFLTTASAQAQLAAGQAKAVASVFEAAKAAIVPPAAVAANREAFLA Sbjct 60 PASAAMAAAAAPYAGFLTTASAQAQLAAGQAKAVASVFEAAKAAIVPPAAVAANREAFLA 119 Query 121 LIRSNWLGLNAPWIAAVESLYEEYWAADVAAMTGYHAGASQAAAQLPLPAGLQQFLNTLP 180 LIRSNWLGLNAPWIAAVESLYEEYWAADVAAMTGYHAGASQAAAQLPLPAGLQQFLNTLP Sbjct 120 LIRSNWLGLNAPWIAAVESLYEEYWAADVAAMTGYHAGASQAAAQLPLPAGLQQFLNTLP 179 Query 181 NLGIGNQGNANLGGGNTGSGNIGNGNKGSSNLGGGNIGNNNIGSGNRGSDNFGAGNVGTG 240 NLGIGNQGNANLGGGNTGSGNIGNGNKGSSNLGGGNIGNNNIGSGNRGSDNFGAGNVGTG Sbjct 180 NLGIGNQGNANLGGGNTGSGNIGNGNKGSSNLGGGNIGNNNIGSGNRGSDNFGAGNVGTG 239 Query 241 NIGFGNQGPIDVNLLATPGQNNVGLGNIGNNNMGFGNTGDANTGGGNTGNGNIGGGNTGN 300 NIGFGNQGPIDVNLLATPGQNNVGLGNIGNNNMGFGNTGDANTGGGNTGNGNIGGGNTGN Sbjct 240 NIGFGNQGPIDVNLLATPGQNNVGLGNIGNNNMGFGNTGDANTGGGNTGNGNIGGGNTGN 299 Query 301 NNFGFGNTGNNNIGIGLTGNNQMGINLAGLLNSGSGNIGIGNSGTNNIGLFNSGSGNIGV 360 NNFGFGNTGNNNIGIGLTGNNQMGINLAGLLNSGSGNIG GNSGTNNIGLFNSGSGNIGV Sbjct 300 NNFGFGNTGNNNIGIGLTGNNQMGINLAGLLNSGSGNIGSGNSGTNNIGLFNSGSGNIGV 359 Query 361 FNTGANTLVPGDLNNLGVGNSGNANIGFGNAGVLNTGFGNASILNTGLGNAGELNTGFGN 420 FNTGANTLVPGDLNNLGVGNSGNANIGFGNAGVLNTGFGNASILNTGLGNAGELNTGFGN Sbjct 360 FNTGANTLVPGDLNNLGVGNSGNANIGFGNAGVLNTGFGNASILNTGLGNAGELNTGFGN 419 Query 421 AGFVNTGFDNSGNVNTGNGNSGNINTGSWNAGNVNTGFGIITDSGLTNSGFGNTGTDVSG 480 AGFVNTGFDNSGNVNTGNGNSGNINTGSWNAGNVNTGFGIITDSGLTNSGFGNTGTDVSG Sbjct 420 AGFVNTGFDNSGNVNTGNGNSGNINTGSWNAGNVNTGFGIITDSGLTNSGFGNTGTDVSG 479 Query 481 FFNTPTGPLAVDVSGFFNTASGGTVINGQTSGIGNIGVPGTLFGSVRSGLNTGLFNMGTA 540 FFNTPTGPLAVDVSGFFNTASGGTVINGQTSGIGNIGVPGTLFGSVRSGLNTGLFNMGTA Sbjct 480 FFNTPTGPLAVDVSGFFNTASGGTVINGQTSGIGNIGVPGTLFGSVRSGLNTGLFNMGTA 539 Query 541 ISGLFNLRQLLG 552 ISGLFNLRQLLG Sbjct 540 ISGLFNLRQLLG 551 >gi|289747395|ref|ZP_06506773.1| predicted protein [Mycobacterium tuberculosis 02_1987] gi|289687923|gb|EFD55411.1| predicted protein [Mycobacterium tuberculosis 02_1987] Length=642 Score = 778 bits (2009), Expect = 0.0, Method: Compositional matrix adjust. Identities = 539/572 (95%), Positives = 540/572 (95%), Gaps = 30/572 (5%) Query 1 MAHFSVLPPEINSLRMYLGAGSAPMLQAAAAWDGLAAELGTAASSFSSVTTGLTGQAWQG 60 MAHFSVLPPEINSLRMYLGAGSAPMLQAAAAWDGLAAELGTAASSFSSVTTGLTGQAWQG Sbjct 81 MAHFSVLPPEINSLRMYLGAGSAPMLQAAAAWDGLAAELGTAASSFSSVTTGLTGQAWQG 140 Query 61 PASAAMAAAAAPYAGFLTTASAQAQLAAGQAKAVASVFEAAKAAIVPPAAVAANREAFLA 120 PASAAMAAAAAPYAGFLTTASAQAQLAAGQAKAVASVFEAAKAAIVPPAAVAANREAFLA Sbjct 141 PASAAMAAAAAPYAGFLTTASAQAQLAAGQAKAVASVFEAAKAAIVPPAAVAANREAFLA 200 Query 121 LIRSNWLGLNAPWIAAVESLYEEYWAADVAAMTGYHAGASQAAAQLPLPAGLQQFLNTLP 180 LIRSNWLGLNAPWIAAVESLYEEYWAADVAAMTGYHAGASQAAAQLPLPAGLQQFLNTLP Sbjct 201 LIRSNWLGLNAPWIAAVESLYEEYWAADVAAMTGYHAGASQAAAQLPLPAGLQQFLNTLP 260 Query 181 NLGIGNQGNANLGGGNTGSGNIGNGNKGSSNLGGGNIGNNNIGSGNRGSDNFGAGNVGTG 240 NLGIGNQGNANLGGGNTGSGNIGNGNKGSSNLGGGNIGNNNIGSGNRGSDNFGAGNVGTG Sbjct 261 NLGIGNQGNANLGGGNTGSGNIGNGNKGSSNLGGGNIGNNNIGSGNRGSDNFGAGNVGTG 320 Query 241 NIGFGNQGPIDVNLLATPGQNNVGLGNIGNNNMGFGNTGDANTGGGNTGNGNIGGGNTGN 300 NIGFGNQGPIDVNLLATPGQNNVGLGNIGNNNMGFGNTGDANTGGGNTGNGNIGGGNTGN Sbjct 321 NIGFGNQGPIDVNLLATPGQNNVGLGNIGNNNMGFGNTGDANTGGGNTGNGNIGGGNTGN 380 Query 301 NNFGFGN--------------------TGNNNIGIGLTGNNQMGINLAGLLNSGSGNIGI 340 NNFG GN TGNN +G INLAGLLNSGSGNIGI Sbjct 381 NNFGGGNTGNNNFGFGNTGNNNIGIGLTGNNQMG----------INLAGLLNSGSGNIGI 430 Query 341 GNSGTNNIGLFNSGSGNIGVFNTGANTLVPGDLNNLGVGNSGNANIGFGNAGVLNTGFGN 400 GNSGTNNIGLFNSGSGNIGVFNTGANTLVPGDLNNLGVGNSGNANIGFGNAGVLNTGFGN Sbjct 431 GNSGTNNIGLFNSGSGNIGVFNTGANTLVPGDLNNLGVGNSGNANIGFGNAGVLNTGFGN 490 Query 401 ASILNTGLGNAGELNTGFGNAGFVNTGFDNSGNVNTGNGNSGNINTGSWNAGNVNTGFGI 460 ASILNTGLGNAGELNTGFGNAGFVNTGFDNSGNVNTGNGNSGNINTGSWNAGNVNTGFGI Sbjct 491 ASILNTGLGNAGELNTGFGNAGFVNTGFDNSGNVNTGNGNSGNINTGSWNAGNVNTGFGI 550 Query 461 ITDSGLTNSGFGNTGTDVSGFFNTPTGPLAVDVSGFFNTASGGTVINGQTSGIGNIGVPG 520 ITDSGLTNSGFGNTGTDVSGFFNTPTGPLAVDVSGFFNTASGGTVINGQTSGIGNIGVPG Sbjct 551 ITDSGLTNSGFGNTGTDVSGFFNTPTGPLAVDVSGFFNTASGGTVINGQTSGIGNIGVPG 610 Query 521 TLFGSVRSGLNTGLFNMGTAISGLFNLRQLLG 552 TLFGSVRSGLNTGLFNMGTAISGLFNLRQLLG Sbjct 611 TLFGSVRSGLNTGLFNMGTAISGLFNLRQLLG 642 >gi|289572210|ref|ZP_06452437.1| predicted protein [Mycobacterium tuberculosis K85] gi|289536641|gb|EFD41219.1| predicted protein [Mycobacterium tuberculosis K85] Length=612 Score = 742 bits (1915), Expect = 0.0, Method: Compositional matrix adjust. Identities = 530/552 (97%), Positives = 531/552 (97%), Gaps = 20/552 (3%) Query 1 MAHFSVLPPEINSLRMYLGAGSAPMLQAAAAWDGLAAELGTAASSFSSVTTGLTGQAWQG 60 MAHFSVLPPEINSLRMYLGAGSAPMLQAAAAWDGLAAELGTAASSFSSVTTGLTGQAWQG Sbjct 81 MAHFSVLPPEINSLRMYLGAGSAPMLQAAAAWDGLAAELGTAASSFSSVTTGLTGQAWQG 140 Query 61 PASAAMAAAAAPYAGFLTTASAQAQLAAGQAKAVASVFEAAKAAIVPPAAVAANREAFLA 120 PASAAMAAAAAPYAGFLTTASAQAQLAAGQAKAVASVFEAAKAAIVPPAAVAANREAFLA Sbjct 141 PASAAMAAAAAPYAGFLTTASAQAQLAAGQAKAVASVFEAAKAAIVPPAAVAANREAFLA 200 Query 121 LIRSNWLGLNAPWIAAVESLYEEYWAADVAAMTGYHAGASQAAAQLPLPAGLQQFLNTLP 180 LIRSNWLGLNAPWIAAVESLYEEYWAADVAAMTGYHAGASQAAAQLPLPAGLQQFLNTLP Sbjct 201 LIRSNWLGLNAPWIAAVESLYEEYWAADVAAMTGYHAGASQAAAQLPLPAGLQQFLNTLP 260 Query 181 NLGIGNQGNANLGGGNTGSGNIGNGNKGSSNLGGGNIGNNNIGSGNRGSDNFGAGNVGTG 240 NLGIGNQGNANLGGGN G+ NNIGSGNRGSDNFGAGNVGTG Sbjct 261 NLGIGNQGNANLGGGNIGN--------------------NNIGSGNRGSDNFGAGNVGTG 300 Query 241 NIGFGNQGPIDVNLLATPGQNNVGLGNIGNNNMGFGNTGDANTGGGNTGNGNIGGGNTGN 300 NIGFGNQGPIDVNLLATPGQNNVGLGNIGNNNMGFGNTGDANTGGGNTGNGNIGGGNTGN Sbjct 301 NIGFGNQGPIDVNLLATPGQNNVGLGNIGNNNMGFGNTGDANTGGGNTGNGNIGGGNTGN 360 Query 301 NNFGFGNTGNNNIGIGLTGNNQMGINLAGLLNSGSGNIGIGNSGTNNIGLFNSGSGNIGV 360 NNFGFGNTGNNNIGIGLTGNNQMGINLAGLLNSGSGNIGIGNSGTNNIGLFNSGSGNIGV Sbjct 361 NNFGFGNTGNNNIGIGLTGNNQMGINLAGLLNSGSGNIGIGNSGTNNIGLFNSGSGNIGV 420 Query 361 FNTGANTLVPGDLNNLGVGNSGNANIGFGNAGVLNTGFGNASILNTGLGNAGELNTGFGN 420 FNTGANTLVPGDLNNLGVGNSGNANIGFGNAGVLNTGFGNASILNTGLGNAGELNTGFGN Sbjct 421 FNTGANTLVPGDLNNLGVGNSGNANIGFGNAGVLNTGFGNASILNTGLGNAGELNTGFGN 480 Query 421 AGFVNTGFDNSGNVNTGNGNSGNINTGSWNAGNVNTGFGIITDSGLTNSGFGNTGTDVSG 480 AGFVNTGFDNSGNVNTGNGNSGNINTGSWNAGNVNTGFGIITDSGLTNSGFGNTGTDVSG Sbjct 481 AGFVNTGFDNSGNVNTGNGNSGNINTGSWNAGNVNTGFGIITDSGLTNSGFGNTGTDVSG 540 Query 481 FFNTPTGPLAVDVSGFFNTASGGTVINGQTSGIGNIGVPGTLFGSVRSGLNTGLFNMGTA 540 FFNTPTGPLAVDVSGFFNTASGGTVINGQTSGIGNIGVPGTLFGSVRSGLNTGLFNMGTA Sbjct 541 FFNTPTGPLAVDVSGFFNTASGGTVINGQTSGIGNIGVPGTLFGSVRSGLNTGLFNMGTA 600 Query 541 ISGLFNLRQLLG 552 ISGLFNLRQLLG Sbjct 601 ISGLFNLRQLLG 612 >gi|339633556|ref|YP_004725198.1| PPE family protein [Mycobacterium africanum GM041182] gi|339332912|emb|CCC28639.1| PPE family protein [Mycobacterium africanum GM041182] Length=532 Score = 738 bits (1906), Expect = 0.0, Method: Compositional matrix adjust. Identities = 530/552 (97%), Positives = 531/552 (97%), Gaps = 20/552 (3%) Query 1 MAHFSVLPPEINSLRMYLGAGSAPMLQAAAAWDGLAAELGTAASSFSSVTTGLTGQAWQG 60 MAHFSVLPPEINSLRMYLGAGSAPMLQAAAAWDGLAAELGTAASSFSSVTTGLTGQAWQG Sbjct 1 MAHFSVLPPEINSLRMYLGAGSAPMLQAAAAWDGLAAELGTAASSFSSVTTGLTGQAWQG 60 Query 61 PASAAMAAAAAPYAGFLTTASAQAQLAAGQAKAVASVFEAAKAAIVPPAAVAANREAFLA 120 PASAAMAAAAAPYAGFLTTASAQAQLAAGQAKAVASVFEAAKAAIVPPAAVAANREAFLA Sbjct 61 PASAAMAAAAAPYAGFLTTASAQAQLAAGQAKAVASVFEAAKAAIVPPAAVAANREAFLA 120 Query 121 LIRSNWLGLNAPWIAAVESLYEEYWAADVAAMTGYHAGASQAAAQLPLPAGLQQFLNTLP 180 LIRSNWLGLNAPWIAAVESLYEEYWAADVAAMTGYHAGASQAAAQLPLPAGLQQFLNTLP Sbjct 121 LIRSNWLGLNAPWIAAVESLYEEYWAADVAAMTGYHAGASQAAAQLPLPAGLQQFLNTLP 180 Query 181 NLGIGNQGNANLGGGNTGSGNIGNGNKGSSNLGGGNIGNNNIGSGNRGSDNFGAGNVGTG 240 NLGIGNQGNANLGGGN G+ NNIGSGNRGSDNFGAGNVGTG Sbjct 181 NLGIGNQGNANLGGGNIGN--------------------NNIGSGNRGSDNFGAGNVGTG 220 Query 241 NIGFGNQGPIDVNLLATPGQNNVGLGNIGNNNMGFGNTGDANTGGGNTGNGNIGGGNTGN 300 NIGFGNQGPIDVNLLATPGQNNVGLGNIGNNNMGFGNTGDANTGGGNTGNGNIGGGNTGN Sbjct 221 NIGFGNQGPIDVNLLATPGQNNVGLGNIGNNNMGFGNTGDANTGGGNTGNGNIGGGNTGN 280 Query 301 NNFGFGNTGNNNIGIGLTGNNQMGINLAGLLNSGSGNIGIGNSGTNNIGLFNSGSGNIGV 360 NNFGFGNTGNNNIGIGLTGNNQMGINLAGLLNSGSGNIGIGNSGTNNIGLFNSGSGNIGV Sbjct 281 NNFGFGNTGNNNIGIGLTGNNQMGINLAGLLNSGSGNIGIGNSGTNNIGLFNSGSGNIGV 340 Query 361 FNTGANTLVPGDLNNLGVGNSGNANIGFGNAGVLNTGFGNASILNTGLGNAGELNTGFGN 420 FNTGANTLVPGDLNNLGVGNSGNANIGFGNAGVLNTGFGNASILNTGLGNAGELNTGFGN Sbjct 341 FNTGANTLVPGDLNNLGVGNSGNANIGFGNAGVLNTGFGNASILNTGLGNAGELNTGFGN 400 Query 421 AGFVNTGFDNSGNVNTGNGNSGNINTGSWNAGNVNTGFGIITDSGLTNSGFGNTGTDVSG 480 AGFVNTGFDNSGNVNTGNGNSGNINTGSWNAGNVNTGFGIITDSGLTNSGFGNTGTDVSG Sbjct 401 AGFVNTGFDNSGNVNTGNGNSGNINTGSWNAGNVNTGFGIITDSGLTNSGFGNTGTDVSG 460 Query 481 FFNTPTGPLAVDVSGFFNTASGGTVINGQTSGIGNIGVPGTLFGSVRSGLNTGLFNMGTA 540 FFNTPTGPLAVDVSGFFNTASGGTVINGQTSGIGNIGVPGTLFGSVRSGLNTGLFNMGTA Sbjct 461 FFNTPTGPLAVDVSGFFNTASGGTVINGQTSGIGNIGVPGTLFGSVRSGLNTGLFNMGTA 520 Query 541 ISGLFNLRQLLG 552 ISGLFNLRQLLG Sbjct 521 ISGLFNLRQLLG 532 >gi|289440987|ref|ZP_06430731.1| PPE family protein [Mycobacterium tuberculosis T46] gi|289413906|gb|EFD11146.1| PPE family protein [Mycobacterium tuberculosis T46] Length=411 Score = 527 bits (1357), Expect = 2e-147, Method: Compositional matrix adjust. Identities = 380/381 (99%), Positives = 380/381 (99%), Gaps = 0/381 (0%) Query 1 MAHFSVLPPEINSLRMYLGAGSAPMLQAAAAWDGLAAELGTAASSFSSVTTGLTGQAWQG 60 MAHFSVLPPEINSLRMYLGAGSAPMLQAAAAWDGLAAELGTAASSFSSVTTGLTGQAWQG Sbjct 1 MAHFSVLPPEINSLRMYLGAGSAPMLQAAAAWDGLAAELGTAASSFSSVTTGLTGQAWQG 60 Query 61 PASAAMAAAAAPYAGFLTTASAQAQLAAGQAKAVASVFEAAKAAIVPPAAVAANREAFLA 120 PASAAMAAAAAPYAGFLTTASAQAQLAAGQAKAVASVFEAAKAAIVPPAAVAANREAFLA Sbjct 61 PASAAMAAAAAPYAGFLTTASAQAQLAAGQAKAVASVFEAAKAAIVPPAAVAANREAFLA 120 Query 121 LIRSNWLGLNAPWIAAVESLYEEYWAADVAAMTGYHAGASQAAAQLPLPAGLQQFLNTLP 180 LIRSNWLGLNAPWIAAVESLYEEYWAADVAAMTGYHAGASQAAAQLPLPAGLQQFLNTLP Sbjct 121 LIRSNWLGLNAPWIAAVESLYEEYWAADVAAMTGYHAGASQAAAQLPLPAGLQQFLNTLP 180 Query 181 NLGIGNQGNANLGGGNTGSGNIGNGNKGSSNLGGGNIGNNNIGSGNRGSDNFGAGNVGTG 240 NLGIGNQGNANLGGGNTGSGNIGNGNKGSSNLGGGNIGNNNIGSGNRGSDNFGAGNVGTG Sbjct 181 NLGIGNQGNANLGGGNTGSGNIGNGNKGSSNLGGGNIGNNNIGSGNRGSDNFGAGNVGTG 240 Query 241 NIGFGNQGPIDVNLLATPGQNNVGLGNIGNNNMGFGNTGDANTGGGNTGNGNIGGGNTGN 300 NIGFGNQGPIDVNLLATPGQNNVGLGNIGNNNMGFGNTGDANTGGGNTGNGNIGGGNTGN Sbjct 241 NIGFGNQGPIDVNLLATPGQNNVGLGNIGNNNMGFGNTGDANTGGGNTGNGNIGGGNTGN 300 Query 301 NNFGFGNTGNNNIGIGLTGNNQMGINLAGLLNSGSGNIGIGNSGTNNIGLFNSGSGNIGV 360 NNFGF NTGNNNIGIGLTGNNQMGINLAGLLNSGSGNIGIGNSGTNNIGLFNSGSGNIGV Sbjct 301 NNFGFSNTGNNNIGIGLTGNNQMGINLAGLLNSGSGNIGIGNSGTNNIGLFNSGSGNIGV 360 Query 361 FNTGANTLVPGDLNNLGVGNS 381 FNTGANTLVPGDLNNLGVGNS Sbjct 361 FNTGANTLVPGDLNNLGVGNS 381 Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 87/220 (40%), Positives = 108/220 (50%), Gaps = 40/220 (18%) Query 272 NMGFGNTGDANTGGGNTGNGNIGGGNTGNNNFGFGNTGNNNIGIGLTGNNQMGINLAGLL 331 N+G GN G+AN GGGNTG+GNIG GN G G +G N G Sbjct 181 NLGIGNQGNANLGGGNTGSGNIGNGNK---------------GSSNLGGGNIGNNNIGSG 225 Query 332 NSGSGNIGIGNSGTNNIGLFNSGSGNIGVFNTGANTLVPGDLNNLGVGNSGNANIGFGNA 391 N GS N G GN GT NIG N G ++ + T PG NN+G+GN GN N+GFGN Sbjct 226 NRGSDNFGAGNVGTGNIGFGNQGPIDVNLLAT------PGQ-NNVGLGNIGNNNMGFGNT 278 Query 392 GVLNTGFGNASILNTGLGNAGELNTGFGNAGFVNTGFDNSGNVNTGNGNSGNINTGSWNA 451 G +A+ GN GN F GF N+GN N G G +GN G A Sbjct 279 G-------DANTGGGNTGNGNIGGGNTGNNNF---GFSNTGNNNIGIGLTGNNQMGINLA 328 Query 452 GNVNTGFGIITDSGLTNSGFGNTGTDVSGFFNTPTGPLAV 491 G +N+G G N G GN+GT+ G FN+ +G + V Sbjct 329 GLLNSGSG--------NIGIGNSGTNNIGLFNSGSGNIGV 360 >gi|183985015|ref|YP_001853306.1| PPE family protein [Mycobacterium marinum M] gi|183178341|gb|ACC43451.1| PPE family protein [Mycobacterium marinum M] Length=537 Score = 497 bits (1280), Expect = 2e-138, Method: Compositional matrix adjust. Identities = 340/554 (62%), Positives = 402/554 (73%), Gaps = 25/554 (4%) Query 1 MAHFSVLPPEINSLRMYLGAGSAPMLQAAAAWDGLAAELGTAASSFSSVTTGLTGQAWQG 60 M F +LPPEINSLRM+ GAGS PMLQA+AAW+GLA ELG AA SFS+VT+GL GQAWQG Sbjct 1 MVSFPMLPPEINSLRMFNGAGSTPMLQASAAWNGLAEELGAAADSFSAVTSGLAGQAWQG 60 Query 61 PASAAMAAAAAPYAGFLTTASAQAQLAAGQAKAVASVFEAAKAAIVPPAAVAANREAFLA 120 ASAAM AAA+PYAG+L+ A+A+A AAGQA+AVAS FEAA+ A++ P AVAANR F+ Sbjct 61 AASAAMTAAASPYAGWLSAAAARAAGAAGQAQAVASAFEAARMAMIHPLAVAANRNVFVQ 120 Query 121 LIRSNWLGLNAPWIAAVESLYEEYWAADVAAMTGYHAGASQAAAQL-PLPAGLQQFLNTL 179 L+RSN+ G NAP I A ES YEE WAADVAAMTGYH+G S AAA L P QQ L L Sbjct 121 LVRSNFFGFNAPAIMAAESQYEEMWAADVAAMTGYHSGVSAAAASLNP----FQQLLQAL 176 Query 180 PNLGIGNQ-GNANLGGGNTGSGNIGNGNKGSSNLGGGNIGNNNIGSGNRGSDNFGAGNVG 238 PN+G+GN+ G N+G GNTGS NIGNGN GSSN GGGN+G+NNIG GN GS N+G+GN+G Sbjct 177 PNIGLGNKGGTGNIGSGNTGSTNIGNGNTGSSNFGGGNVGSNNIGDGNLGSGNWGSGNLG 236 Query 239 TGNIGFGNQG-PIDVNLLATPGQNNVGLGNIGNNNMGFGNTGDANTGGGNTGNGNIGGGN 297 NIGFGN G P+ + PG N GLGN GN N G GN GD N G GN+G+GN+G G Sbjct 237 NENIGFGNTGNPLTS---SNPGI-NFGLGNWGNGNFGIGNRGDLNVGAGNSGDGNLGFGL 292 Query 298 TGNNNFGFGNTGNNNIGIGLTGNNQMGINLAGLLNSGSGNIGIGNSGTNNIGLFNSGSGN 357 TG+N GFGN ++ T N LNSG+GN GIGNSGTNNIG FNSG+GN Sbjct 293 TGDNLVGFGNAYYDSTTGQFTFNG---------LNSGTGNFGIGNSGTNNIGFFNSGNGN 343 Query 358 IGVFNTGANTLVPGDLNNLGVGNSGNANIGFGNAGVLNTGFGNASILNTGLGNAGELNTG 417 GVFN G ++ N GVGNSG N+GFGN+ + N G GN+ +LNTG N+ NTG Sbjct 344 FGVFNAGLSSTSA--FGNFGVGNSGTGNVGFGNSDIGNFGVGNSGVLNTGFFNSASGNTG 401 Query 418 FGNAGFVNTGFDNSGNVNTGNGNSGNINTGSWNAGNVNTGFGIITDSGLTNSGFGNTGTD 477 FGNAG NTGF NSG+VNTG+GNSG+ NTG WN+G+VNT G D+G TNSGF NTG++ Sbjct 402 FGNAGSTNTGFLNSGDVNTGSGNSGHTNTGLWNSGDVNTDIGSTADTGDTNSGFNNTGSN 461 Query 478 VSGFFNTPTGPLAVDVSGFFNTASGGTVINGQTSGIGNIGVPGTLFGSVRSGLNTGLFNM 537 VSGFFNT TG A D+SG FN ASGGTV NG SGIGN GV +L G +G TGLFN Sbjct 462 VSGFFNTATGTFAGDISGMFNQASGGTV-NGIISGIGNTGVADSLPG--IAGNLTGLFNT 518 Query 538 GTAISGLFNLRQLL 551 G+ +SG+F+L +LL Sbjct 519 GSNMSGVFSLEELL 532 >gi|240169772|ref|ZP_04748431.1| PPE family protein [Mycobacterium kansasii ATCC 12478] Length=550 Score = 496 bits (1276), Expect = 6e-138, Method: Compositional matrix adjust. Identities = 380/553 (69%), Positives = 436/553 (79%), Gaps = 6/553 (1%) Query 1 MAHFSVLPPEINSLRMYLGAGSAPMLQAAAAWDGLAAELGTAASSFSSVTTGLTGQAWQG 60 M +F+VLPPEINSLRM+ GAGSAPML AAAAWDGLA EL +AA SF+SVT GL QAWQG Sbjct 1 MTNFTVLPPEINSLRMFGGAGSAPMLSAAAAWDGLAGELESAAESFASVTAGLAEQAWQG 60 Query 61 PASAAMAAAAAPYAGFLTTASAQAQLAAGQAKAVASVFEAAKAAIVPPAAVAANREAFLA 120 PA+AAM AAAAPYAGFL+ ASAQA AAGQA+AV + FE A AA++ P AVAANR F+ Sbjct 61 PAAAAMTAAAAPYAGFLSAASAQAAAAAGQAQAVVAAFETAHAAMIHPVAVAANRNVFVQ 120 Query 121 LIRSNWLGLNAPWIAAVESLYEEYWAADVAAMTGYHAGASQAAAQL-PLPAGLQQFLNTL 179 L+ SN LG NAP IAA ES+YE+ WA DVAAM GYH+GAS AAA L PLPA LQQFL L Sbjct 121 LVMSNLLGQNAPAIAATESVYEQMWAQDVAAMFGYHSGASSAAASLIPLPASLQQFLAGL 180 Query 180 PNLGIGNQGNANLGGGNTGSGNIGNGNKGSSNLGGGNIGNNNIGSGNRGSDNFGAGNVGT 239 P++G+GN+GNANLG GNTG N+G+GN G N+GGGN GN+N GSGN G+ NFGAGN Sbjct 181 PSVGLGNKGNANLGSGNTGGQNLGSGNSGFGNIGGGNRGNDNTGSGNIGNGNFGAGNRYN 240 Query 240 GNIGFGNQGPIDVNLLATPGQNNVGLGNIGNNNMGFGNTGDANTGGGNTGNGNIGGGNTG 299 GNIGFGN G + PG N VG+GN+GN N GFGN GD N GGGN G+ NIGGGNTG Sbjct 241 GNIGFGNIG--NPATSPNPGHN-VGMGNVGNTNWGFGNNGDGNIGGGNAGSNNIGGGNTG 297 Query 300 NNNFGFGNTGNNNIGIGLTGNNQMGINLAGLLNSGSGNIGIGNSGTNNIGLFNSGSGNIG 359 + NFGFGN+G+NNIGIGLTGNNQ+GINL GLLNSGSGN+GIGNSGTNNIG FNSG+GNIG Sbjct 298 SGNFGFGNSGSNNIGIGLTGNNQVGINLPGLLNSGSGNVGIGNSGTNNIGFFNSGNGNIG 357 Query 360 VFNTGANTLVPGDLNNLGVGNSGNANIGFGNAGVLNTGFGNASILNTGLGNAGELNTGFG 419 FNTG+NT PG LN+ G GNSG+ N+G GN+G NTGFGN LNTG GN G NTGF Sbjct 358 AFNTGSNTTNPGHLNSFGFGNSGSGNLGIGNSGAGNTGFGNNGQLNTGFGNGGSANTGFS 417 Query 420 NAGFVNTGFDNSGNVNTGNGNSGNINTGSWNAGNVNTGFGIITDSGLTNSGFGNTGTDVS 479 N+G +NTGF +SG+ NTG+GNSG+ NTGS N+GNVNTGFG TD+GLTNSGF NTGT S Sbjct 418 NSGDLNTGFWDSGSFNTGSGNSGSFNTGSGNSGNVNTGFGSTTDTGLTNSGFNNTGTLSS 477 Query 480 GFFNTPT-GPLAVDVSGFFNTASGGTVINGQTSGIGNIGVPGTLFGSVRSGLNTGLFNMG 538 GFFNT T G +SGFFNTASGGT +G TSGIGN G+PG L G SG N+G FN+G Sbjct 478 GFFNTATGGGTPGRMSGFFNTASGGTGQSGVTSGIGNTGIPGVL-GPTISGRNSGFFNVG 536 Query 539 TAISGLFNLRQLL 551 TA+SG+FNL +LL Sbjct 537 TAVSGIFNLSRLL 549 >gi|240172883|ref|ZP_04751542.1| PPE family protein [Mycobacterium kansasii ATCC 12478] Length=571 Score = 440 bits (1132), Expect = 3e-121, Method: Compositional matrix adjust. Identities = 312/574 (55%), Positives = 375/574 (66%), Gaps = 45/574 (7%) Query 16 MYLGAGSAPMLQAAAAWDGLAAELGTAASSFSSVTTGLTGQAWQGPASAAMAAAAAPYAG 75 MYLGAGSAP+L+ +AAW GLA ELGTAA SFSSVT+ L GQAWQGPAS AMA AA PYA Sbjct 1 MYLGAGSAPLLEVSAAWSGLADELGTAADSFSSVTSNLAGQAWQGPASQAMARAARPYAE 60 Query 76 FLTTASAQAQLAAGQAKAVASVFEAAKAAIVPPAAVAANREAFLALIRSNWLGLNAPWIA 135 FL AS +A + A+ VAS+FEAAKAA V P +AANR+AF+ +R+N G NAP+IA Sbjct 61 FLRAASLRATTTSSGARTVASIFEAAKAATVHPEIIAANRQAFVQAVRTNIFGFNAPFIA 120 Query 136 AVESLYEEYWAADVAAMTGYHAGASQAAAQLPLPAGLQQFLNTLPNLG------------ 183 A E+ YEE+WA DVAA+ GYH GAS AAQL + QQ + LP +G Sbjct 121 AAEAAYEEFWATDVAALVGYHGGASAVAAQL---SSWQQTMQHLPGIGQLLGGAPAGAAT 177 Query 184 ------------IGNQGNANLGGGNTGSGNIGNGNKGSSNLGGGNIGNNNIGSGNRGSDN 231 G + TG+GN+GNGNKGS N G GN GN NIG GNR Sbjct 178 AAPTDPNIGVGNKGGGNIGSGNNSGTGAGNVGNGNKGSGNFGSGNRGNGNIGFGNRSPRT 237 Query 232 FGAGNVGTGNIGFGNQGPIDVNLLATPGQNNVG------LGNIGNNNMGFGNTGDANTGG 285 G GNIG GN G + N + + N+N G GN+G N GG Sbjct 238 TGV----RGNIGLGNFGAGNFGAGNFGNNNVGFGNGAGPVPGLANSNFGLGNSGSFNQGG 293 Query 286 GNTGNGNIGGGNTGNNNFGFGNTGNNNIGIGLTGNNQMGINLAGLLNSGSGNIGIGNSGT 345 GNTG GNIG GNTG NN GFGNTGNNN+GIGLTGNNQ GINLAGLLNSG+GNIG+ NSGT Sbjct 294 GNTGIGNIGAGNTGTNNIGFGNTGNNNLGIGLTGNNQAGINLAGLLNSGNGNIGLFNSGT 353 Query 346 NNIGLFNSGSGNIGVFNTGANTLVP--GDLNNLGVGNSGNANIGFGNAGVLNTGFGNASI 403 NNIG FNSG GN+G+FN+G N GD+ ++G+GNSG ++G GN+G + GFGN+ Sbjct 354 NNIGFFNSGDGNVGIFNSGRNLTAATLGDIQSIGIGNSGFGHLGAGNSGRASFGFGNSGF 413 Query 404 LNTGLGNAGELNTGFGNAGFVNTGFDNSGNVNTGNGNSGNINTGSWNAGNVNTGFGIITD 463 L+TG+GN+G +TGFGN+G VNTGF NSG NTG GNSG++NTG+WN+GN NT G TD Sbjct 414 LDTGIGNSGAYSTGFGNSGVVNTGFGNSGQFNTGFGNSGSVNTGAWNSGNFNTTVGSTTD 473 Query 464 SGLTNSGFGNTGTDVSGFFNTPT-GPLAVDVSGFFNTASGGTVINGQTSGIGNIGV---- 518 T SGFGNTGT+VSGF N+ + G + ++SGFFN ASGG+ NG SG+ N GV Sbjct 474 VSATTSGFGNTGTNVSGFNNSASGGGVNGNISGFFNRASGGSAQNGNLSGLFNTGVSVAY 533 Query 519 -PGTLFGSVRSGLNTGLFNMGTAISGLFNLRQLL 551 P V SG +G+ N GT GLFN+ QLL Sbjct 534 LPFFPVPGVVSGFGSGVLNTGTGFIGLFNIAQLL 567 >gi|240168775|ref|ZP_04747434.1| PPE family protein [Mycobacterium kansasii ATCC 12478] Length=539 Score = 440 bits (1132), Expect = 3e-121, Method: Compositional matrix adjust. Identities = 333/549 (61%), Positives = 391/549 (72%), Gaps = 14/549 (2%) Query 4 FSVLPPEINSLRMYLGAGSAPMLQAAAAWDGLAAELGTAASSFSSVTTGLTGQAWQGPAS 63 F VLPPE+NS M+ GAGS P+L AAAAW+GLA++LGTAASSFSSVT+GL GQAWQGPAS Sbjct 3 FLVLPPELNSALMFSGAGSGPLLDAAAAWEGLASDLGTAASSFSSVTSGLAGQAWQGPAS 62 Query 64 AAMAAAAAPYAGFLTTASAQAQLAAGQAKAVASVFEAAKAAIVPPAAVAANREAFLALIR 123 AMAAAAAPY+G+L A+ QA AAGQA+AV S FEAA+AA V P VA NR + + ++ Sbjct 63 QAMAAAAAPYSGWLNAAAVQAAGAAGQARAVVSAFEAAQAATVQPVMVALNRNSLVQMVL 122 Query 124 SNWLGLNAPWIAAVESLYEEYWAADVAAMTGYHAGASQAAAQLPLPAGLQQFLNTLPNLG 183 SNW GLNAP IA +E+ YE WA DV+AM+GY++GAS AAA+L LQ L LPNLG Sbjct 123 SNWFGLNAPAIAQLEADYEAMWAQDVSAMSGYYSGASAAAARLLPAQSLQDLLAALPNLG 182 Query 184 IGNQGNANLGGGNTGSGNIGNGNKGSSNLGGGNIGNNNIGSGNRGSDNFGAGNVGTGNIG 243 IGN G+ANLG GN GS N GNGN G+ NLG GN G+ NIGSGN G+ NFG+GN+G NIG Sbjct 183 IGNIGSANLGNGNNGSVNAGNGNTGNQNLGSGNKGSFNIGSGNSGNANFGSGNIGNDNIG 242 Query 244 FGNQGPIDVNLLATPGQNNVGLGNIGNNNMGFGNTGDANTGGGNTGNGNIGGGNTGNNNF 303 FGN G D + + PG N G+GN GN N G GN+G+ N GGGNTGNGN+G G +G+N Sbjct 243 FGNTG--DPSTSSNPGA-NFGIGNTGNGNFGVGNSGNLNVGGGNTGNGNLGFGLSGSNLI 299 Query 304 GFGNTGNNNIGIGLTGNNQMGINLAGLLNSGSGNIGIGNSGTNNIGLFNSGSGNIGVFNT 363 GFGN N+ TG AG LNSG GN GIGNSGTNNIG FNSG N+G+FN+ Sbjct 300 GFGNAYYNSA----TGQ----FTFAG-LNSGVGNFGIGNSGTNNIGFFNSGHHNVGIFNS 350 Query 364 GANTLVPGDLNNLGVGNSGNANIGFGNAGVLNTGFGNASILNTGLGNAGELNTGFGNAGF 423 G N N+G GNSG N GFGN+G NTG GNA I++TG GN+G +TGFGN G Sbjct 351 GTNPYSANAFTNIGFGNSGFFNFGFGNSGTGNTGVGNAGIVDTGFGNSGVQDTGFGNGGS 410 Query 424 VNTGFDNSGNVNTGNGNSGNINTGSWNAGNVNTGFGIITDSGLTNSGFGNTGTDVSGFFN 483 NTGF NSG+ NTG GNSGN NTG WN+GNVNTG G TD+GLTNSGF N G +SGFFN Sbjct 411 FNTGFWNSGDTNTGIGNSGNTNTGFWNSGNVNTGLGATTDTGLTNSGFSNIGVGMSGFFN 470 Query 484 TPTGPLA-VDVSGFFNTASGGTVINGQTSGIGNIGVPGTLFGSVRSGLNTGLFNMGTAIS 542 T G ++SG FNTA+ G + NG +SG GN GVPG +FG SG N+GLFN GT S Sbjct 471 TAAGGTTNHNISGVFNTAT-GAITNGNSSGFGNTGVPGIIFGPALSGGNSGLFNNGTFKS 529 Query 543 GLFNLRQLL 551 G FNL L Sbjct 530 GFFNLTGLF 538 >gi|307086350|ref|ZP_07495463.1| hypothetical protein TMLG_00048 [Mycobacterium tuberculosis SUMu012] gi|308364207|gb|EFP53058.1| hypothetical protein TMLG_00048 [Mycobacterium tuberculosis SUMu012] Length=247 Score = 431 bits (1108), Expect = 2e-118, Method: Compositional matrix adjust. Identities = 247/247 (100%), Positives = 247/247 (100%), Gaps = 0/247 (0%) Query 306 GNTGNNNIGIGLTGNNQMGINLAGLLNSGSGNIGIGNSGTNNIGLFNSGSGNIGVFNTGA 365 GNTGNNNIGIGLTGNNQMGINLAGLLNSGSGNIGIGNSGTNNIGLFNSGSGNIGVFNTGA Sbjct 1 GNTGNNNIGIGLTGNNQMGINLAGLLNSGSGNIGIGNSGTNNIGLFNSGSGNIGVFNTGA 60 Query 366 NTLVPGDLNNLGVGNSGNANIGFGNAGVLNTGFGNASILNTGLGNAGELNTGFGNAGFVN 425 NTLVPGDLNNLGVGNSGNANIGFGNAGVLNTGFGNASILNTGLGNAGELNTGFGNAGFVN Sbjct 61 NTLVPGDLNNLGVGNSGNANIGFGNAGVLNTGFGNASILNTGLGNAGELNTGFGNAGFVN 120 Query 426 TGFDNSGNVNTGNGNSGNINTGSWNAGNVNTGFGIITDSGLTNSGFGNTGTDVSGFFNTP 485 TGFDNSGNVNTGNGNSGNINTGSWNAGNVNTGFGIITDSGLTNSGFGNTGTDVSGFFNTP Sbjct 121 TGFDNSGNVNTGNGNSGNINTGSWNAGNVNTGFGIITDSGLTNSGFGNTGTDVSGFFNTP 180 Query 486 TGPLAVDVSGFFNTASGGTVINGQTSGIGNIGVPGTLFGSVRSGLNTGLFNMGTAISGLF 545 TGPLAVDVSGFFNTASGGTVINGQTSGIGNIGVPGTLFGSVRSGLNTGLFNMGTAISGLF Sbjct 181 TGPLAVDVSGFFNTASGGTVINGQTSGIGNIGVPGTLFGSVRSGLNTGLFNMGTAISGLF 240 Query 546 NLRQLLG 552 NLRQLLG Sbjct 241 NLRQLLG 247 Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 106/253 (42%), Positives = 131/253 (52%), Gaps = 45/253 (17%) Query 181 NLGIGNQGNANLGGG-----NTGSGNIGNGNKGSSNLGGGNIGNNNIGSGNRGS------ 229 N+GIG GN +G N+GSGNIG GN G++N+G N G+ NIG N G+ Sbjct 7 NIGIGLTGNNQMGINLAGLLNSGSGNIGIGNSGTNNIGLFNSGSGNIGVFNTGANTLVPG 66 Query 230 --DNFGAGNVGTGNIGFGNQGPIDVNLLATPGQNNVGLGNIGNNNMGFGNTGDANTGGGN 287 +N G GN G NIGFGN G ++ N GLGN G N GFGN G NTG N Sbjct 67 DLNNLGVGNSGNANIGFGNAGVLNTG-FGNASILNTGLGNAGELNTGFGNAGFVNTGFDN 125 Query 288 TGNGNIGGGNTGNNNFGFGNTGNNNIGIGLTGNNQMGINLAGLLNSGSGNIGIGNSGTNN 347 +GN N G GN+GN N G N GN N G G+ I +GL NS G GN+GT+ Sbjct 126 SGNVNTGNGNSGNINTGSWNAGNVNTGFGI-------ITDSGLTNS-----GFGNTGTDV 173 Query 348 IGLFNSGSGNI-----GVFNTGA-NTLVPGDLNNLGVGNSGNANIGFGNAGVLNTGFGNA 401 G FN+ +G + G FNT + T++ G + G GN GV T FG+ Sbjct 174 SGFFNTPTGPLAVDVSGFFNTASGGTVINGQTS------------GIGNIGVPGTLFGSV 221 Query 402 -SILNTGLGNAGE 413 S LNTGL N G Sbjct 222 RSGLNTGLFNMGT 234 Score = 43.5 bits (101), Expect = 0.10, Method: Compositional matrix adjust. Identities = 76/205 (38%), Positives = 92/205 (45%), Gaps = 52/205 (25%) Query 179 LPNLGIGNQGNANLGGGNTGSGNIGNGNKGSSNLGGGNIGNNNIGSGNRGSDNFGAGNVG 238 L NLG+GN GNAN+G GN G N G GN N G GN G Sbjct 68 LNNLGVGNSGNANIGFGNAGVLNTGFGNASILNT--------------------GLGNAG 107 Query 239 TGNIGFGNQGPIDVNLLATPGQNNVGLGNIGNNNMGFGNTGDANTGGGNTGNGNIGGG-- 296 N GFGN G + N G N GN N G GN+G+ NTG N GN N G G Sbjct 108 ELNTGFGNAGFV-----------NTGFDNSGNVNTGNGNSGNINTGSWNAGNVNTGFGII 156 Query 297 -NTGNNNFGFGNTGNNNIGIGLTGNNQMGINLAGLLNSGSGNI-------GIGNSGTN-- 346 ++G N GFGNTG + G T + ++++G N+ SG GIGN G Sbjct 157 TDSGLTNSGFGNTGTDVSGFFNTPTGPLAVDVSGFFNTASGGTVINGQTSGIGNIGVPGT 216 Query 347 ---------NIGLFNSGSGNIGVFN 362 N GLFN G+ G+FN Sbjct 217 LFGSVRSGLNTGLFNMGTAISGLFN 241 >gi|308406192|ref|ZP_07495462.2| putative PPE family protein [Mycobacterium tuberculosis SUMu012] gi|308364234|gb|EFP53085.1| putative PPE family protein [Mycobacterium tuberculosis SUMu012] Length=376 Score = 400 bits (1029), Expect = 2e-109, Method: Compositional matrix adjust. Identities = 281/281 (100%), Positives = 281/281 (100%), Gaps = 0/281 (0%) Query 1 MAHFSVLPPEINSLRMYLGAGSAPMLQAAAAWDGLAAELGTAASSFSSVTTGLTGQAWQG 60 MAHFSVLPPEINSLRMYLGAGSAPMLQAAAAWDGLAAELGTAASSFSSVTTGLTGQAWQG Sbjct 81 MAHFSVLPPEINSLRMYLGAGSAPMLQAAAAWDGLAAELGTAASSFSSVTTGLTGQAWQG 140 Query 61 PASAAMAAAAAPYAGFLTTASAQAQLAAGQAKAVASVFEAAKAAIVPPAAVAANREAFLA 120 PASAAMAAAAAPYAGFLTTASAQAQLAAGQAKAVASVFEAAKAAIVPPAAVAANREAFLA Sbjct 141 PASAAMAAAAAPYAGFLTTASAQAQLAAGQAKAVASVFEAAKAAIVPPAAVAANREAFLA 200 Query 121 LIRSNWLGLNAPWIAAVESLYEEYWAADVAAMTGYHAGASQAAAQLPLPAGLQQFLNTLP 180 LIRSNWLGLNAPWIAAVESLYEEYWAADVAAMTGYHAGASQAAAQLPLPAGLQQFLNTLP Sbjct 201 LIRSNWLGLNAPWIAAVESLYEEYWAADVAAMTGYHAGASQAAAQLPLPAGLQQFLNTLP 260 Query 181 NLGIGNQGNANLGGGNTGSGNIGNGNKGSSNLGGGNIGNNNIGSGNRGSDNFGAGNVGTG 240 NLGIGNQGNANLGGGNTGSGNIGNGNKGSSNLGGGNIGNNNIGSGNRGSDNFGAGNVGTG Sbjct 261 NLGIGNQGNANLGGGNTGSGNIGNGNKGSSNLGGGNIGNNNIGSGNRGSDNFGAGNVGTG 320 Query 241 NIGFGNQGPIDVNLLATPGQNNVGLGNIGNNNMGFGNTGDA 281 NIGFGNQGPIDVNLLATPGQNNVGLGNIGNNNMGFGNTGDA Sbjct 321 NIGFGNQGPIDVNLLATPGQNNVGLGNIGNNNMGFGNTGDA 361 Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 45/104 (44%), Positives = 56/104 (54%), Gaps = 24/104 (23%) Query 272 NMGFGNTGDANTGGGNTGNGNIGGGNT--------------------GNNNFGFGNTGNN 311 N+G GN G+AN GGGNTG+GNIG GN G++NFG GN G Sbjct 261 NLGIGNQGNANLGGGNTGSGNIGNGNKGSSNLGGGNIGNNNIGSGNRGSDNFGAGNVGTG 320 Query 312 NIGIGLTGNNQMGINLAGLLNSGSGNIGIGNSGTNNIGLFNSGS 355 NIG G NQ I++ L G N+G+GN G NN+G N+G Sbjct 321 NIGFG----NQGPIDVNLLATPGQNNVGLGNIGNNNMGFGNTGD 360 Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust. Identities = 43/99 (44%), Positives = 53/99 (54%), Gaps = 13/99 (13%) Query 337 NIGIGNSGTNNIGLFNSGSGNIGVFNTGANTLVPGDL------------NNLGVGNSGNA 384 N+GIGN G N+G N+GSGNIG N G++ L G++ +N G GN G Sbjct 261 NLGIGNQGNANLGGGNTGSGNIGNGNKGSSNLGGGNIGNNNIGSGNRGSDNFGAGNVGTG 320 Query 385 NIGFGNAGVLNTG-FGNASILNTGLGNAGELNTGFGNAG 422 NIGFGN G ++ N GLGN G N GFGN G Sbjct 321 NIGFGNQGPIDVNLLATPGQNNVGLGNIGNNNMGFGNTG 359 >gi|183981484|ref|YP_001849775.1| PPE family protein [Mycobacterium marinum M] gi|183174810|gb|ACC39920.1| PPE family protein [Mycobacterium marinum M] Length=627 Score = 395 bits (1015), Expect = 1e-107, Method: Compositional matrix adjust. Identities = 312/598 (53%), Positives = 369/598 (62%), Gaps = 83/598 (13%) Query 1 MAHFSVLPPEINSLRMYLGAGSAPMLQAAAAWDGLAAELGTAASSFSSVTTGLTGQAWQG 60 M F +LPPEINS+RM+ GAG+APML AA AW GLA ELGTAA SF SVT+GL GQ WQG Sbjct 1 MMSFLLLPPEINSVRMFAGAGAAPMLDAAVAWGGLAEELGTAARSFESVTSGLAGQVWQG 60 Query 61 PASAAMAAAAAPYAGFLTTASAQAQLAAGQAKAVASVFEAAKAAIVPPAAVAANREAFLA 120 A+AAMAAAAAPY G+L+ A+A+A A+ QA+AVA VFEAA++A+V P AVAANR F+ Sbjct 61 AAAAAMAAAAAPYTGWLSAAAARAVGASAQARAVAEVFEAARSAMVHPVAVAANRNVFVQ 120 Query 121 LIRSNWLGLNAPWIAAVESLYEEYWAADVAAMTGYHAGASQAAAQLP-LPAGLQQFLNTL 179 L+ SN G NAP IAA E YE+ WAADVAAM GYH GAS AAA LP AGLQQ+++ L Sbjct 121 LVMSNLFGQNAPAIAATEGAYEQMWAADVAAMVGYHGGASAAAAALPSWEAGLQQWISGL 180 Query 180 P---------------NLGIGNQGNANLGGGNTGSGNIGNGNKGSSNLGGGNIGNNNIGS 224 P NLG+GN G+ NLG GNTG N+G+GN G+ NLG GN G +N+GS Sbjct 181 PGVGQLQAAASAIPAFNLGLGNIGDFNLGNGNTGDNNLGSGNIGNLNLGSGNTGGSNVGS 240 Query 225 GNRGSDNFGAGNVGTGNIGFGNQGPIDVNLLATPGQN-NVGLGNIGNNNMGFGNTGDANT 283 GN G N G+GN G N+G GN +L++ G + NVG GN+G++N G GNTG +N Sbjct 241 GNYGDGNLGSGNYGNSNLGSGN------GVLSSVGSDSNVGSGNLGSHNFGNGNTGSSNI 294 Query 284 GGGNTGNGNIGGGNTGNNNF----------GFGNTGNNNIGIGLTGNNQMGINLAGLLNS 333 G GN G+ N G N G+NNF GF NTGNNNIG GLTG+NQMGI G LN+ Sbjct 295 GSGNIGDTNRGFANLGSNNFGFANLGDGNVGFANTGNNNIGFGLTGDNQMGI---GALNT 351 Query 334 GSGNIGIGNSGTNNIGLFNSGSGNIGVFNTGANTLVPGDLNNLGVGNSGNANIGFGNAGV 393 G N G GNSG+NNIG FNSG N+G FN+G N G NSG+ N GF N+G Sbjct 352 GLANTGFGNSGSNNIGFFNSGDHNVGFFNSGN--------GNYGFLNSGDTNTGFENSGS 403 Query 394 LNTGFGNASILNTGLGNA--------------------GELNTGFGNAGFVNTGFDNSGN 433 +NTG NA N G NA G NTG NAG VNTG NSG+ Sbjct 404 VNTGVQNAGAANFGAWNAGGGNFGFGNGGGGNFGFGNSGLSNTGSFNAGDVNTGDFNSGS 463 Query 434 VNTGNGNSGNINTGSWNAGNVNTGFGIITDSGLTNSGFGNTGTDVSGFFNTPTGPLAVDV 493 NTG GNSG+INTG +N+GN+NT NSGFGNTGT +SGF N+ VD Sbjct 464 TNTGWGNSGDINTGLFNSGNLNTSIASSATQAGPNSGFGNTGTGLSGFNNS-----GVDT 518 Query 494 SGFFNTASGGTV------------INGQTSGIGNIGVPGTL-FGSVRSGLNTGLFNMG 538 SG N T N TSG N+G PGT G+ GLN GLFN G Sbjct 519 SGIQNAQYETTKTLPPPAPPIPIHFNQGTSGFFNMG-PGTAGIGNSGGGLNRGLFNNG 575 Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 89/269 (34%), Positives = 115/269 (43%), Gaps = 81/269 (30%) Query 181 NLGIGNQGNANLGGG------------NTGSGNIGNGNKGSSNLGGGNIGNNNIGSGNRG 228 N+G N GN N+G G NTG N G GN GS+N+G N G++N+G N G Sbjct 323 NVGFANTGNNNIGFGLTGDNQMGIGALNTGLANTGFGNSGSNNIGFFNSGDHNVGFFNSG 382 Query 229 SDNFGAGNVGTGNIGFGNQGPIDVNLLATPGQNNVGLGNI-------------------- 268 + N+G N G N GF N G ++ + G N G N Sbjct 383 NGNYGFLNSGDTNTGFENSGSVNTGV-QNAGAANFGAWNAGGGNFGFGNGGGGNFGFGNS 441 Query 269 GNNNMGFGNTGDANTGGGNTGNGNIGGGNTGNNNFGFGNTGN------------------ 310 G +N G N GD NTG N+G+ N G GN+G+ N G N+GN Sbjct 442 GLSNTGSFNAGDVNTGDFNSGSTNTGWGNSGDINTGLFNSGNLNTSIASSATQAGPNSGF 501 Query 311 NNIGIGLTGNNQMGINLAGL-----------------------------LNSGSGNIGIG 341 N G GL+G N G++ +G+ N G G GIG Sbjct 502 GNTGTGLSGFNNSGVDTSGIQNAQYETTKTLPPPAPPIPIHFNQGTSGFFNMGPGTAGIG 561 Query 342 NSGTN-NIGLFNSGSGNIGVFNTGANTLV 369 NSG N GLFN+G NIG+ N+G N V Sbjct 562 NSGGGLNRGLFNNGFLNIGIANSGDNGFV 590 Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust. Identities = 84/197 (43%), Positives = 97/197 (50%), Gaps = 28/197 (14%) Query 348 IGLFNSGSGNIGVFNTG-ANTLVPGDLNNLGVGNSGNANIGFGNAGVLNTGFGNASILNT 406 I FN G GNIG FN G NT GD NNLG GN GN N+G GN G N G GN N Sbjct 193 IPAFNLGLGNIGDFNLGNGNT---GD-NNLGSGNIGNLNLGSGNTGGSNVGSGNYGDGNL 248 Query 407 GLGNAGELNTGFGNAGFVNTGFDNSGNVNTGNGNSGNINTGSWNAGNVNTGFGIITDSGL 466 G GN G N G GN + G D+ N G+GN G+ N G+ N G+ N G G I D Sbjct 249 GSGNYGNSNLGSGNGVLSSVGSDS----NVGSGNLGSHNFGNGNTGSSNIGSGNIGD--- 301 Query 467 TNSGFGNTGTDVSGFFNTPTGPLAVDVSGFFNTASGGTVINGQTSGIGNIGVPGTLFGSV 526 TN GF N G++ GF N G + GF NT G I +G +G+ Sbjct 302 TNRGFANLGSNNFGFANLGDGNV-----GFANT--GNNNIGFGLTGDNQMGI-------- 346 Query 527 RSGLNTGLFNMGTAISG 543 LNTGL N G SG Sbjct 347 -GALNTGLANTGFGNSG 362 >gi|183981425|ref|YP_001849716.1| PPE family protein [Mycobacterium marinum M] gi|183174751|gb|ACC39861.1| PPE family protein [Mycobacterium marinum M] Length=632 Score = 392 bits (1008), Expect = 6e-107, Method: Compositional matrix adjust. Identities = 316/617 (52%), Positives = 370/617 (60%), Gaps = 107/617 (17%) Query 4 FSVLPPEINSLRMYLGAGSAPMLQAAAAWDGLAAELGTAASSFSSVTTGLTGQAWQGPAS 63 F+VLPPEINSLR++ GAGSAPML+AA AWDGL+AELGTAA SF+SVT+GLTGQAWQG A+ Sbjct 3 FAVLPPEINSLRIFAGAGSAPMLEAAVAWDGLSAELGTAAESFASVTSGLTGQAWQGAAA 62 Query 64 AAMAAAAAPYAGFLTTASAQAQLAAGQAKAVASVFEAAKAAIVPPAAVAANREAFLALIR 123 AMAA AAPY+ +L+ A+A+A AAGQAK VAS FEAA++A+V P AVAANR F+ L+ Sbjct 63 KAMAAVAAPYSSWLSAAAARAAGAAGQAKMVASAFEAARSAMVHPLAVAANRNVFVQLVM 122 Query 124 SNWLGLNAPWIAAVESLYEEYWAADVAAMTGYHAGASQAAAQLPLPAGLQQFLNTLP--- 180 SN G NAP IAA E YEE WAADVAAM GYH GAS AA+ LP QQ L+ LP Sbjct 123 SNLFGQNAPAIAATEGTYEEMWAADVAAMVGYHGGASAAASGLP---SWQQALSGLPGIG 179 Query 181 ----------------NLGIGNQGNANLGGGNTGSGNIGNGNKGSSNLGGGNIGNNNIGS 224 N G+GN G NLGGGN GS N+G+GN G+ NLGGGNIGN N+G Sbjct 180 QAAAAPAAALFNLPTVNTGLGNSGQWNLGGGNNGSFNLGSGNFGNLNLGGGNIGNLNLGG 239 Query 225 GNRG------------------------------SDNFGAGNVGTGNIGFGNQGPIDVNL 254 GN G S NFG GN G+GN FGN +D Sbjct 240 GNFGFANLGNGNIGNTNFGSGNNGNLNFGGGNLGSGNFGLGNFGSGN--FGNANGMDPVS 297 Query 255 LATPGQNNVGLGNIGNNNMGFGNTGDANTGGGNTGNGNIGGGNTGNNNFGFGNTGNNNIG 314 +T NN+G N G N G N G NIG N GNNNFGFGN GNNNIG Sbjct 298 FSTG------------NNIGDANLGAFNLGSANIGLSNIGLANIGNNNFGFGNVGNNNIG 345 Query 315 IGLTGNNQMGINLAGLLNSGSGNIGIGNSGTNNIGLFNSGSGNIGVFNTGANTLVPGDLN 374 GLTG+NQ+GI G LN+G+GN G GNSG NNIG FNSGSGN+GVFN+G Sbjct 346 FGLTGDNQVGI---GSLNAGTGNFGFGNSGDNNIGFFNSGSGNVGVFNSGD--------G 394 Query 375 NLGVGNSGNANIGFGNAGVLNTGFGNASILNTGL--------------------GNAGEL 414 N G GNSG N GF N+G LNTGFGNA N G GNAG Sbjct 395 NTGFGNSGGVNSGFWNSGGLNTGFGNAGANNLGFSNAGSSNVGDSNAGGSNMGSGNAGYS 454 Query 415 NTGFGNAG----FV--NTGFDNSGNVNTGNGNSGNINTGSWNAGNVNTGFG-IITDSGLT 467 NTGF N+G F+ NTGF NSG++NTG GN+G++NTG N+G+ NT G T +G T Sbjct 455 NTGFFNSGGSATFIGGNTGFFNSGDLNTGGGNAGSVNTGFLNSGDFNTTVGSADTPAGAT 514 Query 468 NSGFGNTGTDVSGFFNTPTGPLAVDVSGFFNTASGGTVINGQTSGIGNIGVPGTLFGSVR 527 SGF NTG +VSGF NT VSGF N +G + SG GN G F + Sbjct 515 QSGFWNTGDNVSGFNNTNDAMFGGGVSGFQNMNTGFFSVG---SGFGNTGEYQVGFNNAG 571 Query 528 SGLNTGLFNMGTAISGL 544 +G NTG+ N G+ +G Sbjct 572 TGFNTGVGNTGSFNTGF 588 Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust. Identities = 84/215 (40%), Positives = 102/215 (48%), Gaps = 34/215 (15%) Query 181 NLGIGNQGNANLGGGNTGSGNIGNGNKGSSNLGGGNIGNNNIG---SG------------ 225 N G GN G NLG N GS N+G+ N G SN+G GN G +N G SG Sbjct 415 NTGFGNAGANNLGFSNAGSSNVGDSNAGGSNMGSGNAGYSNTGFFNSGGSATFIGGNTGF 474 Query 226 -NRGSDNFGAGNVGTGNIGFGNQGPIDVNL--LATP-GQNNVGLGNIGNNNMGFGNTGDA 281 N G N G GN G+ N GF N G + + TP G G N G+N GF NT DA Sbjct 475 FNSGDLNTGGGNAGSVNTGFLNSGDFNTTVGSADTPAGATQSGFWNTGDNVSGFNNTNDA 534 Query 282 NTGGGNTGNGNI---------GGGNTGNNNFGFGNTGNN-NIGIGLTGNNQMGINLAGLL 331 GGG +G N+ G GNTG GF N G N G+G TG+ G N+ G Sbjct 535 MFGGGVSGFQNMNTGFFSVGSGFGNTGEYQVGFNNAGTGFNTGVGNTGSFNTGFNVTGSG 594 Query 332 NSGSGNIG-----IGNSGTNNIGLFNSGSGNIGVF 361 +SG G+ G + NSG ++ G FN G F Sbjct 595 SSGFGHSGDGSSGLANSGDSSSGAFNETDNTAGFF 629 >gi|183981151|ref|YP_001849442.1| PPE family protein [Mycobacterium marinum M] gi|183174477|gb|ACC39587.1| PPE family protein [Mycobacterium marinum M] Length=564 Score = 387 bits (994), Expect = 3e-105, Method: Compositional matrix adjust. Identities = 310/617 (51%), Positives = 362/617 (59%), Gaps = 122/617 (19%) Query 1 MAHFSVLPPEINSLRMYLGAGSAPMLQAAAAWDGLAAELGTAASSFSSVTTGLTGQAWQG 60 M +F++LPPE+NSLRM+ GAGSAPML AA AWD +A+ELG AASSFSSVT+GL G AWQG Sbjct 1 MTNFAMLPPEVNSLRMFTGAGSAPMLDAATAWDSMASELGVAASSFSSVTSGLAGDAWQG 60 Query 61 PASAAMAAAAAPYAGFLTTASAQAQLAAGQAKAVASVFEAAKAAIVPPAAVAANREAFLA 120 ASAAM AAA+ YA L AS +A AA QAKAVA VFE A+AA+V P AVAANR AFL Sbjct 61 AASAAMTAAASSYAKLLGAASTRAAAAATQAKAVAGVFEDARAAMVHPLAVAANRSAFLK 120 Query 121 LIRSNWLGLNAPWIAAVESLYEEYWAADVAAMTGYHAGASQAAAQLPLPAGLQQFLNTLP 180 L++SNWLGLNAP I A E YE+ WA DVA M GYHAG S AAA LP GLQQ L TLP Sbjct 121 LVQSNWLGLNAPAIMATEGHYEQMWAQDVATMAGYHAGVSSAAAA--LPGGLQQLLKTLP 178 Query 181 NLGIGNQGNANLGGGNTGSGNIGNGNKGSSNLGGGNIGNNNIGSG--------------- 225 NLGIGN GNAN+G GN G+ NIG GN G +GN I G Sbjct 179 NLGIGNIGNANIGNGNIGTANIGTGNSG--------VGNTPITPGIAGNYNIGGGNNGNN 230 Query 226 -----NRGSDNFGAGNVGTGNIGFGNQGPIDVNLL------ATPGQNNVGLGNIGNNNMG 274 N G+ NFG GN G GNIGFGN GP +++ L PG NNVG+GN GNNN G Sbjct 231 NLGAGNYGNFNFGFGNKGDGNIGFGNGGPANLSRLNPFALQPAPGNNNVGMGNTGNNNFG 290 Query 275 FGN------------------------------------TGDANTGGGNTGNGNIGGGNT 298 GN G + G NTG+GNIG GN+ Sbjct 291 LGNLGDGNIGGGNYGNNNIGLGLLGSNLVGVGGAYYDTAAGQFHFDGLNTGSGNIGIGNS 350 Query 299 GNNNFGFGNTGNNNIGIGLTGNNQMGINLAGLLNSGSGNIGIGNSGTNNIGLFNSGSGNI 358 GNNN GF N+G+ NIG +G N + L G LNS G+GNSG N G+ N+G+G Sbjct 351 GNNNIGFFNSGDGNIGAFSSGTNSV---LPGHLNS----FGVGNSGIGNFGVGNAGAG-- 401 Query 359 GVFNTGANTLVPGDLNNLGVGNSGNANIGFGNAGVLNTGFGNASILNTGLGNAGELNTGF 418 N G GNSG N G GNAG ++TG N + LNTG N+G+ NTGF Sbjct 402 ----------------NFGAGNSGLLNTGVGNAGSIDTGAFNGNNLNTGFLNSGKTNTGF 445 Query 419 GNAGFVNTGFDNSGNVNTGNGNSGNINTGSWNAGNVNTGFGIITDSGLTNSGFGNTG-TD 477 GN+G NTGF WN+G+VNTG G TDSGL SGFGNTG Sbjct 446 GNSGHENTGF--------------------WNSGDVNTGVGATTDSGLATSGFGNTGEVG 485 Query 478 VSGFFNTPTGPLAV-DVSGFFNTASGGTVINGQTSGIGNIGVP---GTLFGSVRSGLNTG 533 +SGF NT TG D+SGFFNTA+GG+ G +SG N G+ G V SG N+G Sbjct 486 ISGFGNTATGGFRSGDMSGFFNTAAGGSSYTGVSSGFFNTGLTDPIGPFASGVLSGFNSG 545 Query 534 LFNMGTAISGLFNLRQL 550 +FN G A+SGLF+L QL Sbjct 546 IFNTGIAVSGLFSLSQL 562 >gi|340628497|ref|YP_004746949.1| PPE family protein [Mycobacterium canettii CIPT 140010059] gi|340006687|emb|CCC45875.1| PPE family protein [Mycobacterium canettii CIPT 140010059] Length=582 Score = 384 bits (985), Expect = 3e-104, Method: Compositional matrix adjust. Identities = 331/608 (55%), Positives = 383/608 (63%), Gaps = 101/608 (16%) Query 3 HFSVLPPEINSLRMYLGAGSAPMLQAAAAWDGLAAELGTAASSFSSVTTGLTGQAWQGPA 62 +++VLPPE+NSLRM+ GAGSAPML AA AWDGLAAELG+AASSF SVT+ L QAWQGPA Sbjct 2 NYAVLPPELNSLRMFTGAGSAPMLAAAVAWDGLAAELGSAASSFGSVTSSLASQAWQGPA 61 Query 63 SAAMAAAAAPYAGFLTTASAQAQLAAGQAKAVASVFEAAKAAIVPPAAVAANREAFLALI 122 +AAMAAAAAPYAG+L+ A+A+A AA QAKAVAS FEAA+AA V P VAANR AF L+ Sbjct 62 AAAMAAAAAPYAGWLSAAAARAAGAAAQAKAVASAFEAARAATVHPLVVAANRSAFAQLV 121 Query 123 RSNWLGLNAPWIAAVESLYEEYWAADVAAMTGYHAGASQAAAQLPLPAGLQQFLNTLPNL 182 SNW GLNAP IAAVE YE+ WAADVAAM GYH+GAS AA QL +P QQ L LPNL Sbjct 122 MSNWFGLNAPLIAAVEGAYEQMWAADVAAMVGYHSGASAAAEQL-VP--FQQALQQLPNL 178 Query 183 GIGNQGNANLGGGNTGSGNIGNGNKGSSNLGGGNIGNNNIGS------------------ 224 GIGN GNANLGGGNTG N GNGN G++NLG GN G+ N+GS Sbjct 179 GIGNIGNANLGGGNTGDLNTGNGNIGNTNLGSGNRGDANLGSGNIGNSNVGGGNFGNGNF 238 Query 225 -----------------GNRGSDNFGAGNVGTGNIGFGNQGPIDVNLLATPGQNNVGLGN 267 GN G+ N G+GN G N+GFGN G NNVG GN Sbjct 239 GSGNGRAGLPGSGNVGNGNLGNSNLGSGNTGNSNVGFGNT-----------GNNNVGTGN 287 Query 268 IGNNNMGFGNTGDANTGGGNTGNGNIGGGNTGNNNFGFGNTGNNNIGIGLTGNNQMGINL 327 G+ N+G GNTG +N G GN G GNI GFGNTGN NIG GLTGNNQ+GI Sbjct 288 AGSGNIGAGNTGSSNWGFGNNGIGNI----------GFGNTGNGNIGFGLTGNNQVGI-- 335 Query 328 AGLLNSGSGNIGIGNSGTNNIGLFNSGSGNIGVFNTGANTLVPGDL----------NNLG 377 G LNSGSGNIG+ NSGTNN+G FNSG+GN+G+ N+ + G+ +N G Sbjct 336 -GGLNSGSGNIGLFNSGTNNVGFFNSGNGNLGIGNSSDANVGIGNSGATVGPFVAGHNTG 394 Query 378 VGNSGNANIGFGNAGVLNTGFGNASILNTGLGNAGELNTGFGNAGFVNTGFDNSGNVNTG 437 GNSG+ N G GNAG +NTGFGN +N G GN+G+LN G NAG +NTG NSG NTG Sbjct 395 FGNSGSLNTGMGNAGGVNTGFGNGGAINLGFGNSGQLNAGSFNAGSINTGNFNSGQGNTG 454 Query 438 N----------GNSGNINTGSWNAGNVNTGFGIITDSGLTNSGFGNTGTDVSGFFNTPTG 487 + NSG NTG++NAG++NTGFG + NSGFGN GT+ SGFFNT Sbjct 455 DFNAGVRNTGWSNSGLTNTGAFNAGSLNTGFGAVGTGPGPNSGFGNAGTNNSGFFNT--- 511 Query 488 PLAVDVSGFFNTASG--------GTVINGQTSGIGNIGVPGTLFGSVRSG-LNTGLFNMG 538 V SGF N S GTVI +G GN G G SG LN+G FN G Sbjct 512 --GVGSSGFQNGGSNNSGLQNAVGTVI---AAGFGNTGA--QTVGIANSGVLNSGFFNSG 564 Query 539 TAISGLFN 546 SG FN Sbjct 565 VHNSGGFN 572 Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 137/320 (43%), Positives = 172/320 (54%), Gaps = 55/320 (17%) Query 188 GNANLGGGNTGSGNIGNGNKGSSNLGGGNIGNNNIGSGNRGSDNFGAGNVGTGNIGFGNQ 247 GN+N+G GNTG+ N+G GN GS N+G GN G++N G GN G N G GN G GNIGFG Sbjct 269 GNSNVGFGNTGNNNVGTGNAGSGNIGAGNTGSSNWGFGNNGIGNIGFGNTGNGNIGFGLT 328 Query 248 GPIDVNLLA-TPGQNNVGLGNIGNNNMGFGNTGDANTGGGNTGNGNIGGGNTG------- 299 G V + G N+GL N G NN+GF N+G+ N G GN+ + N+G GN+G Sbjct 329 GNNQVGIGGLNSGSGNIGLFNSGTNNVGFFNSGNGNLGIGNSSDANVGIGNSGATVGPFV 388 Query 300 -NNNFGFGNTGNNNIGIGLTGNNQMGINLAGLLNSGSGNIGIGNSGTNNIGLFNSGSGNI 358 +N GFGN+G+ N G+G N G+N G N G+ N+G GNSG N G FN+GS N Sbjct 389 AGHNTGFGNSGSLNTGMG----NAGGVN-TGFGNGGAINLGFGNSGQLNAGSFNAGSINT 443 Query 359 GVFNTGANTLVPGDLN----NLGVGNSGNANIGFGNAGVLNTGFG--------------- 399 G FN+G GD N N G NSG N G NAG LNTGFG Sbjct 444 GNFNSGQGNT--GDFNAGVRNTGWSNSGLTNTGAFNAGSLNTGFGAVGTGPGPNSGFGNA 501 Query 400 ---NASILNTGLGNAGELN-----------------TGFGNAGFVNTGFDNSGNVNTGNG 439 N+ NTG+G++G N GFGN G G NSG +N+G Sbjct 502 GTNNSGFFNTGVGSSGFQNGGSNNSGLQNAVGTVIAAGFGNTGAQTVGIANSGVLNSGFF 561 Query 440 NSGNINTGSWNAGNVNTGFG 459 NSG N+G +N+ N +GFG Sbjct 562 NSGVHNSGGFNSENQRSGFG 581 Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 85/210 (41%), Positives = 99/210 (48%), Gaps = 37/210 (17%) Query 181 NLGIGNQGNANLGGGNTGS--------GNIGNGNKGSSNLGGGNIGNNNIGSGNRGSDNF 232 NLGIGN +AN+G GN+G+ N G GN GS N G GN G N G GN G+ N Sbjct 364 NLGIGNSSDANVGIGNSGATVGPFVAGHNTGFGNSGSLNTGMGNAGGVNTGFGNGGAINL 423 Query 233 GAGNVGTGNIGFGNQGPIDVNLLAT----PGQNNVGLGNIGNNNMGFGNTGDANTGGGNT 288 G GN G N G N G I+ + G N G+ N G +N G NTG N G NT Sbjct 424 GFGNSGQLNAGSFNAGSINTGNFNSGQGNTGDFNAGVRNTGWSNSGLTNTGAFNAGSLNT 483 Query 289 GNG--------NIGGGNTGNNNFGFGNTGNNNIGIGLTGNNQMGINLA------------ 328 G G N G GN G NN GF NTG + G G+N G+ A Sbjct 484 GFGAVGTGPGPNSGFGNAGTNNSGFFNTGVGSSGFQNGGSNNSGLQNAVGTVIAAGFGNT 543 Query 329 -----GLLNSGSGNIGIGNSGTNNIGLFNS 353 G+ NSG N G NSG +N G FNS Sbjct 544 GAQTVGIANSGVLNSGFFNSGVHNSGGFNS 573 >gi|15843145|ref|NP_338182.1| PPE family protein [Mycobacterium tuberculosis CDC1551] gi|31794709|ref|NP_857202.1| PPE family protein [Mycobacterium bovis AF2122/97] gi|57117121|ref|YP_177985.1| PPE family protein [Mycobacterium tuberculosis H37Rv] 41 more sequence titles Length=582 Score = 382 bits (982), Expect = 6e-104, Method: Compositional matrix adjust. Identities = 331/608 (55%), Positives = 383/608 (63%), Gaps = 101/608 (16%) Query 3 HFSVLPPEINSLRMYLGAGSAPMLQAAAAWDGLAAELGTAASSFSSVTTGLTGQAWQGPA 62 +++VLPPE+NSLRM+ GAGSAPML AA AWDGLAAELG+AASSF SVT+ L QAWQGPA Sbjct 2 NYAVLPPELNSLRMFTGAGSAPMLAAAVAWDGLAAELGSAASSFGSVTSDLASQAWQGPA 61 Query 63 SAAMAAAAAPYAGFLTTASAQAQLAAGQAKAVASVFEAAKAAIVPPAAVAANREAFLALI 122 +AAMAAAAAPYAG+L+ A+A+A AA QAKAVAS FEAA+AA V P VAANR AF L+ Sbjct 62 AAAMAAAAAPYAGWLSAAAARAAGAAAQAKAVASAFEAARAATVHPLLVAANRNAFAQLV 121 Query 123 RSNWLGLNAPWIAAVESLYEEYWAADVAAMTGYHAGASQAAAQLPLPAGLQQFLNTLPNL 182 SNW GLNAP IAAVE YE+ WAADVAAM GYH+GAS AA QL +P QQ L LPNL Sbjct 122 MSNWFGLNAPLIAAVEGAYEQMWAADVAAMVGYHSGASAAAEQL-VP--FQQALQQLPNL 178 Query 183 GIGNQGNANLGGGNTGSGNIGNGNKGSSNLGGGNIGNNNIGS------------------ 224 GIGN GNANLGGGNTG N GNGN G++NLG GN G+ N+GS Sbjct 179 GIGNIGNANLGGGNTGDLNTGNGNIGNTNLGSGNRGDANLGSGNIGNSNVGGGNVGNGNF 238 Query 225 -----------------GNRGSDNFGAGNVGTGNIGFGNQGPIDVNLLATPGQNNVGLGN 267 GN G+ N G+GN G N+GFGN G NNVG GN Sbjct 239 GSGNGRAGLPGSGNVGNGNLGNSNLGSGNTGNSNVGFGNT-----------GNNNVGTGN 287 Query 268 IGNNNMGFGNTGDANTGGGNTGNGNIGGGNTGNNNFGFGNTGNNNIGIGLTGNNQMGINL 327 G+ N+G GNTG +N G GN G GNI GFGNTGN NIG GLTGNNQ+GI Sbjct 288 AGSGNIGAGNTGSSNWGFGNNGIGNI----------GFGNTGNGNIGFGLTGNNQVGI-- 335 Query 328 AGLLNSGSGNIGIGNSGTNNIGLFNSGSGNIGVFNTGANTLVPGDL----------NNLG 377 G LNSGSGNIG+ NSGTNN+G FNSG+GN+G+ N+ + G+ +N G Sbjct 336 -GGLNSGSGNIGLFNSGTNNVGFFNSGNGNLGIGNSSDANVGIGNSGATVGPFVAGHNTG 394 Query 378 VGNSGNANIGFGNAGVLNTGFGNASILNTGLGNAGELNTGFGNAGFVNTGFDNSGNVNTG 437 GNSG+ N G GNAG +NTGFGN +N G GN+G+LN G NAG +NTG NSG NTG Sbjct 395 FGNSGSLNTGMGNAGGVNTGFGNGGAINLGFGNSGQLNAGSFNAGSINTGNFNSGQGNTG 454 Query 438 N----------GNSGNINTGSWNAGNVNTGFGIITDSGLTNSGFGNTGTDVSGFFNTPTG 487 + NSG NTG++NAG++NTGFG + NSGFGN GT+ SGFFNT Sbjct 455 DFNAGVRNTGWSNSGLTNTGAFNAGSLNTGFGAVGTGSGPNSGFGNAGTNNSGFFNT--- 511 Query 488 PLAVDVSGFFNTASG--------GTVINGQTSGIGNIGVPGTLFGSVRSG-LNTGLFNMG 538 V SGF N S GTVI +G GN G G SG LN+G FN G Sbjct 512 --GVGSSGFQNGGSNNSGLQNAVGTVI---AAGFGNTGAQ--TVGIANSGVLNSGFFNSG 564 Query 539 TAISGLFN 546 SG FN Sbjct 565 VHNSGGFN 572 Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 137/320 (43%), Positives = 172/320 (54%), Gaps = 55/320 (17%) Query 188 GNANLGGGNTGSGNIGNGNKGSSNLGGGNIGNNNIGSGNRGSDNFGAGNVGTGNIGFGNQ 247 GN+N+G GNTG+ N+G GN GS N+G GN G++N G GN G N G GN G GNIGFG Sbjct 269 GNSNVGFGNTGNNNVGTGNAGSGNIGAGNTGSSNWGFGNNGIGNIGFGNTGNGNIGFGLT 328 Query 248 GPIDVNLLA-TPGQNNVGLGNIGNNNMGFGNTGDANTGGGNTGNGNIGGGNTG------- 299 G V + G N+GL N G NN+GF N+G+ N G GN+ + N+G GN+G Sbjct 329 GNNQVGIGGLNSGSGNIGLFNSGTNNVGFFNSGNGNLGIGNSSDANVGIGNSGATVGPFV 388 Query 300 -NNNFGFGNTGNNNIGIGLTGNNQMGINLAGLLNSGSGNIGIGNSGTNNIGLFNSGSGNI 358 +N GFGN+G+ N G+G N G+N G N G+ N+G GNSG N G FN+GS N Sbjct 389 AGHNTGFGNSGSLNTGMG----NAGGVN-TGFGNGGAINLGFGNSGQLNAGSFNAGSINT 443 Query 359 GVFNTGANTLVPGDLN----NLGVGNSGNANIGFGNAGVLNTGFG--------------- 399 G FN+G GD N N G NSG N G NAG LNTGFG Sbjct 444 GNFNSGQGN--TGDFNAGVRNTGWSNSGLTNTGAFNAGSLNTGFGAVGTGSGPNSGFGNA 501 Query 400 ---NASILNTGLGNAGELN-----------------TGFGNAGFVNTGFDNSGNVNTGNG 439 N+ NTG+G++G N GFGN G G NSG +N+G Sbjct 502 GTNNSGFFNTGVGSSGFQNGGSNNSGLQNAVGTVIAAGFGNTGAQTVGIANSGVLNSGFF 561 Query 440 NSGNINTGSWNAGNVNTGFG 459 NSG N+G +N+ N +GFG Sbjct 562 NSGVHNSGGFNSENQRSGFG 581 Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 85/210 (41%), Positives = 99/210 (48%), Gaps = 37/210 (17%) Query 181 NLGIGNQGNANLGGGNTGS--------GNIGNGNKGSSNLGGGNIGNNNIGSGNRGSDNF 232 NLGIGN +AN+G GN+G+ N G GN GS N G GN G N G GN G+ N Sbjct 364 NLGIGNSSDANVGIGNSGATVGPFVAGHNTGFGNSGSLNTGMGNAGGVNTGFGNGGAINL 423 Query 233 GAGNVGTGNIGFGNQGPIDVNLLAT----PGQNNVGLGNIGNNNMGFGNTGDANTGGGNT 288 G GN G N G N G I+ + G N G+ N G +N G NTG N G NT Sbjct 424 GFGNSGQLNAGSFNAGSINTGNFNSGQGNTGDFNAGVRNTGWSNSGLTNTGAFNAGSLNT 483 Query 289 GNG--------NIGGGNTGNNNFGFGNTGNNNIGIGLTGNNQMGINLA------------ 328 G G N G GN G NN GF NTG + G G+N G+ A Sbjct 484 GFGAVGTGSGPNSGFGNAGTNNSGFFNTGVGSSGFQNGGSNNSGLQNAVGTVIAAGFGNT 543 Query 329 -----GLLNSGSGNIGIGNSGTNNIGLFNS 353 G+ NSG N G NSG +N G FNS Sbjct 544 GAQTVGIANSGVLNSGFFNSGVHNSGGFNS 573 >gi|340625774|ref|YP_004744226.1| PPE family protein [Mycobacterium canettii CIPT 140010059] gi|340003964|emb|CCC43099.1| PPE family protein [Mycobacterium canettii CIPT 140010059] Length=646 Score = 382 bits (981), Expect = 1e-103, Method: Compositional matrix adjust. Identities = 326/596 (55%), Positives = 377/596 (64%), Gaps = 73/596 (12%) Query 1 MAHFSVLPPEINSLRMYLGAGSAPMLQAAAAWDGLAAELGTAASSFSSVTTGLTGQAWQG 60 M F+ LPPE NSLRMYLGAGS P+L AA AWDGLA EL AASSF SVT+ L G AWQG Sbjct 1 MVSFAWLPPETNSLRMYLGAGSQPLLAAAGAWDGLAEELHAAASSFGSVTSELAGGAWQG 60 Query 61 PASAAMAAAAAPYAGFLTTASAQAQLAAGQAKAVASVFEAAKAAIVPPAAVAANREAFLA 120 PASAAMA+ A PYA +L A AQA+LAAGQA+A A FE A A +V PA V ANR Sbjct 61 PASAAMASVAGPYASWLIAAGAQAELAAGQARAAAGAFEEALAGVVHPAVVQANRVRTWL 120 Query 121 LIRSNWLGLNAPWIAAVESLYEEYWAADVAAMTGYHAGASQAAAQLPLPAGLQQFLNTLP 180 L SN G NAP IAA+E+ YE+ WA DVAAM GYHA +S AAQL QQ L + Sbjct 121 LAVSNVFGQNAPAIAAMEATYEQMWAQDVAAMAGYHAASSAVAAQL---TSWQQALPNI- 176 Query 181 NLGIGNQGNANLGGGNT--------------------------------GSGNIGNGNKG 208 NLG+GN GN N+G GNT GSGNIGN N G Sbjct 177 NLGLGNIGNLNVGNGNTGDYNLGNGNFGNANFGGGNGSAFHGQISSFNVGSGNIGNFNLG 236 Query 209 SS-----------NLGGGNIGNNNIGSGNRGSDNFGAGNVGTGNIGFGNQGP-IDVNLLA 256 S N+G GNIGN N+GSGN G +N G GN+G GNIG GN GP Sbjct 237 SGNGNAGIGPSSFNVGSGNIGNANVGSGNSGDNNVGFGNLGNGNIGIGNAGPNTGSPATP 296 Query 257 TPGQNNVGLGNIGNNNMGFGNTGDANTGGGNTGNGNIGGGNTGNNNFGFGNTGNNNIGIG 316 TPG NVG+GN GN N G GNTG+AN G GN GNGN+G GN+G++NFG GNTG NNIGIG Sbjct 297 TPGNGNVGVGNGGNGNFGGGNTGNANIGLGNVGNGNVGFGNSGSHNFGLGNTGTNNIGIG 356 Query 317 LTGNNQMGINLAGLLNSGSGNIGIGNSGTNNIGLFNSGSGNIGVFNTGANTLVPGDLNNL 376 LTG+NQ+G G LNSGSGNIG GNSGT NIG FNSGSGN GV N+G + N Sbjct 357 LTGSNQIGF---GGLNSGSGNIGFGNSGTGNIGFFNSGSGNFGVGNSG--------VTNT 405 Query 377 GVGNSGNANIGFGNAGVLNTGFGNASILNTGLGNAGELNTGFGNAGFVNTGFDNSGNVNT 436 GV NSGN N GFGN+G++NTGFGNAS +NTG N+G NTG GNAG NTG N G +NT Sbjct 406 GVANSGNINTGFGNSGLINTGFGNASTVNTGFANSGGANTGIGNAGDYNTGNFNGGIINT 465 Query 437 GNGNSGNINTGSWNAGNVNTGFGIITDSGLTNSGFGNTGTDVSGFFNTPTGPLAVDVSGF 496 G+ NSG N+GS+N GN N+GF +SGLTN+GF N+G +G FN G L +GF Sbjct 466 GSFNSGAFNSGSFNGGNANSGF---FNSGLTNTGFANSGNINTGGFN--AGNLN---TGF 517 Query 497 FNTASGGTVINGQTSGIGNIGVPGTLFGSVRSGLNTGLFNMGT-AISGLFNLRQLL 551 NTA G G+ SG GN G + F + G N+G +N+GT ISG N Q + Sbjct 518 GNTADG----PGENSGFGNTGSGNSGFNNSGKG-NSGAYNLGTLQISGFGNSGQSV 568 Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 129/319 (41%), Positives = 156/319 (49%), Gaps = 73/319 (22%) Query 184 IGNQGNANLGGGNTGSGNIGNGNKGSSNLGGGNIGNNNIGSG--NRGSDNFGAGNVGTGN 241 +GN GN N+G GN+GS N G GN G++N+G G G+N IG G N GS N G GN GTGN Sbjct 325 LGNVGNGNVGFGNSGSHNFGLGNTGTNNIGIGLTGSNQIGFGGLNSGSGNIGFGNSGTGN 384 Query 242 IGFGNQGPIDVNL---------LATPGQNNVGLGNIGNNNMGFGN-----TGDANTGGGN 287 IGF N G + + +A G N G GN G N GFGN TG AN+GG N Sbjct 385 IGFFNSGSGNFGVGNSGVTNTGVANSGNINTGFGNSGLINTGFGNASTVNTGFANSGGAN 444 Query 288 TGNGNIGGGNTGN-------------------------NNFGFGNTGNNNIGIGLTGNNQ 322 TG GN G NTGN N GF N+G N G +GN Sbjct 445 TGIGNAGDYNTGNFNGGIINTGSFNSGAFNSGSFNGGNANSGFFNSGLTNTGFANSGNIN 504 Query 323 MGINLAGLLNSGSGNI--------GIGNSGTNNIGLFNSGSGNIGVFNTGANTLVPGDLN 374 G AG LN+G GN G GN+G+ N G NSG GN G +N G L Sbjct 505 TGGFNAGNLNTGFGNTADGPGENSGFGNTGSGNSGFNNSGKGNSGAYNLGT-------LQ 557 Query 375 NLGVGNSGNANIGFGNAGVLNTGFGNASI------LNTGLGNAGELNTGFGN-------- 420 G GNSG + G+ N+G + +GFGN +G GN GEL +GFGN Sbjct 558 ISGFGNSGQSVSGYNNSGNIISGFGNKGTGSFNLGFISGFGNTGELQSGFGNLDADPDSN 617 Query 421 ---AGFVNTGFDNSGNVNT 436 +GF N+G +SG NT Sbjct 618 SAASGFGNSGKQDSGGFNT 636 >gi|289440962|ref|ZP_06430706.1| PPE family protein [Mycobacterium tuberculosis T46] gi|289571774|ref|ZP_06452001.1| PPE family protein [Mycobacterium tuberculosis T17] gi|289413881|gb|EFD11121.1| PPE family protein [Mycobacterium tuberculosis T46] gi|289545528|gb|EFD49176.1| PPE family protein [Mycobacterium tuberculosis T17] Length=582 Score = 381 bits (979), Expect = 2e-103, Method: Compositional matrix adjust. Identities = 330/608 (55%), Positives = 382/608 (63%), Gaps = 101/608 (16%) Query 3 HFSVLPPEINSLRMYLGAGSAPMLQAAAAWDGLAAELGTAASSFSSVTTGLTGQAWQGPA 62 +++VLPPE+NSLRM+ GAGSAPML AA AWDGLAAELG+AASSF SVT+ L QAWQGPA Sbjct 2 NYAVLPPELNSLRMFTGAGSAPMLAAAVAWDGLAAELGSAASSFGSVTSDLASQAWQGPA 61 Query 63 SAAMAAAAAPYAGFLTTASAQAQLAAGQAKAVASVFEAAKAAIVPPAAVAANREAFLALI 122 +AAMAAAAAPYAG+L+ A+A+A AA QAKAVAS FEAA+AA V P VAANR AF L+ Sbjct 62 AAAMAAAAAPYAGWLSAAAARAAGAAAQAKAVASAFEAARAATVHPLLVAANRNAFAQLV 121 Query 123 RSNWLGLNAPWIAAVESLYEEYWAADVAAMTGYHAGASQAAAQLPLPAGLQQFLNTLPNL 182 SNW GLNAP IAAVE YE+ WAADVAAM GYH+GAS AA QL +P QQ L LPNL Sbjct 122 MSNWFGLNAPLIAAVEGAYEQMWAADVAAMVGYHSGASAAAEQL-VP--FQQALQQLPNL 178 Query 183 GIGNQGNANLGGGNTGSGNIGNGNKGSSNLGGGNIGNNNIGS------------------ 224 GIGN GNANLGGGNTG N GNGN G++NLG GN G+ N+GS Sbjct 179 GIGNIGNANLGGGNTGDLNTGNGNIGNTNLGSGNRGDANLGSGNIGNSNVGGGNVGNGNF 238 Query 225 -----------------GNRGSDNFGAGNVGTGNIGFGNQGPIDVNLLATPGQNNVGLGN 267 GN G+ N G+GN G N+GFGN G NNVG GN Sbjct 239 GSGNGRAGLPGSGNVGNGNLGNSNLGSGNTGNSNVGFGNT-----------GNNNVGTGN 287 Query 268 IGNNNMGFGNTGDANTGGGNTGNGNIGGGNTGNNNFGFGNTGNNNIGIGLTGNNQMGINL 327 G+ N+G GNTG +N G GN G GNI GFGNTGN NIG GLTGNNQ+GI Sbjct 288 AGSGNIGAGNTGSSNWGFGNNGIGNI----------GFGNTGNGNIGFGLTGNNQVGI-- 335 Query 328 AGLLNSGSGNIGIGNSGTNNIGLFNSGSGNIGVFNTGANTLVPGDL----------NNLG 377 G LNSGSGNIG+ NSGTNN+G FNSG+GN+G+ N+ + G+ +N G Sbjct 336 -GGLNSGSGNIGLFNSGTNNVGFFNSGNGNLGIGNSSDANVGIGNSGATVGPFVAGHNTG 394 Query 378 VGNSGNANIGFGNAGVLNTGFGNASILNTGLGNAGELNTGFGNAGFVNTGFDNSGNVNTG 437 GNSG+ N G GNAG +NTGFGN +N G GN+G+LN G NAG +NTG NSG NTG Sbjct 395 FGNSGSLNTGMGNAGGVNTGFGNGGAINLGFGNSGQLNAGSFNAGSINTGNFNSGQGNTG 454 Query 438 N----------GNSGNINTGSWNAGNVNTGFGIITDSGLTNSGFGNTGTDVSGFFNTPTG 487 + NSG NTG++NAG++NTGFG + NSGFGN GT+ SGFFNT Sbjct 455 DFNAGVRNTGWSNSGLTNTGAFNAGSLNTGFGAVGTGSGPNSGFGNAGTNNSGFFNT--- 511 Query 488 PLAVDVSGFFNTASG--------GTVINGQTSGIGNIGVPGTLFGSVRSG-LNTGLFNMG 538 V SGF N S GTVI +G GN G G SG LN+G FN Sbjct 512 --GVGSSGFQNGGSNNSGLQNAVGTVI---AAGFGNTGAQ--TVGIANSGVLNSGFFNSS 564 Query 539 TAISGLFN 546 SG FN Sbjct 565 VHNSGGFN 572 Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 136/320 (43%), Positives = 171/320 (54%), Gaps = 55/320 (17%) Query 188 GNANLGGGNTGSGNIGNGNKGSSNLGGGNIGNNNIGSGNRGSDNFGAGNVGTGNIGFGNQ 247 GN+N+G GNTG+ N+G GN GS N+G GN G++N G GN G N G GN G GNIGFG Sbjct 269 GNSNVGFGNTGNNNVGTGNAGSGNIGAGNTGSSNWGFGNNGIGNIGFGNTGNGNIGFGLT 328 Query 248 GPIDVNLLA-TPGQNNVGLGNIGNNNMGFGNTGDANTGGGNTGNGNIGGGNTG------- 299 G V + G N+GL N G NN+GF N+G+ N G GN+ + N+G GN+G Sbjct 329 GNNQVGIGGLNSGSGNIGLFNSGTNNVGFFNSGNGNLGIGNSSDANVGIGNSGATVGPFV 388 Query 300 -NNNFGFGNTGNNNIGIGLTGNNQMGINLAGLLNSGSGNIGIGNSGTNNIGLFNSGSGNI 358 +N GFGN+G+ N G+G N G+N G N G+ N+G GNSG N G FN+GS N Sbjct 389 AGHNTGFGNSGSLNTGMG----NAGGVN-TGFGNGGAINLGFGNSGQLNAGSFNAGSINT 443 Query 359 GVFNTGANTLVPGDLN----NLGVGNSGNANIGFGNAGVLNTGFG--------------- 399 G FN+G GD N N G NSG N G NAG LNTGFG Sbjct 444 GNFNSGQGN--TGDFNAGVRNTGWSNSGLTNTGAFNAGSLNTGFGAVGTGSGPNSGFGNA 501 Query 400 ---NASILNTGLGNAGELN-----------------TGFGNAGFVNTGFDNSGNVNTGNG 439 N+ NTG+G++G N GFGN G G NSG +N+G Sbjct 502 GTNNSGFFNTGVGSSGFQNGGSNNSGLQNAVGTVIAAGFGNTGAQTVGIANSGVLNSGFF 561 Query 440 NSGNINTGSWNAGNVNTGFG 459 NS N+G +N+ N +GFG Sbjct 562 NSSVHNSGGFNSENQRSGFG 581 Score = 97.1 bits (240), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 128/312 (42%), Positives = 154/312 (50%), Gaps = 73/312 (23%) Query 181 NLGIGNQGNANLGGGNTGSGNIGNGNKGSSNLGGGNIGNNNIGSGNRGSDNFGAG----- 235 N+G GN GN N+G GN GSGNIG GN GSSN G GN G NIG GN G+ N G G Sbjct 272 NVGFGNTGNNNVGTGNAGSGNIGAGNTGSSNWGFGNNGIGNIGFGNTGNGNIGFGLTGNN 331 Query 236 -------NVGTGNIGFGNQGPIDVNLLATPGQNNVGLGN-------IGN----------- 270 N G+GNIG N G +V G N+G+GN IGN Sbjct 332 QVGIGGLNSGSGNIGLFNSGTNNVGFF-NSGNGNLGIGNSSDANVGIGNSGATVGPFVAG 390 Query 271 NNMGFGNTGDANTGGGNTGNGNIGGGNTGNNNFGFGN---------------TGNNNIGI 315 +N GFGN+G NTG GN G N G GN G N GFGN TGN N G Sbjct 391 HNTGFGNSGSLNTGMGNAGGVNTGFGNGGAINLGFGNSGQLNAGSFNAGSINTGNFNSGQ 450 Query 316 GLTGNNQMGINL---------------AGLLNSGSG--------NIGIGNSGTNNIGLFN 352 G TG+ G+ AG LN+G G N G GN+GTNN G FN Sbjct 451 GNTGDFNAGVRNTGWSNSGLTNTGAFNAGSLNTGFGAVGTGSGPNSGFGNAGTNNSGFFN 510 Query 353 SGSGNIGVFNTGANTL----VPGDLNNLGVGNSGNANIGFGNAGVLNTGFGNASILNTGL 408 +G G+ G N G+N G + G GN+G +G N+GVLN+GF N+S+ N+G Sbjct 511 TGVGSSGFQNGGSNNSGLQNAVGTVIAAGFGNTGAQTVGIANSGVLNSGFFNSSVHNSGG 570 Query 409 GNAGELNTGFGN 420 N+ +GFGN Sbjct 571 FNSENQRSGFGN 582 >gi|240170430|ref|ZP_04749089.1| PPE family protein [Mycobacterium kansasii ATCC 12478] Length=652 Score = 381 bits (978), Expect = 2e-103, Method: Compositional matrix adjust. Identities = 318/634 (51%), Positives = 377/634 (60%), Gaps = 113/634 (17%) Query 7 LPPEINSLRMYLGAGSAPMLQAAAAWDGLAAELGTAASSFSSVTTGLTGQAWQGPASAAM 66 +PPEINSLR++ GAGSAPML+AA AWD LAAELG+AA SF SVT GL GQAWQG AS AM Sbjct 1 MPPEINSLRIFAGAGSAPMLEAAVAWDSLAAELGSAAESFGSVTAGLAGQAWQGAASRAM 60 Query 67 AAAAAPYAGFLTTASAQAQLAAGQAKAVASVFEAAKAAIVPPAAVAANREAFLALIRSNW 126 AAAAPY+G+L+TA+A+A A+ QAKAVAS FE A+ A+V P AVAANR AF+ L+ SN Sbjct 61 VAAAAPYSGWLSTAAARAAAASAQAKAVASAFETARVAMVHPLAVAANRNAFVRLVLSNV 120 Query 127 LGLNAPWIAAVESLYEEYWAADVAAMTGYHAGASQAAAQLP-LPAGLQQFLN---TLP-- 180 G NAP IA E+ YE+ WAADVAAM GYH GAS AAA L GLQQ L+ LP Sbjct 121 FGQNAPAIALAEAQYEQMWAADVAAMVGYHGGASAAAAHLQSWQRGLQQALSGVLGLPAS 180 Query 181 ----------------------------------NLGIGNQGNANLGGGNTGSGNIGNGN 206 LG GN G++NLG GN G+ N+G+GN Sbjct 181 AAAAAAQNPAAGSAAAGAAAGAAAATPVGNNGNLQLGGGNTGDSNLGSGNIGNANLGSGN 240 Query 207 KGSSNLGGGNIGNNNIGSGNRGSDNFGAGNVGTGNIGFGNQGPIDVNLLATPGQNNVGLG 266 G++NLGGGNIGN N+GSGN+G+ N G GN G+ N G GN G + G N G Sbjct 241 TGNANLGGGNIGNANLGSGNKGNINVGNGNFGSANFGDGNIG------IRNAGAGNNGTA 294 Query 267 NIGNNNMGF-------------------------GNTGDANTGGGNTGNGNIGGGNTGNN 301 N+G N G GN G N G GN GN N+G GN G+N Sbjct 295 NMGAGNFGTGNFGFGNIGNGNFGGGNIGPGNVGDGNNGSTNLGSGNLGNFNLGSGNLGSN 354 Query 302 NFGFGNTGNNNIGIGLTGNNQMGINLAGLLNSGSGNIGIGNSGTNNIGLFNSGSGNIGVF 361 N GFGN GNNN+G GLTGNNQ+GI G LNSG+ NIG GNSG NNIG FNSG+ N+G F Sbjct 355 NVGFGNHGNNNVGFGLTGNNQVGI---GGLNSGNNNIGFGNSGDNNIGFFNSGNNNVGFF 411 Query 362 NTGANTLVPGD----------------------LNNLGVGNSGNANIGFGNAGVLNTGFG 399 N+G + G+ N G GN+G+ N GFGNAG LN G+G Sbjct 412 NSGNGNVGFGNSGATNGGFWNAGGGNTGFGNAGFTNTGFGNAGDTNTGFGNAGRLNAGYG 471 Query 400 NASILNTGLGNAGELNTGFGNAGFVNTGFDNSGNVNTGNGNSGNINTGSWNAGNVNTGFG 459 NA ILN G GNAG +N GFGNAG NTG++NSG VNTG GN+G NTG N+GN+NTGF Sbjct 472 NAGILNAGYGNAGNVNAGFGNAGIQNTGWENSGTVNTGFGNAGMTNTGWGNSGNINTGF- 530 Query 460 IITDSGLT-----------NSGFGNTGTDVSGFFNTPTGPLAVDVSGFFNTASGGTVING 508 + + L+ NSGFG+TG + SGFFNT TG SGFFN GG Sbjct 531 -LNSTNLSTGVGNLGSVGPNSGFGHTGANNSGFFNTSTGGFN---SGFFNAGVGGVNSGI 586 Query 509 QTSGIGNIGVPGTLFGSVRSGLNTGLFNMGTAIS 542 SG N+G+ + F +V G NTG N G A S Sbjct 587 NNSGASNVGINNSGFANVGIG-NTGARNAGIANS 619 Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 116/297 (40%), Positives = 149/297 (51%), Gaps = 50/297 (16%) Query 181 NLGIGNQGNANLGGGNTGSGNIGNG--NKGSSNLGGGNIGNNNIGSGNRGSDNFGAGNVG 238 N+G GN GN N+G G TG+ +G G N G++N+G GN G+NNIG N G++N G N G Sbjct 355 NVGFGNHGNNNVGFGLTGNNQVGIGGLNSGNNNIGFGNSGDNNIGFFNSGNNNVGFFNSG 414 Query 239 TGNIGFGNQGPIDVNLLATPGQNNVGLGNIGNNNMGFGNTGDANTGGGNTGNGNIGGGNT 298 GN+GFGN G + G N G GN G N GFGN GD NTG GN G N G GN Sbjct 415 NGNVGFGNSGATNGGFW-NAGGGNTGFGNAGFTNTGFGNAGDTNTGFGNAGRLNAGYGNA 473 Query 299 GNNNFGFGNTGNNNIGIGLTGNNQMGINLAGLLNSGSGNIGI------------------ 340 G N G+GN GN N G G G G +G +N+G GN G+ Sbjct 474 GILNAGYGNAGNVNAGFGNAGIQNTGWENSGTVNTGFGNAGMTNTGWGNSGNINTGFLNS 533 Query 341 -------------------GNSGTNNIGLFNSGSG--NIGVFNTGANTLVPGDLN----N 375 G++G NN G FN+ +G N G FN G + G N N Sbjct 534 TNLSTGVGNLGSVGPNSGFGHTGANNSGFFNTSTGGFNSGFFNAGVGGVNSGINNSGASN 593 Query 376 LGVGNSGNANIGFGNAGVLNTGFGNAS----ILNTGLGNAGELNTGFGNAGFVNTGF 428 +G+ NSG AN+G GN G N G N++ I +G+ N+ L++G N G +GF Sbjct 594 VGINNSGFANVGIGNTGARNAGIANSAPNIVIGTSGVANSATLSSGGFNTGTSLSGF 650 >gi|240173028|ref|ZP_04751686.1| PPE family protein [Mycobacterium kansasii ATCC 12478] Length=591 Score = 378 bits (970), Expect = 1e-102, Method: Compositional matrix adjust. Identities = 289/535 (55%), Positives = 349/535 (66%), Gaps = 57/535 (10%) Query 3 HFSVLPPEINSLRMYLGAGSAPMLQAAAAWDGLAAELGTAASSFSSVTTGLTGQAWQGPA 62 +F +LPPEINS R+YLGAGS PML AAAAWDGLA ELG+AA SF SVT+GLTG WQGPA Sbjct 5 NFVILPPEINSARVYLGAGSGPMLAAAAAWDGLAGELGSAAGSFGSVTSGLTGAVWQGPA 64 Query 63 SAAMAAAAAPYAGFLTTASAQAQLAAGQAKAVASVFEAAKAAIVPPAAVAANREAFLALI 122 + AM AAAPY G+L+ A+A AQ AAGQA+ S FEAA AA V P AVAANR ++L+ Sbjct 65 ATAMVEAAAPYVGWLSAAAAHAQGAAGQARTAVSAFEAAVAATVHPVAVAANRNQLVSLV 124 Query 123 RSNWLGLNAPWIAAVESLYEEYWAADVAAMTGYHAGASQAAAQL-PLPAGLQQFLNTLP- 180 SN G NAP IAA E+ YE+ WA DVAAM GYH A+ AQL P+ +GLQQ L TLP Sbjct 125 VSNLFGQNAPAIAAAETAYEQMWAQDVAAMVGYHGEAAAVVAQLAPMQSGLQQALQTLPG 184 Query 181 ---NLGIGNQGNANLGGGNTGSGNIGNGNKGSSNLGGGNIGNNNIGSGNRGSDNFGAGNV 237 NLG+GN G+ NLGGGN G N+G+GN GS N+G GN GN N+G+GN G+ N G GN Sbjct 185 MLANLGVGNAGSGNLGGGNHGDNNLGSGNNGSHNVGSGNAGNTNLGNGNSGNSNVGNGNR 244 Query 238 GTGNIGFGNQGPIDVNLLATPGQNNVGLGNIGNNNMGF--------------------GN 277 G N G GN G N G GNIG N+G GN Sbjct 245 GDQNFGSGNSGGT-----------NTGNGNIGTGNVGSGNLGNGNLGNGNLGNSNVGSGN 293 Query 278 TGDANTGGGNTGNGNIGGGNTGNNNFGFGNTGNNNIGIGLTGNNQMGINLAGLLNSGSGN 337 GD N G GN G+ NIG NTGN++FGFGNTGNN+IG GLTG+NQ+G G LNSGSGN Sbjct 294 RGDNNMGFGNRGSSNIGVSNTGNHDFGFGNTGNNDIGFGLTGDNQVGF---GALNSGSGN 350 Query 338 IGIGNSGTNNIGLFNSGSGNIGVFNTGANTLVPGDLN--NLGVGNSGNANIGFGNAGVLN 395 IG GNSG+ N+G FNSG+GN+G+FN+G ++ + N G+ NSG N GF NAG + Sbjct 351 IGFGNSGSGNVGFFNSGTGNVGLFNSGGHSFGAENSGSFNTGLTNSGQGNTGFVNAGFNS 410 Query 396 TGFGNASILNTGLGNAGELNTGFGNAGFVNTGFDNSGNVNTGNGNSGNI----------N 445 G NA N G+ N G N GFGN+GF NTG N+G++NTG+ N+G+I N Sbjct 411 LGLANAGANNMGVFNGGSQNFGFGNSGFQNTGSWNAGSINTGDFNAGSINTGWANSGASN 470 Query 446 TGSWNAGNVNTGFG-IITDSGLTNSGFGNTGTDVSGFFNTPTGPLAVDVSGFFNT 499 TG +++G++NTGFG ++T G NSGFG TG D SGFFN+ D SGF NT Sbjct 471 TGGFDSGSLNTGFGSMLTPVGAKNSGFGTTGLDSSGFFNS-----GGDTSGFQNT 520 Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust. Identities = 67/184 (37%), Positives = 90/184 (49%), Gaps = 14/184 (7%) Query 181 NLGIGNQGNANLGGGNTGSGNIGNGNKGSSNLGGGNIGNNNIGSGNRGSDNFGAGNVGTG 240 N+G+ N G+ N G GN+G N G+ N GS N G N G+ N G N G+ N G + G+ Sbjct 420 NMGVFNGGSQNFGFGNSGFQNTGSWNAGSINTGDFNAGSINTGWANSGASNTGGFDSGSL 479 Query 241 NIGFGNQGPIDVNLLATPGQNNVGLGNIGNNNMGFGNTGDANTGGGNTGNGNIGGGNTGN 300 N GFG+ +L G N G G G ++ GF N+G +G NTG G + Sbjct 480 NTGFGS-------MLTPVGAKNSGFGTTGLDSSGFFNSGGDTSGFQNTGLAFESGFHNSG 532 Query 301 NNFGFGNTGNNNI--GIGLTGNNQMGINLAGLLNSGSGNIGIGNSGTNNIGLFNSGSGNI 358 N G + GIG TG + +GI + + NS GIGNSG ++ G FN Sbjct 533 NGNNAGINNTGSFLAGIGNTGFDNIGIANSNVFNS-----GIGNSGNDDSGFFNKTDAQS 587 Query 359 GVFN 362 G FN Sbjct 588 GFFN 591 >gi|240171043|ref|ZP_04749702.1| PPE family protein [Mycobacterium kansasii ATCC 12478] Length=600 Score = 369 bits (947), Expect = 8e-100, Method: Compositional matrix adjust. Identities = 307/593 (52%), Positives = 368/593 (63%), Gaps = 63/593 (10%) Query 3 HFSVLPPEINSLRMYLGAGSAPMLQAAAAWDGLAAELGTAASSFSSVTTGLTGQAWQGPA 62 +FS+LPPE+NS R++ GAG+APML AAAAWD LA EL AASSF SVT L GQ+W GPA Sbjct 2 NFSMLPPELNSARIFAGAGTAPMLSAAAAWDRLANELSAAASSFGSVTAELAGQSWHGPA 61 Query 63 SAAMAAAAAPYAGFLTTASAQAQLAAGQAKAVASVFEAAKAAIVPPAAVAANREAFLALI 122 +AAMAAAA PY +LTTA+ A AAG+ + A+ +EAA+AA V P VAANR ++L+ Sbjct 62 AAAMAAAATPYTAWLTTAATAAAEAAGRGRIAAAGYEAARAATVHPMLVAANRSRLVSLV 121 Query 123 RSNWLGLNAPWIAAVESLYEEYWAADVAAMTGYHAGASQAAAQLPLPAGLQQFLNTLPNL 182 SN G NAP IAA+E+ YE+ WA D AAM+GYHA AS AAQLP NL Sbjct 122 WSNVFGQNAPAIAAIEACYEQMWAQDAAAMSGYHALASAVAAQLP-----------QINL 170 Query 183 GIGNQGNANLGGGNTGSGNIGNGNKGSSNLGGGNIGNNNIGSGNRGSDNFGAG------- 235 G+GN G+ N+G GNTG N+G+GN G++NLG GN GN N+GSGN G+ N G+G Sbjct 171 GLGNIGSLNMGSGNTGDFNLGSGNIGNTNLGSGNFGNTNLGSGNFGNSNLGSGNGNFLDA 230 Query 236 -----NVGTG-----NIGFGNQGPIDVNLLATPGQNNVGLGNIGN-----NNMGFGNTGD 280 NVG+G N+GFGN G A G N+G N GN N+G GN G+ Sbjct 231 VQANFNVGSGNNGSYNVGFGNSGAGSSAGNANVGNGNLGSQNFGNGNNGSQNVGSGNNGN 290 Query 281 ANTGGGNTGNGNIGGGNTGNNNFGFGNTGNNNIGIGLTGNNQMGINLAGLLNSGSGNIGI 340 NTG GNTG+ N G GN+GNNN GFGNTGN NIGIGLTG++Q GINL G LNSGSGNIG+ Sbjct 291 VNTGYGNTGDRNWGLGNSGNNNIGFGNTGNGNIGIGLTGDDQRGINLTGWLNSGSGNIGL 350 Query 341 GNSGTNNIGLFNSGSGNIGVFNTG------ANT-------LVPGDLN----NLGVGNSGN 383 NSGT NIG FNSGSGN+G+ N+G AN+ GD N N G G G Sbjct 351 FNSGTGNIGFFNSGSGNVGIANSGLSNYGIANSGQVDTGLWNSGDTNTGIANSGSGAFGG 410 Query 384 ANIGFGNAGVLNTGFGNASILNTGLGNAGELNTGFGNAGFVNTGFDNSGNVNTGNGNSGN 443 N GFGN G NTGF N N G N+G NTG N+GF+NTG+ NSG +NTG NSG Sbjct 411 VNTGFGNGGYHNTGFANGGSFNAGSFNSGNHNTGGFNSGFINTGYFNSGPLNTGLANSGG 470 Query 444 INTGSWNAGNVNTGFGIITDSGLTNSGFGNTGTDVSGFFNTPTGP--------LAVDVSG 495 INTG +NAG +NTG G D +SGFGN+G SGFFN L +D SG Sbjct 471 INTGLFNAGELNTGLGSSADQPGPSSGFGNSGAGSSGFFNDGVNSSGIGNVSGLGLD-SG 529 Query 496 FFNTASGGTVINGQTSGIGNIGVPGTLFGSVRSGLNTGLFNMGT--AISGLFN 546 F+N GG +G G GV G F S L++G FN G + SGL N Sbjct 530 FWNRGGGGRATGFFNAGAG-FGVTG-FFNSGSGALSSGFFNSGDTGSNSGLHN 580 Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust. Identities = 79/218 (37%), Positives = 102/218 (47%), Gaps = 42/218 (19%) Query 181 NLGIGNQGNANLGGGNTGSG-----NIGNGNKGSSNLGGGNIGNNNIGSGNRGSDNFGAG 235 + G+ N G+ N G N+GSG N G GN G N G N G+ N GS N G+ N G Sbjct 387 DTGLWNSGDTNTGIANSGSGAFGGVNTGFGNGGYHNTGFANGGSFNAGSFNSGNHNTGGF 446 Query 236 NVGTGNIGFGNQGPIDVNLLATPGQNNVGLGNIGNNNMGFGNTGDA---NTGGGNTGNGN 292 N G N G+ N GP++ L A G N GL N G N G G++ D ++G GN+G G+ Sbjct 447 NSGFINTGYFNSGPLNTGL-ANSGGINTGLFNAGELNTGLGSSADQPGPSSGFGNSGAGS 505 Query 293 IGGGNTGNNNFGFGNTGNNNIGIGLTG---------------NNQMGINLAGLLNSGSG- 336 G N G N+ G GN G+GL N G + G NSGSG Sbjct 506 SGFFNDGVNSSGIGNV----SGLGLDSGFWNRGGGGRATGFFNAGAGFGVTGFFNSGSGA 561 Query 337 -------------NIGIGNSGTNNIGLFNSGSGNIGVF 361 N G+ N+G N+ G FN+G+G G F Sbjct 562 LSSGFFNSGDTGSNSGLHNTGGNSSGGFNTGTGQSGFF 599 >gi|306778415|ref|ZP_07416752.1| PPE family protein [Mycobacterium tuberculosis SUMu002] gi|308328515|gb|EFP17366.1| PPE family protein [Mycobacterium tuberculosis SUMu002] Length=581 Score = 366 bits (939), Expect = 6e-99, Method: Compositional matrix adjust. Identities = 327/608 (54%), Positives = 379/608 (63%), Gaps = 102/608 (16%) Query 3 HFSVLPPEINSLRMYLGAGSAPMLQAAAAWDGLAAELGTAASSFSSVTTGLTGQAWQGPA 62 +++VLPPE+NSLRM+ GAGSAPML AA AWDGLAAELG+AASSF SVT+ L QAWQGPA Sbjct 2 NYAVLPPELNSLRMFTGAGSAPMLAAAVAWDGLAAELGSAASSFGSVTSDLASQAWQGPA 61 Query 63 SAAMAAAAAPYAGFLTTASAQAQLAAGQAKAVASVFEAAKAAIVPPAAVAANREAFLALI 122 +A AAAA YAG+L+ A+A+A AA QAKAVAS FEAA+AA V P VAANR AF L+ Sbjct 62 AAMAAAAAP-YAGWLSAAAARAAGAAAQAKAVASAFEAARAATVHPLLVAANRNAFAQLV 120 Query 123 RSNWLGLNAPWIAAVESLYEEYWAADVAAMTGYHAGASQAAAQLPLPAGLQQFLNTLPNL 182 SNW GLNAP IAAVE YE+ WAADVAAM GYH+GAS AA QL +P QQ L LPNL Sbjct 121 MSNWFGLNAPLIAAVEGAYEQMWAADVAAMVGYHSGASAAAEQL-VP--FQQALQQLPNL 177 Query 183 GIGNQGNANLGGGNTGSGNIGNGNKGSSNLGGGNIGNNNIGS------------------ 224 GIGN GNANLGGGNTG N GNGN G++NLG GN G+ N+GS Sbjct 178 GIGNIGNANLGGGNTGDLNTGNGNIGNTNLGSGNRGDANLGSGNIGNSNVGGGNVGNGNF 237 Query 225 -----------------GNRGSDNFGAGNVGTGNIGFGNQGPIDVNLLATPGQNNVGLGN 267 GN G+ N G+GN G N+GFGN G NNVG GN Sbjct 238 GSGNGRAGLPGSGNVGNGNLGNSNLGSGNTGNSNVGFGN-----------TGNNNVGTGN 286 Query 268 IGNNNMGFGNTGDANTGGGNTGNGNIGGGNTGNNNFGFGNTGNNNIGIGLTGNNQMGINL 327 G+ N+G GNTG +N G GN G GNI GFGNTGN NIG GLTGNNQ+GI Sbjct 287 AGSGNIGAGNTGSSNWGFGNNGIGNI----------GFGNTGNGNIGFGLTGNNQVGI-- 334 Query 328 AGLLNSGSGNIGIGNSGTNNIGLFNSGSGNIGVFNTGANTLVPGDL----------NNLG 377 G LNSGSGNIG+ NSGTNN+G FNSG+GN+G+ N+ + G+ +N G Sbjct 335 -GGLNSGSGNIGLFNSGTNNVGFFNSGNGNLGIGNSSDANVGIGNSGATVGPFVAGHNTG 393 Query 378 VGNSGNANIGFGNAGVLNTGFGNASILNTGLGNAGELNTGFGNAGFVNTGFDNSGNVNTG 437 GNSG+ N G GNAG +NTGFGN +N G GN+G+LN G NAG +NTG NSG NTG Sbjct 394 FGNSGSLNTGMGNAGGVNTGFGNGGAINLGFGNSGQLNAGSFNAGSINTGNFNSGQGNTG 453 Query 438 N----------GNSGNINTGSWNAGNVNTGFGIITDSGLTNSGFGNTGTDVSGFFNTPTG 487 + NSG NTG++NAG++NTGFG + NSGFGN GT+ SGFFNT G Sbjct 454 DFNAGVRNTGWSNSGLTNTGAFNAGSLNTGFGAVGTGSGPNSGFGNAGTNNSGFFNTGVG 513 Query 488 PLAVDVSGFFNTASG--------GTVINGQTSGIGNIGVPGTLFGSVRSG-LNTGLFNMG 538 SGF N S GTVI +G GN G G SG LN+G FN G Sbjct 514 S-----SGFQNGGSNNSGLQNAVGTVI---AAGFGNTGAQ--TVGIANSGVLNSGFFNSG 563 Query 539 TAISGLFN 546 SG FN Sbjct 564 VHNSGGFN 571 Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 137/320 (43%), Positives = 172/320 (54%), Gaps = 55/320 (17%) Query 188 GNANLGGGNTGSGNIGNGNKGSSNLGGGNIGNNNIGSGNRGSDNFGAGNVGTGNIGFGNQ 247 GN+N+G GNTG+ N+G GN GS N+G GN G++N G GN G N G GN G GNIGFG Sbjct 268 GNSNVGFGNTGNNNVGTGNAGSGNIGAGNTGSSNWGFGNNGIGNIGFGNTGNGNIGFGLT 327 Query 248 GPIDVNLLA-TPGQNNVGLGNIGNNNMGFGNTGDANTGGGNTGNGNIGGGNTG------- 299 G V + G N+GL N G NN+GF N+G+ N G GN+ + N+G GN+G Sbjct 328 GNNQVGIGGLNSGSGNIGLFNSGTNNVGFFNSGNGNLGIGNSSDANVGIGNSGATVGPFV 387 Query 300 -NNNFGFGNTGNNNIGIGLTGNNQMGINLAGLLNSGSGNIGIGNSGTNNIGLFNSGSGNI 358 +N GFGN+G+ N G+G N G+N G N G+ N+G GNSG N G FN+GS N Sbjct 388 AGHNTGFGNSGSLNTGMG----NAGGVN-TGFGNGGAINLGFGNSGQLNAGSFNAGSINT 442 Query 359 GVFNTGANTLVPGDLN----NLGVGNSGNANIGFGNAGVLNTGFG--------------- 399 G FN+G GD N N G NSG N G NAG LNTGFG Sbjct 443 GNFNSGQGN--TGDFNAGVRNTGWSNSGLTNTGAFNAGSLNTGFGAVGTGSGPNSGFGNA 500 Query 400 ---NASILNTGLGNAGELN-----------------TGFGNAGFVNTGFDNSGNVNTGNG 439 N+ NTG+G++G N GFGN G G NSG +N+G Sbjct 501 GTNNSGFFNTGVGSSGFQNGGSNNSGLQNAVGTVIAAGFGNTGAQTVGIANSGVLNSGFF 560 Query 440 NSGNINTGSWNAGNVNTGFG 459 NSG N+G +N+ N +GFG Sbjct 561 NSGVHNSGGFNSENQRSGFG 580 Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust. Identities = 85/210 (41%), Positives = 99/210 (48%), Gaps = 37/210 (17%) Query 181 NLGIGNQGNANLGGGNTGS--------GNIGNGNKGSSNLGGGNIGNNNIGSGNRGSDNF 232 NLGIGN +AN+G GN+G+ N G GN GS N G GN G N G GN G+ N Sbjct 363 NLGIGNSSDANVGIGNSGATVGPFVAGHNTGFGNSGSLNTGMGNAGGVNTGFGNGGAINL 422 Query 233 GAGNVGTGNIGFGNQGPIDVNLLAT----PGQNNVGLGNIGNNNMGFGNTGDANTGGGNT 288 G GN G N G N G I+ + G N G+ N G +N G NTG N G NT Sbjct 423 GFGNSGQLNAGSFNAGSINTGNFNSGQGNTGDFNAGVRNTGWSNSGLTNTGAFNAGSLNT 482 Query 289 GNG--------NIGGGNTGNNNFGFGNTGNNNIGIGLTGNNQMGINLA------------ 328 G G N G GN G NN GF NTG + G G+N G+ A Sbjct 483 GFGAVGTGSGPNSGFGNAGTNNSGFFNTGVGSSGFQNGGSNNSGLQNAVGTVIAAGFGNT 542 Query 329 -----GLLNSGSGNIGIGNSGTNNIGLFNS 353 G+ NSG N G NSG +N G FNS Sbjct 543 GAQTVGIANSGVLNSGFFNSGVHNSGGFNS 572 >gi|289763711|ref|ZP_06523089.1| PPE family protein [Mycobacterium tuberculosis GM 1503] gi|289711217|gb|EFD75233.1| PPE family protein [Mycobacterium tuberculosis GM 1503] Length=581 Score = 366 bits (939), Expect = 6e-99, Method: Compositional matrix adjust. Identities = 329/608 (55%), Positives = 381/608 (63%), Gaps = 102/608 (16%) Query 3 HFSVLPPEINSLRMYLGAGSAPMLQAAAAWDGLAAELGTAASSFSSVTTGLTGQAWQGPA 62 +++VLPPE+NSLRM+ GAGSAPML AA AWDGLAAELG+AASSF SVT+ L QAWQGPA Sbjct 2 NYAVLPPELNSLRMFTGAGSAPMLAAAVAWDGLAAELGSAASSFGSVTSDLASQAWQGPA 61 Query 63 SAAMAAAAAPYAGFLTTASAQAQLAAGQAKAVASVFEAAKAAIVPPAAVAANREAFLALI 122 +AAMAAAA YAG+L+ A+A+A AA QAKAVAS FEAA+AA V P VAANR AF L+ Sbjct 62 AAAMAAAAP-YAGWLSAAAARAAGAAAQAKAVASAFEAARAATVHPLLVAANRNAFAQLV 120 Query 123 RSNWLGLNAPWIAAVESLYEEYWAADVAAMTGYHAGASQAAAQLPLPAGLQQFLNTLPNL 182 SNW GLNAP IAAVE YE+ WAADVAAM GYH+GAS AA QL +P QQ L LPNL Sbjct 121 MSNWFGLNAPLIAAVEGAYEQMWAADVAAMVGYHSGASAAAEQL-VP--FQQALQQLPNL 177 Query 183 GIGNQGNANLGGGNTGSGNIGNGNKGSSNLGGGNIGNNNIGS------------------ 224 GIGN GNANLGGGNTG N GNGN G++NLG GN G+ N+GS Sbjct 178 GIGNIGNANLGGGNTGDLNTGNGNIGNTNLGSGNRGDANLGSGNIGNSNVGGGNVGNGNF 237 Query 225 -----------------GNRGSDNFGAGNVGTGNIGFGNQGPIDVNLLATPGQNNVGLGN 267 GN G+ N G+GN G N+GFGN G NNVG GN Sbjct 238 GSGNGRAGLPGSGNVGNGNLGNSNLGSGNTGNSNVGFGN-----------TGNNNVGTGN 286 Query 268 IGNNNMGFGNTGDANTGGGNTGNGNIGGGNTGNNNFGFGNTGNNNIGIGLTGNNQMGINL 327 G+ N+G GNTG +N G GN G GNI GFGNTGN NIG GLTGNNQ+GI Sbjct 287 AGSGNIGAGNTGSSNWGFGNNGIGNI----------GFGNTGNGNIGFGLTGNNQVGI-- 334 Query 328 AGLLNSGSGNIGIGNSGTNNIGLFNSGSGNIGVFNTGANTLVPGDL----------NNLG 377 G LNSGSGNIG+ NSGTNN+G FNSG+GN+G+ N+ + G+ +N G Sbjct 335 -GGLNSGSGNIGLFNSGTNNVGFFNSGNGNLGIGNSSDANVGIGNSGATVGPFVAGHNTG 393 Query 378 VGNSGNANIGFGNAGVLNTGFGNASILNTGLGNAGELNTGFGNAGFVNTGFDNSGNVNTG 437 GNSG+ N G GNAG +NTGFGN +N G GN+G+LN G NAG +NTG NSG NTG Sbjct 394 FGNSGSLNTGMGNAGGVNTGFGNGGAINLGFGNSGQLNAGSFNAGSINTGNFNSGQGNTG 453 Query 438 N----------GNSGNINTGSWNAGNVNTGFGIITDSGLTNSGFGNTGTDVSGFFNTPTG 487 + NSG NTG++NAG++NTGFG + NSGFGN GT+ SGFFNT G Sbjct 454 DFNAGVRNTGWSNSGLTNTGAFNAGSLNTGFGAVGTGSGPNSGFGNAGTNNSGFFNTGVG 513 Query 488 PLAVDVSGFFNTASG--------GTVINGQTSGIGNIGVPGTLFGSVRSG-LNTGLFNMG 538 SGF N S GTVI +G GN G G SG LN+G FN G Sbjct 514 S-----SGFQNGGSNNSGLQNAVGTVI---AAGFGNTGAQ--TVGIANSGVLNSGFFNSG 563 Query 539 TAISGLFN 546 SG FN Sbjct 564 VHNSGGFN 571 Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 137/320 (43%), Positives = 172/320 (54%), Gaps = 55/320 (17%) Query 188 GNANLGGGNTGSGNIGNGNKGSSNLGGGNIGNNNIGSGNRGSDNFGAGNVGTGNIGFGNQ 247 GN+N+G GNTG+ N+G GN GS N+G GN G++N G GN G N G GN G GNIGFG Sbjct 268 GNSNVGFGNTGNNNVGTGNAGSGNIGAGNTGSSNWGFGNNGIGNIGFGNTGNGNIGFGLT 327 Query 248 GPIDVNLLA-TPGQNNVGLGNIGNNNMGFGNTGDANTGGGNTGNGNIGGGNTG------- 299 G V + G N+GL N G NN+GF N+G+ N G GN+ + N+G GN+G Sbjct 328 GNNQVGIGGLNSGSGNIGLFNSGTNNVGFFNSGNGNLGIGNSSDANVGIGNSGATVGPFV 387 Query 300 -NNNFGFGNTGNNNIGIGLTGNNQMGINLAGLLNSGSGNIGIGNSGTNNIGLFNSGSGNI 358 +N GFGN+G+ N G+G N G+N G N G+ N+G GNSG N G FN+GS N Sbjct 388 AGHNTGFGNSGSLNTGMG----NAGGVN-TGFGNGGAINLGFGNSGQLNAGSFNAGSINT 442 Query 359 GVFNTGANTLVPGDLN----NLGVGNSGNANIGFGNAGVLNTGFG--------------- 399 G FN+G GD N N G NSG N G NAG LNTGFG Sbjct 443 GNFNSGQGN--TGDFNAGVRNTGWSNSGLTNTGAFNAGSLNTGFGAVGTGSGPNSGFGNA 500 Query 400 ---NASILNTGLGNAGELN-----------------TGFGNAGFVNTGFDNSGNVNTGNG 439 N+ NTG+G++G N GFGN G G NSG +N+G Sbjct 501 GTNNSGFFNTGVGSSGFQNGGSNNSGLQNAVGTVIAAGFGNTGAQTVGIANSGVLNSGFF 560 Query 440 NSGNINTGSWNAGNVNTGFG 459 NSG N+G +N+ N +GFG Sbjct 561 NSGVHNSGGFNSENQRSGFG 580 Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust. Identities = 85/210 (41%), Positives = 99/210 (48%), Gaps = 37/210 (17%) Query 181 NLGIGNQGNANLGGGNTGS--------GNIGNGNKGSSNLGGGNIGNNNIGSGNRGSDNF 232 NLGIGN +AN+G GN+G+ N G GN GS N G GN G N G GN G+ N Sbjct 363 NLGIGNSSDANVGIGNSGATVGPFVAGHNTGFGNSGSLNTGMGNAGGVNTGFGNGGAINL 422 Query 233 GAGNVGTGNIGFGNQGPIDVNLLAT----PGQNNVGLGNIGNNNMGFGNTGDANTGGGNT 288 G GN G N G N G I+ + G N G+ N G +N G NTG N G NT Sbjct 423 GFGNSGQLNAGSFNAGSINTGNFNSGQGNTGDFNAGVRNTGWSNSGLTNTGAFNAGSLNT 482 Query 289 GNG--------NIGGGNTGNNNFGFGNTGNNNIGIGLTGNNQMGINLA------------ 328 G G N G GN G NN GF NTG + G G+N G+ A Sbjct 483 GFGAVGTGSGPNSGFGNAGTNNSGFFNTGVGSSGFQNGGSNNSGLQNAVGTVIAAGFGNT 542 Query 329 -----GLLNSGSGNIGIGNSGTNNIGLFNS 353 G+ NSG N G NSG +N G FNS Sbjct 543 GAQTVGIANSGVLNSGFFNSGVHNSGGFNS 572 >gi|183981566|ref|YP_001849857.1| PPE family protein [Mycobacterium marinum M] gi|183174892|gb|ACC40002.1| PPE family protein [Mycobacterium marinum M] Length=679 Score = 366 bits (939), Expect = 7e-99, Method: Compositional matrix adjust. Identities = 308/605 (51%), Positives = 365/605 (61%), Gaps = 94/605 (15%) Query 3 HFSVLPPEINSLRMYLGAGSAPMLQAAAAWDGLAAELGTAASSFSSVTTGLTGQAWQGPA 62 +FSVLPPEINSLR++ G GS PML AAAAWDGLA EL TAA++FSSVT+GLTG +WQGPA Sbjct 2 NFSVLPPEINSLRIFAGTGSGPMLAAAAAWDGLADELSTAAAAFSSVTSGLTGGSWQGPA 61 Query 63 SAAMAAAAAPYAGFLTTASAQAQLAAGQAKAVASVFEAAKAAIVPPAAVAANREAFLALI 122 +AAMAAAAAPYAG+L A+A+A + QAK VA+ FEA +AA V P VAANR ++L+ Sbjct 62 AAAMAAAAAPYAGWLGLAAARAGDVSAQAKVVAAAFEAVRAATVHPMLVAANRAQLVSLV 121 Query 123 RSNWLGLNAPWIAAVESLYEEYWAADVAAMTGYHAGA----------SQAAAQLP-LPAG 171 RSN LGLNAP IA E+ YE WAADVAAM GYH GA Q LP LP Sbjct 122 RSNLLGLNAPAIATTEAEYEAMWAADVAAMVGYHGGASAAAAQLAPWQQWLQSLPGLPGQ 181 Query 172 L------QQFLNTLPNLGI-------------------GNQGNANLGGGNTGSGNIGNGN 206 L N PNLGI GN GN NLG GNTG+GN+G+GN Sbjct 182 LAGSATAAAAANGWPNLGIGNTDSNVGSGDVGTQNLGSGNTGNTNLGSGNTGNGNLGSGN 241 Query 207 KGSSNLGGGNIGNNNIGSGNRGSDNFGAGNVGTGNIGFGNQGPIDVNLLATPGQN----- 261 +G SN+G GN+GN+N GSGN G+ N G+GN G N+GFGN G L T G + Sbjct 242 RGDSNVGSGNLGNSNWGSGNTGNYNQGSGNHGDNNVGFGNAG-----LGGTAGNDNFGNG 296 Query 262 -----NVGLGNIGNNNMGFGNTGDANTGGGNTGNGNIGGGNTGNNNFGFGNTGNNNIGIG 316 N G GNIGN N G+GN GD N G N G+ N+G GNTGNNN GFGNTG+ NIGIG Sbjct 297 NLGSGNTGSGNIGNQNQGWGNQGDNNVGLANRGSDNMGFGNTGNNNVGFGNTGSGNIGIG 356 Query 317 LTGNNQMGINLAGLLNSGSGNIGIGNSGTNNIGLFNSGSGNIGVFNTGANTLVPGD--LN 374 LTGNNQMG G LNSGSGN+G GNSGT N+G FNSG GN G+ N+GA G+ Sbjct 357 LTGNNQMGF---GGLNSGSGNLGFGNSGTGNVGFFNSGVGNWGIGNSGAIDTGFGNSGFI 413 Query 375 NLGVGNSGNANIGFGNAGV-----LNTGFGNASILNTGLGNAGELNTG-----------F 418 + G+GNSG N G GN+G+ N GFGN+ I N G+GN+G N G F Sbjct 414 DTGIGNSGALNTGIGNSGLNAGSGFNVGFGNSGINNFGVGNSGSFNAGSFNSSTSNLGSF 473 Query 419 GNAGFV--------------NTGFDNSGNVNTGNGNSGNINTGSWNAGNVNTGFGIITDS 464 + FV NTG N+G NTG N+G+INTG WN+G++NTG G Sbjct 474 NSGNFVLGGFNVGSFNSGAHNTGAFNAGGYNTGFWNAGDINTGMWNSGDLNTGLGSAITQ 533 Query 465 GLTNSGFGNTGTDVSGFFNTPTGPLAVDVSGFFNTASGGTVINGQTSGIGNIGVPGTLFG 524 + NSGF N G+ SG FN +G SGF N SG G SG N+G G+ G Sbjct 534 TVANSGFFNAGSTSSGLFNVGSGG---HNSGFVNVGSG-----GYNSGFFNLGAGGSNAG 585 Query 525 SVRSG 529 SG Sbjct 586 FFNSG 590 >gi|183984524|ref|YP_001852815.1| PPE family protein [Mycobacterium marinum M] gi|183177850|gb|ACC42960.1| PPE family protein [Mycobacterium marinum M] Length=668 Score = 365 bits (938), Expect = 8e-99, Method: Compositional matrix adjust. Identities = 337/624 (55%), Positives = 382/624 (62%), Gaps = 90/624 (14%) Query 3 HFSVLPPEINSLRMYLGAGSAPMLQAAAAWDGLAAELGTAASSFSSVTTGLTGQAWQGPA 62 +FS+ PPEINSLRM+ GAGSAPMLQAAAAW+GLA ELG+AA SF+SVT+GL GQAWQGPA Sbjct 2 NFSIFPPEINSLRMFTGAGSAPMLQAAAAWEGLAGELGSAADSFASVTSGLVGQAWQGPA 61 Query 63 SAAMAAAAAPYAGFLTTASAQAQLAAGQAKAVASVFEAAKAAIVPPAAVAANREAFLALI 122 SAAMAAA APY +L+ A+AQA AAG AK VAS FEAA+AA V PAAVAANR A + ++ Sbjct 62 SAAMAAAVAPYTSWLSAAAAQAVGAAGAAKMVASAFEAARAATVLPAAVAANRNALVQMV 121 Query 123 RSNWLGLNAPWIAAVESLYEEYWAADVAAMTGYHAGASQAAAQL-PLPAGLQQFLNTLPN 181 SN G NAP IAA E+ YEE WA DVAAM GYH+GAS AA L P LQ P Sbjct 122 MSNIFGQNAPAIAAAEAAYEEMWAQDVAAMFGYHSGASAVAAALSPWEQLLQNVPALSPL 181 Query 182 LGIGNQGNANLGGGNTGSGNIGNGNKGSSNLGGGNIGNNNIGSGNR-------------- 227 IGN G NLG GNTG N+GNGN G+ N GGGNIGN N GSGNR Sbjct 182 AAIGNLGAGNLGFGNTGIANLGNGNTGNLNFGGGNIGNFNFGSGNRGGNVNFGNGNNGFF 241 Query 228 -------GSDNFGAGNVGTGNIGFGN-QGPIDVNLLATP--------------------- 258 GS+NFG+GN G GNIGFGN Q N+ Sbjct 242 NLGGGNIGSNNFGSGNRGNGNIGFGNYQSTGGANIGGGNSGSGNKGFGNTGNYNIGSGNF 301 Query 259 GQNNVGLGNIGNNNMGFGNTGDANTGGGNTGNGNIGGGNTGNNNFGFGNTGNNNIGIGLT 318 G N G GN G+NN GFGNT N G GN G N+G GN G+ N GFGNTGNNN GIGL+ Sbjct 302 GSFNFGDGNRGSNNFGFGNTNSGNVGFGNLGANNVGFGNLGSGNVGFGNTGNNNFGIGLS 361 Query 319 GNNQMGINLAGLLNSGSGNIGIGNSGTNNIGLFNSGSGNIGV---------------FNT 363 GN+Q+GIN G LN GSGNIG+ NSG NN+G FNSG GN G+ FNT Sbjct 362 GNDQVGINFNG-LNGGSGNIGLFNSGNNNVGFFNSGDGNWGIGNSGDTNTGIGNSGSFNT 420 Query 364 G---ANTLVPGDLNN----LGVGNS----------GNANIGFGNAGVLNTGFGNASILNT 406 G A +L G N+ LGVGNS G+ N+G GNAG N GFGNA N Sbjct 421 GFVNAASLNTGMANSANTCLGVGNSGAGDVGFMNAGHDNVGLGNAGSFNMGFGNAGSGNV 480 Query 407 GLGNAGELNTGFGNAGFVNTGFDNSGNVNTGNGNSGNINTGSWNAGNVNTGFGIITDSGL 466 G NAG N GFGN+G NTGF NSG+VNTG NSG+ NTG+ N+G VNTGFGI TDSG Sbjct 481 GYENAGGANVGFGNSGSDNTGFLNSGSVNTGFLNSGSTNTGAGNSGEVNTGFGIATDSGA 540 Query 467 TNSGFGNTGTDVSGFFNTPTGPLAVDVSGFFNTASGGTVINGQTSGIGNIGVPGTLFGSV 526 TNSGFGNTG+ SGF N D SGF NT + + G GN+G T F + Sbjct 541 TNSGFGNTGSGNSGFNNDGN-----DNSGFQNTGT-------SSEGFGNVGNNQTGFQNT 588 Query 527 RSGLNTGLFNMGTAISGLFNLRQL 550 G NTG FN GT G+ N L Sbjct 589 -GGTNTGFFNTGTNDVGVGNSANL 611 Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 159/403 (40%), Positives = 195/403 (49%), Gaps = 93/403 (23%) Query 184 IGNQGNANLGGGNTGSGNIGNGNKGSSNLGGGNIGNNNIGSGNRGSDNFGAGNVGTGNIG 243 GN GN N+G GN GS N G+GN+GS+N G GN + N+G GN G++N G GN+G+GN+G Sbjct 288 FGNTGNYNIGSGNFGSFNFGDGNRGSNNFGFGNTNSGNVGFGNLGANNVGFGNLGSGNVG 347 Query 244 FGNQG------------PIDVNL-----------LATPGQNNVGLGNIGNNNMGFGNTGD 280 FGN G + +N L G NNVG N G+ N G GN+GD Sbjct 348 FGNTGNNNFGIGLSGNDQVGINFNGLNGGSGNIGLFNSGNNNVGFFNSGDGNWGIGNSGD 407 Query 281 ANTGGGNTG----------------------------------------NGNIGGGNTGN 300 NTG GN+G + N+G GN G+ Sbjct 408 TNTGIGNSGSFNTGFVNAASLNTGMANSANTCLGVGNSGAGDVGFMNAGHDNVGLGNAGS 467 Query 301 NNFGFGNTGNNNIGIGLTGNNQMGINLAGLLNSGSGNIGIGNSGTNNIGLFNSGS----- 355 N GFGN G+ N+G N G N+ G NSGS N G NSG+ N G NSGS Sbjct 468 FNMGFGNAGSGNVGY----ENAGGANV-GFGNSGSDNTGFLNSGSVNTGFLNSGSTNTGA 522 Query 356 GNIGVFNTGANTLVPGDLNNLGVGNSGNANIGFGNAGVLNTGFGNASILNTGLGNAGELN 415 GN G NTG N G GN+G+ N GF N G N+GF N + G GN G Sbjct 523 GNSGEVNTGFGIATDSGATNSGFGNTGSGNSGFNNDGNDNSGFQNTGTSSEGFGNVGNNQ 582 Query 416 TGFGNAGFVNTGFDNSGNVNTGNGNSGNINTGSWN---AGNVNTGFGIITDSGLTNSGFG 472 TGF N G NTGF N+G + G GNS N+N G WN AGNV + ++G NSGF Sbjct 583 TGFQNTGGTNTGFFNTGTNDVGVGNSANLNIGFWNSTGAGNVG-----VMNTGTDNSGFI 637 Query 473 NTGTDVSGFFNTPTGPLAVDVSGFFNTASGGTVINGQTSGIGN 515 TGT SGF N+ T ++SGG Q SG GN Sbjct 638 QTGTANSGFANSGT------------SSSGGLNKGDQQSGFGN 668 >gi|183981319|ref|YP_001849610.1| PPE family protein [Mycobacterium marinum M] gi|183174645|gb|ACC39755.1| PPE family protein [Mycobacterium marinum M] Length=694 Score = 363 bits (932), Expect = 4e-98, Method: Compositional matrix adjust. Identities = 277/577 (49%), Positives = 344/577 (60%), Gaps = 86/577 (14%) Query 3 HFSVLPPEINSLRMYLGAGSAPMLQAAAAWDGLAAELGTAASSFSSVTTGLTGQAWQGPA 62 +FSV+PPEINS+ M+ GAGS PML AA W L+AEL +AA+ F+S+T+GLTGQ WQG A Sbjct 2 NFSVMPPEINSVLMFAGAGSEPMLLAARGWSELSAELQSAAAGFASLTSGLTGQFWQGAA 61 Query 63 SAAMAAAAAPYAGFLTTASAQAQLAAGQAKAVASVFEAAKAAIVPPAAVAANREAFLALI 122 + AM A YA L+ +AQA + QA VA+VF+AA+AAIV P VAANR ++L+ Sbjct 62 AQAMTGVAQAYAAHLSATAAQAGQVSAQANGVAAVFDAARAAIVHPLQVAANRTQLVSLV 121 Query 123 RSNWLGLNAPWIAAVESLYEEYWAADVAAMTGYHAGASQAAAQL------------PLPA 170 SN G NAP IAAVE+ YEE WA DV+AM+GY+ AS A AQL PLP Sbjct 122 VSNLFGQNAPAIAAVEANYEEMWAQDVSAMSGYYTAASAAVAQLTPWELTSEGIVIPLPD 181 Query 171 GLQQFLNTLP------NLGIGNQGNANLGGGNTGSGNIGNGNKG---------------- 208 + LN P NLGIGN G+ NLG GNTG+GN+G GN G Sbjct 182 HI-GVLNFTPGNIGSLNLGIGNVGDLNLGSGNTGAGNLGLGNFGELNLGSGNGNSGNGDS 240 Query 209 ------SSNLGGGNIGNNNIGSGNRGSDNFGAGNVGTGNIGFGNQGPIDVNL-------- 254 S NLG GN+G+ N+GSGN G N G+GN G N GFGN G D+NL Sbjct 241 TTPLLASFNLGSGNLGDANLGSGNLGMLNLGSGNKGDTNFGFGNIG--DLNLGSGNIGSH 298 Query 255 -------------LATPGQNNVGLGNIGNNNMGFGNTGDANTGGGNTGNGNIGGGNTGNN 301 G +N GLGN G+ N+G GNTG AN G GN G+ N+G GN G++ Sbjct 299 NFGSGNSGSANLGSGNTGNSNFGLGNTGSTNLGSGNTGSANFGSGNLGDANVGWGNLGSH 358 Query 302 NFGFGNTGNNNIGIGLTGNNQMGINLAGLLNSGSGNIGIGNSGTNNIGLFNSGSGNIGVF 361 NFGFGN G+NNIGIGLTG+NQ+GIN G LNSG GNIG+ NSG +N+G FNSG NIG+ Sbjct 359 NFGFGNNGSNNIGIGLTGDNQIGINF-GALNSGHGNIGLFNSGNDNVGFFNSGDKNIGIA 417 Query 362 NTG-------ANTLVPGDLN---------NLGVGNSGNANIGFGNAGVLNTGFGNASILN 405 N+G G+ N N G GNSG+ N G+ NAG NTG N+ + Sbjct 418 NSGLGVGPLSTEFFTSGEFNSGVGSSGTLNTGWGNSGSTNTGYFNAGHTNTGLFNSGDTS 477 Query 406 TGLGNAGELNTGFGNAGFVNTGFDNSGNVNTGNGNSGNINTGSWNAGNVNTGFGIITDSG 465 TGL N+G+ NTG N+G NTGF N+G N G+ N G+ NTG WN+G++NTG+ +SG Sbjct 478 TGLFNSGDTNTGLFNSGDTNTGFFNAGTANFGSFNGGSTNTGDWNSGSINTGY---ANSG 534 Query 466 LTNSGFGNTGTDVSGFFNTPTGPLAVDVSGFFNTASG 502 TN+G N G +G F+ P V SGF N G Sbjct 535 GTNTGILNAGNLNTGAFSPFDQP--VVNSGFSNDFDG 569 Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 132/386 (35%), Positives = 168/386 (44%), Gaps = 121/386 (31%) Query 181 NLGIGNQGNANLGGGNTGSGNIGNGNKGSSNLGGGNIGNNNIGSGNRGSDNFGAGNVGTG 240 NLG GN GN+N G GNTGS N+G+GN GS+N G GN+G+ N+G GN GS NFG GN G+ Sbjct 309 NLGSGNTGNSNFGLGNTGSTNLGSGNTGSANFGSGNLGDANVGWGNLGSHNFGFGNNGSN 368 Query 241 NIGFGNQGP--IDVNLLAT-PGQNNVGLGNIGNNNMGFGNTGDANTGGGNTGNG------ 291 NIG G G I +N A G N+GL N GN+N+GF N+GD N G N+G G Sbjct 369 NIGIGLTGDNQIGINFGALNSGHGNIGLFNSGNDNVGFFNSGDKNIGIANSGLGVGPLST 428 Query 292 ------------------NIGGGNTGNNNFGFGNTGNNNIGIGLTGNNQMGI-------- 325 N G GN+G+ N G+ N G+ N G+ +G+ G+ Sbjct 429 EFFTSGEFNSGVGSSGTLNTGWGNSGSTNTGYFNAGHTNTGLFNSGDTSTGLFNSGDTNT 488 Query 326 -------NLAGLLNSGSGNIGIGNSGTNNIGLFNSGSGNIGVFNTG-ANT--LVPGDLN- 374 G N+G+ N G N G+ N G +NSGS N G N+G NT L G+LN Sbjct 489 GLFNSGDTNTGFFNAGTANFGSFNGGSTNTGDWNSGSINTGYANSGGTNTGILNAGNLNT 548 Query 375 ----------------------------------NLGVGNSGN-----------ANIGFG 389 N GVGNSG ++ GF Sbjct 549 GAFSPFDQPVVNSGFSNDFDGPFGKGGVNQSGAFNQGVGNSGFDSGDNIKGGTVSSSGFE 608 Query 390 NAGVLNTGFGNASILNTGLGNAGE--LNTGFG---------------------------- 419 N G +GF NA ++G N G +N GF Sbjct 609 NHGNFGSGFLNAGSFSSGFRNTGPEGINPGFMSGFVNSSGTFISGFFNAGTFTPGLLETF 668 Query 420 NAGFVNTGFDNSGNVNTGNGNSGNIN 445 N+GF N G SG N N SG I+ Sbjct 669 NSGFGNLGNQVSGLFNAQNVKSGPIH 694 >gi|240169655|ref|ZP_04748314.1| PPE family protein [Mycobacterium kansasii ATCC 12478] Length=1081 Score = 362 bits (928), Expect = 1e-97, Method: Compositional matrix adjust. Identities = 326/636 (52%), Positives = 372/636 (59%), Gaps = 109/636 (17%) Query 3 HFSVLPPEINSLRMYLGAGSAPMLQAAAAWDGLAAELGTAASSFSSVTTGLTGQAWQGPA 62 +FSVLPPEINSLRM+ GAGSAPMLQAA AWDGL+AELG+AASSFSSVT GL GQAWQGPA Sbjct 2 NFSVLPPEINSLRMFSGAGSAPMLQAATAWDGLSAELGSAASSFSSVTFGLAGQAWQGPA 61 Query 63 SAAMAAAAAPYAGFLTTASAQAQLAAGQAKAVASVFEAAKAAIVPPAAVAANREAFLALI 122 + AMAAAAAPYAG+L A+A+A AA QA AVASVF+AA+ A+V P VAANR F+ L+ Sbjct 62 AQAMAAAAAPYAGWLNVAAARAAGAADQANAVASVFDAARTAMVRPVVVAANRNEFVQLV 121 Query 123 RSNWLGLNAPWIAAVESLYEEYWAADVAAMTGYHAGASQAAAQLP--------------- 167 SN G NAP IAA E+ YE WA+ VA M GYH+G S A QL Sbjct 122 MSNLFGQNAPAIAAAEAEYEGMWASAVATMAGYHSGVSVIAGQLASWRGALQGVAGQVGG 181 Query 168 ------------------------------LPAGLQQFLNT-LPNLGIGNQGNANLGGGN 196 LPA F NT N+GIGN GN NLG GN Sbjct 182 AVSASPIGAAAAAVGSTVAASPVAAAAASILPAINTGFGNTGAWNVGIGNIGNYNLGSGN 241 Query 197 TGSGNIGNGNKGSSNLGGGNIGNNNIGSGNRGSDNFGAGNVGTGNIGFGNQGPIDV---N 253 G N G+GN G++NLG GN+ N N+GSGNRG N G GN G+ N+G GN+G ++ N Sbjct 242 HGDLNFGSGNYGNANLGSGNVANGNLGSGNRGFFNLGNGNFGSLNLGNGNRGDLNFGSGN 301 Query 254 LLATPGQNNVGLGNIGN----------NNMGFGNTGDANTGGGNTGNGNIGGGNTGNNNF 303 G N G GN GN NN GFGN G N G GN G+ NIG GN G+ N Sbjct 302 TGPVDGNRNFGFGNWGNANLGSGNHSSNNFGFGNWGPMNMGSGNHGSYNIGFGNFGSKNL 361 Query 304 GFGNTGNNNIGIGLTGNNQMGINLAGLLNSGSGNIGIGNSGTNNIGLFNSGSGNIGVFNT 363 GFGN GNNNIG GLTG+NQ+GI G LNSG GNIG GNSG NNIGLFNSG N G FN+ Sbjct 362 GFGNHGNNNIGFGLTGDNQVGI---GGLNSGIGNIGFGNSGNNNIGLFNSGDNNFGFFNS 418 Query 364 GANTLVPGDLNNLGVGNSGNANIGFGNAGVLNTGFGNASILNTGLGNAGELNTGFGNAGF 423 G+ N G NSGN N GF NAG NTG GN L+ G GN G + GFGN G Sbjct 419 GS--------GNFGFANSGNINTGFWNAGNWNTGAGNGGNLDFGFGNGGIKDVGFGNGGS 470 Query 424 VNTGFDNSGNVNTGNGNSGN---------------------------INTGSWNAGNVNT 456 N GF NSG+ NTG+ NSG NTG +NAG+VNT Sbjct 471 DNMGFFNSGDFNTGDFNSGGGTFGTSAGNSGSFNSSPNNTGFFNSGATNTGLFNAGSVNT 530 Query 457 GFGIITDSGLTNSGFGNTGTDVSGFFNTPTGPLAVDVSGFFNTASGGTVINGQTSGIGNI 516 GFG D + SGF NTGTDVSGF N TGP SGF NT +G G SGIGN Sbjct 531 GFGSSIDQPGSVSGFNNTGTDVSGFNN--TGPA---TSGFQNTNTG----LGLNSGIGNS 581 Query 517 GVPGTLFGSVRSG-LNTGLFNMGTAISGLFNLRQLL 551 G G SG +N+G FN GT GL + +L+ Sbjct 582 GDGDA--GWFNSGTINSGWFNKGTNDFGLAHSGELV 615 Score = 218 bits (555), Expect = 2e-54, Method: Compositional matrix adjust. Identities = 202/423 (48%), Positives = 241/423 (57%), Gaps = 64/423 (15%) Query 159 ASQAAAQLPLPAGLQQFLNT------LPNLGIGNQGNANLGGGNTGSGNIGNGNKGSSNL 212 A A L +PA +NT NLG+GN G+ N G GNTG N G+GN G N+ Sbjct 647 ALPALPHLSVPAISIPGINTGFGNTGSWNLGMGNIGDFNPGSGNTGDFNFGSGNTGGFNV 706 Query 213 GGGNIGNNNIGSGNRGSDNFGAGNVGTGNIGFGNQGPIDVNL---------LATPGQNNV 263 G GN GN N+GSGNRG N G+GN+GT N G GN G +++ G NV Sbjct 707 GSGNFGNANLGSGNRGFFNLGSGNLGTANFGIGNFGDLNLGFGNLNNGNVGFGNFGAGNV 766 Query 264 GLGNIGNNNMGFGNTGDANTGGGNTGNGNIGGGNTGNNNFGFGNTGNNNIGIGLTGNNQM 323 G N G+ N G GN G +N G GN G+ N+G GN GNNNFGFGN GNNNIG GLTG+N + Sbjct 767 GSANRGSFNFGGGNFGSSNVGSGNHGSHNLGFGNLGNNNFGFGNHGNNNIGFGLTGDNMI 826 Query 324 GINLAGLLNSGSGNIGIGNSGTNNIGLFNSGSGNIGVFNTGANTLVPGDLNNLGVGNSGN 383 GI G LN+G+ NIG GNSG NNIG FNSG N+G FN+G N G NSG+ Sbjct 827 GI---GGLNAGANNIGFGNSGNNNIGFFNSGDNNVGFFNSGNA--------NYGFANSGS 875 Query 384 ANIGFGNAGVLNTGFGNASILNTGLGNAGELNTGFGNAGF-------------------- 423 + GF N G NTGFGN S N G GNAG N G GN+G Sbjct 876 VDTGFWNTGSHNTGFGNGSDSNFGFGNAGRFNVGAGNSGLDNMGFGNSGTRNTGSFNSFA 935 Query 424 ---VNTGFDNSGNVNTGNGNSGNINTGSWNAGNVNTGFGIITDSGLTNSGFGNTGTDVSG 480 VNTG+ NSGN NTG NSG++NTG +NAG+VNTGFG D T SGFGNTGT++SG Sbjct 936 GDGVNTGWFNSGNENTGWFNSGDLNTGLFNAGSVNTGFGSSIDQPGTVSGFGNTGTNMSG 995 Query 481 FFNTPTGPLAVDVSGFFNTASGGTVINGQTSGIGNIGVPGTLFGSVRSGLNTGLFNMGTA 540 F+N+ T D SGF N+ G V SG+ N G G++ NTG+ N G A Sbjct 996 FYNSGT-----DTSGFQNSTGGAYV-----SGVQNTGN-----GALAGFFNTGIANTGIA 1040 Query 541 ISG 543 SG Sbjct 1041 NSG 1043 Score = 144 bits (362), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 157/370 (43%), Positives = 205/370 (56%), Gaps = 71/370 (19%) Query 181 NLGIGNQGNANLGGGNTGSGNIGNGNKGSSNLGGGNIGNNNIGSGNRGSDNFGAGNVGTG 240 NLG GN N N+G GN G+GN+G+ N+GS N GGGN G++N+GSGN GS N G GN+G Sbjct 745 NLGFGNLNNGNVGFGNFGAGNVGSANRGSFNFGGGNFGSSNVGSGNHGSHNLGFGNLGNN 804 Query 241 NIGFGNQGPIDVNLLATPGQNNVGLG--NIGNNNMGFGNTGDANTGGGNTGNGNIGGGNT 298 N GFGN G ++ T G N +G+G N G NN+GFGN+G+ N G N+G+ N+G N+ Sbjct 805 NFGFGNHGNNNIGFGLT-GDNMIGIGGLNAGANNIGFGNSGNNNIGFFNSGDNNVGFFNS 863 Query 299 GNNNFGFGNTGNNNIGIGLTGNNQMGINLAGLLNSGSGNIGIGNSGTNNIGLFNSGSGNI 358 GN N+GF N+G+ + G N+GS N G GN +N G GN Sbjct 864 GNANYGFANSGSVDT---------------GFWNTGSHNTGFGNGSDSNFGF-----GNA 903 Query 359 GVFNTGANTLVPGDLNNLGVGNSGNANIGFGNAGVLNTGFGNASI---LNTGLGNAGELN 415 G FN GA GNSG N+GFGN+G NTG N+ +NTG N+G N Sbjct 904 GRFNVGA-------------GNSGLDNMGFGNSGTRNTGSFNSFAGDGVNTGWFNSGNEN 950 Query 416 TGFGNAGFVNTGFDNSGNVNTGNGNSGNINTGSWNAGNVNTGFGIITDSGLTNSGFGNTG 475 TG+ N+G +NTG N+G+VN TGFG D T SGFGNTG Sbjct 951 TGWFNSGDLNTGLFNAGSVN--------------------TGFGSSIDQPGTVSGFGNTG 990 Query 476 TDVSGFFNTPTGPLAVDVSGFFNTASGGTVINGQTSGIGNIGVPGTLFGSVRSGL-NTGL 534 T++SGF+N+ T D SGF N+ G V SG+ N G G L G +G+ NTG+ Sbjct 991 TNMSGFYNSGT-----DTSGFQNSTGGAYV-----SGVQNTG-NGALAGFFNTGIANTGI 1039 Query 535 FNMGTAISGL 544 N G+ +G+ Sbjct 1040 ANSGSDNAGV 1049 Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 173/428 (41%), Positives = 208/428 (49%), Gaps = 70/428 (16%) Query 167 PLPAGLQQFLNTLPNLGIGNQGNANLGGGNTGSGNIGNGNKGSSNLGGGNIGNNNIGSGN 226 P +G Q NT LG+ N G GN+G G+ G N G+ N G N G N+ G + Sbjct 560 PATSGFQ---NTNTGLGL------NSGIGNSGDGDAGWFNSGTINSGWFNKGTNDFGLAH 610 Query 227 RGSDNFGAGNVGTGNIGFGNQGP--------------------IDVNLLATPGQN----- 261 G G N G + GF N G + V ++ PG N Sbjct 611 SGELVSGIANAGMFSSGFFNTGDNQSGFLHAILPTVALPALPHLSVPAISIPGINTGFGN 670 Query 262 ----NVGLGNIGNNNMGFGNTGDANTGGGNTGNGNIGGGNTGNNNFGFGNTGNNNIGIGL 317 N+G+GNIG+ N G GNTGD N G GNTG N+G GN GN N G GN G N+G G Sbjct 671 TGSWNLGMGNIGDFNPGSGNTGDFNFGSGNTGGFNVGSGNFGNANLGSGNRGFFNLGSGN 730 Query 318 TGNNQMGINLAGLLNSG-----SGNIGIGNSGTNNIGLFNSGSGNIGVFNTGANTLVPGD 372 G GI G LN G +GN+G GN G N+G N GS N G N G++ + G+ Sbjct 731 LGTANFGIGNFGDLNLGFGNLNNGNVGFGNFGAGNVGSANRGSFNFGGGNFGSSNVGSGN 790 Query 373 L--NNLGVGNSGNANIGFGNAGVLNTGFG------------NASILNTGLGNAGELNTGF 418 +NLG GN GN N GFGN G N GFG NA N G GN+G N GF Sbjct 791 HGSHNLGFGNLGNNNFGFGNHGNNNIGFGLTGDNMIGIGGLNAGANNIGFGNSGNNNIGF 850 Query 419 GNAGFVNTGFDNSGNVNTGNGNSGNINTGSWNAGNVNTGFGIITDSGLTNSGFGNTGTDV 478 N+G N GF NSGN N G NSG+++TG WN G+ NTGFG +DS N GFGN G Sbjct 851 FNSGDNNVGFFNSGNANYGFANSGSVDTGFWNTGSHNTGFGNGSDS---NFGFGNAGR-- 905 Query 479 SGFFNTPTGPLAVDVSGFFNTASGGTVINGQTSGIGNIGVPGTLFGSVRSGLNTGLFNMG 538 FN G +D GF N+ GT G + GV F S NTG FN G Sbjct 906 ---FNVGAGNSGLDNMGFGNS---GTRNTGSFNSFAGDGVNTGWFNSGNE--NTGWFNSG 957 Query 539 TAISGLFN 546 +GLFN Sbjct 958 DLNTGLFN 965 Score = 97.4 bits (241), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 142/378 (38%), Positives = 175/378 (47%), Gaps = 84/378 (22%) Query 180 PNLGIGNQGNANLGGGNTGSGNIGNG--NKGSSNLGGGNIGNNNIGSGNRGSDNFGAGNV 237 NLG GN GN N+G G TG +G G N G N+G GN GNNNIG N G +NFG N Sbjct 359 KNLGFGNHGNNNIGFGLTGDNQVGIGGLNSGIGNIGFGNSGNNNIGLFNSGDNNFGFFNS 418 Query 238 GTGNIGFGNQGPIDVNL-------------------LATPGQNNVGLGNIGNNNMGFGN- 277 G+GN GF N G I+ G +VG GN G++NMGF N Sbjct 419 GSGNFGFANSGNINTGFWNAGNWNTGAGNGGNLDFGFGNGGIKDVGFGNGGSDNMGFFNS 478 Query 278 ----TGDANTGGGNTGN--GNIGGGNTGNNNFGFGNTGNNNIGI---------------- 315 TGD N+GGG G GN G N+ NN GF N+G N G+ Sbjct 479 GDFNTGDFNSGGGTFGTSAGNSGSFNSSPNNTGFFNSGATNTGLFNAGSVNTGFGSSIDQ 538 Query 316 --GLTGNNQMGINLAGLLNSGSG-------------NIGIGNSGTNNIGLFNSGSGNIGV 360 ++G N G +++G N+G N GIGNSG + G FNSG+ N G Sbjct 539 PGSVSGFNNTGTDVSGFNNTGPATSGFQNTNTGLGLNSGIGNSGDGDAGWFNSGTINSGW 598 Query 361 FNTGANTLVPGDLNNL--GVGNSGNANIGFGNAGVLNTGFGNASI--------------- 403 FN G N L G+ N+G + GF N G +GF +A + Sbjct 599 FNKGTNDFGLAHSGELVSGIANAGMFSSGFFNTGDNQSGFLHAILPTVALPALPHLSVPA 658 Query 404 -----LNTGLGNAGELNTGFGNAGFVNTGFDNSGNVNTGNGNSGNINTGSWNAGNVNTGF 458 +NTG GN G N G GN G N G N+G+ N G+GN+G N GS N GN N G Sbjct 659 ISIPGINTGFGNTGSWNLGMGNIGDFNPGSGNTGDFNFGSGNTGGFNVGSGNFGNANLGS 718 Query 459 GIITDSGLTNSGFGNTGT 476 G + G N G GN GT Sbjct 719 G---NRGFFNLGSGNLGT 733 Score = 38.9 bits (89), Expect = 2.5, Method: Compositional matrix adjust. Identities = 73/190 (39%), Positives = 89/190 (47%), Gaps = 35/190 (18%) Query 179 LPNLGIGNQGNANLGGGNTGSGNIGNGNKGSSNLGGGNIGNNNIGSGNRGSDNFGAGNVG 238 L N+G GN G N G N+ +G+ N G N GN N G N G N G N G Sbjct 915 LDNMGFGNSGTRNTGSFNSFAGD-------GVNTGWFNSGNENTGWFNSGDLNTGLFNAG 967 Query 239 TGNIGFGN--QGPIDVNLLATPGQNNVGLGNIGNNNMGFGN-TGDANTGG-GNTGNGNIG 294 + N GFG+ P V+ G N G N G + GF N TG A G NTGNG + Sbjct 968 SVNTGFGSSIDQPGTVSGFGNTGTNMSGFYNSGTDTSGFQNSTGGAYVSGVQNTGNGALA 1027 Query 295 GGNTGNNNFGFGNTGNNNIGIGLTGNNQMGINLAGLLNSGSGNIGIGNSGTNNIGLFNSG 354 GF NT GI G+ NSGS N G+GNSG++N G+ NSG Sbjct 1028 ---------GFFNT---------------GIANTGIANSGSDNAGVGNSGSDNSGVQNSG 1063 Query 355 SGNIGVFNTG 364 + + G FNTG Sbjct 1064 TFSSGGFNTG 1073 >gi|306791127|ref|ZP_07429429.1| putative PPE family protein [Mycobacterium tuberculosis SUMu005] gi|308340243|gb|EFP29094.1| putative PPE family protein [Mycobacterium tuberculosis SUMu005] Length=553 Score = 359 bits (922), Expect = 6e-97, Method: Compositional matrix adjust. Identities = 301/540 (56%), Positives = 351/540 (65%), Gaps = 83/540 (15%) Query 3 HFSVLPPEINSLRMYLGAGSAPMLQAAAAWDGLAAELGTAASSFSSVTTGLTGQAWQGPA 62 +++VLPPE+NSLRM+ GAGSAPML AA AWDGLAAELG+AASSF SVT+ L QAWQGPA Sbjct 2 NYAVLPPELNSLRMFTGAGSAPMLAAAVAWDGLAAELGSAASSFGSVTSDLASQAWQGPA 61 Query 63 SAAMAAAAAPYAGFLTTASAQAQLAAGQAKAVASVFEAAKAAIVPPAAVAANREAFLALI 122 +A AAAA YAG+L+ A+A+A AA QAKAVAS FEAA+AA V P VAANR AF L+ Sbjct 62 AAMAAAAAP-YAGWLSAAAARAAGAAAQAKAVASAFEAARAATVHPLLVAANRNAFAQLV 120 Query 123 RSNWLGLNAPWIAAVESLYEEYWAADVAAMTGYHAGASQAAAQLPLPAGLQQFLNTLPNL 182 SNW GLNAP IAAVE YE+ WAADVAAM GYH+GAS AA QL +P QQ L LPNL Sbjct 121 MSNWFGLNAPLIAAVEGAYEQMWAADVAAMVGYHSGASAAAEQL-VP--FQQALQQLPNL 177 Query 183 GIGNQGNANLGGGNTGSGNIGNGNKGSSNLGGGNIGNNNIGS------------------ 224 GIGN GNANLGGGNTG N GNGN G++NLG GN G+ N+GS Sbjct 178 GIGNIGNANLGGGNTGDLNTGNGNIGNTNLGSGNRGDANLGSGNIGNSNVGGGNVGNGNF 237 Query 225 -----------------GNRGSDNFGAGNVGTGNIGFGNQGPIDVNLLATPGQNNVGLGN 267 GN G+ N G+GN G N+GFGN G NNVG GN Sbjct 238 GSGNGRAGLPGSGNVGNGNLGNSNLGSGNTGNSNVGFGN-----------TGNNNVGTGN 286 Query 268 IGNNNMGFGNTGDANTGGGNTGNGNIGGGNTGNNNFGFGNTGNNNIGIGLTGNNQMGINL 327 G+ N+G GNTG +N G GN G GNI GFGNTGN NIG GLTGNNQ+GI Sbjct 287 AGSGNIGAGNTGSSNWGFGNNGIGNI----------GFGNTGNGNIGFGLTGNNQVGI-- 334 Query 328 AGLLNSGSGNIGIGNSGTNNIGLFNSGSGNIGVFNTGANTLVPGDL----------NNLG 377 G LNSGSGNIG+ NSGTNN+G FNSG+GN+G+ N+ + G+ +N G Sbjct 335 -GGLNSGSGNIGLFNSGTNNVGFFNSGNGNLGIGNSSDANVGIGNSGATVGPFVAGHNTG 393 Query 378 VGNSGNANIGFGNAGVLNTGFGNASILNTGLGNAGELNTGFGNAGFVNTGFDNSGNVNTG 437 GNSG+ N G GNAG +NTGFGN +N G GN+G+LN G NAG +NTG NSG NTG Sbjct 394 FGNSGSLNTGMGNAGGVNTGFGNGGAINLGFGNSGQLNAGSFNAGSINTGNFNSGQGNTG 453 Query 438 N----------GNSGNINTGSWNAGNVNTGFGIITDSGLTNSGFGNTGTDVSGFFNTPTG 487 + NSG NTG++NAG++NTGFG + NSGFGN GT+ SGFFNT G Sbjct 454 DFNAGVRNTGWSNSGLTNTGAFNAGSLNTGFGAVGTGSGPNSGFGNAGTNNSGFFNTGVG 513 Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust. Identities = 65/166 (40%), Positives = 79/166 (48%), Gaps = 26/166 (15%) Query 381 SGNANIGFGNAGVLNTGFGNASILNTGLGNAGELNTGFGNAGFVNTGFDNSGNVNTGNGN 440 +GN+N+GFGN G N G GNA N G GN G N GFGN G N GF N+GN N G G Sbjct 267 TGNSNVGFGNTGNNNVGTGNAGSGNIGAGNTGSSNWGFGNNGIGNIGFGNTGNGNIGFGL 326 Query 441 SGNINTGSWNAGNVNTGFGIITDSGLTNSGFGNTGTDVSGFFNTPTGPLAVDVSGFFNTA 500 +GN G G +N+G G I GL NSG N G FFN+ Sbjct 327 TGNNQVG---IGGLNSGSGNI---GLFNSGTNNVG--------------------FFNSG 360 Query 501 SGGTVINGQTSGIGNIGVPGTLFGSVRSGLNTGLFNMGTAISGLFN 546 +G I + IG G G +G NTG N G+ +G+ N Sbjct 361 NGNLGIGNSSDANVGIGNSGATVGPFVAGHNTGFGNSGSLNTGMGN 406 >gi|118616670|ref|YP_905002.1| PPE family protein [Mycobacterium ulcerans Agy99] gi|118568780|gb|ABL03531.1| PPE family protein [Mycobacterium ulcerans Agy99] Length=608 Score = 358 bits (918), Expect = 2e-96, Method: Compositional matrix adjust. Identities = 303/605 (51%), Positives = 353/605 (59%), Gaps = 100/605 (16%) Query 3 HFSVLPPEINSLRMYLGAGSAPMLQAAAAWDGLAAELGTAASSFSSVTTGLTGQAWQGPA 62 +F +LPPEINS RM+ GAGS PML AA AWDGLA ELG+AA SF SVT+GL G +WQG A Sbjct 2 NFPMLPPEINSARMFAGAGSGPMLSAAMAWDGLAVELGSAAESFGSVTSGLVGSSWQGAA 61 Query 63 SAAMAAAAAPYAGFLTTASAQAQLAAGQAKAVASVFEAAKAAIVPPAAVAANREAFLALI 122 + AM+AAAAPY +L A+ +A AA QAK V S FEAA+AA++ P AVAANR A + L+ Sbjct 62 ATAMSAAAAPYVSWLNAAAVRAGEAALQAKEVVSAFEAARAAMIHPLAVAANRNALVQLV 121 Query 123 RSNWLGLNAPWIAAVESLYEEYWAADVAAMTGYHAGA----------SQAAAQLPLPA-- 170 +N G NAP IAA E YE+ WAADVAAM GYH GA QA L PA Sbjct 122 LTNLFGQNAPAIAAAEGSYEQMWAADVAAMLGYHGGASAAASGLASWQQALQGLAGPAAS 181 Query 171 ---GLQQFLNT-----------LPNLGIGNQGNANLGGGNTGSGNIGNGNKGSSNLGGGN 216 GL NT + NLG GN GN NLGGGNTG+ N+G+GN G NLG GN Sbjct 182 VILGL-SIGNTGVGNLSIGNIGVFNLGGGNAGNLNLGGGNTGNANLGSGNNGFFNLGSGN 240 Query 217 IGNNNIGSGNRGSDNFGAGNVGTGNIGFGN-QGPIDVNLLATPGQNNVGLGNIGNNNMGF 275 GN N G+GNRG+ N+G+GN+G N+GFGN G + G N+G GN+GN N G Sbjct 241 TGNTNFGNGNRGNLNWGSGNLGNANVGFGNFLGQGNFGFGNRVGDANLGSGNLGNANFGN 300 Query 276 GNTGDANTGGGNTGNGNIGGGNTGNNNFGFGNTGNNNIGIGLTGNNQMGINLAGLLNSGS 335 GN GD N G GN G N+G GN G+NN GFGN G+NNIG GLTGNNQ+GIN AG LN G Sbjct 301 GNLGDTNLGSGNNGFSNVGFGNLGSNNLGFGNNGDNNIGFGLTGNNQVGINFAG-LNGGI 359 Query 336 GNIGIGNSGTNNIGLFNSGSGNIGVFNTGANTLVPGDLNNLGVGNSGNANIGFGNAGVLN 395 GNI +GNSG NN+G FNSGS N+G F NSG+ N GF N+G N Sbjct 360 GNIDLGNSGDNNVGFFNSGSNNVGFF------------------NSGDRNFGFANSGDTN 401 Query 396 TGFGNASILNTGLGNAGELNTGFGNAGFV--------------------NTG-FD----- 429 TGF NA +NTG GN G N GFGN G NTG F+ Sbjct 402 TGFWNAGRVNTGFGNGGNFNLGFGNGGAANVGVGNGGGGNLGFGNSGTENTGSFNSGGDN 461 Query 430 ----------NSGNVNTGNGNSGNINTGSWNAGNVNTGFGIITDSGLTNSGFGNTGTDVS 479 NSG VNTG NSG+ NTG +NAG+VNTG G + SGFGNTG VS Sbjct 462 GRNGGNTGSFNSGYVNTGFFNSGSTNTGLFNAGSVNTGIGSPDTQPGSISGFGNTGAGVS 521 Query 480 GFFNTPTGPLAVDVSGFFNTASGGTVINGQTSGIGNIGVPGTLFGSVRSGL-NTGLFNMG 538 GF N+ SGF N A+ G SGI N+ G + GL NTG N G Sbjct 522 GFNNSGDA-----TSGFMNVAT----TFGFASGINNV-------GDYQVGLFNTGFGNAG 565 Query 539 TAISG 543 A SG Sbjct 566 IANSG 570 Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 116/327 (36%), Positives = 146/327 (45%), Gaps = 87/327 (26%) Query 181 NLGIGNQGNANLGGGNTGSGNIGNGNKGSSNLGGGNIGNNNIGSGNRGSDNFGAG----- 235 NLG GN GNAN G GN G N+G+GN G SN+G GN+G+NN+G GN G +N G G Sbjct 287 NLGSGNLGNANFGNGNLGDTNLGSGNNGFSNVGFGNLGSNNLGFGNNGDNNIGFGLTGNN 346 Query 236 ---------NVGTGNIGFGNQGPIDVNLLATPGQNNVGLGNIGNNNMGFGNTGD------ 280 N G GNI GN G +V G NNVG N G+ N GF N+GD Sbjct 347 QVGINFAGLNGGIGNIDLGNSGDNNVGFF-NSGSNNVGFFNSGDRNFGFANSGDTNTGFW 405 Query 281 ----ANTGGGNTGNGNIGGG---------------------------------------- 296 NTG GN GN N+G G Sbjct 406 NAGRVNTGFGNGGNFNLGFGNGGAANVGVGNGGGGNLGFGNSGTENTGSFNSGGDNGRNG 465 Query 297 ------NTGNNNFGFGNTGNNNIGIGLTGNNQMGI----NLAGLLNSGSGNIGIGNSGTN 346 N+G N GF N+G+ N G+ G+ GI G + SG GN G G SG N Sbjct 466 GNTGSFNSGYVNTGFFNSGSTNTGLFNAGSVNTGIGSPDTQPGSI-SGFGNTGAGVSGFN 524 Query 347 NIGLFNSGSGNIGV---FNTGANTLVPGDLNNLGVGNSGNANIGFGNAGVLNTGFGNASI 403 N G SG N+ F +G N + GD +G+ N+G N G N+G G N+ Sbjct 525 NSGDATSGFMNVATTFGFASGINNV--GDYQ-VGLFNTGFGNAGIANSGNATFGIANSGA 581 Query 404 LNTGLGNAGE-----LNTGFGNAGFVN 425 L++G+ N+G NTG +GF N Sbjct 582 LSSGISNSGTNSSGGFNTGDDQSGFFN 608 >gi|323719996|gb|EGB29108.1| PPE family protein [Mycobacterium tuberculosis CDC1551A] gi|339294522|gb|AEJ46633.1| PPE family protein [Mycobacterium tuberculosis CCDC5079] Length=679 Score = 354 bits (908), Expect = 3e-95, Method: Compositional matrix adjust. Identities = 307/661 (47%), Positives = 379/661 (58%), Gaps = 117/661 (17%) Query 1 MAHFSVLPPEINSLRMYLGAGSAPMLQAAAAWDGLAAELGTAASSFSSVTTGLTGQAWQG 60 M +FSVLPPEINS M+ GAG PML AA+AW GLA +LG+AA+SFS+VT+ L +WQG Sbjct 1 MMNFSVLPPEINSALMFAGAGPGPMLAAASAWTGLAGDLGSAAASFSAVTSQLATGSWQG 60 Query 61 PASAAMAAAAAPYAGFLTTASAQAQLAAGQAKAVASVFEAAKAAIVPPAAVAANREAFLA 120 PASAAM AA YA +LTTA+AQA+ AAGQA+A S FEAA AA V P AV+ANR + Sbjct 61 PASAAMTGVAASYARWLTTAAAQAEQAAGQAQAAVSAFEAALAATVHPGAVSANRGRLRS 120 Query 121 LIRSNWLGLNAPWIAAVESLYEEYWAADVAAMTGYHAGASQAAAQL----PLPAGLQQ-- 174 L+ SN LG NAP IAAVE++YE+ WAADVAAM GYH AS A L P P+ Sbjct 121 LVASNLLGQNAPAIAAVEAVYEQMWAADVAAMLGYHGEASAVALSLTPFTPSPSAAATPG 180 Query 175 ---------FLN-----------TLPNLGIGNQGNANLGGGNTGSGNIGN---------- 204 FL+ NLG+GN G+ N G NTGS N+GN Sbjct 181 GAVIIAGFPFLDLGNVTIGGFNLASGNLGLGNLGSFNPGSANTGSVNLGNANIGDLNLGS 240 Query 205 GNKGSSNLGGGNIGNNNIGSGNRGSDNFGAGNVGTGNIGFGNQGPI--------DVNL-- 254 GN GS NLGGGN G+ N GSGN G+ N+G+GN+G+ N+G GN G D N Sbjct 241 GNIGSYNLGGGNTGDLNPGSGNTGTLNWGSGNIGSYNLGGGNLGSYNLGSGNTGDTNFGG 300 Query 255 ---------LATPGQNNVGLGNIGNNNMGFGNTGDANTGGGNTGNGNIGGGNTGNNNFGF 305 G +N G GN GN N G GNTGD N G GN G+GNIG GN G++N GF Sbjct 301 GNTGNLNVGGGNTGNSNFGFGNTGNVNFGNGNTGDTNFGSGNLGSGNIGFGNKGSHNIGF 360 Query 306 GNTGNNNIGIGLTGNNQMGINLAGLLNSGSGNIGIGNSGTNNIGLFNSGSGNIGVFNT-- 363 GN+GNNNIG GLTG+NQ+G G LNSGSGN+G GNSG NIG FNSG+ NIG+ N+ Sbjct 361 GNSGNNNIGFGLTGDNQIGF---GALNSGSGNLGFGNSGNGNIGFFNSGNNNIGMGNSGN 417 Query 364 --GANTLVPGD--LNNLGVGNSGNANIGFGNAGVL--------------------NTGFG 399 GA ++ G + G GNSG + G GN+G L NTG+ Sbjct 418 GVGALSVEFGSSAERSSGFGNSGELSTGIGNSGQLSTGWFNSATTSTGWFNSGTTNTGWF 477 Query 400 NASILNTGLG--------------NAGELNTGFGNAGFVNTGFDNSGNVNTGNGNSGNIN 445 N+ NTG+G N+G NTG NAG +NTG NSGNVNTG NSGNIN Sbjct 478 NSGTTNTGIGNSGGNLVTGSMGLFNSGHTNTGSFNAGSMNTGDFNSGNVNTGYFNSGNIN 537 Query 446 TGSWNAGNVNTGFGIITDSGLTNSGFGNTGTDVSGF-----FNTPTGPLAVDVSGFFNTA 500 TG +N+G++NTG + + NSG+ +TGT+ SG+ FN+ A D F T Sbjct 538 TGFFNSGDLNTGLFNSVNQPVQNSGWLHTGTNNSGYANAGTFNSGFDNNARDEHAEFVTG 597 Query 501 SGGTV-INGQTSGIGNIG---------VPGTLFGSVRSGLNTGLFNMGTAISGLFNLRQL 550 + G + +GI N+G VP T+ G+ +G N GT+ISG FN L Sbjct 598 NSGLANVGNYNAGIINVGDHLSGFRNSVP-TITGTANI---SGFVNAGTSISGFFNFGSL 653 Query 551 L 551 + Sbjct 654 M 654 Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 160/396 (41%), Positives = 201/396 (51%), Gaps = 106/396 (26%) Query 181 NLGIGNQGNANLGGGNTGSGNIGNGNKGSSNLGGGNIGNNNIGSGNRGSDNFGAGNVGTG 240 NLG GN G+ N GGGNTG+ N+G GN G+SN G GN GN N G+GN G NFG+GN+G+G Sbjct 287 NLGSGNTGDTNFGGGNTGNLNVGGGNTGNSNFGFGNTGNVNFGNGNTGDTNFGSGNLGSG 346 Query 241 NIGFGNQGPIDVNLLATPGQNNVGLGNIGNNNMGFGNTGDANTGGG--NTGNGNIGGGNT 298 NIGFGN+G +N+G GN GNNN+GFG TGD G G N+G+GN+G GN+ Sbjct 347 NIGFGNKG-----------SHNIGFGNSGNNNIGFGLTGDNQIGFGALNSGSGNLGFGNS 395 Query 299 GNNNFGFGNTGNNNIGIGLTGNNQMGINLA------------------------------ 328 GN N GF N+GNNNIG+G +GN +++ Sbjct 396 GNGNIGFFNSGNNNIGMGNSGNGVGALSVEFGSSAERSSGFGNSGELSTGIGNSGQLSTG 455 Query 329 -------------------GLLNSGSGNIGIGNSG----TNNIGLFNSGSGNIGVFNTGA 365 G NSG+ N GIGNSG T ++GLFNSG N G FN G Sbjct 456 WFNSATTSTGWFNSGTTNTGWFNSGTTNTGIGNSGGNLVTGSMGLFNSGHTNTGSFNAG- 514 Query 366 NTLVPGDLN----NLGVGNSGNANIGFGNAGVLNTGFGNA---SILNTGLGNAGELNTGF 418 ++ GD N N G NSGN N GF N+G LNTG N+ + N+G + G N+G+ Sbjct 515 -SMNTGDFNSGNVNTGYFNSGNINTGFFNSGDLNTGLFNSVNQPVQNSGWLHTGTNNSGY 573 Query 419 GNAGFVNTGFDNSGNVNTGN---GNSGNINTGSWNAGNVNTG-------------FGIIT 462 NAG N+GFDN+ GNSG N G++NAG +N G G Sbjct 574 ANAGTFNSGFDNNARDEHAEFVTGNSGLANVGNYNAGIINVGDHLSGFRNSVPTITGTAN 633 Query 463 DSGLTN---------------SGFGNTGTDVSGFFN 483 SG N SGF N +VSG+ N Sbjct 634 ISGFVNAGTSISGFFNFGSLMSGFANFDDEVSGYLN 669 >gi|308373181|ref|ZP_07431301.2| PPE family protein [Mycobacterium tuberculosis SUMu005] gi|308374342|ref|ZP_07435680.2| PPE family protein [Mycobacterium tuberculosis SUMu006] gi|308375613|ref|ZP_07444506.2| PPE family protein [Mycobacterium tuberculosis SUMu007] gi|308376758|ref|ZP_07439927.2| PPE family protein [Mycobacterium tuberculosis SUMu008] gi|308338567|gb|EFP27418.1| PPE family protein [Mycobacterium tuberculosis SUMu005] gi|308342268|gb|EFP31119.1| PPE family protein [Mycobacterium tuberculosis SUMu006] gi|308345763|gb|EFP34614.1| PPE family protein [Mycobacterium tuberculosis SUMu007] gi|308350063|gb|EFP38914.1| PPE family protein [Mycobacterium tuberculosis SUMu008] Length=679 Score = 352 bits (904), Expect = 7e-95, Method: Compositional matrix adjust. Identities = 303/662 (46%), Positives = 377/662 (57%), Gaps = 119/662 (17%) Query 1 MAHFSVLPPEINSLRMYLGAGSAPMLQAAAAWDGLAAELGTAASSFSSVTTGLTGQAWQG 60 M +FSVLPPEINS M+ GAG PML AA+AW GLA +LG+AA+SFS+VT+ L +WQG Sbjct 1 MMNFSVLPPEINSALMFAGAGPGPMLAAASAWTGLAGDLGSAAASFSAVTSQLATGSWQG 60 Query 61 PASAAMAAAAAPYAGFLTTASAQAQLAAGQAKAVASVFEAAKAAIVPPAAVAANREAFLA 120 PASAAM AA YA +LTTA+AQA+ AAGQA+A S FEAA AA V P AV+ANR + Sbjct 61 PASAAMTGVAASYARWLTTAAAQAEQAAGQAQAAVSAFEAALAATVHPGAVSANRGRLRS 120 Query 121 LIRSNWLGLNAPWIAAVESLYEEYWAADVAAMTGYHAGASQAAAQL----PLPAGLQQ-- 174 L+ SN LG NAP IAAVE++YE+ WAADVAAM GYH AS A L P P+ Sbjct 121 LVASNLLGQNAPAIAAVEAVYEQMWAADVAAMLGYHGEASAVALSLTPFTPSPSAAATPG 180 Query 175 ---------FLN-----------TLPNLGIGNQGNANLGGGNTGSGNIGN---------- 204 FL+ NLG+GN G+ N G NTGS N+GN Sbjct 181 GAVIIAGFPFLDLGNVTIGGFNLASGNLGLGNLGSFNPGSANTGSVNLGNANIGDLNLGS 240 Query 205 GNKGSSNLGGGNIGNNNIGSGNRGSDNFGAGNVGTGNIGFGNQGPI--------DVNL-- 254 GN GS NLGGGN G+ N GSGN G+ N+G+GN+G+ N+G GN G D N Sbjct 241 GNIGSYNLGGGNTGDLNPGSGNTGTLNWGSGNIGSYNLGGGNLGSYNLGSGNTGDTNFGG 300 Query 255 ---------LATPGQNNVGLGNIGNNNMGFGNTGDANTGGGNTGNGNIGGGNTGNNNFGF 305 G +N G GN GN N G GNTGD N G GN G+GNIG GN G++N GF Sbjct 301 GNTGNLNVGGGNTGNSNFGFGNTGNVNFGNGNTGDTNFGSGNLGSGNIGFGNKGSHNIGF 360 Query 306 GNTGNNNIGIGLTGNNQMGINLAGLLNSGSGNIGIGNSGTNNIGLFNSGSGNIGVFNT-- 363 GN+GNNNIG GLTG+NQ+G G LNSGSGN+G GNSG NIG FNSG+ NIG+ N+ Sbjct 361 GNSGNNNIGFGLTGDNQIGF---GALNSGSGNLGFGNSGNGNIGFFNSGNNNIGMGNSGN 417 Query 364 --GANTLVPGD--LNNLGVGNSGNANIGFGNAGVLNTGFGNASILNTGLGNAGELNTGFG 419 GA ++ G + G GNSG + G GN+G L+TG+ N++ +TG N+G NTG+ Sbjct 418 GVGALSVEFGSSAERSSGFGNSGELSTGIGNSGQLSTGWFNSATTSTGWFNSGTTNTGWF 477 Query 420 NAGFVNTGFDNS------------------------GNVNTGNGNSGNINTGSWNAGNVN 455 N+G NTG NS G++NTG+ NSGN+NTG +N+GN+N Sbjct 478 NSGTTNTGIGNSGGNLVTGSMGLFNSGHTNTGSFNAGSMNTGDFNSGNVNTGYFNSGNIN 537 Query 456 TGF--------GIIT------------DSGLTNSGFGNTGTDVSGFFNTPTGPLAVDVSG 495 TGF G+ +G NSG+ N GT SGF N A V+G Sbjct 538 TGFFNSGDLNTGLFNSVNQPVQNSGWLHTGTNNSGYANAGTFNSGFDNNARDEHAEFVTG 597 Query 496 FFNTASGGTV------INGQTSGIGNIGVPGTLFGSVRSGLNTGLFNMGTAISGLFNLRQ 549 A+ G ++ SG N VP T+ G+ +G N GT+ISG FN Sbjct 598 NSGLANVGNYNAGIINVDDHLSGFRN-SVP-TITGTANI---SGFVNAGTSISGFFNFGS 652 Query 550 LL 551 L+ Sbjct 653 LM 654 Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 161/396 (41%), Positives = 203/396 (52%), Gaps = 106/396 (26%) Query 181 NLGIGNQGNANLGGGNTGSGNIGNGNKGSSNLGGGNIGNNNIGSGNRGSDNFGAGNVGTG 240 NLG GN G+ N GGGNTG+ N+G GN G+SN G GN GN N G+GN G NFG+GN+G+G Sbjct 287 NLGSGNTGDTNFGGGNTGNLNVGGGNTGNSNFGFGNTGNVNFGNGNTGDTNFGSGNLGSG 346 Query 241 NIGFGNQGPIDVNLLATPGQNNVGLGNIGNNNMGFGNTGDANTGGG--NTGNGNIGGGNT 298 NIGFGN+G +N+G GN GNNN+GFG TGD G G N+G+GN+G GN+ Sbjct 347 NIGFGNKG-----------SHNIGFGNSGNNNIGFGLTGDNQIGFGALNSGSGNLGFGNS 395 Query 299 GNNNFGFGNTGNNNIGIGLTGNNQMGINLA------------------------------ 328 GN N GF N+GNNNIG+G +GN +++ Sbjct 396 GNGNIGFFNSGNNNIGMGNSGNGVGALSVEFGSSAERSSGFGNSGELSTGIGNSGQLSTG 455 Query 329 -------------------GLLNSGSGNIGIGNSG----TNNIGLFNSGSGNIGVFNTGA 365 G NSG+ N GIGNSG T ++GLFNSG N G FN G Sbjct 456 WFNSATTSTGWFNSGTTNTGWFNSGTTNTGIGNSGGNLVTGSMGLFNSGHTNTGSFNAG- 514 Query 366 NTLVPGDLN----NLGVGNSGNANIGFGNAGVLNTGFGNA---SILNTGLGNAGELNTGF 418 ++ GD N N G NSGN N GF N+G LNTG N+ + N+G + G N+G+ Sbjct 515 -SMNTGDFNSGNVNTGYFNSGNINTGFFNSGDLNTGLFNSVNQPVQNSGWLHTGTNNSGY 573 Query 419 GNAGFVNTGFDNSGNVNTGN---GNSGNINTGSWNAGNVN-----TGF--------GIIT 462 NAG N+GFDN+ GNSG N G++NAG +N +GF G Sbjct 574 ANAGTFNSGFDNNARDEHAEFVTGNSGLANVGNYNAGIINVDDHLSGFRNSVPTITGTAN 633 Query 463 DSGLTN---------------SGFGNTGTDVSGFFN 483 SG N SGF N +VSG+ N Sbjct 634 ISGFVNAGTSISGFFNFGSLMSGFANFDDEVSGYLN 669 >gi|308378968|ref|ZP_07484506.2| PPE family protein [Mycobacterium tuberculosis SUMu010] gi|308358702|gb|EFP47553.1| PPE family protein [Mycobacterium tuberculosis SUMu010] Length=679 Score = 352 bits (903), Expect = 1e-94, Method: Compositional matrix adjust. Identities = 305/661 (47%), Positives = 378/661 (58%), Gaps = 117/661 (17%) Query 1 MAHFSVLPPEINSLRMYLGAGSAPMLQAAAAWDGLAAELGTAASSFSSVTTGLTGQAWQG 60 M +FSVLPPEINS M+ GAG PML AA+AW GLA +LG+AA+SFS+VT+ L +WQG Sbjct 1 MMNFSVLPPEINSALMFAGAGPGPMLAAASAWTGLAGDLGSAAASFSAVTSQLATGSWQG 60 Query 61 PASAAMAAAAAPYAGFLTTASAQAQLAAGQAKAVASVFEAAKAAIVPPAAVAANREAFLA 120 PASAAM AA YA +LTTA+AQA+ AAGQA+A S FEAA AA V P AV+ANR + Sbjct 61 PASAAMTGVAASYARWLTTAAAQAEQAAGQAQAAVSAFEAALAATVHPGAVSANRGRLRS 120 Query 121 LIRSNWLGLNAPWIAAVESLYEEYWAADVAAMTGYHAGASQAAAQL----PLPAGLQQ-- 174 L+ SN LG NAP IAAVE++YE+ WAADVAAM GYH AS A L P P+ Sbjct 121 LVASNLLGQNAPAIAAVEAVYEQMWAADVAAMLGYHGEASAVALSLTPFTPSPSAAATPG 180 Query 175 ---------FLN-----------TLPNLGIGNQGNANLGGGNTGSGNIGNGNKGSSNLGG 214 FL+ NLG+GN G+ N G NTGS N+GN N G NLG Sbjct 181 GAVIIAGFPFLDLGNVTIGGFNLASGNLGLGNLGSFNPGSANTGSVNLGNANIGDLNLGS 240 Query 215 GNIGNNNIG----------SGNRGSDNFGAGNVGTGNIGFGNQGPI--------DVNL-- 254 GNIG+ N+G SGN G+ N+G+GN+G+ N+G GN G D N Sbjct 241 GNIGSYNLGGGNTGDLNPDSGNTGTLNWGSGNIGSYNLGGGNLGSYNLGSGNTGDTNFGG 300 Query 255 ---------LATPGQNNVGLGNIGNNNMGFGNTGDANTGGGNTGNGNIGGGNTGNNNFGF 305 G +N G GN GN N G GNTGD N G GN G+GNIG GN G++N GF Sbjct 301 GNTGNLNVGGGNTGNSNFGFGNTGNVNFGNGNTGDTNFGSGNLGSGNIGFGNKGSHNIGF 360 Query 306 GNTGNNNIGIGLTGNNQMGINLAGLLNSGSGNIGIGNSGTNNIGLFNSGSGNIGVFNT-- 363 GN+GNNNIG GLTG+NQ+G G LNSGSGN+G GNSG NIG FNSG+ NIG+ N+ Sbjct 361 GNSGNNNIGFGLTGDNQIGF---GALNSGSGNLGFGNSGNGNIGFFNSGNNNIGMGNSGN 417 Query 364 --GANTLVPGD--LNNLGVGNSGNANIGFGNAGVL--------------------NTGFG 399 GA ++ G + G GNSG + G GN+G L NTG+ Sbjct 418 GVGALSVEFGSSAERSSGFGNSGELSTGIGNSGQLSTGWFNSATTSTGWFNSGTTNTGWF 477 Query 400 NASILNTGLG--------------NAGELNTGFGNAGFVNTGFDNSGNVNTGNGNSGNIN 445 N+ NTG+G N+G NTG NAG +NTG NSGNVNTG NSGNIN Sbjct 478 NSGTTNTGIGNSGGNLVTGSMGLFNSGHTNTGSFNAGSMNTGDFNSGNVNTGYFNSGNIN 537 Query 446 TGSWNAGNVNTGFGIITDSGLTNSGFGNTGTDVSGF-----FNTPTGPLAVDVSGFFNTA 500 TG +N+G++NTG + + NSG+ +TGT+ SG+ FN+ A D F T Sbjct 538 TGFFNSGDLNTGLFNSVNQPVQNSGWLHTGTNNSGYANAGTFNSGFDNNARDEHAEFVTG 597 Query 501 SGGTV-INGQTSGIGNIG---------VPGTLFGSVRSGLNTGLFNMGTAISGLFNLRQL 550 + G + +GI N+G VP T+ G+ +G N GT+ISG FN L Sbjct 598 NSGLANVGNYNAGIINVGDHLSGFRNSVP-TITGTANI---SGFVNAGTSISGFFNFGSL 653 Query 551 L 551 + Sbjct 654 M 654 Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 160/396 (41%), Positives = 201/396 (51%), Gaps = 106/396 (26%) Query 181 NLGIGNQGNANLGGGNTGSGNIGNGNKGSSNLGGGNIGNNNIGSGNRGSDNFGAGNVGTG 240 NLG GN G+ N GGGNTG+ N+G GN G+SN G GN GN N G+GN G NFG+GN+G+G Sbjct 287 NLGSGNTGDTNFGGGNTGNLNVGGGNTGNSNFGFGNTGNVNFGNGNTGDTNFGSGNLGSG 346 Query 241 NIGFGNQGPIDVNLLATPGQNNVGLGNIGNNNMGFGNTGDANTGGG--NTGNGNIGGGNT 298 NIGFGN+G +N+G GN GNNN+GFG TGD G G N+G+GN+G GN+ Sbjct 347 NIGFGNKG-----------SHNIGFGNSGNNNIGFGLTGDNQIGFGALNSGSGNLGFGNS 395 Query 299 GNNNFGFGNTGNNNIGIGLTGNNQMGINLA------------------------------ 328 GN N GF N+GNNNIG+G +GN +++ Sbjct 396 GNGNIGFFNSGNNNIGMGNSGNGVGALSVEFGSSAERSSGFGNSGELSTGIGNSGQLSTG 455 Query 329 -------------------GLLNSGSGNIGIGNSG----TNNIGLFNSGSGNIGVFNTGA 365 G NSG+ N GIGNSG T ++GLFNSG N G FN G Sbjct 456 WFNSATTSTGWFNSGTTNTGWFNSGTTNTGIGNSGGNLVTGSMGLFNSGHTNTGSFNAG- 514 Query 366 NTLVPGDLN----NLGVGNSGNANIGFGNAGVLNTGFGNA---SILNTGLGNAGELNTGF 418 ++ GD N N G NSGN N GF N+G LNTG N+ + N+G + G N+G+ Sbjct 515 -SMNTGDFNSGNVNTGYFNSGNINTGFFNSGDLNTGLFNSVNQPVQNSGWLHTGTNNSGY 573 Query 419 GNAGFVNTGFDNSGNVNTGN---GNSGNINTGSWNAGNVNTG-------------FGIIT 462 NAG N+GFDN+ GNSG N G++NAG +N G G Sbjct 574 ANAGTFNSGFDNNARDEHAEFVTGNSGLANVGNYNAGIINVGDHLSGFRNSVPTITGTAN 633 Query 463 DSGLTN---------------SGFGNTGTDVSGFFN 483 SG N SGF N +VSG+ N Sbjct 634 ISGFVNAGTSISGFFNFGSLMSGFANFDDEVSGYLN 669 >gi|121637470|ref|YP_977693.1| PPE family protein [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224989944|ref|YP_002644631.1| PPE family protein [Mycobacterium bovis BCG str. Tokyo 172] gi|253799397|ref|YP_003032398.1| PPE family protein [Mycobacterium tuberculosis KZN 1435] 23 more sequence titles Length=678 Score = 352 bits (903), Expect = 1e-94, Method: Compositional matrix adjust. Identities = 306/659 (47%), Positives = 378/659 (58%), Gaps = 117/659 (17%) Query 3 HFSVLPPEINSLRMYLGAGSAPMLQAAAAWDGLAAELGTAASSFSSVTTGLTGQAWQGPA 62 +FSVLPPEINS M+ GAG PML AA+AW GLA +LG+AA+SFS+VT+ L +WQGPA Sbjct 2 NFSVLPPEINSALMFAGAGPGPMLAAASAWTGLAGDLGSAAASFSAVTSQLATGSWQGPA 61 Query 63 SAAMAAAAAPYAGFLTTASAQAQLAAGQAKAVASVFEAAKAAIVPPAAVAANREAFLALI 122 SAAM AA YA +LTTA+AQA+ AAGQA+A S FEAA AA V P AV+ANR +L+ Sbjct 62 SAAMTGVAASYARWLTTAAAQAEQAAGQAQAAVSAFEAALAATVHPGAVSANRGRLRSLV 121 Query 123 RSNWLGLNAPWIAAVESLYEEYWAADVAAMTGYHAGASQAAAQL----PLPAGLQQ---- 174 SN LG NAP IAAVE++YE+ WAADVAAM GYH AS A L P P+ Sbjct 122 ASNLLGQNAPAIAAVEAVYEQMWAADVAAMLGYHGEASAVALSLTPFTPSPSAAATPGGA 181 Query 175 -------FLN-----------TLPNLGIGNQGNANLGGGNTGSGNIGN----------GN 206 FL+ NLG+GN G+ N G NTGS N+GN GN Sbjct 182 VIIAGFPFLDLGNVTIGGFNLASGNLGLGNLGSFNPGSANTGSVNLGNANIGDLNLGSGN 241 Query 207 KGSSNLGGGNIGNNNIGSGNRGSDNFGAGNVGTGNIGFGNQGPI--------DVNL---- 254 GS NLGGGN G+ N GSGN G+ N+G+GN+G+ N+G GN G D N Sbjct 242 IGSYNLGGGNTGDLNPGSGNTGTLNWGSGNIGSYNLGGGNLGSYNLGSGNTGDTNFGGGN 301 Query 255 -------LATPGQNNVGLGNIGNNNMGFGNTGDANTGGGNTGNGNIGGGNTGNNNFGFGN 307 G +N G GN GN N G GNTGD N G GN G+GNIG GN G++N GFGN Sbjct 302 TGNLNVGGGNTGNSNFGFGNTGNVNFGNGNTGDTNFGSGNLGSGNIGFGNKGSHNIGFGN 361 Query 308 TGNNNIGIGLTGNNQMGINLAGLLNSGSGNIGIGNSGTNNIGLFNSGSGNIGVFNT---- 363 +GNNNIG GLTG+NQ+G G LNSGSGN+G GNSG NIG FNSG+ NIG+ N+ Sbjct 362 SGNNNIGFGLTGDNQIGF---GALNSGSGNLGFGNSGNGNIGFFNSGNNNIGMGNSGNGV 418 Query 364 GANTLVPGD--LNNLGVGNSGNANIGFGNAGVL--------------------NTGFGNA 401 GA ++ G + G GNSG + G GN+G L NTG+ N+ Sbjct 419 GALSVEFGSSAERSSGFGNSGELSTGIGNSGQLSTGWFNSATTSTGWFNSGTTNTGWFNS 478 Query 402 SILNTGLG--------------NAGELNTGFGNAGFVNTGFDNSGNVNTGNGNSGNINTG 447 NTG+G N+G NTG NAG +NTG NSGNVNTG NSGNINTG Sbjct 479 GTTNTGIGNSGGNLVTGSMGLFNSGHTNTGSFNAGSMNTGDFNSGNVNTGYFNSGNINTG 538 Query 448 SWNAGNVNTGFGIITDSGLTNSGFGNTGTDVSGF-----FNTPTGPLAVDVSGFFNTASG 502 +N+G++NTG + + NSG+ +TGT+ SG+ FN+ A D F T + Sbjct 539 FFNSGDLNTGLFNSVNQPVQNSGWLHTGTNNSGYANAGTFNSGFDNNARDEHAEFVTGNS 598 Query 503 GTV-INGQTSGIGNIG---------VPGTLFGSVRSGLNTGLFNMGTAISGLFNLRQLL 551 G + +GI N+G VP T+ G+ +G N GT+ISG FN L+ Sbjct 599 GLANVGNYNAGIINVGDHLSGFRNSVP-TITGTANI---SGFVNAGTSISGFFNFGSLM 653 Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 160/396 (41%), Positives = 201/396 (51%), Gaps = 106/396 (26%) Query 181 NLGIGNQGNANLGGGNTGSGNIGNGNKGSSNLGGGNIGNNNIGSGNRGSDNFGAGNVGTG 240 NLG GN G+ N GGGNTG+ N+G GN G+SN G GN GN N G+GN G NFG+GN+G+G Sbjct 286 NLGSGNTGDTNFGGGNTGNLNVGGGNTGNSNFGFGNTGNVNFGNGNTGDTNFGSGNLGSG 345 Query 241 NIGFGNQGPIDVNLLATPGQNNVGLGNIGNNNMGFGNTGDANTGGG--NTGNGNIGGGNT 298 NIGFGN+G +N+G GN GNNN+GFG TGD G G N+G+GN+G GN+ Sbjct 346 NIGFGNKG-----------SHNIGFGNSGNNNIGFGLTGDNQIGFGALNSGSGNLGFGNS 394 Query 299 GNNNFGFGNTGNNNIGIGLTGNNQMGINLA------------------------------ 328 GN N GF N+GNNNIG+G +GN +++ Sbjct 395 GNGNIGFFNSGNNNIGMGNSGNGVGALSVEFGSSAERSSGFGNSGELSTGIGNSGQLSTG 454 Query 329 -------------------GLLNSGSGNIGIGNSG----TNNIGLFNSGSGNIGVFNTGA 365 G NSG+ N GIGNSG T ++GLFNSG N G FN G Sbjct 455 WFNSATTSTGWFNSGTTNTGWFNSGTTNTGIGNSGGNLVTGSMGLFNSGHTNTGSFNAG- 513 Query 366 NTLVPGDLN----NLGVGNSGNANIGFGNAGVLNTGFGNA---SILNTGLGNAGELNTGF 418 ++ GD N N G NSGN N GF N+G LNTG N+ + N+G + G N+G+ Sbjct 514 -SMNTGDFNSGNVNTGYFNSGNINTGFFNSGDLNTGLFNSVNQPVQNSGWLHTGTNNSGY 572 Query 419 GNAGFVNTGFDNSGNVNTGN---GNSGNINTGSWNAGNVNTG-------------FGIIT 462 NAG N+GFDN+ GNSG N G++NAG +N G G Sbjct 573 ANAGTFNSGFDNNARDEHAEFVTGNSGLANVGNYNAGIINVGDHLSGFRNSVPTITGTAN 632 Query 463 DSGLTN---------------SGFGNTGTDVSGFFN 483 SG N SGF N +VSG+ N Sbjct 633 ISGFVNAGTSISGFFNFGSLMSGFANFDDEVSGYLN 668 >gi|15841015|ref|NP_336052.1| PPE family protein [Mycobacterium tuberculosis CDC1551] gi|148822772|ref|YP_001287526.1| PPE family protein [Mycobacterium tuberculosis F11] gi|254231776|ref|ZP_04925103.1| PPE family protein [Mycobacterium tuberculosis C] 9 more sequence titles Length=760 Score = 352 bits (902), Expect = 1e-94, Method: Compositional matrix adjust. Identities = 306/661 (47%), Positives = 379/661 (58%), Gaps = 117/661 (17%) Query 1 MAHFSVLPPEINSLRMYLGAGSAPMLQAAAAWDGLAAELGTAASSFSSVTTGLTGQAWQG 60 + +FSVLPPEINS M+ GAG PML AA+AW GLA +LG+AA+SFS+VT+ L +WQG Sbjct 82 VMNFSVLPPEINSALMFAGAGPGPMLAAASAWTGLAGDLGSAAASFSAVTSQLATGSWQG 141 Query 61 PASAAMAAAAAPYAGFLTTASAQAQLAAGQAKAVASVFEAAKAAIVPPAAVAANREAFLA 120 PASAAM AA YA +LTTA+AQA+ AAGQA+A S FEAA AA V P AV+ANR + Sbjct 142 PASAAMTGVAASYARWLTTAAAQAEQAAGQAQAAVSAFEAALAATVHPGAVSANRGRLRS 201 Query 121 LIRSNWLGLNAPWIAAVESLYEEYWAADVAAMTGYHAGASQAAAQL----PLPA-----G 171 L+ SN LG NAP IAAVE++YE+ WAADVAAM GYH AS A L P P+ G Sbjct 202 LVASNLLGQNAPAIAAVEAVYEQMWAADVAAMLGYHGEASAVALSLTPFTPSPSAAATPG 261 Query 172 LQQFLNTLP-----------------NLGIGNQGNANLGGGNTGSGNIGN---------- 204 + P NLG+GN G+ N G NTGS N+GN Sbjct 262 GAVIIAGFPFLDLGNVTIGGFNLASGNLGLGNLGSFNPGSANTGSVNLGNANIGDLNLGS 321 Query 205 GNKGSSNLGGGNIGNNNIGSGNRGSDNFGAGNVGTGNIGFGNQGPI--------DVNL-- 254 GN GS NLGGGN G+ N GSGN G+ N+G+GN+G+ N+G GN G D N Sbjct 322 GNIGSYNLGGGNTGDLNPGSGNTGTLNWGSGNIGSYNLGGGNLGSYNLGSGNTGDTNFGG 381 Query 255 ---------LATPGQNNVGLGNIGNNNMGFGNTGDANTGGGNTGNGNIGGGNTGNNNFGF 305 G +N G GN GN N G GNTGD N G GN G+GNIG GN G++N GF Sbjct 382 GNTGNLNVGGGNTGNSNFGFGNTGNVNFGNGNTGDTNFGSGNLGSGNIGFGNKGSHNIGF 441 Query 306 GNTGNNNIGIGLTGNNQMGINLAGLLNSGSGNIGIGNSGTNNIGLFNSGSGNIGVFNT-- 363 GN+GNNNIG GLTG+NQ+G G LNSGSGN+G GNSG NIG FNSG+ NIG+ N+ Sbjct 442 GNSGNNNIGFGLTGDNQIGF---GALNSGSGNLGFGNSGNGNIGFFNSGNNNIGMGNSGN 498 Query 364 --GANTLVPGD--LNNLGVGNSGNANIGFGNAGVL--------------------NTGFG 399 GA ++ G + G GNSG + G GN+G L NTG+ Sbjct 499 GVGALSVEFGSSAERSSGFGNSGELSTGIGNSGQLSTGWFNSATTSTGWFNSGTTNTGWF 558 Query 400 NASILNTGLG--------------NAGELNTGFGNAGFVNTGFDNSGNVNTGNGNSGNIN 445 N+ NTG+G N+G NTG NAG +NTG NSGNVNTG NSGNIN Sbjct 559 NSGTTNTGIGNSGGNLVTGSMGLFNSGHTNTGSFNAGSMNTGDFNSGNVNTGYFNSGNIN 618 Query 446 TGSWNAGNVNTGFGIITDSGLTNSGFGNTGTDVSGF-----FNTPTGPLAVDVSGFFNTA 500 TG +N+G++NTG + + NSG+ +TGT+ SG+ FN+ A D F T Sbjct 619 TGFFNSGDLNTGLFNSVNQPVQNSGWLHTGTNNSGYANAGTFNSGFDNNARDEHAEFVTG 678 Query 501 SGGTV-INGQTSGIGNIG---------VPGTLFGSVRSGLNTGLFNMGTAISGLFNLRQL 550 + G + +GI N+G VP T+ G+ +G N GT+ISG FN L Sbjct 679 NSGLANVGNYNAGIINVGDHLSGFRNSVP-TITGTANI---SGFVNAGTSISGFFNFGSL 734 Query 551 L 551 + Sbjct 735 M 735 Score = 157 bits (397), Expect = 5e-36, Method: Compositional matrix adjust. Identities = 160/396 (41%), Positives = 201/396 (51%), Gaps = 106/396 (26%) Query 181 NLGIGNQGNANLGGGNTGSGNIGNGNKGSSNLGGGNIGNNNIGSGNRGSDNFGAGNVGTG 240 NLG GN G+ N GGGNTG+ N+G GN G+SN G GN GN N G+GN G NFG+GN+G+G Sbjct 368 NLGSGNTGDTNFGGGNTGNLNVGGGNTGNSNFGFGNTGNVNFGNGNTGDTNFGSGNLGSG 427 Query 241 NIGFGNQGPIDVNLLATPGQNNVGLGNIGNNNMGFGNTGDANTGGG--NTGNGNIGGGNT 298 NIGFGN+G +N+G GN GNNN+GFG TGD G G N+G+GN+G GN+ Sbjct 428 NIGFGNKG-----------SHNIGFGNSGNNNIGFGLTGDNQIGFGALNSGSGNLGFGNS 476 Query 299 GNNNFGFGNTGNNNIGIGLTGNNQMGINLA------------------------------ 328 GN N GF N+GNNNIG+G +GN +++ Sbjct 477 GNGNIGFFNSGNNNIGMGNSGNGVGALSVEFGSSAERSSGFGNSGELSTGIGNSGQLSTG 536 Query 329 -------------------GLLNSGSGNIGIGNSG----TNNIGLFNSGSGNIGVFNTGA 365 G NSG+ N GIGNSG T ++GLFNSG N G FN G Sbjct 537 WFNSATTSTGWFNSGTTNTGWFNSGTTNTGIGNSGGNLVTGSMGLFNSGHTNTGSFNAG- 595 Query 366 NTLVPGDLN----NLGVGNSGNANIGFGNAGVLNTGFGNA---SILNTGLGNAGELNTGF 418 ++ GD N N G NSGN N GF N+G LNTG N+ + N+G + G N+G+ Sbjct 596 -SMNTGDFNSGNVNTGYFNSGNINTGFFNSGDLNTGLFNSVNQPVQNSGWLHTGTNNSGY 654 Query 419 GNAGFVNTGFDNSGNVNTGN---GNSGNINTGSWNAGNVNTG-------------FGIIT 462 NAG N+GFDN+ GNSG N G++NAG +N G G Sbjct 655 ANAGTFNSGFDNNARDEHAEFVTGNSGLANVGNYNAGIINVGDHLSGFRNSVPTITGTAN 714 Query 463 DSGLTN---------------SGFGNTGTDVSGFFN 483 SG N SGF N +VSG+ N Sbjct 715 ISGFVNAGTSISGFFNFGSLMSGFANFDDEVSGYLN 750 >gi|254550567|ref|ZP_05141014.1| PPE family protein [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|297731103|ref|ZP_06960221.1| PPE family protein [Mycobacterium tuberculosis KZN R506] gi|298525060|ref|ZP_07012469.1| predicted protein [Mycobacterium tuberculosis 94_M4241A] gi|298494854|gb|EFI30148.1| predicted protein [Mycobacterium tuberculosis 94_M4241A] gi|339298158|gb|AEJ50268.1| PPE family protein [Mycobacterium tuberculosis CCDC5180] Length=681 Score = 351 bits (901), Expect = 1e-94, Method: Compositional matrix adjust. Identities = 306/661 (47%), Positives = 379/661 (58%), Gaps = 117/661 (17%) Query 1 MAHFSVLPPEINSLRMYLGAGSAPMLQAAAAWDGLAAELGTAASSFSSVTTGLTGQAWQG 60 + +FSVLPPEINS M+ GAG PML AA+AW GLA +LG+AA+SFS+VT+ L +WQG Sbjct 3 VMNFSVLPPEINSALMFAGAGPGPMLAAASAWTGLAGDLGSAAASFSAVTSQLATGSWQG 62 Query 61 PASAAMAAAAAPYAGFLTTASAQAQLAAGQAKAVASVFEAAKAAIVPPAAVAANREAFLA 120 PASAAM AA YA +LTTA+AQA+ AAGQA+A S FEAA AA V P AV+ANR + Sbjct 63 PASAAMTGVAASYARWLTTAAAQAEQAAGQAQAAVSAFEAALAATVHPGAVSANRGRLRS 122 Query 121 LIRSNWLGLNAPWIAAVESLYEEYWAADVAAMTGYHAGASQAAAQL----PLPA-----G 171 L+ SN LG NAP IAAVE++YE+ WAADVAAM GYH AS A L P P+ G Sbjct 123 LVASNLLGQNAPAIAAVEAVYEQMWAADVAAMLGYHGEASAVALSLTPFTPSPSAAATPG 182 Query 172 LQQFLNTLP-----------------NLGIGNQGNANLGGGNTGSGNIGN---------- 204 + P NLG+GN G+ N G NTGS N+GN Sbjct 183 GAVIIAGFPFLDLGNVTIGGFNLASGNLGLGNLGSFNPGSANTGSVNLGNANIGDLNLGS 242 Query 205 GNKGSSNLGGGNIGNNNIGSGNRGSDNFGAGNVGTGNIGFGNQGPI--------DVNL-- 254 GN GS NLGGGN G+ N GSGN G+ N+G+GN+G+ N+G GN G D N Sbjct 243 GNIGSYNLGGGNTGDLNPGSGNTGTLNWGSGNIGSYNLGGGNLGSYNLGSGNTGDTNFGG 302 Query 255 ---------LATPGQNNVGLGNIGNNNMGFGNTGDANTGGGNTGNGNIGGGNTGNNNFGF 305 G +N G GN GN N G GNTGD N G GN G+GNIG GN G++N GF Sbjct 303 GNTGNLNVGGGNTGNSNFGFGNTGNVNFGNGNTGDTNFGSGNLGSGNIGFGNKGSHNIGF 362 Query 306 GNTGNNNIGIGLTGNNQMGINLAGLLNSGSGNIGIGNSGTNNIGLFNSGSGNIGVFNT-- 363 GN+GNNNIG GLTG+NQ+G G LNSGSGN+G GNSG NIG FNSG+ NIG+ N+ Sbjct 363 GNSGNNNIGFGLTGDNQIGF---GALNSGSGNLGFGNSGNGNIGFFNSGNNNIGMGNSGN 419 Query 364 --GANTLVPGD--LNNLGVGNSGNANIGFGNAGVL--------------------NTGFG 399 GA ++ G + G GNSG + G GN+G L NTG+ Sbjct 420 GVGALSVEFGSSAERSSGFGNSGELSTGIGNSGQLSTGWFNSATTSTGWFNSGTTNTGWF 479 Query 400 NASILNTGLG--------------NAGELNTGFGNAGFVNTGFDNSGNVNTGNGNSGNIN 445 N+ NTG+G N+G NTG NAG +NTG NSGNVNTG NSGNIN Sbjct 480 NSGTTNTGIGNSGGNLVTGSMGLFNSGHTNTGSFNAGSMNTGDFNSGNVNTGYFNSGNIN 539 Query 446 TGSWNAGNVNTGFGIITDSGLTNSGFGNTGTDVSGF-----FNTPTGPLAVDVSGFFNTA 500 TG +N+G++NTG + + NSG+ +TGT+ SG+ FN+ A D F T Sbjct 540 TGFFNSGDLNTGLFNSVNQPVQNSGWLHTGTNNSGYANAGTFNSGFDNNARDEHAEFVTG 599 Query 501 SGGTV-INGQTSGIGNIG---------VPGTLFGSVRSGLNTGLFNMGTAISGLFNLRQL 550 + G + +GI N+G VP T+ G+ +G N GT+ISG FN L Sbjct 600 NSGLANVGNYNAGIINVGDHLSGFRNSVP-TITGTANI---SGFVNAGTSISGFFNFGSL 655 Query 551 L 551 + Sbjct 656 M 656 Score = 152 bits (384), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 160/396 (41%), Positives = 201/396 (51%), Gaps = 106/396 (26%) Query 181 NLGIGNQGNANLGGGNTGSGNIGNGNKGSSNLGGGNIGNNNIGSGNRGSDNFGAGNVGTG 240 NLG GN G+ N GGGNTG+ N+G GN G+SN G GN GN N G+GN G NFG+GN+G+G Sbjct 289 NLGSGNTGDTNFGGGNTGNLNVGGGNTGNSNFGFGNTGNVNFGNGNTGDTNFGSGNLGSG 348 Query 241 NIGFGNQGPIDVNLLATPGQNNVGLGNIGNNNMGFGNTGDANTGGG--NTGNGNIGGGNT 298 NIGFGN+G +N+G GN GNNN+GFG TGD G G N+G+GN+G GN+ Sbjct 349 NIGFGNKG-----------SHNIGFGNSGNNNIGFGLTGDNQIGFGALNSGSGNLGFGNS 397 Query 299 GNNNFGFGNTGNNNIGIGLTGNNQMGINLA------------------------------ 328 GN N GF N+GNNNIG+G +GN +++ Sbjct 398 GNGNIGFFNSGNNNIGMGNSGNGVGALSVEFGSSAERSSGFGNSGELSTGIGNSGQLSTG 457 Query 329 -------------------GLLNSGSGNIGIGNSG----TNNIGLFNSGSGNIGVFNTGA 365 G NSG+ N GIGNSG T ++GLFNSG N G FN G Sbjct 458 WFNSATTSTGWFNSGTTNTGWFNSGTTNTGIGNSGGNLVTGSMGLFNSGHTNTGSFNAG- 516 Query 366 NTLVPGDLN----NLGVGNSGNANIGFGNAGVLNTGFGNA---SILNTGLGNAGELNTGF 418 ++ GD N N G NSGN N GF N+G LNTG N+ + N+G + G N+G+ Sbjct 517 -SMNTGDFNSGNVNTGYFNSGNINTGFFNSGDLNTGLFNSVNQPVQNSGWLHTGTNNSGY 575 Query 419 GNAGFVNTGFDNSGNVNTGN---GNSGNINTGSWNAGNVNTG-------------FGIIT 462 NAG N+GFDN+ GNSG N G++NAG +N G G Sbjct 576 ANAGTFNSGFDNNARDEHAEFVTGNSGLANVGNYNAGIINVGDHLSGFRNSVPTITGTAN 635 Query 463 DSGLTN---------------SGFGNTGTDVSGFFN 483 SG N SGF N +VSG+ N Sbjct 636 ISGFVNAGTSISGFFNFGSLMSGFANFDDEVSGYLN 671 >gi|297634116|ref|ZP_06951896.1| PPE family protein [Mycobacterium tuberculosis KZN 4207] Length=687 Score = 351 bits (901), Expect = 2e-94, Method: Compositional matrix adjust. Identities = 306/661 (47%), Positives = 379/661 (58%), Gaps = 117/661 (17%) Query 1 MAHFSVLPPEINSLRMYLGAGSAPMLQAAAAWDGLAAELGTAASSFSSVTTGLTGQAWQG 60 + +FSVLPPEINS M+ GAG PML AA+AW GLA +LG+AA+SFS+VT+ L +WQG Sbjct 9 VMNFSVLPPEINSALMFAGAGPGPMLAAASAWTGLAGDLGSAAASFSAVTSQLATGSWQG 68 Query 61 PASAAMAAAAAPYAGFLTTASAQAQLAAGQAKAVASVFEAAKAAIVPPAAVAANREAFLA 120 PASAAM AA YA +LTTA+AQA+ AAGQA+A S FEAA AA V P AV+ANR + Sbjct 69 PASAAMTGVAASYARWLTTAAAQAEQAAGQAQAAVSAFEAALAATVHPGAVSANRGRLRS 128 Query 121 LIRSNWLGLNAPWIAAVESLYEEYWAADVAAMTGYHAGASQAAAQL----PLPAGLQQ-- 174 L+ SN LG NAP IAAVE++YE+ WAADVAAM GYH AS A L P P+ Sbjct 129 LVASNLLGQNAPAIAAVEAVYEQMWAADVAAMLGYHGEASAVALSLTPFTPSPSAAATPG 188 Query 175 ---------FLN-----------TLPNLGIGNQGNANLGGGNTGSGNIGN---------- 204 FL+ NLG+GN G+ N G NTGS N+GN Sbjct 189 GAVIIAGFPFLDLGNVTIGGFNLASGNLGLGNLGSFNPGSANTGSVNLGNANIGDLNLGS 248 Query 205 GNKGSSNLGGGNIGNNNIGSGNRGSDNFGAGNVGTGNIGFGNQGPI--------DVNL-- 254 GN GS NLGGGN G+ N GSGN G+ N+G+GN+G+ N+G GN G D N Sbjct 249 GNIGSYNLGGGNTGDLNPGSGNTGTLNWGSGNIGSYNLGGGNLGSYNLGSGNTGDTNFGG 308 Query 255 ---------LATPGQNNVGLGNIGNNNMGFGNTGDANTGGGNTGNGNIGGGNTGNNNFGF 305 G +N G GN GN N G GNTGD N G GN G+GNIG GN G++N GF Sbjct 309 GNTGNLNVGGGNTGNSNFGFGNTGNVNFGNGNTGDTNFGSGNLGSGNIGFGNKGSHNIGF 368 Query 306 GNTGNNNIGIGLTGNNQMGINLAGLLNSGSGNIGIGNSGTNNIGLFNSGSGNIGVFNT-- 363 GN+GNNNIG GLTG+NQ+G G LNSGSGN+G GNSG NIG FNSG+ NIG+ N+ Sbjct 369 GNSGNNNIGFGLTGDNQIGF---GALNSGSGNLGFGNSGNGNIGFFNSGNNNIGMGNSGN 425 Query 364 --GANTLVPGD--LNNLGVGNSGNANIGFGNAGVL--------------------NTGFG 399 GA ++ G + G GNSG + G GN+G L NTG+ Sbjct 426 GVGALSVEFGSSAERSSGFGNSGELSTGIGNSGQLSTGWFNSATTSTGWFNSGTTNTGWF 485 Query 400 NASILNTGLG--------------NAGELNTGFGNAGFVNTGFDNSGNVNTGNGNSGNIN 445 N+ NTG+G N+G NTG NAG +NTG NSGNVNTG NSGNIN Sbjct 486 NSGTTNTGIGNSGGNLVTGSMGLFNSGHTNTGSFNAGSMNTGDFNSGNVNTGYFNSGNIN 545 Query 446 TGSWNAGNVNTGFGIITDSGLTNSGFGNTGTDVSGF-----FNTPTGPLAVDVSGFFNTA 500 TG +N+G++NTG + + NSG+ +TGT+ SG+ FN+ A D F T Sbjct 546 TGFFNSGDLNTGLFNSVNQPVQNSGWLHTGTNNSGYANAGTFNSGFDNNARDEHAEFVTG 605 Query 501 SGGTV-INGQTSGIGNIG---------VPGTLFGSVRSGLNTGLFNMGTAISGLFNLRQL 550 + G + +GI N+G VP T+ G+ +G N GT+ISG FN L Sbjct 606 NSGLANVGNYNAGIINVGDHLSGFRNSVP-TITGTANI---SGFVNAGTSISGFFNFGSL 661 Query 551 L 551 + Sbjct 662 M 662 Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 160/396 (41%), Positives = 201/396 (51%), Gaps = 106/396 (26%) Query 181 NLGIGNQGNANLGGGNTGSGNIGNGNKGSSNLGGGNIGNNNIGSGNRGSDNFGAGNVGTG 240 NLG GN G+ N GGGNTG+ N+G GN G+SN G GN GN N G+GN G NFG+GN+G+G Sbjct 295 NLGSGNTGDTNFGGGNTGNLNVGGGNTGNSNFGFGNTGNVNFGNGNTGDTNFGSGNLGSG 354 Query 241 NIGFGNQGPIDVNLLATPGQNNVGLGNIGNNNMGFGNTGDANTGGG--NTGNGNIGGGNT 298 NIGFGN+G +N+G GN GNNN+GFG TGD G G N+G+GN+G GN+ Sbjct 355 NIGFGNKG-----------SHNIGFGNSGNNNIGFGLTGDNQIGFGALNSGSGNLGFGNS 403 Query 299 GNNNFGFGNTGNNNIGIGLTGNNQMGINLA------------------------------ 328 GN N GF N+GNNNIG+G +GN +++ Sbjct 404 GNGNIGFFNSGNNNIGMGNSGNGVGALSVEFGSSAERSSGFGNSGELSTGIGNSGQLSTG 463 Query 329 -------------------GLLNSGSGNIGIGNSG----TNNIGLFNSGSGNIGVFNTGA 365 G NSG+ N GIGNSG T ++GLFNSG N G FN G Sbjct 464 WFNSATTSTGWFNSGTTNTGWFNSGTTNTGIGNSGGNLVTGSMGLFNSGHTNTGSFNAG- 522 Query 366 NTLVPGDLN----NLGVGNSGNANIGFGNAGVLNTGFGNA---SILNTGLGNAGELNTGF 418 ++ GD N N G NSGN N GF N+G LNTG N+ + N+G + G N+G+ Sbjct 523 -SMNTGDFNSGNVNTGYFNSGNINTGFFNSGDLNTGLFNSVNQPVQNSGWLHTGTNNSGY 581 Query 419 GNAGFVNTGFDNSGNVNTGN---GNSGNINTGSWNAGNVNTG-------------FGIIT 462 NAG N+GFDN+ GNSG N G++NAG +N G G Sbjct 582 ANAGTFNSGFDNNARDEHAEFVTGNSGLANVGNYNAGIINVGDHLSGFRNSVPTITGTAN 641 Query 463 DSGLTN---------------SGFGNTGTDVSGFFN 483 SG N SGF N +VSG+ N Sbjct 642 ISGFVNAGTSISGFFNFGSLMSGFANFDDEVSGYLN 677 >gi|306779561|ref|ZP_07417898.1| PPE family protein [Mycobacterium tuberculosis SUMu002] gi|306784292|ref|ZP_07422614.1| PPE family protein [Mycobacterium tuberculosis SUMu003] gi|306967658|ref|ZP_07480319.1| PPE family protein [Mycobacterium tuberculosis SUMu009] gi|308371996|ref|ZP_07426982.2| PPE family protein [Mycobacterium tuberculosis SUMu004] gi|308327495|gb|EFP16346.1| PPE family protein [Mycobacterium tuberculosis SUMu002] gi|308330957|gb|EFP19808.1| PPE family protein [Mycobacterium tuberculosis SUMu003] gi|308334778|gb|EFP23629.1| PPE family protein [Mycobacterium tuberculosis SUMu004] gi|308354717|gb|EFP43568.1| PPE family protein [Mycobacterium tuberculosis SUMu009] Length=681 Score = 350 bits (898), Expect = 4e-94, Method: Compositional matrix adjust. Identities = 281/574 (49%), Positives = 352/574 (62%), Gaps = 83/574 (14%) Query 1 MAHFSVLPPEINSLRMYLGAGSAPMLQAAAAWDGLAAELGTAASSFSSVTTGLTGQAWQG 60 + +FSVLPPEINS M+ GAG PML AA+AW GLA +LG+AA+SFS+VT+ L +WQG Sbjct 3 VMNFSVLPPEINSALMFAGAGPGPMLAAASAWTGLAGDLGSAAASFSAVTSQLATGSWQG 62 Query 61 PASAAMAAAAAPYAGFLTTASAQAQLAAGQAKAVASVFEAAKAAIVPPAAVAANREAFLA 120 PASAAM AA YA +LTTA+AQA+ AAGQA+A S FEAA AA V P AV+ANR + Sbjct 63 PASAAMTGVAASYARWLTTAAAQAEQAAGQAQAAVSAFEAALAATVHPGAVSANRGRLRS 122 Query 121 LIRSNWLGLNAPWIAAVESLYEEYWAADVAAMTGYHAGASQAAAQL----PLPAGLQQ-- 174 L+ SN LG NAP IAAVE++YE+ WAADVAAM GYH AS A L P P+ Sbjct 123 LVASNLLGQNAPAIAAVEAVYEQMWAADVAAMLGYHGEASAVALSLTPFTPSPSAAATPG 182 Query 175 ---------FLN-----------TLPNLGIGNQGNANLGGGNTGSGNIGN---------- 204 FL+ NLG+GN G+ N G NTGS N+GN Sbjct 183 GAVIIAGFPFLDLGNVTIGGFNLASGNLGLGNLGSFNPGSANTGSVNLGNANIGDLNLGS 242 Query 205 GNKGSSNLGGGNIGNNNIGSGNRGSDNFGAGNVGTGNIGFGNQGPI--------DVNL-- 254 GN GS NLGGGN G+ N GSGN G+ N+G+GN+G+ N+G GN G D N Sbjct 243 GNIGSYNLGGGNTGDLNPGSGNTGTLNWGSGNIGSYNLGGGNLGSYNLGSGNTGDTNFGG 302 Query 255 ---------LATPGQNNVGLGNIGNNNMGFGNTGDANTGGGNTGNGNIGGGNTGNNNFGF 305 G +N G GN GN N G GNTGD N G GN G+GNIG GN G++N GF Sbjct 303 GNTGNLNVGGGNTGNSNFGFGNTGNVNFGNGNTGDTNFGSGNLGSGNIGFGNKGSHNIGF 362 Query 306 GNTGNNNIGIGLTGNNQMGINLAGLLNSGSGNIGIGNSGTNNIGLFNSGSGNIGVFNT-- 363 GN+GNNNIG GLTG+NQ+G G LNSGSGN+G GNSG NIG FNSG+ NIG+ N+ Sbjct 363 GNSGNNNIGFGLTGDNQIGF---GALNSGSGNLGFGNSGNGNIGFFNSGNNNIGMGNSGN 419 Query 364 --GANTLVPGD--LNNLGVGNSGNANIGFGNAGVLNTGFGNASILNTGLGNAGELNTGFG 419 GA ++ G + G GNSG + G GN+G L+TG+ N++ +TG N+G NTG+ Sbjct 420 GVGALSVEFGSSAERSSGFGNSGELSTGIGNSGQLSTGWFNSATTSTGWFNSGTTNTGWF 479 Query 420 NAGFVNTGFD--------------NSGNVNTGNGNSGNINTGSWNAGNVNTGFGIITDSG 465 N+G NTG NSG+ NTG+ N+G++NTG +N+GNVNTG+ +SG Sbjct 480 NSGTTNTGIGNSGGNLVTGSMGLFNSGHTNTGSFNAGSMNTGDFNSGNVNTGY---FNSG 536 Query 466 LTNSGFGNTGTDVSGFFNTPTGPLAVDVSGFFNT 499 N+GF N+G +G FN+ P V SG+ +T Sbjct 537 NINTGFFNSGDLNTGLFNSVNQP--VQNSGWLHT 568 Score = 152 bits (383), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 161/396 (41%), Positives = 203/396 (52%), Gaps = 106/396 (26%) Query 181 NLGIGNQGNANLGGGNTGSGNIGNGNKGSSNLGGGNIGNNNIGSGNRGSDNFGAGNVGTG 240 NLG GN G+ N GGGNTG+ N+G GN G+SN G GN GN N G+GN G NFG+GN+G+G Sbjct 289 NLGSGNTGDTNFGGGNTGNLNVGGGNTGNSNFGFGNTGNVNFGNGNTGDTNFGSGNLGSG 348 Query 241 NIGFGNQGPIDVNLLATPGQNNVGLGNIGNNNMGFGNTGDANTGGG--NTGNGNIGGGNT 298 NIGFGN+G +N+G GN GNNN+GFG TGD G G N+G+GN+G GN+ Sbjct 349 NIGFGNKG-----------SHNIGFGNSGNNNIGFGLTGDNQIGFGALNSGSGNLGFGNS 397 Query 299 GNNNFGFGNTGNNNIGIGLTGNNQMGINLA------------------------------ 328 GN N GF N+GNNNIG+G +GN +++ Sbjct 398 GNGNIGFFNSGNNNIGMGNSGNGVGALSVEFGSSAERSSGFGNSGELSTGIGNSGQLSTG 457 Query 329 -------------------GLLNSGSGNIGIGNSG----TNNIGLFNSGSGNIGVFNTGA 365 G NSG+ N GIGNSG T ++GLFNSG N G FN G Sbjct 458 WFNSATTSTGWFNSGTTNTGWFNSGTTNTGIGNSGGNLVTGSMGLFNSGHTNTGSFNAG- 516 Query 366 NTLVPGDLN----NLGVGNSGNANIGFGNAGVLNTGFGNA---SILNTGLGNAGELNTGF 418 ++ GD N N G NSGN N GF N+G LNTG N+ + N+G + G N+G+ Sbjct 517 -SMNTGDFNSGNVNTGYFNSGNINTGFFNSGDLNTGLFNSVNQPVQNSGWLHTGTNNSGY 575 Query 419 GNAGFVNTGFDNSGNVNTGN---GNSGNINTGSWNAGNVN-----TGF--------GIIT 462 NAG N+GFDN+ GNSG N G++NAG +N +GF G Sbjct 576 ANAGTFNSGFDNNARDEHAEFVTGNSGLANVGNYNAGIINVDDHLSGFRNSVPTITGTAN 635 Query 463 DSGLTN---------------SGFGNTGTDVSGFFN 483 SG N SGF N +VSG+ N Sbjct 636 ISGFVNAGTSISGFFNFGSLMSGFANFDDEVSGYLN 671 >gi|340626569|ref|YP_004745021.1| PPE family protein [Mycobacterium canettii CIPT 140010059] gi|340004759|emb|CCC43903.1| PPE family protein [Mycobacterium canettii CIPT 140010059] Length=678 Score = 350 bits (897), Expect = 5e-94, Method: Compositional matrix adjust. Identities = 304/659 (47%), Positives = 378/659 (58%), Gaps = 117/659 (17%) Query 3 HFSVLPPEINSLRMYLGAGSAPMLQAAAAWDGLAAELGTAASSFSSVTTGLTGQAWQGPA 62 +FSVLPPEINS M+ GAG PML AA+AW GLA +LG+AA++FS+VT+ L +WQGPA Sbjct 2 NFSVLPPEINSALMFAGAGPGPMLAAASAWTGLAGDLGSAAAAFSAVTSQLATGSWQGPA 61 Query 63 SAAMAAAAAPYAGFLTTASAQAQLAAGQAKAVASVFEAAKAAIVPPAAVAANREAFLALI 122 SAAM AA YA +LTTA+AQA+ AAGQA+A S FE A AA V P AV+ANR +L+ Sbjct 62 SAAMTGVAASYARWLTTAAAQAEQAAGQAQAAVSAFEEALAATVHPGAVSANRGRLRSLV 121 Query 123 RSNWLGLNAPWIAAVESLYEEYWAADVAAMTGYHAGASQAAAQL----PLPA-----GLQ 173 SN LG NAP IAAVE++YE+ WAADVAAM GYH AS A L P P+ G Sbjct 122 ASNLLGQNAPAIAAVEAVYEQMWAADVAAMLGYHGEASAVALSLTPFTPSPSAAATPGGA 181 Query 174 QFLNTLP-----------------NLGIGNQGNANLGGGNTGSG----------NIGNGN 206 + P NLG+GN G+ NLG NTGS N+G+GN Sbjct 182 VIIAGFPFLDLGNVTIGGFNLASGNLGLGNLGSFNLGSANTGSVNLGSANIGDLNLGSGN 241 Query 207 KGSSNLGGGNIGNNNIGSGNRGSDNFGAGNVGTGNIGFGNQGPI--------DVNL---- 254 GS NLGGGN G+ N GSGN G+ N+G+GN+G+ N+G GN G D N Sbjct 242 IGSYNLGGGNTGDLNPGSGNTGTLNWGSGNIGSYNLGGGNLGSYNLGSGNTGDTNFGGGN 301 Query 255 -------LATPGQNNVGLGNIGNNNMGFGNTGDANTGGGNTGNGNIGGGNTGNNNFGFGN 307 G +N G GN GN N G GNTGD N G GN G+GNIG GN G++N GFGN Sbjct 302 TGNLNVGGGNTGNSNFGFGNTGNVNFGNGNTGDTNFGSGNLGSGNIGFGNKGSHNIGFGN 361 Query 308 TGNNNIGIGLTGNNQMGINLAGLLNSGSGNIGIGNSGTNNIGLFNSGSGNIGVFNT---- 363 +GNNNIG GLTG+NQ+G G LNSGSGN+G GNSG NIG FNSG+ NIG+ N+ Sbjct 362 SGNNNIGFGLTGDNQIGF---GALNSGSGNLGFGNSGNGNIGFFNSGNNNIGMGNSGNGV 418 Query 364 GANTLVPGD--LNNLGVGNSGNANIGFGNAGVL--------------------NTGFGNA 401 GA ++ G + G GNSG + G GN+G L NTG+ N+ Sbjct 419 GALSVEFGSSAERSSGFGNSGELSTGIGNSGQLSTGWFNSATTSTGWFNSGTTNTGWFNS 478 Query 402 SILNTGLG--------------NAGELNTGFGNAGFVNTGFDNSGNVNTGNGNSGNINTG 447 NTG+G N+G NTG NAG +NTG NSGNVNTG NSGNINTG Sbjct 479 GTTNTGIGNSGGNLVTGSMGLFNSGHTNTGSFNAGSMNTGDFNSGNVNTGYFNSGNINTG 538 Query 448 SWNAGNVNTGFGIITDSGLTNSGFGNTGTDVSGF-----FNTPTGPLAVDVSGFFNTASG 502 +N+G++NTG + + NSG+ +TGT+ SG+ FN+ A D F T + Sbjct 539 FFNSGDLNTGLFNSVNQPVQNSGWLHTGTNNSGYANAGTFNSGFDNNARDEHAEFVTGNS 598 Query 503 GTV-INGQTSGIGNIG---------VPGTLFGSVRSGLNTGLFNMGTAISGLFNLRQLL 551 G + +GI N+G VP T+ G+ +G N GT+ISG FN L+ Sbjct 599 GLANVGNYNAGIINVGDHLSGFRNSVP-TITGTANI---SGFVNAGTSISGFFNFGSLM 653 Score = 152 bits (384), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 160/396 (41%), Positives = 201/396 (51%), Gaps = 106/396 (26%) Query 181 NLGIGNQGNANLGGGNTGSGNIGNGNKGSSNLGGGNIGNNNIGSGNRGSDNFGAGNVGTG 240 NLG GN G+ N GGGNTG+ N+G GN G+SN G GN GN N G+GN G NFG+GN+G+G Sbjct 286 NLGSGNTGDTNFGGGNTGNLNVGGGNTGNSNFGFGNTGNVNFGNGNTGDTNFGSGNLGSG 345 Query 241 NIGFGNQGPIDVNLLATPGQNNVGLGNIGNNNMGFGNTGDANTGGG--NTGNGNIGGGNT 298 NIGFGN+G +N+G GN GNNN+GFG TGD G G N+G+GN+G GN+ Sbjct 346 NIGFGNKG-----------SHNIGFGNSGNNNIGFGLTGDNQIGFGALNSGSGNLGFGNS 394 Query 299 GNNNFGFGNTGNNNIGIGLTGNNQMGINLA------------------------------ 328 GN N GF N+GNNNIG+G +GN +++ Sbjct 395 GNGNIGFFNSGNNNIGMGNSGNGVGALSVEFGSSAERSSGFGNSGELSTGIGNSGQLSTG 454 Query 329 -------------------GLLNSGSGNIGIGNSG----TNNIGLFNSGSGNIGVFNTGA 365 G NSG+ N GIGNSG T ++GLFNSG N G FN G Sbjct 455 WFNSATTSTGWFNSGTTNTGWFNSGTTNTGIGNSGGNLVTGSMGLFNSGHTNTGSFNAG- 513 Query 366 NTLVPGDLN----NLGVGNSGNANIGFGNAGVLNTGFGNA---SILNTGLGNAGELNTGF 418 ++ GD N N G NSGN N GF N+G LNTG N+ + N+G + G N+G+ Sbjct 514 -SMNTGDFNSGNVNTGYFNSGNINTGFFNSGDLNTGLFNSVNQPVQNSGWLHTGTNNSGY 572 Query 419 GNAGFVNTGFDNSGNVNTGN---GNSGNINTGSWNAGNVNTG-------------FGIIT 462 NAG N+GFDN+ GNSG N G++NAG +N G G Sbjct 573 ANAGTFNSGFDNNARDEHAEFVTGNSGLANVGNYNAGIINVGDHLSGFRNSVPTITGTAN 632 Query 463 DSGLTN---------------SGFGNTGTDVSGFFN 483 SG N SGF N +VSG+ N Sbjct 633 ISGFVNAGTSISGFFNFGSLMSGFANFDDEVSGYLN 668 >gi|57116882|ref|YP_177817.1| PPE family protein [Mycobacterium tuberculosis H37Rv] gi|148661344|ref|YP_001282867.1| PPE family protein [Mycobacterium tuberculosis H37Ra] gi|6136475|sp|Q10778.2|PPE21_MYCTU RecName: Full=Uncharacterized PPE family protein PPE21 gi|38684031|emb|CAE55401.1| PPE FAMILY PROTEIN [Mycobacterium tuberculosis H37Rv] gi|148505496|gb|ABQ73305.1| PPE family protein [Mycobacterium tuberculosis H37Ra] Length=678 Score = 350 bits (897), Expect = 5e-94, Method: Compositional matrix adjust. Identities = 304/659 (47%), Positives = 377/659 (58%), Gaps = 117/659 (17%) Query 3 HFSVLPPEINSLRMYLGAGSAPMLQAAAAWDGLAAELGTAASSFSSVTTGLTGQAWQGPA 62 +FSVLPPEINS M+ GAG PML AA+AW GLA +LG+AA+SFS+VT+ L +WQGPA Sbjct 2 NFSVLPPEINSALMFAGAGPGPMLAAASAWTGLAGDLGSAAASFSAVTSQLATGSWQGPA 61 Query 63 SAAMAAAAAPYAGFLTTASAQAQLAAGQAKAVASVFEAAKAAIVPPAAVAANREAFLALI 122 SAAM AA YA +LTTA+AQA+ AAGQA+A S FEAA AA V P AV+ANR +L+ Sbjct 62 SAAMTGVAASYARWLTTAAAQAEQAAGQAQAAVSAFEAALAATVHPGAVSANRGRLRSLV 121 Query 123 RSNWLGLNAPWIAAVESLYEEYWAADVAAMTGYHAGASQAAAQL----PLPAGLQQ---- 174 SN LG NAP IAAVE++YE+ WAADVAAM GYH AS A L P P+ Sbjct 122 ASNLLGQNAPAIAAVEAVYEQMWAADVAAMLGYHGEASAVALSLTPFTPSPSAAATPGGA 181 Query 175 -------FLN-----------TLPNLGIGNQGNANLGGGNTGSGNIGNGNKGSSNLGGGN 216 FL+ NLG+GN G+ N G NTGS N+GN N G NLG GN Sbjct 182 VIIAGFPFLDLGNVTIGGFNLASGNLGLGNLGSFNPGSANTGSVNLGNANIGDLNLGSGN 241 Query 217 IGNNNIG----------SGNRGSDNFGAGNVGTGNIGFGNQGPI--------DVNL---- 254 IG+ N+G SGN G+ N+G+GN+G+ N+G GN G D N Sbjct 242 IGSYNLGGGNTGDLNPDSGNTGTLNWGSGNIGSYNLGGGNLGSYNLGSGNTGDTNFGGGN 301 Query 255 -------LATPGQNNVGLGNIGNNNMGFGNTGDANTGGGNTGNGNIGGGNTGNNNFGFGN 307 G +N G GN GN N G GNTGD N G GN G+GNIG GN G++N GFGN Sbjct 302 TGNLNVGGGNTGNSNFGFGNTGNVNFGNGNTGDTNFGSGNLGSGNIGFGNKGSHNIGFGN 361 Query 308 TGNNNIGIGLTGNNQMGINLAGLLNSGSGNIGIGNSGTNNIGLFNSGSGNIGVFNT---- 363 +GNNNIG GLTG+NQ+G G LNSGSGN+G GNSG NIG FNSG+ NIG+ N+ Sbjct 362 SGNNNIGFGLTGDNQIGF---GALNSGSGNLGFGNSGNGNIGFFNSGNNNIGMGNSGNGV 418 Query 364 GANTLVPGD--LNNLGVGNSGNANIGFGNAGVL--------------------NTGFGNA 401 GA ++ G + G GNSG + G GN+G L NTG+ N+ Sbjct 419 GALSVEFGSSAERSSGFGNSGELSTGIGNSGQLSTGWFNSATTSTGWFNSGTTNTGWFNS 478 Query 402 SILNTGLG--------------NAGELNTGFGNAGFVNTGFDNSGNVNTGNGNSGNINTG 447 NTG+G N+G NTG NAG +NTG NSGNVNTG NSGNINTG Sbjct 479 GTTNTGIGNSGGNLVTGSMGLFNSGHTNTGSFNAGSMNTGDFNSGNVNTGYFNSGNINTG 538 Query 448 SWNAGNVNTGFGIITDSGLTNSGFGNTGTDVSGF-----FNTPTGPLAVDVSGFFNTASG 502 +N+G++NTG + + NSG+ +TGT+ SG+ FN+ A D F T + Sbjct 539 FFNSGDLNTGLFNSVNQPVQNSGWLHTGTNNSGYANAGTFNSGFDNNARDEHAEFVTGNS 598 Query 503 GTV-INGQTSGIGNIG---------VPGTLFGSVRSGLNTGLFNMGTAISGLFNLRQLL 551 G + +GI N+G VP T+ G+ +G N GT+ISG FN L+ Sbjct 599 GLANVGNYNAGIINVGDHLSGFRNSVP-TITGTANI---SGFVNAGTSISGFFNFGSLM 653 Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 160/396 (41%), Positives = 201/396 (51%), Gaps = 106/396 (26%) Query 181 NLGIGNQGNANLGGGNTGSGNIGNGNKGSSNLGGGNIGNNNIGSGNRGSDNFGAGNVGTG 240 NLG GN G+ N GGGNTG+ N+G GN G+SN G GN GN N G+GN G NFG+GN+G+G Sbjct 286 NLGSGNTGDTNFGGGNTGNLNVGGGNTGNSNFGFGNTGNVNFGNGNTGDTNFGSGNLGSG 345 Query 241 NIGFGNQGPIDVNLLATPGQNNVGLGNIGNNNMGFGNTGDANTGGG--NTGNGNIGGGNT 298 NIGFGN+G +N+G GN GNNN+GFG TGD G G N+G+GN+G GN+ Sbjct 346 NIGFGNKG-----------SHNIGFGNSGNNNIGFGLTGDNQIGFGALNSGSGNLGFGNS 394 Query 299 GNNNFGFGNTGNNNIGIGLTGNNQMGINLA------------------------------ 328 GN N GF N+GNNNIG+G +GN +++ Sbjct 395 GNGNIGFFNSGNNNIGMGNSGNGVGALSVEFGSSAERSSGFGNSGELSTGIGNSGQLSTG 454 Query 329 -------------------GLLNSGSGNIGIGNSG----TNNIGLFNSGSGNIGVFNTGA 365 G NSG+ N GIGNSG T ++GLFNSG N G FN G Sbjct 455 WFNSATTSTGWFNSGTTNTGWFNSGTTNTGIGNSGGNLVTGSMGLFNSGHTNTGSFNAG- 513 Query 366 NTLVPGDLN----NLGVGNSGNANIGFGNAGVLNTGFGNA---SILNTGLGNAGELNTGF 418 ++ GD N N G NSGN N GF N+G LNTG N+ + N+G + G N+G+ Sbjct 514 -SMNTGDFNSGNVNTGYFNSGNINTGFFNSGDLNTGLFNSVNQPVQNSGWLHTGTNNSGY 572 Query 419 GNAGFVNTGFDNSGNVNTGN---GNSGNINTGSWNAGNVNTG-------------FGIIT 462 NAG N+GFDN+ GNSG N G++NAG +N G G Sbjct 573 ANAGTFNSGFDNNARDEHAEFVTGNSGLANVGNYNAGIINVGDHLSGFRNSVPTITGTAN 632 Query 463 DSGLTN---------------SGFGNTGTDVSGFFN 483 SG N SGF N +VSG+ N Sbjct 633 ISGFVNAGTSISGFFNFGSLMSGFANFDDEVSGYLN 668 >gi|306775737|ref|ZP_07414074.1| PPE family protein [Mycobacterium tuberculosis SUMu001] gi|307084126|ref|ZP_07493239.1| PPE family protein [Mycobacterium tuberculosis SUMu012] gi|308380110|ref|ZP_07488731.2| PPE family protein [Mycobacterium tuberculosis SUMu011] gi|308215829|gb|EFO75228.1| PPE family protein [Mycobacterium tuberculosis SUMu001] gi|308362583|gb|EFP51434.1| PPE family protein [Mycobacterium tuberculosis SUMu011] gi|308366248|gb|EFP55099.1| PPE family protein [Mycobacterium tuberculosis SUMu012] Length=681 Score = 350 bits (897), Expect = 6e-94, Method: Compositional matrix adjust. Identities = 304/661 (46%), Positives = 378/661 (58%), Gaps = 117/661 (17%) Query 1 MAHFSVLPPEINSLRMYLGAGSAPMLQAAAAWDGLAAELGTAASSFSSVTTGLTGQAWQG 60 + +FSVLPPEINS M+ GAG PML AA+AW GLA +LG+AA+SFS+VT+ L +WQG Sbjct 3 VMNFSVLPPEINSALMFAGAGPGPMLAAASAWTGLAGDLGSAAASFSAVTSQLATGSWQG 62 Query 61 PASAAMAAAAAPYAGFLTTASAQAQLAAGQAKAVASVFEAAKAAIVPPAAVAANREAFLA 120 PASAAM AA YA +LTTA+AQA+ AAGQA+A S FEAA AA V P AV+ANR + Sbjct 63 PASAAMTGVAASYARWLTTAAAQAEQAAGQAQAAVSAFEAALAATVHPGAVSANRGRLRS 122 Query 121 LIRSNWLGLNAPWIAAVESLYEEYWAADVAAMTGYHAGASQAAAQL----PLPAGLQQ-- 174 L+ SN LG NAP IAAVE++YE+ WAADVAAM GYH AS A L P P+ Sbjct 123 LVASNLLGQNAPAIAAVEAVYEQMWAADVAAMLGYHGEASAVALSLTPFTPSPSAAATPG 182 Query 175 ---------FLN-----------TLPNLGIGNQGNANLGGGNTGSGNIGNGNKGSSNLGG 214 FL+ NLG+GN G+ N G NTGS N+GN N G NLG Sbjct 183 GAVIIAGFPFLDLGNVTIGGFNLASGNLGLGNLGSFNPGSANTGSVNLGNANIGDLNLGS 242 Query 215 GNIGNNNIG----------SGNRGSDNFGAGNVGTGNIGFGNQGPI--------DVNL-- 254 GNIG+ N+G SGN G+ N+G+GN+G+ N+G GN G D N Sbjct 243 GNIGSYNLGGGNTGDLNPDSGNTGTLNWGSGNIGSYNLGGGNLGSYNLGSGNTGDTNFGG 302 Query 255 ---------LATPGQNNVGLGNIGNNNMGFGNTGDANTGGGNTGNGNIGGGNTGNNNFGF 305 G +N G GN GN N G GNTGD N G GN G+GNIG GN G++N GF Sbjct 303 GNTGNLNVGGGNTGNSNFGFGNTGNVNFGNGNTGDTNFGSGNLGSGNIGFGNKGSHNIGF 362 Query 306 GNTGNNNIGIGLTGNNQMGINLAGLLNSGSGNIGIGNSGTNNIGLFNSGSGNIGVFNT-- 363 GN+GNNNIG GLTG+NQ+G G LNSGSGN+G GNSG NIG FNSG+ NIG+ N+ Sbjct 363 GNSGNNNIGFGLTGDNQIGF---GALNSGSGNLGFGNSGNGNIGFFNSGNNNIGMGNSGN 419 Query 364 --GANTLVPGD--LNNLGVGNSGNANIGFGNAGVL--------------------NTGFG 399 GA ++ G + G GNSG + G GN+G L NTG+ Sbjct 420 GVGALSVEFGSSAERSSGFGNSGELSTGIGNSGQLSTGWFNSATTSTGWFNSGTTNTGWF 479 Query 400 NASILNTGLG--------------NAGELNTGFGNAGFVNTGFDNSGNVNTGNGNSGNIN 445 N+ NTG+G N+G NTG NAG +NTG NSGNVNTG NSGNIN Sbjct 480 NSGTTNTGIGNSGGNLVTGSMGLFNSGHTNTGSFNAGSMNTGDFNSGNVNTGYFNSGNIN 539 Query 446 TGSWNAGNVNTGFGIITDSGLTNSGFGNTGTDVSGF-----FNTPTGPLAVDVSGFFNTA 500 TG +N+G++NTG + + NSG+ +TGT+ SG+ FN+ A D F T Sbjct 540 TGFFNSGDLNTGLFNSVNQPVQNSGWLHTGTNNSGYANAGTFNSGFDNNARDEHAEFVTG 599 Query 501 SGGTV-INGQTSGIGNIG---------VPGTLFGSVRSGLNTGLFNMGTAISGLFNLRQL 550 + G + +GI N+G VP T+ G+ +G N GT+ISG FN L Sbjct 600 NSGLANVGNYNAGIINVGDHLSGFRNSVP-TITGTANI---SGFVNAGTSISGFFNFGSL 655 Query 551 L 551 + Sbjct 656 M 656 Score = 152 bits (384), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 160/396 (41%), Positives = 201/396 (51%), Gaps = 106/396 (26%) Query 181 NLGIGNQGNANLGGGNTGSGNIGNGNKGSSNLGGGNIGNNNIGSGNRGSDNFGAGNVGTG 240 NLG GN G+ N GGGNTG+ N+G GN G+SN G GN GN N G+GN G NFG+GN+G+G Sbjct 289 NLGSGNTGDTNFGGGNTGNLNVGGGNTGNSNFGFGNTGNVNFGNGNTGDTNFGSGNLGSG 348 Query 241 NIGFGNQGPIDVNLLATPGQNNVGLGNIGNNNMGFGNTGDANTGGG--NTGNGNIGGGNT 298 NIGFGN+G +N+G GN GNNN+GFG TGD G G N+G+GN+G GN+ Sbjct 349 NIGFGNKG-----------SHNIGFGNSGNNNIGFGLTGDNQIGFGALNSGSGNLGFGNS 397 Query 299 GNNNFGFGNTGNNNIGIGLTGNNQMGINLA------------------------------ 328 GN N GF N+GNNNIG+G +GN +++ Sbjct 398 GNGNIGFFNSGNNNIGMGNSGNGVGALSVEFGSSAERSSGFGNSGELSTGIGNSGQLSTG 457 Query 329 -------------------GLLNSGSGNIGIGNSG----TNNIGLFNSGSGNIGVFNTGA 365 G NSG+ N GIGNSG T ++GLFNSG N G FN G Sbjct 458 WFNSATTSTGWFNSGTTNTGWFNSGTTNTGIGNSGGNLVTGSMGLFNSGHTNTGSFNAG- 516 Query 366 NTLVPGDLN----NLGVGNSGNANIGFGNAGVLNTGFGNA---SILNTGLGNAGELNTGF 418 ++ GD N N G NSGN N GF N+G LNTG N+ + N+G + G N+G+ Sbjct 517 -SMNTGDFNSGNVNTGYFNSGNINTGFFNSGDLNTGLFNSVNQPVQNSGWLHTGTNNSGY 575 Query 419 GNAGFVNTGFDNSGNVNTGN---GNSGNINTGSWNAGNVNTG-------------FGIIT 462 NAG N+GFDN+ GNSG N G++NAG +N G G Sbjct 576 ANAGTFNSGFDNNARDEHAEFVTGNSGLANVGNYNAGIINVGDHLSGFRNSVPTITGTAN 635 Query 463 DSGLTN---------------SGFGNTGTDVSGFFN 483 SG N SGF N +VSG+ N Sbjct 636 ISGFVNAGTSISGFFNFGSLMSGFANFDDEVSGYLN 671 >gi|254364419|ref|ZP_04980465.1| PPE family protein [Mycobacterium tuberculosis str. Haarlem] gi|134149933|gb|EBA41978.1| PPE family protein [Mycobacterium tuberculosis str. Haarlem] Length=681 Score = 347 bits (890), Expect = 3e-93, Method: Compositional matrix adjust. Identities = 304/661 (46%), Positives = 377/661 (58%), Gaps = 117/661 (17%) Query 1 MAHFSVLPPEINSLRMYLGAGSAPMLQAAAAWDGLAAELGTAASSFSSVTTGLTGQAWQG 60 + +FSVLPPEINS M+ GAG PML AA+AW GLA +L +AA+SFS+VT+ L +WQG Sbjct 3 VMNFSVLPPEINSALMFAGAGPGPMLAAASAWTGLAGDLHSAAASFSAVTSQLATGSWQG 62 Query 61 PASAAMAAAAAPYAGFLTTASAQAQLAAGQAKAVASVFEAAKAAIVPPAAVAANREAFLA 120 PASAAM AA YA +LTTA+AQA+ AAGQA+A S FEAA AA V P AV+ANR + Sbjct 63 PASAAMTGVAASYARWLTTAAAQAEQAAGQAQAAVSAFEAALAATVHPGAVSANRGRLRS 122 Query 121 LIRSNWLGLNAPWIAAVESLYEEYWAADVAAMTGYHAGASQAAAQL----PLPAGLQQ-- 174 L+ SN LG NAP IAAVE++YE+ WAADVAAM GYH AS A L P P+ Sbjct 123 LVASNLLGQNAPAIAAVEAVYEQMWAADVAAMLGYHGEASAVALSLTPFTPSPSAAATPG 182 Query 175 ---------FLN-----------TLPNLGIGNQGNANLGGGNTGSGNIGN---------- 204 FL+ NLG+GN G+ N G NTGS N+GN Sbjct 183 GAVIIAGFPFLDLGNVTIGGFNLASGNLGLGNLGSFNPGSANTGSVNLGNANIGDLNLGS 242 Query 205 GNKGSSNLGGGNIGNNNIGSGNRGSDNFGAGNVGTGNIGFGNQGPI--------DVNL-- 254 GN GS NLGGGN G+ N GSGN G+ N+G+GN+G+ N+G GN G D N Sbjct 243 GNIGSYNLGGGNTGDLNPGSGNTGTLNWGSGNIGSYNLGGGNLGSYNLGSGNTGDTNFGG 302 Query 255 ---------LATPGQNNVGLGNIGNNNMGFGNTGDANTGGGNTGNGNIGGGNTGNNNFGF 305 G +N G GN GN N G GNTGD N G GN G+GNIG GN G++N GF Sbjct 303 GNTGNLNVGGGNTGNSNFGFGNTGNVNFGNGNTGDTNFGSGNLGSGNIGFGNKGSHNIGF 362 Query 306 GNTGNNNIGIGLTGNNQMGINLAGLLNSGSGNIGIGNSGTNNIGLFNSGSGNIGVFNT-- 363 GN+GNNNIG GLTG+NQ+G G LNSGSGN+G GNSG NIG FNSG+ NIG+ N+ Sbjct 363 GNSGNNNIGFGLTGDNQIGF---GALNSGSGNLGFGNSGNGNIGFFNSGNNNIGMGNSGN 419 Query 364 --GANTLVPGD--LNNLGVGNSGNANIGFGNAGVL--------------------NTGFG 399 GA ++ G + G GNSG + G GN+G L NTG+ Sbjct 420 GVGALSVEFGSSAERSSGFGNSGELSTGIGNSGQLSTGWFNSATTSTGWFNSGTTNTGWF 479 Query 400 NASILNTGLG--------------NAGELNTGFGNAGFVNTGFDNSGNVNTGNGNSGNIN 445 N+ NTG+G N+G NTG NAG +NTG NSGNVNTG NS NIN Sbjct 480 NSGTTNTGIGNSGGNLVTGSMGLFNSGHTNTGSFNAGSMNTGDFNSGNVNTGYFNSDNIN 539 Query 446 TGSWNAGNVNTGFGIITDSGLTNSGFGNTGTDVSGF-----FNTPTGPLAVDVSGFFNTA 500 TG +N+G++NTG + + NSG+ +TGT+ SG+ FN+ A D F T Sbjct 540 TGFFNSGDLNTGLFNSVNQPVQNSGWLHTGTNNSGYANAGTFNSGFDNNARDEHAEFVTG 599 Query 501 SGGTV-INGQTSGIGNIG---------VPGTLFGSVRSGLNTGLFNMGTAISGLFNLRQL 550 + G + +GI N+G VP T+ G+ +G N GT+ISG FN L Sbjct 600 NSGLANVGNYNAGIINVGDHLSGFRNSVP-TITGTANI---SGFVNAGTSISGFFNFGSL 655 Query 551 L 551 + Sbjct 656 M 656 Lambda K H 0.311 0.133 0.393 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 1225712359146 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40