BLASTP 2.2.25+


Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.



Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
           15,229,318 sequences; 5,219,829,388 total letters



Query= Rv3563

Length=319
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

gi|15610699|ref|NP_218080.1|  acyl-CoA dehydrogenase FADE32 [Myco...   629    2e-178
gi|15843175|ref|NP_338212.1|  acyl-CoA dehydrogenase, putative [M...   626    1e-177
gi|289555827|ref|ZP_06445037.1|  acyl-CoA dehydrogenase fadE31 [M...   626    1e-177
gi|306801190|ref|ZP_07437858.1|  acyl-CoA dehydrogenase fadE32 [M...   626    1e-177
gi|289440992|ref|ZP_06430736.1|  acyl-CoA dehydrogenase fadE32 [M...   625    2e-177
gi|340628527|ref|YP_004746979.1|  putative acyl-CoA dehydrogenase...   625    3e-177
gi|31794739|ref|NP_857232.1|  acyl-CoA dehydrogenase FADE32 [Myco...   624    8e-177
gi|289572215|ref|ZP_06452442.1|  acyl-CoA dehydrogenase fadE32 [M...   622    2e-176
gi|298527041|ref|ZP_07014450.1|  acyl-CoA dehydrogenase FadE32 [M...   622    2e-176
gi|339299983|gb|AEJ52093.1|  acyl-CoA dehydrogenase fadE31 [Mycob...   622    3e-176
gi|289752276|ref|ZP_06511654.1|  acyl-CoA dehydrogenase fadE32 [M...   527    7e-148
gi|240169778|ref|ZP_04748437.1|  acyl-CoA dehydrogenase FadE32 [M...   493    2e-137
gi|296166608|ref|ZP_06849037.1|  acyl-CoA dehydrogenase FadE32 [M...   469    2e-130
gi|254822645|ref|ZP_05227646.1|  putative acyl-CoA dehydrogenase ...   465    5e-129
gi|342862392|ref|ZP_08719032.1|  FadE32 [Mycobacterium colombiens...   464    1e-128
gi|118462358|ref|YP_879878.1|  acyl-CoA dehydrogenase [Mycobacter...   443    2e-122
gi|41406602|ref|NP_959438.1|  FadE32 [Mycobacterium avium subsp. ...   443    2e-122
gi|118619308|ref|YP_907640.1|  acyl-CoA dehydrogenase FadE32 [Myc...   436    3e-120
gi|183985020|ref|YP_001853311.1|  acyl-CoA dehydrogenase FadE32 [...   434    7e-120
gi|126437645|ref|YP_001073336.1|  acyl-CoA dehydrogenase domain-c...   417    1e-114
gi|108801659|ref|YP_641856.1|  acyl-CoA dehydrogenase-like protei...   415    5e-114
gi|118468829|ref|YP_890239.1|  acyl-CoA dehydrogenase [Mycobacter...   411    7e-113
gi|120406236|ref|YP_956065.1|  acyl-CoA dehydrogenase domain-cont...   405    4e-111
gi|145222070|ref|YP_001132748.1|  acyl-CoA dehydrogenase domain-c...   401    7e-110
gi|169627697|ref|YP_001701346.1|  acyl-CoA dehydrogenase FadE [My...   357    2e-96 
gi|226304376|ref|YP_002764334.1|  acyl-CoA dehydrogenase [Rhodoco...   340    2e-91 
gi|229494542|ref|ZP_04388305.1|  Acyl-CoA dehydrogenase domain pr...   338    6e-91 
gi|333992359|ref|YP_004524973.1|  acyl-CoA dehydrogenase [Mycobac...   336    2e-90 
gi|226363947|ref|YP_002781729.1|  acyl-CoA dehydrogenase [Rhodoco...   318    8e-85 
gi|111021564|ref|YP_704536.1|  acyl-CoA dehydrogenase [Rhodococcu...   318    1e-84 
gi|302528337|ref|ZP_07280679.1|  acyl-CoA dehydrogenase domain-co...   280    2e-73 
gi|312138165|ref|YP_004005501.1|  acyl-CoA dehydrogenase [Rhodoco...   266    2e-69 
gi|325674931|ref|ZP_08154618.1|  acyl-CoA dehydrogenase [Rhodococ...   263    3e-68 
gi|326328931|ref|ZP_08195262.1|  putative acyl-CoA dehydrogenase ...   257    2e-66 
gi|312197062|ref|YP_004017123.1|  acyl-CoA dehydrogenase domain-c...   254    1e-65 
gi|311744281|ref|ZP_07718085.1|  acyl-CoA dehydrogenase [Aeromicr...   252    6e-65 
gi|333918612|ref|YP_004492193.1|  acyl-CoA dehydrogenase domain-c...   251    1e-64 
gi|54022444|ref|YP_116686.1|  putative acyl-CoA dehydrogenase [No...   251    1e-64 
gi|300785285|ref|YP_003765576.1|  acyl-CoA dehydrogenase [Amycola...   250    2e-64 
gi|296141510|ref|YP_003648753.1|  acyl-CoA dehydrogenase domain-c...   244    2e-62 
gi|159038390|ref|YP_001537643.1|  acyl-CoA dehydrogenase domain-c...   244    2e-62 
gi|119716994|ref|YP_923959.1|  acyl-CoA dehydrogenase domain-cont...   243    4e-62 
gi|343925879|ref|ZP_08765394.1|  putative acyl-CoA dehydrogenase ...   241    2e-61 
gi|288922889|ref|ZP_06417052.1|  acyl-CoA dehydrogenase domain pr...   238    8e-61 
gi|319947751|ref|ZP_08021957.1|  acyl-CoA dehydrogenase [Dietzia ...   234    1e-59 
gi|262200924|ref|YP_003272132.1|  acyl-CoA dehydrogenase domain-c...   233    4e-59 
gi|290961219|ref|YP_003492401.1|  oxidoreductase [Streptomyces sc...   232    6e-59 
gi|145595143|ref|YP_001159440.1|  acyl-CoA dehydrogenase domain-c...   230    2e-58 
gi|29832737|ref|NP_827371.1|  acyl-CoA dehydrogenase [Streptomyce...   228    8e-58 
gi|307086357|ref|ZP_07495470.1|  putative acyl-CoA dehydrogenase,...   223    2e-56 


>gi|15610699|ref|NP_218080.1| acyl-CoA dehydrogenase FADE32 [Mycobacterium tuberculosis H37Rv]
 gi|148663426|ref|YP_001284949.1| acyl-CoA dehydrogenase FadE32 [Mycobacterium tuberculosis H37Ra]
 gi|148824769|ref|YP_001289523.1| acyl-CoA dehydrogenase fadE32 [Mycobacterium tuberculosis F11]
 20 more sequence titles
 Length=319

 Score =  629 bits (1622),  Expect = 2e-178, Method: Compositional matrix adjust.
 Identities = 318/319 (99%), Positives = 319/319 (100%), Gaps = 0/319 (0%)

Query  1    VTMEFALNEQQRDFAASIDAALGAADLPGVVRAWAAGDVAPGRKVWQQLANLGVTALGVA  60
            +TMEFALNEQQRDFAASIDAALGAADLPGVVRAWAAGDVAPGRKVWQQLANLGVTALGVA
Sbjct  1    MTMEFALNEQQRDFAASIDAALGAADLPGVVRAWAAGDVAPGRKVWQQLANLGVTALGVA  60

Query  61   EKFDGLGASPVDLVVALERLGRWCVPGPVTESIAVAPILLAHDDQAERSHGLASGELIAT  120
            EKFDGLGASPVDLVVALERLGRWCVPGPVTESIAVAPILLAHDDQAERSHGLASGELIAT
Sbjct  61   EKFDGLGASPVDLVVALERLGRWCVPGPVTESIAVAPILLAHDDQAERSHGLASGELIAT  120

Query  121  VAMPPRVPRAVDADTAGLVLLAGDGSVTEGTPGDCHRSVDPSRRLYEVAASGQAWRAPKD  180
            VAMPPRVPRAVDADTAGLVLLAGDGSVTEGTPGDCHRSVDPSRRLYEVAASGQAWRAPKD
Sbjct  121  VAMPPRVPRAVDADTAGLVLLAGDGSVTEGTPGDCHRSVDPSRRLYEVAASGQAWRAPKD  180

Query  181  VVARAYEFGALATAAQLVGAGQALLEAAVNYAKQRTQFGRAIGSYQAIKHKLADVHIAIE  240
            VVARAYEFGALATAAQLVGAGQALLEAAVNYAKQRTQFGRAIGSYQAIKHKLADVHIAIE
Sbjct  181  VVARAYEFGALATAAQLVGAGQALLEAAVNYAKQRTQFGRAIGSYQAIKHKLADVHIAIE  240

Query  241  LACPLVYGAAVSLEPRDVSAAKAAASEAALLAARWALQTHGAIGFTCEHDLSLWLLRVQA  300
            LACPLVYGAAVSLEPRDVSAAKAAASEAALLAARWALQTHGAIGFTCEHDLSLWLLRVQA
Sbjct  241  LACPLVYGAAVSLEPRDVSAAKAAASEAALLAARWALQTHGAIGFTCEHDLSLWLLRVQA  300

Query  301  LHSAWGTPQEHRRRVLEAL  319
            LHSAWGTPQEHRRRVLEAL
Sbjct  301  LHSAWGTPQEHRRRVLEAL  319


>gi|15843175|ref|NP_338212.1| acyl-CoA dehydrogenase, putative [Mycobacterium tuberculosis 
CDC1551]
 gi|308232500|ref|ZP_07664099.1| acyl-CoA dehydrogenase fadE32 [Mycobacterium tuberculosis SUMu001]
 gi|308369161|ref|ZP_07666669.1| acyl-CoA dehydrogenase fadE32 [Mycobacterium tuberculosis SUMu002]
 16 more sequence titles
 Length=317

 Score =  626 bits (1615),  Expect = 1e-177, Method: Compositional matrix adjust.
 Identities = 317/317 (100%), Positives = 317/317 (100%), Gaps = 0/317 (0%)

Query  3    MEFALNEQQRDFAASIDAALGAADLPGVVRAWAAGDVAPGRKVWQQLANLGVTALGVAEK  62
            MEFALNEQQRDFAASIDAALGAADLPGVVRAWAAGDVAPGRKVWQQLANLGVTALGVAEK
Sbjct  1    MEFALNEQQRDFAASIDAALGAADLPGVVRAWAAGDVAPGRKVWQQLANLGVTALGVAEK  60

Query  63   FDGLGASPVDLVVALERLGRWCVPGPVTESIAVAPILLAHDDQAERSHGLASGELIATVA  122
            FDGLGASPVDLVVALERLGRWCVPGPVTESIAVAPILLAHDDQAERSHGLASGELIATVA
Sbjct  61   FDGLGASPVDLVVALERLGRWCVPGPVTESIAVAPILLAHDDQAERSHGLASGELIATVA  120

Query  123  MPPRVPRAVDADTAGLVLLAGDGSVTEGTPGDCHRSVDPSRRLYEVAASGQAWRAPKDVV  182
            MPPRVPRAVDADTAGLVLLAGDGSVTEGTPGDCHRSVDPSRRLYEVAASGQAWRAPKDVV
Sbjct  121  MPPRVPRAVDADTAGLVLLAGDGSVTEGTPGDCHRSVDPSRRLYEVAASGQAWRAPKDVV  180

Query  183  ARAYEFGALATAAQLVGAGQALLEAAVNYAKQRTQFGRAIGSYQAIKHKLADVHIAIELA  242
            ARAYEFGALATAAQLVGAGQALLEAAVNYAKQRTQFGRAIGSYQAIKHKLADVHIAIELA
Sbjct  181  ARAYEFGALATAAQLVGAGQALLEAAVNYAKQRTQFGRAIGSYQAIKHKLADVHIAIELA  240

Query  243  CPLVYGAAVSLEPRDVSAAKAAASEAALLAARWALQTHGAIGFTCEHDLSLWLLRVQALH  302
            CPLVYGAAVSLEPRDVSAAKAAASEAALLAARWALQTHGAIGFTCEHDLSLWLLRVQALH
Sbjct  241  CPLVYGAAVSLEPRDVSAAKAAASEAALLAARWALQTHGAIGFTCEHDLSLWLLRVQALH  300

Query  303  SAWGTPQEHRRRVLEAL  319
            SAWGTPQEHRRRVLEAL
Sbjct  301  SAWGTPQEHRRRVLEAL  317


>gi|289555827|ref|ZP_06445037.1| acyl-CoA dehydrogenase fadE31 [Mycobacterium tuberculosis KZN 
605]
 gi|289440459|gb|EFD22952.1| acyl-CoA dehydrogenase fadE31 [Mycobacterium tuberculosis KZN 
605]
Length=696

 Score =  626 bits (1615),  Expect = 1e-177, Method: Compositional matrix adjust.
 Identities = 319/319 (100%), Positives = 319/319 (100%), Gaps = 0/319 (0%)

Query  1    VTMEFALNEQQRDFAASIDAALGAADLPGVVRAWAAGDVAPGRKVWQQLANLGVTALGVA  60
            VTMEFALNEQQRDFAASIDAALGAADLPGVVRAWAAGDVAPGRKVWQQLANLGVTALGVA
Sbjct  378  VTMEFALNEQQRDFAASIDAALGAADLPGVVRAWAAGDVAPGRKVWQQLANLGVTALGVA  437

Query  61   EKFDGLGASPVDLVVALERLGRWCVPGPVTESIAVAPILLAHDDQAERSHGLASGELIAT  120
            EKFDGLGASPVDLVVALERLGRWCVPGPVTESIAVAPILLAHDDQAERSHGLASGELIAT
Sbjct  438  EKFDGLGASPVDLVVALERLGRWCVPGPVTESIAVAPILLAHDDQAERSHGLASGELIAT  497

Query  121  VAMPPRVPRAVDADTAGLVLLAGDGSVTEGTPGDCHRSVDPSRRLYEVAASGQAWRAPKD  180
            VAMPPRVPRAVDADTAGLVLLAGDGSVTEGTPGDCHRSVDPSRRLYEVAASGQAWRAPKD
Sbjct  498  VAMPPRVPRAVDADTAGLVLLAGDGSVTEGTPGDCHRSVDPSRRLYEVAASGQAWRAPKD  557

Query  181  VVARAYEFGALATAAQLVGAGQALLEAAVNYAKQRTQFGRAIGSYQAIKHKLADVHIAIE  240
            VVARAYEFGALATAAQLVGAGQALLEAAVNYAKQRTQFGRAIGSYQAIKHKLADVHIAIE
Sbjct  558  VVARAYEFGALATAAQLVGAGQALLEAAVNYAKQRTQFGRAIGSYQAIKHKLADVHIAIE  617

Query  241  LACPLVYGAAVSLEPRDVSAAKAAASEAALLAARWALQTHGAIGFTCEHDLSLWLLRVQA  300
            LACPLVYGAAVSLEPRDVSAAKAAASEAALLAARWALQTHGAIGFTCEHDLSLWLLRVQA
Sbjct  618  LACPLVYGAAVSLEPRDVSAAKAAASEAALLAARWALQTHGAIGFTCEHDLSLWLLRVQA  677

Query  301  LHSAWGTPQEHRRRVLEAL  319
            LHSAWGTPQEHRRRVLEAL
Sbjct  678  LHSAWGTPQEHRRRVLEAL  696


>gi|306801190|ref|ZP_07437858.1| acyl-CoA dehydrogenase fadE32 [Mycobacterium tuberculosis SUMu008]
 gi|308352001|gb|EFP40852.1| acyl-CoA dehydrogenase fadE32 [Mycobacterium tuberculosis SUMu008]
Length=319

 Score =  626 bits (1615),  Expect = 1e-177, Method: Compositional matrix adjust.
 Identities = 317/319 (99%), Positives = 318/319 (99%), Gaps = 0/319 (0%)

Query  1    VTMEFALNEQQRDFAASIDAALGAADLPGVVRAWAAGDVAPGRKVWQQLANLGVTALGVA  60
            +TMEFALNEQQRDFAASIDAALGAADLPGVVRAWAAGDVAPGRKVWQQLANLGVTALGVA
Sbjct  1    MTMEFALNEQQRDFAASIDAALGAADLPGVVRAWAAGDVAPGRKVWQQLANLGVTALGVA  60

Query  61   EKFDGLGASPVDLVVALERLGRWCVPGPVTESIAVAPILLAHDDQAERSHGLASGELIAT  120
            EKFDGLGASPVDLVVALERLGRWCVPGPVTESIAVAPILLAHDDQAERSHGLASGELIAT
Sbjct  61   EKFDGLGASPVDLVVALERLGRWCVPGPVTESIAVAPILLAHDDQAERSHGLASGELIAT  120

Query  121  VAMPPRVPRAVDADTAGLVLLAGDGSVTEGTPGDCHRSVDPSRRLYEVAASGQAWRAPKD  180
            VAMPPRV RAVDADTAGLVLLAGDGSVTEGTPGDCHRSVDPSRRLYEVAASGQAWRAPKD
Sbjct  121  VAMPPRVLRAVDADTAGLVLLAGDGSVTEGTPGDCHRSVDPSRRLYEVAASGQAWRAPKD  180

Query  181  VVARAYEFGALATAAQLVGAGQALLEAAVNYAKQRTQFGRAIGSYQAIKHKLADVHIAIE  240
            VVARAYEFGALATAAQLVGAGQALLEAAVNYAKQRTQFGRAIGSYQAIKHKLADVHIAIE
Sbjct  181  VVARAYEFGALATAAQLVGAGQALLEAAVNYAKQRTQFGRAIGSYQAIKHKLADVHIAIE  240

Query  241  LACPLVYGAAVSLEPRDVSAAKAAASEAALLAARWALQTHGAIGFTCEHDLSLWLLRVQA  300
            LACPLVYGAAVSLEPRDVSAAKAAASEAALLAARWALQTHGAIGFTCEHDLSLWLLRVQA
Sbjct  241  LACPLVYGAAVSLEPRDVSAAKAAASEAALLAARWALQTHGAIGFTCEHDLSLWLLRVQA  300

Query  301  LHSAWGTPQEHRRRVLEAL  319
            LHSAWGTPQEHRRRVLEAL
Sbjct  301  LHSAWGTPQEHRRRVLEAL  319


>gi|289440992|ref|ZP_06430736.1| acyl-CoA dehydrogenase fadE32 [Mycobacterium tuberculosis T46]
 gi|289445155|ref|ZP_06434899.1| acyl-CoA dehydrogenase fadE32 [Mycobacterium tuberculosis CPHL_A]
 gi|289571805|ref|ZP_06452032.1| acyl-CoA dehydrogenase fadE32 [Mycobacterium tuberculosis T17]
 11 more sequence titles
 Length=319

 Score =  625 bits (1613),  Expect = 2e-177, Method: Compositional matrix adjust.
 Identities = 317/319 (99%), Positives = 318/319 (99%), Gaps = 0/319 (0%)

Query  1    VTMEFALNEQQRDFAASIDAALGAADLPGVVRAWAAGDVAPGRKVWQQLANLGVTALGVA  60
            +TMEFALNEQQRDFAASIDAALGAADLPGVVRAWAAGDVAPGRKVWQQLANLGVTALGVA
Sbjct  1    MTMEFALNEQQRDFAASIDAALGAADLPGVVRAWAAGDVAPGRKVWQQLANLGVTALGVA  60

Query  61   EKFDGLGASPVDLVVALERLGRWCVPGPVTESIAVAPILLAHDDQAERSHGLASGELIAT  120
            EKFDGLGASPVDLVVALERLGRWCVPGPVTESIAVAPILLAHDDQAERSHGLASGELIAT
Sbjct  61   EKFDGLGASPVDLVVALERLGRWCVPGPVTESIAVAPILLAHDDQAERSHGLASGELIAT  120

Query  121  VAMPPRVPRAVDADTAGLVLLAGDGSVTEGTPGDCHRSVDPSRRLYEVAASGQAWRAPKD  180
            VAMPPRVPRAVDADTAGLVLLAGDGSVTEGTPGDCHRSVDPSRRLYEVAASGQAWRAPKD
Sbjct  121  VAMPPRVPRAVDADTAGLVLLAGDGSVTEGTPGDCHRSVDPSRRLYEVAASGQAWRAPKD  180

Query  181  VVARAYEFGALATAAQLVGAGQALLEAAVNYAKQRTQFGRAIGSYQAIKHKLADVHIAIE  240
            VVARAYEFGALATAAQLVGAGQALLEAAVNYAKQRTQFGRAIGSYQAIKHKLADVHIAIE
Sbjct  181  VVARAYEFGALATAAQLVGAGQALLEAAVNYAKQRTQFGRAIGSYQAIKHKLADVHIAIE  240

Query  241  LACPLVYGAAVSLEPRDVSAAKAAASEAALLAARWALQTHGAIGFTCEHDLSLWLLRVQA  300
            LACPLVYGAAVSLEPRDVSAAKAAASEAALLAAR ALQTHGAIGFTCEHDLSLWLLRVQA
Sbjct  241  LACPLVYGAAVSLEPRDVSAAKAAASEAALLAARSALQTHGAIGFTCEHDLSLWLLRVQA  300

Query  301  LHSAWGTPQEHRRRVLEAL  319
            LHSAWGTPQEHRRRVLEAL
Sbjct  301  LHSAWGTPQEHRRRVLEAL  319


>gi|340628527|ref|YP_004746979.1| putative acyl-CoA dehydrogenase FADE32 [Mycobacterium canettii 
CIPT 140010059]
 gi|340006717|emb|CCC45905.1| putative acyl-CoA dehydrogenase FADE32 [Mycobacterium canettii 
CIPT 140010059]
Length=319

 Score =  625 bits (1611),  Expect = 3e-177, Method: Compositional matrix adjust.
 Identities = 316/319 (99%), Positives = 318/319 (99%), Gaps = 0/319 (0%)

Query  1    VTMEFALNEQQRDFAASIDAALGAADLPGVVRAWAAGDVAPGRKVWQQLANLGVTALGVA  60
            +TMEFALNEQQRDFAASIDAALGAADLPGVVRAWAAGDVAPGRKVWQQLANLGVTALGVA
Sbjct  1    MTMEFALNEQQRDFAASIDAALGAADLPGVVRAWAAGDVAPGRKVWQQLANLGVTALGVA  60

Query  61   EKFDGLGASPVDLVVALERLGRWCVPGPVTESIAVAPILLAHDDQAERSHGLASGELIAT  120
            EKFDGLGASPVDLVVALERLGRWCVPGPVTESIAVAPILLAHDDQAERSHGLASGELIAT
Sbjct  61   EKFDGLGASPVDLVVALERLGRWCVPGPVTESIAVAPILLAHDDQAERSHGLASGELIAT  120

Query  121  VAMPPRVPRAVDADTAGLVLLAGDGSVTEGTPGDCHRSVDPSRRLYEVAASGQAWRAPKD  180
            VAMPPRVPRAVDADTAGLVLLAGDGSVTEGTPGDCHRSVDPSRRLYEVAASGQAWRAPKD
Sbjct  121  VAMPPRVPRAVDADTAGLVLLAGDGSVTEGTPGDCHRSVDPSRRLYEVAASGQAWRAPKD  180

Query  181  VVARAYEFGALATAAQLVGAGQALLEAAVNYAKQRTQFGRAIGSYQAIKHKLADVHIAIE  240
            VVARAYEFGALATAAQLVGAGQALLEAAVNYAKQRTQFGRAIGSYQAIKHKLADVHIA+E
Sbjct  181  VVARAYEFGALATAAQLVGAGQALLEAAVNYAKQRTQFGRAIGSYQAIKHKLADVHIAVE  240

Query  241  LACPLVYGAAVSLEPRDVSAAKAAASEAALLAARWALQTHGAIGFTCEHDLSLWLLRVQA  300
            LACPLVYGAAVSLEPRDVSAAKAAASEAALLAAR ALQTHGAIGFTCEHDLSLWLLRVQA
Sbjct  241  LACPLVYGAAVSLEPRDVSAAKAAASEAALLAARSALQTHGAIGFTCEHDLSLWLLRVQA  300

Query  301  LHSAWGTPQEHRRRVLEAL  319
            LHSAWGTPQEHRRRVLEAL
Sbjct  301  LHSAWGTPQEHRRRVLEAL  319


>gi|31794739|ref|NP_857232.1| acyl-CoA dehydrogenase FADE32 [Mycobacterium bovis AF2122/97]
 gi|121639482|ref|YP_979706.1| putative acyl-CoA dehydrogenase fadE32 [Mycobacterium bovis BCG 
str. Pasteur 1173P2]
 gi|224991979|ref|YP_002646668.1| putative acyl-CoA dehydrogenase [Mycobacterium bovis BCG str. 
Tokyo 172]
 gi|31620336|emb|CAD95779.1| PROBABLE ACYL-COA DEHYDROGENASE FADE32 [Mycobacterium bovis AF2122/97]
 gi|121495130|emb|CAL73616.1| Probable acyl-CoA dehydrogenase fadE32 [Mycobacterium bovis BCG 
str. Pasteur 1173P2]
 gi|224775094|dbj|BAH27900.1| putative acyl-CoA dehydrogenase [Mycobacterium bovis BCG str. 
Tokyo 172]
 gi|341603503|emb|CCC66184.1| probable acyl-CoA dehydrogenase fadE32 [Mycobacterium bovis BCG 
str. Moreau RDJ]
Length=319

 Score =  624 bits (1608),  Expect = 8e-177, Method: Compositional matrix adjust.
 Identities = 316/319 (99%), Positives = 318/319 (99%), Gaps = 0/319 (0%)

Query  1    VTMEFALNEQQRDFAASIDAALGAADLPGVVRAWAAGDVAPGRKVWQQLANLGVTALGVA  60
            +TMEFALNEQQRDFAASIDAALGAADLPGVVRAWAAGDVAPGRKVWQQLANLGVTALGVA
Sbjct  1    MTMEFALNEQQRDFAASIDAALGAADLPGVVRAWAAGDVAPGRKVWQQLANLGVTALGVA  60

Query  61   EKFDGLGASPVDLVVALERLGRWCVPGPVTESIAVAPILLAHDDQAERSHGLASGELIAT  120
            EKFDGLGASPVDLVVALERLGRWCVPGPVTESIAVAPILLAHDD+AERSHGLASGELIAT
Sbjct  61   EKFDGLGASPVDLVVALERLGRWCVPGPVTESIAVAPILLAHDDRAERSHGLASGELIAT  120

Query  121  VAMPPRVPRAVDADTAGLVLLAGDGSVTEGTPGDCHRSVDPSRRLYEVAASGQAWRAPKD  180
            VAMPPRVPRAVDADTAGLVLLAGDGSVTEGTPGDCHRSVDPSRRLYEVAASGQAWRAPKD
Sbjct  121  VAMPPRVPRAVDADTAGLVLLAGDGSVTEGTPGDCHRSVDPSRRLYEVAASGQAWRAPKD  180

Query  181  VVARAYEFGALATAAQLVGAGQALLEAAVNYAKQRTQFGRAIGSYQAIKHKLADVHIAIE  240
            VVARAYEFGALATAAQLVGAGQALLEAAVNYAKQRTQFGRAIGSYQAIKHKLADVHIAIE
Sbjct  181  VVARAYEFGALATAAQLVGAGQALLEAAVNYAKQRTQFGRAIGSYQAIKHKLADVHIAIE  240

Query  241  LACPLVYGAAVSLEPRDVSAAKAAASEAALLAARWALQTHGAIGFTCEHDLSLWLLRVQA  300
            LACPLVYGAAVSLEPRDVSAAKAAASEAALLAAR ALQTHGAIGFTCEHDLSLWLLRVQA
Sbjct  241  LACPLVYGAAVSLEPRDVSAAKAAASEAALLAARSALQTHGAIGFTCEHDLSLWLLRVQA  300

Query  301  LHSAWGTPQEHRRRVLEAL  319
            LHSAWGTPQEHRRRVLEAL
Sbjct  301  LHSAWGTPQEHRRRVLEAL  319


>gi|289572215|ref|ZP_06452442.1| acyl-CoA dehydrogenase fadE32 [Mycobacterium tuberculosis K85]
 gi|339633561|ref|YP_004725203.1| acyl-CoA dehydrogenase FADE32 [Mycobacterium africanum GM041182]
 gi|289536646|gb|EFD41224.1| acyl-CoA dehydrogenase fadE32 [Mycobacterium tuberculosis K85]
 gi|339332917|emb|CCC28644.1| putative acyl-CoA dehydrogenase FADE32 [Mycobacterium africanum 
GM041182]
Length=319

 Score =  622 bits (1605),  Expect = 2e-176, Method: Compositional matrix adjust.
 Identities = 316/319 (99%), Positives = 317/319 (99%), Gaps = 0/319 (0%)

Query  1    VTMEFALNEQQRDFAASIDAALGAADLPGVVRAWAAGDVAPGRKVWQQLANLGVTALGVA  60
            +TMEFALNEQQRDFAASIDAALGAADLPGVVRAWAAGDVAPGRKVWQQLANLGVTALGVA
Sbjct  1    MTMEFALNEQQRDFAASIDAALGAADLPGVVRAWAAGDVAPGRKVWQQLANLGVTALGVA  60

Query  61   EKFDGLGASPVDLVVALERLGRWCVPGPVTESIAVAPILLAHDDQAERSHGLASGELIAT  120
            EKFDGLGASPVDLVVALERLGRWCVPGPVTESIAVAPILLAHDDQAERSHGLASGELIAT
Sbjct  61   EKFDGLGASPVDLVVALERLGRWCVPGPVTESIAVAPILLAHDDQAERSHGLASGELIAT  120

Query  121  VAMPPRVPRAVDADTAGLVLLAGDGSVTEGTPGDCHRSVDPSRRLYEVAASGQAWRAPKD  180
            VAMPPRVPRAVDADTAGLVLLAGDGSVTEGTPGDCHRSVDPSRRLYEVAASGQAWRAPKD
Sbjct  121  VAMPPRVPRAVDADTAGLVLLAGDGSVTEGTPGDCHRSVDPSRRLYEVAASGQAWRAPKD  180

Query  181  VVARAYEFGALATAAQLVGAGQALLEAAVNYAKQRTQFGRAIGSYQAIKHKLADVHIAIE  240
            VVARAYEFGALATAAQLVGAGQALL AAVNYAKQRTQFGRAIGSYQAIKHKLADVHIAIE
Sbjct  181  VVARAYEFGALATAAQLVGAGQALLVAAVNYAKQRTQFGRAIGSYQAIKHKLADVHIAIE  240

Query  241  LACPLVYGAAVSLEPRDVSAAKAAASEAALLAARWALQTHGAIGFTCEHDLSLWLLRVQA  300
            LACPLVYGAAVSLEPRDVSAAKAAASEAALLAAR ALQTHGAIGFTCEHDLSLWLLRVQA
Sbjct  241  LACPLVYGAAVSLEPRDVSAAKAAASEAALLAARSALQTHGAIGFTCEHDLSLWLLRVQA  300

Query  301  LHSAWGTPQEHRRRVLEAL  319
            LHSAWGTPQEHRRRVLEAL
Sbjct  301  LHSAWGTPQEHRRRVLEAL  319


>gi|298527041|ref|ZP_07014450.1| acyl-CoA dehydrogenase FadE32 [Mycobacterium tuberculosis 94_M4241A]
 gi|298496835|gb|EFI32129.1| acyl-CoA dehydrogenase FadE32 [Mycobacterium tuberculosis 94_M4241A]
 gi|339296382|gb|AEJ48493.1| acyl-CoA dehydrogenase fadE31 [Mycobacterium tuberculosis CCDC5079]
Length=317

 Score =  622 bits (1604),  Expect = 2e-176, Method: Compositional matrix adjust.
 Identities = 316/317 (99%), Positives = 316/317 (99%), Gaps = 0/317 (0%)

Query  3    MEFALNEQQRDFAASIDAALGAADLPGVVRAWAAGDVAPGRKVWQQLANLGVTALGVAEK  62
            MEFALNEQQRDFAASIDAALGAADLPGVVRAWAAGDVAPGRKVWQQLANLGVTALGVAEK
Sbjct  1    MEFALNEQQRDFAASIDAALGAADLPGVVRAWAAGDVAPGRKVWQQLANLGVTALGVAEK  60

Query  63   FDGLGASPVDLVVALERLGRWCVPGPVTESIAVAPILLAHDDQAERSHGLASGELIATVA  122
            FDGLGASPVDLVVALERLGRWCVPGPVTESIAVAPILLAHDDQAERSHGLASGELIATVA
Sbjct  61   FDGLGASPVDLVVALERLGRWCVPGPVTESIAVAPILLAHDDQAERSHGLASGELIATVA  120

Query  123  MPPRVPRAVDADTAGLVLLAGDGSVTEGTPGDCHRSVDPSRRLYEVAASGQAWRAPKDVV  182
            MPPRVPRAVDADTAGLVLLAGDGSVTEGTPGDCHRSVDPSRRLYEVAASGQAWRAPKDVV
Sbjct  121  MPPRVPRAVDADTAGLVLLAGDGSVTEGTPGDCHRSVDPSRRLYEVAASGQAWRAPKDVV  180

Query  183  ARAYEFGALATAAQLVGAGQALLEAAVNYAKQRTQFGRAIGSYQAIKHKLADVHIAIELA  242
            ARAYEFGALATAAQLVGAGQALLEAAVNYAKQRTQFGRAIGSYQAIKHKLADVHIAIELA
Sbjct  181  ARAYEFGALATAAQLVGAGQALLEAAVNYAKQRTQFGRAIGSYQAIKHKLADVHIAIELA  240

Query  243  CPLVYGAAVSLEPRDVSAAKAAASEAALLAARWALQTHGAIGFTCEHDLSLWLLRVQALH  302
            CPLVYGAAVSLEPRDVSAAKAAASEAALLAAR ALQTHGAIGFTCEHDLSLWLLRVQALH
Sbjct  241  CPLVYGAAVSLEPRDVSAAKAAASEAALLAARSALQTHGAIGFTCEHDLSLWLLRVQALH  300

Query  303  SAWGTPQEHRRRVLEAL  319
            SAWGTPQEHRRRVLEAL
Sbjct  301  SAWGTPQEHRRRVLEAL  317


>gi|339299983|gb|AEJ52093.1| acyl-CoA dehydrogenase fadE31 [Mycobacterium tuberculosis CCDC5180]
Length=317

 Score =  622 bits (1603),  Expect = 3e-176, Method: Compositional matrix adjust.
 Identities = 315/317 (99%), Positives = 315/317 (99%), Gaps = 0/317 (0%)

Query  3    MEFALNEQQRDFAASIDAALGAADLPGVVRAWAAGDVAPGRKVWQQLANLGVTALGVAEK  62
            MEFALNEQQRDFAASIDAALGAADLPGVVRAWAAGDVAPGRKVWQQLANLGVTALGVAEK
Sbjct  1    MEFALNEQQRDFAASIDAALGAADLPGVVRAWAAGDVAPGRKVWQQLANLGVTALGVAEK  60

Query  63   FDGLGASPVDLVVALERLGRWCVPGPVTESIAVAPILLAHDDQAERSHGLASGELIATVA  122
            FDGLGASPVDLVVALERLGRWCVPGPVTESIAVAPILLAHDDQAERSHGLASGELIATVA
Sbjct  61   FDGLGASPVDLVVALERLGRWCVPGPVTESIAVAPILLAHDDQAERSHGLASGELIATVA  120

Query  123  MPPRVPRAVDADTAGLVLLAGDGSVTEGTPGDCHRSVDPSRRLYEVAASGQAWRAPKDVV  182
            MPPRVPRAVDADTAGLVLLAGDGSVTEGTPGDCHRSVDPSRRLYEVAASGQAWRAPKDVV
Sbjct  121  MPPRVPRAVDADTAGLVLLAGDGSVTEGTPGDCHRSVDPSRRLYEVAASGQAWRAPKDVV  180

Query  183  ARAYEFGALATAAQLVGAGQALLEAAVNYAKQRTQFGRAIGSYQAIKHKLADVHIAIELA  242
            ARAYEFGALATAAQLVGAGQALLEAAVNYAKQRTQFGR IGSYQAIKHKLADVHIAIELA
Sbjct  181  ARAYEFGALATAAQLVGAGQALLEAAVNYAKQRTQFGRTIGSYQAIKHKLADVHIAIELA  240

Query  243  CPLVYGAAVSLEPRDVSAAKAAASEAALLAARWALQTHGAIGFTCEHDLSLWLLRVQALH  302
            CPLVYGAAVSLEPRDVSAAKAAASEAALLAAR ALQTHGAIGFTCEHDLSLWLLRVQALH
Sbjct  241  CPLVYGAAVSLEPRDVSAAKAAASEAALLAARSALQTHGAIGFTCEHDLSLWLLRVQALH  300

Query  303  SAWGTPQEHRRRVLEAL  319
            SAWGTPQEHRRRVLEAL
Sbjct  301  SAWGTPQEHRRRVLEAL  317


>gi|289752276|ref|ZP_06511654.1| acyl-CoA dehydrogenase fadE32 [Mycobacterium tuberculosis T92]
 gi|289692863|gb|EFD60292.1| acyl-CoA dehydrogenase fadE32 [Mycobacterium tuberculosis T92]
Length=269

 Score =  527 bits (1358),  Expect = 7e-148, Method: Compositional matrix adjust.
 Identities = 268/269 (99%), Positives = 269/269 (100%), Gaps = 0/269 (0%)

Query  1    VTMEFALNEQQRDFAASIDAALGAADLPGVVRAWAAGDVAPGRKVWQQLANLGVTALGVA  60
            +TMEFALNEQQRDFAASIDAALGAADLPGVVRAWAAGDVAPGRKVWQQLANLGVTALGVA
Sbjct  1    MTMEFALNEQQRDFAASIDAALGAADLPGVVRAWAAGDVAPGRKVWQQLANLGVTALGVA  60

Query  61   EKFDGLGASPVDLVVALERLGRWCVPGPVTESIAVAPILLAHDDQAERSHGLASGELIAT  120
            EKFDGLGASPVDLVVALERLGRWCVPGPVTESIAVAPILLAHDDQAERSHGLASGELIAT
Sbjct  61   EKFDGLGASPVDLVVALERLGRWCVPGPVTESIAVAPILLAHDDQAERSHGLASGELIAT  120

Query  121  VAMPPRVPRAVDADTAGLVLLAGDGSVTEGTPGDCHRSVDPSRRLYEVAASGQAWRAPKD  180
            VAMPPRVPRAVDADTAGLVLLAGDGSVTEGTPGDCHRSVDPSRRLYEVAASGQAWRAPKD
Sbjct  121  VAMPPRVPRAVDADTAGLVLLAGDGSVTEGTPGDCHRSVDPSRRLYEVAASGQAWRAPKD  180

Query  181  VVARAYEFGALATAAQLVGAGQALLEAAVNYAKQRTQFGRAIGSYQAIKHKLADVHIAIE  240
            VVARAYEFGALATAAQLVGAGQALLEAAVNYAKQRTQFGRAIGSYQAIKHKLADVHIAIE
Sbjct  181  VVARAYEFGALATAAQLVGAGQALLEAAVNYAKQRTQFGRAIGSYQAIKHKLADVHIAIE  240

Query  241  LACPLVYGAAVSLEPRDVSAAKAAASEAA  269
            LACPLVYGAAVSLEPRDVSAAKAAASEAA
Sbjct  241  LACPLVYGAAVSLEPRDVSAAKAAASEAA  269


>gi|240169778|ref|ZP_04748437.1| acyl-CoA dehydrogenase FadE32 [Mycobacterium kansasii ATCC 12478]
Length=319

 Score =  493 bits (1268),  Expect = 2e-137, Method: Compositional matrix adjust.
 Identities = 263/322 (82%), Positives = 287/322 (90%), Gaps = 6/322 (1%)

Query  1    VTMEFALNEQQRDFAASIDAALGAADLPGVVRAWAAGDVAPGRKVWQQLANLGVTALGVA  60
            +T++FAL++QQRDFAASIDAALGAADLPG VRAW+AGD APGRKVWQQLANLGVTAL V 
Sbjct  1    MTVDFALDQQQRDFAASIDAALGAADLPGAVRAWSAGDAAPGRKVWQQLANLGVTALNVP  60

Query  61   EKFDGLGASPVDLVVALERLGRWCVPGPVTESIAVAPILLAHDDQAERSHGLASGELIAT  120
            EKFDGL A PVDLVVALERLGRWCVPGPVTESIAVAP+LLA+DDQAER  GLA+GELIAT
Sbjct  61   EKFDGLAADPVDLVVALERLGRWCVPGPVTESIAVAPVLLANDDQAERCAGLAAGELIAT  120

Query  121  VAMPPRVPRAVDADTAGLVLLAGDGSVTEGTPGDCHRSVDPSRRLYEVAASG---QAWRA  177
            VA+PP+VPRAVDADTAGLVLLAG+  V EGTPG  H SVDPSR LY+VAA+G   QAW+A
Sbjct  121  VALPPQVPRAVDADTAGLVLLAGEAGVAEGTPGQRHASVDPSRHLYDVAAAGPNVQAWQA  180

Query  178  PKDVVARAYEFGALATAAQLVGAGQALLEAAVNYAKQRTQFGRAIGSYQAIKHKLADVHI  237
                + RAYEFG LATAAQLVGA +ALL AAV+YAKQRTQFGR IGSYQAIKHKLADVHI
Sbjct  181  D---IKRAYEFGVLATAAQLVGAAEALLSAAVDYAKQRTQFGRVIGSYQAIKHKLADVHI  237

Query  238  AIELACPLVYGAAVSLEPRDVSAAKAAASEAALLAARWALQTHGAIGFTCEHDLSLWLLR  297
            A+ELA PLVYGAA+SL+PRDVSAAK AA EA LLAAR ALQT+GAIGFT EHDLSLWLL+
Sbjct  238  AVELARPLVYGAALSLQPRDVSAAKVAAGEAGLLAARSALQTYGAIGFTQEHDLSLWLLK  297

Query  298  VQALHSAWGTPQEHRRRVLEAL  319
            VQAL SAWGTP+ HRRRVLEAL
Sbjct  298  VQALRSAWGTPEVHRRRVLEAL  319


>gi|296166608|ref|ZP_06849037.1| acyl-CoA dehydrogenase FadE32 [Mycobacterium parascrofulaceum 
ATCC BAA-614]
 gi|295898038|gb|EFG77615.1| acyl-CoA dehydrogenase FadE32 [Mycobacterium parascrofulaceum 
ATCC BAA-614]
Length=315

 Score =  469 bits (1208),  Expect = 2e-130, Method: Compositional matrix adjust.
 Identities = 252/317 (80%), Positives = 276/317 (88%), Gaps = 3/317 (0%)

Query  3    MEFALNEQQRDFAASIDAALGAADLPGVVRAWAAGDVAPGRKVWQQLANLGVTALGVAEK  62
            M+FAL+EQQRDFAASIDAAL AADLPGV+RAW+AGD APGRKVW QLA+LGVTAL V EK
Sbjct  1    MKFALDEQQRDFAASIDAALSAADLPGVIRAWSAGDTAPGRKVWGQLADLGVTALAVPEK  60

Query  63   FDGLGASPVDLVVALERLGRWCVPGPVTESIAVAPILLAHDDQAERSHGLASGELIATVA  122
            FDG+GA P+DLVVALERLGRWCVPGPV ESIAVAP+LLA D QA+R   LASGELIATVA
Sbjct  61   FDGIGADPIDLVVALERLGRWCVPGPVAESIAVAPVLLASDAQADRCAALASGELIATVA  120

Query  123  MPPRVPRAVDADTAGLVLLAGDGSVTEGTPGDCHRSVDPSRRLYEVAASGQAWRAPKDVV  182
            MPP+ PRAVDA+TAG+VLL  D  V+E  P D H SVDPSR LY+V A+GQAW+A ++  
Sbjct  121  MPPQAPRAVDAETAGVVLLVTDEGVSEAAPRDWHESVDPSRPLYDVTATGQAWQADRE--  178

Query  183  ARAYEFGALATAAQLVGAGQALLEAAVNYAKQRTQFGRAIGSYQAIKHKLADVHIAIELA  242
             RAYEFGALATAAQLVGA +ALL   V YAKQR+QFGR IGSYQAIKHKLADVHIAIELA
Sbjct  179  -RAYEFGALATAAQLVGAAEALLRDTVEYAKQRSQFGRVIGSYQAIKHKLADVHIAIELA  237

Query  243  CPLVYGAAVSLEPRDVSAAKAAASEAALLAARWALQTHGAIGFTCEHDLSLWLLRVQALH  302
             PL+YGAA+SL+ RDVSAAKAAASEA LLAAR ALQTHGAIGFT EHDLSLWLLRVQAL 
Sbjct  238  RPLLYGAALSLDARDVSAAKAAASEAGLLAARSALQTHGAIGFTQEHDLSLWLLRVQALR  297

Query  303  SAWGTPQEHRRRVLEAL  319
            SAWGTP+ HRRRVLEAL
Sbjct  298  SAWGTPEAHRRRVLEAL  314


>gi|254822645|ref|ZP_05227646.1| putative acyl-CoA dehydrogenase [Mycobacterium intracellulare 
ATCC 13950]
Length=310

 Score =  465 bits (1196),  Expect = 5e-129, Method: Compositional matrix adjust.
 Identities = 250/313 (80%), Positives = 271/313 (87%), Gaps = 3/313 (0%)

Query  3    MEFALNEQQRDFAASIDAALGAADLPGVVRAWAAGDVAPGRKVWQQLANLGVTALGVAEK  62
            M FAL+EQQRDFAASIDAALG+ADLP  VRAWAAGD APGRKVW+QLANLGVTAL V EK
Sbjct  1    MRFALDEQQRDFAASIDAALGSADLPSAVRAWAAGDTAPGRKVWEQLANLGVTALAVPEK  60

Query  63   FDGLGASPVDLVVALERLGRWCVPGPVTESIAVAPILLAHDDQAERSHGLASGELIATVA  122
            FDG+GA P+DLV+ALERLGRWCVPGPV ESIAVAP+LL  DD AER  GLASGELIATVA
Sbjct  61   FDGIGADPIDLVLALERLGRWCVPGPVVESIAVAPVLLDSDDHAERCAGLASGELIATVA  120

Query  123  MPPRVPRAVDADTAGLVLLAGDGSVTEGTPGDCHRSVDPSRRLYEVAASGQAWRAPKDVV  182
            +PPRVPRAVDAD A LVLLAGD  VTE T G+ H SVDPSR LY+V  +G AW A    V
Sbjct  121  LPPRVPRAVDADVANLVLLAGDEGVTEATAGEEHESVDPSRHLYDVTPAGSAWEAD---V  177

Query  183  ARAYEFGALATAAQLVGAGQALLEAAVNYAKQRTQFGRAIGSYQAIKHKLADVHIAIELA  242
             RAYEFG L TAAQLVGA +AL +AAV+YAKQRTQFGR IGSYQAIKHKLADVHIAIELA
Sbjct  178  KRAYEFGTLGTAAQLVGAAEALRDAAVDYAKQRTQFGRVIGSYQAIKHKLADVHIAIELA  237

Query  243  CPLVYGAAVSLEPRDVSAAKAAASEAALLAARWALQTHGAIGFTCEHDLSLWLLRVQALH  302
             PLV+GAA++L+PRDVSAAKAAA++A LLAAR ALQTHGAIGFT EHDLSL LLRVQAL 
Sbjct  238  RPLVHGAALTLDPRDVSAAKAAAADAGLLAARSALQTHGAIGFTQEHDLSLLLLRVQALR  297

Query  303  SAWGTPQEHRRRV  315
            SAWGTP+EHRRRV
Sbjct  298  SAWGTPEEHRRRV  310


>gi|342862392|ref|ZP_08719032.1| FadE32 [Mycobacterium colombiense CECT 3035]
 gi|342130063|gb|EGT83397.1| FadE32 [Mycobacterium colombiense CECT 3035]
Length=314

 Score =  464 bits (1193),  Expect = 1e-128, Method: Compositional matrix adjust.
 Identities = 255/317 (81%), Positives = 281/317 (89%), Gaps = 3/317 (0%)

Query  3    MEFALNEQQRDFAASIDAALGAADLPGVVRAWAAGDVAPGRKVWQQLANLGVTALGVAEK  62
            M+FAL+EQQRDFAASIDAALGAADLPG VRAW+AGD APGRKVW+QLANLGVTAL V EK
Sbjct  1    MKFALDEQQRDFAASIDAALGAADLPGAVRAWSAGDTAPGRKVWEQLANLGVTALAVPEK  60

Query  63   FDGLGASPVDLVVALERLGRWCVPGPVTESIAVAPILLAHDDQAERSHGLASGELIATVA  122
            FDG+ A PVDLVVA+ERLGRWCVPGPV ESIAVAP+LLA  D AER  GLASGELIATVA
Sbjct  61   FDGIEAHPVDLVVAIERLGRWCVPGPVAESIAVAPVLLASGDHAERCAGLASGELIATVA  120

Query  123  MPPRVPRAVDADTAGLVLLAGDGSVTEGTPGDCHRSVDPSRRLYEVAASGQAWRAPKDVV  182
            +PP+ PRAV AD AGLVLLAG+  VTE TPG+ H SVDPSR+L++V A+G AW+A    V
Sbjct  121  LPPQAPRAVGADVAGLVLLAGEDGVTEATPGEVHESVDPSRKLFDVTATGAAWQAD---V  177

Query  183  ARAYEFGALATAAQLVGAGQALLEAAVNYAKQRTQFGRAIGSYQAIKHKLADVHIAIELA  242
             RAYEFGALATAAQL+GA +AL + AV+YAKQRTQFGR IGSYQAIKHKLADVHIAIELA
Sbjct  178  KRAYEFGALATAAQLIGAAEALRDGAVDYAKQRTQFGRVIGSYQAIKHKLADVHIAIELA  237

Query  243  CPLVYGAAVSLEPRDVSAAKAAASEAALLAARWALQTHGAIGFTCEHDLSLWLLRVQALH  302
             PLVYGAA++++PRDVSAAKAAASEAALLAAR ALQTHGAIGFT EHDLSL LLRVQAL 
Sbjct  238  RPLVYGAALTMDPRDVSAAKAAASEAALLAARSALQTHGAIGFTQEHDLSLLLLRVQALR  297

Query  303  SAWGTPQEHRRRVLEAL  319
            +AWGTP+EHRRRVLEAL
Sbjct  298  TAWGTPEEHRRRVLEAL  314


>gi|118462358|ref|YP_879878.1| acyl-CoA dehydrogenase [Mycobacterium avium 104]
 gi|254773555|ref|ZP_05215071.1| putative acyl-CoA dehydrogenase [Mycobacterium avium subsp. avium 
ATCC 25291]
 gi|118163645|gb|ABK64542.1| putative acyl-CoA dehydrogenase [Mycobacterium avium 104]
Length=314

 Score =  443 bits (1140),  Expect = 2e-122, Method: Compositional matrix adjust.
 Identities = 249/317 (79%), Positives = 271/317 (86%), Gaps = 3/317 (0%)

Query  3    MEFALNEQQRDFAASIDAALGAADLPGVVRAWAAGDVAPGRKVWQQLANLGVTALGVAEK  62
            M+FAL+EQQRDFAASIDAALGAADLP  VRAWA GD APGRKVW+QLANLGVTAL V EK
Sbjct  1    MKFALDEQQRDFAASIDAALGAADLPAAVRAWAVGDTAPGRKVWEQLANLGVTALAVPEK  60

Query  63   FDGLGASPVDLVVALERLGRWCVPGPVTESIAVAPILLAHDDQAERSHGLASGELIATVA  122
            FDG+ A P+DLVVA+ERLGRWCVPGPV ESIAVAP+LLA D+ AER   LASGELIATVA
Sbjct  61   FDGIEAEPIDLVVAIERLGRWCVPGPVVESIAVAPVLLAGDEHAERCAALASGELIATVA  120

Query  123  MPPRVPRAVDADTAGLVLLAGDGSVTEGTPGDCHRSVDPSRRLYEVAASGQAWRAPKDVV  182
            +PP+VPRAVDA+ AGLVLLA    V E   G  H SVDPSRRLY+V  +G  W+A    V
Sbjct  121  LPPQVPRAVDAEEAGLVLLADQDGVAEAAAGRQHASVDPSRRLYDVEPTGDRWQAD---V  177

Query  183  ARAYEFGALATAAQLVGAGQALLEAAVNYAKQRTQFGRAIGSYQAIKHKLADVHIAIELA  242
             R YEFGALATAAQLVGA +AL +AAV+YAKQRTQFGR IGSYQAIKHKLADVHIAIELA
Sbjct  178  GRGYEFGALATAAQLVGAAEALRDAAVDYAKQRTQFGRVIGSYQAIKHKLADVHIAIELA  237

Query  243  CPLVYGAAVSLEPRDVSAAKAAASEAALLAARWALQTHGAIGFTCEHDLSLWLLRVQALH  302
             PLVYGAA++L+PRDVSAAKAAAS+AALLAAR ALQTHGAIGFT EHDLSL LLRVQA+ 
Sbjct  238  RPLVYGAALTLQPRDVSAAKAAASDAALLAARSALQTHGAIGFTQEHDLSLLLLRVQAVR  297

Query  303  SAWGTPQEHRRRVLEAL  319
            SAWG PQ HRRRVLEAL
Sbjct  298  SAWGPPQVHRRRVLEAL  314


>gi|41406602|ref|NP_959438.1| FadE32 [Mycobacterium avium subsp. paratuberculosis K-10]
 gi|41394951|gb|AAS02821.1| FadE32 [Mycobacterium avium subsp. paratuberculosis K-10]
 gi|336458498|gb|EGO37471.1| acyl-CoA dehydrogenase [Mycobacterium avium subsp. paratuberculosis 
S397]
Length=314

 Score =  443 bits (1139),  Expect = 2e-122, Method: Compositional matrix adjust.
 Identities = 249/317 (79%), Positives = 273/317 (87%), Gaps = 3/317 (0%)

Query  3    MEFALNEQQRDFAASIDAALGAADLPGVVRAWAAGDVAPGRKVWQQLANLGVTALGVAEK  62
            M+FAL+EQQRDFAASIDAALGAADLP  VRAWAAGD APGRKVW+QLANLGVTAL V EK
Sbjct  1    MKFALDEQQRDFAASIDAALGAADLPAAVRAWAAGDTAPGRKVWEQLANLGVTALAVPEK  60

Query  63   FDGLGASPVDLVVALERLGRWCVPGPVTESIAVAPILLAHDDQAERSHGLASGELIATVA  122
            FDG+ A P+DLVVA+ERLGRWCVPGPV ESIAVAP+LLA D+ AER   LASGELIATVA
Sbjct  61   FDGIEAEPIDLVVAIERLGRWCVPGPVVESIAVAPVLLAGDEHAERCAALASGELIATVA  120

Query  123  MPPRVPRAVDADTAGLVLLAGDGSVTEGTPGDCHRSVDPSRRLYEVAASGQAWRAPKDVV  182
            +PP+VPRAVDA+ AGLVLLA    V E   G  H SVDPSRRLY+V A+G  W+A    +
Sbjct  121  LPPQVPRAVDAEEAGLVLLANQDGVAEAAAGWQHASVDPSRRLYDVEATGDRWQAD---I  177

Query  183  ARAYEFGALATAAQLVGAGQALLEAAVNYAKQRTQFGRAIGSYQAIKHKLADVHIAIELA  242
             R YEFGALATAAQLVGA +AL +AAV+YAKQRTQFGR IGSYQAIKHKLADVHIAIELA
Sbjct  178  GRGYEFGALATAAQLVGAAEALRDAAVDYAKQRTQFGRVIGSYQAIKHKLADVHIAIELA  237

Query  243  CPLVYGAAVSLEPRDVSAAKAAASEAALLAARWALQTHGAIGFTCEHDLSLWLLRVQALH  302
             PLVYGAA++L+PRDVSAAKAAAS+AALLAAR ALQTHGAIGFT EHDLSL LLRVQA+ 
Sbjct  238  RPLVYGAALTLQPRDVSAAKAAASDAALLAARSALQTHGAIGFTQEHDLSLLLLRVQAVR  297

Query  303  SAWGTPQEHRRRVLEAL  319
            SAWG PQ HR+RVLEAL
Sbjct  298  SAWGPPQVHRQRVLEAL  314


>gi|118619308|ref|YP_907640.1| acyl-CoA dehydrogenase FadE32 [Mycobacterium ulcerans Agy99]
 gi|118571418|gb|ABL06169.1| acyl-CoA dehydrogenase FadE32 [Mycobacterium ulcerans Agy99]
Length=311

 Score =  436 bits (1121),  Expect = 3e-120, Method: Compositional matrix adjust.
 Identities = 253/317 (80%), Positives = 274/317 (87%), Gaps = 6/317 (1%)

Query  3    MEFALNEQQRDFAASIDAALGAADLPGVVRAWAAGDVAPGRKVWQQLANLGVTALGVAEK  62
            MEFAL+EQQRDFAASIDAAL AADLP  VRAW+AGDVAPG KVW+QLANLGVTAL V+EK
Sbjct  1    MEFALDEQQRDFAASIDAALAAADLPAAVRAWSAGDVAPGHKVWEQLANLGVTALTVSEK  60

Query  63   FDGLGASPVDLVVALERLGRWCVPGPVTESIAVAPILLAHDDQAERSHGLASGELIATVA  122
            FDGLGA P+DLVVALERLGRWCVPGPV ESIAVAP+LLA DD   RS GLA GELIATVA
Sbjct  61   FDGLGAHPIDLVVALERLGRWCVPGPVAESIAVAPVLLADDD---RSAGLACGELIATVA  117

Query  123  MPPRVPRAVDADTAGLVLLAGDGSVTEGTPGDCHRSVDPSRRLYEVAASGQAWRAPKDVV  182
            +PP  PRAVDADTAGLVL+AG+  V E    DCH S+DPSRR Y+V A+G AW+A    V
Sbjct  118  LPPHAPRAVDADTAGLVLVAGESGVCEAAVADCHESIDPSRRSYDVTATGAAWQAD---V  174

Query  183  ARAYEFGALATAAQLVGAGQALLEAAVNYAKQRTQFGRAIGSYQAIKHKLADVHIAIELA  242
             RAYEFGALATAAQL+GA +ALL+A V+YAKQRTQFGR IGSYQAIKHKLADVHIAIELA
Sbjct  175  KRAYEFGALATAAQLIGAAEALLDATVDYAKQRTQFGRVIGSYQAIKHKLADVHIAIELA  234

Query  243  CPLVYGAAVSLEPRDVSAAKAAASEAALLAARWALQTHGAIGFTCEHDLSLWLLRVQALH  302
             PLV+GAA+SL+PRDVSAAK AA  AA LAAR ALQTHGAIGFT EHDLSLWLLRVQAL 
Sbjct  235  RPLVHGAALSLQPRDVSAAKVAAGGAARLAARSALQTHGAIGFTQEHDLSLWLLRVQALR  294

Query  303  SAWGTPQEHRRRVLEAL  319
            SAWGTP+ HRRRVLEAL
Sbjct  295  SAWGTPEVHRRRVLEAL  311


>gi|183985020|ref|YP_001853311.1| acyl-CoA dehydrogenase FadE32 [Mycobacterium marinum M]
 gi|183178346|gb|ACC43456.1| acyl-CoA dehydrogenase FadE32 [Mycobacterium marinum M]
Length=311

 Score =  434 bits (1117),  Expect = 7e-120, Method: Compositional matrix adjust.
 Identities = 252/317 (80%), Positives = 276/317 (88%), Gaps = 6/317 (1%)

Query  3    MEFALNEQQRDFAASIDAALGAADLPGVVRAWAAGDVAPGRKVWQQLANLGVTALGVAEK  62
            MEFAL+EQQRDFAASIDAAL AADLP  VRAW+AGDVAPG KVW+QLANLGVTAL V+EK
Sbjct  1    MEFALDEQQRDFAASIDAALAAADLPAAVRAWSAGDVAPGHKVWEQLANLGVTALTVSEK  60

Query  63   FDGLGASPVDLVVALERLGRWCVPGPVTESIAVAPILLAHDDQAERSHGLASGELIATVA  122
            FDGLGA P+DLVVALERLGRWCVPGPV ESIAVAP+LLA DD   RS GLA GELIATVA
Sbjct  61   FDGLGAHPIDLVVALERLGRWCVPGPVAESIAVAPVLLADDD---RSAGLACGELIATVA  117

Query  123  MPPRVPRAVDADTAGLVLLAGDGSVTEGTPGDCHRSVDPSRRLYEVAASGQAWRAPKDVV  182
            +PP  PRAVDADTAGLVL+AG+  V+E    +CH S+DPSRR Y+V A+G  W+A    V
Sbjct  118  LPPHAPRAVDADTAGLVLVAGESGVSEAAVANCHESIDPSRRSYDVTATGATWQAD---V  174

Query  183  ARAYEFGALATAAQLVGAGQALLEAAVNYAKQRTQFGRAIGSYQAIKHKLADVHIAIELA  242
             RAYEFGALATAAQL+GA +ALL+A V+YAKQRTQFGR IGSYQAIKHKLADVHIAIELA
Sbjct  175  KRAYEFGALATAAQLIGAAEALLDATVDYAKQRTQFGRVIGSYQAIKHKLADVHIAIELA  234

Query  243  CPLVYGAAVSLEPRDVSAAKAAASEAALLAARWALQTHGAIGFTCEHDLSLWLLRVQALH  302
             PLV+GAA+SL+PRDVSAAK AA +AALLAAR ALQTHGAIGFT EHDLSLWLLRVQAL 
Sbjct  235  RPLVHGAALSLQPRDVSAAKVAAGDAALLAARSALQTHGAIGFTQEHDLSLWLLRVQALR  294

Query  303  SAWGTPQEHRRRVLEAL  319
            SAWGTP+ HRRRVLEAL
Sbjct  295  SAWGTPEVHRRRVLEAL  311


>gi|126437645|ref|YP_001073336.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium 
sp. JLS]
 gi|126237445|gb|ABO00846.1| acyl-CoA dehydrogenase domain protein [Mycobacterium sp. JLS]
Length=317

 Score =  417 bits (1072),  Expect = 1e-114, Method: Compositional matrix adjust.
 Identities = 233/323 (73%), Positives = 263/323 (82%), Gaps = 12/323 (3%)

Query  3    MEFALNEQQRDFAASIDAALGAADLPGVVRAWAAGDVAPGRKVWQQLANLGVTALGVAEK  62
            M F L++QQRDFAASIDAALGAAD+P  VRAW+ GD A GRKVW  LA+LGVTAL VAE+
Sbjct  1    MNFELDDQQRDFAASIDAALGAADVPAAVRAWSEGDTAHGRKVWATLADLGVTALMVAEE  60

Query  63   FDGLGASPVDLVVALERLGRWCVPGPVTESIAVAPILLAHDDQAERSHGLASGELIATVA  122
            +DG+ A+PVDLVVA ERLGRWCVPGPV ES+AVAP+LL  D   ERS  LA+GEL+ TVA
Sbjct  61   YDGIDATPVDLVVAAERLGRWCVPGPVVESVAVAPVLLRGD---ERSAALAAGELVVTVA  117

Query  123  MPPRVPRAVDADTAGLVLLAGDGSVTEGTPGDCHRSVDPSRRLYEVAASGQAWRAPKDVV  182
            +PP VPRA+DAD+AGLVLLA DGSV+E T    H SVDP+R+L+EV ASG    A  D  
Sbjct  118  LPPHVPRALDADSAGLVLLAQDGSVSEATAATQHESVDPARKLFEVTASGAVREADVD--  175

Query  183  ARAYEFGALATAAQLVGAGQALLEAAVNYAKQRTQFGRAIGSYQAIKHKLADVHIAIELA  242
             RA+EFG LATAAQLVGA QA+L+ +V+YAKQR QFGRAIGSYQAIKHKLADVHIA+ELA
Sbjct  176  -RAFEFGVLATAAQLVGAAQAMLDQSVDYAKQRHQFGRAIGSYQAIKHKLADVHIAVELA  234

Query  243  CPLVYGAAVSL------EPRDVSAAKAAASEAALLAARWALQTHGAIGFTCEHDLSLWLL  296
             PLVYGAA+SL        RDVSAAK AAS+AA+LAAR ALQTHGAIGFT EHDLSLWLL
Sbjct  235  RPLVYGAALSLGDGSPDTARDVSAAKVAASDAAMLAARSALQTHGAIGFTHEHDLSLWLL  294

Query  297  RVQALHSAWGTPQEHRRRVLEAL  319
            RVQAL SAWG+P  HR RVLEA 
Sbjct  295  RVQALRSAWGSPTWHRTRVLEAF  317


>gi|108801659|ref|YP_641856.1| acyl-CoA dehydrogenase-like protein [Mycobacterium sp. MCS]
 gi|119870810|ref|YP_940762.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium 
sp. KMS]
 gi|108772078|gb|ABG10800.1| acyl-CoA dehydrogenase-like protein [Mycobacterium sp. MCS]
 gi|119696899|gb|ABL93972.1| acyl-CoA dehydrogenase domain protein [Mycobacterium sp. KMS]
Length=317

 Score =  415 bits (1066),  Expect = 5e-114, Method: Compositional matrix adjust.
 Identities = 232/323 (72%), Positives = 262/323 (82%), Gaps = 12/323 (3%)

Query  3    MEFALNEQQRDFAASIDAALGAADLPGVVRAWAAGDVAPGRKVWQQLANLGVTALGVAEK  62
            M F L++QQRDFAASIDAALGAAD+P  VRAW+ GD A GRKVW  LA+LGVTAL VAE+
Sbjct  1    MNFELDDQQRDFAASIDAALGAADVPAAVRAWSEGDTAHGRKVWATLADLGVTALMVAEE  60

Query  63   FDGLGASPVDLVVALERLGRWCVPGPVTESIAVAPILLAHDDQAERSHGLASGELIATVA  122
            +DG+ A+PVDLVVA ERLGRWCVPGPV ES+AVAP+LL  D   ERS  LA+GEL+  VA
Sbjct  61   YDGIDATPVDLVVAAERLGRWCVPGPVVESVAVAPVLLRGD---ERSAALAAGELVVAVA  117

Query  123  MPPRVPRAVDADTAGLVLLAGDGSVTEGTPGDCHRSVDPSRRLYEVAASGQAWRAPKDVV  182
            +PP VPRA+DAD+AGLVLLA DGSV+E T    H SVDP+R+L+EV ASG    A  D  
Sbjct  118  LPPHVPRALDADSAGLVLLAQDGSVSEATAATQHESVDPARKLFEVTASGAVREADVD--  175

Query  183  ARAYEFGALATAAQLVGAGQALLEAAVNYAKQRTQFGRAIGSYQAIKHKLADVHIAIELA  242
             RA+EFG LATAAQLVGA QA+L+ +V+YAKQR QFGRAIGSYQAIKHKLADVHIA+ELA
Sbjct  176  -RAFEFGVLATAAQLVGAAQAMLDQSVDYAKQRHQFGRAIGSYQAIKHKLADVHIAVELA  234

Query  243  CPLVYGAAVSL------EPRDVSAAKAAASEAALLAARWALQTHGAIGFTCEHDLSLWLL  296
             PLVYGAA+SL        RDVSAAK AAS+AA+LAAR ALQTHGAIGFT EHDLSLWLL
Sbjct  235  RPLVYGAALSLGDGSPDTARDVSAAKVAASDAAMLAARSALQTHGAIGFTHEHDLSLWLL  294

Query  297  RVQALHSAWGTPQEHRRRVLEAL  319
            RVQAL SAWG+P  HR RVLEA 
Sbjct  295  RVQALRSAWGSPTWHRTRVLEAF  317


>gi|118468829|ref|YP_890239.1| acyl-CoA dehydrogenase [Mycobacterium smegmatis str. MC2 155]
 gi|118170116|gb|ABK71012.1| putative acyl-CoA dehydrogenase [Mycobacterium smegmatis str. 
MC2 155]
Length=318

 Score =  411 bits (1056),  Expect = 7e-113, Method: Compositional matrix adjust.
 Identities = 240/323 (75%), Positives = 260/323 (81%), Gaps = 12/323 (3%)

Query  3    MEFALNEQQRDFAASIDAALGAADLPGVVRAWAAGDVAPGRKVWQQLANLGVTALGVAEK  62
            M F  +EQQRDFAASIDAALGA+D+P  VRAW  GD APGRKVW QL +LGVTAL V EK
Sbjct  1    MNFETDEQQRDFAASIDAALGASDVPAAVRAWGEGDTAPGRKVWAQLTDLGVTALLVPEK  60

Query  63   FDGLGASPVDLVVALERLGRWCVPGPVTESIAVAPILLAHDDQAERSHGLASGELIATVA  122
            FDG+ A P DLVVALERLG W VPGPVTESIAVAPILLA D   ER   LASGELIATVA
Sbjct  61   FDGIEAHPTDLVVALERLGYWGVPGPVTESIAVAPILLADD---ERCGALASGELIATVA  117

Query  123  MPPRVPRAVDADTAGLVLLAGDGSVTEGTPGDCHRSVDPSRRLYEVAASGQAWRAPKDVV  182
            +PP+VPRAVDADTAGL+LLA DG V +G+ G  H SVDP+R+L++VAASG A  A     
Sbjct  118  LPPQVPRAVDADTAGLILLAQDGQVHDGSAGASHESVDPTRKLFDVAASGDARTAD---T  174

Query  183  ARAYEFGALATAAQLVGAGQALLEAAVNYAKQRTQFGRAIGSYQAIKHKLADVHIAIELA  242
            A AYEFG LATAAQLVGAGQA+L+ AV YAKQRTQFGR IGSYQAIKHKLADVHIA+ELA
Sbjct  175  ATAYEFGVLATAAQLVGAGQAMLDQAVEYAKQRTQFGRVIGSYQAIKHKLADVHIAVELA  234

Query  243  CPLVYGAAVSL------EPRDVSAAKAAASEAALLAARWALQTHGAIGFTCEHDLSLWLL  296
             PLVYGAA+SL        RDVSAAK AA++AALLAAR ALQTHGAIGFT EHDLSL LL
Sbjct  235  RPLVYGAALSLADGSSDTARDVSAAKVAAADAALLAARSALQTHGAIGFTQEHDLSLLLL  294

Query  297  RVQALHSAWGTPQEHRRRVLEAL  319
            RVQAL  AWG P  HRRRVLE L
Sbjct  295  RVQALRPAWGDPALHRRRVLEGL  317


>gi|120406236|ref|YP_956065.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium 
vanbaalenii PYR-1]
 gi|119959054|gb|ABM16059.1| acyl-CoA dehydrogenase domain protein [Mycobacterium vanbaalenii 
PYR-1]
Length=319

 Score =  405 bits (1041),  Expect = 4e-111, Method: Compositional matrix adjust.
 Identities = 235/323 (73%), Positives = 262/323 (82%), Gaps = 12/323 (3%)

Query  3    MEFALNEQQRDFAASIDAALGAADLPGVVRAWAAGDVAPGRKVWQQLANLGVTALGVAEK  62
            M F ++EQQRDFAASIDAALGAAD+P  VRAW  GD APGRKVW QLA+LGVTAL V EK
Sbjct  1    MNFEIDEQQRDFAASIDAALGAADVPAAVRAWGEGDTAPGRKVWSQLADLGVTALMVPEK  60

Query  63   FDGLGASPVDLVVALERLGRWCVPGPVTESIAVAPILLAHDDQAERSHGLASGELIATVA  122
            FDG+ A PVDLVVALERLGRW VPGPV ES+AVAP+LLA DD   RS  LA+GELIATVA
Sbjct  61   FDGIEAHPVDLVVALERLGRWNVPGPVAESVAVAPVLLADDD---RSAALAAGELIATVA  117

Query  123  MPPRVPRAVDADTAGLVLLAGDGSVTEGTPGDCHRSVDPSRRLYEVAASGQAWRAPKDVV  182
             PP VPRAV+ADTAGL+LLA DGSV+  + G  H SVDPSR+L+EV+A G   R   D V
Sbjct  118  APPLVPRAVNADTAGLILLAEDGSVSNASAGAEHESVDPSRKLFEVSAYGD--RKAAD-V  174

Query  183  ARAYEFGALATAAQLVGAGQALLEAAVNYAKQRTQFGRAIGSYQAIKHKLADVHIAIELA  242
            ARA+EFGALAT+A LVGA QA+L+A+V YAKQR+QFG  IG+YQAIKHKLADV IA+ELA
Sbjct  175  ARAFEFGALATSALLVGAAQAMLDASVEYAKQRSQFGTVIGTYQAIKHKLADVLIAVELA  234

Query  243  CPLVYGAAVSLEP------RDVSAAKAAASEAALLAARWALQTHGAIGFTCEHDLSLWLL  296
             PLVYGAA+SL        RDVSAAK AA++AALLAAR +LQTHGAIGFT EHDLSL LL
Sbjct  235  RPLVYGAALSLADGSTDTGRDVSAAKVAAADAALLAARSSLQTHGAIGFTQEHDLSLLLL  294

Query  297  RVQALHSAWGTPQEHRRRVLEAL  319
            RVQAL  AWG P  HRRRVLEAL
Sbjct  295  RVQALRPAWGDPTWHRRRVLEAL  317


>gi|145222070|ref|YP_001132748.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium 
gilvum PYR-GCK]
 gi|315446188|ref|YP_004079067.1| acyl-CoA dehydrogenase [Mycobacterium sp. Spyr1]
 gi|145214556|gb|ABP43960.1| acyl-CoA dehydrogenase domain protein [Mycobacterium gilvum PYR-GCK]
 gi|315264491|gb|ADU01233.1| acyl-CoA dehydrogenase [Mycobacterium sp. Spyr1]
Length=319

 Score =  401 bits (1031),  Expect = 7e-110, Method: Compositional matrix adjust.
 Identities = 234/323 (73%), Positives = 258/323 (80%), Gaps = 12/323 (3%)

Query  3    MEFALNEQQRDFAASIDAALGAADLPGVVRAWAAGDVAPGRKVWQQLANLGVTALGVAEK  62
            M F +++QQRDFAASIDAALGAADLP  VRAW  GD APGRKVW QL +LGVTAL V EK
Sbjct  1    MNFEIDDQQRDFAASIDAALGAADLPAAVRAWGEGDTAPGRKVWSQLTDLGVTALMVPEK  60

Query  63   FDGLGASPVDLVVALERLGRWCVPGPVTESIAVAPILLAHDDQAERSHGLASGELIATVA  122
            FDG+ A PVDLVVALERLGRW VPGPVTESIAVAPILL  DD   R   LASGELIATVA
Sbjct  61   FDGIEAHPVDLVVALERLGRWNVPGPVTESIAVAPILLGDDD---RVGALASGELIATVA  117

Query  123  MPPRVPRAVDADTAGLVLLAGDGSVTEGTPGDCHRSVDPSRRLYEVAASGQAWRAPKDVV  182
             PP V RAVDADTAGL+LLA +G+V +   G  H SVDP+R+L+EV ASG+A  A    V
Sbjct  118  APPLVSRAVDADTAGLILLATEGAVADAEMGTQHESVDPARKLFEVTASGEARAAD---V  174

Query  183  ARAYEFGALATAAQLVGAGQALLEAAVNYAKQRTQFGRAIGSYQAIKHKLADVHIAIELA  242
             RA+EFGALATAAQLVGA QA+L+A+V YAKQR+QFG  IG+YQAIKHKLADV IA+ELA
Sbjct  175  ERAFEFGALATAAQLVGAAQAMLDASVEYAKQRSQFGTIIGTYQAIKHKLADVLIAVELA  234

Query  243  CPLVYGAAVSL------EPRDVSAAKAAASEAALLAARWALQTHGAIGFTCEHDLSLWLL  296
             PLVYGAA+SL        RDVSAAK AA++AALLAAR +LQTHGAIGFT EHDLSL LL
Sbjct  235  RPLVYGAALSLADGSQDTARDVSAAKVAAADAALLAARSSLQTHGAIGFTQEHDLSLLLL  294

Query  297  RVQALHSAWGTPQEHRRRVLEAL  319
            RVQAL  AWG P  HR RVLEAL
Sbjct  295  RVQALRPAWGDPTWHRHRVLEAL  317


>gi|169627697|ref|YP_001701346.1| acyl-CoA dehydrogenase FadE [Mycobacterium abscessus ATCC 19977]
 gi|169239664|emb|CAM60692.1| Probable acyl-CoA dehydrogenase FadE [Mycobacterium abscessus]
Length=321

 Score =  357 bits (916),  Expect = 2e-96, Method: Compositional matrix adjust.
 Identities = 213/329 (65%), Positives = 250/329 (76%), Gaps = 20/329 (6%)

Query  3    MEFALNEQQRDFAASIDAALGAADLPGVVRAWAAGDVAPGRKVWQQLANLGVTALGVAEK  62
            M+F L+ QQRDFAASIDAAL  AD+P   RAWAAG+  PG  VW  LA LGVTAL V+EK
Sbjct  1    MKFDLDTQQRDFAASIDAALSVADVPAAARAWAAGNHGPGLAVWSTLAELGVTALAVSEK  60

Query  63   FDGLGASPVDLVVALERLGRWCVPGPVTESIAVAPILL-AHDDQAERSHGLASGELIATV  121
            +DG+GA PVDLVVALE LG+W VPGPV ES+AVAP+LL +H+D AE S  LASGELIATV
Sbjct  61   YDGIGAHPVDLVVALEGLGKWAVPGPVVESVAVAPVLLSSHEDGAEPSTRLASGELIATV  120

Query  122  AMPPRVPRAVDADTAGLVLLAGDGSVTEGTPGDCHRSVDPSRRLYEVAASGQAWRAPKDV  181
            A PP  PRA+DAD AGLVL+A D  + E   G  H S+D +RR+++V         PK+ 
Sbjct  121  AAPPIAPRALDADIAGLVLIADDIGIREAQAGAQHESIDATRRVFDV--------QPKEA  172

Query  182  -----VARAYEFGALATAAQLVGAGQALLEAAVNYAKQRTQFGRAIGSYQAIKHKLADVH  236
                  +RA +FG LA +AQL+GAGQALL+ AV YAKQR+QFGR IGSYQA+KHKLADVH
Sbjct  173  GISLDTSRAIDFGVLAISAQLIGAGQALLDRAVAYAKQRSQFGRPIGSYQAVKHKLADVH  232

Query  237  IAIELACPLVYGAAVSLEP------RDVSAAKAAASEAALLAARWALQTHGAIGFTCEHD  290
            IA+ELA PLVYGAA+SL        RD SAAK AA++AA LAAR ALQTHGAIGFT E+D
Sbjct  233  IALELARPLVYGAALSLADQSPTAARDASAAKVAAAKAAYLAARSALQTHGAIGFTAEYD  292

Query  291  LSLWLLRVQALHSAWGTPQEHRRRVLEAL  319
            LSLW+L+V+AL SAWGT + HR RVLEAL
Sbjct  293  LSLWILKVRALTSAWGTSEWHRARVLEAL  321


>gi|226304376|ref|YP_002764334.1| acyl-CoA dehydrogenase [Rhodococcus erythropolis PR4]
 gi|226183491|dbj|BAH31595.1| putative acyl-CoA dehydrogenase [Rhodococcus erythropolis PR4]
Length=321

 Score =  340 bits (872),  Expect = 2e-91, Method: Compositional matrix adjust.
 Identities = 185/323 (58%), Positives = 228/323 (71%), Gaps = 11/323 (3%)

Query  3    MEFALNEQQRDFAASIDAALGAADLPGVVRAWAAGDVAPGRKVWQQLANLGVTALGVAEK  62
            M FAL+   +DFAASIDA L  +D+P V+R+W  GD  PG+K+WQ+LA  GV  L ++E+
Sbjct  1    MRFALDSSHQDFAASIDALLTKSDMPSVIRSWNDGDTEPGKKLWQRLAETGVNGLVISEE  60

Query  63   FDGLGASPVDLVVALERLGRWCVPGPVTESIAVAPILLAHDDQAERSHGLASGELIATVA  122
             DGLGA  VDLVVALE+LGR  VPGPV E+IAVAP LLA     ER   LA G L ATVA
Sbjct  61   HDGLGADAVDLVVALEQLGRHAVPGPVVETIAVAPTLLA-SVAPERLSALAEGSL-ATVA  118

Query  123  MPPRVPRAVDADTAGLVLLAGDGSVTEGTPGDCHRSVDPSRRLYEVAASGQAWRAPKDVV  182
             PPR P A+DA+   LVLLA DG+V+ G PG+   SVD SR+LYEV+A      A     
Sbjct  119  APPRTPFALDANAVDLVLLAQDGTVSLGVPGEAKASVDLSRKLYEVSAGESLGSAD---F  175

Query  183  ARAYEFGALATAAQLVGAGQALLEAAVNYAKQRTQFGRAIGSYQAIKHKLADVHIAIELA  242
            + A++ GALATAAQL G GQ LLE    YAKQR QFG+ IG +QA+KH LA+V +++E+A
Sbjct  176  SAAFDMGALATAAQLQGLGQTLLEVTTEYAKQRKQFGKVIGQFQAMKHHLAEVAVSLEMA  235

Query  243  CPLVYGAAVSLE------PRDVSAAKAAASEAALLAARWALQTHGAIGFTCEHDLSLWLL  296
             PL++GAA+S+        RD+SAAK A  +AA  AAR  LQ HGAIG+T EHDLSLWL 
Sbjct  236  RPLLHGAALSVRDQSADASRDISAAKVACGDAAYKAARVGLQVHGAIGYTMEHDLSLWLT  295

Query  297  RVQALHSAWGTPQEHRRRVLEAL  319
            +V+AL +AWGTP EHR RV+EAL
Sbjct  296  KVRALLTAWGTPSEHRARVVEAL  318


>gi|229494542|ref|ZP_04388305.1| Acyl-CoA dehydrogenase domain protein [Rhodococcus erythropolis 
SK121]
 gi|229318904|gb|EEN84762.1| Acyl-CoA dehydrogenase domain protein [Rhodococcus erythropolis 
SK121]
Length=321

 Score =  338 bits (867),  Expect = 6e-91, Method: Compositional matrix adjust.
 Identities = 185/323 (58%), Positives = 227/323 (71%), Gaps = 11/323 (3%)

Query  3    MEFALNEQQRDFAASIDAALGAADLPGVVRAWAAGDVAPGRKVWQQLANLGVTALGVAEK  62
            M FAL+   +DFAASIDA L  +D+P V+R+W  GD  PG+K+WQ+LA  GV  L ++E+
Sbjct  1    MRFALDSSHQDFAASIDALLTKSDMPAVIRSWNDGDTEPGKKLWQRLAETGVNGLVISEE  60

Query  63   FDGLGASPVDLVVALERLGRWCVPGPVTESIAVAPILLAHDDQAERSHGLASGELIATVA  122
             DGLGA  VDLVVALE+LGR  VPGPV E+IAVAP LLA     ER   LA G L ATVA
Sbjct  61   HDGLGADAVDLVVALEQLGRHAVPGPVVETIAVAPTLLA-SVAPERLSALAEGSL-ATVA  118

Query  123  MPPRVPRAVDADTAGLVLLAGDGSVTEGTPGDCHRSVDPSRRLYEVAASGQAWRAPKDVV  182
             PP  P A+DAD   LVLLA DG+V+ G PG+   SVD SR+LYEV+A      A     
Sbjct  119  APPHTPFALDADAVDLVLLAQDGAVSLGVPGEAKASVDLSRKLYEVSAGESLGSAD---F  175

Query  183  ARAYEFGALATAAQLVGAGQALLEAAVNYAKQRTQFGRAIGSYQAIKHKLADVHIAIELA  242
            + A++ GALATAAQL G GQ LLE    YAKQR QFG+ IG +QA+KH LA+V +++E+A
Sbjct  176  SAAFDMGALATAAQLQGLGQTLLEVTTEYAKQRKQFGKVIGQFQAMKHHLAEVAVSLEMA  235

Query  243  CPLVYGAAVSLE------PRDVSAAKAAASEAALLAARWALQTHGAIGFTCEHDLSLWLL  296
             PL++GAA+S+        RD+SAAK A  +AA  AAR  LQ HGAIG+T EHDLSLWL 
Sbjct  236  RPLLHGAALSVRDQSADASRDISAAKVACGDAAYKAARVGLQVHGAIGYTMEHDLSLWLT  295

Query  297  RVQALHSAWGTPQEHRRRVLEAL  319
            +V+AL +AWGTP EHR RV+EAL
Sbjct  296  KVRALLTAWGTPSEHRARVVEAL  318


>gi|333992359|ref|YP_004524973.1| acyl-CoA dehydrogenase [Mycobacterium sp. JDM601]
 gi|333488327|gb|AEF37719.1| acyl-CoA dehydrogenase FadE32 [Mycobacterium sp. JDM601]
Length=321

 Score =  336 bits (862),  Expect = 2e-90, Method: Compositional matrix adjust.
 Identities = 219/324 (68%), Positives = 250/324 (78%), Gaps = 10/324 (3%)

Query  3    MEFALNEQQRDFAASIDAALGAADLPGVVRAWAAGDVAPGRKVWQQLANLGVTALGVAEK  62
            M+F L++ QRDFAASIDAAL AAD+PG VRAW+ G+   GR+VW QLA LGVTAL V E+
Sbjct  1    MKFDLDQDQRDFAASIDAALAAADVPGAVRAWSHGEPDAGRRVWNQLAELGVTALAVPEE  60

Query  63   FDGLGASPVDLVVALERLGRWCVPGPVTESIAVAPILLA-HDDQAERSHGLASGELIATV  121
             DG+GA PVDL++A+E LGRWCVPGPV ESIAVAP+LLA   D A +   LA+GELIATV
Sbjct  61   HDGIGAHPVDLMLAIEALGRWCVPGPVVESIAVAPVLLAGAPDAAAQLAALAAGELIATV  120

Query  122  AMPPRVPRAVDADTAGLVLLAGDGSVTEGTPGDCHRSVDPSRRLYEVAASGQAWRAPKDV  181
            A+PP  PRA+DAD A LVL A  G       G  H SVDPSR +++V A+G +W A    
Sbjct  121  ALPPHTPRALDADRADLVLHAESGRAGTAQAGTRHASVDPSRGVFDVTATGDSWDAD---  177

Query  182  VARAYEFGALATAAQLVGAGQALLEAAVNYAKQRTQFGRAIGSYQAIKHKLADVHIAIEL  241
             ARAYE GALATAAQL+GAGQA+L A+V+YAKQRTQFGR IG YQAIKHKLADVHIA+EL
Sbjct  178  TARAYEVGALATAAQLIGAGQAMLNASVDYAKQRTQFGRVIGGYQAIKHKLADVHIALEL  237

Query  242  ACPLVYGAAVSLEP------RDVSAAKAAASEAALLAARWALQTHGAIGFTCEHDLSLWL  295
            A PLVYGAA+SL        RDVSAAK AAS+AALLAA  ALQTHGAIGFT E DLSLWL
Sbjct  238  ARPLVYGAALSLSQDSADTARDVSAAKVAASDAALLAAHSALQTHGAIGFTSECDLSLWL  297

Query  296  LRVQALHSAWGTPQEHRRRVLEAL  319
            LRVQA+  AWG    HRRRVLEA+
Sbjct  298  LRVQAVRPAWGDVTAHRRRVLEAI  321


>gi|226363947|ref|YP_002781729.1| acyl-CoA dehydrogenase [Rhodococcus opacus B4]
 gi|226242436|dbj|BAH52784.1| putative acyl-CoA dehydrogenase [Rhodococcus opacus B4]
Length=322

 Score =  318 bits (815),  Expect = 8e-85, Method: Compositional matrix adjust.
 Identities = 179/323 (56%), Positives = 223/323 (70%), Gaps = 11/323 (3%)

Query  3    MEFALNEQQRDFAASIDAALGAADLPGVVRAWAAGDVAPGRKVWQQLANLGVTALGVAEK  62
            M F L+   +DFA+SIDA L  AD+P V+R+W  GD   G KVWQ+LA  GV  L +A++
Sbjct  1    MRFTLDSSHQDFASSIDALLSKADMPSVIRSWNTGDTGAGLKVWQRLAETGVNGLLIADE  60

Query  63   FDGLGASPVDLVVALERLGRWCVPGPVTESIAVAPILLAHDDQAERSHGLASGELIATVA  122
             DGLGA  VDLVVA+E+LGR  VPGPV E++AVAP LLA     +R   LASG L ATVA
Sbjct  61   HDGLGADAVDLVVAVEQLGRHAVPGPVAETVAVAPALLAQ-VAPDRLSALASGSL-ATVA  118

Query  123  MPPRVPRAVDADTAGLVLLAGDGSVTEGTPGDCHRSVDPSRRLYEVAASGQAWRAPKDVV  182
             PP VP AVDAD+  LVLL    +V+ G PG    SVD SRRL+ + A+     A  D  
Sbjct  119  APPHVPFAVDADSVDLVLLVDGSTVSIGAPGAVQNSVDQSRRLFPLTATDVLGDA--DFT  176

Query  183  ARAYEFGALATAAQLVGAGQALLEAAVNYAKQRTQFGRAIGSYQAIKHKLADVHIAIELA  242
            A A++ GALATAAQL G GQ LL+   +YAKQR QFG+ IG +QAIKH LA+V + +E++
Sbjct  177  A-AFDLGALATAAQLQGLGQTLLDVTTDYAKQRKQFGKVIGQFQAIKHHLAEVAVGLEMS  235

Query  243  CPLVYGAAVSL------EPRDVSAAKAAASEAALLAARWALQTHGAIGFTCEHDLSLWLL  296
             PL++GAA+++        RDVSAAK A  +AA  AAR ALQ HGAIG+T EHDLSLWL 
Sbjct  236  RPLLHGAALAVRDGSADSSRDVSAAKVACGDAAYRAARVALQVHGAIGYTQEHDLSLWLT  295

Query  297  RVQALHSAWGTPQEHRRRVLEAL  319
            +V+AL +AWGTP  HR RV++AL
Sbjct  296  KVRALVTAWGTPAFHRGRVVDAL  318


>gi|111021564|ref|YP_704536.1| acyl-CoA dehydrogenase [Rhodococcus jostii RHA1]
 gi|110821094|gb|ABG96378.1| probable acyl-CoA dehydrogenase [Rhodococcus jostii RHA1]
Length=322

 Score =  318 bits (814),  Expect = 1e-84, Method: Compositional matrix adjust.
 Identities = 182/326 (56%), Positives = 223/326 (69%), Gaps = 17/326 (5%)

Query  3    MEFALNEQQRDFAASIDAALGAADLPGVVRAWAAGDVAPGRKVWQQLANLGVTALGVAEK  62
            M F L+   +DFA+SIDA L  AD+P V+R+W  GD  PG KVWQ+LA  GV  L VA++
Sbjct  1    MRFTLDSSHQDFASSIDALLSKADMPAVIRSWNTGDTGPGLKVWQRLAETGVNGLLVADE  60

Query  63   FDGLGASPVDLVVALERLGRWCVPGPVTESIAVAPILLAHDDQAERSHGLASGELIATVA  122
             DGLGA  VDLVVA+E+LGR  VPGPV E++AVAP LLA     +R   LASG L ATVA
Sbjct  61   HDGLGADAVDLVVAVEQLGRHAVPGPVAETVAVAPALLAQVG-PDRLAALASGSL-ATVA  118

Query  123  MPPRVPRAVDADTAGLVLLAGDGSVTEGTPGDCHRSVDPSRRLYEVAAS---GQAWRAPK  179
              P VP AVDAD+A LVLL    +V+ G  G    SVD SRRLY + A    G A  AP 
Sbjct  119  AAPHVPFAVDADSADLVLLVDGATVSLGQAGAVQNSVDQSRRLYPLTAGDAFGDADFAP-  177

Query  180  DVVARAYEFGALATAAQLVGAGQALLEAAVNYAKQRTQFGRAIGSYQAIKHKLADVHIAI  239
                 A++ GALATAAQL G GQ LL+   +YAKQR QFG+ IG +QAIKH LA+V + +
Sbjct  178  -----AFDLGALATAAQLQGLGQTLLDVTTDYAKQRKQFGKVIGQFQAIKHHLAEVAVGL  232

Query  240  ELACPLVYGAAVSL------EPRDVSAAKAAASEAALLAARWALQTHGAIGFTCEHDLSL  293
            E++ PL++GAA+S+        RDVSAAK A  +AA  AAR ALQ HGAIG+T EHDLSL
Sbjct  233  EMSRPLLHGAALSVRDGSVDSSRDVSAAKVACGDAAYRAARVALQVHGAIGYTQEHDLSL  292

Query  294  WLLRVQALHSAWGTPQEHRRRVLEAL  319
            WL +V+AL +AWGTP  HR RV+++L
Sbjct  293  WLTKVRALVTAWGTPAYHRGRVVDSL  318


>gi|302528337|ref|ZP_07280679.1| acyl-CoA dehydrogenase domain-containing protein [Streptomyces 
sp. AA4]
 gi|302437232|gb|EFL09048.1| acyl-CoA dehydrogenase domain-containing protein [Streptomyces 
sp. AA4]
Length=317

 Score =  280 bits (717),  Expect = 2e-73, Method: Compositional matrix adjust.
 Identities = 169/317 (54%), Positives = 207/317 (66%), Gaps = 4/317 (1%)

Query  3    MEFALNEQQRDFAASIDAALGAADLPGVVRAWAAGDVAPGRKVWQQLANLGVTALGVAEK  62
            M+F L+ +QR FA ++DA LGAAD+PGV R+WAA    PG K+W+QLA LGVTALGV E 
Sbjct  1    MKFRLSAEQRAFAEALDALLGAADVPGVTRSWAAKRPEPGLKLWKQLAELGVTALGVPED  60

Query  63   FDGLGASPVDLVVALERLGRWCVPGPVTESIAVAPILLAHDDQAERSHGLASGELIATVA  122
              G+G + VDL+VA ERLG   VPGPV ESIA AP L+     A     LASG+ +AT A
Sbjct  61   HGGVGGTAVDLIVAFERLGYHGVPGPVIESIAAAPALVT---DASLLSALASGDAVATFA  117

Query  123  MPPRVPRAVDADTAGLVLLAGDGSVTEGTPGDCHRSVDPSRRLYEVAASGQAWRAPKDVV  182
              P  P A+DAD A  V + GD S+     G   +SVDPSR L+EV A  +      +  
Sbjct  118  SAPDTPYALDADVATDVFVVGD-SLARAEIGRSRQSVDPSRHLFEVTAGAEVQPLSPEKR  176

Query  183  ARAYEFGALATAAQLVGAGQALLEAAVNYAKQRTQFGRAIGSYQAIKHKLADVHIAIELA  242
            A A +  +LA AA+L+G G+ +L   V Y  QR QFGR IG YQA+KH  ADV +A++ A
Sbjct  177  AAALDLASLACAAELLGCGERMLADTVAYLGQRRQFGRVIGEYQALKHAAADVRVALDFA  236

Query  243  CPLVYGAAVSLEPRDVSAAKAAASEAALLAARWALQTHGAIGFTCEHDLSLWLLRVQALH  302
             PL+ GAA     R +SAAK A S+AA LAAR  LQ HGAIG+T E DLSLWLLRV+AL 
Sbjct  237  RPLLLGAAREPSARAISAAKVATSDAAQLAARTGLQLHGAIGYTLECDLSLWLLRVRALV  296

Query  303  SAWGTPQEHRRRVLEAL  319
              WGTP  HR RVLE+L
Sbjct  297  GCWGTPAGHRARVLESL  313


>gi|312138165|ref|YP_004005501.1| acyl-CoA dehydrogenase [Rhodococcus equi 103S]
 gi|311887504|emb|CBH46816.1| putative acyl-CoA dehydrogenase [Rhodococcus equi 103S]
Length=328

 Score =  266 bits (681),  Expect = 2e-69, Method: Compositional matrix adjust.
 Identities = 161/329 (49%), Positives = 210/329 (64%), Gaps = 13/329 (3%)

Query  3    MEFALNEQQRDFAASIDAALGAADLPGVVRAWAAGDVAPGRKVWQQLANLGVTALGVAEK  62
            M+F+L+ +QRDFA S+   L  A+ P VVR+W   D A G  + QQLA  GVTAL V E+
Sbjct  1    MKFSLSTEQRDFAESLRGLLANANTPAVVRSWGENDTAAGLALLQQLAETGVTALAVPEE  60

Query  63   FDGLGASPVDLVVALERLGRWCVPGPVTESIAVAPILLA--HDDQAERSH--GLASGELI  118
            FDG+GA P DL VA   LGR  VPGPV E+ A  P LL+  +D Q  +    G+A G L 
Sbjct  61   FDGIGAHPADLAVAFIELGRAAVPGPVLETAAAVPALLSALNDQQLAKRFLPGIAEGNL-  119

Query  119  ATVAMPPRVPRAVDADTAGLVLLAGDGSVTEGTPGDCHRSVDPSRRLYEVAA--SGQAWR  176
            A++ + P  PRA+DAD A  VL     ++    P     SVDP+RRL+EV +  +     
Sbjct  120  ASLVLEPSTPRALDADVAEPVLRVSGDTLELVRPTTQLESVDPARRLFEVESVETLAQGA  179

Query  177  APKDVVARAYEFGALATAAQLVGAGQALLEAAVNYAKQRTQFGRAIGSYQAIKHKLADVH  236
                   +AY+   LA +AQL+GAG A++E A +YAK R+QFGR IGS+QA+KH ++D  
Sbjct  180  DVAAAAEKAYDLAVLAASAQLIGAGHAMIETATDYAKNRSQFGRVIGSFQAVKHHMSDAL  239

Query  237  IAIELACPLVYGAAVSLEP------RDVSAAKAAASEAALLAARWALQTHGAIGFTCEHD  290
            +A+E+A PLVYGAA+S+        RDVSAAK AA+ AA +A+R ALQ HGAIG+T E D
Sbjct  240  VAVEMATPLVYGAAISIAEGSDTIARDVSAAKVAAANAAYVASRKALQVHGAIGYTLECD  299

Query  291  LSLWLLRVQALHSAWGTPQEHRRRVLEAL  319
            LSLWL + +AL SAWGT   HR R+  AL
Sbjct  300  LSLWLTKTRALQSAWGTASAHRARIASAL  328


>gi|325674931|ref|ZP_08154618.1| acyl-CoA dehydrogenase [Rhodococcus equi ATCC 33707]
 gi|325554517|gb|EGD24192.1| acyl-CoA dehydrogenase [Rhodococcus equi ATCC 33707]
Length=328

 Score =  263 bits (672),  Expect = 3e-68, Method: Compositional matrix adjust.
 Identities = 160/329 (49%), Positives = 209/329 (64%), Gaps = 13/329 (3%)

Query  3    MEFALNEQQRDFAASIDAALGAADLPGVVRAWAAGDVAPGRKVWQQLANLGVTALGVAEK  62
            M+F+L+ +QRDFA S+   L  A+ P VVR+W   D A G  + QQLA  GVTAL V E+
Sbjct  1    MKFSLSTEQRDFAESLRGLLANANTPAVVRSWGENDTAAGLALLQQLAETGVTALAVPEE  60

Query  63   FDGLGASPVDLVVALERLGRWCVPGPVTESIAVAPILLA--HDDQAERSH--GLASGELI  118
            FDG+GA   DL VA   LGR  VPGPV E+ A  P LL+  +D Q  +    G+A G L 
Sbjct  61   FDGIGAHQADLAVAFIELGRAAVPGPVLETAAAVPALLSALNDQQLAKRFLPGIAEGNL-  119

Query  119  ATVAMPPRVPRAVDADTAGLVLLAGDGSVTEGTPGDCHRSVDPSRRLYEVAA--SGQAWR  176
            A++ + P  PRA+DAD A  VL     ++    P     SVDP+RRL+EV +  +     
Sbjct  120  ASLVLEPSTPRALDADVAEPVLRVSGDTLELVRPTTQLESVDPARRLFEVESVETLAQGA  179

Query  177  APKDVVARAYEFGALATAAQLVGAGQALLEAAVNYAKQRTQFGRAIGSYQAIKHKLADVH  236
                   +AY+   LA +AQL+GAG A++E A +YAK R+QFGR IGS+QA+KH ++D  
Sbjct  180  DVAAAAEKAYDLAVLAASAQLIGAGHAMIETATDYAKNRSQFGRVIGSFQAVKHHMSDAL  239

Query  237  IAIELACPLVYGAAVSLEP------RDVSAAKAAASEAALLAARWALQTHGAIGFTCEHD  290
            +A+E+A PLVYGAA+S+        RDVSAAK AA+ AA +A+R ALQ HGAIG+T E D
Sbjct  240  VAVEMATPLVYGAAISIAEGSDTIARDVSAAKVAAANAAYVASRKALQVHGAIGYTLECD  299

Query  291  LSLWLLRVQALHSAWGTPQEHRRRVLEAL  319
            LSLWL + +AL SAWGT   HR R+  AL
Sbjct  300  LSLWLTKTRALQSAWGTASAHRARIASAL  328


>gi|326328931|ref|ZP_08195262.1| putative acyl-CoA dehydrogenase [Nocardioidaceae bacterium Broad-1]
 gi|325953274|gb|EGD45283.1| putative acyl-CoA dehydrogenase [Nocardioidaceae bacterium Broad-1]
Length=320

 Score =  257 bits (656),  Expect = 2e-66, Method: Compositional matrix adjust.
 Identities = 170/323 (53%), Positives = 208/323 (65%), Gaps = 13/323 (4%)

Query  3    MEFALNEQQRDFAASIDAALGAADLPGVVRAWAAGDVAPGRKVWQQLANLGVTALGVAEK  62
            M F    +Q  F+ ++D  LGAAD+    RAWAA D + G K+WQ+LA LGVT L V E+
Sbjct  1    MRFGRTPEQHAFSEALDDLLGAADVSAASRAWAARDHSAGLKLWQRLAELGVTGLLVPEE  60

Query  63   FDGLGASPVDLVVALERLGRWCVPGPVTESIAVAPILLAHDDQAERSHGLASGELIATVA  122
              GL AS VDL VA ERLG   VPGP  ES+A+AP LL     AE    LA GE  A VA
Sbjct  61   DGGLSASAVDLTVAFERLGYHGVPGPWIESVALAPRLLPGTPDAELLARLAPGE--ALVA  118

Query  123  MPPRVPRAVDADTAGLVLLAGDGSVTEGTPGDCHRSVDPSRRLYEVAASGQAWRAPKDVV  182
            + P   RA+DAD A      G  ++    PG    SVDP+RRL+EV A  +   A  D  
Sbjct  119  VAPGT-RALDADVAERTYALG-ATLRRAEPGAERTSVDPTRRLFEVTAGEEI--ATID-P  173

Query  183  ARAYEFGALATAAQLVGAGQALLEAAVNYAKQRTQFGRAIGSYQAIKHKLADVHIAIELA  242
            A A +FG LA +AQL+GAG  LL+ +V Y KQRTQFGR IG +QA+KH LADV +A++ A
Sbjct  174  APALDFGTLACSAQLLGAGLRLLDDSVAYVKQRTQFGRRIGEFQAVKHLLADVRVALDFA  233

Query  243  CPLVYGAAVSLE------PRDVSAAKAAASEAALLAARWALQTHGAIGFTCEHDLSLWLL  296
             PLV+ AAV L+       R VSAAK A  +AA LA+R ALQ HGAIG+T E DLSLW+L
Sbjct  234  APLVHNAAVELDAEAPTAARAVSAAKVATGDAAYLASRTALQVHGAIGYTREFDLSLWIL  293

Query  297  RVQALHSAWGTPQEHRRRVLEAL  319
            +V+AL  AWGTP EHR R+LE+L
Sbjct  294  KVRALVGAWGTPAEHRARILESL  316


>gi|312197062|ref|YP_004017123.1| acyl-CoA dehydrogenase domain-containing protein [Frankia sp. 
EuI1c]
 gi|311228398|gb|ADP81253.1| acyl-CoA dehydrogenase domain-containing protein [Frankia sp. 
EuI1c]
Length=328

 Score =  254 bits (649),  Expect = 1e-65, Method: Compositional matrix adjust.
 Identities = 171/326 (53%), Positives = 214/326 (66%), Gaps = 14/326 (4%)

Query  3    MEFALNEQQRDFAASIDAALGAADLPGVVRAWAAGDVAPGRKVWQQLANLGVTALGVAEK  62
            M F    +Q D+AAS+   L A D P + RAWAAGD APGR +W++LA+ GV ALG+  +
Sbjct  1    MRFQPQPEQLDYAASLRDFLAAQDTPSIARAWAAGDPAPGRALWRKLADQGVLALGLPPE  60

Query  63   FDGLGASPVDLVVALERLGRWCVPGPVTESIAVAPILLAHDDQAERSHGLASGELIATVA  122
              G+ A+PVDLV+A E+LGR  VPGP  ES+AV P+LLA    A+R   + +G L+ATVA
Sbjct  61   HGGVDATPVDLVLAFEQLGRAAVPGPYVESVAVLPMLLAGTPAADRLEPIGAGSLVATVA  120

Query  123  MPPRVPRAVDADTAGLVLLAGDGSVTEGTPGDCHRSVDPSRRLYEVAASGQAWRAPKDVV  182
            +PPRVP AVDA  A +  +   G +          SVDPSRRL  V A       P   V
Sbjct  121  LPPRVPYAVDAAAADVSFVVTAGGLAYARVTGGRDSVDPSRRLGVVEAG-----EPLGAV  175

Query  183  --ARAYEFGALATAAQLVGAGQALLEAAVNYAKQRTQFGRAIGSYQAIKHKLADVHIAIE  240
              A A++ GALATAA L+GAG ALLE  V+YAK R QFG  IGS+QA+KH+LADV +A+E
Sbjct  176  DPAAAFDRGALATAAYLLGAGAALLEQTVDYAKLRRQFGAPIGSFQAVKHQLADVAVALE  235

Query  241  LACPLVYGAAVSLE-------PRDVSAAKAAASEAALLAARWALQTHGAIGFTCEHDLSL  293
             A PL+ GAA+++         RDVSAA  A +  A LAAR ALQ HGAIG+T EH LS+
Sbjct  236  FARPLLSGAALAVAGPGGPTVGRDVSAAWVACATGAHLAARTALQVHGAIGYTAEHTLSV  295

Query  294  WLLRVQALHSAWGTPQEHRRRVLEAL  319
            WLL+V+AL SAWGT + HR RV  AL
Sbjct  296  WLLKVRALLSAWGTHRLHRGRVWAAL  321


>gi|311744281|ref|ZP_07718085.1| acyl-CoA dehydrogenase [Aeromicrobium marinum DSM 15272]
 gi|311312454|gb|EFQ82367.1| acyl-CoA dehydrogenase [Aeromicrobium marinum DSM 15272]
Length=305

 Score =  252 bits (643),  Expect = 6e-65, Method: Compositional matrix adjust.
 Identities = 155/317 (49%), Positives = 194/317 (62%), Gaps = 19/317 (5%)

Query  3    MEFALNEQQRDFAASIDAALGAADLPGVVRAWAAGDVAPGRKVWQQLANLGVTALGVAEK  62
            M F    +Q  FA S+D  L  +D     RAWA G+  PG  +W++LA+LGVT+L     
Sbjct  1    MRFTPTTEQTGFARSLDDLLTRSDTVAANRAWARGEHGPGLGLWKRLADLGVTSLATE--  58

Query  63   FDGLGASPVDLVVALERLGRWCVPGPVTESIAVAPILLAHDDQAERSHGLASGELIATVA  122
                 A+PV++ +A E LGR  VPGP  ES A  P+ L   D  +          IATVA
Sbjct  59   -----ATPVEVRIAFEALGRHAVPGPWVESAAYLPVALPDVDLTD---------TIATVA  104

Query  123  MPPRVPRAVDADTAGLVLLAGDGSVTEGTPGDCHRSVDPSRRLYEVAASGQAWRAPKDVV  182
            + P VP A+DAD A  V +   G+++  T G    SVDPSRRL EV A         D  
Sbjct  105  VLPHVPYALDADVADTVYVVTGGALSTATAGAPVTSVDPSRRLVEVVAGDPVDHGDLD--  162

Query  183  ARAYEFGALATAAQLVGAGQALLEAAVNYAKQRTQFGRAIGSYQAIKHKLADVHIAIELA  242
             RA++  A ATAAQL+GAG+ +L  +V Y  QRTQFGR IGSYQAIKH+LADV +A++ A
Sbjct  163  -RAFDLAAFATAAQLLGAGERVLADSVAYVSQRTQFGRTIGSYQAIKHQLADVRVALDFA  221

Query  243  CPLVYGAAVSLEPRDVSAAKAAASEAALLAARWALQTHGAIGFTCEHDLSLWLLRVQALH  302
             PL+ GA V L PR VSAA    ++AA LAAR  LQ HGAIG+T E+DLS WLLR++AL 
Sbjct  222  RPLLDGAGVELTPRSVSAAAIQCADAARLAARVGLQVHGAIGYTQEYDLSRWLLRIRALQ  281

Query  303  SAWGTPQEHRRRVLEAL  319
            SAWGTP  HR R+L  L
Sbjct  282  SAWGTPAWHRERLLADL  298


>gi|333918612|ref|YP_004492193.1| acyl-CoA dehydrogenase domain-containing protein [Amycolicicoccus 
subflavus DQS3-9A1]
 gi|333480833|gb|AEF39393.1| Acyl-CoA dehydrogenase domain protein [Amycolicicoccus subflavus 
DQS3-9A1]
Length=328

 Score =  251 bits (640),  Expect = 1e-64, Method: Compositional matrix adjust.
 Identities = 170/326 (53%), Positives = 212/326 (66%), Gaps = 12/326 (3%)

Query  3    MEFALNEQQRDFAASIDAALGAADLPGVVRAWAAGDVAPGRKVWQQLANLGVTALGVAEK  62
            M+F+L+ + RDFAASI   L  +D+PG +R+W+AG+  PG K+WQ LANLGV+AL V+E+
Sbjct  1    MDFSLSTEHRDFAASIGHLLQTSDVPGAIRSWSAGEHGPGLKLWQGLANLGVSALAVSEE  60

Query  63   FDGLGASPVDLVVALERLGRWCVPGPVTESIAVAPILL-AHDDQAER-SHGLASGELIAT  120
             +G GA  VDL VA E LG + VPGP+ ES A  P LL +HD  AER    +A GE +AT
Sbjct  61   HEGAGADAVDLTVAFEVLGYYAVPGPIVESFAAIPGLLRSHDALAERWLPAIARGESVAT  120

Query  121  VAMPPRVPRAVDADTAGLVLLAG-DGSVTEGTPGDCHRSVDPSRRLYEVAASGQAWRAPK  179
            +AM P  P A+DAD A L L+ G DG+V EG      RSVD +RRL+ +   GQ   A  
Sbjct  121  LAMLPHTPFALDADVADLRLVVGSDGAVIEGARSAPERSVDAARRLFRLEPHGQRAIADA  180

Query  180  DVVARAYEFGALATAAQLVGAGQALLEAAVNYAKQRTQFGRAIGSYQAIKHKLADVHIAI  239
                 A    ALA+AAQL+G GQ +L+  V YAKQR Q+G+ IG YQAIKH LAD   A+
Sbjct  181  GAAFDAA---ALASAAQLLGLGQRILDDTVAYAKQRHQYGKPIGQYQAIKHLLADCATAL  237

Query  240  ELACPLVYGAAVSLEP------RDVSAAKAAASEAALLAARWALQTHGAIGFTCEHDLSL  293
            ELA PLV+GAAV++        RDVSAA+ AA+ AA   AR  LQ HGAIG+T EHDL  
Sbjct  238  ELARPLVHGAAVAMTSGTATCARDVSAARVAAAAAAYRIARTGLQVHGAIGYTAEHDLGQ  297

Query  294  WLLRVQALHSAWGTPQEHRRRVLEAL  319
             L +V AL   WGT   HR RVL A+
Sbjct  298  QLTKVFALQCIWGTQAFHRDRVLRAV  323


>gi|54022444|ref|YP_116686.1| putative acyl-CoA dehydrogenase [Nocardia farcinica IFM 10152]
 gi|54013952|dbj|BAD55322.1| putative acyl-CoA dehydrogenase [Nocardia farcinica IFM 10152]
Length=342

 Score =  251 bits (640),  Expect = 1e-64, Method: Compositional matrix adjust.
 Identities = 170/331 (52%), Positives = 205/331 (62%), Gaps = 17/331 (5%)

Query  3    MEFALNEQQRDFAASIDAALGAADLPGVVRAWAAGDVAPGRKVWQQLANLGVTALGVAEK  62
            M FAL+ +Q DFAAS+   L A   P  VRAWAAGD  PGR +  QLA  GV  L + E 
Sbjct  1    MRFALSPEQADFAASVRKLLDAGRTPAAVRAWAAGDREPGRALLGQLAEQGVLGLAIDED  60

Query  63   FDGLGASPVDLVVALERLGRWCVPGPVTESIAVAPILLA---HDDQAER-SHGLASGELI  118
              G+GA P+DLVVA   LGR   PGP+ ES A  P LL      D A+R   G+A G  +
Sbjct  61   NGGMGAEPIDLVVAFVELGRAAAPGPLVESAAAIPALLQALPDADAAQRWLPGIAEGSAL  120

Query  119  ATVAMPPR-VPRAVDADTAGLVLLAGDGSVTEGTPGDCHRSVDPSRRLY-----EVAASG  172
            AT++        A+DA+ A +V +     VT G      RSVDP+RRL      E  A G
Sbjct  121  ATISFESAGTTVALDAEAADVVFVVSGDRVTVGRATGEVRSVDPARRLSTVEPGETVAEG  180

Query  173  QAWRAPKDVVARAYEFGALATAAQLVGAGQALLEAAVNYAKQRTQFGRAIGSYQAIKHKL  232
            +  RA    VARA++ G LA AAQ +GAG+ALL AA  YAKQR QFGR IG +QA+K KL
Sbjct  181  EPARA---AVARAFDAGVLACAAQQLGAGRALLHAATEYAKQRKQFGRPIGEFQAVKQKL  237

Query  233  ADVHIAIELACPLVYGAAVSL-EP---RDVSAAKAAASEAALLAARWALQTHGAIGFTCE  288
            ADV IA++LA PL+Y AA++  EP   RDVSAA  A  +AA  AAR ALQ HGAIG+T E
Sbjct  238  ADVLIALDLAEPLLYRAALTFDEPSRERDVSAAAVACGDAAYTAARAALQVHGAIGYTAE  297

Query  289  HDLSLWLLRVQALHSAWGTPQEHRRRVLEAL  319
            +DLSLWL +V AL SAWGT   HR R+  AL
Sbjct  298  YDLSLWLTKVTALRSAWGTADVHRGRIARAL  328


>gi|300785285|ref|YP_003765576.1| acyl-CoA dehydrogenase [Amycolatopsis mediterranei U32]
 gi|299794799|gb|ADJ45174.1| acyl-CoA dehydrogenase [Amycolatopsis mediterranei U32]
 gi|340526728|gb|AEK41933.1| acyl-CoA dehydrogenase [Amycolatopsis mediterranei S699]
Length=305

 Score =  250 bits (639),  Expect = 2e-64, Method: Compositional matrix adjust.
 Identities = 180/318 (57%), Positives = 214/318 (68%), Gaps = 16/318 (5%)

Query  3    MEFALNEQQRDFAASIDAALGAADLPGVVRAWAAGDVAPGRKVWQQLANLGVTALGVAEK  62
            M F L+ +QR FAA++   LG AD     RAWAAG+   G K+W+ LA++GV AL V E 
Sbjct  1    MRFQLSPEQRQFAATLHELLGGADTAAAARAWAAGEHDRGLKLWRALADVGVFALLVDED  60

Query  63   FDGLGASPVDLVVALERLGRWCVPGPVTESIAVAPILLAHDDQAERSHGLASGELIATVA  122
              GLGA PVDLVVA E LG   VPGP+ ES AVAP LL       R   LA G+L+ATV 
Sbjct  61   HGGLGAGPVDLVVACEALGYHAVPGPLVESAAVAPALL----TGHRLTSLAEGDLVATVV  116

Query  123  MPPRVPRAVDADTAGLVLLAGDGSVTEGTPGDCHRSVDPSRRLYEV-AASGQAWRAPKDV  181
             PP VP A+DAD AG+VL     S+T G   +  RS+DP RRL+ V AA+G++     D 
Sbjct  117  APPEVPLALDADVAGMVLDLTGASLTAGA--EPVRSIDPPRRLFRVPAAAGRS-----DG  169

Query  182  VARAYEFGALATAAQLVGAGQALLEAAVNYAKQRTQFGRAIGSYQAIKHKLADVHIAIEL  241
            V  A++ G LA AAQL+GAGQ LL+ +V YAKQR Q+GRAIG YQAIKH LADV   +EL
Sbjct  170  V--AFDRGVLAVAAQLLGAGQWLLDTSVAYAKQRKQYGRAIGEYQAIKHLLADVVTRLEL  227

Query  242  ACPLVYGAAVSLEP--RDVSAAKAAASEAALLAARWALQTHGAIGFTCEHDLSLWLLRVQ  299
            A PL+YGAAV+ E   RDVSAAK  A +AALLAAR ALQ HGAIG+T EHDL L L +V+
Sbjct  228  ARPLLYGAAVAGETFARDVSAAKVMAGDAALLAARTALQVHGAIGYTAEHDLGLRLTKVR  287

Query  300  ALHSAWGTPQEHRRRVLE  317
            AL  AWGT   HR RVL 
Sbjct  288  ALAGAWGTGSFHRARVLR  305


>gi|296141510|ref|YP_003648753.1| acyl-CoA dehydrogenase domain-containing protein [Tsukamurella 
paurometabola DSM 20162]
 gi|296029644|gb|ADG80414.1| acyl-CoA dehydrogenase domain protein [Tsukamurella paurometabola 
DSM 20162]
Length=334

 Score =  244 bits (622),  Expect = 2e-62, Method: Compositional matrix adjust.
 Identities = 166/331 (51%), Positives = 202/331 (62%), Gaps = 18/331 (5%)

Query  3    MEFALNEQQRDFAASIDAALGAADLPGVVRAWAAGDVAPGRKVWQQLANLGVTALGVAEK  62
            M FA +++   FAAS+   L  A      RAWAAGD +PGR +W  LA+LGVT L + E 
Sbjct  1    MRFAPSQENLAFAASLHDLLSGASTTAAARAWAAGDHSPGRTIWSALADLGVTGLAIDEG  60

Query  63   FDGLGASPVDLVVALERLGRWCVPGPVTESIAVAPILLAHDDQAERSHGLASGELIATVA  122
            +DG+G  P DL +ALE LG   VPGPV ESIAV P LL  +  A     LA G  I TVA
Sbjct  61   YDGVGGDPADLAIALEALGYHGVPGPVVESIAVLPALLTGEQAARHLPALAGGA-IGTVA  119

Query  123  MPPRVPRAVDADTAGL-VLLAGDGSVTEGT-PGDCH-RSVDPSRRLYEVAASGQAWRAPK  179
            + PR    +DAD + L   +A DG V E   P   H RS+DP+RRL+  +  G      +
Sbjct  120  IAPRAAHLLDADASDLRFTVAADGRVAESVAPEGAHQRSIDPTRRLFVTSEPGAGSPGDR  179

Query  180  DVVARAYEFGALATAAQLVGAGQALLEAAVNYAKQRTQFGRAIGSYQAIKHKLADVHIAI  239
            D   RA   G    AAQ +GAG+ LL+ AV YAK R Q+G  IG YQAIKH LADV   +
Sbjct  180  D---RALLLGTFGVAAQTLGAGRRLLDEAVGYAKTRAQYGHLIGEYQAIKHLLADVATRL  236

Query  240  ELACPLVYGAAVSLE-----------PRDVSAAKAAASEAALLAARWALQTHGAIGFTCE  288
            ELA PLV GAAV+L             RDVSAA+ A+++AA LAAR ALQ HGAIG+T E
Sbjct  237  ELAAPLVRGAAVALSHSGSPGVGMDAARDVSAARVASADAANLAARTALQVHGAIGYTAE  296

Query  289  HDLSLWLLRVQALHSAWGTPQEHRRRVLEAL  319
            HDL +WL +V+AL SAWGT  EHR  VL A+
Sbjct  297  HDLGIWLTKVRALRSAWGTQSEHRAVVLNAV  327


>gi|159038390|ref|YP_001537643.1| acyl-CoA dehydrogenase domain-containing protein [Salinispora 
arenicola CNS-205]
 gi|157917225|gb|ABV98652.1| acyl-CoA dehydrogenase domain protein [Salinispora arenicola 
CNS-205]
Length=335

 Score =  244 bits (622),  Expect = 2e-62, Method: Compositional matrix adjust.
 Identities = 166/329 (51%), Positives = 202/329 (62%), Gaps = 12/329 (3%)

Query  3    MEFALNEQQRDFAASIDAALGAADLPGVVRAWAAGDVAPGRKVWQQLANLGVTALGVAEK  62
            M   L+ +Q  FAA +   L  AD+P V   WAA D +PG+ VW+QLA+LGVT L V  +
Sbjct  1    MRLTLSTEQEQFAAVLHTMLTEADIPTVAHRWAADDPSPGQLVWRQLADLGVTGLAVPTR  60

Query  63   FDGLGASPVDLVVALERLGRWCVPGPVTESIAVAPILLA--HDDQAERS--HGLASGELI  118
            + GL A P D+VVA E LG   +PGPV ESIA  P LL    DD    +    LA+GEL+
Sbjct  61   WGGLAAHPADIVVACEELGHHALPGPVAESIAAIPTLLTALGDDALCETWLPRLATGELV  120

Query  119  ATVAMPPRVPRAVDADTAGLVLLAGDGSVTEGTPGDCHRSVDPSRRLYEVAASGQAWRAP  178
             T+ +PP VP A DAD A LVL AG  ++  G PG   RSVD +RRL EV         P
Sbjct  121  GTLTVPPHVPYATDADVAALVLRAGAQTLRLGVPGARLRSVDDTRRLTEVIDGALLADGP  180

Query  179  K--DVVARAYEFGALATAAQLVGAGQALLEAAVNYAKQRTQFGRAIGSYQAIKHKLADVH  236
                 VA A + GALA AAQL+GAG ALLEA+V YA QRTQFGR +G +QA+KH LADV 
Sbjct  181  AVGSAVAHALDAGALACAAQLLGAGHALLEASVRYAGQRTQFGRPVGQFQAVKHMLADVA  240

Query  237  IAIELACPLVYGAA------VSLEPRDVSAAKAAASEAALLAARWALQTHGAIGFTCEHD  290
            I +E A PL++ AA           RDVSAAK A ++AA  AAR ALQ HGAIG+  E  
Sbjct  241  IGLEFARPLLFAAAVALADQTPTAARDVSAAKVACADAARRAARTALQVHGAIGYARESG  300

Query  291  LSLWLLRVQALHSAWGTPQEHRRRVLEAL  319
            L  WL R+ AL  AWGT   HR R++ A+
Sbjct  301  LDSWLTRIWALVRAWGTQSWHRGRIMAAV  329


>gi|119716994|ref|YP_923959.1| acyl-CoA dehydrogenase domain-containing protein [Nocardioides 
sp. JS614]
 gi|119537655|gb|ABL82272.1| acyl-CoA dehydrogenase domain protein [Nocardioides sp. JS614]
Length=289

 Score =  243 bits (619),  Expect = 4e-62, Method: Compositional matrix adjust.
 Identities = 157/317 (50%), Positives = 197/317 (63%), Gaps = 30/317 (9%)

Query  3    MEFALNEQQRDFAASIDAALGAADLPGVVRAWAAGDVAPGRKVWQQLANLGVTALGVAEK  62
            M F  ++ QRD AA++++ LGAAD   V RAWA GD  PGRK+W +LA LGVT L     
Sbjct  1    MRFVPDDDQRDLAAALESLLGAADTVAVARAWADGDHDPGRKLWARLAELGVTQLATE--  58

Query  63   FDGLGASPVDLVVALERLGRWCVPGPVTESIAVAPILLAHDDQAERSHGLASGELIATVA  122
                 A+PV++ +A E LGR  VPGP  ES A  PI L  +              IATVA
Sbjct  59   -----ATPVEVCLAFEALGRHAVPGPWVESAAYLPIALGQEVDG-----------IATVA  102

Query  123  MPPRVPRAVDADTAGLVLLAGDGSVTEGTPGDCHRSVDPSRRLYEVAASGQAWRAPKDVV  182
            +PP VP A+DAD A  V +   G+    + G+   SVD +R L+ V  SG+   A     
Sbjct  103  LPPVVPYALDADIADRVYV---GTTPAESVGEEVGSVDRTRHLFPVTGSGETDEA-----  154

Query  183  ARAYEFGALATAAQLVGAGQALLEAAVNYAKQRTQFGRAIGSYQAIKHKLADVHIAIELA  242
              A+E   LATAAQL+GAG+ +L   V YAKQR QFGR IGSYQAIKH LADV IA++ A
Sbjct  155  --AFELAVLATAAQLLGAGERILADTVAYAKQRRQFGREIGSYQAIKHALADVRIALDFA  212

Query  243  CPLVYGAAVSLEPRDVSAAKAAASEAALLAARWALQTHGAIGFTCEHDLSLWLLRVQALH  302
             PLV GAA+   P   +AAK A ++AA L++R  LQ HGA+G+T E DLSLWL +V+AL 
Sbjct  213  RPLVLGAALGEVP--AAAAKVACADAAYLSSRTGLQVHGAVGYTQELDLSLWLTKVRALV  270

Query  303  SAWGTPQEHRRRVLEAL  319
            +AWGTP  HR R+LE L
Sbjct  271  TAWGTPAFHRARLLEGL  287


>gi|343925879|ref|ZP_08765394.1| putative acyl-CoA dehydrogenase [Gordonia alkanivorans NBRC 16433]
 gi|343764230|dbj|GAA12320.1| putative acyl-CoA dehydrogenase [Gordonia alkanivorans NBRC 16433]
Length=322

 Score =  241 bits (614),  Expect = 2e-61, Method: Compositional matrix adjust.
 Identities = 158/328 (49%), Positives = 207/328 (64%), Gaps = 17/328 (5%)

Query  3    MEFALNEQQRDFAASIDAALGAADLPGVVRAWAAGDVAPGRKVWQQLANLGVTALGVAEK  62
            M+F L++   D AA++DA LG AD+P   RAWAAGD     KV+ QLA+ G++ L + E 
Sbjct  1    MDFQLSDIHTDLAATVDAMLGKADMPAAARAWAAGDRTAVTKVYSQLADAGISGLLIDES  60

Query  63   FDGLGASPVDLVVALERLGRWCVPGPVTESIAVAPILLAHDDQAERSHGLASGELIATVA  122
              G  A  V+++VA+E+LGR C PGP+ ES+AV PILL   D       LA G L AT A
Sbjct  61   HGGSSAGAVEMIVAVEQLGRHCAPGPIVESVAVLPILLRDADVNGPLQDLAEGRL-ATCA  119

Query  123  MPPRVPRAVDADTAGLVLLAGDGSVTEGTPGDCHRSVDPSRRLYEVAASGQAWRA--PKD  180
            + P  P A D D+A  V +  DG ++  T      SVD +R L  VA          P D
Sbjct  120  IAPLQPLAPDVDSAD-VYVVEDGVLSTATVLSTEPSVDTTRTLSRVAPDKTLATGIDPSD  178

Query  181  VVARAYEFGALATAAQLVGAGQALLEAAVNYAKQRTQFGRAIGSYQAIKHKLADVHIAIE  240
             V    + GALATAA+L+G GQA+L  A  YA+ R QFGR IGS+QA+KH LADV IA+E
Sbjct  179  AV----DAGALATAAELLGLGQAMLALASEYAQTRKQFGRPIGSFQAVKHHLADVAIALE  234

Query  241  LACPLVYGAAVSLE---------PRDVSAAKAAASEAALLAARWALQTHGAIGFTCEHDL  291
            +A PLV+ AA+ ++          RDVSAAK AA++AA L+AR +LQ  GAIG+T EHD+
Sbjct  235  MARPLVHAAALGIDGQVPEDTNVSRDVSAAKVAAADAAHLSARRSLQVLGAIGYTAEHDI  294

Query  292  SLWLLRVQALHSAWGTPQEHRRRVLEAL  319
            SL++ + +AL SAWG+P  HRRR+LE L
Sbjct  295  SLYITKTRALLSAWGSPAVHRRRILETL  322


>gi|288922889|ref|ZP_06417052.1| acyl-CoA dehydrogenase domain protein [Frankia sp. EUN1f]
 gi|288345780|gb|EFC80146.1| acyl-CoA dehydrogenase domain protein [Frankia sp. EUN1f]
Length=364

 Score =  238 bits (607),  Expect = 8e-61, Method: Compositional matrix adjust.
 Identities = 164/355 (47%), Positives = 205/355 (58%), Gaps = 38/355 (10%)

Query  3    MEFALNEQQRDFAASIDAALGAADLPGVVRAWAAGDVAPGRKVWQQLANLGVTALGVAEK  62
            M F+L+ +QR FAA++D  L A+D+P   RAWA GD  PG  +W++LA LGVTAL V  +
Sbjct  1    MRFSLSPEQRAFAAALDDLLTASDVPAAHRAWAGGDTDPGIALWKRLAKLGVTALAVPPE  60

Query  63   FDGLGASPVDLVVALERLGRWCVPGPVTESIAVAPILLAHDDQAERSHGLASGELIATVA  122
              GLG SP+DL VA ERLG   VPGP  E++A+APILL     A     +A G    T A
Sbjct  61   HGGLGGSPLDLAVAFERLGYHAVPGPWVETVALAPILLRATADAHLLPEIADGATRVTFA  120

Query  123  MPPRVPRAVDADTAGLVLLAGDGSVTE------------------------GTPGDCHRS  158
            +PP VP AVD D      L  D  + +                        G PG+  RS
Sbjct  121  LPPTVPYAVDCDVTAHAYLVDDAHLVDDAHLVDDAHLDDRVDSVAGRALLRGQPGEALRS  180

Query  159  VDPSRRLYEVAASGQAWRAPKDVVARAYEFGALATAAQLVGAGQALLEAAVNYAKQRTQF  218
            VDP+RRL+ +          +D V    +  ALA AA LVGAG+ LL  +V Y   R QF
Sbjct  181  VDPARRLHVLTGGTPIAGLSEDTVRAGLDRAALAAAAILVGAGERLLAESVQYVGARRQF  240

Query  219  GRAIGSYQAIKHKLADVHIAIELACPLVYGAAVSL--------------EPRDVSAAKAA  264
            GRA+G YQA+KH LADV + ++ A PL++GAA+ L                RDVSAAK  
Sbjct  241  GRAVGEYQAVKHALADVRVGLDFARPLLHGAALELAADTTGAAGVGVATAARDVSAAKVL  300

Query  265  ASEAALLAARWALQTHGAIGFTCEHDLSLWLLRVQALHSAWGTPQEHRRRVLEAL  319
            AS AAL AAR ALQ HGAIG+T E DLS+W+L V+AL  AWGTP +HR RVL +L
Sbjct  301  ASTAALRAARTALQVHGAIGYTLECDLSIWILGVRALVGAWGTPADHRARVLRSL  355


>gi|319947751|ref|ZP_08021957.1| acyl-CoA dehydrogenase [Dietzia cinnamea P4]
 gi|319438601|gb|EFV93515.1| acyl-CoA dehydrogenase [Dietzia cinnamea P4]
Length=341

 Score =  234 bits (598),  Expect = 1e-59, Method: Compositional matrix adjust.
 Identities = 150/330 (46%), Positives = 201/330 (61%), Gaps = 17/330 (5%)

Query  3    MEFALNEQQRDFAASIDAALGAADLPGVVRAWAAGDVAPGRKVWQQLANLGVTALGVAEK  62
            M+FAL+ +  DFA SID+ L  +D+P V+R+WA GD APG  VW ++A  G  AL V E 
Sbjct  1    MQFALDPEIIDFAGSIDSLLAKSDMPAVIRSWADGDTAPGTAVWGRVAETGAAALLVDEA  60

Query  63   FDGLGASPVDLVVALERLGRWCVPGPVTESIAVAPIL---LAHDDQAERSHGLASGELIA  119
              G GA+ V+ V ALE LGR  VPGPV E++ VAP +   L  D  A    G  +G  +A
Sbjct  61   SGGAGATAVEAVAALEILGRHAVPGPVVETVMVAPRIAAALGGDSNAGDVAGEIAGGALA  120

Query  120  TVAMPPRVPRAVDADTAGLVLLAGDGSVTEGTPGDCHRSVDPSRRLYEVAASGQAWR-AP  178
            +VA P   P A D   A  +    D  V     G+  RSVD +R +    A  +A   + 
Sbjct  121  SVAAPGVSPFAPDPHVAQYLWAVSDDEVFTAEAGETRRSVDRARTVAAPTAGARAAAVST  180

Query  179  KDVVARAYEFGALATAAQLVGAGQALLEAAVNYAKQRTQFGRAIGSYQAIKHKLADVHIA  238
             D++      GAL TAAQL G GQA+L  +V+YAKQR Q+G+ IG YQA+KH+LA+V IA
Sbjct  181  TDLI----NHGALGTAAQLQGLGQAMLTMSVDYAKQRKQYGKLIGEYQALKHQLAEVAIA  236

Query  239  IELACPLVYGAAVSL--EPRDVSAA-------KAAASEAALLAARWALQTHGAIGFTCEH  289
            +E+A PL++  A+++   P D  AA       + A ++AA L+AR ALQ HGAIG+T EH
Sbjct  237  LEMARPLLWAGALAIAENPGDPGAAVRDVSAARVAVADAAYLSARTALQVHGAIGYTLEH  296

Query  290  DLSLWLLRVQALHSAWGTPQEHRRRVLEAL  319
            DL LWL + +AL +AWGT   HR RVL++L
Sbjct  297  DLGLWLTKTRALQTAWGTQSYHRGRVLDSL  326


>gi|262200924|ref|YP_003272132.1| acyl-CoA dehydrogenase domain-containing protein [Gordonia bronchialis 
DSM 43247]
 gi|262084271|gb|ACY20239.1| acyl-CoA dehydrogenase domain protein [Gordonia bronchialis DSM 
43247]
Length=325

 Score =  233 bits (593),  Expect = 4e-59, Method: Compositional matrix adjust.
 Identities = 152/326 (47%), Positives = 200/326 (62%), Gaps = 11/326 (3%)

Query  3    MEFALNEQQRDFAASIDAALGAADLPGVVRAWAAGDVAPGRKVWQQLANLGVTALGVAEK  62
            MEF L++   D AA+IDA LG AD+P   RAW +GD     KV+ QLA+ GV  L + E 
Sbjct  1    MEFLLSDIHDDLAATIDAMLGKADIPTAARAWTSGDRTAMAKVYAQLADAGVCGLLIDES  60

Query  63   FDGLGASPVDLVVALERLGRWCVPGPVTESIAVAPILLAHDDQAERSHGLASGELIATVA  122
              G  A  +++VVA E+LG+ CVPGP+ ESIAV P+LL   D  +R   LA G       
Sbjct  61   HGGSSAGAIEMVVAAEQLGKHCVPGPIAESIAVLPVLLRDADLTDRLSDLADGRPATCAI  120

Query  123  MPPRVPRAVDADTAGLVLLAGDGSVTEGTPGDCHRSVDPSRRLYEVAASGQAWRAPKDVV  182
             P     A        V +   G+++     D  RSVDP+R L  V A G+      D V
Sbjct  121  APLAPLAADADADDADVYVVTAGTLSVAEIVDTERSVDPTRTLTRVRA-GEPLAEGID-V  178

Query  183  ARAYEFGALATAAQLVGAGQALLEAAVNYAKQRTQFGRAIGSYQAIKHKLADVHIAIELA  242
              A + G LAT+AQL+G GQA+L  A +YA+ R QFGR IGS+QA+KH LADV IA+E+A
Sbjct  179  DDAVDAGVLATSAQLLGLGQAMLTIAADYAQARKQFGRPIGSFQAVKHHLADVAIALEMA  238

Query  243  CPLVYGAAVSLE---------PRDVSAAKAAASEAALLAARWALQTHGAIGFTCEHDLSL  293
             PLV+ AA+ ++          RDV+AAK AA++AA L+AR +LQ  GAIG+T EHDLSL
Sbjct  239  RPLVHAAALGIDGQVPEGTNVRRDVAAAKVAAADAAHLSARRSLQVLGAIGYTAEHDLSL  298

Query  294  WLLRVQALHSAWGTPQEHRRRVLEAL  319
            ++ + +AL  AWGTP  HR R+LE+L
Sbjct  299  YITKTRALIGAWGTPAVHRDRILESL  324


>gi|290961219|ref|YP_003492401.1| oxidoreductase [Streptomyces scabiei 87.22]
 gi|260650745|emb|CBG73861.1| putative oxidoreductase [Streptomyces scabiei 87.22]
Length=325

 Score =  232 bits (591),  Expect = 6e-59, Method: Compositional matrix adjust.
 Identities = 149/322 (47%), Positives = 191/322 (60%), Gaps = 9/322 (2%)

Query  3    MEFALNEQQRDFAASIDAALGAADLPGVVRAWAAGDVAPGRKVWQQLANLGVTALGVAEK  62
            M F L+ +QR FA S+DA L AAD P  VRAW  G+   GR +W ++A  GV AL   E 
Sbjct  1    MRFLLDTEQRAFARSLDAMLTAADTPKAVRAWGRGEHLAGRALWSRVAEAGVFALAAPEA  60

Query  63   FDGLGASPVDLVVALERLGRWCVPGPVTESIAVAPILLAHDDQ--AERS-HGLASGELIA  119
            ++G+G  PV+L VA   LGR  VPGP+ E++    +L    D   AER    L SG  +A
Sbjct  61   YEGVGPLPVELAVAFVELGRHAVPGPLVETVTAVVLLSGLRDPGPAERLLPALLSGTAMA  120

Query  120  TVAMPPRVPRAVDADTAGLVLLA----GDGSVTEGTPGDCHRSVDPSRRLYEVAASGQAW  175
            TVA  P    A+D D A   L      G+  +  G  G     +DP+RR   +   G   
Sbjct  121  TVAPSPEA-YALDGDAATTHLSLDPERGELRLRPGH-GPVRPCLDPARRPTPLTPGGTLL  178

Query  176  RAPKDVVARAYEFGALATAAQLVGAGQALLEAAVNYAKQRTQFGRAIGSYQAIKHKLADV  235
                 ++ARA  +  LA AAQ +G G ALL+  V Y +QRTQFG  IGS+QA+KH+LAD 
Sbjct  179  ATDPALLARALVWARLAVAAQALGVGLALLDRTVAYVRQRTQFGVPIGSFQAVKHRLADA  238

Query  236  HIAIELACPLVYGAAVSLEPRDVSAAKAAASEAALLAARWALQTHGAIGFTCEHDLSLWL  295
             +A+E A PLV+GAAV+L+P D +AAK  A EAA   AR ALQ HGAIG+T E+DLSLW 
Sbjct  239  KVALEFARPLVFGAAVTLDPADAAAAKVTACEAAYTTARTALQLHGAIGYTAEYDLSLWF  298

Query  296  LRVQALHSAWGTPQEHRRRVLE  317
             R +AL +AWGTP   R  VL+
Sbjct  299  TRARALRTAWGTPAACRATVLD  320


>gi|145595143|ref|YP_001159440.1| acyl-CoA dehydrogenase domain-containing protein [Salinispora 
tropica CNB-440]
 gi|145304480|gb|ABP55062.1| acyl-CoA dehydrogenase domain protein [Salinispora tropica CNB-440]
Length=335

 Score =  230 bits (586),  Expect = 2e-58, Method: Compositional matrix adjust.
 Identities = 165/329 (51%), Positives = 200/329 (61%), Gaps = 12/329 (3%)

Query  3    MEFALNEQQRDFAASIDAALGAADLPGVVRAWAAGDVAPGRKVWQQLANLGVTALGVAEK  62
            M+   + +Q  FAA++ A L  AD+P V R WAA + APG+ VW++LA LGVT L V  +
Sbjct  1    MKLTPSAEQDQFAAALHAMLTEADIPTVARQWAADNPAPGQVVWRRLAELGVTGLAVPAR  60

Query  63   FDGLGASPVDLVVALERLGRWCVPGPVTESIAVAPILLAH--DDQAERS--HGLASGELI  118
            + GL A P D+VVA E LG   +PGP  ESIA  P+LL    DD    S    LASGE+I
Sbjct  61   WGGLAAHPADVVVACEVLGHHALPGPAAESIAALPMLLTTLGDDALCESWLPRLASGEVI  120

Query  119  ATVAMPPRVPRAVDADTAGLVLLAGDGSVTEGTPGDCHRSVDPSRRLYEVAASGQAWRAP  178
             T+A+ P VP A DAD   LVL A + ++  G PG   RSVD +RRL EVA        P
Sbjct  121  GTLAVAPHVPYATDADVVSLVLRADEQTLRLGAPGPRLRSVDDTRRLVEVADGALLATGP  180

Query  179  K--DVVARAYEFGALATAAQLVGAGQALLEAAVNYAKQRTQFGRAIGSYQAIKHKLADVH  236
                 VA A   GALA AAQL+GAG ALLE  + YA QRTQF + IG +QA+KH LADV 
Sbjct  181  AVGPAVAHALNAGALACAAQLLGAGHALLETTLRYAGQRTQFDQPIGQFQAVKHLLADVA  240

Query  237  IAIELACPLVYGAAV------SLEPRDVSAAKAAASEAALLAARWALQTHGAIGFTCEHD  290
            I +E A PL+Y AAV      S   RD+SAAK A ++AA  AAR ALQ HGAIG+  E  
Sbjct  241  IGLEFARPLLYAAAVALADHPSTAARDISAAKVACADAAQRAARTALQVHGAIGYARESG  300

Query  291  LSLWLLRVQALHSAWGTPQEHRRRVLEAL  319
            L  WL +V AL   WGT   HR R+  AL
Sbjct  301  LGSWLTKVWALARTWGTQSFHRDRIRTAL  329


>gi|29832737|ref|NP_827371.1| acyl-CoA dehydrogenase [Streptomyces avermitilis MA-4680]
 gi|29609857|dbj|BAC73906.1| putative acyl-CoA dehydrogenase [Streptomyces avermitilis MA-4680]
Length=319

 Score =  228 bits (582),  Expect = 8e-58, Method: Compositional matrix adjust.
 Identities = 154/321 (48%), Positives = 196/321 (62%), Gaps = 16/321 (4%)

Query  3    MEFALNEQQRDFAASIDAALGAADLPGVVRAWAAGDVAPGRKVWQQLANLGVTALGVAEK  62
            M F L+ QQRDFA S+DA L AAD P V+R    GD    R +W ++A  GV A  V E 
Sbjct  1    MRFLLSPQQRDFARSLDAMLTAADTPSVIR----GDHTARRALWSRIAEAGVFAPAVPEA  56

Query  63   FDGLGASPVDLVVALERLGRWCVPGPVTESIAVAPILLAHDDQAERSH---GLASGELIA  119
            ++G+G  PVDL VA   LGR  VPGPV E++  A +L A  +         GLA+GE +A
Sbjct  57   YEGMGPLPVDLAVAFVELGRHAVPGPVVETVLAAALLAALPEPGPAKRLLPGLAAGETVA  116

Query  120  TVAMPPRVPRAVDADTAGLVLLAGDGSVTEGTPG--DCHRSVDPSRRLYEVAASGQAWRA  177
            TV      P A+D D A +VL    G +    PG  D   S+DP RR+      G+  R 
Sbjct  117  TVG----APYALDGDAADVVLAVRGGELWLA-PGVADVRPSLDPGRRITTPLPGGE--RI  169

Query  178  PKDVVARAYEFGALATAAQLVGAGQALLEAAVNYAKQRTQFGRAIGSYQAIKHKLADVHI  237
               V   A+++  LATAAQ +G G ALL+  V +  +R QFG   GS+QA+KH+LAD   
Sbjct  170  SSRVPGHAFDWARLATAAQALGVGLALLDRTVTHVTRRVQFGVPTGSFQAVKHRLADAKT  229

Query  238  AIELACPLVYGAAVSLEPRDVSAAKAAASEAALLAARWALQTHGAIGFTCEHDLSLWLLR  297
            A+E A PL++GAAV+L PRDV+AAKAAA EAA   AR ALQ HGAIG+T E+DLSLWL +
Sbjct  230  ALEFARPLLFGAAVTLAPRDVAAAKAAACEAAYATARTALQLHGAIGYTAEYDLSLWLTK  289

Query  298  VQALHSAWGTPQEHRRRVLEA  318
             +AL +AWG+P E R  VL A
Sbjct  290  ARALRTAWGSPAECRADVLSA  310


>gi|307086357|ref|ZP_07495470.1| putative acyl-CoA dehydrogenase, C- domain protein [Mycobacterium 
tuberculosis SUMu012]
 gi|308364180|gb|EFP53031.1| putative acyl-CoA dehydrogenase, C- domain protein [Mycobacterium 
tuberculosis SUMu012]
Length=110

 Score =  223 bits (569),  Expect = 2e-56, Method: Compositional matrix adjust.
 Identities = 110/110 (100%), Positives = 110/110 (100%), Gaps = 0/110 (0%)

Query  210  NYAKQRTQFGRAIGSYQAIKHKLADVHIAIELACPLVYGAAVSLEPRDVSAAKAAASEAA  269
            NYAKQRTQFGRAIGSYQAIKHKLADVHIAIELACPLVYGAAVSLEPRDVSAAKAAASEAA
Sbjct  1    NYAKQRTQFGRAIGSYQAIKHKLADVHIAIELACPLVYGAAVSLEPRDVSAAKAAASEAA  60

Query  270  LLAARWALQTHGAIGFTCEHDLSLWLLRVQALHSAWGTPQEHRRRVLEAL  319
            LLAARWALQTHGAIGFTCEHDLSLWLLRVQALHSAWGTPQEHRRRVLEAL
Sbjct  61   LLAARWALQTHGAIGFTCEHDLSLWLLRVQALHSAWGTPQEHRRRVLEAL  110



Lambda     K      H
   0.319    0.132    0.395 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 558531753480


  Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
    Posted date:  Sep 5, 2011  4:36 AM
  Number of letters in database: 5,219,829,388
  Number of sequences in database:  15,229,318



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40