BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv3563
Length=319
Score E
Sequences producing significant alignments: (Bits) Value
gi|15610699|ref|NP_218080.1| acyl-CoA dehydrogenase FADE32 [Myco... 629 2e-178
gi|15843175|ref|NP_338212.1| acyl-CoA dehydrogenase, putative [M... 626 1e-177
gi|289555827|ref|ZP_06445037.1| acyl-CoA dehydrogenase fadE31 [M... 626 1e-177
gi|306801190|ref|ZP_07437858.1| acyl-CoA dehydrogenase fadE32 [M... 626 1e-177
gi|289440992|ref|ZP_06430736.1| acyl-CoA dehydrogenase fadE32 [M... 625 2e-177
gi|340628527|ref|YP_004746979.1| putative acyl-CoA dehydrogenase... 625 3e-177
gi|31794739|ref|NP_857232.1| acyl-CoA dehydrogenase FADE32 [Myco... 624 8e-177
gi|289572215|ref|ZP_06452442.1| acyl-CoA dehydrogenase fadE32 [M... 622 2e-176
gi|298527041|ref|ZP_07014450.1| acyl-CoA dehydrogenase FadE32 [M... 622 2e-176
gi|339299983|gb|AEJ52093.1| acyl-CoA dehydrogenase fadE31 [Mycob... 622 3e-176
gi|289752276|ref|ZP_06511654.1| acyl-CoA dehydrogenase fadE32 [M... 527 7e-148
gi|240169778|ref|ZP_04748437.1| acyl-CoA dehydrogenase FadE32 [M... 493 2e-137
gi|296166608|ref|ZP_06849037.1| acyl-CoA dehydrogenase FadE32 [M... 469 2e-130
gi|254822645|ref|ZP_05227646.1| putative acyl-CoA dehydrogenase ... 465 5e-129
gi|342862392|ref|ZP_08719032.1| FadE32 [Mycobacterium colombiens... 464 1e-128
gi|118462358|ref|YP_879878.1| acyl-CoA dehydrogenase [Mycobacter... 443 2e-122
gi|41406602|ref|NP_959438.1| FadE32 [Mycobacterium avium subsp. ... 443 2e-122
gi|118619308|ref|YP_907640.1| acyl-CoA dehydrogenase FadE32 [Myc... 436 3e-120
gi|183985020|ref|YP_001853311.1| acyl-CoA dehydrogenase FadE32 [... 434 7e-120
gi|126437645|ref|YP_001073336.1| acyl-CoA dehydrogenase domain-c... 417 1e-114
gi|108801659|ref|YP_641856.1| acyl-CoA dehydrogenase-like protei... 415 5e-114
gi|118468829|ref|YP_890239.1| acyl-CoA dehydrogenase [Mycobacter... 411 7e-113
gi|120406236|ref|YP_956065.1| acyl-CoA dehydrogenase domain-cont... 405 4e-111
gi|145222070|ref|YP_001132748.1| acyl-CoA dehydrogenase domain-c... 401 7e-110
gi|169627697|ref|YP_001701346.1| acyl-CoA dehydrogenase FadE [My... 357 2e-96
gi|226304376|ref|YP_002764334.1| acyl-CoA dehydrogenase [Rhodoco... 340 2e-91
gi|229494542|ref|ZP_04388305.1| Acyl-CoA dehydrogenase domain pr... 338 6e-91
gi|333992359|ref|YP_004524973.1| acyl-CoA dehydrogenase [Mycobac... 336 2e-90
gi|226363947|ref|YP_002781729.1| acyl-CoA dehydrogenase [Rhodoco... 318 8e-85
gi|111021564|ref|YP_704536.1| acyl-CoA dehydrogenase [Rhodococcu... 318 1e-84
gi|302528337|ref|ZP_07280679.1| acyl-CoA dehydrogenase domain-co... 280 2e-73
gi|312138165|ref|YP_004005501.1| acyl-CoA dehydrogenase [Rhodoco... 266 2e-69
gi|325674931|ref|ZP_08154618.1| acyl-CoA dehydrogenase [Rhodococ... 263 3e-68
gi|326328931|ref|ZP_08195262.1| putative acyl-CoA dehydrogenase ... 257 2e-66
gi|312197062|ref|YP_004017123.1| acyl-CoA dehydrogenase domain-c... 254 1e-65
gi|311744281|ref|ZP_07718085.1| acyl-CoA dehydrogenase [Aeromicr... 252 6e-65
gi|333918612|ref|YP_004492193.1| acyl-CoA dehydrogenase domain-c... 251 1e-64
gi|54022444|ref|YP_116686.1| putative acyl-CoA dehydrogenase [No... 251 1e-64
gi|300785285|ref|YP_003765576.1| acyl-CoA dehydrogenase [Amycola... 250 2e-64
gi|296141510|ref|YP_003648753.1| acyl-CoA dehydrogenase domain-c... 244 2e-62
gi|159038390|ref|YP_001537643.1| acyl-CoA dehydrogenase domain-c... 244 2e-62
gi|119716994|ref|YP_923959.1| acyl-CoA dehydrogenase domain-cont... 243 4e-62
gi|343925879|ref|ZP_08765394.1| putative acyl-CoA dehydrogenase ... 241 2e-61
gi|288922889|ref|ZP_06417052.1| acyl-CoA dehydrogenase domain pr... 238 8e-61
gi|319947751|ref|ZP_08021957.1| acyl-CoA dehydrogenase [Dietzia ... 234 1e-59
gi|262200924|ref|YP_003272132.1| acyl-CoA dehydrogenase domain-c... 233 4e-59
gi|290961219|ref|YP_003492401.1| oxidoreductase [Streptomyces sc... 232 6e-59
gi|145595143|ref|YP_001159440.1| acyl-CoA dehydrogenase domain-c... 230 2e-58
gi|29832737|ref|NP_827371.1| acyl-CoA dehydrogenase [Streptomyce... 228 8e-58
gi|307086357|ref|ZP_07495470.1| putative acyl-CoA dehydrogenase,... 223 2e-56
>gi|15610699|ref|NP_218080.1| acyl-CoA dehydrogenase FADE32 [Mycobacterium tuberculosis H37Rv]
gi|148663426|ref|YP_001284949.1| acyl-CoA dehydrogenase FadE32 [Mycobacterium tuberculosis H37Ra]
gi|148824769|ref|YP_001289523.1| acyl-CoA dehydrogenase fadE32 [Mycobacterium tuberculosis F11]
20 more sequence titles
Length=319
Score = 629 bits (1622), Expect = 2e-178, Method: Compositional matrix adjust.
Identities = 318/319 (99%), Positives = 319/319 (100%), Gaps = 0/319 (0%)
Query 1 VTMEFALNEQQRDFAASIDAALGAADLPGVVRAWAAGDVAPGRKVWQQLANLGVTALGVA 60
+TMEFALNEQQRDFAASIDAALGAADLPGVVRAWAAGDVAPGRKVWQQLANLGVTALGVA
Sbjct 1 MTMEFALNEQQRDFAASIDAALGAADLPGVVRAWAAGDVAPGRKVWQQLANLGVTALGVA 60
Query 61 EKFDGLGASPVDLVVALERLGRWCVPGPVTESIAVAPILLAHDDQAERSHGLASGELIAT 120
EKFDGLGASPVDLVVALERLGRWCVPGPVTESIAVAPILLAHDDQAERSHGLASGELIAT
Sbjct 61 EKFDGLGASPVDLVVALERLGRWCVPGPVTESIAVAPILLAHDDQAERSHGLASGELIAT 120
Query 121 VAMPPRVPRAVDADTAGLVLLAGDGSVTEGTPGDCHRSVDPSRRLYEVAASGQAWRAPKD 180
VAMPPRVPRAVDADTAGLVLLAGDGSVTEGTPGDCHRSVDPSRRLYEVAASGQAWRAPKD
Sbjct 121 VAMPPRVPRAVDADTAGLVLLAGDGSVTEGTPGDCHRSVDPSRRLYEVAASGQAWRAPKD 180
Query 181 VVARAYEFGALATAAQLVGAGQALLEAAVNYAKQRTQFGRAIGSYQAIKHKLADVHIAIE 240
VVARAYEFGALATAAQLVGAGQALLEAAVNYAKQRTQFGRAIGSYQAIKHKLADVHIAIE
Sbjct 181 VVARAYEFGALATAAQLVGAGQALLEAAVNYAKQRTQFGRAIGSYQAIKHKLADVHIAIE 240
Query 241 LACPLVYGAAVSLEPRDVSAAKAAASEAALLAARWALQTHGAIGFTCEHDLSLWLLRVQA 300
LACPLVYGAAVSLEPRDVSAAKAAASEAALLAARWALQTHGAIGFTCEHDLSLWLLRVQA
Sbjct 241 LACPLVYGAAVSLEPRDVSAAKAAASEAALLAARWALQTHGAIGFTCEHDLSLWLLRVQA 300
Query 301 LHSAWGTPQEHRRRVLEAL 319
LHSAWGTPQEHRRRVLEAL
Sbjct 301 LHSAWGTPQEHRRRVLEAL 319
>gi|15843175|ref|NP_338212.1| acyl-CoA dehydrogenase, putative [Mycobacterium tuberculosis
CDC1551]
gi|308232500|ref|ZP_07664099.1| acyl-CoA dehydrogenase fadE32 [Mycobacterium tuberculosis SUMu001]
gi|308369161|ref|ZP_07666669.1| acyl-CoA dehydrogenase fadE32 [Mycobacterium tuberculosis SUMu002]
16 more sequence titles
Length=317
Score = 626 bits (1615), Expect = 1e-177, Method: Compositional matrix adjust.
Identities = 317/317 (100%), Positives = 317/317 (100%), Gaps = 0/317 (0%)
Query 3 MEFALNEQQRDFAASIDAALGAADLPGVVRAWAAGDVAPGRKVWQQLANLGVTALGVAEK 62
MEFALNEQQRDFAASIDAALGAADLPGVVRAWAAGDVAPGRKVWQQLANLGVTALGVAEK
Sbjct 1 MEFALNEQQRDFAASIDAALGAADLPGVVRAWAAGDVAPGRKVWQQLANLGVTALGVAEK 60
Query 63 FDGLGASPVDLVVALERLGRWCVPGPVTESIAVAPILLAHDDQAERSHGLASGELIATVA 122
FDGLGASPVDLVVALERLGRWCVPGPVTESIAVAPILLAHDDQAERSHGLASGELIATVA
Sbjct 61 FDGLGASPVDLVVALERLGRWCVPGPVTESIAVAPILLAHDDQAERSHGLASGELIATVA 120
Query 123 MPPRVPRAVDADTAGLVLLAGDGSVTEGTPGDCHRSVDPSRRLYEVAASGQAWRAPKDVV 182
MPPRVPRAVDADTAGLVLLAGDGSVTEGTPGDCHRSVDPSRRLYEVAASGQAWRAPKDVV
Sbjct 121 MPPRVPRAVDADTAGLVLLAGDGSVTEGTPGDCHRSVDPSRRLYEVAASGQAWRAPKDVV 180
Query 183 ARAYEFGALATAAQLVGAGQALLEAAVNYAKQRTQFGRAIGSYQAIKHKLADVHIAIELA 242
ARAYEFGALATAAQLVGAGQALLEAAVNYAKQRTQFGRAIGSYQAIKHKLADVHIAIELA
Sbjct 181 ARAYEFGALATAAQLVGAGQALLEAAVNYAKQRTQFGRAIGSYQAIKHKLADVHIAIELA 240
Query 243 CPLVYGAAVSLEPRDVSAAKAAASEAALLAARWALQTHGAIGFTCEHDLSLWLLRVQALH 302
CPLVYGAAVSLEPRDVSAAKAAASEAALLAARWALQTHGAIGFTCEHDLSLWLLRVQALH
Sbjct 241 CPLVYGAAVSLEPRDVSAAKAAASEAALLAARWALQTHGAIGFTCEHDLSLWLLRVQALH 300
Query 303 SAWGTPQEHRRRVLEAL 319
SAWGTPQEHRRRVLEAL
Sbjct 301 SAWGTPQEHRRRVLEAL 317
>gi|289555827|ref|ZP_06445037.1| acyl-CoA dehydrogenase fadE31 [Mycobacterium tuberculosis KZN
605]
gi|289440459|gb|EFD22952.1| acyl-CoA dehydrogenase fadE31 [Mycobacterium tuberculosis KZN
605]
Length=696
Score = 626 bits (1615), Expect = 1e-177, Method: Compositional matrix adjust.
Identities = 319/319 (100%), Positives = 319/319 (100%), Gaps = 0/319 (0%)
Query 1 VTMEFALNEQQRDFAASIDAALGAADLPGVVRAWAAGDVAPGRKVWQQLANLGVTALGVA 60
VTMEFALNEQQRDFAASIDAALGAADLPGVVRAWAAGDVAPGRKVWQQLANLGVTALGVA
Sbjct 378 VTMEFALNEQQRDFAASIDAALGAADLPGVVRAWAAGDVAPGRKVWQQLANLGVTALGVA 437
Query 61 EKFDGLGASPVDLVVALERLGRWCVPGPVTESIAVAPILLAHDDQAERSHGLASGELIAT 120
EKFDGLGASPVDLVVALERLGRWCVPGPVTESIAVAPILLAHDDQAERSHGLASGELIAT
Sbjct 438 EKFDGLGASPVDLVVALERLGRWCVPGPVTESIAVAPILLAHDDQAERSHGLASGELIAT 497
Query 121 VAMPPRVPRAVDADTAGLVLLAGDGSVTEGTPGDCHRSVDPSRRLYEVAASGQAWRAPKD 180
VAMPPRVPRAVDADTAGLVLLAGDGSVTEGTPGDCHRSVDPSRRLYEVAASGQAWRAPKD
Sbjct 498 VAMPPRVPRAVDADTAGLVLLAGDGSVTEGTPGDCHRSVDPSRRLYEVAASGQAWRAPKD 557
Query 181 VVARAYEFGALATAAQLVGAGQALLEAAVNYAKQRTQFGRAIGSYQAIKHKLADVHIAIE 240
VVARAYEFGALATAAQLVGAGQALLEAAVNYAKQRTQFGRAIGSYQAIKHKLADVHIAIE
Sbjct 558 VVARAYEFGALATAAQLVGAGQALLEAAVNYAKQRTQFGRAIGSYQAIKHKLADVHIAIE 617
Query 241 LACPLVYGAAVSLEPRDVSAAKAAASEAALLAARWALQTHGAIGFTCEHDLSLWLLRVQA 300
LACPLVYGAAVSLEPRDVSAAKAAASEAALLAARWALQTHGAIGFTCEHDLSLWLLRVQA
Sbjct 618 LACPLVYGAAVSLEPRDVSAAKAAASEAALLAARWALQTHGAIGFTCEHDLSLWLLRVQA 677
Query 301 LHSAWGTPQEHRRRVLEAL 319
LHSAWGTPQEHRRRVLEAL
Sbjct 678 LHSAWGTPQEHRRRVLEAL 696
>gi|306801190|ref|ZP_07437858.1| acyl-CoA dehydrogenase fadE32 [Mycobacterium tuberculosis SUMu008]
gi|308352001|gb|EFP40852.1| acyl-CoA dehydrogenase fadE32 [Mycobacterium tuberculosis SUMu008]
Length=319
Score = 626 bits (1615), Expect = 1e-177, Method: Compositional matrix adjust.
Identities = 317/319 (99%), Positives = 318/319 (99%), Gaps = 0/319 (0%)
Query 1 VTMEFALNEQQRDFAASIDAALGAADLPGVVRAWAAGDVAPGRKVWQQLANLGVTALGVA 60
+TMEFALNEQQRDFAASIDAALGAADLPGVVRAWAAGDVAPGRKVWQQLANLGVTALGVA
Sbjct 1 MTMEFALNEQQRDFAASIDAALGAADLPGVVRAWAAGDVAPGRKVWQQLANLGVTALGVA 60
Query 61 EKFDGLGASPVDLVVALERLGRWCVPGPVTESIAVAPILLAHDDQAERSHGLASGELIAT 120
EKFDGLGASPVDLVVALERLGRWCVPGPVTESIAVAPILLAHDDQAERSHGLASGELIAT
Sbjct 61 EKFDGLGASPVDLVVALERLGRWCVPGPVTESIAVAPILLAHDDQAERSHGLASGELIAT 120
Query 121 VAMPPRVPRAVDADTAGLVLLAGDGSVTEGTPGDCHRSVDPSRRLYEVAASGQAWRAPKD 180
VAMPPRV RAVDADTAGLVLLAGDGSVTEGTPGDCHRSVDPSRRLYEVAASGQAWRAPKD
Sbjct 121 VAMPPRVLRAVDADTAGLVLLAGDGSVTEGTPGDCHRSVDPSRRLYEVAASGQAWRAPKD 180
Query 181 VVARAYEFGALATAAQLVGAGQALLEAAVNYAKQRTQFGRAIGSYQAIKHKLADVHIAIE 240
VVARAYEFGALATAAQLVGAGQALLEAAVNYAKQRTQFGRAIGSYQAIKHKLADVHIAIE
Sbjct 181 VVARAYEFGALATAAQLVGAGQALLEAAVNYAKQRTQFGRAIGSYQAIKHKLADVHIAIE 240
Query 241 LACPLVYGAAVSLEPRDVSAAKAAASEAALLAARWALQTHGAIGFTCEHDLSLWLLRVQA 300
LACPLVYGAAVSLEPRDVSAAKAAASEAALLAARWALQTHGAIGFTCEHDLSLWLLRVQA
Sbjct 241 LACPLVYGAAVSLEPRDVSAAKAAASEAALLAARWALQTHGAIGFTCEHDLSLWLLRVQA 300
Query 301 LHSAWGTPQEHRRRVLEAL 319
LHSAWGTPQEHRRRVLEAL
Sbjct 301 LHSAWGTPQEHRRRVLEAL 319
>gi|289440992|ref|ZP_06430736.1| acyl-CoA dehydrogenase fadE32 [Mycobacterium tuberculosis T46]
gi|289445155|ref|ZP_06434899.1| acyl-CoA dehydrogenase fadE32 [Mycobacterium tuberculosis CPHL_A]
gi|289571805|ref|ZP_06452032.1| acyl-CoA dehydrogenase fadE32 [Mycobacterium tuberculosis T17]
11 more sequence titles
Length=319
Score = 625 bits (1613), Expect = 2e-177, Method: Compositional matrix adjust.
Identities = 317/319 (99%), Positives = 318/319 (99%), Gaps = 0/319 (0%)
Query 1 VTMEFALNEQQRDFAASIDAALGAADLPGVVRAWAAGDVAPGRKVWQQLANLGVTALGVA 60
+TMEFALNEQQRDFAASIDAALGAADLPGVVRAWAAGDVAPGRKVWQQLANLGVTALGVA
Sbjct 1 MTMEFALNEQQRDFAASIDAALGAADLPGVVRAWAAGDVAPGRKVWQQLANLGVTALGVA 60
Query 61 EKFDGLGASPVDLVVALERLGRWCVPGPVTESIAVAPILLAHDDQAERSHGLASGELIAT 120
EKFDGLGASPVDLVVALERLGRWCVPGPVTESIAVAPILLAHDDQAERSHGLASGELIAT
Sbjct 61 EKFDGLGASPVDLVVALERLGRWCVPGPVTESIAVAPILLAHDDQAERSHGLASGELIAT 120
Query 121 VAMPPRVPRAVDADTAGLVLLAGDGSVTEGTPGDCHRSVDPSRRLYEVAASGQAWRAPKD 180
VAMPPRVPRAVDADTAGLVLLAGDGSVTEGTPGDCHRSVDPSRRLYEVAASGQAWRAPKD
Sbjct 121 VAMPPRVPRAVDADTAGLVLLAGDGSVTEGTPGDCHRSVDPSRRLYEVAASGQAWRAPKD 180
Query 181 VVARAYEFGALATAAQLVGAGQALLEAAVNYAKQRTQFGRAIGSYQAIKHKLADVHIAIE 240
VVARAYEFGALATAAQLVGAGQALLEAAVNYAKQRTQFGRAIGSYQAIKHKLADVHIAIE
Sbjct 181 VVARAYEFGALATAAQLVGAGQALLEAAVNYAKQRTQFGRAIGSYQAIKHKLADVHIAIE 240
Query 241 LACPLVYGAAVSLEPRDVSAAKAAASEAALLAARWALQTHGAIGFTCEHDLSLWLLRVQA 300
LACPLVYGAAVSLEPRDVSAAKAAASEAALLAAR ALQTHGAIGFTCEHDLSLWLLRVQA
Sbjct 241 LACPLVYGAAVSLEPRDVSAAKAAASEAALLAARSALQTHGAIGFTCEHDLSLWLLRVQA 300
Query 301 LHSAWGTPQEHRRRVLEAL 319
LHSAWGTPQEHRRRVLEAL
Sbjct 301 LHSAWGTPQEHRRRVLEAL 319
>gi|340628527|ref|YP_004746979.1| putative acyl-CoA dehydrogenase FADE32 [Mycobacterium canettii
CIPT 140010059]
gi|340006717|emb|CCC45905.1| putative acyl-CoA dehydrogenase FADE32 [Mycobacterium canettii
CIPT 140010059]
Length=319
Score = 625 bits (1611), Expect = 3e-177, Method: Compositional matrix adjust.
Identities = 316/319 (99%), Positives = 318/319 (99%), Gaps = 0/319 (0%)
Query 1 VTMEFALNEQQRDFAASIDAALGAADLPGVVRAWAAGDVAPGRKVWQQLANLGVTALGVA 60
+TMEFALNEQQRDFAASIDAALGAADLPGVVRAWAAGDVAPGRKVWQQLANLGVTALGVA
Sbjct 1 MTMEFALNEQQRDFAASIDAALGAADLPGVVRAWAAGDVAPGRKVWQQLANLGVTALGVA 60
Query 61 EKFDGLGASPVDLVVALERLGRWCVPGPVTESIAVAPILLAHDDQAERSHGLASGELIAT 120
EKFDGLGASPVDLVVALERLGRWCVPGPVTESIAVAPILLAHDDQAERSHGLASGELIAT
Sbjct 61 EKFDGLGASPVDLVVALERLGRWCVPGPVTESIAVAPILLAHDDQAERSHGLASGELIAT 120
Query 121 VAMPPRVPRAVDADTAGLVLLAGDGSVTEGTPGDCHRSVDPSRRLYEVAASGQAWRAPKD 180
VAMPPRVPRAVDADTAGLVLLAGDGSVTEGTPGDCHRSVDPSRRLYEVAASGQAWRAPKD
Sbjct 121 VAMPPRVPRAVDADTAGLVLLAGDGSVTEGTPGDCHRSVDPSRRLYEVAASGQAWRAPKD 180
Query 181 VVARAYEFGALATAAQLVGAGQALLEAAVNYAKQRTQFGRAIGSYQAIKHKLADVHIAIE 240
VVARAYEFGALATAAQLVGAGQALLEAAVNYAKQRTQFGRAIGSYQAIKHKLADVHIA+E
Sbjct 181 VVARAYEFGALATAAQLVGAGQALLEAAVNYAKQRTQFGRAIGSYQAIKHKLADVHIAVE 240
Query 241 LACPLVYGAAVSLEPRDVSAAKAAASEAALLAARWALQTHGAIGFTCEHDLSLWLLRVQA 300
LACPLVYGAAVSLEPRDVSAAKAAASEAALLAAR ALQTHGAIGFTCEHDLSLWLLRVQA
Sbjct 241 LACPLVYGAAVSLEPRDVSAAKAAASEAALLAARSALQTHGAIGFTCEHDLSLWLLRVQA 300
Query 301 LHSAWGTPQEHRRRVLEAL 319
LHSAWGTPQEHRRRVLEAL
Sbjct 301 LHSAWGTPQEHRRRVLEAL 319
>gi|31794739|ref|NP_857232.1| acyl-CoA dehydrogenase FADE32 [Mycobacterium bovis AF2122/97]
gi|121639482|ref|YP_979706.1| putative acyl-CoA dehydrogenase fadE32 [Mycobacterium bovis BCG
str. Pasteur 1173P2]
gi|224991979|ref|YP_002646668.1| putative acyl-CoA dehydrogenase [Mycobacterium bovis BCG str.
Tokyo 172]
gi|31620336|emb|CAD95779.1| PROBABLE ACYL-COA DEHYDROGENASE FADE32 [Mycobacterium bovis AF2122/97]
gi|121495130|emb|CAL73616.1| Probable acyl-CoA dehydrogenase fadE32 [Mycobacterium bovis BCG
str. Pasteur 1173P2]
gi|224775094|dbj|BAH27900.1| putative acyl-CoA dehydrogenase [Mycobacterium bovis BCG str.
Tokyo 172]
gi|341603503|emb|CCC66184.1| probable acyl-CoA dehydrogenase fadE32 [Mycobacterium bovis BCG
str. Moreau RDJ]
Length=319
Score = 624 bits (1608), Expect = 8e-177, Method: Compositional matrix adjust.
Identities = 316/319 (99%), Positives = 318/319 (99%), Gaps = 0/319 (0%)
Query 1 VTMEFALNEQQRDFAASIDAALGAADLPGVVRAWAAGDVAPGRKVWQQLANLGVTALGVA 60
+TMEFALNEQQRDFAASIDAALGAADLPGVVRAWAAGDVAPGRKVWQQLANLGVTALGVA
Sbjct 1 MTMEFALNEQQRDFAASIDAALGAADLPGVVRAWAAGDVAPGRKVWQQLANLGVTALGVA 60
Query 61 EKFDGLGASPVDLVVALERLGRWCVPGPVTESIAVAPILLAHDDQAERSHGLASGELIAT 120
EKFDGLGASPVDLVVALERLGRWCVPGPVTESIAVAPILLAHDD+AERSHGLASGELIAT
Sbjct 61 EKFDGLGASPVDLVVALERLGRWCVPGPVTESIAVAPILLAHDDRAERSHGLASGELIAT 120
Query 121 VAMPPRVPRAVDADTAGLVLLAGDGSVTEGTPGDCHRSVDPSRRLYEVAASGQAWRAPKD 180
VAMPPRVPRAVDADTAGLVLLAGDGSVTEGTPGDCHRSVDPSRRLYEVAASGQAWRAPKD
Sbjct 121 VAMPPRVPRAVDADTAGLVLLAGDGSVTEGTPGDCHRSVDPSRRLYEVAASGQAWRAPKD 180
Query 181 VVARAYEFGALATAAQLVGAGQALLEAAVNYAKQRTQFGRAIGSYQAIKHKLADVHIAIE 240
VVARAYEFGALATAAQLVGAGQALLEAAVNYAKQRTQFGRAIGSYQAIKHKLADVHIAIE
Sbjct 181 VVARAYEFGALATAAQLVGAGQALLEAAVNYAKQRTQFGRAIGSYQAIKHKLADVHIAIE 240
Query 241 LACPLVYGAAVSLEPRDVSAAKAAASEAALLAARWALQTHGAIGFTCEHDLSLWLLRVQA 300
LACPLVYGAAVSLEPRDVSAAKAAASEAALLAAR ALQTHGAIGFTCEHDLSLWLLRVQA
Sbjct 241 LACPLVYGAAVSLEPRDVSAAKAAASEAALLAARSALQTHGAIGFTCEHDLSLWLLRVQA 300
Query 301 LHSAWGTPQEHRRRVLEAL 319
LHSAWGTPQEHRRRVLEAL
Sbjct 301 LHSAWGTPQEHRRRVLEAL 319
>gi|289572215|ref|ZP_06452442.1| acyl-CoA dehydrogenase fadE32 [Mycobacterium tuberculosis K85]
gi|339633561|ref|YP_004725203.1| acyl-CoA dehydrogenase FADE32 [Mycobacterium africanum GM041182]
gi|289536646|gb|EFD41224.1| acyl-CoA dehydrogenase fadE32 [Mycobacterium tuberculosis K85]
gi|339332917|emb|CCC28644.1| putative acyl-CoA dehydrogenase FADE32 [Mycobacterium africanum
GM041182]
Length=319
Score = 622 bits (1605), Expect = 2e-176, Method: Compositional matrix adjust.
Identities = 316/319 (99%), Positives = 317/319 (99%), Gaps = 0/319 (0%)
Query 1 VTMEFALNEQQRDFAASIDAALGAADLPGVVRAWAAGDVAPGRKVWQQLANLGVTALGVA 60
+TMEFALNEQQRDFAASIDAALGAADLPGVVRAWAAGDVAPGRKVWQQLANLGVTALGVA
Sbjct 1 MTMEFALNEQQRDFAASIDAALGAADLPGVVRAWAAGDVAPGRKVWQQLANLGVTALGVA 60
Query 61 EKFDGLGASPVDLVVALERLGRWCVPGPVTESIAVAPILLAHDDQAERSHGLASGELIAT 120
EKFDGLGASPVDLVVALERLGRWCVPGPVTESIAVAPILLAHDDQAERSHGLASGELIAT
Sbjct 61 EKFDGLGASPVDLVVALERLGRWCVPGPVTESIAVAPILLAHDDQAERSHGLASGELIAT 120
Query 121 VAMPPRVPRAVDADTAGLVLLAGDGSVTEGTPGDCHRSVDPSRRLYEVAASGQAWRAPKD 180
VAMPPRVPRAVDADTAGLVLLAGDGSVTEGTPGDCHRSVDPSRRLYEVAASGQAWRAPKD
Sbjct 121 VAMPPRVPRAVDADTAGLVLLAGDGSVTEGTPGDCHRSVDPSRRLYEVAASGQAWRAPKD 180
Query 181 VVARAYEFGALATAAQLVGAGQALLEAAVNYAKQRTQFGRAIGSYQAIKHKLADVHIAIE 240
VVARAYEFGALATAAQLVGAGQALL AAVNYAKQRTQFGRAIGSYQAIKHKLADVHIAIE
Sbjct 181 VVARAYEFGALATAAQLVGAGQALLVAAVNYAKQRTQFGRAIGSYQAIKHKLADVHIAIE 240
Query 241 LACPLVYGAAVSLEPRDVSAAKAAASEAALLAARWALQTHGAIGFTCEHDLSLWLLRVQA 300
LACPLVYGAAVSLEPRDVSAAKAAASEAALLAAR ALQTHGAIGFTCEHDLSLWLLRVQA
Sbjct 241 LACPLVYGAAVSLEPRDVSAAKAAASEAALLAARSALQTHGAIGFTCEHDLSLWLLRVQA 300
Query 301 LHSAWGTPQEHRRRVLEAL 319
LHSAWGTPQEHRRRVLEAL
Sbjct 301 LHSAWGTPQEHRRRVLEAL 319
>gi|298527041|ref|ZP_07014450.1| acyl-CoA dehydrogenase FadE32 [Mycobacterium tuberculosis 94_M4241A]
gi|298496835|gb|EFI32129.1| acyl-CoA dehydrogenase FadE32 [Mycobacterium tuberculosis 94_M4241A]
gi|339296382|gb|AEJ48493.1| acyl-CoA dehydrogenase fadE31 [Mycobacterium tuberculosis CCDC5079]
Length=317
Score = 622 bits (1604), Expect = 2e-176, Method: Compositional matrix adjust.
Identities = 316/317 (99%), Positives = 316/317 (99%), Gaps = 0/317 (0%)
Query 3 MEFALNEQQRDFAASIDAALGAADLPGVVRAWAAGDVAPGRKVWQQLANLGVTALGVAEK 62
MEFALNEQQRDFAASIDAALGAADLPGVVRAWAAGDVAPGRKVWQQLANLGVTALGVAEK
Sbjct 1 MEFALNEQQRDFAASIDAALGAADLPGVVRAWAAGDVAPGRKVWQQLANLGVTALGVAEK 60
Query 63 FDGLGASPVDLVVALERLGRWCVPGPVTESIAVAPILLAHDDQAERSHGLASGELIATVA 122
FDGLGASPVDLVVALERLGRWCVPGPVTESIAVAPILLAHDDQAERSHGLASGELIATVA
Sbjct 61 FDGLGASPVDLVVALERLGRWCVPGPVTESIAVAPILLAHDDQAERSHGLASGELIATVA 120
Query 123 MPPRVPRAVDADTAGLVLLAGDGSVTEGTPGDCHRSVDPSRRLYEVAASGQAWRAPKDVV 182
MPPRVPRAVDADTAGLVLLAGDGSVTEGTPGDCHRSVDPSRRLYEVAASGQAWRAPKDVV
Sbjct 121 MPPRVPRAVDADTAGLVLLAGDGSVTEGTPGDCHRSVDPSRRLYEVAASGQAWRAPKDVV 180
Query 183 ARAYEFGALATAAQLVGAGQALLEAAVNYAKQRTQFGRAIGSYQAIKHKLADVHIAIELA 242
ARAYEFGALATAAQLVGAGQALLEAAVNYAKQRTQFGRAIGSYQAIKHKLADVHIAIELA
Sbjct 181 ARAYEFGALATAAQLVGAGQALLEAAVNYAKQRTQFGRAIGSYQAIKHKLADVHIAIELA 240
Query 243 CPLVYGAAVSLEPRDVSAAKAAASEAALLAARWALQTHGAIGFTCEHDLSLWLLRVQALH 302
CPLVYGAAVSLEPRDVSAAKAAASEAALLAAR ALQTHGAIGFTCEHDLSLWLLRVQALH
Sbjct 241 CPLVYGAAVSLEPRDVSAAKAAASEAALLAARSALQTHGAIGFTCEHDLSLWLLRVQALH 300
Query 303 SAWGTPQEHRRRVLEAL 319
SAWGTPQEHRRRVLEAL
Sbjct 301 SAWGTPQEHRRRVLEAL 317
>gi|339299983|gb|AEJ52093.1| acyl-CoA dehydrogenase fadE31 [Mycobacterium tuberculosis CCDC5180]
Length=317
Score = 622 bits (1603), Expect = 3e-176, Method: Compositional matrix adjust.
Identities = 315/317 (99%), Positives = 315/317 (99%), Gaps = 0/317 (0%)
Query 3 MEFALNEQQRDFAASIDAALGAADLPGVVRAWAAGDVAPGRKVWQQLANLGVTALGVAEK 62
MEFALNEQQRDFAASIDAALGAADLPGVVRAWAAGDVAPGRKVWQQLANLGVTALGVAEK
Sbjct 1 MEFALNEQQRDFAASIDAALGAADLPGVVRAWAAGDVAPGRKVWQQLANLGVTALGVAEK 60
Query 63 FDGLGASPVDLVVALERLGRWCVPGPVTESIAVAPILLAHDDQAERSHGLASGELIATVA 122
FDGLGASPVDLVVALERLGRWCVPGPVTESIAVAPILLAHDDQAERSHGLASGELIATVA
Sbjct 61 FDGLGASPVDLVVALERLGRWCVPGPVTESIAVAPILLAHDDQAERSHGLASGELIATVA 120
Query 123 MPPRVPRAVDADTAGLVLLAGDGSVTEGTPGDCHRSVDPSRRLYEVAASGQAWRAPKDVV 182
MPPRVPRAVDADTAGLVLLAGDGSVTEGTPGDCHRSVDPSRRLYEVAASGQAWRAPKDVV
Sbjct 121 MPPRVPRAVDADTAGLVLLAGDGSVTEGTPGDCHRSVDPSRRLYEVAASGQAWRAPKDVV 180
Query 183 ARAYEFGALATAAQLVGAGQALLEAAVNYAKQRTQFGRAIGSYQAIKHKLADVHIAIELA 242
ARAYEFGALATAAQLVGAGQALLEAAVNYAKQRTQFGR IGSYQAIKHKLADVHIAIELA
Sbjct 181 ARAYEFGALATAAQLVGAGQALLEAAVNYAKQRTQFGRTIGSYQAIKHKLADVHIAIELA 240
Query 243 CPLVYGAAVSLEPRDVSAAKAAASEAALLAARWALQTHGAIGFTCEHDLSLWLLRVQALH 302
CPLVYGAAVSLEPRDVSAAKAAASEAALLAAR ALQTHGAIGFTCEHDLSLWLLRVQALH
Sbjct 241 CPLVYGAAVSLEPRDVSAAKAAASEAALLAARSALQTHGAIGFTCEHDLSLWLLRVQALH 300
Query 303 SAWGTPQEHRRRVLEAL 319
SAWGTPQEHRRRVLEAL
Sbjct 301 SAWGTPQEHRRRVLEAL 317
>gi|289752276|ref|ZP_06511654.1| acyl-CoA dehydrogenase fadE32 [Mycobacterium tuberculosis T92]
gi|289692863|gb|EFD60292.1| acyl-CoA dehydrogenase fadE32 [Mycobacterium tuberculosis T92]
Length=269
Score = 527 bits (1358), Expect = 7e-148, Method: Compositional matrix adjust.
Identities = 268/269 (99%), Positives = 269/269 (100%), Gaps = 0/269 (0%)
Query 1 VTMEFALNEQQRDFAASIDAALGAADLPGVVRAWAAGDVAPGRKVWQQLANLGVTALGVA 60
+TMEFALNEQQRDFAASIDAALGAADLPGVVRAWAAGDVAPGRKVWQQLANLGVTALGVA
Sbjct 1 MTMEFALNEQQRDFAASIDAALGAADLPGVVRAWAAGDVAPGRKVWQQLANLGVTALGVA 60
Query 61 EKFDGLGASPVDLVVALERLGRWCVPGPVTESIAVAPILLAHDDQAERSHGLASGELIAT 120
EKFDGLGASPVDLVVALERLGRWCVPGPVTESIAVAPILLAHDDQAERSHGLASGELIAT
Sbjct 61 EKFDGLGASPVDLVVALERLGRWCVPGPVTESIAVAPILLAHDDQAERSHGLASGELIAT 120
Query 121 VAMPPRVPRAVDADTAGLVLLAGDGSVTEGTPGDCHRSVDPSRRLYEVAASGQAWRAPKD 180
VAMPPRVPRAVDADTAGLVLLAGDGSVTEGTPGDCHRSVDPSRRLYEVAASGQAWRAPKD
Sbjct 121 VAMPPRVPRAVDADTAGLVLLAGDGSVTEGTPGDCHRSVDPSRRLYEVAASGQAWRAPKD 180
Query 181 VVARAYEFGALATAAQLVGAGQALLEAAVNYAKQRTQFGRAIGSYQAIKHKLADVHIAIE 240
VVARAYEFGALATAAQLVGAGQALLEAAVNYAKQRTQFGRAIGSYQAIKHKLADVHIAIE
Sbjct 181 VVARAYEFGALATAAQLVGAGQALLEAAVNYAKQRTQFGRAIGSYQAIKHKLADVHIAIE 240
Query 241 LACPLVYGAAVSLEPRDVSAAKAAASEAA 269
LACPLVYGAAVSLEPRDVSAAKAAASEAA
Sbjct 241 LACPLVYGAAVSLEPRDVSAAKAAASEAA 269
>gi|240169778|ref|ZP_04748437.1| acyl-CoA dehydrogenase FadE32 [Mycobacterium kansasii ATCC 12478]
Length=319
Score = 493 bits (1268), Expect = 2e-137, Method: Compositional matrix adjust.
Identities = 263/322 (82%), Positives = 287/322 (90%), Gaps = 6/322 (1%)
Query 1 VTMEFALNEQQRDFAASIDAALGAADLPGVVRAWAAGDVAPGRKVWQQLANLGVTALGVA 60
+T++FAL++QQRDFAASIDAALGAADLPG VRAW+AGD APGRKVWQQLANLGVTAL V
Sbjct 1 MTVDFALDQQQRDFAASIDAALGAADLPGAVRAWSAGDAAPGRKVWQQLANLGVTALNVP 60
Query 61 EKFDGLGASPVDLVVALERLGRWCVPGPVTESIAVAPILLAHDDQAERSHGLASGELIAT 120
EKFDGL A PVDLVVALERLGRWCVPGPVTESIAVAP+LLA+DDQAER GLA+GELIAT
Sbjct 61 EKFDGLAADPVDLVVALERLGRWCVPGPVTESIAVAPVLLANDDQAERCAGLAAGELIAT 120
Query 121 VAMPPRVPRAVDADTAGLVLLAGDGSVTEGTPGDCHRSVDPSRRLYEVAASG---QAWRA 177
VA+PP+VPRAVDADTAGLVLLAG+ V EGTPG H SVDPSR LY+VAA+G QAW+A
Sbjct 121 VALPPQVPRAVDADTAGLVLLAGEAGVAEGTPGQRHASVDPSRHLYDVAAAGPNVQAWQA 180
Query 178 PKDVVARAYEFGALATAAQLVGAGQALLEAAVNYAKQRTQFGRAIGSYQAIKHKLADVHI 237
+ RAYEFG LATAAQLVGA +ALL AAV+YAKQRTQFGR IGSYQAIKHKLADVHI
Sbjct 181 D---IKRAYEFGVLATAAQLVGAAEALLSAAVDYAKQRTQFGRVIGSYQAIKHKLADVHI 237
Query 238 AIELACPLVYGAAVSLEPRDVSAAKAAASEAALLAARWALQTHGAIGFTCEHDLSLWLLR 297
A+ELA PLVYGAA+SL+PRDVSAAK AA EA LLAAR ALQT+GAIGFT EHDLSLWLL+
Sbjct 238 AVELARPLVYGAALSLQPRDVSAAKVAAGEAGLLAARSALQTYGAIGFTQEHDLSLWLLK 297
Query 298 VQALHSAWGTPQEHRRRVLEAL 319
VQAL SAWGTP+ HRRRVLEAL
Sbjct 298 VQALRSAWGTPEVHRRRVLEAL 319
>gi|296166608|ref|ZP_06849037.1| acyl-CoA dehydrogenase FadE32 [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295898038|gb|EFG77615.1| acyl-CoA dehydrogenase FadE32 [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length=315
Score = 469 bits (1208), Expect = 2e-130, Method: Compositional matrix adjust.
Identities = 252/317 (80%), Positives = 276/317 (88%), Gaps = 3/317 (0%)
Query 3 MEFALNEQQRDFAASIDAALGAADLPGVVRAWAAGDVAPGRKVWQQLANLGVTALGVAEK 62
M+FAL+EQQRDFAASIDAAL AADLPGV+RAW+AGD APGRKVW QLA+LGVTAL V EK
Sbjct 1 MKFALDEQQRDFAASIDAALSAADLPGVIRAWSAGDTAPGRKVWGQLADLGVTALAVPEK 60
Query 63 FDGLGASPVDLVVALERLGRWCVPGPVTESIAVAPILLAHDDQAERSHGLASGELIATVA 122
FDG+GA P+DLVVALERLGRWCVPGPV ESIAVAP+LLA D QA+R LASGELIATVA
Sbjct 61 FDGIGADPIDLVVALERLGRWCVPGPVAESIAVAPVLLASDAQADRCAALASGELIATVA 120
Query 123 MPPRVPRAVDADTAGLVLLAGDGSVTEGTPGDCHRSVDPSRRLYEVAASGQAWRAPKDVV 182
MPP+ PRAVDA+TAG+VLL D V+E P D H SVDPSR LY+V A+GQAW+A ++
Sbjct 121 MPPQAPRAVDAETAGVVLLVTDEGVSEAAPRDWHESVDPSRPLYDVTATGQAWQADRE-- 178
Query 183 ARAYEFGALATAAQLVGAGQALLEAAVNYAKQRTQFGRAIGSYQAIKHKLADVHIAIELA 242
RAYEFGALATAAQLVGA +ALL V YAKQR+QFGR IGSYQAIKHKLADVHIAIELA
Sbjct 179 -RAYEFGALATAAQLVGAAEALLRDTVEYAKQRSQFGRVIGSYQAIKHKLADVHIAIELA 237
Query 243 CPLVYGAAVSLEPRDVSAAKAAASEAALLAARWALQTHGAIGFTCEHDLSLWLLRVQALH 302
PL+YGAA+SL+ RDVSAAKAAASEA LLAAR ALQTHGAIGFT EHDLSLWLLRVQAL
Sbjct 238 RPLLYGAALSLDARDVSAAKAAASEAGLLAARSALQTHGAIGFTQEHDLSLWLLRVQALR 297
Query 303 SAWGTPQEHRRRVLEAL 319
SAWGTP+ HRRRVLEAL
Sbjct 298 SAWGTPEAHRRRVLEAL 314
>gi|254822645|ref|ZP_05227646.1| putative acyl-CoA dehydrogenase [Mycobacterium intracellulare
ATCC 13950]
Length=310
Score = 465 bits (1196), Expect = 5e-129, Method: Compositional matrix adjust.
Identities = 250/313 (80%), Positives = 271/313 (87%), Gaps = 3/313 (0%)
Query 3 MEFALNEQQRDFAASIDAALGAADLPGVVRAWAAGDVAPGRKVWQQLANLGVTALGVAEK 62
M FAL+EQQRDFAASIDAALG+ADLP VRAWAAGD APGRKVW+QLANLGVTAL V EK
Sbjct 1 MRFALDEQQRDFAASIDAALGSADLPSAVRAWAAGDTAPGRKVWEQLANLGVTALAVPEK 60
Query 63 FDGLGASPVDLVVALERLGRWCVPGPVTESIAVAPILLAHDDQAERSHGLASGELIATVA 122
FDG+GA P+DLV+ALERLGRWCVPGPV ESIAVAP+LL DD AER GLASGELIATVA
Sbjct 61 FDGIGADPIDLVLALERLGRWCVPGPVVESIAVAPVLLDSDDHAERCAGLASGELIATVA 120
Query 123 MPPRVPRAVDADTAGLVLLAGDGSVTEGTPGDCHRSVDPSRRLYEVAASGQAWRAPKDVV 182
+PPRVPRAVDAD A LVLLAGD VTE T G+ H SVDPSR LY+V +G AW A V
Sbjct 121 LPPRVPRAVDADVANLVLLAGDEGVTEATAGEEHESVDPSRHLYDVTPAGSAWEAD---V 177
Query 183 ARAYEFGALATAAQLVGAGQALLEAAVNYAKQRTQFGRAIGSYQAIKHKLADVHIAIELA 242
RAYEFG L TAAQLVGA +AL +AAV+YAKQRTQFGR IGSYQAIKHKLADVHIAIELA
Sbjct 178 KRAYEFGTLGTAAQLVGAAEALRDAAVDYAKQRTQFGRVIGSYQAIKHKLADVHIAIELA 237
Query 243 CPLVYGAAVSLEPRDVSAAKAAASEAALLAARWALQTHGAIGFTCEHDLSLWLLRVQALH 302
PLV+GAA++L+PRDVSAAKAAA++A LLAAR ALQTHGAIGFT EHDLSL LLRVQAL
Sbjct 238 RPLVHGAALTLDPRDVSAAKAAAADAGLLAARSALQTHGAIGFTQEHDLSLLLLRVQALR 297
Query 303 SAWGTPQEHRRRV 315
SAWGTP+EHRRRV
Sbjct 298 SAWGTPEEHRRRV 310
>gi|342862392|ref|ZP_08719032.1| FadE32 [Mycobacterium colombiense CECT 3035]
gi|342130063|gb|EGT83397.1| FadE32 [Mycobacterium colombiense CECT 3035]
Length=314
Score = 464 bits (1193), Expect = 1e-128, Method: Compositional matrix adjust.
Identities = 255/317 (81%), Positives = 281/317 (89%), Gaps = 3/317 (0%)
Query 3 MEFALNEQQRDFAASIDAALGAADLPGVVRAWAAGDVAPGRKVWQQLANLGVTALGVAEK 62
M+FAL+EQQRDFAASIDAALGAADLPG VRAW+AGD APGRKVW+QLANLGVTAL V EK
Sbjct 1 MKFALDEQQRDFAASIDAALGAADLPGAVRAWSAGDTAPGRKVWEQLANLGVTALAVPEK 60
Query 63 FDGLGASPVDLVVALERLGRWCVPGPVTESIAVAPILLAHDDQAERSHGLASGELIATVA 122
FDG+ A PVDLVVA+ERLGRWCVPGPV ESIAVAP+LLA D AER GLASGELIATVA
Sbjct 61 FDGIEAHPVDLVVAIERLGRWCVPGPVAESIAVAPVLLASGDHAERCAGLASGELIATVA 120
Query 123 MPPRVPRAVDADTAGLVLLAGDGSVTEGTPGDCHRSVDPSRRLYEVAASGQAWRAPKDVV 182
+PP+ PRAV AD AGLVLLAG+ VTE TPG+ H SVDPSR+L++V A+G AW+A V
Sbjct 121 LPPQAPRAVGADVAGLVLLAGEDGVTEATPGEVHESVDPSRKLFDVTATGAAWQAD---V 177
Query 183 ARAYEFGALATAAQLVGAGQALLEAAVNYAKQRTQFGRAIGSYQAIKHKLADVHIAIELA 242
RAYEFGALATAAQL+GA +AL + AV+YAKQRTQFGR IGSYQAIKHKLADVHIAIELA
Sbjct 178 KRAYEFGALATAAQLIGAAEALRDGAVDYAKQRTQFGRVIGSYQAIKHKLADVHIAIELA 237
Query 243 CPLVYGAAVSLEPRDVSAAKAAASEAALLAARWALQTHGAIGFTCEHDLSLWLLRVQALH 302
PLVYGAA++++PRDVSAAKAAASEAALLAAR ALQTHGAIGFT EHDLSL LLRVQAL
Sbjct 238 RPLVYGAALTMDPRDVSAAKAAASEAALLAARSALQTHGAIGFTQEHDLSLLLLRVQALR 297
Query 303 SAWGTPQEHRRRVLEAL 319
+AWGTP+EHRRRVLEAL
Sbjct 298 TAWGTPEEHRRRVLEAL 314
>gi|118462358|ref|YP_879878.1| acyl-CoA dehydrogenase [Mycobacterium avium 104]
gi|254773555|ref|ZP_05215071.1| putative acyl-CoA dehydrogenase [Mycobacterium avium subsp. avium
ATCC 25291]
gi|118163645|gb|ABK64542.1| putative acyl-CoA dehydrogenase [Mycobacterium avium 104]
Length=314
Score = 443 bits (1140), Expect = 2e-122, Method: Compositional matrix adjust.
Identities = 249/317 (79%), Positives = 271/317 (86%), Gaps = 3/317 (0%)
Query 3 MEFALNEQQRDFAASIDAALGAADLPGVVRAWAAGDVAPGRKVWQQLANLGVTALGVAEK 62
M+FAL+EQQRDFAASIDAALGAADLP VRAWA GD APGRKVW+QLANLGVTAL V EK
Sbjct 1 MKFALDEQQRDFAASIDAALGAADLPAAVRAWAVGDTAPGRKVWEQLANLGVTALAVPEK 60
Query 63 FDGLGASPVDLVVALERLGRWCVPGPVTESIAVAPILLAHDDQAERSHGLASGELIATVA 122
FDG+ A P+DLVVA+ERLGRWCVPGPV ESIAVAP+LLA D+ AER LASGELIATVA
Sbjct 61 FDGIEAEPIDLVVAIERLGRWCVPGPVVESIAVAPVLLAGDEHAERCAALASGELIATVA 120
Query 123 MPPRVPRAVDADTAGLVLLAGDGSVTEGTPGDCHRSVDPSRRLYEVAASGQAWRAPKDVV 182
+PP+VPRAVDA+ AGLVLLA V E G H SVDPSRRLY+V +G W+A V
Sbjct 121 LPPQVPRAVDAEEAGLVLLADQDGVAEAAAGRQHASVDPSRRLYDVEPTGDRWQAD---V 177
Query 183 ARAYEFGALATAAQLVGAGQALLEAAVNYAKQRTQFGRAIGSYQAIKHKLADVHIAIELA 242
R YEFGALATAAQLVGA +AL +AAV+YAKQRTQFGR IGSYQAIKHKLADVHIAIELA
Sbjct 178 GRGYEFGALATAAQLVGAAEALRDAAVDYAKQRTQFGRVIGSYQAIKHKLADVHIAIELA 237
Query 243 CPLVYGAAVSLEPRDVSAAKAAASEAALLAARWALQTHGAIGFTCEHDLSLWLLRVQALH 302
PLVYGAA++L+PRDVSAAKAAAS+AALLAAR ALQTHGAIGFT EHDLSL LLRVQA+
Sbjct 238 RPLVYGAALTLQPRDVSAAKAAASDAALLAARSALQTHGAIGFTQEHDLSLLLLRVQAVR 297
Query 303 SAWGTPQEHRRRVLEAL 319
SAWG PQ HRRRVLEAL
Sbjct 298 SAWGPPQVHRRRVLEAL 314
>gi|41406602|ref|NP_959438.1| FadE32 [Mycobacterium avium subsp. paratuberculosis K-10]
gi|41394951|gb|AAS02821.1| FadE32 [Mycobacterium avium subsp. paratuberculosis K-10]
gi|336458498|gb|EGO37471.1| acyl-CoA dehydrogenase [Mycobacterium avium subsp. paratuberculosis
S397]
Length=314
Score = 443 bits (1139), Expect = 2e-122, Method: Compositional matrix adjust.
Identities = 249/317 (79%), Positives = 273/317 (87%), Gaps = 3/317 (0%)
Query 3 MEFALNEQQRDFAASIDAALGAADLPGVVRAWAAGDVAPGRKVWQQLANLGVTALGVAEK 62
M+FAL+EQQRDFAASIDAALGAADLP VRAWAAGD APGRKVW+QLANLGVTAL V EK
Sbjct 1 MKFALDEQQRDFAASIDAALGAADLPAAVRAWAAGDTAPGRKVWEQLANLGVTALAVPEK 60
Query 63 FDGLGASPVDLVVALERLGRWCVPGPVTESIAVAPILLAHDDQAERSHGLASGELIATVA 122
FDG+ A P+DLVVA+ERLGRWCVPGPV ESIAVAP+LLA D+ AER LASGELIATVA
Sbjct 61 FDGIEAEPIDLVVAIERLGRWCVPGPVVESIAVAPVLLAGDEHAERCAALASGELIATVA 120
Query 123 MPPRVPRAVDADTAGLVLLAGDGSVTEGTPGDCHRSVDPSRRLYEVAASGQAWRAPKDVV 182
+PP+VPRAVDA+ AGLVLLA V E G H SVDPSRRLY+V A+G W+A +
Sbjct 121 LPPQVPRAVDAEEAGLVLLANQDGVAEAAAGWQHASVDPSRRLYDVEATGDRWQAD---I 177
Query 183 ARAYEFGALATAAQLVGAGQALLEAAVNYAKQRTQFGRAIGSYQAIKHKLADVHIAIELA 242
R YEFGALATAAQLVGA +AL +AAV+YAKQRTQFGR IGSYQAIKHKLADVHIAIELA
Sbjct 178 GRGYEFGALATAAQLVGAAEALRDAAVDYAKQRTQFGRVIGSYQAIKHKLADVHIAIELA 237
Query 243 CPLVYGAAVSLEPRDVSAAKAAASEAALLAARWALQTHGAIGFTCEHDLSLWLLRVQALH 302
PLVYGAA++L+PRDVSAAKAAAS+AALLAAR ALQTHGAIGFT EHDLSL LLRVQA+
Sbjct 238 RPLVYGAALTLQPRDVSAAKAAASDAALLAARSALQTHGAIGFTQEHDLSLLLLRVQAVR 297
Query 303 SAWGTPQEHRRRVLEAL 319
SAWG PQ HR+RVLEAL
Sbjct 298 SAWGPPQVHRQRVLEAL 314
>gi|118619308|ref|YP_907640.1| acyl-CoA dehydrogenase FadE32 [Mycobacterium ulcerans Agy99]
gi|118571418|gb|ABL06169.1| acyl-CoA dehydrogenase FadE32 [Mycobacterium ulcerans Agy99]
Length=311
Score = 436 bits (1121), Expect = 3e-120, Method: Compositional matrix adjust.
Identities = 253/317 (80%), Positives = 274/317 (87%), Gaps = 6/317 (1%)
Query 3 MEFALNEQQRDFAASIDAALGAADLPGVVRAWAAGDVAPGRKVWQQLANLGVTALGVAEK 62
MEFAL+EQQRDFAASIDAAL AADLP VRAW+AGDVAPG KVW+QLANLGVTAL V+EK
Sbjct 1 MEFALDEQQRDFAASIDAALAAADLPAAVRAWSAGDVAPGHKVWEQLANLGVTALTVSEK 60
Query 63 FDGLGASPVDLVVALERLGRWCVPGPVTESIAVAPILLAHDDQAERSHGLASGELIATVA 122
FDGLGA P+DLVVALERLGRWCVPGPV ESIAVAP+LLA DD RS GLA GELIATVA
Sbjct 61 FDGLGAHPIDLVVALERLGRWCVPGPVAESIAVAPVLLADDD---RSAGLACGELIATVA 117
Query 123 MPPRVPRAVDADTAGLVLLAGDGSVTEGTPGDCHRSVDPSRRLYEVAASGQAWRAPKDVV 182
+PP PRAVDADTAGLVL+AG+ V E DCH S+DPSRR Y+V A+G AW+A V
Sbjct 118 LPPHAPRAVDADTAGLVLVAGESGVCEAAVADCHESIDPSRRSYDVTATGAAWQAD---V 174
Query 183 ARAYEFGALATAAQLVGAGQALLEAAVNYAKQRTQFGRAIGSYQAIKHKLADVHIAIELA 242
RAYEFGALATAAQL+GA +ALL+A V+YAKQRTQFGR IGSYQAIKHKLADVHIAIELA
Sbjct 175 KRAYEFGALATAAQLIGAAEALLDATVDYAKQRTQFGRVIGSYQAIKHKLADVHIAIELA 234
Query 243 CPLVYGAAVSLEPRDVSAAKAAASEAALLAARWALQTHGAIGFTCEHDLSLWLLRVQALH 302
PLV+GAA+SL+PRDVSAAK AA AA LAAR ALQTHGAIGFT EHDLSLWLLRVQAL
Sbjct 235 RPLVHGAALSLQPRDVSAAKVAAGGAARLAARSALQTHGAIGFTQEHDLSLWLLRVQALR 294
Query 303 SAWGTPQEHRRRVLEAL 319
SAWGTP+ HRRRVLEAL
Sbjct 295 SAWGTPEVHRRRVLEAL 311
>gi|183985020|ref|YP_001853311.1| acyl-CoA dehydrogenase FadE32 [Mycobacterium marinum M]
gi|183178346|gb|ACC43456.1| acyl-CoA dehydrogenase FadE32 [Mycobacterium marinum M]
Length=311
Score = 434 bits (1117), Expect = 7e-120, Method: Compositional matrix adjust.
Identities = 252/317 (80%), Positives = 276/317 (88%), Gaps = 6/317 (1%)
Query 3 MEFALNEQQRDFAASIDAALGAADLPGVVRAWAAGDVAPGRKVWQQLANLGVTALGVAEK 62
MEFAL+EQQRDFAASIDAAL AADLP VRAW+AGDVAPG KVW+QLANLGVTAL V+EK
Sbjct 1 MEFALDEQQRDFAASIDAALAAADLPAAVRAWSAGDVAPGHKVWEQLANLGVTALTVSEK 60
Query 63 FDGLGASPVDLVVALERLGRWCVPGPVTESIAVAPILLAHDDQAERSHGLASGELIATVA 122
FDGLGA P+DLVVALERLGRWCVPGPV ESIAVAP+LLA DD RS GLA GELIATVA
Sbjct 61 FDGLGAHPIDLVVALERLGRWCVPGPVAESIAVAPVLLADDD---RSAGLACGELIATVA 117
Query 123 MPPRVPRAVDADTAGLVLLAGDGSVTEGTPGDCHRSVDPSRRLYEVAASGQAWRAPKDVV 182
+PP PRAVDADTAGLVL+AG+ V+E +CH S+DPSRR Y+V A+G W+A V
Sbjct 118 LPPHAPRAVDADTAGLVLVAGESGVSEAAVANCHESIDPSRRSYDVTATGATWQAD---V 174
Query 183 ARAYEFGALATAAQLVGAGQALLEAAVNYAKQRTQFGRAIGSYQAIKHKLADVHIAIELA 242
RAYEFGALATAAQL+GA +ALL+A V+YAKQRTQFGR IGSYQAIKHKLADVHIAIELA
Sbjct 175 KRAYEFGALATAAQLIGAAEALLDATVDYAKQRTQFGRVIGSYQAIKHKLADVHIAIELA 234
Query 243 CPLVYGAAVSLEPRDVSAAKAAASEAALLAARWALQTHGAIGFTCEHDLSLWLLRVQALH 302
PLV+GAA+SL+PRDVSAAK AA +AALLAAR ALQTHGAIGFT EHDLSLWLLRVQAL
Sbjct 235 RPLVHGAALSLQPRDVSAAKVAAGDAALLAARSALQTHGAIGFTQEHDLSLWLLRVQALR 294
Query 303 SAWGTPQEHRRRVLEAL 319
SAWGTP+ HRRRVLEAL
Sbjct 295 SAWGTPEVHRRRVLEAL 311
>gi|126437645|ref|YP_001073336.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium
sp. JLS]
gi|126237445|gb|ABO00846.1| acyl-CoA dehydrogenase domain protein [Mycobacterium sp. JLS]
Length=317
Score = 417 bits (1072), Expect = 1e-114, Method: Compositional matrix adjust.
Identities = 233/323 (73%), Positives = 263/323 (82%), Gaps = 12/323 (3%)
Query 3 MEFALNEQQRDFAASIDAALGAADLPGVVRAWAAGDVAPGRKVWQQLANLGVTALGVAEK 62
M F L++QQRDFAASIDAALGAAD+P VRAW+ GD A GRKVW LA+LGVTAL VAE+
Sbjct 1 MNFELDDQQRDFAASIDAALGAADVPAAVRAWSEGDTAHGRKVWATLADLGVTALMVAEE 60
Query 63 FDGLGASPVDLVVALERLGRWCVPGPVTESIAVAPILLAHDDQAERSHGLASGELIATVA 122
+DG+ A+PVDLVVA ERLGRWCVPGPV ES+AVAP+LL D ERS LA+GEL+ TVA
Sbjct 61 YDGIDATPVDLVVAAERLGRWCVPGPVVESVAVAPVLLRGD---ERSAALAAGELVVTVA 117
Query 123 MPPRVPRAVDADTAGLVLLAGDGSVTEGTPGDCHRSVDPSRRLYEVAASGQAWRAPKDVV 182
+PP VPRA+DAD+AGLVLLA DGSV+E T H SVDP+R+L+EV ASG A D
Sbjct 118 LPPHVPRALDADSAGLVLLAQDGSVSEATAATQHESVDPARKLFEVTASGAVREADVD-- 175
Query 183 ARAYEFGALATAAQLVGAGQALLEAAVNYAKQRTQFGRAIGSYQAIKHKLADVHIAIELA 242
RA+EFG LATAAQLVGA QA+L+ +V+YAKQR QFGRAIGSYQAIKHKLADVHIA+ELA
Sbjct 176 -RAFEFGVLATAAQLVGAAQAMLDQSVDYAKQRHQFGRAIGSYQAIKHKLADVHIAVELA 234
Query 243 CPLVYGAAVSL------EPRDVSAAKAAASEAALLAARWALQTHGAIGFTCEHDLSLWLL 296
PLVYGAA+SL RDVSAAK AAS+AA+LAAR ALQTHGAIGFT EHDLSLWLL
Sbjct 235 RPLVYGAALSLGDGSPDTARDVSAAKVAASDAAMLAARSALQTHGAIGFTHEHDLSLWLL 294
Query 297 RVQALHSAWGTPQEHRRRVLEAL 319
RVQAL SAWG+P HR RVLEA
Sbjct 295 RVQALRSAWGSPTWHRTRVLEAF 317
>gi|108801659|ref|YP_641856.1| acyl-CoA dehydrogenase-like protein [Mycobacterium sp. MCS]
gi|119870810|ref|YP_940762.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium
sp. KMS]
gi|108772078|gb|ABG10800.1| acyl-CoA dehydrogenase-like protein [Mycobacterium sp. MCS]
gi|119696899|gb|ABL93972.1| acyl-CoA dehydrogenase domain protein [Mycobacterium sp. KMS]
Length=317
Score = 415 bits (1066), Expect = 5e-114, Method: Compositional matrix adjust.
Identities = 232/323 (72%), Positives = 262/323 (82%), Gaps = 12/323 (3%)
Query 3 MEFALNEQQRDFAASIDAALGAADLPGVVRAWAAGDVAPGRKVWQQLANLGVTALGVAEK 62
M F L++QQRDFAASIDAALGAAD+P VRAW+ GD A GRKVW LA+LGVTAL VAE+
Sbjct 1 MNFELDDQQRDFAASIDAALGAADVPAAVRAWSEGDTAHGRKVWATLADLGVTALMVAEE 60
Query 63 FDGLGASPVDLVVALERLGRWCVPGPVTESIAVAPILLAHDDQAERSHGLASGELIATVA 122
+DG+ A+PVDLVVA ERLGRWCVPGPV ES+AVAP+LL D ERS LA+GEL+ VA
Sbjct 61 YDGIDATPVDLVVAAERLGRWCVPGPVVESVAVAPVLLRGD---ERSAALAAGELVVAVA 117
Query 123 MPPRVPRAVDADTAGLVLLAGDGSVTEGTPGDCHRSVDPSRRLYEVAASGQAWRAPKDVV 182
+PP VPRA+DAD+AGLVLLA DGSV+E T H SVDP+R+L+EV ASG A D
Sbjct 118 LPPHVPRALDADSAGLVLLAQDGSVSEATAATQHESVDPARKLFEVTASGAVREADVD-- 175
Query 183 ARAYEFGALATAAQLVGAGQALLEAAVNYAKQRTQFGRAIGSYQAIKHKLADVHIAIELA 242
RA+EFG LATAAQLVGA QA+L+ +V+YAKQR QFGRAIGSYQAIKHKLADVHIA+ELA
Sbjct 176 -RAFEFGVLATAAQLVGAAQAMLDQSVDYAKQRHQFGRAIGSYQAIKHKLADVHIAVELA 234
Query 243 CPLVYGAAVSL------EPRDVSAAKAAASEAALLAARWALQTHGAIGFTCEHDLSLWLL 296
PLVYGAA+SL RDVSAAK AAS+AA+LAAR ALQTHGAIGFT EHDLSLWLL
Sbjct 235 RPLVYGAALSLGDGSPDTARDVSAAKVAASDAAMLAARSALQTHGAIGFTHEHDLSLWLL 294
Query 297 RVQALHSAWGTPQEHRRRVLEAL 319
RVQAL SAWG+P HR RVLEA
Sbjct 295 RVQALRSAWGSPTWHRTRVLEAF 317
>gi|118468829|ref|YP_890239.1| acyl-CoA dehydrogenase [Mycobacterium smegmatis str. MC2 155]
gi|118170116|gb|ABK71012.1| putative acyl-CoA dehydrogenase [Mycobacterium smegmatis str.
MC2 155]
Length=318
Score = 411 bits (1056), Expect = 7e-113, Method: Compositional matrix adjust.
Identities = 240/323 (75%), Positives = 260/323 (81%), Gaps = 12/323 (3%)
Query 3 MEFALNEQQRDFAASIDAALGAADLPGVVRAWAAGDVAPGRKVWQQLANLGVTALGVAEK 62
M F +EQQRDFAASIDAALGA+D+P VRAW GD APGRKVW QL +LGVTAL V EK
Sbjct 1 MNFETDEQQRDFAASIDAALGASDVPAAVRAWGEGDTAPGRKVWAQLTDLGVTALLVPEK 60
Query 63 FDGLGASPVDLVVALERLGRWCVPGPVTESIAVAPILLAHDDQAERSHGLASGELIATVA 122
FDG+ A P DLVVALERLG W VPGPVTESIAVAPILLA D ER LASGELIATVA
Sbjct 61 FDGIEAHPTDLVVALERLGYWGVPGPVTESIAVAPILLADD---ERCGALASGELIATVA 117
Query 123 MPPRVPRAVDADTAGLVLLAGDGSVTEGTPGDCHRSVDPSRRLYEVAASGQAWRAPKDVV 182
+PP+VPRAVDADTAGL+LLA DG V +G+ G H SVDP+R+L++VAASG A A
Sbjct 118 LPPQVPRAVDADTAGLILLAQDGQVHDGSAGASHESVDPTRKLFDVAASGDARTAD---T 174
Query 183 ARAYEFGALATAAQLVGAGQALLEAAVNYAKQRTQFGRAIGSYQAIKHKLADVHIAIELA 242
A AYEFG LATAAQLVGAGQA+L+ AV YAKQRTQFGR IGSYQAIKHKLADVHIA+ELA
Sbjct 175 ATAYEFGVLATAAQLVGAGQAMLDQAVEYAKQRTQFGRVIGSYQAIKHKLADVHIAVELA 234
Query 243 CPLVYGAAVSL------EPRDVSAAKAAASEAALLAARWALQTHGAIGFTCEHDLSLWLL 296
PLVYGAA+SL RDVSAAK AA++AALLAAR ALQTHGAIGFT EHDLSL LL
Sbjct 235 RPLVYGAALSLADGSSDTARDVSAAKVAAADAALLAARSALQTHGAIGFTQEHDLSLLLL 294
Query 297 RVQALHSAWGTPQEHRRRVLEAL 319
RVQAL AWG P HRRRVLE L
Sbjct 295 RVQALRPAWGDPALHRRRVLEGL 317
>gi|120406236|ref|YP_956065.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium
vanbaalenii PYR-1]
gi|119959054|gb|ABM16059.1| acyl-CoA dehydrogenase domain protein [Mycobacterium vanbaalenii
PYR-1]
Length=319
Score = 405 bits (1041), Expect = 4e-111, Method: Compositional matrix adjust.
Identities = 235/323 (73%), Positives = 262/323 (82%), Gaps = 12/323 (3%)
Query 3 MEFALNEQQRDFAASIDAALGAADLPGVVRAWAAGDVAPGRKVWQQLANLGVTALGVAEK 62
M F ++EQQRDFAASIDAALGAAD+P VRAW GD APGRKVW QLA+LGVTAL V EK
Sbjct 1 MNFEIDEQQRDFAASIDAALGAADVPAAVRAWGEGDTAPGRKVWSQLADLGVTALMVPEK 60
Query 63 FDGLGASPVDLVVALERLGRWCVPGPVTESIAVAPILLAHDDQAERSHGLASGELIATVA 122
FDG+ A PVDLVVALERLGRW VPGPV ES+AVAP+LLA DD RS LA+GELIATVA
Sbjct 61 FDGIEAHPVDLVVALERLGRWNVPGPVAESVAVAPVLLADDD---RSAALAAGELIATVA 117
Query 123 MPPRVPRAVDADTAGLVLLAGDGSVTEGTPGDCHRSVDPSRRLYEVAASGQAWRAPKDVV 182
PP VPRAV+ADTAGL+LLA DGSV+ + G H SVDPSR+L+EV+A G R D V
Sbjct 118 APPLVPRAVNADTAGLILLAEDGSVSNASAGAEHESVDPSRKLFEVSAYGD--RKAAD-V 174
Query 183 ARAYEFGALATAAQLVGAGQALLEAAVNYAKQRTQFGRAIGSYQAIKHKLADVHIAIELA 242
ARA+EFGALAT+A LVGA QA+L+A+V YAKQR+QFG IG+YQAIKHKLADV IA+ELA
Sbjct 175 ARAFEFGALATSALLVGAAQAMLDASVEYAKQRSQFGTVIGTYQAIKHKLADVLIAVELA 234
Query 243 CPLVYGAAVSLEP------RDVSAAKAAASEAALLAARWALQTHGAIGFTCEHDLSLWLL 296
PLVYGAA+SL RDVSAAK AA++AALLAAR +LQTHGAIGFT EHDLSL LL
Sbjct 235 RPLVYGAALSLADGSTDTGRDVSAAKVAAADAALLAARSSLQTHGAIGFTQEHDLSLLLL 294
Query 297 RVQALHSAWGTPQEHRRRVLEAL 319
RVQAL AWG P HRRRVLEAL
Sbjct 295 RVQALRPAWGDPTWHRRRVLEAL 317
>gi|145222070|ref|YP_001132748.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium
gilvum PYR-GCK]
gi|315446188|ref|YP_004079067.1| acyl-CoA dehydrogenase [Mycobacterium sp. Spyr1]
gi|145214556|gb|ABP43960.1| acyl-CoA dehydrogenase domain protein [Mycobacterium gilvum PYR-GCK]
gi|315264491|gb|ADU01233.1| acyl-CoA dehydrogenase [Mycobacterium sp. Spyr1]
Length=319
Score = 401 bits (1031), Expect = 7e-110, Method: Compositional matrix adjust.
Identities = 234/323 (73%), Positives = 258/323 (80%), Gaps = 12/323 (3%)
Query 3 MEFALNEQQRDFAASIDAALGAADLPGVVRAWAAGDVAPGRKVWQQLANLGVTALGVAEK 62
M F +++QQRDFAASIDAALGAADLP VRAW GD APGRKVW QL +LGVTAL V EK
Sbjct 1 MNFEIDDQQRDFAASIDAALGAADLPAAVRAWGEGDTAPGRKVWSQLTDLGVTALMVPEK 60
Query 63 FDGLGASPVDLVVALERLGRWCVPGPVTESIAVAPILLAHDDQAERSHGLASGELIATVA 122
FDG+ A PVDLVVALERLGRW VPGPVTESIAVAPILL DD R LASGELIATVA
Sbjct 61 FDGIEAHPVDLVVALERLGRWNVPGPVTESIAVAPILLGDDD---RVGALASGELIATVA 117
Query 123 MPPRVPRAVDADTAGLVLLAGDGSVTEGTPGDCHRSVDPSRRLYEVAASGQAWRAPKDVV 182
PP V RAVDADTAGL+LLA +G+V + G H SVDP+R+L+EV ASG+A A V
Sbjct 118 APPLVSRAVDADTAGLILLATEGAVADAEMGTQHESVDPARKLFEVTASGEARAAD---V 174
Query 183 ARAYEFGALATAAQLVGAGQALLEAAVNYAKQRTQFGRAIGSYQAIKHKLADVHIAIELA 242
RA+EFGALATAAQLVGA QA+L+A+V YAKQR+QFG IG+YQAIKHKLADV IA+ELA
Sbjct 175 ERAFEFGALATAAQLVGAAQAMLDASVEYAKQRSQFGTIIGTYQAIKHKLADVLIAVELA 234
Query 243 CPLVYGAAVSL------EPRDVSAAKAAASEAALLAARWALQTHGAIGFTCEHDLSLWLL 296
PLVYGAA+SL RDVSAAK AA++AALLAAR +LQTHGAIGFT EHDLSL LL
Sbjct 235 RPLVYGAALSLADGSQDTARDVSAAKVAAADAALLAARSSLQTHGAIGFTQEHDLSLLLL 294
Query 297 RVQALHSAWGTPQEHRRRVLEAL 319
RVQAL AWG P HR RVLEAL
Sbjct 295 RVQALRPAWGDPTWHRHRVLEAL 317
>gi|169627697|ref|YP_001701346.1| acyl-CoA dehydrogenase FadE [Mycobacterium abscessus ATCC 19977]
gi|169239664|emb|CAM60692.1| Probable acyl-CoA dehydrogenase FadE [Mycobacterium abscessus]
Length=321
Score = 357 bits (916), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 213/329 (65%), Positives = 250/329 (76%), Gaps = 20/329 (6%)
Query 3 MEFALNEQQRDFAASIDAALGAADLPGVVRAWAAGDVAPGRKVWQQLANLGVTALGVAEK 62
M+F L+ QQRDFAASIDAAL AD+P RAWAAG+ PG VW LA LGVTAL V+EK
Sbjct 1 MKFDLDTQQRDFAASIDAALSVADVPAAARAWAAGNHGPGLAVWSTLAELGVTALAVSEK 60
Query 63 FDGLGASPVDLVVALERLGRWCVPGPVTESIAVAPILL-AHDDQAERSHGLASGELIATV 121
+DG+GA PVDLVVALE LG+W VPGPV ES+AVAP+LL +H+D AE S LASGELIATV
Sbjct 61 YDGIGAHPVDLVVALEGLGKWAVPGPVVESVAVAPVLLSSHEDGAEPSTRLASGELIATV 120
Query 122 AMPPRVPRAVDADTAGLVLLAGDGSVTEGTPGDCHRSVDPSRRLYEVAASGQAWRAPKDV 181
A PP PRA+DAD AGLVL+A D + E G H S+D +RR+++V PK+
Sbjct 121 AAPPIAPRALDADIAGLVLIADDIGIREAQAGAQHESIDATRRVFDV--------QPKEA 172
Query 182 -----VARAYEFGALATAAQLVGAGQALLEAAVNYAKQRTQFGRAIGSYQAIKHKLADVH 236
+RA +FG LA +AQL+GAGQALL+ AV YAKQR+QFGR IGSYQA+KHKLADVH
Sbjct 173 GISLDTSRAIDFGVLAISAQLIGAGQALLDRAVAYAKQRSQFGRPIGSYQAVKHKLADVH 232
Query 237 IAIELACPLVYGAAVSLEP------RDVSAAKAAASEAALLAARWALQTHGAIGFTCEHD 290
IA+ELA PLVYGAA+SL RD SAAK AA++AA LAAR ALQTHGAIGFT E+D
Sbjct 233 IALELARPLVYGAALSLADQSPTAARDASAAKVAAAKAAYLAARSALQTHGAIGFTAEYD 292
Query 291 LSLWLLRVQALHSAWGTPQEHRRRVLEAL 319
LSLW+L+V+AL SAWGT + HR RVLEAL
Sbjct 293 LSLWILKVRALTSAWGTSEWHRARVLEAL 321
>gi|226304376|ref|YP_002764334.1| acyl-CoA dehydrogenase [Rhodococcus erythropolis PR4]
gi|226183491|dbj|BAH31595.1| putative acyl-CoA dehydrogenase [Rhodococcus erythropolis PR4]
Length=321
Score = 340 bits (872), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 185/323 (58%), Positives = 228/323 (71%), Gaps = 11/323 (3%)
Query 3 MEFALNEQQRDFAASIDAALGAADLPGVVRAWAAGDVAPGRKVWQQLANLGVTALGVAEK 62
M FAL+ +DFAASIDA L +D+P V+R+W GD PG+K+WQ+LA GV L ++E+
Sbjct 1 MRFALDSSHQDFAASIDALLTKSDMPSVIRSWNDGDTEPGKKLWQRLAETGVNGLVISEE 60
Query 63 FDGLGASPVDLVVALERLGRWCVPGPVTESIAVAPILLAHDDQAERSHGLASGELIATVA 122
DGLGA VDLVVALE+LGR VPGPV E+IAVAP LLA ER LA G L ATVA
Sbjct 61 HDGLGADAVDLVVALEQLGRHAVPGPVVETIAVAPTLLA-SVAPERLSALAEGSL-ATVA 118
Query 123 MPPRVPRAVDADTAGLVLLAGDGSVTEGTPGDCHRSVDPSRRLYEVAASGQAWRAPKDVV 182
PPR P A+DA+ LVLLA DG+V+ G PG+ SVD SR+LYEV+A A
Sbjct 119 APPRTPFALDANAVDLVLLAQDGTVSLGVPGEAKASVDLSRKLYEVSAGESLGSAD---F 175
Query 183 ARAYEFGALATAAQLVGAGQALLEAAVNYAKQRTQFGRAIGSYQAIKHKLADVHIAIELA 242
+ A++ GALATAAQL G GQ LLE YAKQR QFG+ IG +QA+KH LA+V +++E+A
Sbjct 176 SAAFDMGALATAAQLQGLGQTLLEVTTEYAKQRKQFGKVIGQFQAMKHHLAEVAVSLEMA 235
Query 243 CPLVYGAAVSLE------PRDVSAAKAAASEAALLAARWALQTHGAIGFTCEHDLSLWLL 296
PL++GAA+S+ RD+SAAK A +AA AAR LQ HGAIG+T EHDLSLWL
Sbjct 236 RPLLHGAALSVRDQSADASRDISAAKVACGDAAYKAARVGLQVHGAIGYTMEHDLSLWLT 295
Query 297 RVQALHSAWGTPQEHRRRVLEAL 319
+V+AL +AWGTP EHR RV+EAL
Sbjct 296 KVRALLTAWGTPSEHRARVVEAL 318
>gi|229494542|ref|ZP_04388305.1| Acyl-CoA dehydrogenase domain protein [Rhodococcus erythropolis
SK121]
gi|229318904|gb|EEN84762.1| Acyl-CoA dehydrogenase domain protein [Rhodococcus erythropolis
SK121]
Length=321
Score = 338 bits (867), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 185/323 (58%), Positives = 227/323 (71%), Gaps = 11/323 (3%)
Query 3 MEFALNEQQRDFAASIDAALGAADLPGVVRAWAAGDVAPGRKVWQQLANLGVTALGVAEK 62
M FAL+ +DFAASIDA L +D+P V+R+W GD PG+K+WQ+LA GV L ++E+
Sbjct 1 MRFALDSSHQDFAASIDALLTKSDMPAVIRSWNDGDTEPGKKLWQRLAETGVNGLVISEE 60
Query 63 FDGLGASPVDLVVALERLGRWCVPGPVTESIAVAPILLAHDDQAERSHGLASGELIATVA 122
DGLGA VDLVVALE+LGR VPGPV E+IAVAP LLA ER LA G L ATVA
Sbjct 61 HDGLGADAVDLVVALEQLGRHAVPGPVVETIAVAPTLLA-SVAPERLSALAEGSL-ATVA 118
Query 123 MPPRVPRAVDADTAGLVLLAGDGSVTEGTPGDCHRSVDPSRRLYEVAASGQAWRAPKDVV 182
PP P A+DAD LVLLA DG+V+ G PG+ SVD SR+LYEV+A A
Sbjct 119 APPHTPFALDADAVDLVLLAQDGAVSLGVPGEAKASVDLSRKLYEVSAGESLGSAD---F 175
Query 183 ARAYEFGALATAAQLVGAGQALLEAAVNYAKQRTQFGRAIGSYQAIKHKLADVHIAIELA 242
+ A++ GALATAAQL G GQ LLE YAKQR QFG+ IG +QA+KH LA+V +++E+A
Sbjct 176 SAAFDMGALATAAQLQGLGQTLLEVTTEYAKQRKQFGKVIGQFQAMKHHLAEVAVSLEMA 235
Query 243 CPLVYGAAVSLE------PRDVSAAKAAASEAALLAARWALQTHGAIGFTCEHDLSLWLL 296
PL++GAA+S+ RD+SAAK A +AA AAR LQ HGAIG+T EHDLSLWL
Sbjct 236 RPLLHGAALSVRDQSADASRDISAAKVACGDAAYKAARVGLQVHGAIGYTMEHDLSLWLT 295
Query 297 RVQALHSAWGTPQEHRRRVLEAL 319
+V+AL +AWGTP EHR RV+EAL
Sbjct 296 KVRALLTAWGTPSEHRARVVEAL 318
>gi|333992359|ref|YP_004524973.1| acyl-CoA dehydrogenase [Mycobacterium sp. JDM601]
gi|333488327|gb|AEF37719.1| acyl-CoA dehydrogenase FadE32 [Mycobacterium sp. JDM601]
Length=321
Score = 336 bits (862), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 219/324 (68%), Positives = 250/324 (78%), Gaps = 10/324 (3%)
Query 3 MEFALNEQQRDFAASIDAALGAADLPGVVRAWAAGDVAPGRKVWQQLANLGVTALGVAEK 62
M+F L++ QRDFAASIDAAL AAD+PG VRAW+ G+ GR+VW QLA LGVTAL V E+
Sbjct 1 MKFDLDQDQRDFAASIDAALAAADVPGAVRAWSHGEPDAGRRVWNQLAELGVTALAVPEE 60
Query 63 FDGLGASPVDLVVALERLGRWCVPGPVTESIAVAPILLA-HDDQAERSHGLASGELIATV 121
DG+GA PVDL++A+E LGRWCVPGPV ESIAVAP+LLA D A + LA+GELIATV
Sbjct 61 HDGIGAHPVDLMLAIEALGRWCVPGPVVESIAVAPVLLAGAPDAAAQLAALAAGELIATV 120
Query 122 AMPPRVPRAVDADTAGLVLLAGDGSVTEGTPGDCHRSVDPSRRLYEVAASGQAWRAPKDV 181
A+PP PRA+DAD A LVL A G G H SVDPSR +++V A+G +W A
Sbjct 121 ALPPHTPRALDADRADLVLHAESGRAGTAQAGTRHASVDPSRGVFDVTATGDSWDAD--- 177
Query 182 VARAYEFGALATAAQLVGAGQALLEAAVNYAKQRTQFGRAIGSYQAIKHKLADVHIAIEL 241
ARAYE GALATAAQL+GAGQA+L A+V+YAKQRTQFGR IG YQAIKHKLADVHIA+EL
Sbjct 178 TARAYEVGALATAAQLIGAGQAMLNASVDYAKQRTQFGRVIGGYQAIKHKLADVHIALEL 237
Query 242 ACPLVYGAAVSLEP------RDVSAAKAAASEAALLAARWALQTHGAIGFTCEHDLSLWL 295
A PLVYGAA+SL RDVSAAK AAS+AALLAA ALQTHGAIGFT E DLSLWL
Sbjct 238 ARPLVYGAALSLSQDSADTARDVSAAKVAASDAALLAAHSALQTHGAIGFTSECDLSLWL 297
Query 296 LRVQALHSAWGTPQEHRRRVLEAL 319
LRVQA+ AWG HRRRVLEA+
Sbjct 298 LRVQAVRPAWGDVTAHRRRVLEAI 321
>gi|226363947|ref|YP_002781729.1| acyl-CoA dehydrogenase [Rhodococcus opacus B4]
gi|226242436|dbj|BAH52784.1| putative acyl-CoA dehydrogenase [Rhodococcus opacus B4]
Length=322
Score = 318 bits (815), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 179/323 (56%), Positives = 223/323 (70%), Gaps = 11/323 (3%)
Query 3 MEFALNEQQRDFAASIDAALGAADLPGVVRAWAAGDVAPGRKVWQQLANLGVTALGVAEK 62
M F L+ +DFA+SIDA L AD+P V+R+W GD G KVWQ+LA GV L +A++
Sbjct 1 MRFTLDSSHQDFASSIDALLSKADMPSVIRSWNTGDTGAGLKVWQRLAETGVNGLLIADE 60
Query 63 FDGLGASPVDLVVALERLGRWCVPGPVTESIAVAPILLAHDDQAERSHGLASGELIATVA 122
DGLGA VDLVVA+E+LGR VPGPV E++AVAP LLA +R LASG L ATVA
Sbjct 61 HDGLGADAVDLVVAVEQLGRHAVPGPVAETVAVAPALLAQ-VAPDRLSALASGSL-ATVA 118
Query 123 MPPRVPRAVDADTAGLVLLAGDGSVTEGTPGDCHRSVDPSRRLYEVAASGQAWRAPKDVV 182
PP VP AVDAD+ LVLL +V+ G PG SVD SRRL+ + A+ A D
Sbjct 119 APPHVPFAVDADSVDLVLLVDGSTVSIGAPGAVQNSVDQSRRLFPLTATDVLGDA--DFT 176
Query 183 ARAYEFGALATAAQLVGAGQALLEAAVNYAKQRTQFGRAIGSYQAIKHKLADVHIAIELA 242
A A++ GALATAAQL G GQ LL+ +YAKQR QFG+ IG +QAIKH LA+V + +E++
Sbjct 177 A-AFDLGALATAAQLQGLGQTLLDVTTDYAKQRKQFGKVIGQFQAIKHHLAEVAVGLEMS 235
Query 243 CPLVYGAAVSL------EPRDVSAAKAAASEAALLAARWALQTHGAIGFTCEHDLSLWLL 296
PL++GAA+++ RDVSAAK A +AA AAR ALQ HGAIG+T EHDLSLWL
Sbjct 236 RPLLHGAALAVRDGSADSSRDVSAAKVACGDAAYRAARVALQVHGAIGYTQEHDLSLWLT 295
Query 297 RVQALHSAWGTPQEHRRRVLEAL 319
+V+AL +AWGTP HR RV++AL
Sbjct 296 KVRALVTAWGTPAFHRGRVVDAL 318
>gi|111021564|ref|YP_704536.1| acyl-CoA dehydrogenase [Rhodococcus jostii RHA1]
gi|110821094|gb|ABG96378.1| probable acyl-CoA dehydrogenase [Rhodococcus jostii RHA1]
Length=322
Score = 318 bits (814), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 182/326 (56%), Positives = 223/326 (69%), Gaps = 17/326 (5%)
Query 3 MEFALNEQQRDFAASIDAALGAADLPGVVRAWAAGDVAPGRKVWQQLANLGVTALGVAEK 62
M F L+ +DFA+SIDA L AD+P V+R+W GD PG KVWQ+LA GV L VA++
Sbjct 1 MRFTLDSSHQDFASSIDALLSKADMPAVIRSWNTGDTGPGLKVWQRLAETGVNGLLVADE 60
Query 63 FDGLGASPVDLVVALERLGRWCVPGPVTESIAVAPILLAHDDQAERSHGLASGELIATVA 122
DGLGA VDLVVA+E+LGR VPGPV E++AVAP LLA +R LASG L ATVA
Sbjct 61 HDGLGADAVDLVVAVEQLGRHAVPGPVAETVAVAPALLAQVG-PDRLAALASGSL-ATVA 118
Query 123 MPPRVPRAVDADTAGLVLLAGDGSVTEGTPGDCHRSVDPSRRLYEVAAS---GQAWRAPK 179
P VP AVDAD+A LVLL +V+ G G SVD SRRLY + A G A AP
Sbjct 119 AAPHVPFAVDADSADLVLLVDGATVSLGQAGAVQNSVDQSRRLYPLTAGDAFGDADFAP- 177
Query 180 DVVARAYEFGALATAAQLVGAGQALLEAAVNYAKQRTQFGRAIGSYQAIKHKLADVHIAI 239
A++ GALATAAQL G GQ LL+ +YAKQR QFG+ IG +QAIKH LA+V + +
Sbjct 178 -----AFDLGALATAAQLQGLGQTLLDVTTDYAKQRKQFGKVIGQFQAIKHHLAEVAVGL 232
Query 240 ELACPLVYGAAVSL------EPRDVSAAKAAASEAALLAARWALQTHGAIGFTCEHDLSL 293
E++ PL++GAA+S+ RDVSAAK A +AA AAR ALQ HGAIG+T EHDLSL
Sbjct 233 EMSRPLLHGAALSVRDGSVDSSRDVSAAKVACGDAAYRAARVALQVHGAIGYTQEHDLSL 292
Query 294 WLLRVQALHSAWGTPQEHRRRVLEAL 319
WL +V+AL +AWGTP HR RV+++L
Sbjct 293 WLTKVRALVTAWGTPAYHRGRVVDSL 318
>gi|302528337|ref|ZP_07280679.1| acyl-CoA dehydrogenase domain-containing protein [Streptomyces
sp. AA4]
gi|302437232|gb|EFL09048.1| acyl-CoA dehydrogenase domain-containing protein [Streptomyces
sp. AA4]
Length=317
Score = 280 bits (717), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 169/317 (54%), Positives = 207/317 (66%), Gaps = 4/317 (1%)
Query 3 MEFALNEQQRDFAASIDAALGAADLPGVVRAWAAGDVAPGRKVWQQLANLGVTALGVAEK 62
M+F L+ +QR FA ++DA LGAAD+PGV R+WAA PG K+W+QLA LGVTALGV E
Sbjct 1 MKFRLSAEQRAFAEALDALLGAADVPGVTRSWAAKRPEPGLKLWKQLAELGVTALGVPED 60
Query 63 FDGLGASPVDLVVALERLGRWCVPGPVTESIAVAPILLAHDDQAERSHGLASGELIATVA 122
G+G + VDL+VA ERLG VPGPV ESIA AP L+ A LASG+ +AT A
Sbjct 61 HGGVGGTAVDLIVAFERLGYHGVPGPVIESIAAAPALVT---DASLLSALASGDAVATFA 117
Query 123 MPPRVPRAVDADTAGLVLLAGDGSVTEGTPGDCHRSVDPSRRLYEVAASGQAWRAPKDVV 182
P P A+DAD A V + GD S+ G +SVDPSR L+EV A + +
Sbjct 118 SAPDTPYALDADVATDVFVVGD-SLARAEIGRSRQSVDPSRHLFEVTAGAEVQPLSPEKR 176
Query 183 ARAYEFGALATAAQLVGAGQALLEAAVNYAKQRTQFGRAIGSYQAIKHKLADVHIAIELA 242
A A + +LA AA+L+G G+ +L V Y QR QFGR IG YQA+KH ADV +A++ A
Sbjct 177 AAALDLASLACAAELLGCGERMLADTVAYLGQRRQFGRVIGEYQALKHAAADVRVALDFA 236
Query 243 CPLVYGAAVSLEPRDVSAAKAAASEAALLAARWALQTHGAIGFTCEHDLSLWLLRVQALH 302
PL+ GAA R +SAAK A S+AA LAAR LQ HGAIG+T E DLSLWLLRV+AL
Sbjct 237 RPLLLGAAREPSARAISAAKVATSDAAQLAARTGLQLHGAIGYTLECDLSLWLLRVRALV 296
Query 303 SAWGTPQEHRRRVLEAL 319
WGTP HR RVLE+L
Sbjct 297 GCWGTPAGHRARVLESL 313
>gi|312138165|ref|YP_004005501.1| acyl-CoA dehydrogenase [Rhodococcus equi 103S]
gi|311887504|emb|CBH46816.1| putative acyl-CoA dehydrogenase [Rhodococcus equi 103S]
Length=328
Score = 266 bits (681), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 161/329 (49%), Positives = 210/329 (64%), Gaps = 13/329 (3%)
Query 3 MEFALNEQQRDFAASIDAALGAADLPGVVRAWAAGDVAPGRKVWQQLANLGVTALGVAEK 62
M+F+L+ +QRDFA S+ L A+ P VVR+W D A G + QQLA GVTAL V E+
Sbjct 1 MKFSLSTEQRDFAESLRGLLANANTPAVVRSWGENDTAAGLALLQQLAETGVTALAVPEE 60
Query 63 FDGLGASPVDLVVALERLGRWCVPGPVTESIAVAPILLA--HDDQAERSH--GLASGELI 118
FDG+GA P DL VA LGR VPGPV E+ A P LL+ +D Q + G+A G L
Sbjct 61 FDGIGAHPADLAVAFIELGRAAVPGPVLETAAAVPALLSALNDQQLAKRFLPGIAEGNL- 119
Query 119 ATVAMPPRVPRAVDADTAGLVLLAGDGSVTEGTPGDCHRSVDPSRRLYEVAA--SGQAWR 176
A++ + P PRA+DAD A VL ++ P SVDP+RRL+EV + +
Sbjct 120 ASLVLEPSTPRALDADVAEPVLRVSGDTLELVRPTTQLESVDPARRLFEVESVETLAQGA 179
Query 177 APKDVVARAYEFGALATAAQLVGAGQALLEAAVNYAKQRTQFGRAIGSYQAIKHKLADVH 236
+AY+ LA +AQL+GAG A++E A +YAK R+QFGR IGS+QA+KH ++D
Sbjct 180 DVAAAAEKAYDLAVLAASAQLIGAGHAMIETATDYAKNRSQFGRVIGSFQAVKHHMSDAL 239
Query 237 IAIELACPLVYGAAVSLEP------RDVSAAKAAASEAALLAARWALQTHGAIGFTCEHD 290
+A+E+A PLVYGAA+S+ RDVSAAK AA+ AA +A+R ALQ HGAIG+T E D
Sbjct 240 VAVEMATPLVYGAAISIAEGSDTIARDVSAAKVAAANAAYVASRKALQVHGAIGYTLECD 299
Query 291 LSLWLLRVQALHSAWGTPQEHRRRVLEAL 319
LSLWL + +AL SAWGT HR R+ AL
Sbjct 300 LSLWLTKTRALQSAWGTASAHRARIASAL 328
>gi|325674931|ref|ZP_08154618.1| acyl-CoA dehydrogenase [Rhodococcus equi ATCC 33707]
gi|325554517|gb|EGD24192.1| acyl-CoA dehydrogenase [Rhodococcus equi ATCC 33707]
Length=328
Score = 263 bits (672), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 160/329 (49%), Positives = 209/329 (64%), Gaps = 13/329 (3%)
Query 3 MEFALNEQQRDFAASIDAALGAADLPGVVRAWAAGDVAPGRKVWQQLANLGVTALGVAEK 62
M+F+L+ +QRDFA S+ L A+ P VVR+W D A G + QQLA GVTAL V E+
Sbjct 1 MKFSLSTEQRDFAESLRGLLANANTPAVVRSWGENDTAAGLALLQQLAETGVTALAVPEE 60
Query 63 FDGLGASPVDLVVALERLGRWCVPGPVTESIAVAPILLA--HDDQAERSH--GLASGELI 118
FDG+GA DL VA LGR VPGPV E+ A P LL+ +D Q + G+A G L
Sbjct 61 FDGIGAHQADLAVAFIELGRAAVPGPVLETAAAVPALLSALNDQQLAKRFLPGIAEGNL- 119
Query 119 ATVAMPPRVPRAVDADTAGLVLLAGDGSVTEGTPGDCHRSVDPSRRLYEVAA--SGQAWR 176
A++ + P PRA+DAD A VL ++ P SVDP+RRL+EV + +
Sbjct 120 ASLVLEPSTPRALDADVAEPVLRVSGDTLELVRPTTQLESVDPARRLFEVESVETLAQGA 179
Query 177 APKDVVARAYEFGALATAAQLVGAGQALLEAAVNYAKQRTQFGRAIGSYQAIKHKLADVH 236
+AY+ LA +AQL+GAG A++E A +YAK R+QFGR IGS+QA+KH ++D
Sbjct 180 DVAAAAEKAYDLAVLAASAQLIGAGHAMIETATDYAKNRSQFGRVIGSFQAVKHHMSDAL 239
Query 237 IAIELACPLVYGAAVSLEP------RDVSAAKAAASEAALLAARWALQTHGAIGFTCEHD 290
+A+E+A PLVYGAA+S+ RDVSAAK AA+ AA +A+R ALQ HGAIG+T E D
Sbjct 240 VAVEMATPLVYGAAISIAEGSDTIARDVSAAKVAAANAAYVASRKALQVHGAIGYTLECD 299
Query 291 LSLWLLRVQALHSAWGTPQEHRRRVLEAL 319
LSLWL + +AL SAWGT HR R+ AL
Sbjct 300 LSLWLTKTRALQSAWGTASAHRARIASAL 328
>gi|326328931|ref|ZP_08195262.1| putative acyl-CoA dehydrogenase [Nocardioidaceae bacterium Broad-1]
gi|325953274|gb|EGD45283.1| putative acyl-CoA dehydrogenase [Nocardioidaceae bacterium Broad-1]
Length=320
Score = 257 bits (656), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 170/323 (53%), Positives = 208/323 (65%), Gaps = 13/323 (4%)
Query 3 MEFALNEQQRDFAASIDAALGAADLPGVVRAWAAGDVAPGRKVWQQLANLGVTALGVAEK 62
M F +Q F+ ++D LGAAD+ RAWAA D + G K+WQ+LA LGVT L V E+
Sbjct 1 MRFGRTPEQHAFSEALDDLLGAADVSAASRAWAARDHSAGLKLWQRLAELGVTGLLVPEE 60
Query 63 FDGLGASPVDLVVALERLGRWCVPGPVTESIAVAPILLAHDDQAERSHGLASGELIATVA 122
GL AS VDL VA ERLG VPGP ES+A+AP LL AE LA GE A VA
Sbjct 61 DGGLSASAVDLTVAFERLGYHGVPGPWIESVALAPRLLPGTPDAELLARLAPGE--ALVA 118
Query 123 MPPRVPRAVDADTAGLVLLAGDGSVTEGTPGDCHRSVDPSRRLYEVAASGQAWRAPKDVV 182
+ P RA+DAD A G ++ PG SVDP+RRL+EV A + A D
Sbjct 119 VAPGT-RALDADVAERTYALG-ATLRRAEPGAERTSVDPTRRLFEVTAGEEI--ATID-P 173
Query 183 ARAYEFGALATAAQLVGAGQALLEAAVNYAKQRTQFGRAIGSYQAIKHKLADVHIAIELA 242
A A +FG LA +AQL+GAG LL+ +V Y KQRTQFGR IG +QA+KH LADV +A++ A
Sbjct 174 APALDFGTLACSAQLLGAGLRLLDDSVAYVKQRTQFGRRIGEFQAVKHLLADVRVALDFA 233
Query 243 CPLVYGAAVSLE------PRDVSAAKAAASEAALLAARWALQTHGAIGFTCEHDLSLWLL 296
PLV+ AAV L+ R VSAAK A +AA LA+R ALQ HGAIG+T E DLSLW+L
Sbjct 234 APLVHNAAVELDAEAPTAARAVSAAKVATGDAAYLASRTALQVHGAIGYTREFDLSLWIL 293
Query 297 RVQALHSAWGTPQEHRRRVLEAL 319
+V+AL AWGTP EHR R+LE+L
Sbjct 294 KVRALVGAWGTPAEHRARILESL 316
>gi|312197062|ref|YP_004017123.1| acyl-CoA dehydrogenase domain-containing protein [Frankia sp.
EuI1c]
gi|311228398|gb|ADP81253.1| acyl-CoA dehydrogenase domain-containing protein [Frankia sp.
EuI1c]
Length=328
Score = 254 bits (649), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 171/326 (53%), Positives = 214/326 (66%), Gaps = 14/326 (4%)
Query 3 MEFALNEQQRDFAASIDAALGAADLPGVVRAWAAGDVAPGRKVWQQLANLGVTALGVAEK 62
M F +Q D+AAS+ L A D P + RAWAAGD APGR +W++LA+ GV ALG+ +
Sbjct 1 MRFQPQPEQLDYAASLRDFLAAQDTPSIARAWAAGDPAPGRALWRKLADQGVLALGLPPE 60
Query 63 FDGLGASPVDLVVALERLGRWCVPGPVTESIAVAPILLAHDDQAERSHGLASGELIATVA 122
G+ A+PVDLV+A E+LGR VPGP ES+AV P+LLA A+R + +G L+ATVA
Sbjct 61 HGGVDATPVDLVLAFEQLGRAAVPGPYVESVAVLPMLLAGTPAADRLEPIGAGSLVATVA 120
Query 123 MPPRVPRAVDADTAGLVLLAGDGSVTEGTPGDCHRSVDPSRRLYEVAASGQAWRAPKDVV 182
+PPRVP AVDA A + + G + SVDPSRRL V A P V
Sbjct 121 LPPRVPYAVDAAAADVSFVVTAGGLAYARVTGGRDSVDPSRRLGVVEAG-----EPLGAV 175
Query 183 --ARAYEFGALATAAQLVGAGQALLEAAVNYAKQRTQFGRAIGSYQAIKHKLADVHIAIE 240
A A++ GALATAA L+GAG ALLE V+YAK R QFG IGS+QA+KH+LADV +A+E
Sbjct 176 DPAAAFDRGALATAAYLLGAGAALLEQTVDYAKLRRQFGAPIGSFQAVKHQLADVAVALE 235
Query 241 LACPLVYGAAVSLE-------PRDVSAAKAAASEAALLAARWALQTHGAIGFTCEHDLSL 293
A PL+ GAA+++ RDVSAA A + A LAAR ALQ HGAIG+T EH LS+
Sbjct 236 FARPLLSGAALAVAGPGGPTVGRDVSAAWVACATGAHLAARTALQVHGAIGYTAEHTLSV 295
Query 294 WLLRVQALHSAWGTPQEHRRRVLEAL 319
WLL+V+AL SAWGT + HR RV AL
Sbjct 296 WLLKVRALLSAWGTHRLHRGRVWAAL 321
>gi|311744281|ref|ZP_07718085.1| acyl-CoA dehydrogenase [Aeromicrobium marinum DSM 15272]
gi|311312454|gb|EFQ82367.1| acyl-CoA dehydrogenase [Aeromicrobium marinum DSM 15272]
Length=305
Score = 252 bits (643), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 155/317 (49%), Positives = 194/317 (62%), Gaps = 19/317 (5%)
Query 3 MEFALNEQQRDFAASIDAALGAADLPGVVRAWAAGDVAPGRKVWQQLANLGVTALGVAEK 62
M F +Q FA S+D L +D RAWA G+ PG +W++LA+LGVT+L
Sbjct 1 MRFTPTTEQTGFARSLDDLLTRSDTVAANRAWARGEHGPGLGLWKRLADLGVTSLATE-- 58
Query 63 FDGLGASPVDLVVALERLGRWCVPGPVTESIAVAPILLAHDDQAERSHGLASGELIATVA 122
A+PV++ +A E LGR VPGP ES A P+ L D + IATVA
Sbjct 59 -----ATPVEVRIAFEALGRHAVPGPWVESAAYLPVALPDVDLTD---------TIATVA 104
Query 123 MPPRVPRAVDADTAGLVLLAGDGSVTEGTPGDCHRSVDPSRRLYEVAASGQAWRAPKDVV 182
+ P VP A+DAD A V + G+++ T G SVDPSRRL EV A D
Sbjct 105 VLPHVPYALDADVADTVYVVTGGALSTATAGAPVTSVDPSRRLVEVVAGDPVDHGDLD-- 162
Query 183 ARAYEFGALATAAQLVGAGQALLEAAVNYAKQRTQFGRAIGSYQAIKHKLADVHIAIELA 242
RA++ A ATAAQL+GAG+ +L +V Y QRTQFGR IGSYQAIKH+LADV +A++ A
Sbjct 163 -RAFDLAAFATAAQLLGAGERVLADSVAYVSQRTQFGRTIGSYQAIKHQLADVRVALDFA 221
Query 243 CPLVYGAAVSLEPRDVSAAKAAASEAALLAARWALQTHGAIGFTCEHDLSLWLLRVQALH 302
PL+ GA V L PR VSAA ++AA LAAR LQ HGAIG+T E+DLS WLLR++AL
Sbjct 222 RPLLDGAGVELTPRSVSAAAIQCADAARLAARVGLQVHGAIGYTQEYDLSRWLLRIRALQ 281
Query 303 SAWGTPQEHRRRVLEAL 319
SAWGTP HR R+L L
Sbjct 282 SAWGTPAWHRERLLADL 298
>gi|333918612|ref|YP_004492193.1| acyl-CoA dehydrogenase domain-containing protein [Amycolicicoccus
subflavus DQS3-9A1]
gi|333480833|gb|AEF39393.1| Acyl-CoA dehydrogenase domain protein [Amycolicicoccus subflavus
DQS3-9A1]
Length=328
Score = 251 bits (640), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 170/326 (53%), Positives = 212/326 (66%), Gaps = 12/326 (3%)
Query 3 MEFALNEQQRDFAASIDAALGAADLPGVVRAWAAGDVAPGRKVWQQLANLGVTALGVAEK 62
M+F+L+ + RDFAASI L +D+PG +R+W+AG+ PG K+WQ LANLGV+AL V+E+
Sbjct 1 MDFSLSTEHRDFAASIGHLLQTSDVPGAIRSWSAGEHGPGLKLWQGLANLGVSALAVSEE 60
Query 63 FDGLGASPVDLVVALERLGRWCVPGPVTESIAVAPILL-AHDDQAER-SHGLASGELIAT 120
+G GA VDL VA E LG + VPGP+ ES A P LL +HD AER +A GE +AT
Sbjct 61 HEGAGADAVDLTVAFEVLGYYAVPGPIVESFAAIPGLLRSHDALAERWLPAIARGESVAT 120
Query 121 VAMPPRVPRAVDADTAGLVLLAG-DGSVTEGTPGDCHRSVDPSRRLYEVAASGQAWRAPK 179
+AM P P A+DAD A L L+ G DG+V EG RSVD +RRL+ + GQ A
Sbjct 121 LAMLPHTPFALDADVADLRLVVGSDGAVIEGARSAPERSVDAARRLFRLEPHGQRAIADA 180
Query 180 DVVARAYEFGALATAAQLVGAGQALLEAAVNYAKQRTQFGRAIGSYQAIKHKLADVHIAI 239
A ALA+AAQL+G GQ +L+ V YAKQR Q+G+ IG YQAIKH LAD A+
Sbjct 181 GAAFDAA---ALASAAQLLGLGQRILDDTVAYAKQRHQYGKPIGQYQAIKHLLADCATAL 237
Query 240 ELACPLVYGAAVSLEP------RDVSAAKAAASEAALLAARWALQTHGAIGFTCEHDLSL 293
ELA PLV+GAAV++ RDVSAA+ AA+ AA AR LQ HGAIG+T EHDL
Sbjct 238 ELARPLVHGAAVAMTSGTATCARDVSAARVAAAAAAYRIARTGLQVHGAIGYTAEHDLGQ 297
Query 294 WLLRVQALHSAWGTPQEHRRRVLEAL 319
L +V AL WGT HR RVL A+
Sbjct 298 QLTKVFALQCIWGTQAFHRDRVLRAV 323
>gi|54022444|ref|YP_116686.1| putative acyl-CoA dehydrogenase [Nocardia farcinica IFM 10152]
gi|54013952|dbj|BAD55322.1| putative acyl-CoA dehydrogenase [Nocardia farcinica IFM 10152]
Length=342
Score = 251 bits (640), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 170/331 (52%), Positives = 205/331 (62%), Gaps = 17/331 (5%)
Query 3 MEFALNEQQRDFAASIDAALGAADLPGVVRAWAAGDVAPGRKVWQQLANLGVTALGVAEK 62
M FAL+ +Q DFAAS+ L A P VRAWAAGD PGR + QLA GV L + E
Sbjct 1 MRFALSPEQADFAASVRKLLDAGRTPAAVRAWAAGDREPGRALLGQLAEQGVLGLAIDED 60
Query 63 FDGLGASPVDLVVALERLGRWCVPGPVTESIAVAPILLA---HDDQAER-SHGLASGELI 118
G+GA P+DLVVA LGR PGP+ ES A P LL D A+R G+A G +
Sbjct 61 NGGMGAEPIDLVVAFVELGRAAAPGPLVESAAAIPALLQALPDADAAQRWLPGIAEGSAL 120
Query 119 ATVAMPPR-VPRAVDADTAGLVLLAGDGSVTEGTPGDCHRSVDPSRRLY-----EVAASG 172
AT++ A+DA+ A +V + VT G RSVDP+RRL E A G
Sbjct 121 ATISFESAGTTVALDAEAADVVFVVSGDRVTVGRATGEVRSVDPARRLSTVEPGETVAEG 180
Query 173 QAWRAPKDVVARAYEFGALATAAQLVGAGQALLEAAVNYAKQRTQFGRAIGSYQAIKHKL 232
+ RA VARA++ G LA AAQ +GAG+ALL AA YAKQR QFGR IG +QA+K KL
Sbjct 181 EPARA---AVARAFDAGVLACAAQQLGAGRALLHAATEYAKQRKQFGRPIGEFQAVKQKL 237
Query 233 ADVHIAIELACPLVYGAAVSL-EP---RDVSAAKAAASEAALLAARWALQTHGAIGFTCE 288
ADV IA++LA PL+Y AA++ EP RDVSAA A +AA AAR ALQ HGAIG+T E
Sbjct 238 ADVLIALDLAEPLLYRAALTFDEPSRERDVSAAAVACGDAAYTAARAALQVHGAIGYTAE 297
Query 289 HDLSLWLLRVQALHSAWGTPQEHRRRVLEAL 319
+DLSLWL +V AL SAWGT HR R+ AL
Sbjct 298 YDLSLWLTKVTALRSAWGTADVHRGRIARAL 328
>gi|300785285|ref|YP_003765576.1| acyl-CoA dehydrogenase [Amycolatopsis mediterranei U32]
gi|299794799|gb|ADJ45174.1| acyl-CoA dehydrogenase [Amycolatopsis mediterranei U32]
gi|340526728|gb|AEK41933.1| acyl-CoA dehydrogenase [Amycolatopsis mediterranei S699]
Length=305
Score = 250 bits (639), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 180/318 (57%), Positives = 214/318 (68%), Gaps = 16/318 (5%)
Query 3 MEFALNEQQRDFAASIDAALGAADLPGVVRAWAAGDVAPGRKVWQQLANLGVTALGVAEK 62
M F L+ +QR FAA++ LG AD RAWAAG+ G K+W+ LA++GV AL V E
Sbjct 1 MRFQLSPEQRQFAATLHELLGGADTAAAARAWAAGEHDRGLKLWRALADVGVFALLVDED 60
Query 63 FDGLGASPVDLVVALERLGRWCVPGPVTESIAVAPILLAHDDQAERSHGLASGELIATVA 122
GLGA PVDLVVA E LG VPGP+ ES AVAP LL R LA G+L+ATV
Sbjct 61 HGGLGAGPVDLVVACEALGYHAVPGPLVESAAVAPALL----TGHRLTSLAEGDLVATVV 116
Query 123 MPPRVPRAVDADTAGLVLLAGDGSVTEGTPGDCHRSVDPSRRLYEV-AASGQAWRAPKDV 181
PP VP A+DAD AG+VL S+T G + RS+DP RRL+ V AA+G++ D
Sbjct 117 APPEVPLALDADVAGMVLDLTGASLTAGA--EPVRSIDPPRRLFRVPAAAGRS-----DG 169
Query 182 VARAYEFGALATAAQLVGAGQALLEAAVNYAKQRTQFGRAIGSYQAIKHKLADVHIAIEL 241
V A++ G LA AAQL+GAGQ LL+ +V YAKQR Q+GRAIG YQAIKH LADV +EL
Sbjct 170 V--AFDRGVLAVAAQLLGAGQWLLDTSVAYAKQRKQYGRAIGEYQAIKHLLADVVTRLEL 227
Query 242 ACPLVYGAAVSLEP--RDVSAAKAAASEAALLAARWALQTHGAIGFTCEHDLSLWLLRVQ 299
A PL+YGAAV+ E RDVSAAK A +AALLAAR ALQ HGAIG+T EHDL L L +V+
Sbjct 228 ARPLLYGAAVAGETFARDVSAAKVMAGDAALLAARTALQVHGAIGYTAEHDLGLRLTKVR 287
Query 300 ALHSAWGTPQEHRRRVLE 317
AL AWGT HR RVL
Sbjct 288 ALAGAWGTGSFHRARVLR 305
>gi|296141510|ref|YP_003648753.1| acyl-CoA dehydrogenase domain-containing protein [Tsukamurella
paurometabola DSM 20162]
gi|296029644|gb|ADG80414.1| acyl-CoA dehydrogenase domain protein [Tsukamurella paurometabola
DSM 20162]
Length=334
Score = 244 bits (622), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 166/331 (51%), Positives = 202/331 (62%), Gaps = 18/331 (5%)
Query 3 MEFALNEQQRDFAASIDAALGAADLPGVVRAWAAGDVAPGRKVWQQLANLGVTALGVAEK 62
M FA +++ FAAS+ L A RAWAAGD +PGR +W LA+LGVT L + E
Sbjct 1 MRFAPSQENLAFAASLHDLLSGASTTAAARAWAAGDHSPGRTIWSALADLGVTGLAIDEG 60
Query 63 FDGLGASPVDLVVALERLGRWCVPGPVTESIAVAPILLAHDDQAERSHGLASGELIATVA 122
+DG+G P DL +ALE LG VPGPV ESIAV P LL + A LA G I TVA
Sbjct 61 YDGVGGDPADLAIALEALGYHGVPGPVVESIAVLPALLTGEQAARHLPALAGGA-IGTVA 119
Query 123 MPPRVPRAVDADTAGL-VLLAGDGSVTEGT-PGDCH-RSVDPSRRLYEVAASGQAWRAPK 179
+ PR +DAD + L +A DG V E P H RS+DP+RRL+ + G +
Sbjct 120 IAPRAAHLLDADASDLRFTVAADGRVAESVAPEGAHQRSIDPTRRLFVTSEPGAGSPGDR 179
Query 180 DVVARAYEFGALATAAQLVGAGQALLEAAVNYAKQRTQFGRAIGSYQAIKHKLADVHIAI 239
D RA G AAQ +GAG+ LL+ AV YAK R Q+G IG YQAIKH LADV +
Sbjct 180 D---RALLLGTFGVAAQTLGAGRRLLDEAVGYAKTRAQYGHLIGEYQAIKHLLADVATRL 236
Query 240 ELACPLVYGAAVSLE-----------PRDVSAAKAAASEAALLAARWALQTHGAIGFTCE 288
ELA PLV GAAV+L RDVSAA+ A+++AA LAAR ALQ HGAIG+T E
Sbjct 237 ELAAPLVRGAAVALSHSGSPGVGMDAARDVSAARVASADAANLAARTALQVHGAIGYTAE 296
Query 289 HDLSLWLLRVQALHSAWGTPQEHRRRVLEAL 319
HDL +WL +V+AL SAWGT EHR VL A+
Sbjct 297 HDLGIWLTKVRALRSAWGTQSEHRAVVLNAV 327
>gi|159038390|ref|YP_001537643.1| acyl-CoA dehydrogenase domain-containing protein [Salinispora
arenicola CNS-205]
gi|157917225|gb|ABV98652.1| acyl-CoA dehydrogenase domain protein [Salinispora arenicola
CNS-205]
Length=335
Score = 244 bits (622), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 166/329 (51%), Positives = 202/329 (62%), Gaps = 12/329 (3%)
Query 3 MEFALNEQQRDFAASIDAALGAADLPGVVRAWAAGDVAPGRKVWQQLANLGVTALGVAEK 62
M L+ +Q FAA + L AD+P V WAA D +PG+ VW+QLA+LGVT L V +
Sbjct 1 MRLTLSTEQEQFAAVLHTMLTEADIPTVAHRWAADDPSPGQLVWRQLADLGVTGLAVPTR 60
Query 63 FDGLGASPVDLVVALERLGRWCVPGPVTESIAVAPILLA--HDDQAERS--HGLASGELI 118
+ GL A P D+VVA E LG +PGPV ESIA P LL DD + LA+GEL+
Sbjct 61 WGGLAAHPADIVVACEELGHHALPGPVAESIAAIPTLLTALGDDALCETWLPRLATGELV 120
Query 119 ATVAMPPRVPRAVDADTAGLVLLAGDGSVTEGTPGDCHRSVDPSRRLYEVAASGQAWRAP 178
T+ +PP VP A DAD A LVL AG ++ G PG RSVD +RRL EV P
Sbjct 121 GTLTVPPHVPYATDADVAALVLRAGAQTLRLGVPGARLRSVDDTRRLTEVIDGALLADGP 180
Query 179 K--DVVARAYEFGALATAAQLVGAGQALLEAAVNYAKQRTQFGRAIGSYQAIKHKLADVH 236
VA A + GALA AAQL+GAG ALLEA+V YA QRTQFGR +G +QA+KH LADV
Sbjct 181 AVGSAVAHALDAGALACAAQLLGAGHALLEASVRYAGQRTQFGRPVGQFQAVKHMLADVA 240
Query 237 IAIELACPLVYGAA------VSLEPRDVSAAKAAASEAALLAARWALQTHGAIGFTCEHD 290
I +E A PL++ AA RDVSAAK A ++AA AAR ALQ HGAIG+ E
Sbjct 241 IGLEFARPLLFAAAVALADQTPTAARDVSAAKVACADAARRAARTALQVHGAIGYARESG 300
Query 291 LSLWLLRVQALHSAWGTPQEHRRRVLEAL 319
L WL R+ AL AWGT HR R++ A+
Sbjct 301 LDSWLTRIWALVRAWGTQSWHRGRIMAAV 329
>gi|119716994|ref|YP_923959.1| acyl-CoA dehydrogenase domain-containing protein [Nocardioides
sp. JS614]
gi|119537655|gb|ABL82272.1| acyl-CoA dehydrogenase domain protein [Nocardioides sp. JS614]
Length=289
Score = 243 bits (619), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 157/317 (50%), Positives = 197/317 (63%), Gaps = 30/317 (9%)
Query 3 MEFALNEQQRDFAASIDAALGAADLPGVVRAWAAGDVAPGRKVWQQLANLGVTALGVAEK 62
M F ++ QRD AA++++ LGAAD V RAWA GD PGRK+W +LA LGVT L
Sbjct 1 MRFVPDDDQRDLAAALESLLGAADTVAVARAWADGDHDPGRKLWARLAELGVTQLATE-- 58
Query 63 FDGLGASPVDLVVALERLGRWCVPGPVTESIAVAPILLAHDDQAERSHGLASGELIATVA 122
A+PV++ +A E LGR VPGP ES A PI L + IATVA
Sbjct 59 -----ATPVEVCLAFEALGRHAVPGPWVESAAYLPIALGQEVDG-----------IATVA 102
Query 123 MPPRVPRAVDADTAGLVLLAGDGSVTEGTPGDCHRSVDPSRRLYEVAASGQAWRAPKDVV 182
+PP VP A+DAD A V + G+ + G+ SVD +R L+ V SG+ A
Sbjct 103 LPPVVPYALDADIADRVYV---GTTPAESVGEEVGSVDRTRHLFPVTGSGETDEA----- 154
Query 183 ARAYEFGALATAAQLVGAGQALLEAAVNYAKQRTQFGRAIGSYQAIKHKLADVHIAIELA 242
A+E LATAAQL+GAG+ +L V YAKQR QFGR IGSYQAIKH LADV IA++ A
Sbjct 155 --AFELAVLATAAQLLGAGERILADTVAYAKQRRQFGREIGSYQAIKHALADVRIALDFA 212
Query 243 CPLVYGAAVSLEPRDVSAAKAAASEAALLAARWALQTHGAIGFTCEHDLSLWLLRVQALH 302
PLV GAA+ P +AAK A ++AA L++R LQ HGA+G+T E DLSLWL +V+AL
Sbjct 213 RPLVLGAALGEVP--AAAAKVACADAAYLSSRTGLQVHGAVGYTQELDLSLWLTKVRALV 270
Query 303 SAWGTPQEHRRRVLEAL 319
+AWGTP HR R+LE L
Sbjct 271 TAWGTPAFHRARLLEGL 287
>gi|343925879|ref|ZP_08765394.1| putative acyl-CoA dehydrogenase [Gordonia alkanivorans NBRC 16433]
gi|343764230|dbj|GAA12320.1| putative acyl-CoA dehydrogenase [Gordonia alkanivorans NBRC 16433]
Length=322
Score = 241 bits (614), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 158/328 (49%), Positives = 207/328 (64%), Gaps = 17/328 (5%)
Query 3 MEFALNEQQRDFAASIDAALGAADLPGVVRAWAAGDVAPGRKVWQQLANLGVTALGVAEK 62
M+F L++ D AA++DA LG AD+P RAWAAGD KV+ QLA+ G++ L + E
Sbjct 1 MDFQLSDIHTDLAATVDAMLGKADMPAAARAWAAGDRTAVTKVYSQLADAGISGLLIDES 60
Query 63 FDGLGASPVDLVVALERLGRWCVPGPVTESIAVAPILLAHDDQAERSHGLASGELIATVA 122
G A V+++VA+E+LGR C PGP+ ES+AV PILL D LA G L AT A
Sbjct 61 HGGSSAGAVEMIVAVEQLGRHCAPGPIVESVAVLPILLRDADVNGPLQDLAEGRL-ATCA 119
Query 123 MPPRVPRAVDADTAGLVLLAGDGSVTEGTPGDCHRSVDPSRRLYEVAASGQAWRA--PKD 180
+ P P A D D+A V + DG ++ T SVD +R L VA P D
Sbjct 120 IAPLQPLAPDVDSAD-VYVVEDGVLSTATVLSTEPSVDTTRTLSRVAPDKTLATGIDPSD 178
Query 181 VVARAYEFGALATAAQLVGAGQALLEAAVNYAKQRTQFGRAIGSYQAIKHKLADVHIAIE 240
V + GALATAA+L+G GQA+L A YA+ R QFGR IGS+QA+KH LADV IA+E
Sbjct 179 AV----DAGALATAAELLGLGQAMLALASEYAQTRKQFGRPIGSFQAVKHHLADVAIALE 234
Query 241 LACPLVYGAAVSLE---------PRDVSAAKAAASEAALLAARWALQTHGAIGFTCEHDL 291
+A PLV+ AA+ ++ RDVSAAK AA++AA L+AR +LQ GAIG+T EHD+
Sbjct 235 MARPLVHAAALGIDGQVPEDTNVSRDVSAAKVAAADAAHLSARRSLQVLGAIGYTAEHDI 294
Query 292 SLWLLRVQALHSAWGTPQEHRRRVLEAL 319
SL++ + +AL SAWG+P HRRR+LE L
Sbjct 295 SLYITKTRALLSAWGSPAVHRRRILETL 322
>gi|288922889|ref|ZP_06417052.1| acyl-CoA dehydrogenase domain protein [Frankia sp. EUN1f]
gi|288345780|gb|EFC80146.1| acyl-CoA dehydrogenase domain protein [Frankia sp. EUN1f]
Length=364
Score = 238 bits (607), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 164/355 (47%), Positives = 205/355 (58%), Gaps = 38/355 (10%)
Query 3 MEFALNEQQRDFAASIDAALGAADLPGVVRAWAAGDVAPGRKVWQQLANLGVTALGVAEK 62
M F+L+ +QR FAA++D L A+D+P RAWA GD PG +W++LA LGVTAL V +
Sbjct 1 MRFSLSPEQRAFAAALDDLLTASDVPAAHRAWAGGDTDPGIALWKRLAKLGVTALAVPPE 60
Query 63 FDGLGASPVDLVVALERLGRWCVPGPVTESIAVAPILLAHDDQAERSHGLASGELIATVA 122
GLG SP+DL VA ERLG VPGP E++A+APILL A +A G T A
Sbjct 61 HGGLGGSPLDLAVAFERLGYHAVPGPWVETVALAPILLRATADAHLLPEIADGATRVTFA 120
Query 123 MPPRVPRAVDADTAGLVLLAGDGSVTE------------------------GTPGDCHRS 158
+PP VP AVD D L D + + G PG+ RS
Sbjct 121 LPPTVPYAVDCDVTAHAYLVDDAHLVDDAHLVDDAHLDDRVDSVAGRALLRGQPGEALRS 180
Query 159 VDPSRRLYEVAASGQAWRAPKDVVARAYEFGALATAAQLVGAGQALLEAAVNYAKQRTQF 218
VDP+RRL+ + +D V + ALA AA LVGAG+ LL +V Y R QF
Sbjct 181 VDPARRLHVLTGGTPIAGLSEDTVRAGLDRAALAAAAILVGAGERLLAESVQYVGARRQF 240
Query 219 GRAIGSYQAIKHKLADVHIAIELACPLVYGAAVSL--------------EPRDVSAAKAA 264
GRA+G YQA+KH LADV + ++ A PL++GAA+ L RDVSAAK
Sbjct 241 GRAVGEYQAVKHALADVRVGLDFARPLLHGAALELAADTTGAAGVGVATAARDVSAAKVL 300
Query 265 ASEAALLAARWALQTHGAIGFTCEHDLSLWLLRVQALHSAWGTPQEHRRRVLEAL 319
AS AAL AAR ALQ HGAIG+T E DLS+W+L V+AL AWGTP +HR RVL +L
Sbjct 301 ASTAALRAARTALQVHGAIGYTLECDLSIWILGVRALVGAWGTPADHRARVLRSL 355
>gi|319947751|ref|ZP_08021957.1| acyl-CoA dehydrogenase [Dietzia cinnamea P4]
gi|319438601|gb|EFV93515.1| acyl-CoA dehydrogenase [Dietzia cinnamea P4]
Length=341
Score = 234 bits (598), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 150/330 (46%), Positives = 201/330 (61%), Gaps = 17/330 (5%)
Query 3 MEFALNEQQRDFAASIDAALGAADLPGVVRAWAAGDVAPGRKVWQQLANLGVTALGVAEK 62
M+FAL+ + DFA SID+ L +D+P V+R+WA GD APG VW ++A G AL V E
Sbjct 1 MQFALDPEIIDFAGSIDSLLAKSDMPAVIRSWADGDTAPGTAVWGRVAETGAAALLVDEA 60
Query 63 FDGLGASPVDLVVALERLGRWCVPGPVTESIAVAPIL---LAHDDQAERSHGLASGELIA 119
G GA+ V+ V ALE LGR VPGPV E++ VAP + L D A G +G +A
Sbjct 61 SGGAGATAVEAVAALEILGRHAVPGPVVETVMVAPRIAAALGGDSNAGDVAGEIAGGALA 120
Query 120 TVAMPPRVPRAVDADTAGLVLLAGDGSVTEGTPGDCHRSVDPSRRLYEVAASGQAWR-AP 178
+VA P P A D A + D V G+ RSVD +R + A +A +
Sbjct 121 SVAAPGVSPFAPDPHVAQYLWAVSDDEVFTAEAGETRRSVDRARTVAAPTAGARAAAVST 180
Query 179 KDVVARAYEFGALATAAQLVGAGQALLEAAVNYAKQRTQFGRAIGSYQAIKHKLADVHIA 238
D++ GAL TAAQL G GQA+L +V+YAKQR Q+G+ IG YQA+KH+LA+V IA
Sbjct 181 TDLI----NHGALGTAAQLQGLGQAMLTMSVDYAKQRKQYGKLIGEYQALKHQLAEVAIA 236
Query 239 IELACPLVYGAAVSL--EPRDVSAA-------KAAASEAALLAARWALQTHGAIGFTCEH 289
+E+A PL++ A+++ P D AA + A ++AA L+AR ALQ HGAIG+T EH
Sbjct 237 LEMARPLLWAGALAIAENPGDPGAAVRDVSAARVAVADAAYLSARTALQVHGAIGYTLEH 296
Query 290 DLSLWLLRVQALHSAWGTPQEHRRRVLEAL 319
DL LWL + +AL +AWGT HR RVL++L
Sbjct 297 DLGLWLTKTRALQTAWGTQSYHRGRVLDSL 326
>gi|262200924|ref|YP_003272132.1| acyl-CoA dehydrogenase domain-containing protein [Gordonia bronchialis
DSM 43247]
gi|262084271|gb|ACY20239.1| acyl-CoA dehydrogenase domain protein [Gordonia bronchialis DSM
43247]
Length=325
Score = 233 bits (593), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 152/326 (47%), Positives = 200/326 (62%), Gaps = 11/326 (3%)
Query 3 MEFALNEQQRDFAASIDAALGAADLPGVVRAWAAGDVAPGRKVWQQLANLGVTALGVAEK 62
MEF L++ D AA+IDA LG AD+P RAW +GD KV+ QLA+ GV L + E
Sbjct 1 MEFLLSDIHDDLAATIDAMLGKADIPTAARAWTSGDRTAMAKVYAQLADAGVCGLLIDES 60
Query 63 FDGLGASPVDLVVALERLGRWCVPGPVTESIAVAPILLAHDDQAERSHGLASGELIATVA 122
G A +++VVA E+LG+ CVPGP+ ESIAV P+LL D +R LA G
Sbjct 61 HGGSSAGAIEMVVAAEQLGKHCVPGPIAESIAVLPVLLRDADLTDRLSDLADGRPATCAI 120
Query 123 MPPRVPRAVDADTAGLVLLAGDGSVTEGTPGDCHRSVDPSRRLYEVAASGQAWRAPKDVV 182
P A V + G+++ D RSVDP+R L V A G+ D V
Sbjct 121 APLAPLAADADADDADVYVVTAGTLSVAEIVDTERSVDPTRTLTRVRA-GEPLAEGID-V 178
Query 183 ARAYEFGALATAAQLVGAGQALLEAAVNYAKQRTQFGRAIGSYQAIKHKLADVHIAIELA 242
A + G LAT+AQL+G GQA+L A +YA+ R QFGR IGS+QA+KH LADV IA+E+A
Sbjct 179 DDAVDAGVLATSAQLLGLGQAMLTIAADYAQARKQFGRPIGSFQAVKHHLADVAIALEMA 238
Query 243 CPLVYGAAVSLE---------PRDVSAAKAAASEAALLAARWALQTHGAIGFTCEHDLSL 293
PLV+ AA+ ++ RDV+AAK AA++AA L+AR +LQ GAIG+T EHDLSL
Sbjct 239 RPLVHAAALGIDGQVPEGTNVRRDVAAAKVAAADAAHLSARRSLQVLGAIGYTAEHDLSL 298
Query 294 WLLRVQALHSAWGTPQEHRRRVLEAL 319
++ + +AL AWGTP HR R+LE+L
Sbjct 299 YITKTRALIGAWGTPAVHRDRILESL 324
>gi|290961219|ref|YP_003492401.1| oxidoreductase [Streptomyces scabiei 87.22]
gi|260650745|emb|CBG73861.1| putative oxidoreductase [Streptomyces scabiei 87.22]
Length=325
Score = 232 bits (591), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 149/322 (47%), Positives = 191/322 (60%), Gaps = 9/322 (2%)
Query 3 MEFALNEQQRDFAASIDAALGAADLPGVVRAWAAGDVAPGRKVWQQLANLGVTALGVAEK 62
M F L+ +QR FA S+DA L AAD P VRAW G+ GR +W ++A GV AL E
Sbjct 1 MRFLLDTEQRAFARSLDAMLTAADTPKAVRAWGRGEHLAGRALWSRVAEAGVFALAAPEA 60
Query 63 FDGLGASPVDLVVALERLGRWCVPGPVTESIAVAPILLAHDDQ--AERS-HGLASGELIA 119
++G+G PV+L VA LGR VPGP+ E++ +L D AER L SG +A
Sbjct 61 YEGVGPLPVELAVAFVELGRHAVPGPLVETVTAVVLLSGLRDPGPAERLLPALLSGTAMA 120
Query 120 TVAMPPRVPRAVDADTAGLVLLA----GDGSVTEGTPGDCHRSVDPSRRLYEVAASGQAW 175
TVA P A+D D A L G+ + G G +DP+RR + G
Sbjct 121 TVAPSPEA-YALDGDAATTHLSLDPERGELRLRPGH-GPVRPCLDPARRPTPLTPGGTLL 178
Query 176 RAPKDVVARAYEFGALATAAQLVGAGQALLEAAVNYAKQRTQFGRAIGSYQAIKHKLADV 235
++ARA + LA AAQ +G G ALL+ V Y +QRTQFG IGS+QA+KH+LAD
Sbjct 179 ATDPALLARALVWARLAVAAQALGVGLALLDRTVAYVRQRTQFGVPIGSFQAVKHRLADA 238
Query 236 HIAIELACPLVYGAAVSLEPRDVSAAKAAASEAALLAARWALQTHGAIGFTCEHDLSLWL 295
+A+E A PLV+GAAV+L+P D +AAK A EAA AR ALQ HGAIG+T E+DLSLW
Sbjct 239 KVALEFARPLVFGAAVTLDPADAAAAKVTACEAAYTTARTALQLHGAIGYTAEYDLSLWF 298
Query 296 LRVQALHSAWGTPQEHRRRVLE 317
R +AL +AWGTP R VL+
Sbjct 299 TRARALRTAWGTPAACRATVLD 320
>gi|145595143|ref|YP_001159440.1| acyl-CoA dehydrogenase domain-containing protein [Salinispora
tropica CNB-440]
gi|145304480|gb|ABP55062.1| acyl-CoA dehydrogenase domain protein [Salinispora tropica CNB-440]
Length=335
Score = 230 bits (586), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 165/329 (51%), Positives = 200/329 (61%), Gaps = 12/329 (3%)
Query 3 MEFALNEQQRDFAASIDAALGAADLPGVVRAWAAGDVAPGRKVWQQLANLGVTALGVAEK 62
M+ + +Q FAA++ A L AD+P V R WAA + APG+ VW++LA LGVT L V +
Sbjct 1 MKLTPSAEQDQFAAALHAMLTEADIPTVARQWAADNPAPGQVVWRRLAELGVTGLAVPAR 60
Query 63 FDGLGASPVDLVVALERLGRWCVPGPVTESIAVAPILLAH--DDQAERS--HGLASGELI 118
+ GL A P D+VVA E LG +PGP ESIA P+LL DD S LASGE+I
Sbjct 61 WGGLAAHPADVVVACEVLGHHALPGPAAESIAALPMLLTTLGDDALCESWLPRLASGEVI 120
Query 119 ATVAMPPRVPRAVDADTAGLVLLAGDGSVTEGTPGDCHRSVDPSRRLYEVAASGQAWRAP 178
T+A+ P VP A DAD LVL A + ++ G PG RSVD +RRL EVA P
Sbjct 121 GTLAVAPHVPYATDADVVSLVLRADEQTLRLGAPGPRLRSVDDTRRLVEVADGALLATGP 180
Query 179 K--DVVARAYEFGALATAAQLVGAGQALLEAAVNYAKQRTQFGRAIGSYQAIKHKLADVH 236
VA A GALA AAQL+GAG ALLE + YA QRTQF + IG +QA+KH LADV
Sbjct 181 AVGPAVAHALNAGALACAAQLLGAGHALLETTLRYAGQRTQFDQPIGQFQAVKHLLADVA 240
Query 237 IAIELACPLVYGAAV------SLEPRDVSAAKAAASEAALLAARWALQTHGAIGFTCEHD 290
I +E A PL+Y AAV S RD+SAAK A ++AA AAR ALQ HGAIG+ E
Sbjct 241 IGLEFARPLLYAAAVALADHPSTAARDISAAKVACADAAQRAARTALQVHGAIGYARESG 300
Query 291 LSLWLLRVQALHSAWGTPQEHRRRVLEAL 319
L WL +V AL WGT HR R+ AL
Sbjct 301 LGSWLTKVWALARTWGTQSFHRDRIRTAL 329
>gi|29832737|ref|NP_827371.1| acyl-CoA dehydrogenase [Streptomyces avermitilis MA-4680]
gi|29609857|dbj|BAC73906.1| putative acyl-CoA dehydrogenase [Streptomyces avermitilis MA-4680]
Length=319
Score = 228 bits (582), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 154/321 (48%), Positives = 196/321 (62%), Gaps = 16/321 (4%)
Query 3 MEFALNEQQRDFAASIDAALGAADLPGVVRAWAAGDVAPGRKVWQQLANLGVTALGVAEK 62
M F L+ QQRDFA S+DA L AAD P V+R GD R +W ++A GV A V E
Sbjct 1 MRFLLSPQQRDFARSLDAMLTAADTPSVIR----GDHTARRALWSRIAEAGVFAPAVPEA 56
Query 63 FDGLGASPVDLVVALERLGRWCVPGPVTESIAVAPILLAHDDQAERSH---GLASGELIA 119
++G+G PVDL VA LGR VPGPV E++ A +L A + GLA+GE +A
Sbjct 57 YEGMGPLPVDLAVAFVELGRHAVPGPVVETVLAAALLAALPEPGPAKRLLPGLAAGETVA 116
Query 120 TVAMPPRVPRAVDADTAGLVLLAGDGSVTEGTPG--DCHRSVDPSRRLYEVAASGQAWRA 177
TV P A+D D A +VL G + PG D S+DP RR+ G+ R
Sbjct 117 TVG----APYALDGDAADVVLAVRGGELWLA-PGVADVRPSLDPGRRITTPLPGGE--RI 169
Query 178 PKDVVARAYEFGALATAAQLVGAGQALLEAAVNYAKQRTQFGRAIGSYQAIKHKLADVHI 237
V A+++ LATAAQ +G G ALL+ V + +R QFG GS+QA+KH+LAD
Sbjct 170 SSRVPGHAFDWARLATAAQALGVGLALLDRTVTHVTRRVQFGVPTGSFQAVKHRLADAKT 229
Query 238 AIELACPLVYGAAVSLEPRDVSAAKAAASEAALLAARWALQTHGAIGFTCEHDLSLWLLR 297
A+E A PL++GAAV+L PRDV+AAKAAA EAA AR ALQ HGAIG+T E+DLSLWL +
Sbjct 230 ALEFARPLLFGAAVTLAPRDVAAAKAAACEAAYATARTALQLHGAIGYTAEYDLSLWLTK 289
Query 298 VQALHSAWGTPQEHRRRVLEA 318
+AL +AWG+P E R VL A
Sbjct 290 ARALRTAWGSPAECRADVLSA 310
>gi|307086357|ref|ZP_07495470.1| putative acyl-CoA dehydrogenase, C- domain protein [Mycobacterium
tuberculosis SUMu012]
gi|308364180|gb|EFP53031.1| putative acyl-CoA dehydrogenase, C- domain protein [Mycobacterium
tuberculosis SUMu012]
Length=110
Score = 223 bits (569), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 110/110 (100%), Positives = 110/110 (100%), Gaps = 0/110 (0%)
Query 210 NYAKQRTQFGRAIGSYQAIKHKLADVHIAIELACPLVYGAAVSLEPRDVSAAKAAASEAA 269
NYAKQRTQFGRAIGSYQAIKHKLADVHIAIELACPLVYGAAVSLEPRDVSAAKAAASEAA
Sbjct 1 NYAKQRTQFGRAIGSYQAIKHKLADVHIAIELACPLVYGAAVSLEPRDVSAAKAAASEAA 60
Query 270 LLAARWALQTHGAIGFTCEHDLSLWLLRVQALHSAWGTPQEHRRRVLEAL 319
LLAARWALQTHGAIGFTCEHDLSLWLLRVQALHSAWGTPQEHRRRVLEAL
Sbjct 61 LLAARWALQTHGAIGFTCEHDLSLWLLRVQALHSAWGTPQEHRRRVLEAL 110
Lambda K H
0.319 0.132 0.395
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 558531753480
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40