BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv3564 Length=318 Score E Sequences producing significant alignments: (Bits) Value gi|308232501|ref|ZP_07664100.1| acyl-CoA dehydrogenase fadE33 [M... 632 3e-179 gi|15610700|ref|NP_218081.1| acyl-CoA dehydrogenase FADE33 [Myco... 630 1e-178 gi|148824770|ref|YP_001289524.1| acyl-CoA dehydrogenase fadE33 [... 627 5e-178 gi|306791158|ref|ZP_07429460.1| acyl-CoA dehydrogenase fadE33 [M... 613 1e-173 gi|289752277|ref|ZP_06511655.1| acyl-CoA dehydrogenase fadE33 [M... 583 2e-164 gi|289747401|ref|ZP_06506779.1| acyl-CoA dehydrogenase fadE33 [M... 535 4e-150 gi|289571806|ref|ZP_06452033.1| acyl-CoA dehydrogenase fadE33 [M... 517 8e-145 gi|342862393|ref|ZP_08719033.1| acyl-CoA dehydrogenase [Mycobact... 484 5e-135 gi|240169779|ref|ZP_04748438.1| putative acyl-CoA dehydrogenase ... 484 1e-134 gi|118462868|ref|YP_879877.1| acyl-CoA dehydrogenase [Mycobacter... 476 3e-132 gi|41406601|ref|NP_959437.1| FadE33 [Mycobacterium avium subsp. ... 474 7e-132 gi|118619309|ref|YP_907641.1| acyl-CoA dehydrogenase FadE33 [Myc... 473 2e-131 gi|254822736|ref|ZP_05227737.1| putative acyl-CoA dehydrogenase ... 472 3e-131 gi|183985021|ref|YP_001853312.1| acyl-CoA dehydrogenase FadE33 [... 458 5e-127 gi|296166609|ref|ZP_06849038.1| probable acyl-CoA dehydrogenase ... 456 2e-126 gi|118468142|ref|YP_890240.1| acyl-CoA dehydrogenase [Mycobacter... 425 6e-117 gi|333992360|ref|YP_004524974.1| acyl-CoA dehydrogenase [Mycobac... 418 6e-115 gi|145222069|ref|YP_001132747.1| acyl-CoA dehydrogenase domain-c... 414 1e-113 gi|120406237|ref|YP_956066.1| acyl-CoA dehydrogenase domain-cont... 396 2e-108 gi|108801660|ref|YP_641857.1| acyl-CoA dehydrogenase-like protei... 379 4e-103 gi|169627696|ref|YP_001701345.1| acyl-CoA dehydrogenase FadE [My... 376 3e-102 gi|226363946|ref|YP_002781728.1| acyl-CoA dehydrogenase [Rhodoco... 255 6e-66 gi|300785286|ref|YP_003765577.1| acyl-CoA dehydrogenase [Amycola... 244 9e-63 gi|111021563|ref|YP_704535.1| acyl-CoA dehydrogenase [Rhodococcu... 239 5e-61 gi|312138164|ref|YP_004005500.1| acyl-CoA dehydrogenase [Rhodoco... 239 6e-61 gi|325674932|ref|ZP_08154619.1| acyl-CoA dehydrogenase [Rhodococ... 238 1e-60 gi|226304375|ref|YP_002764333.1| acyl-CoA dehydrogenase [Rhodoco... 233 3e-59 gi|229494614|ref|ZP_04388377.1| acyl-CoA dehydrogenase domain pr... 231 1e-58 gi|54022443|ref|YP_116685.1| putative acyl-CoA dehydrogenase [No... 224 1e-56 gi|333918611|ref|YP_004492192.1| acyl-CoA dehydrogenase [Amycoli... 221 8e-56 gi|262200923|ref|YP_003272131.1| acyl-CoA dehydrogenase domain-c... 210 2e-52 gi|119716995|ref|YP_923960.1| acyl-CoA dehydrogenase domain-cont... 201 9e-50 gi|296141511|ref|YP_003648754.1| acyl-CoA dehydrogenase domain-c... 201 9e-50 gi|145595144|ref|YP_001159441.1| acyl-CoA dehydrogenase domain-c... 199 5e-49 gi|254774665|ref|ZP_05216181.1| acyl-CoA dehydrogenase domain-co... 197 2e-48 gi|302528338|ref|ZP_07280680.1| pimeloyl-CoA dehydrogenase, smal... 196 4e-48 gi|326328932|ref|ZP_08195263.1| putative acyl-CoA dehydrogenase ... 192 4e-47 gi|343925878|ref|ZP_08765393.1| putative acyl-CoA dehydrogenase ... 192 7e-47 gi|271968078|ref|YP_003342274.1| acyl-CoA dehydrogenase domain-c... 191 2e-46 gi|159038391|ref|YP_001537644.1| acyl-CoA dehydrogenase domain-c... 190 2e-46 gi|300788994|ref|YP_003769285.1| acyl-CoA dehydrogenase [Amycola... 183 4e-44 gi|111222877|ref|YP_713671.1| putative acyl-CoA dehydrogenase [F... 183 4e-44 gi|288916035|ref|ZP_06410417.1| acyl-CoA dehydrogenase domain pr... 183 4e-44 gi|326384568|ref|ZP_08206247.1| acyl-CoA dehydrogenase domain-co... 182 6e-44 gi|342857570|ref|ZP_08714226.1| acyl-CoA dehydrogenase domain-co... 181 2e-43 gi|312196370|ref|YP_004016431.1| acyl-CoA dehydrogenase domain-c... 180 3e-43 gi|183982865|ref|YP_001851156.1| acyl-CoA dehydrogenase FadE18 [... 177 2e-42 gi|118618310|ref|YP_906642.1| acyl-CoA dehydrogenase FadE18 [Myc... 177 2e-42 gi|148556534|ref|YP_001264116.1| acyl-CoA dehydrogenase domain-c... 175 7e-42 gi|300785722|ref|YP_003766013.1| acyl-CoA dehydrogenase [Amycola... 175 8e-42 >gi|308232501|ref|ZP_07664100.1| acyl-CoA dehydrogenase fadE33 [Mycobacterium tuberculosis SUMu001] gi|308369162|ref|ZP_07666670.1| acyl-CoA dehydrogenase fadE33 [Mycobacterium tuberculosis SUMu002] gi|308371387|ref|ZP_07667153.1| acyl-CoA dehydrogenase fadE33 [Mycobacterium tuberculosis SUMu003] 7 more sequence titles Length=344 Score = 632 bits (1629), Expect = 3e-179, Method: Compositional matrix adjust. Identities = 318/318 (100%), Positives = 318/318 (100%), Gaps = 0/318 (0%) Query 1 MTPPEERQMLRETVASLVAKHAGPAAVRAAMASDRGYDESLWRLLCEQVGAAALVIPEEL 60 MTPPEERQMLRETVASLVAKHAGPAAVRAAMASDRGYDESLWRLLCEQVGAAALVIPEEL Sbjct 27 MTPPEERQMLRETVASLVAKHAGPAAVRAAMASDRGYDESLWRLLCEQVGAAALVIPEEL 86 Query 61 GGAGGELADAAIVVQELGRALVPSPLLGTTLAELALLAAAKPDAQALTELAQGSAIGALV 120 GGAGGELADAAIVVQELGRALVPSPLLGTTLAELALLAAAKPDAQALTELAQGSAIGALV Sbjct 87 GGAGGELADAAIVVQELGRALVPSPLLGTTLAELALLAAAKPDAQALTELAQGSAIGALV 146 Query 121 LDPDYVVNGDIADIVVAATSGQLTRWTRFSAQPVATMDPTRRLARLQSEETEPLCPDPGI 180 LDPDYVVNGDIADIVVAATSGQLTRWTRFSAQPVATMDPTRRLARLQSEETEPLCPDPGI Sbjct 147 LDPDYVVNGDIADIVVAATSGQLTRWTRFSAQPVATMDPTRRLARLQSEETEPLCPDPGI 206 Query 181 ADTAAILLAAEQIGAAERCLQLTVEYAKSRVQFGRPIGSFQALKHRMADLYVTIAAARAV 240 ADTAAILLAAEQIGAAERCLQLTVEYAKSRVQFGRPIGSFQALKHRMADLYVTIAAARAV Sbjct 207 ADTAAILLAAEQIGAAERCLQLTVEYAKSRVQFGRPIGSFQALKHRMADLYVTIAAARAV 266 Query 241 VADACHAPTPTNAATARLAASEALSTAAAEGIQLHGGIAITWEHDMHLYFKRAHGSAQLL 300 VADACHAPTPTNAATARLAASEALSTAAAEGIQLHGGIAITWEHDMHLYFKRAHGSAQLL Sbjct 267 VADACHAPTPTNAATARLAASEALSTAAAEGIQLHGGIAITWEHDMHLYFKRAHGSAQLL 326 Query 301 ESPREVLRRLESEVWESP 318 ESPREVLRRLESEVWESP Sbjct 327 ESPREVLRRLESEVWESP 344 >gi|15610700|ref|NP_218081.1| acyl-CoA dehydrogenase FADE33 [Mycobacterium tuberculosis H37Rv] gi|15843176|ref|NP_338213.1| acyl-CoA dehydrogenase, putative [Mycobacterium tuberculosis CDC1551] gi|31794740|ref|NP_857233.1| acyl-CoA dehydrogenase FADE33 [Mycobacterium bovis AF2122/97] 56 more sequence titles Length=318 Score = 630 bits (1624), Expect = 1e-178, Method: Compositional matrix adjust. Identities = 318/318 (100%), Positives = 318/318 (100%), Gaps = 0/318 (0%) Query 1 MTPPEERQMLRETVASLVAKHAGPAAVRAAMASDRGYDESLWRLLCEQVGAAALVIPEEL 60 MTPPEERQMLRETVASLVAKHAGPAAVRAAMASDRGYDESLWRLLCEQVGAAALVIPEEL Sbjct 1 MTPPEERQMLRETVASLVAKHAGPAAVRAAMASDRGYDESLWRLLCEQVGAAALVIPEEL 60 Query 61 GGAGGELADAAIVVQELGRALVPSPLLGTTLAELALLAAAKPDAQALTELAQGSAIGALV 120 GGAGGELADAAIVVQELGRALVPSPLLGTTLAELALLAAAKPDAQALTELAQGSAIGALV Sbjct 61 GGAGGELADAAIVVQELGRALVPSPLLGTTLAELALLAAAKPDAQALTELAQGSAIGALV 120 Query 121 LDPDYVVNGDIADIVVAATSGQLTRWTRFSAQPVATMDPTRRLARLQSEETEPLCPDPGI 180 LDPDYVVNGDIADIVVAATSGQLTRWTRFSAQPVATMDPTRRLARLQSEETEPLCPDPGI Sbjct 121 LDPDYVVNGDIADIVVAATSGQLTRWTRFSAQPVATMDPTRRLARLQSEETEPLCPDPGI 180 Query 181 ADTAAILLAAEQIGAAERCLQLTVEYAKSRVQFGRPIGSFQALKHRMADLYVTIAAARAV 240 ADTAAILLAAEQIGAAERCLQLTVEYAKSRVQFGRPIGSFQALKHRMADLYVTIAAARAV Sbjct 181 ADTAAILLAAEQIGAAERCLQLTVEYAKSRVQFGRPIGSFQALKHRMADLYVTIAAARAV 240 Query 241 VADACHAPTPTNAATARLAASEALSTAAAEGIQLHGGIAITWEHDMHLYFKRAHGSAQLL 300 VADACHAPTPTNAATARLAASEALSTAAAEGIQLHGGIAITWEHDMHLYFKRAHGSAQLL Sbjct 241 VADACHAPTPTNAATARLAASEALSTAAAEGIQLHGGIAITWEHDMHLYFKRAHGSAQLL 300 Query 301 ESPREVLRRLESEVWESP 318 ESPREVLRRLESEVWESP Sbjct 301 ESPREVLRRLESEVWESP 318 >gi|148824770|ref|YP_001289524.1| acyl-CoA dehydrogenase fadE33 [Mycobacterium tuberculosis F11] gi|148723297|gb|ABR07922.1| acyl-CoA dehydrogenase fadE33 [Mycobacterium tuberculosis F11] Length=318 Score = 627 bits (1618), Expect = 5e-178, Method: Compositional matrix adjust. Identities = 317/318 (99%), Positives = 318/318 (100%), Gaps = 0/318 (0%) Query 1 MTPPEERQMLRETVASLVAKHAGPAAVRAAMASDRGYDESLWRLLCEQVGAAALVIPEEL 60 MTPPEERQMLRETVASLVAKHAGPAAVRAAMASDRGYDESLWRLLCEQVGAAALVIPEEL Sbjct 1 MTPPEERQMLRETVASLVAKHAGPAAVRAAMASDRGYDESLWRLLCEQVGAAALVIPEEL 60 Query 61 GGAGGELADAAIVVQELGRALVPSPLLGTTLAELALLAAAKPDAQALTELAQGSAIGALV 120 GGAGGELADAAIVVQELGRALVPSPLLGTTLAELALLAAAKPDAQALTELAQGSAIGALV Sbjct 61 GGAGGELADAAIVVQELGRALVPSPLLGTTLAELALLAAAKPDAQALTELAQGSAIGALV 120 Query 121 LDPDYVVNGDIADIVVAATSGQLTRWTRFSAQPVATMDPTRRLARLQSEETEPLCPDPGI 180 LDPDYVVNGDIADIVVAATSGQLTRWTRFSAQPVATMDPTRRLARLQSEETEPLCPDPGI Sbjct 121 LDPDYVVNGDIADIVVAATSGQLTRWTRFSAQPVATMDPTRRLARLQSEETEPLCPDPGI 180 Query 181 ADTAAILLAAEQIGAAERCLQLTVEYAKSRVQFGRPIGSFQALKHRMADLYVTIAAARAV 240 ADTAAILLAAEQIGAAERCLQLTVE+AKSRVQFGRPIGSFQALKHRMADLYVTIAAARAV Sbjct 181 ADTAAILLAAEQIGAAERCLQLTVEHAKSRVQFGRPIGSFQALKHRMADLYVTIAAARAV 240 Query 241 VADACHAPTPTNAATARLAASEALSTAAAEGIQLHGGIAITWEHDMHLYFKRAHGSAQLL 300 VADACHAPTPTNAATARLAASEALSTAAAEGIQLHGGIAITWEHDMHLYFKRAHGSAQLL Sbjct 241 VADACHAPTPTNAATARLAASEALSTAAAEGIQLHGGIAITWEHDMHLYFKRAHGSAQLL 300 Query 301 ESPREVLRRLESEVWESP 318 ESPREVLRRLESEVWESP Sbjct 301 ESPREVLRRLESEVWESP 318 >gi|306791158|ref|ZP_07429460.1| acyl-CoA dehydrogenase fadE33 [Mycobacterium tuberculosis SUMu005] gi|308340273|gb|EFP29124.1| acyl-CoA dehydrogenase fadE33 [Mycobacterium tuberculosis SUMu005] gi|339296383|gb|AEJ48494.1| acyl-CoA dehydrogenase fadE33 [Mycobacterium tuberculosis CCDC5079] gi|339299984|gb|AEJ52094.1| acyl-CoA dehydrogenase fadE33 [Mycobacterium tuberculosis CCDC5180] Length=310 Score = 613 bits (1580), Expect = 1e-173, Method: Compositional matrix adjust. Identities = 310/310 (100%), Positives = 310/310 (100%), Gaps = 0/310 (0%) Query 9 MLRETVASLVAKHAGPAAVRAAMASDRGYDESLWRLLCEQVGAAALVIPEELGGAGGELA 68 MLRETVASLVAKHAGPAAVRAAMASDRGYDESLWRLLCEQVGAAALVIPEELGGAGGELA Sbjct 1 MLRETVASLVAKHAGPAAVRAAMASDRGYDESLWRLLCEQVGAAALVIPEELGGAGGELA 60 Query 69 DAAIVVQELGRALVPSPLLGTTLAELALLAAAKPDAQALTELAQGSAIGALVLDPDYVVN 128 DAAIVVQELGRALVPSPLLGTTLAELALLAAAKPDAQALTELAQGSAIGALVLDPDYVVN Sbjct 61 DAAIVVQELGRALVPSPLLGTTLAELALLAAAKPDAQALTELAQGSAIGALVLDPDYVVN 120 Query 129 GDIADIVVAATSGQLTRWTRFSAQPVATMDPTRRLARLQSEETEPLCPDPGIADTAAILL 188 GDIADIVVAATSGQLTRWTRFSAQPVATMDPTRRLARLQSEETEPLCPDPGIADTAAILL Sbjct 121 GDIADIVVAATSGQLTRWTRFSAQPVATMDPTRRLARLQSEETEPLCPDPGIADTAAILL 180 Query 189 AAEQIGAAERCLQLTVEYAKSRVQFGRPIGSFQALKHRMADLYVTIAAARAVVADACHAP 248 AAEQIGAAERCLQLTVEYAKSRVQFGRPIGSFQALKHRMADLYVTIAAARAVVADACHAP Sbjct 181 AAEQIGAAERCLQLTVEYAKSRVQFGRPIGSFQALKHRMADLYVTIAAARAVVADACHAP 240 Query 249 TPTNAATARLAASEALSTAAAEGIQLHGGIAITWEHDMHLYFKRAHGSAQLLESPREVLR 308 TPTNAATARLAASEALSTAAAEGIQLHGGIAITWEHDMHLYFKRAHGSAQLLESPREVLR Sbjct 241 TPTNAATARLAASEALSTAAAEGIQLHGGIAITWEHDMHLYFKRAHGSAQLLESPREVLR 300 Query 309 RLESEVWESP 318 RLESEVWESP Sbjct 301 RLESEVWESP 310 >gi|289752277|ref|ZP_06511655.1| acyl-CoA dehydrogenase fadE33 [Mycobacterium tuberculosis T92] gi|289692864|gb|EFD60293.1| acyl-CoA dehydrogenase fadE33 [Mycobacterium tuberculosis T92] Length=322 Score = 583 bits (1502), Expect = 2e-164, Method: Compositional matrix adjust. Identities = 295/295 (100%), Positives = 295/295 (100%), Gaps = 0/295 (0%) Query 24 PAAVRAAMASDRGYDESLWRLLCEQVGAAALVIPEELGGAGGELADAAIVVQELGRALVP 83 PAAVRAAMASDRGYDESLWRLLCEQVGAAALVIPEELGGAGGELADAAIVVQELGRALVP Sbjct 28 PAAVRAAMASDRGYDESLWRLLCEQVGAAALVIPEELGGAGGELADAAIVVQELGRALVP 87 Query 84 SPLLGTTLAELALLAAAKPDAQALTELAQGSAIGALVLDPDYVVNGDIADIVVAATSGQL 143 SPLLGTTLAELALLAAAKPDAQALTELAQGSAIGALVLDPDYVVNGDIADIVVAATSGQL Sbjct 88 SPLLGTTLAELALLAAAKPDAQALTELAQGSAIGALVLDPDYVVNGDIADIVVAATSGQL 147 Query 144 TRWTRFSAQPVATMDPTRRLARLQSEETEPLCPDPGIADTAAILLAAEQIGAAERCLQLT 203 TRWTRFSAQPVATMDPTRRLARLQSEETEPLCPDPGIADTAAILLAAEQIGAAERCLQLT Sbjct 148 TRWTRFSAQPVATMDPTRRLARLQSEETEPLCPDPGIADTAAILLAAEQIGAAERCLQLT 207 Query 204 VEYAKSRVQFGRPIGSFQALKHRMADLYVTIAAARAVVADACHAPTPTNAATARLAASEA 263 VEYAKSRVQFGRPIGSFQALKHRMADLYVTIAAARAVVADACHAPTPTNAATARLAASEA Sbjct 208 VEYAKSRVQFGRPIGSFQALKHRMADLYVTIAAARAVVADACHAPTPTNAATARLAASEA 267 Query 264 LSTAAAEGIQLHGGIAITWEHDMHLYFKRAHGSAQLLESPREVLRRLESEVWESP 318 LSTAAAEGIQLHGGIAITWEHDMHLYFKRAHGSAQLLESPREVLRRLESEVWESP Sbjct 268 LSTAAAEGIQLHGGIAITWEHDMHLYFKRAHGSAQLLESPREVLRRLESEVWESP 322 >gi|289747401|ref|ZP_06506779.1| acyl-CoA dehydrogenase fadE33 [Mycobacterium tuberculosis 02_1987] gi|289687929|gb|EFD55417.1| acyl-CoA dehydrogenase fadE33 [Mycobacterium tuberculosis 02_1987] Length=304 Score = 535 bits (1378), Expect = 4e-150, Method: Compositional matrix adjust. Identities = 274/274 (100%), Positives = 274/274 (100%), Gaps = 0/274 (0%) Query 9 MLRETVASLVAKHAGPAAVRAAMASDRGYDESLWRLLCEQVGAAALVIPEELGGAGGELA 68 MLRETVASLVAKHAGPAAVRAAMASDRGYDESLWRLLCEQVGAAALVIPEELGGAGGELA Sbjct 1 MLRETVASLVAKHAGPAAVRAAMASDRGYDESLWRLLCEQVGAAALVIPEELGGAGGELA 60 Query 69 DAAIVVQELGRALVPSPLLGTTLAELALLAAAKPDAQALTELAQGSAIGALVLDPDYVVN 128 DAAIVVQELGRALVPSPLLGTTLAELALLAAAKPDAQALTELAQGSAIGALVLDPDYVVN Sbjct 61 DAAIVVQELGRALVPSPLLGTTLAELALLAAAKPDAQALTELAQGSAIGALVLDPDYVVN 120 Query 129 GDIADIVVAATSGQLTRWTRFSAQPVATMDPTRRLARLQSEETEPLCPDPGIADTAAILL 188 GDIADIVVAATSGQLTRWTRFSAQPVATMDPTRRLARLQSEETEPLCPDPGIADTAAILL Sbjct 121 GDIADIVVAATSGQLTRWTRFSAQPVATMDPTRRLARLQSEETEPLCPDPGIADTAAILL 180 Query 189 AAEQIGAAERCLQLTVEYAKSRVQFGRPIGSFQALKHRMADLYVTIAAARAVVADACHAP 248 AAEQIGAAERCLQLTVEYAKSRVQFGRPIGSFQALKHRMADLYVTIAAARAVVADACHAP Sbjct 181 AAEQIGAAERCLQLTVEYAKSRVQFGRPIGSFQALKHRMADLYVTIAAARAVVADACHAP 240 Query 249 TPTNAATARLAASEALSTAAAEGIQLHGGIAITW 282 TPTNAATARLAASEALSTAAAEGIQLHGGIAITW Sbjct 241 TPTNAATARLAASEALSTAAAEGIQLHGGIAITW 274 >gi|289571806|ref|ZP_06452033.1| acyl-CoA dehydrogenase fadE33 [Mycobacterium tuberculosis T17] gi|289545560|gb|EFD49208.1| acyl-CoA dehydrogenase fadE33 [Mycobacterium tuberculosis T17] Length=289 Score = 517 bits (1332), Expect = 8e-145, Method: Compositional matrix adjust. Identities = 263/263 (100%), Positives = 263/263 (100%), Gaps = 0/263 (0%) Query 1 MTPPEERQMLRETVASLVAKHAGPAAVRAAMASDRGYDESLWRLLCEQVGAAALVIPEEL 60 MTPPEERQMLRETVASLVAKHAGPAAVRAAMASDRGYDESLWRLLCEQVGAAALVIPEEL Sbjct 27 MTPPEERQMLRETVASLVAKHAGPAAVRAAMASDRGYDESLWRLLCEQVGAAALVIPEEL 86 Query 61 GGAGGELADAAIVVQELGRALVPSPLLGTTLAELALLAAAKPDAQALTELAQGSAIGALV 120 GGAGGELADAAIVVQELGRALVPSPLLGTTLAELALLAAAKPDAQALTELAQGSAIGALV Sbjct 87 GGAGGELADAAIVVQELGRALVPSPLLGTTLAELALLAAAKPDAQALTELAQGSAIGALV 146 Query 121 LDPDYVVNGDIADIVVAATSGQLTRWTRFSAQPVATMDPTRRLARLQSEETEPLCPDPGI 180 LDPDYVVNGDIADIVVAATSGQLTRWTRFSAQPVATMDPTRRLARLQSEETEPLCPDPGI Sbjct 147 LDPDYVVNGDIADIVVAATSGQLTRWTRFSAQPVATMDPTRRLARLQSEETEPLCPDPGI 206 Query 181 ADTAAILLAAEQIGAAERCLQLTVEYAKSRVQFGRPIGSFQALKHRMADLYVTIAAARAV 240 ADTAAILLAAEQIGAAERCLQLTVEYAKSRVQFGRPIGSFQALKHRMADLYVTIAAARAV Sbjct 207 ADTAAILLAAEQIGAAERCLQLTVEYAKSRVQFGRPIGSFQALKHRMADLYVTIAAARAV 266 Query 241 VADACHAPTPTNAATARLAASEA 263 VADACHAPTPTNAATARLAASEA Sbjct 267 VADACHAPTPTNAATARLAASEA 289 >gi|342862393|ref|ZP_08719033.1| acyl-CoA dehydrogenase [Mycobacterium colombiense CECT 3035] gi|342130064|gb|EGT83398.1| acyl-CoA dehydrogenase [Mycobacterium colombiense CECT 3035] Length=316 Score = 484 bits (1247), Expect = 5e-135, Method: Compositional matrix adjust. Identities = 257/314 (82%), Positives = 286/314 (92%), Gaps = 0/314 (0%) Query 5 EERQMLRETVASLVAKHAGPAAVRAAMASDRGYDESLWRLLCEQVGAAALVIPEELGGAG 64 EER++LRETVA+LV KHAGPAAVRAAM SDRGYDESLWRLLCEQVGAAALVIPEELGGAG Sbjct 3 EERELLRETVAALVTKHAGPAAVRAAMESDRGYDESLWRLLCEQVGAAALVIPEELGGAG 62 Query 65 GELADAAIVVQELGRALVPSPLLGTTLAELALLAAAKPDAQALTELAQGSAIGALVLDPD 124 GELADAA V+QELGRALVPSPLLGTTLAELALL+AA+PDA L LA+G +IGALVLD D Sbjct 63 GELADAAAVLQELGRALVPSPLLGTTLAELALLSAAEPDAATLETLAEGVSIGALVLDAD 122 Query 125 YVVNGDIADIVVAATSGQLTRWTRFSAQPVATMDPTRRLARLQSEETEPLCPDPGIADTA 184 YVVNGDIAD+VVAA G ++RWTRF A+PV TMDPTRRLARL +EETE + DPG+A TA Sbjct 123 YVVNGDIADVVVAAGDGTVSRWTRFRAEPVTTMDPTRRLARLTAEETESIGTDPGLAGTA 182 Query 185 AILLAAEQIGAAERCLQLTVEYAKSRVQFGRPIGSFQALKHRMADLYVTIAAARAVVADA 244 A+LLAAEQIGAAERCL+LTVEYAK RVQFGRPIGSFQA+KHRMADLYVT+AAA+ VVADA Sbjct 183 AVLLAAEQIGAAERCLELTVEYAKDRVQFGRPIGSFQAVKHRMADLYVTVAAAKTVVADA 242 Query 245 CHAPTPTNAATARLAASEALSTAAAEGIQLHGGIAITWEHDMHLYFKRAHGSAQLLESPR 304 C PTPTNAA ARLAA+EAL+ AAEGIQLHGGIAITWEHDMHLYFKRAHGSA LL++P+ Sbjct 243 CDDPTPTNAAAARLAATEALNAVAAEGIQLHGGIAITWEHDMHLYFKRAHGSAHLLDTPQ 302 Query 305 EVLRRLESEVWESP 318 E+L+RLESEV ++P Sbjct 303 ELLKRLESEVLQTP 316 >gi|240169779|ref|ZP_04748438.1| putative acyl-CoA dehydrogenase [Mycobacterium kansasii ATCC 12478] Length=316 Score = 484 bits (1245), Expect = 1e-134, Method: Compositional matrix adjust. Identities = 257/314 (82%), Positives = 286/314 (92%), Gaps = 0/314 (0%) Query 5 EERQMLRETVASLVAKHAGPAAVRAAMASDRGYDESLWRLLCEQVGAAALVIPEELGGAG 64 +ER+MLRETVA+LVAKHA PAAVRAAM S RGYDE+LWRLLCEQVGAA LV+PEELGGAG Sbjct 3 DEREMLRETVAALVAKHASPAAVRAAMGSGRGYDEALWRLLCEQVGAAVLVVPEELGGAG 62 Query 65 GELADAAIVVQELGRALVPSPLLGTTLAELALLAAAKPDAQALTELAQGSAIGALVLDPD 124 GELADAA V+QELGRALVPSPLLGTTLAELALLAA +PDA+ LT LA+G++IGALVLDPD Sbjct 63 GELADAATVLQELGRALVPSPLLGTTLAELALLAAPEPDAETLTRLAEGTSIGALVLDPD 122 Query 125 YVVNGDIADIVVAATSGQLTRWTRFSAQPVATMDPTRRLARLQSEETEPLCPDPGIADTA 184 +VVNGDIAD+VVAA GQL+RWTRF+AQPVATMDPTRRLAR+Q +ET + DPG+A +A Sbjct 123 FVVNGDIADVVVAAIDGQLSRWTRFTAQPVATMDPTRRLARMQPQETRTIGADPGLAHSA 182 Query 185 AILLAAEQIGAAERCLQLTVEYAKSRVQFGRPIGSFQALKHRMADLYVTIAAARAVVADA 244 A+LLAAEQIGAAERCL+LTVEY KSRVQFGRPIGSFQALKHRMADLYV +AAAR+VVADA Sbjct 183 AVLLAAEQIGAAERCLELTVEYTKSRVQFGRPIGSFQALKHRMADLYVMVAAARSVVADA 242 Query 245 CHAPTPTNAATARLAASEALSTAAAEGIQLHGGIAITWEHDMHLYFKRAHGSAQLLESPR 304 C+ PTP NAATARLAA EALS AAEGIQLHGGIAITWEHDMHLYFKRAHGS LL+SPR Sbjct 243 CNEPTPANAATARLAACEALSAVAAEGIQLHGGIAITWEHDMHLYFKRAHGSTHLLDSPR 302 Query 305 EVLRRLESEVWESP 318 +LR+LESEV +P Sbjct 303 NLLRQLESEVLPAP 316 >gi|118462868|ref|YP_879877.1| acyl-CoA dehydrogenase [Mycobacterium avium 104] gi|254773554|ref|ZP_05215070.1| putative acyl-CoA dehydrogenase [Mycobacterium avium subsp. avium ATCC 25291] gi|118164155|gb|ABK65052.1| putative acyl-CoA dehydrogenase [Mycobacterium avium 104] Length=319 Score = 476 bits (1224), Expect = 3e-132, Method: Compositional matrix adjust. Identities = 253/314 (81%), Positives = 284/314 (91%), Gaps = 0/314 (0%) Query 5 EERQMLRETVASLVAKHAGPAAVRAAMASDRGYDESLWRLLCEQVGAAALVIPEELGGAG 64 EERQMLRETVA+LVAKHAGPAAVR AM S+RGYDESLWRLLCEQVGAAALVIPEELGGAG Sbjct 6 EERQMLRETVAALVAKHAGPAAVRTAMESERGYDESLWRLLCEQVGAAALVIPEELGGAG 65 Query 65 GELADAAIVVQELGRALVPSPLLGTTLAELALLAAAKPDAQALTELAQGSAIGALVLDPD 124 GELADAA V+QELGRALVPSPLLGTTLAELALL AA+PD AL LA+GSAIGALVLDPD Sbjct 66 GELADAATVLQELGRALVPSPLLGTTLAELALLGAAEPDTAALQALAEGSAIGALVLDPD 125 Query 125 YVVNGDIADIVVAATSGQLTRWTRFSAQPVATMDPTRRLARLQSEETEPLCPDPGIADTA 184 YVVNGDIAD+V+ G+L+RWT +AQPV TMDPTRRLAR+++++TEP+ DPG+ADTA Sbjct 126 YVVNGDIADVVIGVEDGRLSRWTGVTAQPVTTMDPTRRLARVRAQQTEPIGTDPGLADTA 185 Query 185 AILLAAEQIGAAERCLQLTVEYAKSRVQFGRPIGSFQALKHRMADLYVTIAAARAVVADA 244 A+LLAAEQIGAAE+CL TVEYAK RVQFGRPIGSFQALKHRMADLYVT+AAA+AVV +A Sbjct 186 AVLLAAEQIGAAEQCLARTVEYAKDRVQFGRPIGSFQALKHRMADLYVTVAAAKAVVDEA 245 Query 245 CHAPTPTNAATARLAASEALSTAAAEGIQLHGGIAITWEHDMHLYFKRAHGSAQLLESPR 304 C P+PTNAATARLAA+EAL+ AAEGIQLHGGIAITWEHDMHLYFKRAHGSA LL++P+ Sbjct 246 CLDPSPTNAATARLAATEALNVVAAEGIQLHGGIAITWEHDMHLYFKRAHGSAHLLDTPQ 305 Query 305 EVLRRLESEVWESP 318 ++L RLE EV +P Sbjct 306 QLLTRLEPEVLATP 319 >gi|41406601|ref|NP_959437.1| FadE33 [Mycobacterium avium subsp. paratuberculosis K-10] gi|41394950|gb|AAS02820.1| FadE33 [Mycobacterium avium subsp. paratuberculosis K-10] gi|336458497|gb|EGO37470.1| acyl-CoA dehydrogenase [Mycobacterium avium subsp. paratuberculosis S397] Length=319 Score = 474 bits (1220), Expect = 7e-132, Method: Compositional matrix adjust. Identities = 252/314 (81%), Positives = 284/314 (91%), Gaps = 0/314 (0%) Query 5 EERQMLRETVASLVAKHAGPAAVRAAMASDRGYDESLWRLLCEQVGAAALVIPEELGGAG 64 EERQMLRETVA+LVAKHAGPAAVR AM S+RGYDESLWRLLCEQVGAAALVIPEELGGAG Sbjct 6 EERQMLRETVAALVAKHAGPAAVRTAMESERGYDESLWRLLCEQVGAAALVIPEELGGAG 65 Query 65 GELADAAIVVQELGRALVPSPLLGTTLAELALLAAAKPDAQALTELAQGSAIGALVLDPD 124 GELADAA V+QELGRALVPSPLLGTTLAELALL AA+PD AL LA+GSAIGALVLDPD Sbjct 66 GELADAATVLQELGRALVPSPLLGTTLAELALLGAAEPDTAALQALAEGSAIGALVLDPD 125 Query 125 YVVNGDIADIVVAATSGQLTRWTRFSAQPVATMDPTRRLARLQSEETEPLCPDPGIADTA 184 YVVNGDIAD+V+ G+L+RWT +AQPV TMDPTRRLAR+++++TEP+ DPG+ADTA Sbjct 126 YVVNGDIADVVIGVEDGRLSRWTGVTAQPVTTMDPTRRLARVRAQQTEPIGTDPGLADTA 185 Query 185 AILLAAEQIGAAERCLQLTVEYAKSRVQFGRPIGSFQALKHRMADLYVTIAAARAVVADA 244 A+LLAAEQIGAAE+CL TV+YAK RVQFGRPIGSFQALKHRMADLYVT+AAA+AVV +A Sbjct 186 AVLLAAEQIGAAEQCLARTVDYAKDRVQFGRPIGSFQALKHRMADLYVTVAAAKAVVDEA 245 Query 245 CHAPTPTNAATARLAASEALSTAAAEGIQLHGGIAITWEHDMHLYFKRAHGSAQLLESPR 304 C P+PTNAATARLAA+EAL+ AAEGIQLHGGIAITWEHDMHLYFKRAHGSA LL++P+ Sbjct 246 CLDPSPTNAATARLAATEALNVVAAEGIQLHGGIAITWEHDMHLYFKRAHGSAHLLDTPQ 305 Query 305 EVLRRLESEVWESP 318 ++L RLE EV +P Sbjct 306 QLLTRLEPEVLATP 319 >gi|118619309|ref|YP_907641.1| acyl-CoA dehydrogenase FadE33 [Mycobacterium ulcerans Agy99] gi|118571419|gb|ABL06170.1| acyl-CoA dehydrogenase FadE33 [Mycobacterium ulcerans Agy99] Length=320 Score = 473 bits (1217), Expect = 2e-131, Method: Compositional matrix adjust. Identities = 258/309 (84%), Positives = 282/309 (92%), Gaps = 0/309 (0%) Query 5 EERQMLRETVASLVAKHAGPAAVRAAMASDRGYDESLWRLLCEQVGAAALVIPEELGGAG 64 EER+MLRETVA+LV KHA PAAVR+AM S+RGYDE+LWRLLCEQVGAAALVIPEELGGAG Sbjct 3 EEREMLRETVAALVNKHASPAAVRSAMESERGYDETLWRLLCEQVGAAALVIPEELGGAG 62 Query 65 GELADAAIVVQELGRALVPSPLLGTTLAELALLAAAKPDAQALTELAQGSAIGALVLDPD 124 GELADAAIV+QELGRALVPSPLLGTTLAELALLAAA+PDA+ L LA+GS+IGALVLDPD Sbjct 63 GELADAAIVLQELGRALVPSPLLGTTLAELALLAAAEPDAKTLAGLAEGSSIGALVLDPD 122 Query 125 YVVNGDIADIVVAATSGQLTRWTRFSAQPVATMDPTRRLARLQSEETEPLCPDPGIADTA 184 YV+NGD AD+VVA+T GQL+RWTRFSA VATMDPTRRLA+L++EET L +PG+AD A Sbjct 123 YVLNGDTADVVVASTEGQLSRWTRFSAHRVATMDPTRRLAQLRAEETAFLGENPGLADAA 182 Query 185 AILLAAEQIGAAERCLQLTVEYAKSRVQFGRPIGSFQALKHRMADLYVTIAAARAVVADA 244 ILLAAEQIGAAERCL+LTVEYAKSRVQFGRPIGSFQALKHRMADLYV +AAARAVV +A Sbjct 183 GILLAAEQIGAAERCLELTVEYAKSRVQFGRPIGSFQALKHRMADLYVEVAAARAVVTEA 242 Query 245 CHAPTPTNAATARLAASEALSTAAAEGIQLHGGIAITWEHDMHLYFKRAHGSAQLLESPR 304 C APTPT+AATARLAA EAL AAEGIQLHGGIAITWEHDMHLYFKRAHGS LL SP Sbjct 243 CTAPTPTSAATARLAACEALCAVAAEGIQLHGGIAITWEHDMHLYFKRAHGSTHLLASPP 302 Query 305 EVLRRLESE 313 E+LRRLESE Sbjct 303 ELLRRLESE 311 >gi|254822736|ref|ZP_05227737.1| putative acyl-CoA dehydrogenase [Mycobacterium intracellulare ATCC 13950] Length=314 Score = 472 bits (1215), Expect = 3e-131, Method: Compositional matrix adjust. Identities = 259/314 (83%), Positives = 289/314 (93%), Gaps = 0/314 (0%) Query 5 EERQMLRETVASLVAKHAGPAAVRAAMASDRGYDESLWRLLCEQVGAAALVIPEELGGAG 64 EER++LRETVA+LVAKHAGPAAVRAAM SDRGYDESLWRLLCEQVGAAALVIPEELGGAG Sbjct 1 EERELLRETVAALVAKHAGPAAVRAAMESDRGYDESLWRLLCEQVGAAALVIPEELGGAG 60 Query 65 GELADAAIVVQELGRALVPSPLLGTTLAELALLAAAKPDAQALTELAQGSAIGALVLDPD 124 GELADAA V+QELGRALVPSPLLGTTLAELALL+AA+PDA L LA+G+AIGALVLDPD Sbjct 61 GELADAAAVLQELGRALVPSPLLGTTLAELALLSAAEPDAATLAGLAEGTAIGALVLDPD 120 Query 125 YVVNGDIADIVVAATSGQLTRWTRFSAQPVATMDPTRRLARLQSEETEPLCPDPGIADTA 184 YVVNGDIAD+VVA G+L+RWTRFSAQ V TMDPTRRLAR+Q ++ E + DPG+AD A Sbjct 121 YVVNGDIADVVVAVEDGRLSRWTRFSAQAVTTMDPTRRLARVQPQDAEAIGADPGLADKA 180 Query 185 AILLAAEQIGAAERCLQLTVEYAKSRVQFGRPIGSFQALKHRMADLYVTIAAARAVVADA 244 A+LLAAEQIGAAERCL+LTVEYAK RVQFGRPIGSFQALKHRMADLYVT+AAA+AVV+DA Sbjct 181 AVLLAAEQIGAAERCLELTVEYAKDRVQFGRPIGSFQALKHRMADLYVTVAAAKAVVSDA 240 Query 245 CHAPTPTNAATARLAASEALSTAAAEGIQLHGGIAITWEHDMHLYFKRAHGSAQLLESPR 304 C P+PTNAA ARLAA+EAL+T AAEGIQLHGGIAITWEHDMHLYFKRAHGSA LL++P+ Sbjct 241 CEDPSPTNAAAARLAATEALNTVAAEGIQLHGGIAITWEHDMHLYFKRAHGSAHLLDTPQ 300 Query 305 EVLRRLESEVWESP 318 E+L RLESEV+ +P Sbjct 301 ELLNRLESEVFNTP 314 >gi|183985021|ref|YP_001853312.1| acyl-CoA dehydrogenase FadE33 [Mycobacterium marinum M] gi|183178347|gb|ACC43457.1| acyl-CoA dehydrogenase FadE33 [Mycobacterium marinum M] Length=320 Score = 458 bits (1178), Expect = 5e-127, Method: Compositional matrix adjust. Identities = 260/309 (85%), Positives = 283/309 (92%), Gaps = 0/309 (0%) Query 5 EERQMLRETVASLVAKHAGPAAVRAAMASDRGYDESLWRLLCEQVGAAALVIPEELGGAG 64 EER+MLRETVA+LV KHA PAAVR+AM S+RGYDE+LWRLLCEQVGAAALVIPEELGGAG Sbjct 3 EEREMLRETVAALVNKHASPAAVRSAMESERGYDETLWRLLCEQVGAAALVIPEELGGAG 62 Query 65 GELADAAIVVQELGRALVPSPLLGTTLAELALLAAAKPDAQALTELAQGSAIGALVLDPD 124 GELADAAIV+QELGRALVPSPLLGTTLAELALLAAA+PDA+ L LA+GS+IGALVLDPD Sbjct 63 GELADAAIVLQELGRALVPSPLLGTTLAELALLAAAEPDAKTLAGLAEGSSIGALVLDPD 122 Query 125 YVVNGDIADIVVAATSGQLTRWTRFSAQPVATMDPTRRLARLQSEETEPLCPDPGIADTA 184 YV+NGD AD+VVA+T GQL+RWTRFSA VATMDPTRRLA+L++EET L DPG+AD A Sbjct 123 YVLNGDTADVVVASTEGQLSRWTRFSAHRVATMDPTRRLAQLRAEETAFLGEDPGLADAA 182 Query 185 AILLAAEQIGAAERCLQLTVEYAKSRVQFGRPIGSFQALKHRMADLYVTIAAARAVVADA 244 AILLAAEQIGAAERCL+LTVEYAKSRVQFGRPIGSFQALKHRMADLYV +AAARAVV +A Sbjct 183 AILLAAEQIGAAERCLELTVEYAKSRVQFGRPIGSFQALKHRMADLYVEVAAARAVVTEA 242 Query 245 CHAPTPTNAATARLAASEALSTAAAEGIQLHGGIAITWEHDMHLYFKRAHGSAQLLESPR 304 C APTPT+AATARLAA EAL AAEGIQLHGGIAITWEHDMHLYFKRAHGS LL SP Sbjct 243 CTAPTPTSAATARLAACEALCAVAAEGIQLHGGIAITWEHDMHLYFKRAHGSTHLLASPP 302 Query 305 EVLRRLESE 313 E+LRRLESE Sbjct 303 ELLRRLESE 311 >gi|296166609|ref|ZP_06849038.1| probable acyl-CoA dehydrogenase [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295898039|gb|EFG77616.1| probable acyl-CoA dehydrogenase [Mycobacterium parascrofulaceum ATCC BAA-614] Length=316 Score = 456 bits (1173), Expect = 2e-126, Method: Compositional matrix adjust. Identities = 256/312 (83%), Positives = 282/312 (91%), Gaps = 0/312 (0%) Query 5 EERQMLRETVASLVAKHAGPAAVRAAMASDRGYDESLWRLLCEQVGAAALVIPEELGGAG 64 +ER+MLRETVA+LVAKHA PAAVRAAM SDRGYDESLWRLLCEQVGAAALV+PEELGGAG Sbjct 3 DEREMLRETVAALVAKHANPAAVRAAMESDRGYDESLWRLLCEQVGAAALVVPEELGGAG 62 Query 65 GELADAAIVVQELGRALVPSPLLGTTLAELALLAAAKPDAQALTELAQGSAIGALVLDPD 124 GELADAA V+QELGR LVPSPLLGTTLAELALLAA +PDA+ L +LA+G++IGALVLDPD Sbjct 63 GELADAATVLQELGRGLVPSPLLGTTLAELALLAAPEPDAETLEKLAEGASIGALVLDPD 122 Query 125 YVVNGDIADIVVAATSGQLTRWTRFSAQPVATMDPTRRLARLQSEETEPLCPDPGIADTA 184 YVVNGDIAD+VVAA G+L+RWTR SAQPV TMDPTRRLAR+ TE + DPGI D A Sbjct 123 YVVNGDIADVVVAAADGRLSRWTRVSAQPVVTMDPTRRLARVTPAGTEEIGADPGIVDAA 182 Query 185 AILLAAEQIGAAERCLQLTVEYAKSRVQFGRPIGSFQALKHRMADLYVTIAAARAVVADA 244 AILL AEQIGAAERCL+LTVEY K+RVQFGRPIGSFQALKHRMADLYVTIAAA+AVVA+A Sbjct 183 AILLTAEQIGAAERCLELTVEYTKNRVQFGRPIGSFQALKHRMADLYVTIAAAKAVVAEA 242 Query 245 CHAPTPTNAATARLAASEALSTAAAEGIQLHGGIAITWEHDMHLYFKRAHGSAQLLESPR 304 C AP PTNAATARLAA+EAL AAAEGIQLHGGIAITWEHDMHLYFKRAHGSA LL +P+ Sbjct 243 CDAPGPTNAATARLAATEALCAAAAEGIQLHGGIAITWEHDMHLYFKRAHGSAHLLGTPQ 302 Query 305 EVLRRLESEVWE 316 ++L RLE+EV E Sbjct 303 QLLARLEAEVLE 314 >gi|118468142|ref|YP_890240.1| acyl-CoA dehydrogenase [Mycobacterium smegmatis str. MC2 155] gi|118169429|gb|ABK70325.1| putative acyl-CoA dehydrogenase [Mycobacterium smegmatis str. MC2 155] Length=311 Score = 425 bits (1092), Expect = 6e-117, Method: Compositional matrix adjust. Identities = 213/311 (69%), Positives = 254/311 (82%), Gaps = 2/311 (0%) Query 5 EERQMLRETVASLVAKHAGPAAVRAAMASDRGYDESLWRLLCEQVGAAALVIPEELGGAG 64 EER++LRETVA+LV KHA P AVRAAM S+ GYD +LWRLLCEQVGAAALVIPEE GGAG Sbjct 3 EERELLRETVAALVEKHASPEAVRAAMESELGYDPNLWRLLCEQVGAAALVIPEEFGGAG 62 Query 65 GELADAAIVVQELGRALVPSPLLGTTLAELALLAAAKPDAQALTELAQGSAIGALVLDPD 124 GELADAA+V++ELG+ALVP+PLLGTTLAE+ALL+ + + L ELA+G+ IG +V +P+ Sbjct 63 GELADAAVVLEELGKALVPTPLLGTTLAEIALLSVGR--TEPLEELAEGAKIGTVVFNPE 120 Query 125 YVVNGDIADIVVAATSGQLTRWTRFSAQPVATMDPTRRLARLQSEETEPLCPDPGIADTA 184 +V+NGDIADI++AA LT+W F+AQP TMD TRRLA + T L D G+ADTA Sbjct 121 FVINGDIADIMIAADGETLTQWDTFTAQPKPTMDMTRRLASVIPGATTTLGDDQGLADTA 180 Query 185 AILLAAEQIGAAERCLQLTVEYAKSRVQFGRPIGSFQALKHRMADLYVTIAAARAVVADA 244 A+L+AAEQIGAA RCL LTV Y+K RVQFGRPIGSFQALKHRMADLYV +A+ARAVV D+ Sbjct 181 ALLMAAEQIGAASRCLDLTVAYSKDRVQFGRPIGSFQALKHRMADLYVKVASARAVVHDS 240 Query 245 CHAPTPTNAATARLAASEALSTAAAEGIQLHGGIAITWEHDMHLYFKRAHGSAQLLESPR 304 P+ T+AA AR ASEALS +E +Q+HGGIAITWEHD+ LYFKRAHGSAQLL PR Sbjct 241 IATPSSTSAALARYFASEALSAVTSEAVQIHGGIAITWEHDIQLYFKRAHGSAQLLGPPR 300 Query 305 EVLRRLESEVW 315 E LRRLE+EV+ Sbjct 301 EQLRRLEAEVF 311 >gi|333992360|ref|YP_004524974.1| acyl-CoA dehydrogenase [Mycobacterium sp. JDM601] gi|333488328|gb|AEF37720.1| acyl-CoA dehydrogenase FadE33 [Mycobacterium sp. JDM601] Length=318 Score = 418 bits (1074), Expect = 6e-115, Method: Compositional matrix adjust. Identities = 223/318 (71%), Positives = 261/318 (83%), Gaps = 3/318 (0%) Query 1 MTPPEERQMLRETVASLVAKHAGPAAVRAAMASDRGYDESLWRLLCEQVGAAALVIPEEL 60 M EER +LR+TVA+LV KHA P AVRAAM S+RGYDE+LW++LCEQVGAAALV+PEEL Sbjct 1 MARNEERDLLRQTVAALVEKHAAPEAVRAAMESERGYDETLWQVLCEQVGAAALVVPEEL 60 Query 61 GGAGGELADAAIVVQELGRALVPSPLLGTTLAELALLAAAKPDAQALTELAQGSAIGALV 120 GGAGGEL DAA+V++ELG+ALVP+PLLGT LAELALLA +PDA AL +LA+G AIGA+V Sbjct 61 GGAGGELGDAAVVLEELGKALVPTPLLGTVLAELALLAGPEPDATALEQLAEGGAIGAVV 120 Query 121 LDPDYVVNGDI---ADIVVAATSGQLTRWTRFSAQPVATMDPTRRLARLQSEETEPLCPD 177 D DY VNGD+ D+VV QLTRWT F+A+PVATMDPTRRL R+ +E+T P+ D Sbjct 121 FDTDYAVNGDLVGAGDVVVGTDGDQLTRWTSFTAEPVATMDPTRRLGRVTAEQTAPIGAD 180 Query 178 PGIADTAAILLAAEQIGAAERCLQLTVEYAKSRVQFGRPIGSFQALKHRMADLYVTIAAA 237 PGIAD AAILLAAEQIGAA RCL LTV+Y K RVQFGRPIGSFQALKHRMADLYV ++AA Sbjct 181 PGIADCAAILLAAEQIGAATRCLDLTVQYTKDRVQFGRPIGSFQALKHRMADLYVAVSAA 240 Query 238 RAVVADACHAPTPTNAATARLAASEALSTAAAEGIQLHGGIAITWEHDMHLYFKRAHGSA 297 RAV+ DA P+ T+AA AR+ ASEA S A E +QLHGGIAITWE D+ LYFKRAHGS+ Sbjct 241 RAVIDDAIAEPSATSAALARVVASEAFSKVAGEAVQLHGGIAITWESDIQLYFKRAHGSS 300 Query 298 QLLESPREVLRRLESEVW 315 QLL P E LRRL++EV+ Sbjct 301 QLLGQPAEHLRRLQAEVF 318 >gi|145222069|ref|YP_001132747.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium gilvum PYR-GCK] gi|315446189|ref|YP_004079068.1| acyl-CoA dehydrogenase [Mycobacterium sp. Spyr1] gi|145214555|gb|ABP43959.1| acyl-CoA dehydrogenase domain protein [Mycobacterium gilvum PYR-GCK] gi|315264492|gb|ADU01234.1| acyl-CoA dehydrogenase [Mycobacterium sp. Spyr1] Length=313 Score = 414 bits (1064), Expect = 1e-113, Method: Compositional matrix adjust. Identities = 212/311 (69%), Positives = 254/311 (82%), Gaps = 0/311 (0%) Query 5 EERQMLRETVASLVAKHAGPAAVRAAMASDRGYDESLWRLLCEQVGAAALVIPEELGGAG 64 EER++LR+TVA+LV KHA P AVR A AS+RGYDE+LW +LCEQVGAAALV+PEELGGAG Sbjct 3 EERELLRDTVAALVEKHASPEAVRTAAASERGYDEALWTMLCEQVGAAALVVPEELGGAG 62 Query 65 GELADAAIVVQELGRALVPSPLLGTTLAELALLAAAKPDAQALTELAQGSAIGALVLDPD 124 GELADAA+V++ELG+ LVP+PLLGTTLAELALL+ PDA L LA+G++IG +V DP+ Sbjct 63 GELADAAVVLEELGKRLVPTPLLGTTLAELALLSVDAPDAALLEALAEGTSIGTVVFDPE 122 Query 125 YVVNGDIADIVVAATSGQLTRWTRFSAQPVATMDPTRRLARLQSEETEPLCPDPGIADTA 184 +VVNG++AD+V+ L+RWT F+A P MD TR LA L+ ET PL DPG+AD A Sbjct 123 HVVNGNVADVVIGTDGETLSRWTSFTATPSVAMDITRPLASLEVTETSPLGTDPGLADIA 182 Query 185 AILLAAEQIGAAERCLQLTVEYAKSRVQFGRPIGSFQALKHRMADLYVTIAAARAVVADA 244 AILLAAEQ+GAA +CL LTV+Y K RVQFGRPIGSFQALKHRMADLYV + +A+AVV +A Sbjct 183 AILLAAEQVGAASKCLDLTVQYTKDRVQFGRPIGSFQALKHRMADLYVAVQSAKAVVDEA 242 Query 245 CHAPTPTNAATARLAASEALSTAAAEGIQLHGGIAITWEHDMHLYFKRAHGSAQLLESPR 304 P+ T+AA ARLAA+EA S AAE +Q+HGGIAITWE D+ LYFKRAHGSAQLL PR Sbjct 243 VAEPSSTSAALARLAATEAFSKTAAEAVQMHGGIAITWESDIQLYFKRAHGSAQLLPPPR 302 Query 305 EVLRRLESEVW 315 E LRRLESEV+ Sbjct 303 EQLRRLESEVF 313 >gi|120406237|ref|YP_956066.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium vanbaalenii PYR-1] gi|119959055|gb|ABM16060.1| acyl-CoA dehydrogenase domain protein [Mycobacterium vanbaalenii PYR-1] Length=313 Score = 396 bits (1017), Expect = 2e-108, Method: Compositional matrix adjust. Identities = 217/311 (70%), Positives = 258/311 (83%), Gaps = 0/311 (0%) Query 5 EERQMLRETVASLVAKHAGPAAVRAAMASDRGYDESLWRLLCEQVGAAALVIPEELGGAG 64 EER +LR+TVA+LV KHA P AVR A AS+RGYDE+LW++LCEQVGAAALV+PEELGGAG Sbjct 3 EERDLLRDTVAALVDKHASPEAVRKAAASERGYDEALWKMLCEQVGAAALVVPEELGGAG 62 Query 65 GELADAAIVVQELGRALVPSPLLGTTLAELALLAAAKPDAQALTELAQGSAIGALVLDPD 124 GEL DAA+V++ELG+ LVP+PLLGTTLAELALL+ A+PDA+AL LA+G+AIG +V DP Sbjct 63 GELGDAAVVLEELGKGLVPTPLLGTTLAELALLSVAEPDAEALAALAEGAAIGTVVFDPG 122 Query 125 YVVNGDIADIVVAATSGQLTRWTRFSAQPVATMDPTRRLARLQSEETEPLCPDPGIADTA 184 YVVNG++AD+V+AA LTRW F+A P MD TR LA +++ ET PL DPG+ADTA Sbjct 123 YVVNGNVADVVIAADGDALTRWNAFTATPAVAMDITRPLAAVEATETSPLGADPGLADTA 182 Query 185 AILLAAEQIGAAERCLQLTVEYAKSRVQFGRPIGSFQALKHRMADLYVTIAAARAVVADA 244 AILLAAEQIGAA RCL+LTV+Y K RVQFGRPIGSFQALKHRMADLYV + +A+AVV +A Sbjct 183 AILLAAEQIGAATRCLELTVQYTKDRVQFGRPIGSFQALKHRMADLYVAVQSAKAVVDEA 242 Query 245 CHAPTPTNAATARLAASEALSTAAAEGIQLHGGIAITWEHDMHLYFKRAHGSAQLLESPR 304 PT T+AA ARLAA EA S AAE +Q+HGGIAITWE D+ LYFKRAHGSAQL PR Sbjct 243 VAEPTATSAALARLAAGEAFSKVAAEAVQMHGGIAITWESDIQLYFKRAHGSAQLFGPPR 302 Query 305 EVLRRLESEVW 315 E LRRLE++V+ Sbjct 303 EQLRRLEAQVF 313 >gi|108801660|ref|YP_641857.1| acyl-CoA dehydrogenase-like protein [Mycobacterium sp. MCS] gi|119870811|ref|YP_940763.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium sp. KMS] gi|126437646|ref|YP_001073337.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium sp. JLS] gi|108772079|gb|ABG10801.1| acyl-CoA dehydrogenase-like protein [Mycobacterium sp. MCS] gi|119696900|gb|ABL93973.1| acyl-CoA dehydrogenase domain protein [Mycobacterium sp. KMS] gi|126237446|gb|ABO00847.1| acyl-CoA dehydrogenase domain protein [Mycobacterium sp. JLS] Length=313 Score = 379 bits (972), Expect = 4e-103, Method: Compositional matrix adjust. Identities = 216/311 (70%), Positives = 256/311 (83%), Gaps = 0/311 (0%) Query 5 EERQMLRETVASLVAKHAGPAAVRAAMASDRGYDESLWRLLCEQVGAAALVIPEELGGAG 64 EER++LRETVA+LV KHA PAAVR AM S+RGYDESLW LLCEQVGAAALV+PEELGGAG Sbjct 3 EERELLRETVAALVDKHASPAAVREAMTSERGYDESLWTLLCEQVGAAALVVPEELGGAG 62 Query 65 GELADAAIVVQELGRALVPSPLLGTTLAELALLAAAKPDAQALTELAQGSAIGALVLDPD 124 GEL DAA+V++ELGR LVP+PLLGTTLAELALL++ +PDA AL LA G +GA+V DP Sbjct 63 GELGDAAVVLEELGRNLVPTPLLGTTLAELALLSSDEPDADALAGLAAGEQVGAVVFDPG 122 Query 125 YVVNGDIADIVVAATSGQLTRWTRFSAQPVATMDPTRRLARLQSEETEPLCPDPGIADTA 184 YVVNGDIAD+V+ + GQL+RWT F A P+ MD TRRLAR++ +T + DPG+ADTA Sbjct 123 YVVNGDIADVVIGVSDGQLSRWTSFEAHPLDAMDLTRRLARVEPGDTVAIGADPGLADTA 182 Query 185 AILLAAEQIGAAERCLQLTVEYAKSRVQFGRPIGSFQALKHRMADLYVTIAAARAVVADA 244 A+L AAEQIGAA RCL+LTV Y K RVQFGRPIGSFQALKHRMADLYV + +A+AVV +A Sbjct 183 ALLTAAEQIGAATRCLELTVAYTKDRVQFGRPIGSFQALKHRMADLYVKVQSAKAVVDEA 242 Query 245 CHAPTPTNAATARLAASEALSTAAAEGIQLHGGIAITWEHDMHLYFKRAHGSAQLLESPR 304 P+P +AA AR +ASEA + AAE +Q+HGGIAITWE D+ LYFKRAH SAQLL PR Sbjct 243 LAEPSPVSAALARFSASEAFTAVAAEAVQMHGGIAITWESDIQLYFKRAHASAQLLGPPR 302 Query 305 EVLRRLESEVW 315 E LRRLE++V+ Sbjct 303 EQLRRLETQVF 313 >gi|169627696|ref|YP_001701345.1| acyl-CoA dehydrogenase FadE [Mycobacterium abscessus ATCC 19977] gi|169239663|emb|CAM60691.1| Probable acyl-CoA dehydrogenase FadE [Mycobacterium abscessus] Length=317 Score = 376 bits (965), Expect = 3e-102, Method: Compositional matrix adjust. Identities = 197/314 (63%), Positives = 233/314 (75%), Gaps = 3/314 (0%) Query 1 MTPP--EERQMLRETVASLVAKHAGPAAVRAAMASDRGYDESLWRLLCEQVGAAALVIPE 58 M+P ERQMLR+TV SLV K A AAVR A S+RGYDE+LW +LCEQVGAAAL+IPE Sbjct 1 MSPSGNTERQMLRDTVRSLVTKRADSAAVRTAFESERGYDENLWAVLCEQVGAAALLIPE 60 Query 59 ELGGAGGELADAAIVVQELGRALVPSPLLGTTLAELALLAAAKPDAQALTELAQGSAIGA 118 E GGAGGELADAA+VV+ELGR LVPSPL+GT AELALL A + + L LA G +IGA Sbjct 61 ESGGAGGELADAAVVVEELGRGLVPSPLMGTLWAELALLEAGY-EGELLEALAAGESIGA 119 Query 119 LVLDPDYVVNGDIADIVVAATSGQLTRWTRFSAQPVATMDPTRRLARLQSEETEPLCPDP 178 + DP YVVNGDIAD+V+ + R + +A ++T+DPTRRLA + EP+ P Sbjct 120 VAFDPGYVVNGDIADVVLTVQGETVCRAGQVTALALSTLDPTRRLASIAVGAAEPVGTAP 179 Query 179 GIADTAAILLAAEQIGAAERCLQLTVEYAKSRVQFGRPIGSFQALKHRMADLYVTIAAAR 238 G+ D A +LLAAEQ+GAA R L LTVEY K+RVQFGR IGSFQALKHRMADLYV + +AR Sbjct 180 GLIDKAGLLLAAEQVGAAARALDLTVEYTKTRVQFGRAIGSFQALKHRMADLYVLVESAR 239 Query 239 AVVADACHAPTPTNAATARLAASEALSTAAAEGIQLHGGIAITWEHDMHLYFKRAHGSAQ 298 A V A H TP A AR+ ASEALS + + IQLHGGIAITWEHD HLYFKRAHGSA Sbjct 240 ATVYQAIHDLTPEGATVARIKASEALSAVSGDSIQLHGGIAITWEHDAHLYFKRAHGSAL 299 Query 299 LLESPREVLRRLES 312 LL +PR++L LE+ Sbjct 300 LLGTPRQLLPNLET 313 >gi|226363946|ref|YP_002781728.1| acyl-CoA dehydrogenase [Rhodococcus opacus B4] gi|226242435|dbj|BAH52783.1| putative acyl-CoA dehydrogenase [Rhodococcus opacus B4] Length=349 Score = 255 bits (652), Expect = 6e-66, Method: Compositional matrix adjust. Identities = 158/343 (47%), Positives = 196/343 (58%), Gaps = 42/343 (12%) Query 5 EERQMLRETVASLVAKHAGPAAVRAAMASDRGYDESLWRLLCEQVGAAALVIPEELGGAG 64 EER LRE+V L+ KH+ AAVR A+ ++ GYD +LW LCEQ+G AAL IPE+ G G Sbjct 6 EERAALRESVRDLLGKHSDSAAVRRAITTEHGYDGALWTKLCEQIGVAALAIPEKYDGVG 65 Query 65 GELADAAIVVQELGRALVPSPLLGT-TLAELALLAAAKPDAQA--LTELAQGSAIGALVL 121 L + +V +ELGR L PSP+LG+ LA AL+ + DA A L +A GS Sbjct 66 AALLEVHVVQEELGRTLTPSPMLGSAVLAAQALVLSGDDDACARLLPGIAAGSVAALCWA 125 Query 122 DPD-------------------YVVNGDIADIVVAATSGQLTRWTRFSAQP--------- 153 PD YV+ GD+AD+++ TS L F P Sbjct 126 GPDGWGGFGVTASGETLSGTASYVLGGDVADVLLVLTSDGL-----FEVDPSAEGVRRSR 180 Query 154 VATMDPTRRLARLQSEET------EPLCPDPGIADTAAILLAAEQIGAAERCLQLTVEYA 207 V+ MDPTR L+ + + P + A + L+AEQ+GAAE LQ TVEYA Sbjct 181 VSAMDPTRSLSEVTFDGVTARRLVSPTDLVEQLRTIALVALSAEQVGAAEAALQQTVEYA 240 Query 208 KSRVQFGRPIGSFQALKHRMADLYVTIAAARAVVADACHAPTPTNAATARLAASEALSTA 267 KSR QFGR IGSFQALKHRMAD+Y + AR++ A + T +A A++ SEAL Sbjct 241 KSRKQFGRVIGSFQALKHRMADMYALVETARSMSYAAALSGTHDDAVVAKVYCSEALQQV 300 Query 268 AAEGIQLHGGIAITWEHDMHLYFKRAHGSAQLLESPREVLRRL 310 AAE IQLHGGIAITWEHD LYFKRAHGSAQL PRE L L Sbjct 301 AAEAIQLHGGIAITWEHDAQLYFKRAHGSAQLFGQPREFLAEL 343 >gi|300785286|ref|YP_003765577.1| acyl-CoA dehydrogenase [Amycolatopsis mediterranei U32] gi|299794800|gb|ADJ45175.1| acyl-CoA dehydrogenase [Amycolatopsis mediterranei U32] gi|340526729|gb|AEK41934.1| acyl-CoA dehydrogenase [Amycolatopsis mediterranei S699] Length=345 Score = 244 bits (624), Expect = 9e-63, Method: Compositional matrix adjust. Identities = 156/348 (45%), Positives = 196/348 (57%), Gaps = 49/348 (14%) Query 5 EERQMLRETVASLVAKHAGPAAVRAAMASDRGYDESLWRLLCEQVGAAALVIPEELGGAG 64 EE + LR+ V +L+ + +GP AVRAA+ S GYD+ LW LCEQ+G AAL IPE GG G Sbjct 4 EEARALRDAVRALLTRRSGPEAVRAALESPLGYDDKLWSTLCEQIGVAALAIPEHYGGVG 63 Query 65 GELADAAIVVQELGRALVPSPLLGTTLAELALLAAAKPDAQALTELAQGSAIGALV---- 120 LA+A +V+ ELGR L P+P+LG+ + L DA A EL G A+G + Sbjct 64 AGLAEACVVLAELGRTLTPAPMLGSAVLSAQALLLTGNDA-ACGELLPGIAVGTTLAALA 122 Query 121 ------------------LDPD--YVVNGDIADIVVAATSG-----------QLTRWTRF 149 LD YV++GDIAD++VA + R R Sbjct 123 WSGADGRWTPALRASDAGLDGRACYVLDGDIADVLVAVARTDDGAGLFEVPVEAVRRER- 181 Query 150 SAQPVATMDPTRRLARLQSEETEPLCPDPG--------IADTAAILLAAEQIGAAERCLQ 201 V ++DP RRLA ++ D G + DTA + +AAEQ+GAA R L+ Sbjct 182 ----VTSLDPGRRLAVVECASAPARRLDTGGFAEPLRQLRDTATVAVAAEQVGAAARALE 237 Query 202 LTVEYAKSRVQFGRPIGSFQALKHRMADLYVTIAAARAVVADACHAPTPTNAATARLAAS 261 LTVEY K R QFGRPIGSFQALKHRMAD++V + AAR+ + A ATA++ Sbjct 238 LTVEYTKQRRQFGRPIGSFQALKHRMADVHVHVEAARSALYAALVDGDAEAVATAKVVCG 297 Query 262 EALSTAAAEGIQLHGGIAITWEHDMHLYFKRAHGSAQLLESPREVLRR 309 EA AAAE IQLHGGIAITWEHD HLYFKRAHG+A L P L R Sbjct 298 EAFEHAAAEMIQLHGGIAITWEHDAHLYFKRAHGTALLFGDPGAWLSR 345 >gi|111021563|ref|YP_704535.1| acyl-CoA dehydrogenase [Rhodococcus jostii RHA1] gi|110821093|gb|ABG96377.1| probable acyl-CoA dehydrogenase [Rhodococcus jostii RHA1] Length=349 Score = 239 bits (610), Expect = 5e-61, Method: Compositional matrix adjust. Identities = 152/343 (45%), Positives = 195/343 (57%), Gaps = 42/343 (12%) Query 5 EERQMLRETVASLVAKHAGPAAVRAAMASDRGYDESLWRLLCEQVGAAALVIPEELGGAG 64 EER LR +V L+ KH+ AAVR A+ ++ YD++LW LCEQ+G AAL +PE+ G G Sbjct 6 EERAALRSSVRDLLGKHSDSAAVRRAITTEHCYDDTLWSKLCEQIGVAALAVPEKYDGVG 65 Query 65 GELADAAIVVQELGRALVPSPLLGT-TLAELALLAAAKPDAQA--LTELAQG-------- 113 L + +V +ELGR L PSP+LG+ LA AL+ + DA A L +A G Sbjct 66 ASLLEVHVVQEELGRTLTPSPMLGSAVLAAQALVLSGDDDACARLLPGIAAGTVAALCWA 125 Query 114 -----SAIGA------LVLDPDYVVNGDIADIVVAATSGQLTRWTRFSAQPVA------- 155 S G L YV+ GD+AD+++ TS L F P A Sbjct 126 GADGWSGFGVTASGETLSGTASYVLGGDVADVLLVPTSAGL-----FEVDPAADGVTRRR 180 Query 156 --TMDPTRRLARLQSEET--EPLCPDPGIAD----TAAILLAAEQIGAAERCLQLTVEYA 207 MDPTR L+ + + L + D A + L+AEQ+GAA L+ TVEYA Sbjct 181 VPAMDPTRPLSEVVFDGVAARRLVSPTDLVDQLRTVALVALSAEQVGAASAALEQTVEYA 240 Query 208 KSRVQFGRPIGSFQALKHRMADLYVTIAAARAVVADACHAPTPTNAATARLAASEALSTA 267 KSR QFGR IGSFQALKHRMAD+Y + AR++ A + T +A A++ SEAL Sbjct 241 KSRKQFGRAIGSFQALKHRMADMYALVETARSMSYAAALSGTHEDAVIAKVYCSEALQHV 300 Query 268 AAEGIQLHGGIAITWEHDMHLYFKRAHGSAQLLESPREVLRRL 310 AAE +QLHGGIAITWEHD L+FKRAHGSAQL PRE L +L Sbjct 301 AAEAVQLHGGIAITWEHDAQLHFKRAHGSAQLFGQPREYLPQL 343 >gi|312138164|ref|YP_004005500.1| acyl-CoA dehydrogenase [Rhodococcus equi 103S] gi|311887503|emb|CBH46815.1| putative acyl-CoA dehydrogenase [Rhodococcus equi 103S] Length=373 Score = 239 bits (609), Expect = 6e-61, Method: Compositional matrix adjust. Identities = 162/364 (45%), Positives = 201/364 (56%), Gaps = 56/364 (15%) Query 5 EERQMLRETVASLVAKHAGPAAVRAAMASDRGYDESLWRLLCEQVGAAALVIPEELGGAG 64 EE+ LR+TVA L+AK A AA+R + S +D LW +LC+QVG AAL IPEE GG G Sbjct 4 EEQIELRKTVAQLLAKRADAAALRKTLESGEAFDRGLWDVLCQQVGVAALAIPEEFGGFG 63 Query 65 GELADAAIVVQELGRALVPSPLLGT-TLAELALLAAAKPDA--QALTELAQGSAIGALVL 121 L + +V++ELG AL PSP+ G+ LA A+LA +A + L +A+GS+I AL Sbjct 64 ATLVEQHLVLEELGAALTPSPMFGSAVLAAQAILATGNDEACERLLPGIAEGSSIAALCW 123 Query 122 -------------------DPD---------YVVNGDIAD--IVVAATSGQLTRWTRFSA 151 D D YV++G AD IV AA G F Sbjct 124 VGPEGHWRSDDVACTAAGSDADGYTVSGTAHYVLDGAHADVLIVAAAVEGSDGVIGLFEV 183 Query 152 QPVA---------TMDPTR--RLARLQSEETEPLCPDPGIA------DTAAILLAAEQIG 194 P A TMD TR L S L D A A + L+AEQ+G Sbjct 184 DPAAGGVARRQLPTMDLTRPMSLVEFDSAPAVRLTADDATAALEKVRTIAIVALSAEQVG 243 Query 195 AAERCLQLTVEYAKSRVQFGRPIGSFQALKHRMADLYVTIAAARAVVADACHAPT---PT 251 AAERC+Q+TV+Y+K RVQFGR IGSFQALKHRMADLY + AR+ A H+ + PT Sbjct 244 AAERCMQMTVDYSKDRVQFGRAIGSFQALKHRMADLYFLVETARSASYAAVHSLSEGLPT 303 Query 252 NAATARLA---ASEALSTAAAEGIQLHGGIAITWEHDMHLYFKRAHGSAQLLESPREVLR 308 AA A +A SEA + IQLHGGIAITWEHD HL+FKRAHGSAQLL P E + Sbjct 304 AAADALVAKAYCSEAFLAVTGDAIQLHGGIAITWEHDAHLFFKRAHGSAQLLGQPEEFFK 363 Query 309 RLES 312 +E+ Sbjct 364 EMET 367 >gi|325674932|ref|ZP_08154619.1| acyl-CoA dehydrogenase [Rhodococcus equi ATCC 33707] gi|325554518|gb|EGD24193.1| acyl-CoA dehydrogenase [Rhodococcus equi ATCC 33707] Length=393 Score = 238 bits (606), Expect = 1e-60, Method: Compositional matrix adjust. Identities = 162/364 (45%), Positives = 201/364 (56%), Gaps = 56/364 (15%) Query 5 EERQMLRETVASLVAKHAGPAAVRAAMASDRGYDESLWRLLCEQVGAAALVIPEELGGAG 64 EE+ LR+TVA L+AK A AA+R + S +D LW +LC+QVG AAL IPEE GG G Sbjct 24 EEQIELRKTVAQLLAKRADAAALRKTLESGEAFDRGLWDVLCQQVGVAALAIPEEFGGFG 83 Query 65 GELADAAIVVQELGRALVPSPLLGT-TLAELALLAAAKPDA--QALTELAQGSAIGALVL 121 L + +V++ELG AL PSP+ G+ LA A+LA +A + L +A+GS+I AL Sbjct 84 ATLVEQHLVLEELGAALTPSPMFGSAVLAAQAILATGNDEACERLLPGIAEGSSIAALCW 143 Query 122 -------------------DPD---------YVVNGDIAD--IVVAATSGQLTRWTRFSA 151 D D YV++G AD IV AA G F Sbjct 144 VGPEGHWRSDDVACTAAGSDADGYTVSGTAHYVLDGAHADVLIVAAAVEGSDGVIGLFEV 203 Query 152 QPVA---------TMDPTR--RLARLQSEETEPLCPDPGIA------DTAAILLAAEQIG 194 P A TMD TR L S L D A A + L+AEQ+G Sbjct 204 DPAAGGVARRQLPTMDLTRPMSLVEFDSAPAVRLTADDATAALEKVRTIAIVALSAEQVG 263 Query 195 AAERCLQLTVEYAKSRVQFGRPIGSFQALKHRMADLYVTIAAARAVVADACHAPT---PT 251 AAERC+Q+TV+Y+K RVQFGR IGSFQALKHRMADLY + AR+ A H+ + PT Sbjct 264 AAERCMQMTVDYSKDRVQFGRAIGSFQALKHRMADLYFLVETARSASYAAVHSLSEGLPT 323 Query 252 NAATARLA---ASEALSTAAAEGIQLHGGIAITWEHDMHLYFKRAHGSAQLLESPREVLR 308 AA A +A SEA + IQLHGGIAITWEHD HL+FKRAHGSAQLL P E + Sbjct 324 AAADALVAKAYCSEAFLAVTGDAIQLHGGIAITWEHDAHLFFKRAHGSAQLLGQPEEFFK 383 Query 309 RLES 312 +E+ Sbjct 384 EMET 387 >gi|226304375|ref|YP_002764333.1| acyl-CoA dehydrogenase [Rhodococcus erythropolis PR4] gi|226183490|dbj|BAH31594.1| putative acyl-CoA dehydrogenase [Rhodococcus erythropolis PR4] Length=350 Score = 233 bits (594), Expect = 3e-59, Method: Compositional matrix adjust. Identities = 145/340 (43%), Positives = 186/340 (55%), Gaps = 35/340 (10%) Query 5 EERQMLRETVASLVAKHAGPAAVRAAMASDRGYDESLWRLLCEQVGAAALVIPEELGGAG 64 E++ LR +V L++KH+ AAVRAA+ ++ GYD +LW LCEQ+G AAL IPEE G G Sbjct 6 EDQAALRASVRDLLSKHSDSAAVRAAITTEIGYDAALWSKLCEQIGVAALAIPEEFDGVG 65 Query 65 GELADAAIVVQELGRALVPSPLLGTTLAELALLAAAKPDAQALTELAQGSAIG------- 117 L + +V +ELGR L PSP+LG+ + L + D A + L G A G Sbjct 66 AGLGEVHVVQEELGRTLTPSPMLGSAILAAQALLLSGDD-DACSRLLPGVASGESTLALC 124 Query 118 -----------------ALVLDPDYVVNGDIADIVVAATSGQLTRWT----RFSAQPVAT 156 AL+ YV++G IAD ++ T+ S + V T Sbjct 125 WAGAAGWSTFGVEATEDALIGTASYVLDGHIADTLLVLTADGFYEVDPAAEGVSRRRVPT 184 Query 157 MDPTRRLAR--LQSEETEPLCPDPGIAD----TAAILLAAEQIGAAERCLQLTVEYAKSR 210 MDPTR LA PL + D I L+AEQ+GAA ++ TVEY KSR Sbjct 185 MDPTRTLAEVTFSGVRGRPLEWSEDLVDRIRTVVLIALSAEQVGAAAAIVEQTVEYTKSR 244 Query 211 VQFGRPIGSFQALKHRMADLYVTIAAARAVVADACHAPTPTNAATARLAASEALSTAAAE 270 QFGR IGSFQALKHRMAD+Y + AR++ A + +AA A++ SEAL +E Sbjct 245 KQFGRAIGSFQALKHRMADMYTLVETARSMTYAAVATQSADDAAVAKVYCSEALQQITSE 304 Query 271 GIQLHGGIAITWEHDMHLYFKRAHGSAQLLESPREVLRRL 310 +QLHGGIAITWEHD LYFKRAHGSAQL P L L Sbjct 305 AVQLHGGIAITWEHDAQLYFKRAHGSAQLFGQPSTYLPSL 344 >gi|229494614|ref|ZP_04388377.1| acyl-CoA dehydrogenase domain protein [Rhodococcus erythropolis SK121] gi|229318976|gb|EEN84834.1| acyl-CoA dehydrogenase domain protein [Rhodococcus erythropolis SK121] Length=350 Score = 231 bits (589), Expect = 1e-58, Method: Compositional matrix adjust. Identities = 144/340 (43%), Positives = 185/340 (55%), Gaps = 35/340 (10%) Query 5 EERQMLRETVASLVAKHAGPAAVRAAMASDRGYDESLWRLLCEQVGAAALVIPEELGGAG 64 E++ LR +V L++KH+ AAVRAA+ ++ GYD +LW LCEQ+G AAL IPEE G G Sbjct 6 EDQAALRASVRDLLSKHSDSAAVRAAITTEIGYDAALWSKLCEQIGVAALAIPEEFDGVG 65 Query 65 GELADAAIVVQELGRALVPSPLLGTTLAELALLAAAKPDAQALTELAQGSAIG------- 117 L + +V +ELGR L PSP+LG+ + L + D A + L G A G Sbjct 66 AGLGEVHVVQEELGRTLTPSPMLGSAILAAQALLLSG-DNDACSRLLPGVASGESTLALC 124 Query 118 -----------------ALVLDPDYVVNGDIADIVVAATSGQLTRWT----RFSAQPVAT 156 AL YV++G +AD ++ T+ S + V T Sbjct 125 WAGAAGWSTFGVEATEDALTGTASYVLDGHVADTLLVLTADGFYEVDPAAEGVSRRRVPT 184 Query 157 MDPTRRLAR--LQSEETEPLCPDPGIAD----TAAILLAAEQIGAAERCLQLTVEYAKSR 210 MDPTR LA PL + D I L+AEQ+GAA ++ TVEY KSR Sbjct 185 MDPTRTLAEVTFSGVRGRPLEWSEDLVDRIRTVVLIALSAEQVGAAAAIVEQTVEYTKSR 244 Query 211 VQFGRPIGSFQALKHRMADLYVTIAAARAVVADACHAPTPTNAATARLAASEALSTAAAE 270 QFGR IGSFQALKHRMAD+Y + AR++ A + +AA A++ SEAL +E Sbjct 245 KQFGRAIGSFQALKHRMADMYTLVETARSMTYAAVATQSADDAAVAKVYCSEALQQITSE 304 Query 271 GIQLHGGIAITWEHDMHLYFKRAHGSAQLLESPREVLRRL 310 +QLHGGIAITWEHD LYFKRAHGSAQL P L L Sbjct 305 AVQLHGGIAITWEHDAQLYFKRAHGSAQLFGQPSTYLPSL 344 >gi|54022443|ref|YP_116685.1| putative acyl-CoA dehydrogenase [Nocardia farcinica IFM 10152] gi|54013951|dbj|BAD55321.1| putative acyl-CoA dehydrogenase [Nocardia farcinica IFM 10152] Length=351 Score = 224 bits (571), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 152/345 (45%), Positives = 198/345 (58%), Gaps = 45/345 (13%) Query 6 ERQMLRETVASLVAKHAGPAAVRAAMASDRGYDESLWRLLCEQVGAAALVIPEELGGAGG 65 E + ++V +L+ KHA PAAVRAAM +D GYD +LWRLLCEQ+G AAL IPEE GG G Sbjct 5 ELKEFADSVRALLGKHAQPAAVRAAMDTDLGYDPALWRLLCEQIGVAALAIPEEYGGIGA 64 Query 66 ELADAAIVVQELGRALVPSPLLGT-TLAELALLAAAKPDAQA--LTELAQGSAIGALVL- 121 L ++ +VV ELGR L P+LG+ L ALL + +A A L E+A+G A+ Sbjct 65 SLVESLLVVGELGRTLAGVPMLGSAVLGAQALLLSGDDEACARLLPEVAEGGRTLAVCWA 124 Query 122 ------DPDYVVNGDIAD-----IVVAATSGQLTRWTR------------FSAQPVATMD 158 +P G+ ++ AA +G L T + + V T+D Sbjct 125 GPRGWDEPGVRAGGESLSGTAHYVLDAAGAGTLIVVTTEGLFEVAADAEGVARRVVPTLD 184 Query 159 PTRRLARLQSEETEPLCPDPGIADTAAIL----------LAAEQIGAAERCLQLTVEYAK 208 PTR+LA + E G D A ++ +AAEQ+GAA+RCL++TVEY K Sbjct 185 PTRKLAEITFAEVP--ARRLGTGDPAPVMARLREVAWAAVAAEQVGAAQRCLEMTVEYTK 242 Query 209 SRVQFGRPIGSFQALKHRMADLYVTIAAARAV--VADACHAPTPTNAA----TARLAASE 262 SRVQFGRPIGSFQALKHRMAD+YV + +A++ +A A +AA AR S Sbjct 243 SRVQFGRPIGSFQALKHRMADMYVLVESAKSASRLATESVATGAESAAEDVWVARAQCSR 302 Query 263 ALSTAAAEGIQLHGGIAITWEHDMHLYFKRAHGSAQLLESPREVL 307 A + AE +Q+HGGIAITWEHD HL+FKRAHG AQL R L Sbjct 303 AFTDVVAETVQMHGGIAITWEHDAHLFFKRAHGDAQLFGPARRPL 347 >gi|333918611|ref|YP_004492192.1| acyl-CoA dehydrogenase [Amycolicicoccus subflavus DQS3-9A1] gi|333480832|gb|AEF39392.1| Acyl-CoA dehydrogenase [Amycolicicoccus subflavus DQS3-9A1] Length=381 Score = 221 bits (564), Expect = 8e-56, Method: Compositional matrix adjust. Identities = 152/368 (42%), Positives = 191/368 (52%), Gaps = 70/368 (19%) Query 5 EERQMLRETVASLVAKHAGPAAVRAAMASDRGYDESLWRLLCEQVGAAALVIPEELGGAG 64 ER L TV S++A+ + RAA S GY+ LW LC QVG AAL IPEE GG G Sbjct 10 HERLELGRTVRSVLARKSSFEKTRAAATSPAGYNTELWSTLCGQVGVAALAIPEEYGGLG 69 Query 65 GELADAAIVVQELGRALVPSPLLGTT-LAELALLAAAKPDAQA--LTELAQGSAIGALVL 121 + + IV +ELGR L P+P LG++ LA +L+ A DA L +A G+A L Sbjct 70 AGIRELQIVAEELGRGLTPTPFLGSSVLAARSLVHCADEDANRRLLPPIAHGTATATLAW 129 Query 122 D----------------------------PDYVVNGDIADIV--VAATSGQLTRWTRFSA 151 +YV++GD AD V +A G+ + F Sbjct 130 TGVDGQWRTDSAAFRAEHCGEGSYHLSGTAEYVLDGDTADCVLAIAHIDGENEQIGLFEV 189 Query 152 QPVA---------TMDPTRRLA----------RLQSEETEPLCPDPGIADTAAILLAAEQ 192 A TMD TRRLA R+ + + EP + D +LAAEQ Sbjct 190 DIRAPGVVRTATPTMDSTRRLASVALTRAVAKRIGTADFEPALNQ--VRDEVYAVLAAEQ 247 Query 193 IGAAERCLQLTVEYAKSRVQFGRPIGSFQALKHRMADLYVTIAAARAVVADACHA----- 247 IGAA++ L TV Y+K RVQFGRPIGSFQALKHRMADLYV + +ARA +A Sbjct 248 IGAADQALADTVSYSKERVQFGRPIGSFQALKHRMADLYVFVESARAACYEAADVLDGRG 307 Query 248 ----------PTPTNAA-TARLAASEALSTAAAEGIQLHGGIAITWEHDMHLYFKRAHGS 296 P AA AR+A +E L+T AAE IQ+HGG+AITWEH+ HLYFKRAH S Sbjct 308 EPAGYLEESEPASARAALVARIACTETLTTVAAEMIQVHGGVAITWEHNAHLYFKRAHSS 367 Query 297 AQLLESPR 304 +QL PR Sbjct 368 SQLFGQPR 375 >gi|262200923|ref|YP_003272131.1| acyl-CoA dehydrogenase domain-containing protein [Gordonia bronchialis DSM 43247] gi|262084270|gb|ACY20238.1| acyl-CoA dehydrogenase domain protein [Gordonia bronchialis DSM 43247] Length=373 Score = 210 bits (535), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 141/335 (43%), Positives = 179/335 (54%), Gaps = 43/335 (12%) Query 14 VASLVAKHAGPAAVRAAMASDRGYDESLWRLLCEQVGAAALVIPEELGGAGGELADAAIV 73 + L+ + A+VR+AM D LWR LC ++G AAL IPEE GGAG A+ A V Sbjct 24 IRELIKRRGDSASVRSAMRGTPRMDRDLWRTLCTEIGVAALPIPEEYGGAGATFAETAAV 83 Query 74 VQELGRALVPSPLLGT-TLAELALLAAAKPDA--QALTELAQGSAI-------------- 116 ++ELG AL P P+ G+ LA +L A D + L LA G I Sbjct 84 LEELGSALSPVPVFGSAVLATATILLADDADTSQRLLPHLASGERIAAVCWADATGWERI 143 Query 117 ------GALVLDPDYVVNGDIAD-IVVAATSGQL-------TRWTRFSAQPVATMDPTRR 162 G L YVV+G+ AD ++V A+SG+ T S P+ TMDPTR Sbjct 144 GVRADAGLLTGTAHYVVDGEAADTLLVFASSGEQVTLHAVDTTADGVSVTPLPTMDPTRP 203 Query 163 LARLQSEET-EPLCPDPG-----IADTAAILLAAEQIGAAERCLQLTVEYAKSRVQFGRP 216 L + +E PG + A LL+AEQ+G A+ L TVEY K+R QFGR Sbjct 204 LGAVHFDEAPSATIAAPGDLPHRLRTIAWALLSAEQVGGAQAALDRTVEYTKARKQFGRT 263 Query 217 IGSFQALKHRMADLYVTIAAARAVVADACHAPTPTNAATARLA------ASEALSTAAAE 270 IGSFQALKHR+AD+YV + AR++ A A + A LA SEA + E Sbjct 264 IGSFQALKHRIADMYVQVETARSISRAAVDAVVTGDPAADELAVAAHVYCSEAFKSVTGE 323 Query 271 GIQLHGGIAITWEHDMHLYFKRAHGSAQLLESPRE 305 IQLHGGI ITWEHD+ LYFKRAHGSAQLL +P + Sbjct 324 AIQLHGGIGITWEHDIQLYFKRAHGSAQLLGAPHQ 358 >gi|119716995|ref|YP_923960.1| acyl-CoA dehydrogenase domain-containing protein [Nocardioides sp. JS614] gi|119537656|gb|ABL82273.1| acyl-CoA dehydrogenase domain protein [Nocardioides sp. JS614] Length=323 Score = 201 bits (512), Expect = 9e-50, Method: Compositional matrix adjust. Identities = 145/321 (46%), Positives = 182/321 (57%), Gaps = 35/321 (10%) Query 5 EERQMLRETVASLVAKHAGPAAVRAAMASDRGYDESLWRLLCEQVGAAALVIPEELGGAG 64 EE+Q L TV L+AK A P RAA +DE+LW+ LCEQ+G AAL IPEE GGAG Sbjct 7 EEQQELAATVRGLLAKRADP---RAA-----SFDEALWQTLCEQIGVAALGIPEEYGGAG 58 Query 65 GELADAAIVVQELGRALVPSPLLGTTLAELALLAAAKPDAQA--LTELAQGS-AIGALVL 121 L +A + ++E+GR+L PSPLLG+ LA ALLA A DA+ L LA G A Sbjct 59 FTLFEALVALEEVGRSLAPSPLLGSLLASEALLAGADEDAKQRLLPRLAAGEVGALADGA 118 Query 122 DPDYVVNGDIADIVVAATSGQLTRWTRFSAQP-------VATMDPTRRLARLQSEETEP- 173 D V++GD A ++V AT L F P +MD T RLA ++S+ + Sbjct 119 DAADVLDGDHAAVLVVATDDGL-----FEVAPETADRSWTPSMDQTIRLATVRSDLSAAT 173 Query 174 -LCPDPGIADTA----AILLAAEQIGAAERCLQLTVEYAKSRVQFGRPIGSFQALKHRMA 228 + P D A A+ A +G A R L++TV Y+K RVQFGRPIGSFQALKHRMA Sbjct 174 RVGAGPAARDRARLVGAVGCATLAVGGAARALEMTVAYSKERVQFGRPIGSFQALKHRMA 233 Query 229 DLYVTIAAARAVVADACHAPTPTN------AATARLAASEALSTAAAEGIQLHGGIAITW 282 D++V + AR+ A +A A A+ SEA + A E +QLHGGIAITW Sbjct 234 DMHVRLEMARSASWAASYAVAAGTDDAEQLAHVAKAYCSEAFANIAGETVQLHGGIAITW 293 Query 283 EHDMHLYFKRAHGSAQLLESP 303 EHD HL KRAH QL P Sbjct 294 EHDAHLVLKRAHALGQLYGPP 314 >gi|296141511|ref|YP_003648754.1| acyl-CoA dehydrogenase domain-containing protein [Tsukamurella paurometabola DSM 20162] gi|296029645|gb|ADG80415.1| acyl-CoA dehydrogenase domain protein [Tsukamurella paurometabola DSM 20162] Length=350 Score = 201 bits (512), Expect = 9e-50, Method: Compositional matrix adjust. Identities = 142/340 (42%), Positives = 180/340 (53%), Gaps = 39/340 (11%) Query 6 ERQMLRETVASLVAKHAGPAAVRAAMASDRGYDESLWRLLCEQVGAAALVIPEELGGAGG 65 E + L V S++ + AA+R A+ + GYD LW +L +QVG AAL +PE GG G Sbjct 4 ELEDLAAAVRSVLDRRWSDAALRTAIDTPAGYDTGLWSVLSDQVGVAALAVPEAAGGMGA 63 Query 66 ELADAAIVVQELGRALVPSPLLGTTLAELALLAAAKPDAQALTELAQGSAIGALVL---- 121 + V +ELGR LVPSP LG+ + ++L L +LA G+ + Sbjct 64 GVRALQSVAEELGRRLVPSPFLGSAVLATSVLNGTGA-CDLLGDLASGTRTATVAFAGRA 122 Query 122 ---------------DPDYVVNGDIAD-IVVAATSGQ---LTRWTRFSA--QPVATMDPT 160 +V++GD AD +++AA G L R R A + T+DPT Sbjct 123 FTDRPLIMSGGRVSGTACFVLDGDTADDLLLAARDGGRLVLLRADRGVAHRRHTPTLDPT 182 Query 161 RRLARLQSEETEP--LCPDPGIA-----DTAAILLAAEQIGAAERCLQLTVEYAKSRVQF 213 RRLA + + L D A D +LAAEQ+GAAE L+ TVEY +SRVQF Sbjct 183 RRLAEVTVDRASGTVLLDDAEAALAHALDVTCAVLAAEQVGAAEHALRSTVEYTRSRVQF 242 Query 214 GRPIGSFQALKHRMADLYVTIAAARAVVA------DACHAPTPTNAATARLAASEALSTA 267 GR IGSFQALKHRMAD++V + AAR+ D P ATA+ SEA Sbjct 243 GRAIGSFQALKHRMADMFVLVEAARSAAYAAGESLDRADPDAPQAVATAKAYCSEAFQAV 302 Query 268 AAEGIQLHGGIAITWEHDMHLYFKRAHGSAQLLESPREVL 307 AAE IQLHGGI ITWEHD HLYFKRAHGSA L P L Sbjct 303 AAEMIQLHGGIGITWEHDAHLYFKRAHGSAHLFGDPASFL 342 >gi|145595144|ref|YP_001159441.1| acyl-CoA dehydrogenase domain-containing protein [Salinispora tropica CNB-440] gi|145304481|gb|ABP55063.1| acyl-CoA dehydrogenase domain protein [Salinispora tropica CNB-440] Length=366 Score = 199 bits (506), Expect = 5e-49, Method: Compositional matrix adjust. Identities = 139/355 (40%), Positives = 188/355 (53%), Gaps = 46/355 (12%) Query 6 ERQMLRETVASLVAKHAGPAAVRAAMASDRGYDESLWRLLCEQVGAAALVIPEELGGAGG 65 E+Q LR +V ++++H ++ S G D LW++LC Q+G A L +PE GG G Sbjct 4 EQQALRMSVRGVLSRHTADRSIADVTESSAGDDAELWQVLCGQIGVAGLAVPERFGGLGA 63 Query 66 ELADAAIVVQELGRALVPSPLLGT-TLAELALLAAAKPDA--QALTELAQGSAIGALVL- 121 L + +V+ ELGR L P+P+LG LA A+L A A + L +L G + AL Sbjct 64 GLGEVHVVLDELGRTLTPTPMLGCAVLAGQAVLHAEDEAACRRILPDLVSGELLAALAWT 123 Query 122 ------DPD-----------------YVVNGDIADIV-VAATSGQLTRWTRFS------- 150 DP YV++ +AD++ VAA + + R Sbjct 124 DQHGDWDPHRPAYSATKAGRLTGEAHYVLDVHLADVLLVAAGTSEGVRLFEVDPRGAGVR 183 Query 151 AQPVATMDPTRRLA-----RLQSEETEPLCPDPGIADTAAILLAAEQIGAAERCLQLTVE 205 +PV T+D TRRL + + + P + D A + L+AEQ+GAA R L+LTV Sbjct 184 RRPVTTVDLTRRLGVVVLDQALGRQLGGVNPLERVRDIACVALSAEQVGAAARALELTVA 243 Query 206 YAKSRVQFGRPIGSFQALKHRMADLYVTIAAAR-----AVVADACHAP-TPTNAATARLA 259 +A +RVQFGRPIG FQA+ HR+ADL+V + +AR AV + AP AA A + Sbjct 244 HALTRVQFGRPIGGFQAIAHRLADLHVVVESARSLSYAAVSSLDSDAPEAHLLAAGAAVH 303 Query 260 ASEALSTAAAEGIQLHGGIAITWEHDMHLYFKRAHGSAQLLESPREVLRRLESEV 314 +EAL AE IQLHGGI ITWEHD H YFKRAHG+A L PR L RL V Sbjct 304 CAEALEQVTAEMIQLHGGIGITWEHDAHRYFKRAHGAAHLFGHPRAHLARLAEAV 358 >gi|254774665|ref|ZP_05216181.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium avium subsp. avium ATCC 25291] gi|254822241|ref|ZP_05227242.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium intracellulare ATCC 13950] Length=366 Score = 197 bits (500), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 132/365 (37%), Positives = 189/365 (52%), Gaps = 51/365 (13%) Query 3 PPEERQMLRETVASLVAKHAGPAAVRAAMASDRGYDESLWRLLCEQVGAAALVIPEELGG 62 P E LR V ++ + VR MA+D GYDE+ WR + ++G +V+PE GG Sbjct 2 PSSEVDELRSVVRDYLSATSPSETVRKLMATDIGYDEASWRQMAGELGLQGIVVPERWGG 61 Query 63 AGGELADAAIVVQELGRALVPSPLLGTT-LAELALLAAAKPDA--QALTELAQGSAIGAL 119 AG + + A+V +E+GRALV SP T LA A+LA+ A + + GS L Sbjct 62 AGAGVVELAVVFEEMGRALVCSPFFATVALATQAILASEDDAAVERFVPGFVDGSTTATL 121 Query 120 VL-------DPD--------------------YVVNGDIADIVVA--ATSGQLTRWT--- 147 +L DPD V++G AD+V+A T ++ + Sbjct 122 ILNGQLGAWDPDAVTLRADRRGAGYRIRGEAPLVIDGHTADVVLAPAITDAGVSLFAVRA 181 Query 148 ---RFSAQPVATMDPTRRLARLQSEET--EPLCPDPGIA-------DTAAILLAAEQIGA 195 P+A +D TR++AR+Q + E + D G A D A + L AEQ+GA Sbjct 182 GPEGLCRTPLAGLDRTRKVARVQFDGAPAELIGTDGGAANFLARTSDLALVALTAEQVGA 241 Query 196 AERCLQLTVEYAKSRVQFGRPIGSFQALKHRMADLYVTIAAARAVVADACHA----PTPT 251 A+RCL + V+YAK+R+QFGRPIGSFQA+KHR AD+ V + AR+ + A PT Sbjct 242 AQRCLDMAVDYAKNRIQFGRPIGSFQAVKHRCADMLVQVEGARSAQSHAAAVAGTDDLPT 301 Query 252 NAATARLAASEALSTAAAEGIQLHGGIAITWEHDMHLYFKRAHGSAQLLESPREVLRRLE 311 A+ A++ SEA A + +++HGGI TWEHD HLY +RA S + P +RL Sbjct 302 AASVAKMVCSEAFLQVALDNMRIHGGIGFTWEHDAHLYVRRAKASQLIFGDPDYHAQRLA 361 Query 312 SEVWE 316 + V E Sbjct 362 TLVSE 366 >gi|302528338|ref|ZP_07280680.1| pimeloyl-CoA dehydrogenase, small subunit [Streptomyces sp. AA4] gi|302437233|gb|EFL09049.1| pimeloyl-CoA dehydrogenase, small subunit [Streptomyces sp. AA4] Length=352 Score = 196 bits (498), Expect = 4e-48, Method: Compositional matrix adjust. Identities = 140/346 (41%), Positives = 184/346 (54%), Gaps = 38/346 (10%) Query 5 EERQMLRETVASLVAKHAGPAAVRAAMASDRGYDESLWRLLCEQVGAAALVIPEELGGAG 64 +E++ L V LVA+ A +RAA+ S GYD LW LCEQ+G AAL IPEE GGAG Sbjct 7 DEQRELAAAVRGLVARRAAKTDLRAAIDSPSGYDTELWSALCEQIGVAALAIPEEYGGAG 66 Query 65 GELADAAIVVQELGRALVPSPLLGTTLAELALLAAAKPDAQALTELAQGSAI-------- 116 L + +V++ELG +L PSPLLG+ + L AA + L E+A G + Sbjct 67 FSLFETHVVLEELGASLTPSPLLGSGVLAAQALLAADA-PELLPEIAAGEVVALAWADSA 125 Query 117 ------GALVLDPDYVVNGDIADIVVAATSGQLT-------RWTRFSAQPVA----TMDP 159 G+ V+ +NG ++ A + L R F A A +D Sbjct 126 GRHRTDGSDVVASGGTLNGTATLVLDGAQASHLLVLAMADGRPALFQADATAEATPAVDQ 185 Query 160 TRRLARLQSEETEP--LCPD-----PGIADTAAILLAAEQIGAAERCLQLTVEYAKSRVQ 212 T R A+++ +T L D P + AAI A Q+G A+ CL TV + K R Q Sbjct 186 TLRFAKVEFRDTPATLLAADFTEALPRLHALAAIACTALQVGGAQSCLDRTVAHLKEREQ 245 Query 213 FGRPIGSFQALKHRMADLYVTIAAARAVVADACHAPTPTN-----AATARLAASEALSTA 267 FGRP+GSFQALKHR+AD+ V + AR++ A A + + AA A+ SEA + Sbjct 246 FGRPLGSFQALKHRVADMLVQVETARSMSWAAGFAASNGDDVVQQAAYAKSWCSEAFTAV 305 Query 268 AAEGIQLHGGIAITWEHDMHLYFKRAHGSAQLLESPREVLRRLESE 313 AAE +QLHGGIAITWEHD LYFKRAH AQL RE RL S+ Sbjct 306 AAETVQLHGGIAITWEHDAQLYFKRAHALAQLFGDAREHRARLRSD 351 >gi|326328932|ref|ZP_08195263.1| putative acyl-CoA dehydrogenase [Nocardioidaceae bacterium Broad-1] gi|325953275|gb|EGD45284.1| putative acyl-CoA dehydrogenase [Nocardioidaceae bacterium Broad-1] Length=317 Score = 192 bits (489), Expect = 4e-47, Method: Compositional matrix adjust. Identities = 136/312 (44%), Positives = 173/312 (56%), Gaps = 21/312 (6%) Query 5 EERQMLRETVASLVAKHAGPAAVRAAMASDRGYDESLWRLLCEQVGAAALVIPEELGGAG 64 EE+ L TV +L+AK A RAA+AS GYD +LW+ L EQ+G AL +PE GG G Sbjct 7 EEQTDLVATVHTLIAKRAASMDRRAAIASPEGYDTTLWQTLTEQIGVTALAVPEAYGGVG 66 Query 65 GELADAAIVVQELGRALVPSPLLGTTLAELALLAAAKPDAQALTE-LAQGSAIGALVLDP 123 +A +V++ELG L PSP +GT LA L A A L E +A G+ A+V Sbjct 67 CTYIEAHLVLEELGATLTPSPFVGTLLATQVLAAVGTAAAGELLERIAAGTTAAAVVPGS 126 Query 124 DYVVNGDIADIVVAATSGQLTRWTRFSAQPVAT-------MDPTRRLARLQSEE-TEPL- 174 D VV+ A+I++ Q+ + P A MDPT R A + + +P+ Sbjct 127 DLVVDAVGAEILLVLRGDQV-----HAVDPSAVTVTETPAMDPTWRFATVTVDAPGDPIG 181 Query 175 CPDPGIADT-AAILLAAEQIGAAERCLQLTVEYAKSRVQFGRPIGSFQALKHRMADLYVT 233 DP A T A ++ A Q GAA L+ TV Y K R QFGRP+GSFQALKHR ADL V Sbjct 182 TVDPAYATTVGATMMTALQAGAAREALERTVAYLKERHQFGRPLGSFQALKHRCADLLVQ 241 Query 234 IAAARAVVADACH-----APTPTNAATARLAASEALSTAAAEGIQLHGGIAITWEHDMHL 288 + AR + A AP A+ S+A S AAE IQLHGG+AITWEH+ HL Sbjct 242 VETARTMSWAAAWELTQPAPDRRLVHAAKSWCSDAFSQVAAEMIQLHGGVAITWEHEAHL 301 Query 289 YFKRAHGSAQLL 300 YFKRAH +AQL Sbjct 302 YFKRAHATAQLF 313 >gi|343925878|ref|ZP_08765393.1| putative acyl-CoA dehydrogenase [Gordonia alkanivorans NBRC 16433] gi|343764229|dbj|GAA12319.1| putative acyl-CoA dehydrogenase [Gordonia alkanivorans NBRC 16433] Length=365 Score = 192 bits (487), Expect = 7e-47, Method: Compositional matrix adjust. Identities = 137/335 (41%), Positives = 174/335 (52%), Gaps = 46/335 (13%) Query 14 VASLVAKHAGPAAVRAAMASDRGYDESLWRLLCEQVGAAALVIPEELGGAGGELADAAIV 73 V L+ + A+VR AMAS D LW LC ++G AAL IPE+ GGAG A+ A V Sbjct 20 VRDLLRRRGDTASVRTAMASTGRVDRGLWETLCTEIGVAALPIPEDAGGAGASWAELAAV 79 Query 74 VQELGRALVPSPLLGTT-LAELALLAAAKPD--AQALTELAQGSAIGALVLDPD------ 124 ++ELG L P P G++ LA A+L A D +Q L LA G AL + Sbjct 80 LEELGATLSPVPAFGSSVLATGAILLAQDDDTASQLLPALAAGEQTAALCWAGERGWDTP 139 Query 125 --------------YVVNGDIADIVVAATSGQLTRWTRFS---------AQPVATMDPTR 161 +VV+ + AD + SG T S P+ +DPTR Sbjct 140 GVHADAGLLSGTAHFVVDAESADTFLVLASGPGEHVTMHSVAADAAGVTVSPLPLLDPTR 199 Query 162 RLARLQSEETEPLCPDPGIADTAAIL-------LAAEQIGAAERCLQLTVEYAKSRVQFG 214 L+ ++ +E P AD AA L L+AEQ+G A+R L LTVEY KSR QFG Sbjct 200 ALSSVRFDEVVSTAI-PAPADLAARLRTLGWAMLSAEQVGGAQRALDLTVEYTKSRKQFG 258 Query 215 RPIGSFQALKHRMADLYVTIAAARAVVADACHAPTPTNAATARLA------ASEALSTAA 268 R IGSFQALKHRMAD+YV + AR++ A A + + LA S+A Sbjct 259 RTIGSFQALKHRMADMYVLVETARSISRAAVAAVAGDDPEASELALAAHVYCSDAFRRIT 318 Query 269 AEGIQLHGGIAITWEHDMHLYFKRAHGSAQLLESP 303 E IQLHGGI ITWEHD+ LYFKRA S+QLL +P Sbjct 319 GEAIQLHGGIGITWEHDIQLYFKRAQASSQLLGAP 353 >gi|271968078|ref|YP_003342274.1| acyl-CoA dehydrogenase domain-containing protein [Streptosporangium roseum DSM 43021] gi|270511253|gb|ACZ89531.1| acyl-CoA dehydrogenase domain-containing protein [Streptosporangium roseum DSM 43021] Length=326 Score = 191 bits (484), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 123/311 (40%), Positives = 174/311 (56%), Gaps = 14/311 (4%) Query 5 EERQMLRETVASLVAKHAGPAAVRAAMASDRGYDESLWRLLCEQVGAAALVIPEELGGAG 64 EE++ LR TV S +A + VR A S+ GYD +++R L ++G A L++P+E GGAG Sbjct 7 EEQRELRGTVRSFLAAASPLPEVRRAAESESGYDPAVYRRLNGELGLAGLIVPQEYGGAG 66 Query 65 GELADAAIVVQELGRALVPSPLLGTTLAELALLAAAKPDAQALTELAQGSAIGALVLDPD 124 A+ AIV++E G AL+P P L TTLA A+L D + L +A G+ + + LD D Sbjct 67 AGYAELAIVLEETGAALLPGPFLATTLA--AILLTELGDKELLPAIAAGTTVATVALDGD 124 Query 125 YVVNGDIADIVVAATSGQLTRWTRFSAQ-PVATMDPTRRLARLQSEETEPLCPDP----G 179 +NG AD+V+ G R R + P+ T+DPTRR AR+++ E + P Sbjct 125 RALNGAEADVVL-MVDGTRVRAVRGGGRTPLTTLDPTRRQARVEAAGGETVASSPEGMER 183 Query 180 IADTAAILLAAEQIGAAERCLQLTVEYAKSRVQFGRPIGSFQALKHRMADLYVTIAAARA 239 + D A+ +AAEQ+G L V Y+ RV FGRPIGS+Q +KH++AD++ + A + Sbjct 184 VRDLFAVAVAAEQLGVLRASLDAIVAYSGIRVAFGRPIGSYQGVKHKLADMHCKLEQAES 243 Query 240 VV------ADACHAPTPTNAATARLAASEALSTAAAEGIQLHGGIAITWEHDMHLYFKRA 293 +V AD P AA A+ A A + + LHGGI TWEHD HLY+KRA Sbjct 244 IVRNAAWAADEAPGELPLAAALAQAYVGRACFEVARDSLLLHGGIGFTWEHDAHLYYKRA 303 Query 294 HGSAQLLESPR 304 LL PR Sbjct 304 KSDEVLLGPPR 314 >gi|159038391|ref|YP_001537644.1| acyl-CoA dehydrogenase domain-containing protein [Salinispora arenicola CNS-205] gi|157917226|gb|ABV98653.1| acyl-CoA dehydrogenase domain protein [Salinispora arenicola CNS-205] Length=390 Score = 190 bits (483), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 148/363 (41%), Positives = 194/363 (54%), Gaps = 54/363 (14%) Query 1 MTPPEERQMLRETVASLVAKHAGPAAVRAAMASDRGYDESLWRLLCEQVGAAALVIPEEL 60 MTP E+Q LR +V +A+HA ++ + D LWR+LC Q+G A L +PE Sbjct 1 MTP--EQQALRMSVRGALARHASGRSIAELTEATADDDAELWRMLCGQIGVAGLAVPERF 58 Query 61 GGAGGELADAAIVVQELGRALVPSPLLGT-TLAELALLAAAKPDA--QALTELAQGSAI- 116 GG G L + +VV ELGR L PSP+LG LA ALL A + L +L G + Sbjct 59 GGLGAGLVETHVVVDELGRNLTPSPMLGCAVLASQALLHTEDESACRRILPDLVAGRRLA 118 Query 117 -----------------------GALVLDPDYVVNGDIADIV-VAATSGQLTRWTRFSAQ 152 G L + YV++ AD++ VAA + + TR A+ Sbjct 119 ALGWTDHHGDWDPHRPAYAATEDGRLTGEAHYVLDAHRADVLLVAAGTPEGTRLFEVDAR 178 Query 153 P-------VATMDPTRRLARLQSEE--------TEPLCPDPGIADTAAILLAAEQIGAAE 197 V TMD TRRL + +E T PL + D A++ L+AEQ+GAA Sbjct 179 HAGVHRRLVTTMDLTRRLGVVTLDEAPGRQLGGTNPL---ERVRDIASVALSAEQVGAAA 235 Query 198 RCLQLTVEYAKSRVQFGRPIGSFQALKHRMADLYVTIAAARAVVA------DACHAPTPT 251 R L+LTV +A +RVQFGRPIG FQA+ HR+ADL+V + +AR++ D+ A P Sbjct 236 RALELTVAHALTRVQFGRPIGGFQAVAHRLADLHVEVDSARSLSYAAASSLDSDAADAPL 295 Query 252 NAATARLAASEALSTAAAEGIQLHGGIAITWEHDMHLYFKRAHGSAQLLESPREVLRRLE 311 AA A + +EAL AAAE IQLHGGI ITWEHD H YFKRAHG+A L PR + RL Sbjct 296 LAAGAAVYCAEALERAAAEMIQLHGGIGITWEHDAHRYFKRAHGAAHLFGHPRGHVARLA 355 Query 312 SEV 314 V Sbjct 356 ETV 358 >gi|300788994|ref|YP_003769285.1| acyl-CoA dehydrogenase [Amycolatopsis mediterranei U32] gi|299798508|gb|ADJ48883.1| acyl-CoA dehydrogenase [Amycolatopsis mediterranei U32] gi|340530626|gb|AEK45831.1| acyl-CoA dehydrogenase [Amycolatopsis mediterranei S699] Length=348 Score = 183 bits (464), Expect = 4e-44, Method: Compositional matrix adjust. Identities = 129/339 (39%), Positives = 178/339 (53%), Gaps = 49/339 (14%) Query 5 EERQMLRETVASLVAKHAGPAAVRAAMASDRGYDESLWRLLCEQVGAAALVIPEELGGAG 64 EE++ LR V +A A VRA + S G+D ++WR L +Q+G + +PEE GG+G Sbjct 6 EEQEDLRAVVRRFLADRAD---VRARLDSGEGHDLAVWRQLADQLGLPGIAVPEEYGGSG 62 Query 65 GELADAAIVVQELGRALVPSPLLGTT-LAELALLAAAKPDAQA--LTELAQGSAIGALVL 121 G + IV++E+GR L+PSP T L AL A+ A++ L +A GS L + Sbjct 63 GGPVELGIVLEEMGRVLLPSPFFATVALVGQALTASGDDAAKSRWLPGIADGSLTATLAV 122 Query 122 DPD---------------------YVVNGDIADIV----------VAATSGQLTRWTRFS 150 + +VV+G AD++ V T+ +TR TR Sbjct 123 AEESGRATDLTTTATGGTLSGTKMFVVDGHTADLLLVVARTGLFAVEGTAPGVTR-TRLE 181 Query 151 AQPVATMDPTRRLARLQSEETE--PLCPDP--GIADTAAILLAAEQIGAAERCLQLTVEY 206 T+D TRRLAR+ + P+ P D A + LAAEQ+G A+ CL + V + Sbjct 182 -----TLDRTRRLARIDFDGAPAVPIGESPPRKALDLAVVALAAEQVGGAQACLDMAVGH 236 Query 207 AKSRVQFGRPIGSFQALKHRMADLYVTIAAARAVVADACHAPT--PTNAATARLAASEAL 264 AK RVQF RPIG+FQA+KH+ AD+ + I AAR+ V A A P A+ A S A Sbjct 237 AKVRVQFDRPIGTFQAIKHKCADMLLAIEAARSAVYHAASAGDELPVAASVAGAYCSVAF 296 Query 265 STAAAEGIQLHGGIAITWEHDMHLYFKRAHGSAQLLESP 303 + AA E IQ+HGG+ TWEHD H Y KRA S QL +P Sbjct 297 THAAKENIQIHGGVGYTWEHDAHRYLKRAKSSEQLFGAP 335 >gi|111222877|ref|YP_713671.1| putative acyl-CoA dehydrogenase [Frankia alni ACN14a] gi|111150409|emb|CAJ62107.1| putative acyl-CoA dehydrogenase [Frankia alni ACN14a] Length=392 Score = 183 bits (464), Expect = 4e-44, Method: Compositional matrix adjust. Identities = 139/356 (40%), Positives = 184/356 (52%), Gaps = 51/356 (14%) Query 6 ERQMLRETVASLVAKHAGPAAVRAAMASDRGYDESLWRLLCEQVGAAALVIPEELGGAGG 65 E + LR + A+ A AVR MA+ G+D W+ LC+++ AL +PEE GGAG Sbjct 8 EHEELRRGIRRYFAEVADADAVRRDMATPTGWDPVTWQRLCDELELPALAVPEEYGGAGF 67 Query 66 ELADAAIVVQELGRALVPSPLLGTTLAELALLAAAKPDAQA--LTELAQGSAIGALVL-D 122 L + I + E GR+L+ +PLL T++A ALL A PDA A L LA G+ G L + Sbjct 68 GLVELGIALSEAGRSLLCAPLLSTSIATQALLHAGDPDAAAAHLPGLAAGTTTGTLAARE 127 Query 123 P-------------------------DYVVNGDIADI-VVAATSGQLTRWTRFSA----- 151 P D+V++G A + VV AT+ T A Sbjct 128 PGRPWDATPTTTAERAGDGWALSGVKDWVLDGQSAGLFVVTATTAAGTSLFLVDAGAAGL 187 Query 152 --QPVATMDPTRRLARLQSEETEP--LCPD----PGIA---DTAAILLAAEQIGAAERCL 200 + + +DPTR++ R+ T L D PG+A D A LLAAEQ+G AE L Sbjct 188 AVEALPVVDPTRQVTRVTLTGTPGVLLGADGAGAPGLARTLDAAVTLLAAEQLGVAEAAL 247 Query 201 QLTVEYAKSRVQFGRPIGSFQALKHRMADLYVTIAAARAVV------ADACHAPTPTNAA 254 V+YAK R QFGRPIGSFQA+KH++A + + + AA + V AD A P A+ Sbjct 248 ASAVDYAKQREQFGRPIGSFQAIKHKLATVLLEVEAATSAVMYAAWTADESPAELPEVAS 307 Query 255 TARLAASEALSTAAAEGIQLHGGIAITWEHDMHLYFKRAHGSAQLLESPREVLRRL 310 A L SEA AA E +Q+HGGI TWEH HLY KRA LL P+E L R+ Sbjct 308 IAGLTCSEAALLAAGENVQVHGGIGFTWEHSAHLYLKRATTDRLLLRDPQEQLDRI 363 >gi|288916035|ref|ZP_06410417.1| acyl-CoA dehydrogenase domain protein [Frankia sp. EUN1f] gi|288352664|gb|EFC86859.1| acyl-CoA dehydrogenase domain protein [Frankia sp. EUN1f] Length=390 Score = 183 bits (464), Expect = 4e-44, Method: Compositional matrix adjust. Identities = 135/368 (37%), Positives = 184/368 (50%), Gaps = 62/368 (16%) Query 5 EERQMLRETVASLVAKHAGPAAVRAAMASDRGYDESLWRLLCEQVGAAALVIPEELGGAG 64 +E+ LR TV + K++ VR M + GYD +W L ++G A L +PEE GGAG Sbjct 7 DEQNELRRTVRDFLEKNSPETEVRRLMETAEGYDPDVWHQLAAELGIAGLAVPEEYGGAG 66 Query 65 GELADAAIVVQELGRALVPSPLLGTT-LAELALLAAAKPDAQA--LTELAQGSAIGALVL 121 + IV++E GRAL+ +PLL T LA LL A A L +A G+ + L L Sbjct 67 CGFVELGIVLEEAGRALLCAPLLSTVVLAASTLLELGDEGACADYLPGIADGTTLATLAL 126 Query 122 --------DPD----------------------------YVVNGDIADI--VVAATSGQL 143 DPD +V +G A + VVA T L Sbjct 127 TESTGRWNDPDAVTCTASPSGGTGGGADTGGWTVSGRKSFVPDGQTAALLLVVARTDAGL 186 Query 144 TRWT------RFSAQPVATMDPTRRLA---------RLQSEETEPLCPDPGIADTAAILL 188 + + + +P AT+D TRR A RL + + D AAI + Sbjct 187 SVFAVAGDVPQVRREPRATLDQTRRQADLTFTAAPARLLGTDGAAWPALERVLDLAAIAV 246 Query 189 AAEQIGAAERCLQLTVEYAKSRVQFGRPIGSFQALKHRMADLYVTIAAARAVVAD----A 244 AAEQ+GAA R L + V+YAK+RVQFGRPIG+FQA+KH++ADL++ + +AR+ A Sbjct 247 AAEQVGAASRVLDMAVDYAKTRVQFGRPIGAFQAIKHKLADLHLAVESARSAAYHGLWAA 306 Query 245 CHAP--TPTNAATARLAASEALSTAAAEGIQLHGGIAITWEHDMHLYFKRAHGSAQLLES 302 +P P A+ A+ +A TAA E IQ+HGGI TWEH HLY KRAH S QL + Sbjct 307 AESPLELPAAASLAKACCGDAFVTAATENIQVHGGIGFTWEHPAHLYLKRAHSSRQLFGN 366 Query 303 PREVLRRL 310 +RL Sbjct 367 AAHHRQRL 374 >gi|326384568|ref|ZP_08206247.1| acyl-CoA dehydrogenase domain-containing protein [Gordonia neofelifaecis NRRL B-59395] gi|326196702|gb|EGD53897.1| acyl-CoA dehydrogenase domain-containing protein [Gordonia neofelifaecis NRRL B-59395] Length=364 Score = 182 bits (462), Expect = 6e-44, Method: Compositional matrix adjust. Identities = 129/362 (36%), Positives = 186/362 (52%), Gaps = 52/362 (14%) Query 1 MTPPE-----ERQMLRETVASLVAKHAGPAAVRAAMASDRGYDESLWRLLCEQVGAAALV 55 MT PE +R L E++ ++ + + AAVR A+ ++ D LW LC ++G AAL Sbjct 1 MTTPEPISAEDRAALAESIRDVLRRRSDSAAVRTAITTEGRVDRKLWETLCAEIGVAALA 60 Query 56 IPEELGGAGGELADAAIVVQELGRALVPSPLLGTTLAELALLAAA---KPDAQALTELAQ 112 + EE GAG LA+ A+ V+E+G AL P P+ + + + A+ + A+ L LA Sbjct 61 VGEEHDGAGASLAETALAVEEVGAALAPVPVFSSAVLAAGAVLASGDGEAAARLLPGLAS 120 Query 113 GSAIGALVL--------------------DPDYVVNGDIADI--VVAATSGQLTRWTRF- 149 G IGAL +YV++G+ AD+ V+A+ G Sbjct 121 GETIGALCWASAAGWSKPGVTAEAGLLSGTAEYVIDGETADVFLVIASRPGSTDSSHTLH 180 Query 150 ---------SAQPVATMDPTRRLARLQSEE--TEPLCPDPGIADT----AAILLAAEQIG 194 + P+ +DPTR LAR+ +E + + IAD A +L+AEQ+G Sbjct 181 EVDAGAEGVTVTPLPVLDPTRPLARVTFDEVVSTTIASPSDIADRIRTLAWAMLSAEQVG 240 Query 195 AAERCLQLTVEYAKSRVQFGRPIGSFQALKHRMADLYVTIAAARAVVADACHA------P 248 A R L+LTVE+ +R QFGR + SFQALKH MAD+Y + A R++ A A A Sbjct 241 GAARALELTVEHTSARKQFGRTLASFQALKHTMADMYAQVEAMRSMSAAAIDAVVAGRDD 300 Query 249 TPTNAATARLAASEALSTAAAEGIQLHGGIAITWEHDMHLYFKRAHGSAQLLESPREVLR 308 AA A + SE+ + E IQLHGGI ITWEHD+ L+FKRA AQL P + L Sbjct 301 AAELAAAAHVYCSESYMSVTGEAIQLHGGIGITWEHDIGLFFKRAQADAQLFGQPHQALS 360 Query 309 RL 310 ++ Sbjct 361 QV 362 >gi|342857570|ref|ZP_08714226.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium colombiense CECT 3035] gi|342134903|gb|EGT88069.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium colombiense CECT 3035] Length=371 Score = 181 bits (458), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 126/359 (36%), Positives = 187/359 (53%), Gaps = 51/359 (14%) Query 3 PPEERQMLRETVASLVAKHAGPAAVRAAMASDRGYDESLWRLLCEQVGAAALVIPEELGG 62 P E LR V +A + VR MA+D GYDE WR + ++G + +PE GG Sbjct 2 PTNELDDLRGVVREYLAATSPSETVRRLMATDTGYDEVSWRQMAGELGLHGIAVPERWGG 61 Query 63 AGGELADAAIVVQELGRALVPSPLLGTT-LAELALLAAAKPDA--QALTELAQGSAIGAL 119 G + + A+V +E+GRAL SP T LA A+LA+ A Q + GS+ L Sbjct 62 GGAGVVELAVVFEEMGRALSCSPFFATVGLATQAILASDDDAAVEQLIPGFIDGSSTATL 121 Query 120 VL-------DPD--------------------YVVNGDIADIVVAA--TSGQLTRWTRFS 150 +L DPD V++G AD+V+AA T+ ++ + + Sbjct 122 ILNGRLGEWDPDAVTLRADRTRSGYRIHGEAPLVIDGHTADVVLAAARTTAGISLFAVRA 181 Query 151 AQP------VATMDPTRRLARLQSEETE-PLCPDPG--------IADTAAILLAAEQIGA 195 P +A +D TR++A +Q ++ + L G +D A L+AEQ+GA Sbjct 182 GAPGLRRTLLAGLDRTRKVASVQFDDAQAELIGRDGEAASFLARTSDLALTALSAEQVGA 241 Query 196 AERCLQLTVEYAKSRVQFGRPIGSFQALKHRMADLYVTIAAARAVVADACHAPT----PT 251 A+RCL + V+YAK+R+QFGRPIGSFQA+KHR AD+ V + AR+ + A A PT Sbjct 242 AQRCLDMAVDYAKNRIQFGRPIGSFQAVKHRCADMLVQVEGARSAASHAADAAATDDLPT 301 Query 252 NAATARLAASEALSTAAAEGIQLHGGIAITWEHDMHLYFKRAHGSAQLLESPREVLRRL 310 A+ A++ SEA A + +++HGGI TWEHD HL+ +RA + + +P +RL Sbjct 302 AASVAKMVCSEAFMQVALDNMRIHGGIGFTWEHDAHLFVRRAKATQLIFGAPDYHAQRL 360 >gi|312196370|ref|YP_004016431.1| acyl-CoA dehydrogenase domain-containing protein [Frankia sp. EuI1c] gi|311227706|gb|ADP80561.1| acyl-CoA dehydrogenase domain-containing protein [Frankia sp. EuI1c] Length=378 Score = 180 bits (456), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 131/360 (37%), Positives = 183/360 (51%), Gaps = 54/360 (15%) Query 5 EERQMLRETVASLVAKHAGPAAVRAAMASDRGYDESLWRLLCEQVGAAALVIPEELGGAG 64 +E+ LR TV + K + VR M + GYD + W L ++G A L +PEE GGAG Sbjct 10 QEQLELRRTVRDFLDKTSPETEVRRLMETPAGYDPAAWHQLAAEIGVAGLALPEEYGGAG 69 Query 65 GELADAAIVVQELGRALVPSPLLGTTLAELALLAAAKPD---AQALTELAQGSAIGALVL 121 A+ AIV++E GRAL+ +P+L T + + L A D A L +A G+ + AL L Sbjct 70 YGFAELAIVLEEAGRALLCAPVLSTVVLAASTLLALDDDLARADYLPGIADGTTVAALAL 129 Query 122 --------DPD------------YVVNGDIADIVVAATSGQLTRWTRFSA---------- 151 +PD + V+G ++ T+ L R A Sbjct 130 TEAGGPQDEPDALAVTAARHARGWTVSGTKPSVLDGQTASLLLVAARSGAGLSVFAVAGD 189 Query 152 ------QPVATMDPTRRLA---------RLQSEETEPLCPDPGIADTAAILLAAEQIGAA 196 +P AT+D TRR A RL EE + D AA+ +A EQ+G A Sbjct 190 APGVRREPRATLDQTRRQADLVFEAAPARLLGEEGAAWPALRHVLDLAAVAIALEQVGGA 249 Query 197 ERCLQLTVEYAKSRVQFGRPIGSFQALKHRMADLYVTIAAARAVVADACHAPT------P 250 R L + V+YA++RVQFG+PIGSFQA+KH++ADL++ + +AR+ A P Sbjct 250 GRVLDMAVDYARTRVQFGKPIGSFQAIKHKLADLHLAVESARSAAYYGGWAAAASPPELP 309 Query 251 TNAATARLAASEALSTAAAEGIQLHGGIAITWEHDMHLYFKRAHGSAQLLESPREVLRRL 310 A+ A+ +A +A TAA E IQ+HGGI TWEH HLY KRAH S QL +P +RL Sbjct 310 LAASLAKASAGDAYVTAATENIQIHGGIGFTWEHPAHLYLKRAHSSRQLFGNPAYHRQRL 369 >gi|183982865|ref|YP_001851156.1| acyl-CoA dehydrogenase FadE18 [Mycobacterium marinum M] gi|183176191|gb|ACC41301.1| acyl-CoA dehydrogenase FadE18 [Mycobacterium marinum M] Length=362 Score = 177 bits (449), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 135/342 (40%), Positives = 174/342 (51%), Gaps = 46/342 (13%) Query 6 ERQMLRETVASLVAKHAGPAAVRAAMASDRGYDESLWRLLCEQVGAAALVIPEELGGAGG 65 E+ RE++ + A PA VR +A+ G+D+ LW LC ++ AL P E GGAGG Sbjct 8 EQDDFRESLRGFLRDQAPPARVRQ-VAAVGGHDKKLWHRLCAELELPALHAPPEYGGAGG 66 Query 66 ELADAAIVVQELGRALVPSPLLGTTLAELALLAAAKPDAQA--LTELAQGSAIGALVL-D 122 L + AI ELGRAL P P T LA A+L + + L+ L G IGAL Sbjct 67 TLVETAIAFGELGRALTPVPFAATILAIEAILRMGDSEQRKGLLSGLLSGDRIGALAAAG 126 Query 123 PDY----------------------VVNGDIADIVV--AATSGQLTRWTRFSAQP----- 153 PD V++G +AD+ V A + G + + +A P Sbjct 127 PDLSVTSVRAGRRDGRPVLTGECAPVLHGHVADLFVVPAESDGAVILYVVDAAAPGVAVV 186 Query 154 -VATMDPTR-----RLARLQSEETEPLCPDP--GIADTAAILLAAEQIGAAERCLQLTVE 205 + + D TR RL R +E D + D A +LLAAE +G AE CL L +E Sbjct 187 GLPSFDITRPVAKLRLVRAPAEALAASSADEVARLLDVARVLLAAEMLGGAEACLDLAIE 246 Query 206 YAKSRVQFGRPIGSFQALKHRMADLYVTIAAARAVV--ADACHAPTPTNAATARLAASEA 263 YA SR QF RPIGSFQA+KHR AD+ + I A RA V A C A ATA LA ++A Sbjct 247 YACSRKQFDRPIGSFQAVKHRCADMMIEIDATRAAVMFAQLCAAGGDELHATAPLAKAQA 306 Query 264 LST---AAAEGIQLHGGIAITWEHDMHLYFKRAHGSAQLLES 302 T A IQ+HGGIA TWEHD+HLYF+RA + L S Sbjct 307 ADTYVLCAGSAIQVHGGIAFTWEHDLHLYFRRAKTTEALFGS 348 >gi|118618310|ref|YP_906642.1| acyl-CoA dehydrogenase FadE18 [Mycobacterium ulcerans Agy99] gi|118570420|gb|ABL05171.1| acyl-CoA dehydrogenase FadE18 [Mycobacterium ulcerans Agy99] Length=362 Score = 177 bits (449), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 135/342 (40%), Positives = 174/342 (51%), Gaps = 46/342 (13%) Query 6 ERQMLRETVASLVAKHAGPAAVRAAMASDRGYDESLWRLLCEQVGAAALVIPEELGGAGG 65 E+ RE++ + A PA VR +A+ G+D+ LW LC ++ AL P E GGAGG Sbjct 8 EQDDFRESLRGFLRDQAPPARVRQ-VAAVGGHDKKLWHRLCAELELPALHAPPEYGGAGG 66 Query 66 ELADAAIVVQELGRALVPSPLLGTTLAELALLAAAKPDAQA--LTELAQGSAIGALVL-D 122 L + AI ELGRAL P P T LA A+L + + L+ L G IGAL Sbjct 67 TLVETAIAFGELGRALTPVPFAATILAIEAILRMGDSEQRKGLLSGLLSGDRIGALAAAG 126 Query 123 PDY----------------------VVNGDIADIVV--AATSGQLTRWTRFSAQP----- 153 PD V++G +AD+ V A + G + + +A P Sbjct 127 PDLSVTSVRAGRRDGRPVLTGECAPVLHGHVADLFVVPAESDGAVILYVVDAAAPGVAVV 186 Query 154 -VATMDPTR-----RLARLQSEETEPLCPDP--GIADTAAILLAAEQIGAAERCLQLTVE 205 + + D TR RL R +E D + D A +LLAAE +G AE CL L +E Sbjct 187 GLPSFDITRPVAKLRLVRAPAEALAASSADEVARLLDVARVLLAAEMLGGAEACLDLAIE 246 Query 206 YAKSRVQFGRPIGSFQALKHRMADLYVTIAAARAVV--ADACHAPTPTNAATARLAASEA 263 YA SR QF RPIGSFQA+KHR AD+ + I A RA V A C A ATA LA ++A Sbjct 247 YACSRKQFDRPIGSFQAVKHRCADMMIEIDATRAAVMFAQLCAAGGDELHATAPLAKAQA 306 Query 264 LST---AAAEGIQLHGGIAITWEHDMHLYFKRAHGSAQLLES 302 T A IQ+HGGIA TWEHD+HLYF+RA + L S Sbjct 307 AGTYVLCAGSAIQVHGGIAFTWEHDLHLYFRRAKTTEALFGS 348 >gi|148556534|ref|YP_001264116.1| acyl-CoA dehydrogenase domain-containing protein [Sphingomonas wittichii RW1] gi|148501724|gb|ABQ69978.1| acyl-CoA dehydrogenase domain protein [Sphingomonas wittichii RW1] Length=354 Score = 175 bits (444), Expect = 7e-42, Method: Compositional matrix adjust. Identities = 130/330 (40%), Positives = 174/330 (53%), Gaps = 27/330 (8%) Query 1 MTPPEERQMLRETVASLVAKHAGPAAVRAAMASDRGYDESLWRLLCEQVGAAALVIPEEL 60 + +E+ M+ ETV S A+ A RAAM + G+D LWR +++G L +PEE Sbjct 3 FSFSDEQAMIAETVRSFFAEQATSERTRAAMETAHGHDAELWRSAAQELGLVGLALPEEY 62 Query 61 GGAGGELADAAIVVQELGRALVPSPLLGTTLAELALLAAAKPDAQA--LTELAQGSAIGA 118 GG+G ++AIV + G + PLL T LA AL+A D +A L +LA G IG+ Sbjct 63 GGSGLGQIESAIVAEAAGHQVAALPLLSTALAVRALVAGGTADQRAHWLPKLASGEVIGS 122 Query 119 -----------LVLDPDYVVNGDIADIVVAATSGQLTRWTRFSA--QPVATMDPTRRLAR 165 L D+V +G +A++ V A G + +R +A P +MD TR AR Sbjct 123 YGEGGRIDGGRLHGRIDHVPHGAVAELFVIAADGGVALLSRDAAVVTPCTSMDQTRPYAR 182 Query 166 LQSE--ETEPLCPDPGIADTAA----ILLAAEQIGAAERCLQLTVEYAKSRVQFGRPIGS 219 + ++ E L P D A I LAA+ +G A+ CL TV YAK RVQFGR IGS Sbjct 183 IDADGAAVELLADGPAAIDAAMRAGWIALAADALGGAQACLDRTVAYAKERVQFGRAIGS 242 Query 220 FQALKHRMADLYVTIAAARAVV------ADACHAPTPTNAATARLAASEALSTAAAEGIQ 273 FQA+KHR+AD+ V I R+ V AD A A+ A++ A IQ Sbjct 243 FQAIKHRLADMMVEIEQTRSAVYWAACAADEGAPDALLAAHAAKALAADTYRFCAGNMIQ 302 Query 274 LHGGIAITWEHDMHLYFKRAHGSAQLLESP 303 LHGGI TWEHD HL+FKRA A LL +P Sbjct 303 LHGGIGFTWEHDAHLFFKRAQSDATLLGTP 332 >gi|300785722|ref|YP_003766013.1| acyl-CoA dehydrogenase [Amycolatopsis mediterranei U32] gi|299795236|gb|ADJ45611.1| acyl-CoA dehydrogenase [Amycolatopsis mediterranei U32] gi|340527185|gb|AEK42390.1| acyl-CoA dehydrogenase [Amycolatopsis mediterranei S699] Length=371 Score = 175 bits (444), Expect = 8e-42, Method: Compositional matrix adjust. Identities = 121/349 (35%), Positives = 171/349 (49%), Gaps = 53/349 (15%) Query 5 EERQMLRETVASLVAKHAGPAAVRAAMASDRGYDESLWRLLCEQVGAAALVIPEELGGAG 64 +E++ LR V + + VR MA DRG+D +W +C ++G A L +PEE GGAG Sbjct 7 KEQEDLRSVVREFLTDFSPEPLVRRLMADDRGHDRPMWTKMCGELGLAGLAVPEEYGGAG 66 Query 65 GELADAAIVVQELGRALVPSPLLGTTLAELALLAAAKPD---AQALTELAQGSAIGALVL 121 + IV++ELGRAL +P L + + LL A + + L LA+G IG + L Sbjct 67 YTFVELGIVLEELGRALTVTPFLASVVMATTLLLATDDEGAKSDYLPALAEGRRIGTVAL 126 Query 122 DPD-------------------YVVNGDIADI----------VVAATSGQLTRWTRFSA- 151 D +V++G + + V+A + + F+ Sbjct 127 AEDSGHWTREGVAMQARPAGAGWVLDGHKSFVLDLMSADLVLVIARVDAEAGAFGVFAVE 186 Query 152 --------QPVATMDPTRRLARLQSEETEPLCPDPGIA------DTAAILLAAEQIGAAE 197 QP+ +D TR+ RL +T G A D AI ++AE +G A+ Sbjct 187 PGAAGLERQPLPVLDQTRKQGRLTCADTPARLIAGGWAAVDRMLDLTAIAVSAEMLGGAQ 246 Query 198 RCLQLTVEYAKSRVQFGRPIGSFQALKHRMADLYVTIAAARAVV-----ADACHAPT-PT 251 R L++ V YA R QFGRPIGSFQA+KH+ A + + + AARA V A + AP P Sbjct 247 RTLEMAVSYAGVREQFGRPIGSFQAIKHKCATMLMEVEAARAAVYYALWAASTQAPDLPA 306 Query 252 NAATARLAASEALSTAAAEGIQLHGGIAITWEHDMHLYFKRAHGSAQLL 300 A+ + S+A A E IQ+HGGI TWEH HLYFKRA SA L Sbjct 307 VASLTKAFCSDAYQFTAGENIQIHGGIGYTWEHPAHLYFKRAKNSALFL 355 Lambda K H 0.317 0.130 0.372 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 555428799294 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40