BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv3570c Length=394 Score E Sequences producing significant alignments: (Bits) Value gi|15610706|ref|NP_218087.1| oxidoreductase [Mycobacterium tuber... 808 0.0 gi|31794747|ref|NP_857240.1| oxidoreductase [Mycobacterium bovis... 806 0.0 gi|240169794|ref|ZP_04748453.1| putative oxidoreductase [Mycobac... 775 0.0 gi|183985033|ref|YP_001853324.1| acyl-CoA dehydrogenase [Mycobac... 752 0.0 gi|118619320|ref|YP_907652.1| acyl-CoA dehydrogenase [Mycobacter... 750 0.0 gi|41406595|ref|NP_959431.1| hypothetical protein MAP0497 [Mycob... 745 0.0 gi|118466617|ref|YP_879871.1| pigment production hydroxylase [My... 745 0.0 gi|254822730|ref|ZP_05227731.1| pigment production hydroxylase [... 744 0.0 gi|296166619|ref|ZP_06849047.1| pigment production hydroxylase [... 740 0.0 gi|342862402|ref|ZP_08719042.1| hypothetical protein MCOL_26043 ... 739 0.0 gi|333992494|ref|YP_004525108.1| acyl-CoA dehydrogenase [Mycobac... 722 0.0 gi|108801672|ref|YP_641869.1| acyl-CoA dehydrogenase, type 2-lik... 697 0.0 gi|118469163|ref|YP_890262.1| pigment production hydroxylase [My... 689 0.0 gi|145222055|ref|YP_001132733.1| acyl-CoA dehydrogenase type 2 [... 683 0.0 gi|120406256|ref|YP_956085.1| acyl-CoA dehydrogenase type 2 [Myc... 683 0.0 gi|169627687|ref|YP_001701336.1| hypothetical protein MAB_0584 [... 656 0.0 gi|226363864|ref|YP_002781646.1| hydroxylase [Rhodococcus opacus... 637 1e-180 gi|289572222|ref|ZP_06452449.1| oxidoreductase [Mycobacterium tu... 635 3e-180 gi|312138146|ref|YP_004005482.1| acyl-CoA dehydrogenase [Rhodoco... 635 5e-180 gi|111021511|ref|YP_704483.1| 3-HSA hydroxylase, oxygenase [Rhod... 634 8e-180 gi|229494610|ref|ZP_04388373.1| pigment production hydroxylase [... 630 9e-179 gi|226304244|ref|YP_002764202.1| hydroxylase [Rhodococcus erythr... 627 8e-178 gi|158430833|pdb|2RFQ|A Chain A, Crystal Structure Of 3-Hsa Hydr... 620 1e-175 gi|343925871|ref|ZP_08765386.1| putative hydroxylase [Gordonia a... 618 6e-175 gi|262200917|ref|YP_003272125.1| acyl-CoA dehydrogenase type 2 d... 615 4e-174 gi|54022438|ref|YP_116680.1| hypothetical protein nfa4740 [Nocar... 605 3e-171 gi|326384576|ref|ZP_08206255.1| acyl-CoA dehydrogenase type 2 do... 599 2e-169 gi|289572223|ref|ZP_06452450.1| oxidoreductase [Mycobacterium tu... 562 4e-158 gi|296141516|ref|YP_003648759.1| acyl-CoA dehydrogenase type 2 d... 519 4e-145 gi|302525664|ref|ZP_07278006.1| 3-HSA hydroxylase [Streptomyces ... 508 5e-142 gi|300784428|ref|YP_003764719.1| acyl-CoA dehydrogenase [Amycola... 503 3e-140 gi|333918595|ref|YP_004492176.1| 3-HSA hydroxylase [Amycolicicoc... 491 6e-137 gi|319948615|ref|ZP_08022739.1| acyl-CoA dehydrogenase [Dietzia ... 464 2e-128 gi|289752283|ref|ZP_06511661.1| oxidoreductase [Mycobacterium tu... 436 3e-120 gi|119717000|ref|YP_923965.1| acyl-CoA dehydrogenase type 2 [Noc... 434 2e-119 gi|311744290|ref|ZP_07718094.1| type 2 acyl-CoA dehydrogenase [A... 428 8e-118 gi|326331706|ref|ZP_08197994.1| putative hydroxylase [Nocardioid... 420 2e-115 gi|145595196|ref|YP_001159493.1| acyl-CoA dehydrogenase type 2 [... 412 6e-113 gi|229489207|ref|ZP_04383073.1| pigment production hydroxylase [... 409 4e-112 gi|226308599|ref|YP_002768559.1| hydroxylase [Rhodococcus erythr... 409 5e-112 gi|159038443|ref|YP_001537696.1| acyl-CoA dehydrogenase type 2 [... 409 5e-112 gi|126470055|dbj|BAF48138.1| hypothetical protein [Rhodococcus r... 388 1e-105 gi|325674664|ref|ZP_08154351.1| pigment production hydroxylase [... 385 9e-105 gi|312138345|ref|YP_004005681.1| acyl-CoA dehydrogenase [Rhodoco... 384 1e-104 gi|296269608|ref|YP_003652240.1| acyl-CoA dehydrogenase type 2 d... 384 1e-104 gi|269127712|ref|YP_003301082.1| Acyl-CoA dehydrogenase type 2 d... 382 7e-104 gi|325673063|ref|ZP_08152757.1| type 2 acyl-CoA dehydrogenase [R... 379 4e-103 gi|312141677|ref|YP_004009013.1| acyl-CoA dehydrogenase [Rhodoco... 379 5e-103 gi|111022775|ref|YP_705747.1| hydroxylase [Rhodococcus jostii RH... 379 7e-103 gi|54025328|ref|YP_119570.1| hypothetical protein nfa33590 [Noca... 378 8e-103 >gi|15610706|ref|NP_218087.1| oxidoreductase [Mycobacterium tuberculosis H37Rv] gi|15843183|ref|NP_338220.1| hydroxylase, putative [Mycobacterium tuberculosis CDC1551] gi|148663434|ref|YP_001284957.1| putative hydroxylase [Mycobacterium tuberculosis H37Ra] 64 more sequence titles Length=394 Score = 808 bits (2087), Expect = 0.0, Method: Compositional matrix adjust. Identities = 393/394 (99%), Positives = 394/394 (100%), Gaps = 0/394 (0%) Query 1 VTSIQQRDAQSVLAAIDNLLPEIRDRAQATEDLRRLPDETVKALDDVGFFTLLQPQQWGG 60 +TSIQQRDAQSVLAAIDNLLPEIRDRAQATEDLRRLPDETVKALDDVGFFTLLQPQQWGG Sbjct 1 MTSIQQRDAQSVLAAIDNLLPEIRDRAQATEDLRRLPDETVKALDDVGFFTLLQPQQWGG 60 Query 61 LQCDPALFFEATRRLASVCGSTGWVSSIVGVHNWHLALFDQRAQEEVWGEDPSTRISSSY 120 LQCDPALFFEATRRLASVCGSTGWVSSIVGVHNWHLALFDQRAQEEVWGEDPSTRISSSY Sbjct 61 LQCDPALFFEATRRLASVCGSTGWVSSIVGVHNWHLALFDQRAQEEVWGEDPSTRISSSY 120 Query 121 APMGAGVVVDGGYLVNGSWNWSSGCDHASWTFVGGPVIKDGRPVDFGSFLIPRSEYEIKD 180 APMGAGVVVDGGYLVNGSWNWSSGCDHASWTFVGGPVIKDGRPVDFGSFLIPRSEYEIKD Sbjct 121 APMGAGVVVDGGYLVNGSWNWSSGCDHASWTFVGGPVIKDGRPVDFGSFLIPRSEYEIKD 180 Query 181 VWYVVGLRGTGSNTLVVKDVFVPRHRFLSYKAMNDHTAGGLATNSAPVYKMPWGTMHPTT 240 VWYVVGLRGTGSNTLVVKDVFVPRHRFLSYKAMNDHTAGGLATNSAPVYKMPWGTMHPTT Sbjct 181 VWYVVGLRGTGSNTLVVKDVFVPRHRFLSYKAMNDHTAGGLATNSAPVYKMPWGTMHPTT 240 Query 241 ISAPIVGMAYGAYAAHVEHQGKRVRAAFAGEKAKDDPFAKVRIAEAASDIDAAWRQLIGN 300 ISAPIVGMAYGAYAAHVEHQGKRVRAAFAGEKAKDDPFAKVRIAEAASDIDAAWRQLIGN Sbjct 241 ISAPIVGMAYGAYAAHVEHQGKRVRAAFAGEKAKDDPFAKVRIAEAASDIDAAWRQLIGN 300 Query 301 VSDEYALLAAGKEIPFELRARARRDQVRATGRSIASIDRLFEASGATALSNEAPIQRFWR 360 VSDEYALLAAGKEIPFELRARARRDQVRATGRSIASIDRLFEASGATALSNEAPIQRFWR Sbjct 301 VSDEYALLAAGKEIPFELRARARRDQVRATGRSIASIDRLFEASGATALSNEAPIQRFWR 360 Query 361 DAHAGRVHAANDPERAYVIFGNHEFGLPPGDTMV 394 DAHAGRVHAANDPERAYVIFGNHEFGLPPGDTMV Sbjct 361 DAHAGRVHAANDPERAYVIFGNHEFGLPPGDTMV 394 >gi|31794747|ref|NP_857240.1| oxidoreductase [Mycobacterium bovis AF2122/97] gi|121639490|ref|YP_979714.1| putative oxidoreductase [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224991987|ref|YP_002646676.1| putative oxidoreductase [Mycobacterium bovis BCG str. Tokyo 172] 16 more sequence titles Length=394 Score = 806 bits (2082), Expect = 0.0, Method: Compositional matrix adjust. Identities = 392/394 (99%), Positives = 394/394 (100%), Gaps = 0/394 (0%) Query 1 VTSIQQRDAQSVLAAIDNLLPEIRDRAQATEDLRRLPDETVKALDDVGFFTLLQPQQWGG 60 +TSIQQRDAQSVLAAID+LLPEIRDRAQATEDLRRLPDETVKALDDVGFFTLLQPQQWGG Sbjct 1 MTSIQQRDAQSVLAAIDDLLPEIRDRAQATEDLRRLPDETVKALDDVGFFTLLQPQQWGG 60 Query 61 LQCDPALFFEATRRLASVCGSTGWVSSIVGVHNWHLALFDQRAQEEVWGEDPSTRISSSY 120 LQCDPALFFEATRRLASVCGSTGWVSSIVGVHNWHLALFDQRAQEEVWGEDPSTRISSSY Sbjct 61 LQCDPALFFEATRRLASVCGSTGWVSSIVGVHNWHLALFDQRAQEEVWGEDPSTRISSSY 120 Query 121 APMGAGVVVDGGYLVNGSWNWSSGCDHASWTFVGGPVIKDGRPVDFGSFLIPRSEYEIKD 180 APMGAGVVVDGGYLVNGSWNWSSGCDHASWTFVGGPVIKDGRPVDFGSFLIPRSEYEIKD Sbjct 121 APMGAGVVVDGGYLVNGSWNWSSGCDHASWTFVGGPVIKDGRPVDFGSFLIPRSEYEIKD 180 Query 181 VWYVVGLRGTGSNTLVVKDVFVPRHRFLSYKAMNDHTAGGLATNSAPVYKMPWGTMHPTT 240 VWYVVGLRGTGSNTLVVKDVFVPRHRFLSYKAMNDHTAGGLATNSAPVYKMPWGTMHPTT Sbjct 181 VWYVVGLRGTGSNTLVVKDVFVPRHRFLSYKAMNDHTAGGLATNSAPVYKMPWGTMHPTT 240 Query 241 ISAPIVGMAYGAYAAHVEHQGKRVRAAFAGEKAKDDPFAKVRIAEAASDIDAAWRQLIGN 300 ISAPIVGMAYGAYAAHVEHQGKRVRAAFAGEKAKDDPFAKVRIAEAASDIDAAWRQLIGN Sbjct 241 ISAPIVGMAYGAYAAHVEHQGKRVRAAFAGEKAKDDPFAKVRIAEAASDIDAAWRQLIGN 300 Query 301 VSDEYALLAAGKEIPFELRARARRDQVRATGRSIASIDRLFEASGATALSNEAPIQRFWR 360 VSDEYALLAAGKEIPFELRARARRDQVRATGRSIASIDRLFEASGATALSNEAPIQRFWR Sbjct 301 VSDEYALLAAGKEIPFELRARARRDQVRATGRSIASIDRLFEASGATALSNEAPIQRFWR 360 Query 361 DAHAGRVHAANDPERAYVIFGNHEFGLPPGDTMV 394 DAHAGRVHAANDPERAYVIFGNHEFGLPPGDTMV Sbjct 361 DAHAGRVHAANDPERAYVIFGNHEFGLPPGDTMV 394 >gi|240169794|ref|ZP_04748453.1| putative oxidoreductase [Mycobacterium kansasii ATCC 12478] Length=394 Score = 775 bits (2001), Expect = 0.0, Method: Compositional matrix adjust. Identities = 371/394 (95%), Positives = 385/394 (98%), Gaps = 0/394 (0%) Query 1 VTSIQQRDAQSVLAAIDNLLPEIRDRAQATEDLRRLPDETVKALDDVGFFTLLQPQQWGG 60 +TSIQQRDAQ+VLAAID+LLP+IR+RAQATEDLRRLPDETVKAL++ GFFTLLQPQQWGG Sbjct 1 MTSIQQRDAQAVLAAIDDLLPQIRERAQATEDLRRLPDETVKALEEAGFFTLLQPQQWGG 60 Query 61 LQCDPALFFEATRRLASVCGSTGWVSSIVGVHNWHLALFDQRAQEEVWGEDPSTRISSSY 120 LQCDP LFFEATRRLAS CGSTGWVSSI+GVHNWHLA FDQRAQEEVWGEDPS RISSSY Sbjct 61 LQCDPTLFFEATRRLASACGSTGWVSSIIGVHNWHLAQFDQRAQEEVWGEDPSVRISSSY 120 Query 121 APMGAGVVVDGGYLVNGSWNWSSGCDHASWTFVGGPVIKDGRPVDFGSFLIPRSEYEIKD 180 APMGAGVVVDGGYLVNGSWNWSSGCDHA+WTFVGGPVIKDGRPVDFGSFLIPR+EYEI D Sbjct 121 APMGAGVVVDGGYLVNGSWNWSSGCDHATWTFVGGPVIKDGRPVDFGSFLIPRTEYEIND 180 Query 181 VWYVVGLRGTGSNTLVVKDVFVPRHRFLSYKAMNDHTAGGLATNSAPVYKMPWGTMHPTT 240 VWYVVGL+GTGSNTLVVKDVFVPRHRFLSYKAMNDHTAGGL TN+A VYKMPWGTMHPTT Sbjct 181 VWYVVGLKGTGSNTLVVKDVFVPRHRFLSYKAMNDHTAGGLQTNTAAVYKMPWGTMHPTT 240 Query 241 ISAPIVGMAYGAYAAHVEHQGKRVRAAFAGEKAKDDPFAKVRIAEAASDIDAAWRQLIGN 300 ISAPIVGMAYGAYAAHVEHQGKRVRAAFAGEKAKDDPFAKVRIAEAASDIDAAWRQLIGN Sbjct 241 ISAPIVGMAYGAYAAHVEHQGKRVRAAFAGEKAKDDPFAKVRIAEAASDIDAAWRQLIGN 300 Query 301 VSDEYALLAAGKEIPFELRARARRDQVRATGRSIASIDRLFEASGATALSNEAPIQRFWR 360 V DE+ALL+AGKEIPFELRARARRDQVRATGRSIASIDRLFEASGATALSNEAPIQRFWR Sbjct 301 VGDEFALLSAGKEIPFELRARARRDQVRATGRSIASIDRLFEASGATALSNEAPIQRFWR 360 Query 361 DAHAGRVHAANDPERAYVIFGNHEFGLPPGDTMV 394 DAHAGRVHAANDPERAYVIFGNHEFGLPPGDTMV Sbjct 361 DAHAGRVHAANDPERAYVIFGNHEFGLPPGDTMV 394 >gi|183985033|ref|YP_001853324.1| acyl-CoA dehydrogenase [Mycobacterium marinum M] gi|183178359|gb|ACC43469.1| acyl-CoA dehydrogenase [Mycobacterium marinum M] Length=394 Score = 752 bits (1941), Expect = 0.0, Method: Compositional matrix adjust. Identities = 357/394 (91%), Positives = 380/394 (97%), Gaps = 0/394 (0%) Query 1 VTSIQQRDAQSVLAAIDNLLPEIRDRAQATEDLRRLPDETVKALDDVGFFTLLQPQQWGG 60 +T+IQQRDAQSVLAAID+LLP++R+RAQATEDLRRLPDETV+AL+DVGFFTLLQP+QWGG Sbjct 1 MTTIQQRDAQSVLAAIDDLLPQLRERAQATEDLRRLPDETVQALEDVGFFTLLQPEQWGG 60 Query 61 LQCDPALFFEATRRLASVCGSTGWVSSIVGVHNWHLALFDQRAQEEVWGEDPSTRISSSY 120 LQCDP LF+EATRRLAS CGSTGWVSSI+GVHNWHLALFDQ AQEEVWG DP TRISSSY Sbjct 61 LQCDPTLFYEATRRLASACGSTGWVSSIIGVHNWHLALFDQLAQEEVWGSDPKTRISSSY 120 Query 121 APMGAGVVVDGGYLVNGSWNWSSGCDHASWTFVGGPVIKDGRPVDFGSFLIPRSEYEIKD 180 APMGAGVVVDGGYLVNGSWNWSSGCDHA+W F GGPVIKDGRPVDFGSFLIPR+EY I D Sbjct 121 APMGAGVVVDGGYLVNGSWNWSSGCDHATWCFAGGPVIKDGRPVDFGSFLIPRTEYRIDD 180 Query 181 VWYVVGLRGTGSNTLVVKDVFVPRHRFLSYKAMNDHTAGGLATNSAPVYKMPWGTMHPTT 240 VW+VVGLRGTGSNT+VVKDVFVPRHRFLSYKAMNDHTAGGL TN+APVYKMPWGTMHPTT Sbjct 181 VWHVVGLRGTGSNTVVVKDVFVPRHRFLSYKAMNDHTAGGLQTNTAPVYKMPWGTMHPTT 240 Query 241 ISAPIVGMAYGAYAAHVEHQGKRVRAAFAGEKAKDDPFAKVRIAEAASDIDAAWRQLIGN 300 I+APIVGMAYGAY AHVEHQGKRVRAAFAGEKAKDDPFAKVRIAEAASDIDAAWRQL+GN Sbjct 241 ITAPIVGMAYGAYDAHVEHQGKRVRAAFAGEKAKDDPFAKVRIAEAASDIDAAWRQLMGN 300 Query 301 VSDEYALLAAGKEIPFELRARARRDQVRATGRSIASIDRLFEASGATALSNEAPIQRFWR 360 V DEYALL+AGKEIPF+LR RARRDQVRATGRSIASIDRLFEASGATAL+N+APIQRFWR Sbjct 301 VGDEYALLSAGKEIPFDLRTRARRDQVRATGRSIASIDRLFEASGATALANDAPIQRFWR 360 Query 361 DAHAGRVHAANDPERAYVIFGNHEFGLPPGDTMV 394 DAHAGRVHAANDPERAYVIFGN+EFGLP GDTMV Sbjct 361 DAHAGRVHAANDPERAYVIFGNNEFGLPAGDTMV 394 >gi|118619320|ref|YP_907652.1| acyl-CoA dehydrogenase [Mycobacterium ulcerans Agy99] gi|118571430|gb|ABL06181.1| acyl-CoA dehydrogenase [Mycobacterium ulcerans Agy99] Length=394 Score = 750 bits (1936), Expect = 0.0, Method: Compositional matrix adjust. Identities = 356/394 (91%), Positives = 379/394 (97%), Gaps = 0/394 (0%) Query 1 VTSIQQRDAQSVLAAIDNLLPEIRDRAQATEDLRRLPDETVKALDDVGFFTLLQPQQWGG 60 +T+IQQRDAQSVLAAID+LLP++R+RAQATEDLRRLPDETV+AL+DVGFFTLLQP+QWGG Sbjct 1 MTTIQQRDAQSVLAAIDDLLPQLRERAQATEDLRRLPDETVQALEDVGFFTLLQPEQWGG 60 Query 61 LQCDPALFFEATRRLASVCGSTGWVSSIVGVHNWHLALFDQRAQEEVWGEDPSTRISSSY 120 LQCDP LF+EATRRLAS CGSTGWVSSI+GVHNWHLALFDQ AQEEVWG DP TRISSSY Sbjct 61 LQCDPTLFYEATRRLASACGSTGWVSSIIGVHNWHLALFDQLAQEEVWGSDPKTRISSSY 120 Query 121 APMGAGVVVDGGYLVNGSWNWSSGCDHASWTFVGGPVIKDGRPVDFGSFLIPRSEYEIKD 180 APMGAGVVVDGGYLVNGSWNWSSGCDH +W F GGPVIKDGRPVDFGSFLIPR+EY I D Sbjct 121 APMGAGVVVDGGYLVNGSWNWSSGCDHGTWCFAGGPVIKDGRPVDFGSFLIPRTEYRIDD 180 Query 181 VWYVVGLRGTGSNTLVVKDVFVPRHRFLSYKAMNDHTAGGLATNSAPVYKMPWGTMHPTT 240 VW+VVGLRGTGSNT+VVKDVFVPRHRFLSYKAMNDHTAGGL TN+APVYKMPWGTMHPTT Sbjct 181 VWHVVGLRGTGSNTVVVKDVFVPRHRFLSYKAMNDHTAGGLQTNTAPVYKMPWGTMHPTT 240 Query 241 ISAPIVGMAYGAYAAHVEHQGKRVRAAFAGEKAKDDPFAKVRIAEAASDIDAAWRQLIGN 300 I+APIVGMAYGAY AHVEHQGKRVRAAFAGEKAKDDPFAKVRIAEAASDIDAAWRQL+GN Sbjct 241 ITAPIVGMAYGAYDAHVEHQGKRVRAAFAGEKAKDDPFAKVRIAEAASDIDAAWRQLMGN 300 Query 301 VSDEYALLAAGKEIPFELRARARRDQVRATGRSIASIDRLFEASGATALSNEAPIQRFWR 360 V DEYALL+AGKEIPF+LR RARRDQVRATGRSIASIDRLFEASGATAL+N+APIQRFWR Sbjct 301 VGDEYALLSAGKEIPFDLRTRARRDQVRATGRSIASIDRLFEASGATALANDAPIQRFWR 360 Query 361 DAHAGRVHAANDPERAYVIFGNHEFGLPPGDTMV 394 DAHAGRVHAANDPERAYVIFGN+EFGLP GDTMV Sbjct 361 DAHAGRVHAANDPERAYVIFGNNEFGLPAGDTMV 394 >gi|41406595|ref|NP_959431.1| hypothetical protein MAP0497 [Mycobacterium avium subsp. paratuberculosis K-10] gi|254773548|ref|ZP_05215064.1| hypothetical protein MaviaA2_02575 [Mycobacterium avium subsp. avium ATCC 25291] gi|41394944|gb|AAS02814.1| hypothetical protein MAP_0497 [Mycobacterium avium subsp. paratuberculosis K-10] gi|336458491|gb|EGO37464.1| acyl-CoA dehydrogenase [Mycobacterium avium subsp. paratuberculosis S397] Length=394 Score = 745 bits (1923), Expect = 0.0, Method: Compositional matrix adjust. Identities = 356/394 (91%), Positives = 375/394 (96%), Gaps = 0/394 (0%) Query 1 VTSIQQRDAQSVLAAIDNLLPEIRDRAQATEDLRRLPDETVKALDDVGFFTLLQPQQWGG 60 +TSIQQRDAQSVLA ID+LLP IR+RAQATEDLRRLPDETV L DVGFFTLLQP+QWGG Sbjct 1 MTSIQQRDAQSVLAGIDDLLPRIRERAQATEDLRRLPDETVADLQDVGFFTLLQPEQWGG 60 Query 61 LQCDPALFFEATRRLASVCGSTGWVSSIVGVHNWHLALFDQRAQEEVWGEDPSTRISSSY 120 LQCDP LF+EA RRLAS CGSTGWVSSI+GVHNWHLALFDQ+AQEEVWGEDP+ RISSSY Sbjct 61 LQCDPTLFYEAVRRLASACGSTGWVSSIIGVHNWHLALFDQQAQEEVWGEDPNVRISSSY 120 Query 121 APMGAGVVVDGGYLVNGSWNWSSGCDHASWTFVGGPVIKDGRPVDFGSFLIPRSEYEIKD 180 APMGAGVV DGGYLVNGSWNWSSGCDHA+W F+GGPVIKDGRPVDFGSFLIPRSEY I D Sbjct 121 APMGAGVVTDGGYLVNGSWNWSSGCDHATWAFLGGPVIKDGRPVDFGSFLIPRSEYRIDD 180 Query 181 VWYVVGLRGTGSNTLVVKDVFVPRHRFLSYKAMNDHTAGGLATNSAPVYKMPWGTMHPTT 240 VW+VVGLRGTGSNT+VVKDVFVPRHRFLSYKAMND TAGG TN+APVYKMPWGTMHPTT Sbjct 181 VWHVVGLRGTGSNTVVVKDVFVPRHRFLSYKAMNDGTAGGYQTNTAPVYKMPWGTMHPTT 240 Query 241 ISAPIVGMAYGAYAAHVEHQGKRVRAAFAGEKAKDDPFAKVRIAEAASDIDAAWRQLIGN 300 ISAPIVGMAYGAYAAHVEHQGKRVRAAFAGEKAKDDPFAKVRIAEAASDIDAAWRQL GN Sbjct 241 ISAPIVGMAYGAYAAHVEHQGKRVRAAFAGEKAKDDPFAKVRIAEAASDIDAAWRQLSGN 300 Query 301 VSDEYALLAAGKEIPFELRARARRDQVRATGRSIASIDRLFEASGATALSNEAPIQRFWR 360 V+DEYALL+AGKEIPFELRARARRDQVRATGR+IASIDRLFEASGATAL+N+ P+QRFWR Sbjct 301 VADEYALLSAGKEIPFELRARARRDQVRATGRAIASIDRLFEASGATALANDQPVQRFWR 360 Query 361 DAHAGRVHAANDPERAYVIFGNHEFGLPPGDTMV 394 DAHAGRVHAANDPERAY IFGNHEFGLPPGDTMV Sbjct 361 DAHAGRVHAANDPERAYQIFGNHEFGLPPGDTMV 394 >gi|118466617|ref|YP_879871.1| pigment production hydroxylase [Mycobacterium avium 104] gi|118167904|gb|ABK68801.1| pigment production hydroxylase [Mycobacterium avium 104] Length=394 Score = 745 bits (1923), Expect = 0.0, Method: Compositional matrix adjust. Identities = 356/394 (91%), Positives = 375/394 (96%), Gaps = 0/394 (0%) Query 1 VTSIQQRDAQSVLAAIDNLLPEIRDRAQATEDLRRLPDETVKALDDVGFFTLLQPQQWGG 60 +TSIQQRDAQSVLA ID+LLP IR+RAQATEDLRRLPDETV L DVGFFTLLQP+QWGG Sbjct 1 MTSIQQRDAQSVLAGIDDLLPRIRERAQATEDLRRLPDETVADLQDVGFFTLLQPEQWGG 60 Query 61 LQCDPALFFEATRRLASVCGSTGWVSSIVGVHNWHLALFDQRAQEEVWGEDPSTRISSSY 120 LQCDP LF+EA RRLAS CGSTGWVSSI+GVHNWHLALFDQ+AQEEVWGEDP+ RISSSY Sbjct 61 LQCDPTLFYEAVRRLASACGSTGWVSSIIGVHNWHLALFDQQAQEEVWGEDPNVRISSSY 120 Query 121 APMGAGVVVDGGYLVNGSWNWSSGCDHASWTFVGGPVIKDGRPVDFGSFLIPRSEYEIKD 180 APMGAGVV DGGYLVNGSWNWSSGCDHA+W F+GGPVIKDGRPVDFGSFLIPRSEY I D Sbjct 121 APMGAGVVTDGGYLVNGSWNWSSGCDHATWAFLGGPVIKDGRPVDFGSFLIPRSEYRIDD 180 Query 181 VWYVVGLRGTGSNTLVVKDVFVPRHRFLSYKAMNDHTAGGLATNSAPVYKMPWGTMHPTT 240 VW+VVGLRGTGSNT+VVKDVFVPRHRFLSYKAMND TAGG TN+APVYKMPWGTMHPTT Sbjct 181 VWHVVGLRGTGSNTVVVKDVFVPRHRFLSYKAMNDGTAGGYETNTAPVYKMPWGTMHPTT 240 Query 241 ISAPIVGMAYGAYAAHVEHQGKRVRAAFAGEKAKDDPFAKVRIAEAASDIDAAWRQLIGN 300 ISAPIVGMAYGAYAAHVEHQGKRVRAAFAGEKAKDDPFAKVRIAEAASDIDAAWRQL GN Sbjct 241 ISAPIVGMAYGAYAAHVEHQGKRVRAAFAGEKAKDDPFAKVRIAEAASDIDAAWRQLSGN 300 Query 301 VSDEYALLAAGKEIPFELRARARRDQVRATGRSIASIDRLFEASGATALSNEAPIQRFWR 360 V+DEYALL+AGKEIPFELRARARRDQVRATGR+IASIDRLFEASGATAL+N+ P+QRFWR Sbjct 301 VADEYALLSAGKEIPFELRARARRDQVRATGRAIASIDRLFEASGATALANDQPVQRFWR 360 Query 361 DAHAGRVHAANDPERAYVIFGNHEFGLPPGDTMV 394 DAHAGRVHAANDPERAY IFGNHEFGLPPGDTMV Sbjct 361 DAHAGRVHAANDPERAYQIFGNHEFGLPPGDTMV 394 >gi|254822730|ref|ZP_05227731.1| pigment production hydroxylase [Mycobacterium intracellulare ATCC 13950] Length=394 Score = 744 bits (1922), Expect = 0.0, Method: Compositional matrix adjust. Identities = 354/394 (90%), Positives = 377/394 (96%), Gaps = 0/394 (0%) Query 1 VTSIQQRDAQSVLAAIDNLLPEIRDRAQATEDLRRLPDETVKALDDVGFFTLLQPQQWGG 60 +TSIQQRDAQSVLA ID+LLP+IR+RAQATEDLRRLPDETV+ L DVGFFTLLQP+QWGG Sbjct 1 MTSIQQRDAQSVLAGIDDLLPQIRERAQATEDLRRLPDETVQDLQDVGFFTLLQPEQWGG 60 Query 61 LQCDPALFFEATRRLASVCGSTGWVSSIVGVHNWHLALFDQRAQEEVWGEDPSTRISSSY 120 LQCDP LF+EA RRLAS CGSTGWVSSI+GVHNWHLALFDQ+AQEEVWGEDP TR+SSSY Sbjct 61 LQCDPTLFYEAVRRLASACGSTGWVSSIIGVHNWHLALFDQQAQEEVWGEDPKTRVSSSY 120 Query 121 APMGAGVVVDGGYLVNGSWNWSSGCDHASWTFVGGPVIKDGRPVDFGSFLIPRSEYEIKD 180 APMGAGVV DGGYLVNG+WNWSSGCDHA+W F+GGPVIKDGRPVDFGSFLIPRSEY I D Sbjct 121 APMGAGVVTDGGYLVNGAWNWSSGCDHATWAFLGGPVIKDGRPVDFGSFLIPRSEYRIDD 180 Query 181 VWYVVGLRGTGSNTLVVKDVFVPRHRFLSYKAMNDHTAGGLATNSAPVYKMPWGTMHPTT 240 VW+VVGLRGTGSNT+VVKDVFVPRHRFLSYKAMND TAGG TN+APVYKMPWGTMHPTT Sbjct 181 VWHVVGLRGTGSNTVVVKDVFVPRHRFLSYKAMNDGTAGGYETNTAPVYKMPWGTMHPTT 240 Query 241 ISAPIVGMAYGAYAAHVEHQGKRVRAAFAGEKAKDDPFAKVRIAEAASDIDAAWRQLIGN 300 ISAPIVGMAYGAYAAHVEHQGKRVRAAFAGEKAKDDPFAKVRIAEAASDIDAAWRQL GN Sbjct 241 ISAPIVGMAYGAYAAHVEHQGKRVRAAFAGEKAKDDPFAKVRIAEAASDIDAAWRQLSGN 300 Query 301 VSDEYALLAAGKEIPFELRARARRDQVRATGRSIASIDRLFEASGATALSNEAPIQRFWR 360 V+DEYALL+AGKEIPFELRARARRDQVRATGR+IASIDRLFEASGATAL+N+ P+QRFWR Sbjct 301 VADEYALLSAGKEIPFELRARARRDQVRATGRAIASIDRLFEASGATALANDQPVQRFWR 360 Query 361 DAHAGRVHAANDPERAYVIFGNHEFGLPPGDTMV 394 DAHAGRVHAANDPERAY IFGN+EFGLPPGDTMV Sbjct 361 DAHAGRVHAANDPERAYQIFGNNEFGLPPGDTMV 394 >gi|296166619|ref|ZP_06849047.1| pigment production hydroxylase [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295898022|gb|EFG77600.1| pigment production hydroxylase [Mycobacterium parascrofulaceum ATCC BAA-614] Length=401 Score = 740 bits (1911), Expect = 0.0, Method: Compositional matrix adjust. Identities = 353/394 (90%), Positives = 373/394 (95%), Gaps = 0/394 (0%) Query 1 VTSIQQRDAQSVLAAIDNLLPEIRDRAQATEDLRRLPDETVKALDDVGFFTLLQPQQWGG 60 VTSIQQRDAQSVLA ID+LLP I +RAQATEDLRRLPDETV+ L DVGFFTLLQP+QWGG Sbjct 8 VTSIQQRDAQSVLAGIDDLLPRISERAQATEDLRRLPDETVQELQDVGFFTLLQPEQWGG 67 Query 61 LQCDPALFFEATRRLASVCGSTGWVSSIVGVHNWHLALFDQRAQEEVWGEDPSTRISSSY 120 LQCDP LF+EA RRLAS CGSTGWVSSI+GVHNWHLALFDQ+AQEEVWGEDP+ R+SSSY Sbjct 68 LQCDPGLFYEAVRRLASACGSTGWVSSIIGVHNWHLALFDQQAQEEVWGEDPNVRVSSSY 127 Query 121 APMGAGVVVDGGYLVNGSWNWSSGCDHASWTFVGGPVIKDGRPVDFGSFLIPRSEYEIKD 180 APMGAGVV DGGYLVNGSWNWSSGCDHA+W F+GGPVIKDGRPVDFGSFLIPRSEY I D Sbjct 128 APMGAGVVTDGGYLVNGSWNWSSGCDHATWAFLGGPVIKDGRPVDFGSFLIPRSEYRIDD 187 Query 181 VWYVVGLRGTGSNTLVVKDVFVPRHRFLSYKAMNDHTAGGLATNSAPVYKMPWGTMHPTT 240 VW+VVGLRGTGSNT+VVKDVFVPRHRFLSYKAMND TAGG TN+APVYKMPWGTMHPTT Sbjct 188 VWHVVGLRGTGSNTVVVKDVFVPRHRFLSYKAMNDGTAGGYQTNTAPVYKMPWGTMHPTT 247 Query 241 ISAPIVGMAYGAYAAHVEHQGKRVRAAFAGEKAKDDPFAKVRIAEAASDIDAAWRQLIGN 300 ISAPIVGMAYGAY AHVEHQGKRVRAAFAGEKAKDDPFAKVRIAEAASDIDAAWRQL GN Sbjct 248 ISAPIVGMAYGAYDAHVEHQGKRVRAAFAGEKAKDDPFAKVRIAEAASDIDAAWRQLSGN 307 Query 301 VSDEYALLAAGKEIPFELRARARRDQVRATGRSIASIDRLFEASGATALSNEAPIQRFWR 360 V+DEYALL+AGKEIPFELRARARRDQVRATGR+IASIDRLFEASGATAL N+ P+QRFWR Sbjct 308 VADEYALLSAGKEIPFELRARARRDQVRATGRAIASIDRLFEASGATALGNDQPVQRFWR 367 Query 361 DAHAGRVHAANDPERAYVIFGNHEFGLPPGDTMV 394 DAHAGRVHAANDPERAY IFGN+EFGLPPGDTMV Sbjct 368 DAHAGRVHAANDPERAYQIFGNNEFGLPPGDTMV 401 >gi|342862402|ref|ZP_08719042.1| hypothetical protein MCOL_26043 [Mycobacterium colombiense CECT 3035] gi|342130073|gb|EGT83407.1| hypothetical protein MCOL_26043 [Mycobacterium colombiense CECT 3035] Length=394 Score = 739 bits (1907), Expect = 0.0, Method: Compositional matrix adjust. Identities = 352/394 (90%), Positives = 374/394 (95%), Gaps = 0/394 (0%) Query 1 VTSIQQRDAQSVLAAIDNLLPEIRDRAQATEDLRRLPDETVKALDDVGFFTLLQPQQWGG 60 +TSIQQRDAQSVLA ID+LLP+IRDRAQATEDLRRLPDETV+ L DVGFFTLLQP+QWGG Sbjct 1 MTSIQQRDAQSVLAGIDDLLPQIRDRAQATEDLRRLPDETVQDLQDVGFFTLLQPEQWGG 60 Query 61 LQCDPALFFEATRRLASVCGSTGWVSSIVGVHNWHLALFDQRAQEEVWGEDPSTRISSSY 120 LQCDP LF+EA RRLAS CGSTGWVSSI+GVHNWHLALFDQ+AQEEVWGEDP+TR+SSSY Sbjct 61 LQCDPTLFYEAVRRLASACGSTGWVSSIIGVHNWHLALFDQQAQEEVWGEDPTTRVSSSY 120 Query 121 APMGAGVVVDGGYLVNGSWNWSSGCDHASWTFVGGPVIKDGRPVDFGSFLIPRSEYEIKD 180 APMGAGVV DGGYLVNGSWNWSSGCDHA+W F+GGPVIKDGRPVDFGSFLIPRSEY I D Sbjct 121 APMGAGVVTDGGYLVNGSWNWSSGCDHATWAFLGGPVIKDGRPVDFGSFLIPRSEYRIDD 180 Query 181 VWYVVGLRGTGSNTLVVKDVFVPRHRFLSYKAMNDHTAGGLATNSAPVYKMPWGTMHPTT 240 VW+VVGLRGTGSNT+VVKDVFVPRHRFLSYKAMND TAGG N+A VYKMPWGTMHPTT Sbjct 181 VWHVVGLRGTGSNTVVVKDVFVPRHRFLSYKAMNDGTAGGYQNNTAAVYKMPWGTMHPTT 240 Query 241 ISAPIVGMAYGAYAAHVEHQGKRVRAAFAGEKAKDDPFAKVRIAEAASDIDAAWRQLIGN 300 ISAPIVGMAYGAY AHVEHQGKRVRAAFAGEKAKDDPFAKVRIAEAASDIDAAWRQL GN Sbjct 241 ISAPIVGMAYGAYDAHVEHQGKRVRAAFAGEKAKDDPFAKVRIAEAASDIDAAWRQLSGN 300 Query 301 VSDEYALLAAGKEIPFELRARARRDQVRATGRSIASIDRLFEASGATALSNEAPIQRFWR 360 V+DEYALL+AGKEIPF+LRARARRDQVRATGR+IASIDRLFEASGATAL N+ P+QRFWR Sbjct 301 VADEYALLSAGKEIPFDLRARARRDQVRATGRAIASIDRLFEASGATALGNDQPVQRFWR 360 Query 361 DAHAGRVHAANDPERAYVIFGNHEFGLPPGDTMV 394 DAHAGRVHAANDPERAY IFGN+EFGLPPGDTMV Sbjct 361 DAHAGRVHAANDPERAYQIFGNNEFGLPPGDTMV 394 >gi|333992494|ref|YP_004525108.1| acyl-CoA dehydrogenase [Mycobacterium sp. JDM601] gi|333488462|gb|AEF37854.1| acyl-CoA dehydrogenase [Mycobacterium sp. JDM601] Length=396 Score = 722 bits (1863), Expect = 0.0, Method: Compositional matrix adjust. Identities = 338/396 (86%), Positives = 375/396 (95%), Gaps = 2/396 (0%) Query 1 VTSIQQRDAQSVLAAIDNLLPEIRDRAQATEDLRRLPDETVKALDDVGFFTLLQPQQWGG 60 +TSIQQRDAQSVLAAID+LLP++R+RAQ TEDLR+LPD +KAL+++GFFTLLQP QWGG Sbjct 1 MTSIQQRDAQSVLAAIDDLLPQLRERAQETEDLRKLPDANIKALEEIGFFTLLQPSQWGG 60 Query 61 LQCDPALFFEATRRLASVCGSTGWVSSIVGVHNWHLALFDQRAQEEVWGEDPSTRISSSY 120 L+CDPA+F+EA RR+AS CGSTGWV+SI+GVHNWHLALFDQRAQEEVWG D + R+SSSY Sbjct 61 LECDPAVFYEAVRRIASACGSTGWVASIIGVHNWHLALFDQRAQEEVWGTDTNVRVSSSY 120 Query 121 APMGAGVVVDG--GYLVNGSWNWSSGCDHASWTFVGGPVIKDGRPVDFGSFLIPRSEYEI 178 APMGAGVV + GY+VNG+WNWSSGCDHA+W F+GGPVIKDG+PVDFGSFLIPRSEY I Sbjct 121 APMGAGVVTENADGYIVNGAWNWSSGCDHATWAFLGGPVIKDGKPVDFGSFLIPRSEYTI 180 Query 179 KDVWYVVGLRGTGSNTLVVKDVFVPRHRFLSYKAMNDHTAGGLATNSAPVYKMPWGTMHP 238 DVW+VVGLRGTGSNT+VVKDVFVPRHRFLSYKAMND TAGG TN+APVYKMPWGTMHP Sbjct 181 DDVWHVVGLRGTGSNTVVVKDVFVPRHRFLSYKAMNDQTAGGYETNTAPVYKMPWGTMHP 240 Query 239 TTISAPIVGMAYGAYAAHVEHQGKRVRAAFAGEKAKDDPFAKVRIAEAASDIDAAWRQLI 298 TTISAPI+GMAYGAY AHV+HQGKRVRAAFAGEKAKDDPFAKVRIAEAASDIDA WRQLI Sbjct 241 TTISAPIMGMAYGAYQAHVDHQGKRVRAAFAGEKAKDDPFAKVRIAEAASDIDAGWRQLI 300 Query 299 GNVSDEYALLAAGKEIPFELRARARRDQVRATGRSIASIDRLFEASGATALSNEAPIQRF 358 GNV+DEYALLAAG+EIPF+LRARARRDQVRATGR+IASIDRLFEA+GATALSN+AP+QRF Sbjct 301 GNVADEYALLAAGEEIPFDLRARARRDQVRATGRAIASIDRLFEAAGATALSNDAPVQRF 360 Query 359 WRDAHAGRVHAANDPERAYVIFGNHEFGLPPGDTMV 394 WRDAHAGRVHAANDPERAY+IFGNHEFGLPPGDTMV Sbjct 361 WRDAHAGRVHAANDPERAYLIFGNHEFGLPPGDTMV 396 >gi|108801672|ref|YP_641869.1| acyl-CoA dehydrogenase, type 2-like protein [Mycobacterium sp. MCS] gi|119870823|ref|YP_940775.1| acyl-CoA dehydrogenase type 2 [Mycobacterium sp. KMS] gi|126437658|ref|YP_001073349.1| acyl-CoA dehydrogenase type 2 [Mycobacterium sp. JLS] gi|108772091|gb|ABG10813.1| Acyl-CoA dehydrogenase, type 2-like protein [Mycobacterium sp. MCS] gi|119696912|gb|ABL93985.1| Acyl-CoA dehydrogenase, type 2, C-terminal domain [Mycobacterium sp. KMS] gi|126237458|gb|ABO00859.1| Acyl-CoA dehydrogenase, type 2, C-terminal domain [Mycobacterium sp. JLS] Length=394 Score = 697 bits (1800), Expect = 0.0, Method: Compositional matrix adjust. Identities = 326/394 (83%), Positives = 361/394 (92%), Gaps = 0/394 (0%) Query 1 VTSIQQRDAQSVLAAIDNLLPEIRDRAQATEDLRRLPDETVKALDDVGFFTLLQPQQWGG 60 +TSI+QRDAQ+VL+ ID+LLP +R RAQ EDLRRLPDETVK LD++GFF LLQPQQWGG Sbjct 1 MTSIEQRDAQAVLSGIDDLLPTLRQRAQEAEDLRRLPDETVKDLDEIGFFKLLQPQQWGG 60 Query 61 LQCDPALFFEATRRLASVCGSTGWVSSIVGVHNWHLALFDQRAQEEVWGEDPSTRISSSY 120 +QCDP+LF+EA RRL S CGSTGWV+SI+GVHNWHLALFDQ+AQ+EVWG+DPS R+SSSY Sbjct 61 MQCDPSLFYEAVRRLGSACGSTGWVASIIGVHNWHLALFDQKAQDEVWGDDPSVRVSSSY 120 Query 121 APMGAGVVVDGGYLVNGSWNWSSGCDHASWTFVGGPVIKDGRPVDFGSFLIPRSEYEIKD 180 APMGAG VVDGGY V+G+W WSSGCDHA+W F+GGPVIKDG+PVDFGSFLIPRSEY I D Sbjct 121 APMGAGTVVDGGYRVSGAWQWSSGCDHATWAFLGGPVIKDGKPVDFGSFLIPRSEYRIDD 180 Query 181 VWYVVGLRGTGSNTLVVKDVFVPRHRFLSYKAMNDHTAGGLATNSAPVYKMPWGTMHPTT 240 VW VVGL+GTGSNT+VV+DVFVPRHRFLSYKAMND TAGG N+APVYKMPWGTMHPTT Sbjct 181 VWNVVGLKGTGSNTVVVEDVFVPRHRFLSYKAMNDGTAGGFENNTAPVYKMPWGTMHPTT 240 Query 241 ISAPIVGMAYGAYAAHVEHQGKRVRAAFAGEKAKDDPFAKVRIAEAASDIDAAWRQLIGN 300 ISAPI+GMAYGAY AHVEHQGKRVRAAFAGEK+KDDPFAK+RIAEAASDIDA WRQLIGN Sbjct 241 ISAPIMGMAYGAYEAHVEHQGKRVRAAFAGEKSKDDPFAKIRIAEAASDIDAGWRQLIGN 300 Query 301 VSDEYALLAAGKEIPFELRARARRDQVRATGRSIASIDRLFEASGATALSNEAPIQRFWR 360 V +EYALLAAGKEIPFELRARARRDQVRAT R+IASID LFEASGATAL + P+QRFWR Sbjct 301 VGEEYALLAAGKEIPFELRARARRDQVRATARAIASIDLLFEASGATALGIDQPVQRFWR 360 Query 361 DAHAGRVHAANDPERAYVIFGNHEFGLPPGDTMV 394 DAHAGRVHAAN+PERAY+IFGN FGLPP DTMV Sbjct 361 DAHAGRVHAANEPERAYLIFGNDAFGLPPQDTMV 394 >gi|118469163|ref|YP_890262.1| pigment production hydroxylase [Mycobacterium smegmatis str. MC2 155] gi|118170450|gb|ABK71346.1| pigment production hydroxylase [Mycobacterium smegmatis str. MC2 155] Length=396 Score = 689 bits (1777), Expect = 0.0, Method: Compositional matrix adjust. Identities = 321/396 (82%), Positives = 366/396 (93%), Gaps = 2/396 (0%) Query 1 VTSIQQRDAQSVLAAIDNLLPEIRDRAQATEDLRRLPDETVKALDDVGFFTLLQPQQWGG 60 +TSI+QRD Q+VLA +D+LLP++R+RAQA E+LR++P E++ LD++GFF LLQP+QWGG Sbjct 1 MTSIEQRDVQAVLAGVDDLLPKLRERAQAAEELRQIPQESIDELDEIGFFKLLQPEQWGG 60 Query 61 LQCDPALFFEATRRLASVCGSTGWVSSIVGVHNWHLALFDQRAQEEVWGEDPSTRISSSY 120 LQ DP +F+EA RRLAS CGSTGWV+SI+GVHNWHLALFDQ+AQ+EVWG+DP+ R+SSSY Sbjct 61 LQADPTVFYEAVRRLASACGSTGWVASIIGVHNWHLALFDQKAQDEVWGDDPTVRVSSSY 120 Query 121 APMGAGVVVD--GGYLVNGSWNWSSGCDHASWTFVGGPVIKDGRPVDFGSFLIPRSEYEI 178 APMGAGVV + GY+VNG+W WSSG +HA+W F+GGPVIKDGRPVDFGSFLIPR+EY I Sbjct 121 APMGAGVVTETGDGYIVNGAWQWSSGSEHATWAFLGGPVIKDGRPVDFGSFLIPRTEYTI 180 Query 179 KDVWYVVGLRGTGSNTLVVKDVFVPRHRFLSYKAMNDHTAGGLATNSAPVYKMPWGTMHP 238 DVW+VVGLRGTGSNT+VVKDVFVPRHRFLSYKAMND TAGG ATN+APVYKMPWGT+HP Sbjct 181 DDVWHVVGLRGTGSNTIVVKDVFVPRHRFLSYKAMNDGTAGGYATNTAPVYKMPWGTVHP 240 Query 239 TTISAPIVGMAYGAYAAHVEHQGKRVRAAFAGEKAKDDPFAKVRIAEAASDIDAAWRQLI 298 TTISAPIVGMAYGAYAAHVEHQGKRVRAAFAGEK+KDDPFAKVRIAEAASDIDAAWRQLI Sbjct 241 TTISAPIVGMAYGAYAAHVEHQGKRVRAAFAGEKSKDDPFAKVRIAEAASDIDAAWRQLI 300 Query 299 GNVSDEYALLAAGKEIPFELRARARRDQVRATGRSIASIDRLFEASGATALSNEAPIQRF 358 GNV +EY LL AGKEIPF+LRARARRDQVRATGR+IASID LFE++GATAL N AP+QRF Sbjct 301 GNVGEEYELLKAGKEIPFDLRARARRDQVRATGRAIASIDLLFESAGATALINTAPLQRF 360 Query 359 WRDAHAGRVHAANDPERAYVIFGNHEFGLPPGDTMV 394 WRDAHAGRVHAAN+PERAY+IFGNHEFGLPP DTMV Sbjct 361 WRDAHAGRVHAANEPERAYLIFGNHEFGLPPADTMV 396 >gi|145222055|ref|YP_001132733.1| acyl-CoA dehydrogenase type 2 [Mycobacterium gilvum PYR-GCK] gi|315446203|ref|YP_004079082.1| acyl-CoA dehydrogenase [Mycobacterium sp. Spyr1] gi|145214541|gb|ABP43945.1| Acyl-CoA dehydrogenase, type 2, C-terminal domain [Mycobacterium gilvum PYR-GCK] gi|315264506|gb|ADU01248.1| acyl-CoA dehydrogenase [Mycobacterium sp. Spyr1] Length=394 Score = 683 bits (1763), Expect = 0.0, Method: Compositional matrix adjust. Identities = 319/394 (81%), Positives = 355/394 (91%), Gaps = 0/394 (0%) Query 1 VTSIQQRDAQSVLAAIDNLLPEIRDRAQATEDLRRLPDETVKALDDVGFFTLLQPQQWGG 60 +TSI+QRDAQ+VLA +++LLP I R+ A E+LRRLPDETV LD+VGFF LLQP+QWGG Sbjct 1 MTSIEQRDAQTVLAGVNDLLPRIAKRSAAAEELRRLPDETVAELDEVGFFKLLQPEQWGG 60 Query 61 LQCDPALFFEATRRLASVCGSTGWVSSIVGVHNWHLALFDQRAQEEVWGEDPSTRISSSY 120 LQCDP LF+EA RR+AS CGSTGWVSSI+GVHNWHLALFDQ+AQE+VWG+DP+ R+SSSY Sbjct 61 LQCDPTLFYEAVRRIASACGSTGWVSSIIGVHNWHLALFDQKAQEDVWGDDPTVRVSSSY 120 Query 121 APMGAGVVVDGGYLVNGSWNWSSGCDHASWTFVGGPVIKDGRPVDFGSFLIPRSEYEIKD 180 APMGAG VVDGGYLV+G+W WSSGCDHA+W F+GGPVIKDG+PVDFGSFLIPR++Y I D Sbjct 121 APMGAGTVVDGGYLVSGAWQWSSGCDHATWAFLGGPVIKDGKPVDFGSFLIPRTDYRIDD 180 Query 181 VWYVVGLRGTGSNTLVVKDVFVPRHRFLSYKAMNDHTAGGLATNSAPVYKMPWGTMHPTT 240 VW VVGL+ TGSNT+VVKDVFVPRHRFLSYKAMND TAGG N+APVYKMPWGTMHPTT Sbjct 181 VWNVVGLKATGSNTVVVKDVFVPRHRFLSYKAMNDGTAGGYENNTAPVYKMPWGTMHPTT 240 Query 241 ISAPIVGMAYGAYAAHVEHQGKRVRAAFAGEKAKDDPFAKVRIAEAASDIDAAWRQLIGN 300 ISAPI+GMAYGAY AHVEHQGKRVRAAFAGEK+KDDPFAK+RIAEAASDIDA WRQLIGN Sbjct 241 ISAPIMGMAYGAYEAHVEHQGKRVRAAFAGEKSKDDPFAKIRIAEAASDIDAGWRQLIGN 300 Query 301 VSDEYALLAAGKEIPFELRARARRDQVRATGRSIASIDRLFEASGATALSNEAPIQRFWR 360 V DEY LL AGKEIPF LRA ARRDQVRAT R+IASID LFEASGATAL + P+QRFWR Sbjct 301 VRDEYELLQAGKEIPFSLRASARRDQVRATARAIASIDLLFEASGATALQLDQPVQRFWR 360 Query 361 DAHAGRVHAANDPERAYVIFGNHEFGLPPGDTMV 394 DAHAGRVHAAN+PERAY+IFGN FGLPP DTMV Sbjct 361 DAHAGRVHAANEPERAYLIFGNDAFGLPPQDTMV 394 >gi|120406256|ref|YP_956085.1| acyl-CoA dehydrogenase type 2 [Mycobacterium vanbaalenii PYR-1] gi|119959074|gb|ABM16079.1| Acyl-CoA dehydrogenase, type 2, C-terminal domain [Mycobacterium vanbaalenii PYR-1] Length=394 Score = 683 bits (1762), Expect = 0.0, Method: Compositional matrix adjust. Identities = 321/394 (82%), Positives = 353/394 (90%), Gaps = 0/394 (0%) Query 1 VTSIQQRDAQSVLAAIDNLLPEIRDRAQATEDLRRLPDETVKALDDVGFFTLLQPQQWGG 60 +TSIQQRDAQSVLA ID+LLP I R+QA E+LRRLPDETV LD+VGFF LLQP+QWGG Sbjct 1 MTSIQQRDAQSVLAGIDDLLPRIAKRSQAAEELRRLPDETVTELDEVGFFKLLQPEQWGG 60 Query 61 LQCDPALFFEATRRLASVCGSTGWVSSIVGVHNWHLALFDQRAQEEVWGEDPSTRISSSY 120 LQCDP +F+EA RR+AS CGSTGWV+SI+GVHNWHLALFDQ+AQEEVWG DP+ R+SSSY Sbjct 61 LQCDPTIFYEAVRRIASACGSTGWVASIIGVHNWHLALFDQQAQEEVWGSDPTVRVSSSY 120 Query 121 APMGAGVVVDGGYLVNGSWNWSSGCDHASWTFVGGPVIKDGRPVDFGSFLIPRSEYEIKD 180 APMGAG VVDGGYLV+G+W WSSGCDHA+W F+GGPVIKDG+PVDFGSFLIPR+EY I D Sbjct 121 APMGAGTVVDGGYLVSGAWQWSSGCDHATWAFLGGPVIKDGKPVDFGSFLIPRTEYRIDD 180 Query 181 VWYVVGLRGTGSNTLVVKDVFVPRHRFLSYKAMNDHTAGGLATNSAPVYKMPWGTMHPTT 240 VW VVGL+ TGSN +VVKDVFVPRHRFLSYKAMND TAGG N+APVYKMPWGTMHPTT Sbjct 181 VWNVVGLKATGSNNVVVKDVFVPRHRFLSYKAMNDGTAGGYQNNTAPVYKMPWGTMHPTT 240 Query 241 ISAPIVGMAYGAYAAHVEHQGKRVRAAFAGEKAKDDPFAKVRIAEAASDIDAAWRQLIGN 300 ISAPI+GMAYGAY AHVEHQGKRVRAAFAGEK+KDDPFAK+RIAEAASDIDA WRQLIGN Sbjct 241 ISAPIMGMAYGAYDAHVEHQGKRVRAAFAGEKSKDDPFAKIRIAEAASDIDAGWRQLIGN 300 Query 301 VSDEYALLAAGKEIPFELRARARRDQVRATGRSIASIDRLFEASGATALSNEAPIQRFWR 360 V EY LL AG+EIPF LRA ARRDQVRAT R+IASID LFEASGATAL + P+QRFWR Sbjct 301 VGAEYRLLEAGEEIPFSLRAAARRDQVRATARAIASIDLLFEASGATALQLDQPVQRFWR 360 Query 361 DAHAGRVHAANDPERAYVIFGNHEFGLPPGDTMV 394 DAHAGRVHAAN+PERAY+IFGN FGLPP DTMV Sbjct 361 DAHAGRVHAANEPERAYLIFGNDAFGLPPQDTMV 394 >gi|169627687|ref|YP_001701336.1| hypothetical protein MAB_0584 [Mycobacterium abscessus ATCC 19977] gi|169239654|emb|CAM60682.1| Conserved hypothetical protein [Mycobacterium abscessus] Length=400 Score = 656 bits (1692), Expect = 0.0, Method: Compositional matrix adjust. Identities = 313/400 (79%), Positives = 346/400 (87%), Gaps = 6/400 (1%) Query 1 VTSIQQRDAQ----SVLAAIDNLLPEIRDRAQATEDLRRLPDETVKALDDVGFFTLLQPQ 56 +T+ +QR+ SVL+ ID+LLP +R RAQ TEDLRRLPD TV L ++GFF LLQP Sbjct 1 MTTTEQREHSDEVLSVLSQIDDLLPTLRKRAQETEDLRRLPDATVAELQEIGFFKLLQPS 60 Query 57 QWGGLQCDPALFFEATRRLASVCGSTGWVSSIVGVHNWHLALFDQRAQEEVWGEDPSTRI 116 QWGG + P F+EA RRL S CGSTGWV+SI+GVHNWHLALFDQ+AQEEVWG+D R+ Sbjct 61 QWGGYETAPTTFYEAVRRLGSACGSTGWVASIIGVHNWHLALFDQQAQEEVWGDDTDVRV 120 Query 117 SSSYAPMGAGVVVDGG--YLVNGSWNWSSGCDHASWTFVGGPVIKDGRPVDFGSFLIPRS 174 SSSYAPMGAGVV D G YLVNGSWNWSSGCDHA+W F+GGPVIKDGRPVDFGSFLIPR+ Sbjct 121 SSSYAPMGAGVVTDAGDGYLVNGSWNWSSGCDHATWAFLGGPVIKDGRPVDFGSFLIPRT 180 Query 175 EYEIKDVWYVVGLRGTGSNTLVVKDVFVPRHRFLSYKAMNDHTAGGLATNSAPVYKMPWG 234 EY I DVW VVGLRGTGSNT+VVKDVFVP+HRFLSYK MND TAGG TN+APVYKMPWG Sbjct 181 EYRIDDVWNVVGLRGTGSNTVVVKDVFVPKHRFLSYKKMNDQTAGGYQTNTAPVYKMPWG 240 Query 235 TMHPTTISAPIVGMAYGAYAAHVEHQGKRVRAAFAGEKAKDDPFAKVRIAEAASDIDAAW 294 TMHPTTI+API+GMAYGAY AHVE QGKRVRAA+AGEKAKDDPF KVR+AEAASDIDA W Sbjct 241 TMHPTTITAPIMGMAYGAYDAHVEAQGKRVRAAYAGEKAKDDPFTKVRVAEAASDIDAGW 300 Query 295 RQLIGNVSDEYALLAAGKEIPFELRARARRDQVRATGRSIASIDRLFEASGATALSNEAP 354 RQLIGNV DEYAL+AAG+E+PFELRA ARRDQVRATGR+IASID LFE SGATALSN+AP Sbjct 301 RQLIGNVGDEYALIAAGQEVPFELRAAARRDQVRATGRAIASIDLLFENSGATALSNDAP 360 Query 355 IQRFWRDAHAGRVHAANDPERAYVIFGNHEFGLPPGDTMV 394 +QRFWRDAHAGRVHAAND ERAY I+GNH F LP DTMV Sbjct 361 VQRFWRDAHAGRVHAANDAERAYQIWGNHAFELPATDTMV 400 >gi|226363864|ref|YP_002781646.1| hydroxylase [Rhodococcus opacus B4] gi|226242353|dbj|BAH52701.1| putative hydroxylase [Rhodococcus opacus B4] Length=391 Score = 637 bits (1642), Expect = 1e-180, Method: Compositional matrix adjust. Identities = 300/387 (78%), Positives = 339/387 (88%), Gaps = 0/387 (0%) Query 8 DAQSVLAAIDNLLPEIRDRAQATEDLRRLPDETVKALDDVGFFTLLQPQQWGGLQCDPAL 67 D+ V+ +D LLP +R+RAQ TEDLRR+PD+++KAL + GFF LLQP+QWGG Q DP L Sbjct 5 DSHEVMQRLDALLPTLRERAQETEDLRRIPDDSMKALQETGFFRLLQPEQWGGYQADPVL 64 Query 68 FFEATRRLASVCGSTGWVSSIVGVHNWHLALFDQRAQEEVWGEDPSTRISSSYAPMGAGV 127 F+ A R++AS CGSTGWVSSI+GVHNWHLALF Q+AQE+VWG D RISSSYAPMGAG Sbjct 65 FYSAVRKIASACGSTGWVSSIIGVHNWHLALFSQQAQEDVWGNDTDVRISSSYAPMGAGQ 124 Query 128 VVDGGYLVNGSWNWSSGCDHASWTFVGGPVIKDGRPVDFGSFLIPRSEYEIKDVWYVVGL 187 VVDGGY VNG+W WSSGCDHA+W +GGPVIKDGRPVDF SFLIPR +Y I DVW VVGL Sbjct 125 VVDGGYTVNGAWAWSSGCDHATWAVLGGPVIKDGRPVDFVSFLIPRGDYRIDDVWNVVGL 184 Query 188 RGTGSNTLVVKDVFVPRHRFLSYKAMNDHTAGGLATNSAPVYKMPWGTMHPTTISAPIVG 247 RGTGSNT+VV+DVFVP HR LS+KAM+ TA GL N+APVYKMPWGT+HPTTISAPIVG Sbjct 185 RGTGSNTVVVEDVFVPTHRVLSFKAMSTLTAPGLQRNTAPVYKMPWGTIHPTTISAPIVG 244 Query 248 MAYGAYAAHVEHQGKRVRAAFAGEKAKDDPFAKVRIAEAASDIDAAWRQLIGNVSDEYAL 307 MAYGAY AHVEHQGKRVRAAFAGEKAKDDPFAKVRIAEA+SDIDAAWRQL GNV+DEYAL Sbjct 245 MAYGAYDAHVEHQGKRVRAAFAGEKAKDDPFAKVRIAEASSDIDAAWRQLSGNVADEYAL 304 Query 308 LAAGKEIPFELRARARRDQVRATGRSIASIDRLFEASGATALSNEAPIQRFWRDAHAGRV 367 L AG+E+PFELR RARRDQVRATGR+I+SID+LFE+SGATAL+N P+QRFWRDAHAGRV Sbjct 305 LVAGEEVPFELRLRARRDQVRATGRAISSIDKLFESSGATALANGTPLQRFWRDAHAGRV 364 Query 368 HAANDPERAYVIFGNHEFGLPPGDTMV 394 HAANDPERAYV++G EFGLP DTMV Sbjct 365 HAANDPERAYVMYGTGEFGLPVTDTMV 391 >gi|289572222|ref|ZP_06452449.1| oxidoreductase [Mycobacterium tuberculosis K85] gi|289536653|gb|EFD41231.1| oxidoreductase [Mycobacterium tuberculosis K85] Length=310 Score = 635 bits (1639), Expect = 3e-180, Method: Compositional matrix adjust. Identities = 309/310 (99%), Positives = 310/310 (100%), Gaps = 0/310 (0%) Query 85 VSSIVGVHNWHLALFDQRAQEEVWGEDPSTRISSSYAPMGAGVVVDGGYLVNGSWNWSSG 144 +SSIVGVHNWHLALFDQRAQEEVWGEDPSTRISSSYAPMGAGVVVDGGYLVNGSWNWSSG Sbjct 1 MSSIVGVHNWHLALFDQRAQEEVWGEDPSTRISSSYAPMGAGVVVDGGYLVNGSWNWSSG 60 Query 145 CDHASWTFVGGPVIKDGRPVDFGSFLIPRSEYEIKDVWYVVGLRGTGSNTLVVKDVFVPR 204 CDHASWTFVGGPVIKDGRPVDFGSFLIPRSEYEIKDVWYVVGLRGTGSNTLVVKDVFVPR Sbjct 61 CDHASWTFVGGPVIKDGRPVDFGSFLIPRSEYEIKDVWYVVGLRGTGSNTLVVKDVFVPR 120 Query 205 HRFLSYKAMNDHTAGGLATNSAPVYKMPWGTMHPTTISAPIVGMAYGAYAAHVEHQGKRV 264 HRFLSYKAMNDHTAGGLATNSAPVYKMPWGTMHPTTISAPIVGMAYGAYAAHVEHQGKRV Sbjct 121 HRFLSYKAMNDHTAGGLATNSAPVYKMPWGTMHPTTISAPIVGMAYGAYAAHVEHQGKRV 180 Query 265 RAAFAGEKAKDDPFAKVRIAEAASDIDAAWRQLIGNVSDEYALLAAGKEIPFELRARARR 324 RAAFAGEKAKDDPFAKVRIAEAASDIDAAWRQLIGNVSDEYALLAAGKEIPFELRARARR Sbjct 181 RAAFAGEKAKDDPFAKVRIAEAASDIDAAWRQLIGNVSDEYALLAAGKEIPFELRARARR 240 Query 325 DQVRATGRSIASIDRLFEASGATALSNEAPIQRFWRDAHAGRVHAANDPERAYVIFGNHE 384 DQVRATGRSIASIDRLFEASGATALSNEAPIQRFWRDAHAGRVHAANDPERAYVIFGNHE Sbjct 241 DQVRATGRSIASIDRLFEASGATALSNEAPIQRFWRDAHAGRVHAANDPERAYVIFGNHE 300 Query 385 FGLPPGDTMV 394 FGLPPGDTMV Sbjct 301 FGLPPGDTMV 310 >gi|312138146|ref|YP_004005482.1| acyl-CoA dehydrogenase [Rhodococcus equi 103S] gi|325674949|ref|ZP_08154636.1| pigment production hydroxylase [Rhodococcus equi ATCC 33707] gi|311887485|emb|CBH46797.1| acyl-CoA dehydrogenase [Rhodococcus equi 103S] gi|325554535|gb|EGD24210.1| pigment production hydroxylase [Rhodococcus equi ATCC 33707] Length=391 Score = 635 bits (1637), Expect = 5e-180, Method: Compositional matrix adjust. Identities = 299/387 (78%), Positives = 338/387 (88%), Gaps = 0/387 (0%) Query 8 DAQSVLAAIDNLLPEIRDRAQATEDLRRLPDETVKALDDVGFFTLLQPQQWGGLQCDPAL 67 D+ V+ ID LLP +R+RAQ TEDLRR+PDE++KAL + GFF L+QP+QWGGL+ DP Sbjct 5 DSHEVMQRIDALLPVLRERAQETEDLRRIPDESIKALQETGFFRLVQPKQWGGLESDPVT 64 Query 68 FFEATRRLASVCGSTGWVSSIVGVHNWHLALFDQRAQEEVWGEDPSTRISSSYAPMGAGV 127 F+ A R +AS CGSTGWV+ I+G+HNWHLALFDQ+AQE+VWG+D RISSSYAPMGAG Sbjct 65 FYTAVRNIASACGSTGWVAGILGIHNWHLALFDQQAQEDVWGKDTDVRISSSYAPMGAGE 124 Query 128 VVDGGYLVNGSWNWSSGCDHASWTFVGGPVIKDGRPVDFGSFLIPRSEYEIKDVWYVVGL 187 ++GGY VNG+W WSSGCDHASW VGGPVIKDGRPVDFGSFLIPR +YEI DVW VVGL Sbjct 125 AIEGGYKVNGAWAWSSGCDHASWVVVGGPVIKDGRPVDFGSFLIPREDYEIDDVWNVVGL 184 Query 188 RGTGSNTLVVKDVFVPRHRFLSYKAMNDHTAGGLATNSAPVYKMPWGTMHPTTISAPIVG 247 +GTGSNT+VVKDVFVPRHRFLS+KAM+D TA GL N+APVYKMPWGT+HPTTIS+PIVG Sbjct 185 KGTGSNTVVVKDVFVPRHRFLSFKAMSDLTAPGLQQNTAPVYKMPWGTIHPTTISSPIVG 244 Query 248 MAYGAYAAHVEHQGKRVRAAFAGEKAKDDPFAKVRIAEAASDIDAAWRQLIGNVSDEYAL 307 MAYGAY AHVEHQGKRVRAA+AGEKAKDDPFAK+RIAEA+SDIDAAWRQL GNV+DEYA Sbjct 245 MAYGAYEAHVEHQGKRVRAAYAGEKAKDDPFAKIRIAEASSDIDAAWRQLSGNVADEYAH 304 Query 308 LAAGKEIPFELRARARRDQVRATGRSIASIDRLFEASGATALSNEAPIQRFWRDAHAGRV 367 L AG+E+P ELR RARRDQVRATGR+IASID LFE SGATAL+N PIQRFWRDAHAGRV Sbjct 305 LLAGEEVPMELRLRARRDQVRATGRAIASIDLLFENSGATALANGTPIQRFWRDAHAGRV 364 Query 368 HAANDPERAYVIFGNHEFGLPPGDTMV 394 HAAND ERAYV+FG EFGLP DTMV Sbjct 365 HAANDAERAYVMFGGAEFGLPLTDTMV 391 >gi|111021511|ref|YP_704483.1| 3-HSA hydroxylase, oxygenase [Rhodococcus jostii RHA1] gi|123340107|sp|Q0S811.1|HSAA_RHOSR RecName: Full=Flavin-dependent monooxygenase, oxygenase subunit; AltName: Full=3-hydroxy-9,10-seconandrost-1,3,5(10)-triene-9,17-dione 4-hydroxylase gi|110821041|gb|ABG96325.1| 3-HSA hydroxylase, oxygenase [Rhodococcus jostii RHA1] Length=382 Score = 634 bits (1635), Expect = 8e-180, Method: Compositional matrix adjust. Identities = 299/379 (79%), Positives = 336/379 (89%), Gaps = 0/379 (0%) Query 16 IDNLLPEIRDRAQATEDLRRLPDETVKALDDVGFFTLLQPQQWGGLQCDPALFFEATRRL 75 +D LLP +R+RAQ TEDLRR+PD+++KAL + GFF LLQP+QWGG Q DP LF+ A R++ Sbjct 4 LDALLPTLRERAQETEDLRRIPDDSMKALQETGFFRLLQPEQWGGYQADPVLFYSAVRKI 63 Query 76 ASVCGSTGWVSSIVGVHNWHLALFDQRAQEEVWGEDPSTRISSSYAPMGAGVVVDGGYLV 135 AS CGSTGWVSSI+GVHNWHLALF Q+AQE+VWG D RISSSYAPMGAG VVDGGY V Sbjct 64 ASACGSTGWVSSIIGVHNWHLALFSQQAQEDVWGNDTDVRISSSYAPMGAGQVVDGGYTV 123 Query 136 NGSWNWSSGCDHASWTFVGGPVIKDGRPVDFGSFLIPRSEYEIKDVWYVVGLRGTGSNTL 195 NG+W WSSGCDHASW +GGPVIKDGRPVDF SFLIPR +Y I DVW VVGLRGTGSNT+ Sbjct 124 NGAWAWSSGCDHASWAVLGGPVIKDGRPVDFVSFLIPREDYRIDDVWNVVGLRGTGSNTV 183 Query 196 VVKDVFVPRHRFLSYKAMNDHTAGGLATNSAPVYKMPWGTMHPTTISAPIVGMAYGAYAA 255 VV+DVFVP HR LS+KAM++ TA GL N+APVYKMPWGT+HPTTISAPIVGMAYGAY A Sbjct 184 VVEDVFVPTHRVLSFKAMSNLTAPGLERNTAPVYKMPWGTIHPTTISAPIVGMAYGAYDA 243 Query 256 HVEHQGKRVRAAFAGEKAKDDPFAKVRIAEAASDIDAAWRQLIGNVSDEYALLAAGKEIP 315 HVEHQGKRVRAAFAGEKAKDDPFAKVRIAEA+SDIDAAWRQL GNV+DEYALL AG+E+P Sbjct 244 HVEHQGKRVRAAFAGEKAKDDPFAKVRIAEASSDIDAAWRQLSGNVADEYALLVAGEEVP 303 Query 316 FELRARARRDQVRATGRSIASIDRLFEASGATALSNEAPIQRFWRDAHAGRVHAANDPER 375 FELR RARRDQVRATGR+I+SID+LFE+SGATAL+N P+QRFWRDAHAGRVHAANDPER Sbjct 304 FELRLRARRDQVRATGRAISSIDKLFESSGATALANGTPLQRFWRDAHAGRVHAANDPER 363 Query 376 AYVIFGNHEFGLPPGDTMV 394 AYV++G EFGLP DTMV Sbjct 364 AYVMYGTGEFGLPITDTMV 382 >gi|229494610|ref|ZP_04388373.1| pigment production hydroxylase [Rhodococcus erythropolis SK121] gi|229318972|gb|EEN84830.1| pigment production hydroxylase [Rhodococcus erythropolis SK121] Length=403 Score = 630 bits (1626), Expect = 9e-179, Method: Compositional matrix adjust. Identities = 295/393 (76%), Positives = 337/393 (86%), Gaps = 0/393 (0%) Query 2 TSIQQRDAQSVLAAIDNLLPEIRDRAQATEDLRRLPDETVKALDDVGFFTLLQPQQWGGL 61 + D+ V+ +D LLP +R+RAQ TEDLRR+PDE++KAL + GFF LLQP+QWGG Sbjct 11 VEVGNHDSHEVMQRLDALLPALRERAQETEDLRRIPDESIKALQETGFFRLLQPKQWGGY 70 Query 62 QCDPALFFEATRRLASVCGSTGWVSSIVGVHNWHLALFDQRAQEEVWGEDPSTRISSSYA 121 + DP LF+ A +++AS CGSTGWVSSI+GVHNWHLALF Q+AQE+VWG D RISSSYA Sbjct 71 EADPVLFYSAVKKIASACGSTGWVSSIIGVHNWHLALFSQQAQEDVWGNDTDVRISSSYA 130 Query 122 PMGAGVVVDGGYLVNGSWNWSSGCDHASWTFVGGPVIKDGRPVDFGSFLIPRSEYEIKDV 181 PMG G VV+GGY VNG+W WSSGCDHASW +GGPV KDGR VDF S+LIPR +Y+I DV Sbjct 131 PMGMGEVVEGGYKVNGAWAWSSGCDHASWAVLGGPVFKDGRAVDFVSYLIPREDYQIDDV 190 Query 182 WYVVGLRGTGSNTLVVKDVFVPRHRFLSYKAMNDHTAGGLATNSAPVYKMPWGTMHPTTI 241 W VVGLRGTGSNT+VVKDVFVP+HR LS++AM++ TA GL N+APVYKMPWGT+HPTTI Sbjct 191 WNVVGLRGTGSNTVVVKDVFVPKHRVLSFRAMSELTAPGLEKNTAPVYKMPWGTIHPTTI 250 Query 242 SAPIVGMAYGAYAAHVEHQGKRVRAAFAGEKAKDDPFAKVRIAEAASDIDAAWRQLIGNV 301 SAPIVGMAYGAY AHVEHQGKRVRAAFAGEK+KDDPFAKVRIAEA+SDIDAAWRQL GNV Sbjct 251 SAPIVGMAYGAYEAHVEHQGKRVRAAFAGEKSKDDPFAKVRIAEASSDIDAAWRQLSGNV 310 Query 302 SDEYALLAAGKEIPFELRARARRDQVRATGRSIASIDRLFEASGATALSNEAPIQRFWRD 361 +DEYAL+ AG+E+P ELR RARRDQVRATGR+IASID+LFE SGATAL N PIQRFWRD Sbjct 311 ADEYALILAGEEVPMELRLRARRDQVRATGRAIASIDKLFENSGATALQNGTPIQRFWRD 370 Query 362 AHAGRVHAANDPERAYVIFGNHEFGLPPGDTMV 394 AHAGRVHAANDPERAYV+FG EFGLP DTMV Sbjct 371 AHAGRVHAANDPERAYVMFGTGEFGLPITDTMV 403 >gi|226304244|ref|YP_002764202.1| hydroxylase [Rhodococcus erythropolis PR4] gi|226183359|dbj|BAH31463.1| putative hydroxylase [Rhodococcus erythropolis PR4] Length=403 Score = 627 bits (1618), Expect = 8e-178, Method: Compositional matrix adjust. Identities = 294/391 (76%), Positives = 335/391 (86%), Gaps = 0/391 (0%) Query 4 IQQRDAQSVLAAIDNLLPEIRDRAQATEDLRRLPDETVKALDDVGFFTLLQPQQWGGLQC 63 + D+ V+ +D LLP +R+RAQ TEDLRR+PDE++K L + GFF LLQP+QWGG + Sbjct 13 VGNHDSHEVMQRLDALLPALRERAQETEDLRRIPDESIKGLQETGFFRLLQPKQWGGYEA 72 Query 64 DPALFFEATRRLASVCGSTGWVSSIVGVHNWHLALFDQRAQEEVWGEDPSTRISSSYAPM 123 DP LF+ A +++AS CGSTGWVSSI+GVHNWHLALF Q+AQE+VWG D RISSSYAPM Sbjct 73 DPVLFYSAVKKIASACGSTGWVSSIIGVHNWHLALFSQQAQEDVWGNDTDVRISSSYAPM 132 Query 124 GAGVVVDGGYLVNGSWNWSSGCDHASWTFVGGPVIKDGRPVDFGSFLIPRSEYEIKDVWY 183 G G VV+GGY VNG+W WSSGCDHASW +GGPV KDGR VDF S+LIPR +Y+I DVW Sbjct 133 GMGEVVEGGYKVNGAWAWSSGCDHASWAVLGGPVFKDGRAVDFVSYLIPREDYQIDDVWN 192 Query 184 VVGLRGTGSNTLVVKDVFVPRHRFLSYKAMNDHTAGGLATNSAPVYKMPWGTMHPTTISA 243 VVGLRGTGSNT+VVKDVFVP HR LS++AM++ TA GL N+APVYKMPWGT+HPTTISA Sbjct 193 VVGLRGTGSNTVVVKDVFVPTHRVLSFRAMSELTAPGLENNTAPVYKMPWGTIHPTTISA 252 Query 244 PIVGMAYGAYAAHVEHQGKRVRAAFAGEKAKDDPFAKVRIAEAASDIDAAWRQLIGNVSD 303 PIVGMAYGAY AHVEHQGKRVRAAFAGEK+KDDPFAKVRIAEA+SDIDAAWRQL GNV+D Sbjct 253 PIVGMAYGAYEAHVEHQGKRVRAAFAGEKSKDDPFAKVRIAEASSDIDAAWRQLSGNVAD 312 Query 304 EYALLAAGKEIPFELRARARRDQVRATGRSIASIDRLFEASGATALSNEAPIQRFWRDAH 363 EYAL+ AG+E+P ELR RARRDQVRATGR+IASID+LFE SGATAL N PIQRFWRDAH Sbjct 313 EYALILAGEEVPMELRLRARRDQVRATGRAIASIDKLFENSGATALQNGTPIQRFWRDAH 372 Query 364 AGRVHAANDPERAYVIFGNHEFGLPPGDTMV 394 AGRVHAANDPERAYV+FG EFGLP DTMV Sbjct 373 AGRVHAANDPERAYVMFGTGEFGLPITDTMV 403 >gi|158430833|pdb|2RFQ|A Chain A, Crystal Structure Of 3-Hsa Hydroxylase From Rhodococcus Sp. Rha1 gi|158430834|pdb|2RFQ|B Chain B, Crystal Structure Of 3-Hsa Hydroxylase From Rhodococcus Sp. Rha1 gi|158430835|pdb|2RFQ|C Chain C, Crystal Structure Of 3-Hsa Hydroxylase From Rhodococcus Sp. Rha1 gi|158430836|pdb|2RFQ|D Chain D, Crystal Structure Of 3-Hsa Hydroxylase From Rhodococcus Sp. Rha1 Length=394 Score = 620 bits (1600), Expect = 1e-175, Method: Compositional matrix adjust. Identities = 296/391 (76%), Positives = 333/391 (86%), Gaps = 0/391 (0%) Query 4 IQQRDAQSVLAAIDNLLPEIRDRAQATEDLRRLPDETVKALDDVGFFTLLQPQQWGGLQC 63 + D+ V +D LLP +R+RAQ TEDLRR+PD++ KAL + GFF LLQP+QWGG Q Sbjct 4 VGDHDSHEVXQRLDALLPTLRERAQETEDLRRIPDDSXKALQETGFFRLLQPEQWGGYQA 63 Query 64 DPALFFEATRRLASVCGSTGWVSSIVGVHNWHLALFDQRAQEEVWGEDPSTRISSSYAPM 123 DP LF+ A R++AS CGSTGWVSSI+GVHNWHLALF Q+AQE+VWG D RISSSYAP Sbjct 64 DPVLFYSAVRKIASACGSTGWVSSIIGVHNWHLALFSQQAQEDVWGNDTDVRISSSYAPX 123 Query 124 GAGVVVDGGYLVNGSWNWSSGCDHASWTFVGGPVIKDGRPVDFGSFLIPRSEYEIKDVWY 183 GAG VVDGGY VNG+W WSSGCDHASW +GGPVIKDGRPVDF SFLIPR +Y I DVW Sbjct 124 GAGQVVDGGYTVNGAWAWSSGCDHASWAVLGGPVIKDGRPVDFVSFLIPREDYRIDDVWN 183 Query 184 VVGLRGTGSNTLVVKDVFVPRHRFLSYKAMNDHTAGGLATNSAPVYKMPWGTMHPTTISA 243 VVGLRGTGSNT+VV+DVFVP HR LS+KA ++ TA GL N+APVYK PWGT+HPTTISA Sbjct 184 VVGLRGTGSNTVVVEDVFVPTHRVLSFKAXSNLTAPGLERNTAPVYKXPWGTIHPTTISA 243 Query 244 PIVGMAYGAYAAHVEHQGKRVRAAFAGEKAKDDPFAKVRIAEAASDIDAAWRQLIGNVSD 303 PIVG AYGAY AHVEHQGKRVRAAFAGEKAKDDPFAKVRIAEA+SDIDAAWRQL GNV+D Sbjct 244 PIVGXAYGAYDAHVEHQGKRVRAAFAGEKAKDDPFAKVRIAEASSDIDAAWRQLSGNVAD 303 Query 304 EYALLAAGKEIPFELRARARRDQVRATGRSIASIDRLFEASGATALSNEAPIQRFWRDAH 363 EYALL AG+E+PFELR RARRDQVRATGR+I+SID+LFE+SGATAL+N P+QRFWRDAH Sbjct 304 EYALLVAGEEVPFELRLRARRDQVRATGRAISSIDKLFESSGATALANGTPLQRFWRDAH 363 Query 364 AGRVHAANDPERAYVIFGNHEFGLPPGDTMV 394 AGRVHAANDPERAYV +G EFGLP DT V Sbjct 364 AGRVHAANDPERAYVXYGTGEFGLPITDTXV 394 >gi|343925871|ref|ZP_08765386.1| putative hydroxylase [Gordonia alkanivorans NBRC 16433] gi|343764222|dbj|GAA12312.1| putative hydroxylase [Gordonia alkanivorans NBRC 16433] Length=394 Score = 618 bits (1593), Expect = 6e-175, Method: Compositional matrix adjust. Identities = 291/386 (76%), Positives = 329/386 (86%), Gaps = 0/386 (0%) Query 9 AQSVLAAIDNLLPEIRDRAQATEDLRRLPDETVKALDDVGFFTLLQPQQWGGLQCDPALF 68 A+ VL I+ LLPEI RAQ+TEDLRR+P+ETV +L+ GFF L+QP+QWGG Q DP F Sbjct 9 AEQVLEKINALLPEIEQRAQSTEDLRRIPEETVSSLETAGFFKLMQPEQWGGYQVDPVTF 68 Query 69 FEATRRLASVCGSTGWVSSIVGVHNWHLALFDQRAQEEVWGEDPSTRISSSYAPMGAGVV 128 +EA RR+AS CGSTGWVS I+G+HNWHLALFDQ+AQE+VWG+DP+ RISSSYAPMG G V Sbjct 69 YEAVRRIASACGSTGWVSGIIGIHNWHLALFDQQAQEDVWGKDPNVRISSSYAPMGMGEV 128 Query 129 VDGGYLVNGSWNWSSGCDHASWTFVGGPVIKDGRPVDFGSFLIPRSEYEIKDVWYVVGLR 188 VDGGY VNGSW WSSGCD A W FVGGPVIK+G+PVDF SFLIPR +Y IKDVW VVGLR Sbjct 129 VDGGYKVNGSWAWSSGCDTADWVFVGGPVIKNGKPVDFVSFLIPREDYTIKDVWNVVGLR 188 Query 189 GTGSNTLVVKDVFVPRHRFLSYKAMNDHTAGGLATNSAPVYKMPWGTMHPTTISAPIVGM 248 GTGSNT+ VKDVFVPRHR LS + M+ + GL N+APVYKMPWGT+HP+TI+ PIVGM Sbjct 189 GTGSNTIEVKDVFVPRHRMLSMRTMSMGQSPGLEQNTAPVYKMPWGTIHPSTIATPIVGM 248 Query 249 AYGAYAAHVEHQGKRVRAAFAGEKAKDDPFAKVRIAEAASDIDAAWRQLIGNVSDEYALL 308 A+GAY AHVEHQGKRVRAA+AGEKAKDDPFAKVRIAEAASDIDAAWRQL GN+ EY L+ Sbjct 249 AFGAYHAHVEHQGKRVRAAYAGEKAKDDPFAKVRIAEAASDIDAAWRQLSGNLQAEYDLI 308 Query 309 AAGKEIPFELRARARRDQVRATGRSIASIDRLFEASGATALSNEAPIQRFWRDAHAGRVH 368 AG+E+P ELR ARRDQVRATGR+I++IDRLFE SGA AL N PIQRFWRDAHAGRVH Sbjct 309 LAGEEVPMELRLAARRDQVRATGRAISAIDRLFENSGAHALENGTPIQRFWRDAHAGRVH 368 Query 369 AANDPERAYVIFGNHEFGLPPGDTMV 394 AANDPERAYV FGN EFG+P GDTMV Sbjct 369 AANDPERAYVAFGNGEFGIPIGDTMV 394 >gi|262200917|ref|YP_003272125.1| acyl-CoA dehydrogenase type 2 domain-containing protein [Gordonia bronchialis DSM 43247] gi|262084264|gb|ACY20232.1| Acyl-CoA dehydrogenase type 2 domain protein [Gordonia bronchialis DSM 43247] Length=394 Score = 615 bits (1586), Expect = 4e-174, Method: Compositional matrix adjust. Identities = 293/386 (76%), Positives = 327/386 (85%), Gaps = 0/386 (0%) Query 9 AQSVLAAIDNLLPEIRDRAQATEDLRRLPDETVKALDDVGFFTLLQPQQWGGLQCDPALF 68 A+ VL I+ LLPEI RAQ TEDLRR+PDETV +L+ GFF L+QP+QWGG Q DP F Sbjct 9 AEQVLEKINALLPEIEQRAQQTEDLRRIPDETVSSLEGAGFFKLMQPEQWGGYQVDPVTF 68 Query 69 FEATRRLASVCGSTGWVSSIVGVHNWHLALFDQRAQEEVWGEDPSTRISSSYAPMGAGVV 128 +EA RR+AS CGSTGWVS I+G+HNWHLALFDQ+AQE+VWG D S RISSSYAPMG G V Sbjct 69 YEAVRRIASACGSTGWVSGIIGIHNWHLALFDQQAQEDVWGADTSVRISSSYAPMGMGEV 128 Query 129 VDGGYLVNGSWNWSSGCDHASWTFVGGPVIKDGRPVDFGSFLIPRSEYEIKDVWYVVGLR 188 VDGGY VNGSW WSSGC+ A W FVGGPVIK+G+PVDF SFLIPRS+Y IKDVW VVGLR Sbjct 129 VDGGYKVNGSWAWSSGCEIADWVFVGGPVIKNGKPVDFVSFLIPRSDYTIKDVWNVVGLR 188 Query 189 GTGSNTLVVKDVFVPRHRFLSYKAMNDHTAGGLATNSAPVYKMPWGTMHPTTISAPIVGM 248 GTGSNT+ VKDVFVPRHR LS + M+ + GL N+APVYKMPWGT+HP+TIS+PIVGM Sbjct 189 GTGSNTIEVKDVFVPRHRMLSMRTMSMGQSPGLERNTAPVYKMPWGTIHPSTISSPIVGM 248 Query 249 AYGAYAAHVEHQGKRVRAAFAGEKAKDDPFAKVRIAEAASDIDAAWRQLIGNVSDEYALL 308 AYGAY AHVEHQGKRVRAA+AGEKAK+DPFAKVRIAEAASDIDAAWRQL GN+ EY L+ Sbjct 249 AYGAYHAHVEHQGKRVRAAYAGEKAKEDPFAKVRIAEAASDIDAAWRQLSGNLQAEYDLI 308 Query 309 AAGKEIPFELRARARRDQVRATGRSIASIDRLFEASGATALSNEAPIQRFWRDAHAGRVH 368 AG+E+P ELR ARRDQVRATGR+IA+ID LFE SGA AL N PIQRFWRDAHAGRVH Sbjct 309 LAGEEVPMELRLAARRDQVRATGRAIAAIDLLFENSGAHALENGTPIQRFWRDAHAGRVH 368 Query 369 AANDPERAYVIFGNHEFGLPPGDTMV 394 AANDPERAYV FGN EFG+P GDTMV Sbjct 369 AANDPERAYVAFGNGEFGIPIGDTMV 394 >gi|54022438|ref|YP_116680.1| hypothetical protein nfa4740 [Nocardia farcinica IFM 10152] gi|54013946|dbj|BAD55316.1| hypothetical protein [Nocardia farcinica IFM 10152] Length=387 Score = 605 bits (1561), Expect = 3e-171, Method: Compositional matrix adjust. Identities = 289/385 (76%), Positives = 334/385 (87%), Gaps = 0/385 (0%) Query 10 QSVLAAIDNLLPEIRDRAQATEDLRRLPDETVKALDDVGFFTLLQPQQWGGLQCDPALFF 69 Q V ++ LLP +R+RAQ EDLRR+PDET+K+L + GFF LLQP+QWGG DP +F+ Sbjct 3 QEVTERVEALLPTLRERAQEAEDLRRIPDETMKSLQETGFFRLLQPKQWGGYAADPVVFY 62 Query 70 EATRRLASVCGSTGWVSSIVGVHNWHLALFDQRAQEEVWGEDPSTRISSSYAPMGAGVVV 129 + RR+A+ CGSTGWV+ I+GVHNWHLALFDQ+AQE+VWGED RISSSYAPMGAG V Sbjct 63 DTVRRIAAACGSTGWVAGIIGVHNWHLALFDQQAQEDVWGEDTEVRISSSYAPMGAGTAV 122 Query 130 DGGYLVNGSWNWSSGCDHASWTFVGGPVIKDGRPVDFGSFLIPRSEYEIKDVWYVVGLRG 189 + GY V+GSW WSSG DHA+W VGGPVIKDG+PVDFGSFLIPRS+Y I DVW VVGLRG Sbjct 123 EDGYRVSGSWAWSSGSDHATWVVVGGPVIKDGKPVDFGSFLIPRSDYRIDDVWNVVGLRG 182 Query 190 TGSNTLVVKDVFVPRHRFLSYKAMNDHTAGGLATNSAPVYKMPWGTMHPTTISAPIVGMA 249 TGSNT+VV+DVFVPRHRFLS++AMN+ + GL N+ PVYKMPWGT+HPTTIS PIVGMA Sbjct 183 TGSNTVVVEDVFVPRHRFLSFRAMNEMKSPGLERNTDPVYKMPWGTIHPTTISTPIVGMA 242 Query 250 YGAYAAHVEHQGKRVRAAFAGEKAKDDPFAKVRIAEAASDIDAAWRQLIGNVSDEYALLA 309 YGAYAAHVEHQGKR+RAA+AGEKAKDDPF KVR+AEA+SDIDAAWRQL GNV++EYALL Sbjct 243 YGAYAAHVEHQGKRIRAAYAGEKAKDDPFTKVRVAEASSDIDAAWRQLSGNVAEEYALLK 302 Query 310 AGKEIPFELRARARRDQVRATGRSIASIDRLFEASGATALSNEAPIQRFWRDAHAGRVHA 369 GKE+PF+LR RARRDQVRATGR+IASID+LFEASGATAL+N P+QRFWRDAHAGRVHA Sbjct 303 EGKEVPFDLRVRARRDQVRATGRAIASIDKLFEASGATALANGTPLQRFWRDAHAGRVHA 362 Query 370 ANDPERAYVIFGNHEFGLPPGDTMV 394 ANDPERAYV++G HEFGLP D MV Sbjct 363 ANDPERAYVMYGTHEFGLPVTDGMV 387 >gi|326384576|ref|ZP_08206255.1| acyl-CoA dehydrogenase type 2 domain-containing protein [Gordonia neofelifaecis NRRL B-59395] gi|326196710|gb|EGD53905.1| acyl-CoA dehydrogenase type 2 domain-containing protein [Gordonia neofelifaecis NRRL B-59395] Length=394 Score = 599 bits (1545), Expect = 2e-169, Method: Compositional matrix adjust. Identities = 289/386 (75%), Positives = 319/386 (83%), Gaps = 0/386 (0%) Query 9 AQSVLAAIDNLLPEIRDRAQATEDLRRLPDETVKALDDVGFFTLLQPQQWGGLQCDPALF 68 AQ VL ID LLP++ RAQ+TED RR+P E L + GFF LLQP QWGG + DP F Sbjct 9 AQQVLDKIDALLPDLAQRAQSTEDARRIPAEVADMLQETGFFKLLQPSQWGGHEADPVTF 68 Query 69 FEATRRLASVCGSTGWVSSIVGVHNWHLALFDQRAQEEVWGEDPSTRISSSYAPMGAGVV 128 +EA RRLA+ CGSTGWV+ IVGVHNWHLALF Q+AQE+VWG+DP+ RISSSYAPMG G V Sbjct 69 YEAVRRLATACGSTGWVAGIVGVHNWHLALFTQQAQEDVWGDDPNVRISSSYAPMGMGEV 128 Query 129 VDGGYLVNGSWNWSSGCDHASWTFVGGPVIKDGRPVDFGSFLIPRSEYEIKDVWYVVGLR 188 V+GGY VNG+W WSSGCD A W VGGPVIKDGRPVDF S+LIPRS+Y IKDVW VVGLR Sbjct 129 VEGGYKVNGAWAWSSGCDIADWVVVGGPVIKDGRPVDFVSYLIPRSDYHIKDVWNVVGLR 188 Query 189 GTGSNTLVVKDVFVPRHRFLSYKAMNDHTAGGLATNSAPVYKMPWGTMHPTTISAPIVGM 248 GTGSNT+ VKDVFVP HR LS+ AM+ TA GL N+APVYKMPWGT+HP+TIS PIVGM Sbjct 189 GTGSNTIEVKDVFVPTHRVLSFGAMSKGTAPGLERNTAPVYKMPWGTIHPSTISTPIVGM 248 Query 249 AYGAYAAHVEHQGKRVRAAFAGEKAKDDPFAKVRIAEAASDIDAAWRQLIGNVSDEYALL 308 AYGAYAAHVEHQGKRVRAA+AGEKAKDDPFAKVRIAEAASDIDAAWRQL GN+ EY L+ Sbjct 249 AYGAYAAHVEHQGKRVRAAYAGEKAKDDPFAKVRIAEAASDIDAAWRQLSGNLQAEYDLI 308 Query 309 AAGKEIPFELRARARRDQVRATGRSIASIDRLFEASGATALSNEAPIQRFWRDAHAGRVH 368 AG+E+P ELR ARRDQVRAT R+I SID LFE SGA AL N PIQRFWRDAHAGRVH Sbjct 309 VAGEEVPMELRLAARRDQVRATSRAIDSIDLLFENSGAHALENGTPIQRFWRDAHAGRVH 368 Query 369 AANDPERAYVIFGNHEFGLPPGDTMV 394 AANDPERAY FGN EFG+P DTMV Sbjct 369 AANDPERAYQAFGNGEFGIPITDTMV 394 >gi|289572223|ref|ZP_06452450.1| oxidoreductase [Mycobacterium tuberculosis K85] gi|289536654|gb|EFD41232.1| oxidoreductase [Mycobacterium tuberculosis K85] Length=286 Score = 562 bits (1448), Expect = 4e-158, Method: Compositional matrix adjust. Identities = 275/277 (99%), Positives = 275/277 (99%), Gaps = 0/277 (0%) Query 110 EDPSTRISSSYAPMGAGVVVDGGYLVNGSWNWSSGCDHASWTFVGGPVIKDGRPVDFGSF 169 ED TRISSSYAPMGAGVVVDGGYLVNGSWNWSSGCDHASWTFVGGPVIKDGRPVDFGSF Sbjct 10 EDRGTRISSSYAPMGAGVVVDGGYLVNGSWNWSSGCDHASWTFVGGPVIKDGRPVDFGSF 69 Query 170 LIPRSEYEIKDVWYVVGLRGTGSNTLVVKDVFVPRHRFLSYKAMNDHTAGGLATNSAPVY 229 LIPRSEYEIKDVWYVVGLRGTGSNTLVVKDVFVPRHRFLSYKAMNDHTAGGLATNSAPVY Sbjct 70 LIPRSEYEIKDVWYVVGLRGTGSNTLVVKDVFVPRHRFLSYKAMNDHTAGGLATNSAPVY 129 Query 230 KMPWGTMHPTTISAPIVGMAYGAYAAHVEHQGKRVRAAFAGEKAKDDPFAKVRIAEAASD 289 KMPWGTMHPTTISAPIVGMAYGAYAAHVEHQGKRVRAAFAGEKAKDDPFAKVRIAEAASD Sbjct 130 KMPWGTMHPTTISAPIVGMAYGAYAAHVEHQGKRVRAAFAGEKAKDDPFAKVRIAEAASD 189 Query 290 IDAAWRQLIGNVSDEYALLAAGKEIPFELRARARRDQVRATGRSIASIDRLFEASGATAL 349 IDAAWRQLIGNVSDEYALLAAGKEIPFELRARARRDQVRATGRSIASIDRLFEASGATAL Sbjct 190 IDAAWRQLIGNVSDEYALLAAGKEIPFELRARARRDQVRATGRSIASIDRLFEASGATAL 249 Query 350 SNEAPIQRFWRDAHAGRVHAANDPERAYVIFGNHEFG 386 SNEAPIQRFWRDAHAGRVHAANDPERAYVIFGNHEFG Sbjct 250 SNEAPIQRFWRDAHAGRVHAANDPERAYVIFGNHEFG 286 >gi|296141516|ref|YP_003648759.1| acyl-CoA dehydrogenase type 2 domain-containing protein [Tsukamurella paurometabola DSM 20162] gi|296029650|gb|ADG80420.1| Acyl-CoA dehydrogenase type 2 domain protein [Tsukamurella paurometabola DSM 20162] Length=391 Score = 519 bits (1336), Expect = 4e-145, Method: Compositional matrix adjust. Identities = 238/391 (61%), Positives = 306/391 (79%), Gaps = 0/391 (0%) Query 4 IQQRDAQSVLAAIDNLLPEIRDRAQATEDLRRLPDETVKALDDVGFFTLLQPQQWGGLQC 63 + ++ +VLA + LLP +RDRAQ TED RR+P E++KAL GFF LLQP ++GGL+ Sbjct 1 MSEQSVSAVLAEVAELLPTLRDRAQETEDARRVPAESIKALQKSGFFRLLQPVRYGGLEA 60 Query 64 DPALFFEATRRLASVCGSTGWVSSIVGVHNWHLALFDQRAQEEVWGEDPSTRISSSYAPM 123 DP F+ A + LAS CGSTGWV+SI+G+H W++ALFD RAQ+EVWGED T +SSSYAPM Sbjct 61 DPVEFYTAVKMLASACGSTGWVASILGIHPWNIALFDDRAQQEVWGEDQDTLVSSSYAPM 120 Query 124 GAGVVVDGGYLVNGSWNWSSGCDHASWTFVGGPVIKDGRPVDFGSFLIPRSEYEIKDVWY 183 G +V+GGY ++G W++SSGCDHA+W +GGP +DG+PVDF ++L+P S+Y + DVW Sbjct 121 GKSEIVEGGYRLSGKWSFSSGCDHATWALLGGPAFQDGKPVDFLTYLVPISDYRVNDVWR 180 Query 184 VVGLRGTGSNTLVVKDVFVPRHRFLSYKAMNDHTAGGLATNSAPVYKMPWGTMHPTTISA 243 VGLRGTGSN +VV+DVFVP HR LS++ ++ G N++P+YK+P+G++HP+TI+A Sbjct 181 TVGLRGTGSNDIVVEDVFVPAHRALSFQLVSKCKGPGQEVNTSPLYKLPFGSVHPSTITA 240 Query 244 PIVGMAYGAYAAHVEHQGKRVRAAFAGEKAKDDPFAKVRIAEAASDIDAAWRQLIGNVSD 303 PI+GMA GAY AHVEHQ RVRAA+AGE AK+DPFAKVR+AEA S+IDAAW QL N++ Sbjct 241 PIIGMAQGAYDAHVEHQRGRVRAAYAGENAKEDPFAKVRVAEAGSEIDAAWLQLTSNIAA 300 Query 304 EYALLAAGKEIPFELRARARRDQVRATGRSIASIDRLFEASGATALSNEAPIQRFWRDAH 363 EYAL+ AG++IPF LR + RRDQVR T R+I ++DR+FE SG AL+ PIQRFWRDAH Sbjct 301 EYALVKAGEKIPFNLRLKVRRDQVRGTERAIFAVDRMFENSGGRALAEGTPIQRFWRDAH 360 Query 364 AGRVHAANDPERAYVIFGNHEFGLPPGDTMV 394 AGRVHAANDPERAY +FG EFG P D MV Sbjct 361 AGRVHAANDPERAYKMFGTGEFGEPVMDGMV 391 >gi|302525664|ref|ZP_07278006.1| 3-HSA hydroxylase [Streptomyces sp. AA4] gi|302434559|gb|EFL06375.1| 3-HSA hydroxylase [Streptomyces sp. AA4] Length=389 Score = 508 bits (1309), Expect = 5e-142, Method: Compositional matrix adjust. Identities = 236/384 (62%), Positives = 297/384 (78%), Gaps = 0/384 (0%) Query 11 SVLAAIDNLLPEIRDRAQATEDLRRLPDETVKALDDVGFFTLLQPQQWGGLQCDPALFFE 70 +V+A + +LLP +R+RAQ TED RR+P E+VKAL + GFF LLQP+ +GG + DP F+ Sbjct 6 AVIAGVRDLLPVLRERAQETEDARRIPAESVKALQETGFFRLLQPKPYGGYEADPVTFYT 65 Query 71 ATRRLASVCGSTGWVSSIVGVHNWHLALFDQRAQEEVWGEDPSTRISSSYAPMGAGVVVD 130 A + +AS CGSTGWV+SI+GVH WH+ALFD +AQE+VWGED RISSSYAPMG VV+ Sbjct 66 AVKLIASACGSTGWVASILGVHPWHVALFDAKAQEDVWGEDHDVRISSSYAPMGKATVVE 125 Query 131 GGYLVNGSWNWSSGCDHASWTFVGGPVIKDGRPVDFGSFLIPRSEYEIKDVWYVVGLRGT 190 GGY ++G W++SSG DH +W +GGP DG+PVDF ++L+P S+Y I DVW VGLRGT Sbjct 126 GGYRLSGRWSFSSGSDHCTWVLLGGPAFADGKPVDFCTYLVPISDYSIVDVWDTVGLRGT 185 Query 191 GSNTLVVKDVFVPRHRFLSYKAMNDHTAGGLATNSAPVYKMPWGTMHPTTISAPIVGMAY 250 GSN +VV DVFVP+HR LS+ A + G N P+Y++P+G++HP+TI+API+GMA Sbjct 186 GSNDIVVDDVFVPKHRALSFMATSKCKTPGQEVNPGPLYRLPYGSVHPSTITAPIIGMAQ 245 Query 251 GAYAAHVEHQGKRVRAAFAGEKAKDDPFAKVRIAEAASDIDAAWRQLIGNVSDEYALLAA 310 GAY AHVEHQGKRVRAA+AGE++K+DPF+KVRIAEA S+IDAAW QL N+ + Y L Sbjct 246 GAYDAHVEHQGKRVRAAYAGEQSKEDPFSKVRIAEAGSEIDAAWLQLTHNIDELYQLACK 305 Query 311 GKEIPFELRARARRDQVRATGRSIASIDRLFEASGATALSNEAPIQRFWRDAHAGRVHAA 370 G+++PF R R RRDQVR T R+I++IDRLFE SG AL PIQRFWRDAHAGRVHAA Sbjct 306 GEKLPFSTRLRVRRDQVRGTERAISAIDRLFENSGGRALQRGTPIQRFWRDAHAGRVHAA 365 Query 371 NDPERAYVIFGNHEFGLPPGDTMV 394 ND ERAYV+FG EFGLP + MV Sbjct 366 NDAERAYVMFGTGEFGLPVENAMV 389 >gi|300784428|ref|YP_003764719.1| acyl-CoA dehydrogenase [Amycolatopsis mediterranei U32] gi|299793942|gb|ADJ44317.1| acyl-CoA dehydrogenase [Amycolatopsis mediterranei U32] gi|340525849|gb|AEK41054.1| acyl-CoA dehydrogenase [Amycolatopsis mediterranei S699] Length=387 Score = 503 bits (1294), Expect = 3e-140, Method: Compositional matrix adjust. Identities = 234/385 (61%), Positives = 298/385 (78%), Gaps = 0/385 (0%) Query 9 AQSVLAAIDNLLPEIRDRAQATEDLRRLPDETVKALDDVGFFTLLQPQQWGGLQCDPALF 68 ++ V+A + +LLP +R+RAQ TED RR+P+E+VKAL + GFF LLQP GG + DP F Sbjct 2 SEQVIAGVRDLLPVLRERAQDTEDARRVPEESVKALQETGFFKLLQPTLHGGFEADPVSF 61 Query 69 FEATRRLASVCGSTGWVSSIVGVHNWHLALFDQRAQEEVWGEDPSTRISSSYAPMGAGVV 128 + A + +AS CGSTGWV+SI+GVH WH+ALFD +AQ+EVWGED RISSSYAPMG V Sbjct 62 YTAVKLIASACGSTGWVASILGVHPWHVALFDAQAQQEVWGEDQDVRISSSYAPMGKAEV 121 Query 129 VDGGYLVNGSWNWSSGCDHASWTFVGGPVIKDGRPVDFGSFLIPRSEYEIKDVWYVVGLR 188 V+GGY ++G W++SSGCDH +W +GGP KDG+PVDF ++L+P ++Y I DVW +GLR Sbjct 122 VEGGYRLSGRWSFSSGCDHCTWVLLGGPAFKDGKPVDFCTYLLPIADYSIVDVWDTIGLR 181 Query 189 GTGSNTLVVKDVFVPRHRFLSYKAMNDHTAGGLATNSAPVYKMPWGTMHPTTISAPIVGM 248 GTGSN +VV+DVFVP+HR LS+ A + G A N P+Y++P+G++HP+TI+API+GM Sbjct 182 GTGSNDIVVEDVFVPQHRALSFIATSKCKVPGQAVNPGPLYRLPYGSVHPSTITAPIIGM 241 Query 249 AYGAYAAHVEHQGKRVRAAFAGEKAKDDPFAKVRIAEAASDIDAAWRQLIGNVSDEYALL 308 A GAY AHVEHQ KRVRAA+AGE++K+DPFAKVRIAEAAS+IDAAW QL N+ + Y L Sbjct 242 AQGAYDAHVEHQRKRVRAAYAGEQSKEDPFAKVRIAEAASEIDAAWLQLTRNIEELYELA 301 Query 309 AAGKEIPFELRARARRDQVRATGRSIASIDRLFEASGATALSNEAPIQRFWRDAHAGRVH 368 + +P +LR R RRDQVR T R+I++IDRLFE SG A+ PIQRFWRDAHAGRVH Sbjct 302 KREERLPSDLRLRVRRDQVRGTERAISAIDRLFENSGGRAIQRGTPIQRFWRDAHAGRVH 361 Query 369 AANDPERAYVIFGNHEFGLPPGDTM 393 AAND ERAYV+FG FGLP + M Sbjct 362 AANDAERAYVMFGTGVFGLPVENAM 386 >gi|333918595|ref|YP_004492176.1| 3-HSA hydroxylase [Amycolicicoccus subflavus DQS3-9A1] gi|333480816|gb|AEF39376.1| 3-HSA hydroxylase [Amycolicicoccus subflavus DQS3-9A1] Length=395 Score = 491 bits (1265), Expect = 6e-137, Method: Compositional matrix adjust. Identities = 241/387 (63%), Positives = 300/387 (78%), Gaps = 1/387 (0%) Query 9 AQSVLAAIDNLLPEIRDRAQATEDLRRLPDETVKALDDVGFFTLLQPQQWGGLQCDPALF 68 + VL ID LLP +RDRAQ E+ RR+PD+++KAL + GFF LLQP ++GG + P F Sbjct 9 SHEVLEGIDELLPVLRDRAQEAEEARRIPDDSIKALQETGFFKLLQPVRYGGFEAAPETF 68 Query 69 FEATRRLASVCGSTGWVSSIVGVHNWHLALFDQRAQEEVWGEDPSTRISSSYAPMGAGVV 128 + A R +AS CGSTGWVSSI+GVH WH+ALFD +AQEEVWG D TRISSSYAPMG V Sbjct 69 YTAVRNIASACGSTGWVSSILGVHPWHVALFDGQAQEEVWGSDTDTRISSSYAPMGKATV 128 Query 129 VDGGYLVNGSWNWSSGCDHASWTFVGGPVIK-DGRPVDFGSFLIPRSEYEIKDVWYVVGL 187 VDGGY ++G W++SSGCDHA+W +GGP +G PVDF ++L+P S+Y I DVW VGL Sbjct 129 VDGGYRLSGKWSFSSGCDHATWVLLGGPAFNAEGAPVDFCTYLLPISDYTIIDVWNTVGL 188 Query 188 RGTGSNTLVVKDVFVPRHRFLSYKAMNDHTAGGLATNSAPVYKMPWGTMHPTTISAPIVG 247 RGTGSN ++V+DVFVP+HR LS+ M+ G N +P+YK+P+G++HPTTI+API+G Sbjct 189 RGTGSNDILVEDVFVPQHRALSFLPMSKCEVPGQEVNPSPLYKLPFGSVHPTTITAPIIG 248 Query 248 MAYGAYAAHVEHQGKRVRAAFAGEKAKDDPFAKVRIAEAASDIDAAWRQLIGNVSDEYAL 307 MA GAY AHVEHQ KRVRAA+AGEK+K+DPFAKVRIA+A S+IDAAW QL+ N+++EY Sbjct 249 MAQGAYDAHVEHQRKRVRAAYAGEKSKEDPFAKVRIAQAGSEIDAAWLQLMHNINEEYRH 308 Query 308 LAAGKEIPFELRARARRDQVRATGRSIASIDRLFEASGATALSNEAPIQRFWRDAHAGRV 367 AG++IPF R R RRDQVR T R+I +IDRLFE SG AL + +PIQRFWRDAHAGRV Sbjct 309 ACAGEKIPFATRVRVRRDQVRGTERAITAIDRLFENSGGLALKSGSPIQRFWRDAHAGRV 368 Query 368 HAANDPERAYVIFGNHEFGLPPGDTMV 394 HAANDPERAY +FG EFG D+M+ Sbjct 369 HAANDPERAYQMFGTFEFGERVTDSML 395 >gi|319948615|ref|ZP_08022739.1| acyl-CoA dehydrogenase [Dietzia cinnamea P4] gi|319437696|gb|EFV92692.1| acyl-CoA dehydrogenase [Dietzia cinnamea P4] Length=391 Score = 464 bits (1193), Expect = 2e-128, Method: Compositional matrix adjust. Identities = 225/387 (59%), Positives = 280/387 (73%), Gaps = 2/387 (0%) Query 9 AQSVLAAIDNLLPEIRDRAQATEDLRRLPDETVKALDDVGFFTLLQPQQWGGLQCDPALF 68 + V+ I LLP +RAQ TEDLR++ + + LD+ GFF L QP QWGG + D F Sbjct 6 SHEVIDRIKALLPGFAERAQETEDLRKVHPQNIAELDEAGFFKLCQPAQWGGYEADMETF 65 Query 69 FEATRRLASVCGSTGWVSSIVGVHNWHLALFDQRAQEEVWGEDPSTRISSSYAPMGAGVV 128 + A +A+ C STGW +SI+G+HNWHLALF Q+AQE+VWGEDP+ RISSSYAPMGA Sbjct 66 YTAAMTIATACPSTGWCASILGIHNWHLALFPQQAQEDVWGEDPTVRISSSYAPMGAAKK 125 Query 129 VDGGYLVNGSWNWSSGCDHASWTFVGGPVI-KDGRPVDFGSFLIPRSEYEIKDVWYVVGL 187 G ++NG W+WSSG DHA W FVGGPV+ ++ + VDF +FL+ +S+YEI DVW+VVGL Sbjct 126 TADGLVLNGKWSWSSGSDHADWVFVGGPVLDENDKMVDFCTFLVEKSQYEIVDVWHVVGL 185 Query 188 RGTGSNTLVVKDVFVPRHRFLSYKAMNDHTAGGLATNSAPVYKMPWGTMHPTTISAPIVG 247 +GTGSN + VKD +P HR LS+ M A GL N+ P+YKMPWGT+HPTTIS PIVG Sbjct 186 KGTGSNDIRVKDAVIPEHRVLSFGLMAATKAPGLEVNTNPIYKMPWGTIHPTTISTPIVG 245 Query 248 MAYGAYAAHVEHQGKRVRAAFAGEKAKDDPFAKVRIAEAASDIDAAWRQLIGNVSDEYAL 307 MA+G Y H HQ RVRAAF G K KDD FAKVR+AEAA DIDAAW QL+ NV +E L Sbjct 246 MAFGCYDVHRSHQQDRVRAAF-GTKVKDDLFAKVRLAEAAGDIDAAWLQLMRNVREEQDL 304 Query 308 LAAGKEIPFELRARARRDQVRATGRSIASIDRLFEASGATALSNEAPIQRFWRDAHAGRV 367 + AG ++R RARRDQVRAT RSI +I LF+ SGA AL +PIQRFWRDA+AGRV Sbjct 305 IKAGDFPGMDIRTRARRDQVRATQRSIDAIGLLFQNSGARALEATSPIQRFWRDANAGRV 364 Query 368 HAANDPERAYVIFGNHEFGLPPGDTMV 394 HAAN+ +AY+++G +EFG D+MV Sbjct 365 HAANEATKAYIMYGQNEFGEKVTDSMV 391 >gi|289752283|ref|ZP_06511661.1| oxidoreductase [Mycobacterium tuberculosis T92] gi|289692870|gb|EFD60299.1| oxidoreductase [Mycobacterium tuberculosis T92] Length=214 Score = 436 bits (1121), Expect = 3e-120, Method: Compositional matrix adjust. Identities = 213/214 (99%), Positives = 214/214 (100%), Gaps = 0/214 (0%) Query 181 VWYVVGLRGTGSNTLVVKDVFVPRHRFLSYKAMNDHTAGGLATNSAPVYKMPWGTMHPTT 240 +WYVVGLRGTGSNTLVVKDVFVPRHRFLSYKAMNDHTAGGLATNSAPVYKMPWGTMHPTT Sbjct 1 MWYVVGLRGTGSNTLVVKDVFVPRHRFLSYKAMNDHTAGGLATNSAPVYKMPWGTMHPTT 60 Query 241 ISAPIVGMAYGAYAAHVEHQGKRVRAAFAGEKAKDDPFAKVRIAEAASDIDAAWRQLIGN 300 ISAPIVGMAYGAYAAHVEHQGKRVRAAFAGEKAKDDPFAKVRIAEAASDIDAAWRQLIGN Sbjct 61 ISAPIVGMAYGAYAAHVEHQGKRVRAAFAGEKAKDDPFAKVRIAEAASDIDAAWRQLIGN 120 Query 301 VSDEYALLAAGKEIPFELRARARRDQVRATGRSIASIDRLFEASGATALSNEAPIQRFWR 360 VSDEYALLAAGKEIPFELRARARRDQVRATGRSIASIDRLFEASGATALSNEAPIQRFWR Sbjct 121 VSDEYALLAAGKEIPFELRARARRDQVRATGRSIASIDRLFEASGATALSNEAPIQRFWR 180 Query 361 DAHAGRVHAANDPERAYVIFGNHEFGLPPGDTMV 394 DAHAGRVHAANDPERAYVIFGNHEFGLPPGDTMV Sbjct 181 DAHAGRVHAANDPERAYVIFGNHEFGLPPGDTMV 214 >gi|119717000|ref|YP_923965.1| acyl-CoA dehydrogenase type 2 [Nocardioides sp. JS614] gi|119537661|gb|ABL82278.1| Acyl-CoA dehydrogenase, type 2, C-terminal domain [Nocardioides sp. JS614] Length=388 Score = 434 bits (1115), Expect = 2e-119, Method: Compositional matrix adjust. Identities = 216/385 (57%), Positives = 273/385 (71%), Gaps = 3/385 (0%) Query 9 AQSVLAAIDNLLPEIRDRAQATEDLRRLPDETVKALDDVGFFTLLQPQQWGGLQCDPALF 68 +Q+VL + +LLP IR+RA E LR +PD ++K L++VGFF LLQP+++ G + DP F Sbjct 2 SQAVLDGVRDLLPGIRERADEAERLRVVPDASIKELEEVGFFRLLQPRRFDGHEADPVDF 61 Query 69 FEATRRLASVCGSTGWVSSIVGVHNWHLALFDQRAQEEVWGEDPSTRISSSYAPMGAGVV 128 + A R +A CGSTGWVSS+VGVH W +ALF RAQ+ VWG D +TR+SSSYAP G +V Sbjct 62 YTAVRDIAGACGSTGWVSSVVGVHPWQIALFPDRAQQAVWGADTATRVSSSYAPTGKALV 121 Query 129 VDGGYLVNGSWNWSSGCDHASWTFVGGPVIKD-GRPVDFGSFLIPRSEYEIKDVWYVVGL 187 DGGY ++G W++SSGCDH SW +GG V D G+ VDF +FL+PR Y I DVW VVGL Sbjct 122 ADGGYTLSGKWSFSSGCDHCSWVLLGGLVFNDEGQVVDFKTFLVPRENYTINDVWNVVGL 181 Query 188 RGTGSNTLVVKDVFVPRHRFLSYKAMNDHTAGGLATNSAPVYKMPWGTMHPTTISAPIVG 247 GTGSN +VV+DVFVP LS G N + +YK+P+ ++ TI+ PI+G Sbjct 182 SGTGSNDIVVEDVFVPEEFTLSMGDTGRCFGPGQEQNPSDLYKLPFHSIFTGTITTPIIG 241 Query 248 MAYGAYAAHVEHQGKRVRAAFAGEKAKDDPFAKVRIAEAASDIDAAWRQLIGNVSDEYAL 307 MA GAYA HVE Q KRVRAA+ GEKA DPFA VRIA+A+SDIDAAW L+ N+ +E A Sbjct 242 MALGAYAEHVEMQQKRVRAAYLGEKASLDPFAAVRIAKASSDIDAAWALLVNNIREEQAC 301 Query 308 LAAGKEIPFELRARARRDQVRATGRSIASIDRLFEASGATALSNEAPIQRFWRDAHAGRV 367 +A G++IP LR + RRDQV T R+I +ID LFEASG AL+ +QR WRDAHAGRV Sbjct 302 VARGEKIPLGLRLKVRRDQVLGTQRAIDAIDSLFEASGGRALATGTYLQRAWRDAHAGRV 361 Query 368 HAANDPERAYVIFGNHEFG--LPPG 390 HAANDPERA ++G HEFG + PG Sbjct 362 HAANDPERALQMYGAHEFGHKIDPG 386 >gi|311744290|ref|ZP_07718094.1| type 2 acyl-CoA dehydrogenase [Aeromicrobium marinum DSM 15272] gi|311312463|gb|EFQ82376.1| type 2 acyl-CoA dehydrogenase [Aeromicrobium marinum DSM 15272] Length=388 Score = 428 bits (1100), Expect = 8e-118, Method: Compositional matrix adjust. Identities = 211/379 (56%), Positives = 265/379 (70%), Gaps = 1/379 (0%) Query 9 AQSVLAAIDNLLPEIRDRAQATEDLRRLPDETVKALDDVGFFTLLQPQQWGGLQCDPALF 68 +Q+VL + +LLP RDRA+ T+ LR++P+ +VK LD+VGFF LLQP+++ GL+ DP F Sbjct 2 SQAVLDGVRDLLPGFRDRAEETDRLRQVPEASVKELDEVGFFKLLQPKRFEGLESDPLDF 61 Query 69 FEATRRLASVCGSTGWVSSIVGVHNWHLALFDQRAQEEVWGEDPSTRISSSYAPMGAGVV 128 + A +AS CGSTGW+ S+VGVH W +ALF AQ+ VWGED STR+SSSYAP G V Sbjct 62 YSAISMIASACGSTGWICSVVGVHPWQIALFHDDAQQAVWGEDTSTRVSSSYAPTGKATV 121 Query 129 VDGGYLVNGSWNWSSGCDHASWTFVGGPVIKD-GRPVDFGSFLIPRSEYEIKDVWYVVGL 187 DGGYL+ G W++SSG H SW +GG V + G+ VDF +FL+PR +YEI DVW V+GL Sbjct 122 TDGGYLLQGRWSFSSGSAHCSWVLLGGLVFDEAGQIVDFKTFLVPRDKYEIIDVWNVIGL 181 Query 188 RGTGSNTLVVKDVFVPRHRFLSYKAMNDHTAGGLATNSAPVYKMPWGTMHPTTISAPIVG 247 GTGSN +VV + F+P LS G N +YKMP+ ++ T I+APIVG Sbjct 182 AGTGSNDIVVAETFIPEEFTLSMSETGRCVGPGQEQNPGDLYKMPFHSLFTTAITAPIVG 241 Query 248 MAYGAYAAHVEHQGKRVRAAFAGEKAKDDPFAKVRIAEAASDIDAAWRQLIGNVSDEYAL 307 MA GAYA HVE Q KRVRAA+AGEKA DPFA VRIA A+S ID AW + N+ +E A Sbjct 242 MARGAYAEHVEMQQKRVRAAYAGEKASSDPFAAVRIARASSQIDGAWALCMSNIREEQAH 301 Query 308 LAAGKEIPFELRARARRDQVRATGRSIASIDRLFEASGATALSNEAPIQRFWRDAHAGRV 367 +A G++IP LR R RRDQV T R+I +ID LFEASG AL+ +QR WRDAHAGRV Sbjct 302 VAKGEKIPLSLRLRVRRDQVLGTQRAIDAIDELFEASGGRALATGTYLQRAWRDAHAGRV 361 Query 368 HAANDPERAYVIFGNHEFG 386 HAANDPERA ++G EFG Sbjct 362 HAANDPERALQMYGMFEFG 380 >gi|326331706|ref|ZP_08197994.1| putative hydroxylase [Nocardioidaceae bacterium Broad-1] gi|325950505|gb|EGD42557.1| putative hydroxylase [Nocardioidaceae bacterium Broad-1] Length=397 Score = 420 bits (1080), Expect = 2e-115, Method: Compositional matrix adjust. Identities = 214/386 (56%), Positives = 274/386 (71%), Gaps = 2/386 (0%) Query 2 TSIQQRDAQSVLAAIDNLLPEIRDRAQATEDLRRLPDETVKALDDVGFFTLLQPQQWGGL 61 T +DAQ+V + +LLP IR+RA+ TE LR +P+ +VK L++VGFF LLQP ++GGL Sbjct 5 TQRPHKDAQTVRDGVQDLLPTIRERAEETERLRVVPESSVKELEEVGFFKLLQPARFGGL 64 Query 62 QCDPALFFEATRRLASVCGSTGWVSSIVGVHNWHLALFDQRAQEEVWGEDPSTRISSSYA 121 + DP F+ R +AS CGSTGWVSS++GVH W +ALFD AQ+ VWG DP TR+SSSYA Sbjct 65 EADPVDFYTCVRDIASACGSTGWVSSVLGVHPWQIALFDDEAQQAVWGSDPDTRVSSSYA 124 Query 122 PMGAGVVVDGGYLVNGSWNWSSGCDHASWTFVGGPVIKD-GRPVDFGSFLIPRSEYEIKD 180 PMG +VDGG+ ++G W++SSGC HA+W +GG V D G+ VDF +FL+PR YEI D Sbjct 125 PMGKAALVDGGFRLSGRWSFSSGCAHATWVLLGGLVFNDEGQVVDFRTFLVPRERYEIVD 184 Query 181 VWYVVGLRGTGSNTLVVKDVFVPRHRFLSYKAMNDHTAGGLATNSAPVYKMPWGTMHPTT 240 VW VVGL GTGSN +VV+DVF+P LS G A N+ +YK+ + ++ TT Sbjct 185 VWNVVGLAGTGSNDIVVEDVFIPETFTLSMAETGRCKGPGQAVNTGDLYKLQFHSLFTTT 244 Query 241 ISAPIVGMAYGAYAAHVEHQGKRVRAAFAGEKAKDDPFAKVRIAEAASDIDAAWRQLIGN 300 I+ PI+GMA GAY HV Q RVRA++ GEKA DPFA VR+A A+SDIDAAW L+GN Sbjct 245 ITTPIIGMARGAYDEHVTMQQNRVRASY-GEKASLDPFAAVRVATASSDIDAAWALLMGN 303 Query 301 VSDEYALLAAGKEIPFELRARARRDQVRATGRSIASIDRLFEASGATALSNEAPIQRFWR 360 + ++ A + G++IP R R RRDQV T R+I +ID LFEASG AL+N P+QR WR Sbjct 304 IREQQAYVERGEKIPISQRLRIRRDQVLGTQRAIDAIDLLFEASGGRALANGTPLQRAWR 363 Query 361 DAHAGRVHAANDPERAYVIFGNHEFG 386 DAHAGRVHAANDPERA ++G EFG Sbjct 364 DAHAGRVHAANDPERALQMYGASEFG 389 >gi|145595196|ref|YP_001159493.1| acyl-CoA dehydrogenase type 2 [Salinispora tropica CNB-440] gi|145304533|gb|ABP55115.1| Acyl-CoA dehydrogenase, type 2, C-terminal domain [Salinispora tropica CNB-440] Length=390 Score = 412 bits (1058), Expect = 6e-113, Method: Compositional matrix adjust. Identities = 209/387 (55%), Positives = 273/387 (71%), Gaps = 1/387 (0%) Query 9 AQSVLAAIDNLLPEIRDRAQATEDLRRLPDETVKALDDVGFFTLLQPQQWGGLQCDPALF 68 A+ V+ + LLP +R+ AQ TED R L E +K+L GFF LLQP GGL+ DP F Sbjct 4 AELVVRGVRELLPVLREGAQETEDRRTLSSEHLKSLASTGFFRLLQPAWCGGLEADPTAF 63 Query 69 FEATRRLASVCGSTGWVSSIVGVHNWHLALFDQRAQEEVWGEDPSTRISSSYAPMGAGVV 128 F R +A CGSTGWV+S++GVHNW LALF +RAQ++VWG DPST +SSSYAP G Sbjct 64 FSCVRDIAGACGSTGWVASVIGVHNWQLALFPERAQQDVWGADPSTLMSSSYAPTGQIQD 123 Query 129 VDGGYLVNGSWNWSSGCDHASWTFVGGPVIKDG-RPVDFGSFLIPRSEYEIKDVWYVVGL 187 VDGGY V+G W++SSGCDHASW +GG V +G P DF +FL+P ++Y I+DVW+ +GL Sbjct 124 VDGGYRVSGRWSFSSGCDHASWVLLGGIVPGEGDAPADFRTFLLPAADYTIEDVWHTIGL 183 Query 188 RGTGSNTLVVKDVFVPRHRFLSYKAMNDHTAGGLATNSAPVYKMPWGTMHPTTISAPIVG 247 RGTGSN +VV D FVP +R LS+ G N P+Y++P+G++ P TI+API+G Sbjct 184 RGTGSNDIVVSDAFVPAYRTLSFGDTARCVCPGQEQNPGPLYRIPYGSIFPYTITAPIIG 243 Query 248 MAYGAYAAHVEHQGKRVRAAFAGEKAKDDPFAKVRIAEAASDIDAAWRQLIGNVSDEYAL 307 MA G Y AHV H RVRAA+AG +A +DP+++VR+A AA+D+DAAW L ++++ L Sbjct 244 MATGMYDAHVTHMRDRVRAAYAGVRAAEDPYSQVRVARAAADVDAAWLALTADMNELMEL 303 Query 308 LAAGKEIPFELRARARRDQVRATGRSIASIDRLFEASGATALSNEAPIQRFWRDAHAGRV 367 + AG+++P LR R RR+QVR T +I ++DRLFE SG A+ PIQRFWRDAHAGRV Sbjct 304 VTAGEKLPMRLRLRVRRNQVRGTELAIQAVDRLFENSGGRAIYTSQPIQRFWRDAHAGRV 363 Query 368 HAANDPERAYVIFGNHEFGLPPGDTMV 394 HA NDPERA ++G+ EFGL D MV Sbjct 364 HAINDPERALSMYGSGEFGLSIADAMV 390 >gi|229489207|ref|ZP_04383073.1| pigment production hydroxylase [Rhodococcus erythropolis SK121] gi|229324711|gb|EEN90466.1| pigment production hydroxylase [Rhodococcus erythropolis SK121] Length=388 Score = 409 bits (1051), Expect = 4e-112, Method: Compositional matrix adjust. Identities = 189/386 (49%), Positives = 267/386 (70%), Gaps = 1/386 (0%) Query 10 QSVLAAIDNLLPEIRDRAQATEDLRRLPDETVKALDDVGFFTLLQPQQWGGLQCDPALFF 69 VL+++ +LLP+I RAQ +D R++ + T++ L + G F++L P+++GG + DP F+ Sbjct 3 NKVLSSVRDLLPKIAARAQKVDDSRKISERTIRELSEAGVFSMLAPKRYGGAESDPVQFY 62 Query 70 EATRRLASVCGSTGWVSSIVGVHNWHLALFDQRAQEEVWGEDPSTRISSSYAPMGAGVVV 129 E R +++ CGSTGWV+S+VGVH WHLALFD RAQ +VWGED +T ISS+YAP+G V Sbjct 63 EVVRAISAACGSTGWVASVVGVHPWHLALFDDRAQADVWGEDQTTLISSAYAPVGRLTAV 122 Query 130 DGGYLVNGSWNWSSGCDHASWTFVGGPVI-KDGRPVDFGSFLIPRSEYEIKDVWYVVGLR 188 DGGY ++G W +SSGCDHASW +G V+ DGRPVDF + L+PR++YEI+DVW VVG+R Sbjct 123 DGGYELSGQWGFSSGCDHASWALLGAMVVGMDGRPVDFMTVLVPRTDYEIRDVWDVVGMR 182 Query 189 GTGSNTLVVKDVFVPRHRFLSYKAMNDHTAGGLATNSAPVYKMPWGTMHPTTISAPIVGM 248 GT SN +VV+ FVP HR G A N P+YK+P+G++ +T++AP VG+ Sbjct 183 GTASNEIVVEKAFVPEHRLKRNYETAQLRGPGQAVNPGPLYKLPFGSIFTSTVAAPCVGI 242 Query 249 AYGAYAAHVEHQGKRVRAAFAGEKAKDDPFAKVRIAEAASDIDAAWRQLIGNVSDEYALL 308 G Y +++ +RVR + G + +D FA+V +A A+S+IDAA Q+ N+ + Y L Sbjct 243 VAGCYEGYLDVMRERVRLSLGGGRFSEDQFAQVAVARASSEIDAAILQMDRNIREMYELA 302 Query 309 AAGKEIPFELRARARRDQVRATGRSIASIDRLFEASGATALSNEAPIQRFWRDAHAGRVH 368 AG+E+P +R RARRDQVRAT RS+ +ID LF+ +G +LS PI+R WRD HAG VH Sbjct 303 VAGQELPLSMRLRARRDQVRATERSVEAIDMLFKTAGGNSLSRGNPIERAWRDVHAGSVH 362 Query 369 AANDPERAYVIFGNHEFGLPPGDTMV 394 AN+PERA ++G FGLP D ++ Sbjct 363 VANEPERALALYGRAAFGLPVEDNLI 388 >gi|226308599|ref|YP_002768559.1| hydroxylase [Rhodococcus erythropolis PR4] gi|226187716|dbj|BAH35820.1| putative hydroxylase [Rhodococcus erythropolis PR4] Length=411 Score = 409 bits (1051), Expect = 5e-112, Method: Compositional matrix adjust. Identities = 189/386 (49%), Positives = 267/386 (70%), Gaps = 1/386 (0%) Query 10 QSVLAAIDNLLPEIRDRAQATEDLRRLPDETVKALDDVGFFTLLQPQQWGGLQCDPALFF 69 VL+++ +LLP+I RAQ +D R++ + T++ L + G F++L P+++GG + DP F+ Sbjct 26 NKVLSSVRDLLPKIAARAQKVDDSRKISERTIRELSEAGVFSMLAPKRYGGAESDPVQFY 85 Query 70 EATRRLASVCGSTGWVSSIVGVHNWHLALFDQRAQEEVWGEDPSTRISSSYAPMGAGVVV 129 E R +++ CGSTGWV+S+VGVH WHLALFD RAQ +VWGED +T ISS+YAP+G V Sbjct 86 EVVRAISAACGSTGWVASVVGVHPWHLALFDDRAQADVWGEDQTTLISSAYAPVGRLTAV 145 Query 130 DGGYLVNGSWNWSSGCDHASWTFVGGPVI-KDGRPVDFGSFLIPRSEYEIKDVWYVVGLR 188 DGGY ++G W +SSGCDHASW +G V+ DGRPVDF + L+PR++YEI+DVW VVG+R Sbjct 146 DGGYELSGQWGFSSGCDHASWALLGAMVVGMDGRPVDFMTVLVPRTDYEIRDVWDVVGMR 205 Query 189 GTGSNTLVVKDVFVPRHRFLSYKAMNDHTAGGLATNSAPVYKMPWGTMHPTTISAPIVGM 248 GT SN +VV+ FVP HR G A N P+YK+P+G++ +T++AP VG+ Sbjct 206 GTASNEIVVEKAFVPEHRLKRNYETAQLRGPGQAVNPGPLYKLPFGSIFTSTVAAPCVGI 265 Query 249 AYGAYAAHVEHQGKRVRAAFAGEKAKDDPFAKVRIAEAASDIDAAWRQLIGNVSDEYALL 308 G Y +++ +RVR + G + +D FA+V +A A+S+IDAA Q+ N+ + Y L Sbjct 266 VAGCYEGYLDVMRERVRLSLGGGRFSEDQFAQVAVARASSEIDAAILQMDRNIREMYELA 325 Query 309 AAGKEIPFELRARARRDQVRATGRSIASIDRLFEASGATALSNEAPIQRFWRDAHAGRVH 368 AG+E+P +R RARRDQVRAT RS+ +ID LF+ +G +LS PI+R WRD HAG VH Sbjct 326 VAGQELPLSMRLRARRDQVRATERSVEAIDMLFKTAGGNSLSRGNPIERAWRDVHAGSVH 385 Query 369 AANDPERAYVIFGNHEFGLPPGDTMV 394 AN+PERA ++G FGLP D ++ Sbjct 386 VANEPERALALYGRAAFGLPVEDNLI 411 >gi|159038443|ref|YP_001537696.1| acyl-CoA dehydrogenase type 2 [Salinispora arenicola CNS-205] gi|157917278|gb|ABV98705.1| Acyl-CoA dehydrogenase type 2 domain [Salinispora arenicola CNS-205] Length=390 Score = 409 bits (1050), Expect = 5e-112, Method: Compositional matrix adjust. Identities = 208/387 (54%), Positives = 271/387 (71%), Gaps = 1/387 (0%) Query 9 AQSVLAAIDNLLPEIRDRAQATEDLRRLPDETVKALDDVGFFTLLQPQQWGGLQCDPALF 68 A+ V + LLP +RDRAQ TED R L E +K+L GFF LLQP GGL+ DP F Sbjct 4 AELVTRGVRELLPVLRDRAQETEDRRTLSSEHLKSLASTGFFRLLQPAWCGGLEADPVTF 63 Query 69 FEATRRLASVCGSTGWVSSIVGVHNWHLALFDQRAQEEVWGEDPSTRISSSYAPMGAGVV 128 F R +A+ CGSTGWV+S++GVHNW LALF ++AQ++VWG DP T +SSSYAP G Sbjct 64 FGCVRDIAAACGSTGWVASVIGVHNWQLALFPEQAQQDVWGADPGTLMSSSYAPTGTIQE 123 Query 129 VDGGYLVNGSWNWSSGCDHASWTFVGGPVIKDG-RPVDFGSFLIPRSEYEIKDVWYVVGL 187 VDGG+ V G W++SSGCDHA+W +GG V +G P DF +FL+P ++Y I+DVW+ +GL Sbjct 124 VDGGFRVRGRWSFSSGCDHATWVLLGGIVPGEGDAPADFRTFLLPAADYTIEDVWHTIGL 183 Query 188 RGTGSNTLVVKDVFVPRHRFLSYKAMNDHTAGGLATNSAPVYKMPWGTMHPTTISAPIVG 247 RGTGSN +VV D FVP +R LS+ G N P+Y++P+G++ P TI+ PI+G Sbjct 184 RGTGSNDIVVSDAFVPAYRSLSFGDTARCLGPGQELNPGPLYRIPYGSIFPYTITTPIIG 243 Query 248 MAYGAYAAHVEHQGKRVRAAFAGEKAKDDPFAKVRIAEAASDIDAAWRQLIGNVSDEYAL 307 MA G Y AHV H +RVRAA+AG +A +DP+++VR+A AA+D+DAAW L ++++ AL Sbjct 244 MATGMYDAHVTHMRERVRAAYAGVRAAEDPYSQVRVARAAADVDAAWLTLTADMNELMAL 303 Query 308 LAAGKEIPFELRARARRDQVRATGRSIASIDRLFEASGATALSNEAPIQRFWRDAHAGRV 367 AG ++P LR RARR+QVR T +I ++DRLFE SG A+ PIQRFWRDAHAGRV Sbjct 304 ATAGDKLPMRLRLRARRNQVRGTELAIQAVDRLFENSGGRAIYTSHPIQRFWRDAHAGRV 363 Query 368 HAANDPERAYVIFGNHEFGLPPGDTMV 394 HA NDPERA ++G EFGL D MV Sbjct 364 HAINDPERALSMYGCGEFGLSVADAMV 390 >gi|126470055|dbj|BAF48138.1| hypothetical protein [Rhodococcus rhodochrous] Length=388 Score = 388 bits (996), Expect = 1e-105, Method: Compositional matrix adjust. Identities = 187/387 (49%), Positives = 264/387 (69%), Gaps = 1/387 (0%) Query 9 AQSVLAAIDNLLPEIRDRAQATEDLRRLPDETVKALDDVGFFTLLQPQQWGGLQCDPALF 68 A VLAA+ LLP+I ++A ++ RR+PD V AL G F +LQP+++GG + P F Sbjct 2 ADDVLAAVRALLPDIAEQAATIDETRRVPDTVVDALASAGVFRMLQPRRYGGTETAPVRF 61 Query 69 FEATRRLASVCGSTGWVSSIVGVHNWHLALFDQRAQEEVWGEDPSTRISSSYAPMGAGVV 128 +E R ++ VCGSTGWV+S++GVH WHLALFD AQ +VWG+D ST +SS+YAP+G + Sbjct 62 YEVVRAISGVCGSTGWVASVLGVHPWHLALFDDHAQHDVWGDDTSTLVSSAYAPVGRLIP 121 Query 129 VDGGYLVNGSWNWSSGCDHASWTFVGGPVI-KDGRPVDFGSFLIPRSEYEIKDVWYVVGL 187 V+GGY ++G+W +SSGC++ASW +G V +GRPVDF + L+PR++Y I+DVW VVG+ Sbjct 122 VEGGYELSGTWMFSSGCEYASWALLGAVVTGSEGRPVDFMTVLVPRTDYAIRDVWNVVGM 181 Query 188 RGTGSNTLVVKDVFVPRHRFLSYKAMNDHTAGGLATNSAPVYKMPWGTMHPTTISAPIVG 247 RGT SN +VV VFVP +R S ++ G N+ P+Y++P+G++ TT+S PIVG Sbjct 182 RGTASNEIVVDHVFVPEYRVKSNFETSNLRGPGRKVNTGPLYRLPFGSLFGTTVSMPIVG 241 Query 248 MAYGAYAAHVEHQGKRVRAAFAGEKAKDDPFAKVRIAEAASDIDAAWRQLIGNVSDEYAL 307 + G Y ++ +RVR + G + DDPFA+ +A AAS+IDAA Q N+ + + Sbjct 242 VVEGCYEHYLAAMHERVRLSLGGGRFVDDPFAQTSVARAASEIDAAILQTTRNIEELWEC 301 Query 308 LAAGKEIPFELRARARRDQVRATGRSIASIDRLFEASGATALSNEAPIQRFWRDAHAGRV 367 AG+EIP LRARARRDQVRAT R++ +ID LF+ +G ++L ++R WRDAHAG V Sbjct 302 AVAGREIPMMLRARARRDQVRATERAVEAIDLLFKTAGGSSLFLGNIVERAWRDAHAGSV 361 Query 368 HAANDPERAYVIFGNHEFGLPPGDTMV 394 H AN+PERA +G FGLP D ++ Sbjct 362 HVANEPERALAQYGRAAFGLPVEDNLL 388 >gi|325674664|ref|ZP_08154351.1| pigment production hydroxylase [Rhodococcus equi ATCC 33707] gi|325554250|gb|EGD23925.1| pigment production hydroxylase [Rhodococcus equi ATCC 33707] Length=402 Score = 385 bits (988), Expect = 9e-105, Method: Compositional matrix adjust. Identities = 192/385 (50%), Positives = 253/385 (66%), Gaps = 2/385 (0%) Query 3 SIQQRDAQSVLAAIDNLLPEIRDRAQATEDLRRLPDETVKALDDVGFFTLLQPQQWGGLQ 62 ++ R V I +LLP +RDRA E R++ E + L ++G+F LLQP +GG + Sbjct 11 AMGDRQVVDVFDDIRDLLPMLRDRAGQVERDRQISTEVIARLTEIGYFRLLQPHAFGGFE 70 Query 63 CDPALFFEATRRLASVCGSTGWVSSIVGVHNWHLALFDQRAQEEVWGEDPSTRISSSYAP 122 DP ++ A R LA CGSTGWV+S+VGVH W LALFD RAQ +VWG +P T +SS+YAP Sbjct 71 ADPRDYYAAVRSLAGACGSTGWVASVVGVHPWQLALFDVRAQRDVWGANPDTLMSSAYAP 130 Query 123 MGAGVVVDGGYLVNGSWNWSSGCDHASWTFVGGPVIKD-GRPVDFGSFLIPRSEYEIKDV 181 MG + DGG+ +G W++SSG HA W VGG V+ D G P+DF +FLIP +Y I DV Sbjct 131 MGRAIASDGGFFFSGRWSYSSGSAHADWVLVGGLVVDDAGDPIDFRTFLIPARDYRIDDV 190 Query 182 WYVVGLRGTGSNTLVVKDVFVPRHRFLSYKAMNDHTAGGLATNSAPVYKMPWGTMHPTTI 241 W+ VGLRGTGSN LVV+DVFVP +R LS+ + G A N+AP+Y++P+ + TTI Sbjct 191 WHTVGLRGTGSNDLVVEDVFVPDYRTLSFTSTVQCAGPGQAVNTAPLYRLPFSAVFSTTI 250 Query 242 SAPIVGMAYGAYAAHVEHQGKRVRAAFAGEKAKDDPFAKVRIAEAASDIDAAWRQLIGNV 301 +APIVGMA GAY+A +Q R AA + + DD F + +AE+A DI+ AW QL N Sbjct 251 TAPIVGMADGAYSAFTAYQTGRT-AAVSPLRFTDDQFMQAALAESARDIELAWMQLERNF 309 Query 302 SDEYALLAAGKEIPFELRARARRDQVRATGRSIASIDRLFEASGATALSNEAPIQRFWRD 361 S+ A IP LR +ARRDQV A+ ++ +IDRLF+ +G AL +APIQRFWRD Sbjct 310 SEMLDFAHADVRIPVSLRVKARRDQVSASSMAVGAIDRLFDHAGGGALRTDAPIQRFWRD 369 Query 362 AHAGRVHAANDPERAYVIFGNHEFG 386 AHAGR H NDP + V+FG +E G Sbjct 370 AHAGRAHVINDPYQPLVLFGRNELG 394 >gi|312138345|ref|YP_004005681.1| acyl-CoA dehydrogenase [Rhodococcus equi 103S] gi|311887684|emb|CBH46996.1| putative acyl-CoA dehydrogenase [Rhodococcus equi 103S] Length=391 Score = 384 bits (987), Expect = 1e-104, Method: Compositional matrix adjust. Identities = 192/381 (51%), Positives = 251/381 (66%), Gaps = 2/381 (0%) Query 7 RDAQSVLAAIDNLLPEIRDRAQATEDLRRLPDETVKALDDVGFFTLLQPQQWGGLQCDPA 66 R V I +LLP +RDRA E R++ E + L ++G+F LLQP +GG + DP Sbjct 4 RQVVDVFDDIRDLLPMLRDRAGQVERDRQISTEVIARLTEIGYFRLLQPHAFGGFEADPR 63 Query 67 LFFEATRRLASVCGSTGWVSSIVGVHNWHLALFDQRAQEEVWGEDPSTRISSSYAPMGAG 126 ++ A R LA CGSTGWV+S+VGVH W LALFD RAQ +VWG +P T +SS+YAPMG Sbjct 64 DYYAAVRSLAGACGSTGWVASVVGVHPWQLALFDVRAQRDVWGANPDTLMSSAYAPMGRA 123 Query 127 VVVDGGYLVNGSWNWSSGCDHASWTFVGGPVIKD-GRPVDFGSFLIPRSEYEIKDVWYVV 185 + DGG+ +G W++SSG HA W VGG V+ D G P+DF +FLIP +Y I DVW+ V Sbjct 124 IASDGGFFFSGRWSYSSGSAHADWVLVGGLVVDDAGDPIDFRTFLIPARDYRIDDVWHTV 183 Query 186 GLRGTGSNTLVVKDVFVPRHRFLSYKAMNDHTAGGLATNSAPVYKMPWGTMHPTTISAPI 245 GLRGTGSN LVV+DVFVP +R LS+ + G A N+AP+Y++P+ + TTI+API Sbjct 184 GLRGTGSNDLVVEDVFVPDYRTLSFTSTVQCAGPGQAVNTAPLYRLPFSAVFSTTITAPI 243 Query 246 VGMAYGAYAAHVEHQGKRVRAAFAGEKAKDDPFAKVRIAEAASDIDAAWRQLIGNVSDEY 305 VGMA GAY+A +Q R AA + + DD F + +AE+A DI+ AW QL N S+ Sbjct 244 VGMADGAYSAFTAYQTGRT-AAVSPLRFTDDQFMQAALAESARDIELAWMQLERNFSEML 302 Query 306 ALLAAGKEIPFELRARARRDQVRATGRSIASIDRLFEASGATALSNEAPIQRFWRDAHAG 365 A IP LR +ARRDQV A+ ++ +IDRLF+ +G AL +APIQRFWRDAHAG Sbjct 303 DFAHADVRIPVSLRVKARRDQVSASSMAVGAIDRLFDHAGGGALRTDAPIQRFWRDAHAG 362 Query 366 RVHAANDPERAYVIFGNHEFG 386 R H NDP + V+FG +E G Sbjct 363 RAHVINDPYQPLVLFGRNELG 383 >gi|296269608|ref|YP_003652240.1| acyl-CoA dehydrogenase type 2 domain-containing protein [Thermobispora bispora DSM 43833] gi|296092395|gb|ADG88347.1| Acyl-CoA dehydrogenase type 2 domain protein [Thermobispora bispora DSM 43833] Length=402 Score = 384 bits (987), Expect = 1e-104, Method: Compositional matrix adjust. Identities = 187/396 (48%), Positives = 262/396 (67%), Gaps = 3/396 (0%) Query 2 TSIQQRDAQS--VLAAIDNLLPEIRDRAQATEDLRRLPDETVKALDDVGFFTLLQPQQWG 59 TS +++ A S +L + LLPEI +RA ++ RR+P+ETV+ L G F +LQP+++G Sbjct 7 TSTRRKAAMSEEILDTVRTLLPEIAERAVRADESRRIPEETVQELKQAGVFRMLQPKRYG 66 Query 60 GLQCDPALFFEATRRLASVCGSTGWVSSIVGVHNWHLALFDQRAQEEVWGEDPSTRISSS 119 G + DPA FF R ++ CGSTGWV+S++GVH W + LF + AQ+EVWG DP +SSS Sbjct 67 GAESDPARFFAVIREISGACGSTGWVASLMGVHLWQIGLFPEAAQDEVWGADPDALVSSS 126 Query 120 YAPMGAGVVVDGGYLVNGSWNWSSGCDHASWTFVGGPVI-KDGRPVDFGSFLIPRSEYEI 178 YAP+G V+GGY ++G W +SSGCDHASW +G V+ GRPVD + L+PR +Y I Sbjct 127 YAPIGRLTPVEGGYELSGHWRFSSGCDHASWALLGALVLGPQGRPVDVMTVLVPRDDYVI 186 Query 179 KDVWYVVGLRGTGSNTLVVKDVFVPRHRFLSYKAMNDHTAGGLATNSAPVYKMPWGTMHP 238 +DVW V+GLRGTGSN ++V+ FVP HR + + + G N P+Y++P+ T+ Sbjct 187 QDVWDVIGLRGTGSNDIIVERAFVPAHRAMRNAELARPSGPGQEVNPGPLYRVPFATLFT 246 Query 239 TTISAPIVGMAYGAYAAHVEHQGKRVRAAFAGEKAKDDPFAKVRIAEAASDIDAAWRQLI 298 T ++AP++GMA G Y +++E RVR + G + +D FA+V +A AAS+IDAA Q Sbjct 247 TAVTAPLIGMAAGCYRSYIEAMRDRVRLSVDGRRFAEDQFAQVAVARAASEIDAAILQTD 306 Query 299 GNVSDEYALLAAGKEIPFELRARARRDQVRATGRSIASIDRLFEASGATALSNEAPIQRF 358 NV + Y G++IP ELR R RRDQVR T R++ +ID LF+ +G +L PI+R Sbjct 307 RNVREVYECAVRGEDIPRELRLRVRRDQVRGTERALEAIDILFKTAGGNSLKRNNPIERA 366 Query 359 WRDAHAGRVHAANDPERAYVIFGNHEFGLPPGDTMV 394 WRDAHAG VH AND ERA ++G EFGL +T+V Sbjct 367 WRDAHAGSVHVANDVERALAMYGKGEFGLTVEETLV 402 >gi|269127712|ref|YP_003301082.1| Acyl-CoA dehydrogenase type 2 domain-containing protein [Thermomonospora curvata DSM 43183] gi|268312670|gb|ACY99044.1| Acyl-CoA dehydrogenase type 2 domain protein [Thermomonospora curvata DSM 43183] Length=388 Score = 382 bits (980), Expect = 7e-104, Method: Compositional matrix adjust. Identities = 186/387 (49%), Positives = 253/387 (66%), Gaps = 1/387 (0%) Query 9 AQSVLAAIDNLLPEIRDRAQATEDLRRLPDETVKALDDVGFFTLLQPQQWGGLQCDPALF 68 + VL A+ LLP+I +RA++ ++ R+P ET++ L + G F LLQP + GGL+ DP F Sbjct 2 SNEVLEAVRGLLPQIAERARSVDEKGRIPAETIRELTEAGVFRLLQPSRHGGLESDPVDF 61 Query 69 FEATRRLASVCGSTGWVSSIVGVHNWHLALFDQRAQEEVWGEDPSTRISSSYAPMGAGVV 128 + A R ++ CGSTGWV+ ++GVH WHL +F AQ EVW P T ISSSYAP+G Sbjct 62 YRAVRMISGACGSTGWVTGVLGVHAWHLGMFPDEAQREVWSNGPDTLISSSYAPIGRLTP 121 Query 129 VDGGYLVNGSWNWSSGCDHASWTFVGGPVI-KDGRPVDFGSFLIPRSEYEIKDVWYVVGL 187 V+GGY V G W +SSGC+ A W +G V+ +GRPVDF + L+PR +YEI+ VW GL Sbjct 122 VEGGYEVTGRWGFSSGCEFADWALLGALVVGAEGRPVDFMTILLPRRDYEIRQVWDATGL 181 Query 188 RGTGSNTLVVKDVFVPRHRFLSYKAMNDHTAGGLATNSAPVYKMPWGTMHPTTISAPIVG 247 RGT S+ +VVK FVP HR + M A G N+ P+++MP+GT+ TTI++ ++G Sbjct 182 RGTASDDIVVKGAFVPEHRVMRNYDMARLRAPGSKVNTGPLFRMPFGTLFTTTITSSVIG 241 Query 248 MAYGAYAAHVEHQGKRVRAAFAGEKAKDDPFAKVRIAEAASDIDAAWRQLIGNVSDEYAL 307 + G YA +VE R+R + G + +DPFA+V + AAS+IDAA Q NV + YA Sbjct 242 IVAGCYAHYVESMRDRIRLSLGGGRFVEDPFAQVAVGRAASEIDAAVLQTERNVREMYAH 301 Query 308 LAAGKEIPFELRARARRDQVRATGRSIASIDRLFEASGATALSNEAPIQRFWRDAHAGRV 367 AG++IP ELR RARRDQVR T R+I +ID LF+ +G +L I+R WRDAHAG V Sbjct 302 AVAGEKIPMELRLRARRDQVRGTERAIEAIDILFKTAGGNSLHRGHVIERAWRDAHAGSV 361 Query 368 HAANDPERAYVIFGNHEFGLPPGDTMV 394 H ANDPERA ++G EFGL D ++ Sbjct 362 HVANDPERALAMYGRGEFGLKIEDNLL 388 >gi|325673063|ref|ZP_08152757.1| type 2 acyl-CoA dehydrogenase [Rhodococcus equi ATCC 33707] gi|325556316|gb|EGD25984.1| type 2 acyl-CoA dehydrogenase [Rhodococcus equi ATCC 33707] Length=388 Score = 379 bits (974), Expect = 4e-103, Method: Compositional matrix adjust. Identities = 179/386 (47%), Positives = 256/386 (67%), Gaps = 1/386 (0%) Query 10 QSVLAAIDNLLPEIRDRAQATEDLRRLPDETVKALDDVGFFTLLQPQQWGGLQCDPALFF 69 VL ++ LLP I +RAQ ++ RR+ D+T++ L G F +LQP ++GGL+ P F+ Sbjct 3 NEVLQSVRELLPAIAERAQTVDESRRVSDQTIRDLTAAGVFRMLQPARYGGLETSPVDFY 62 Query 70 EATRRLASVCGSTGWVSSIVGVHNWHLALFDQRAQEEVWGEDPSTRISSSYAPMGAGVVV 129 E R ++ VCGSTGWV+S++GVH WHLALFD + Q+EVWG+D ST +SS+YAP+G V V Sbjct 63 EVVRAISGVCGSTGWVTSVLGVHPWHLALFDVKVQDEVWGQDTSTLVSSAYAPVGELVPV 122 Query 130 DGGYLVNGSWNWSSGCDHASWTFVGGPVI-KDGRPVDFGSFLIPRSEYEIKDVWYVVGLR 188 +GGY ++GSW +SSGCDHASW +GG V+ +GRPVDF + L+PR++Y IKDVW VVGLR Sbjct 123 EGGYELSGSWRFSSGCDHASWALLGGLVVGAEGRPVDFMTVLVPRTDYRIKDVWDVVGLR 182 Query 189 GTGSNTLVVKDVFVPRHRFLSYKAMNDHTAGGLATNSAPVYKMPWGTMHPTTISAPIVGM 248 GT SN + V+ FVP +R + G N AP++K+P+ + +T++AP++G Sbjct 183 GTASNEITVERAFVPEYRTIRNYEAAQLRGPGHKVNPAPLFKLPFAAIFTSTVAAPVIGT 242 Query 249 AYGAYAAHVEHQGKRVRAAFAGEKAKDDPFAKVRIAEAASDIDAAWRQLIGNVSDEYALL 308 G Y ++ RVR + G + +D A++ +A A+S+IDAA Q+ N+ + L Sbjct 243 VAGCYETYLSSMRDRVRLSLGGGRFAEDQSAQIAVARASSEIDAAILQMDRNIRELLELA 302 Query 309 AAGKEIPFELRARARRDQVRATGRSIASIDRLFEASGATALSNEAPIQRFWRDAHAGRVH 368 AG+ +P +R R RRDQVR T R++ +ID LF+ +G +L+ PI+R WRDAHAG VH Sbjct 303 EAGQPLPMSMRLRVRRDQVRGTERALEAIDVLFKTAGGNSLTRGNPIERAWRDAHAGSVH 362 Query 369 AANDPERAYVIFGNHEFGLPPGDTMV 394 AND RA ++G FGLP D +V Sbjct 363 VANDAARALAMYGRGAFGLPVEDNLV 388 >gi|312141677|ref|YP_004009013.1| acyl-CoA dehydrogenase [Rhodococcus equi 103S] gi|311891016|emb|CBH50335.1| putative acyl-CoA dehydrogenase [Rhodococcus equi 103S] Length=388 Score = 379 bits (973), Expect = 5e-103, Method: Compositional matrix adjust. Identities = 179/386 (47%), Positives = 256/386 (67%), Gaps = 1/386 (0%) Query 10 QSVLAAIDNLLPEIRDRAQATEDLRRLPDETVKALDDVGFFTLLQPQQWGGLQCDPALFF 69 VL ++ LLP I +RAQ ++ RR+ D+T++ L G F +LQP ++GGL+ P F+ Sbjct 3 NEVLQSVRELLPAIAERAQTVDESRRVSDQTIRDLTAAGVFRMLQPARYGGLETSPVDFY 62 Query 70 EATRRLASVCGSTGWVSSIVGVHNWHLALFDQRAQEEVWGEDPSTRISSSYAPMGAGVVV 129 E R ++ VCGSTGWV+S++GVH WHLALFD + Q+EVWG+D ST +SS+YAP+G V V Sbjct 63 EVVRAISGVCGSTGWVTSVLGVHPWHLALFDVKVQDEVWGQDTSTLVSSAYAPVGELVPV 122 Query 130 DGGYLVNGSWNWSSGCDHASWTFVGGPVI-KDGRPVDFGSFLIPRSEYEIKDVWYVVGLR 188 +GGY ++GSW +SSGCDHASW +GG V+ +GRPVDF + L+PR++Y IKDVW VVGLR Sbjct 123 EGGYELSGSWRFSSGCDHASWALLGGLVVGAEGRPVDFMTVLVPRTDYRIKDVWDVVGLR 182 Query 189 GTGSNTLVVKDVFVPRHRFLSYKAMNDHTAGGLATNSAPVYKMPWGTMHPTTISAPIVGM 248 GT SN + V+ FVP +R + G N AP++K+P+ + +T++AP++G Sbjct 183 GTASNEITVERAFVPEYRTIRNYEAAQLRGPGHKVNPAPLFKLPFAAIFTSTVAAPVIGT 242 Query 249 AYGAYAAHVEHQGKRVRAAFAGEKAKDDPFAKVRIAEAASDIDAAWRQLIGNVSDEYALL 308 G Y ++ RVR + G + +D A++ +A A+S+IDAA Q+ N+ + L Sbjct 243 VAGCYETYLSAMRDRVRLSLGGGRFAEDQSAQIAVARASSEIDAAILQMDRNIRELLELA 302 Query 309 AAGKEIPFELRARARRDQVRATGRSIASIDRLFEASGATALSNEAPIQRFWRDAHAGRVH 368 AG+ +P +R R RRDQVR T R++ +ID LF+ +G +L+ PI+R WRDAHAG VH Sbjct 303 EAGQPLPMSMRLRVRRDQVRGTERALEAIDVLFKTAGGNSLTRGNPIERAWRDAHAGSVH 362 Query 369 AANDPERAYVIFGNHEFGLPPGDTMV 394 AND RA ++G FGLP D +V Sbjct 363 VANDAARALAMYGRGAFGLPVEDNLV 388 >gi|111022775|ref|YP_705747.1| hydroxylase [Rhodococcus jostii RHA1] gi|110822305|gb|ABG97589.1| probable hydroxylase [Rhodococcus jostii RHA1] Length=388 Score = 379 bits (972), Expect = 7e-103, Method: Compositional matrix adjust. Identities = 183/386 (48%), Positives = 257/386 (67%), Gaps = 1/386 (0%) Query 10 QSVLAAIDNLLPEIRDRAQATEDLRRLPDETVKALDDVGFFTLLQPQQWGGLQCDPALFF 69 VL ++ LLP I +RA ++ RR+ ++ ++ L D G F +LQP+++GG + +P F+ Sbjct 3 NEVLGSVRGLLPMIAERADKVDESRRVSEQVIRELGDAGMFKMLQPRRYGGTESNPVHFY 62 Query 70 EATRRLASVCGSTGWVSSIVGVHNWHLALFDQRAQEEVWGEDPSTRISSSYAPMGAGVVV 129 E R ++ VCGSTGW++S++GVH WHLALFD RAQ +VWG D S +SS+YAP+G V V Sbjct 63 EVVRAVSGVCGSTGWLASVLGVHPWHLALFDDRAQRDVWGHDDSVLVSSAYAPVGRLVPV 122 Query 130 DGGYLVNGSWNWSSGCDHASWTFVGGPVIKD-GRPVDFGSFLIPRSEYEIKDVWYVVGLR 188 +GGY + G W++SSGC+HASW +G V+ GRPVDF + L+PRS+Y I DVW VVG+R Sbjct 123 EGGYRLTGDWHFSSGCEHASWALLGAMVVGTAGRPVDFMTALVPRSDYRIHDVWDVVGMR 182 Query 189 GTGSNTLVVKDVFVPRHRFLSYKAMNDHTAGGLATNSAPVYKMPWGTMHPTTISAPIVGM 248 GT SN + +DVFVP +R G N P+Y++P+ T+ TT++AP VG+ Sbjct 183 GTASNEISAEDVFVPDYRIKRNYETAQLRGPGQKVNRGPLYRLPFATLFTTTVAAPGVGV 242 Query 249 AYGAYAAHVEHQGKRVRAAFAGEKAKDDPFAKVRIAEAASDIDAAWRQLIGNVSDEYALL 308 G Y ++ +RVR + G + DD FA+V +A A+S+IDAA Q+ NV + + L Sbjct 243 VAGCYERYLTFMRERVRLSLGGGRFVDDQFAQVAVARASSEIDAAILQMDRNVRELWELA 302 Query 309 AAGKEIPFELRARARRDQVRATGRSIASIDRLFEASGATALSNEAPIQRFWRDAHAGRVH 368 AG+E+P LR R RRDQVRAT R++ +ID LF+ +G ++LS I+R WRDAHAG VH Sbjct 303 EAGEELPMGLRLRVRRDQVRATERALDAIDLLFKTAGGSSLSRGNAIERSWRDAHAGSVH 362 Query 369 AANDPERAYVIFGNHEFGLPPGDTMV 394 AN+PERA +FG FGLP D +V Sbjct 363 VANEPERALALFGRGAFGLPVEDNLV 388 >gi|54025328|ref|YP_119570.1| hypothetical protein nfa33590 [Nocardia farcinica IFM 10152] gi|54016836|dbj|BAD58206.1| hypothetical protein [Nocardia farcinica IFM 10152] Length=387 Score = 378 bits (971), Expect = 8e-103, Method: Compositional matrix adjust. Identities = 184/385 (48%), Positives = 255/385 (67%), Gaps = 0/385 (0%) Query 9 AQSVLAAIDNLLPEIRDRAQATEDLRRLPDETVKALDDVGFFTLLQPQQWGGLQCDPALF 68 + VL + LLP IR+RA + RR+P +T+ L + GFF LLQP+++GG + PA Sbjct 2 SNEVLERVRPLLPAIRERAVEADRQRRVPADTIAELREAGFFRLLQPKRYGGYEASPAAL 61 Query 69 FEATRRLASVCGSTGWVSSIVGVHNWHLALFDQRAQEEVWGEDPSTRISSSYAPMGAGVV 128 +E R LAS C STGWV+++VGVH W ++LFD+RAQ+EVW + P +SSSYAP G V Sbjct 62 YETVRALASACPSTGWVAAVVGVHPWQISLFDERAQDEVWKDTPDALVSSSYAPTGTLVE 121 Query 129 VDGGYLVNGSWNWSSGCDHASWTFVGGPVIKDGRPVDFGSFLIPRSEYEIKDVWYVVGLR 188 VDGGY ++G W++SSG DH W +G ++G+ ++ + L+PRS+Y ++DVW VVGL Sbjct 122 VDGGYRLSGRWSFSSGSDHCQWVLLGTLCFREGQAPEYLTALVPRSDYVVEDVWNVVGLS 181 Query 189 GTGSNTLVVKDVFVPRHRFLSYKAMNDHTAGGLATNSAPVYKMPWGTMHPTTISAPIVGM 248 GTGSN +V++D FVP HR S + G A N+AP+YK+P+G + TI+ IVG Sbjct 182 GTGSNDIVIEDAFVPAHRTYSALEQDQLRGPGHAVNTAPMYKLPFGMVFSYTITNAIVGA 241 Query 249 AYGAYAAHVEHQGKRVRAAFAGEKAKDDPFAKVRIAEAASDIDAAWRQLIGNVSDEYALL 308 A GAY AHV +RVR ++ G+K +D FA VR+A AA +IDAA L NV+++ + Sbjct 242 AQGAYTAHVARMKERVRLSYGGQKVAEDAFAHVRVARAAGEIDAAVATLDQNVAEQLRYV 301 Query 309 AAGKEIPFELRARARRDQVRATGRSIASIDRLFEASGATALSNEAPIQRFWRDAHAGRVH 368 AG+EIP LR RARRDQV T R++ +++ LFE SG +++ PI+R WRD HAG VH Sbjct 302 EAGEEIPERLRLRARRDQVLGTERAVHAVEILFENSGGHSIARGNPIERHWRDVHAGTVH 361 Query 369 AANDPERAYVIFGNHEFGLPPGDTM 393 ND ERA +FG EFG+P + M Sbjct 362 VINDVERALAMFGRGEFGVPIDEGM 386 Lambda K H 0.320 0.135 0.420 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 770431090464 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40